BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037508
(449 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224067236|ref|XP_002302423.1| predicted protein [Populus trichocarpa]
gi|222844149|gb|EEE81696.1| predicted protein [Populus trichocarpa]
Length = 486
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/302 (65%), Positives = 242/302 (80%), Gaps = 3/302 (0%)
Query: 134 KRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE 193
+R WLQD S DL G IVALAKDQ+GC+ LQR + S +E+I+M+F EVID V
Sbjct: 171 RRPPWLQDYV---SWEDLSGKIVALAKDQHGCKFLQRLIESATREQIDMLFYEVIDYVGG 227
Query: 194 LMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNP 253
L+ DPFGNYVVQKL+E+ SEEQRTR+L MLT DFQLVRICL+ HG RAV KLL +TNP
Sbjct: 228 LIADPFGNYVVQKLIEVISEEQRTRVLRMLTRTDFQLVRICLDVHGTRAVQKLLNCITNP 287
Query: 254 QQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGC 313
Q+SLV++AL GAV L KD+NGH+VIQ+ +KHFS +D KY+L +VA+ C+ IAT+KSGC
Sbjct: 288 LQVSLVVSALNQGAVALIKDSNGHHVIQHSMKHFSPQDNKYILKQVAEKCFEIATNKSGC 347
Query: 314 CVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEG 373
CVLQ CVEYS+G R+RLVAEIIANALLLAED YGNYVVQH+L L++PQIT +LL Q EG
Sbjct: 348 CVLQRCVEYSEGEHRDRLVAEIIANALLLAEDHYGNYVVQHILDLKMPQITENLLTQFEG 407
Query: 374 HYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVS 433
Y++ SCNKYGSNVVE+CLL + E+QST+II+ELL +P SMLL+ PFGN+VIQ AL VS
Sbjct: 408 SYMALSCNKYGSNVVEKCLLTTSEDQSTQIILELLSNPGASMLLVDPFGNFVIQKALSVS 467
Query: 434 KV 435
+
Sbjct: 468 QT 469
>gi|224136880|ref|XP_002326968.1| predicted protein [Populus trichocarpa]
gi|222835283|gb|EEE73718.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/291 (65%), Positives = 235/291 (80%)
Query: 144 DCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYV 203
D S DL G +VALAKD YGC+ LQ+ + S +E+I+M+F EVI V L++DPFGNYV
Sbjct: 179 DYLSWEDLSGKVVALAKDPYGCKFLQKLIESATREQIDMLFYEVIGYVGGLIVDPFGNYV 238
Query: 204 VQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL 263
VQKLVE+ SEEQRT IL MLT DFQLVRICL+ HG R V KLL +TNPQQ+S+V++AL
Sbjct: 239 VQKLVEVLSEEQRTGILRMLTRTDFQLVRICLDVHGTRVVQKLLNCITNPQQVSIVVSAL 298
Query: 264 RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
GAV L D+NGH+VIQ+ KHFS ED KY+L +VA+NC+GIAT+KSGCCVLQ CVEYS
Sbjct: 299 SQGAVALITDSNGHHVIQHFFKHFSTEDNKYILKQVAENCFGIATNKSGCCVLQRCVEYS 358
Query: 324 KGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+G R+RL+AEIIANALLLAED YGNYVVQH+L L+ P+IT +LL Q +G Y++ SCNKY
Sbjct: 359 EGEARDRLLAEIIANALLLAEDHYGNYVVQHILKLKSPEITENLLAQFKGSYMALSCNKY 418
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
GSNVVE CLL + EEQST+II+ELLR+P VSMLL+ PFGN+VIQ AL +S+
Sbjct: 419 GSNVVESCLLTTREEQSTQIILELLRNPLVSMLLVDPFGNFVIQKALSISQ 469
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR--VCELMIDPFGNYVVQ 205
L +G+ +AL+ ++YG ++ + + +E+ I +E++ V L++DPFGN+V+Q
Sbjct: 403 LAQFKGSYMALSCNKYGSNVVESCLLTTREEQSTQIILELLRNPLVSMLLVDPFGNFVIQ 462
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
K + + S+ Q R L+ L + Q +R N +G + ++ L +N+
Sbjct: 463 KALSI-SQGQVQRYLVALIQRNAQKMRS--NIYGQKVLVWLNKNM 504
>gi|359492558|ref|XP_003634432.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Vitis
vinifera]
Length = 574
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/299 (62%), Positives = 240/299 (80%), Gaps = 3/299 (1%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTM-SSLPKEEIEMIFVEVIDRVCELM 195
Q+L ++ C L D RG +V LA +Q+GCR LQ + +++ +EIEMIF EVI V +LM
Sbjct: 237 QYLSLNYLC--LEDFRGRVVPLAMNQHGCRFLQEKLQNNVTVKEIEMIFSEVIHHVAQLM 294
Query: 196 IDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ 255
+D FGNYVVQKLVE+C+EEQRT+ILL T + +QL+ ICLN HG R + KLLE LT P+Q
Sbjct: 295 LDQFGNYVVQKLVEICNEEQRTQILLSATTNQYQLIFICLNMHGTRVMQKLLEYLTTPEQ 354
Query: 256 ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCV 315
IS+ ++AL P V LTKDT+GH+VIQ+C+K FS +D YL+ EVA+NC+ IAT++SGCCV
Sbjct: 355 ISIAMSALWPVTVALTKDTSGHHVIQHCLKLFSCQDNMYLIKEVAENCFEIATNRSGCCV 414
Query: 316 LQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHY 375
LQ CVE S+G RE+L+AEIIANAL LAED YGNYVVQHL+ L++P++ +LL+Q EG +
Sbjct: 415 LQSCVENSQGELREQLMAEIIANALPLAEDRYGNYVVQHLMGLKIPEVITNLLKQFEGTF 474
Query: 376 VSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
+S SCNKYGSNVVE+ L+ES +EQS++IIIELLRSPNVSMLL+ PFGN+VIQSAL VSK
Sbjct: 475 ISLSCNKYGSNVVEKFLIESKDEQSSQIIIELLRSPNVSMLLLDPFGNFVIQSALSVSK 533
>gi|255538126|ref|XP_002510128.1| RNA binding protein, putative [Ricinus communis]
gi|223550829|gb|EEF52315.1| RNA binding protein, putative [Ricinus communis]
Length = 542
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 182/295 (61%), Positives = 226/295 (76%), Gaps = 8/295 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +L G I AKDQ+GC+ +++ + ++ E+I+M+ +E+ID V ELM PFGNYVVQKL
Sbjct: 209 LENLMGRIARYAKDQFGCKLVRKALENVTHEKIDMVLLEIIDSVAELMPHPFGNYVVQKL 268
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLE--------NLTNPQQISLV 259
VE+CSEEQRTRILL +T ++ QLV ICLN HG RAV KLLE ++T QQ+SL+
Sbjct: 269 VEVCSEEQRTRILLAVTKNEVQLVSICLNMHGTRAVQKLLEGIASTQQVSITARQQVSLI 328
Query: 260 LAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHC 319
++AL GAV L KD NGH+VI+YC++HF ED KYLL VADNC+ IATDKSGCCVLQ C
Sbjct: 329 MSALSSGAVELAKDMNGHHVIKYCLEHFLPEDNKYLLKVVADNCFDIATDKSGCCVLQQC 388
Query: 320 VEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFS 379
V++S G R+RLVA I AL LA+D YGNYV+QHLL LR P ITA+L RQLEG++ S
Sbjct: 389 VDHSMGEPRDRLVASITNIALRLAQDRYGNYVIQHLLGLRNPLITANLFRQLEGYFAVLS 448
Query: 380 CNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
C+K+GSNVVE+CLLES EQ T+II ELLRSP SMLL+ P+GN+VIQSAL VSK
Sbjct: 449 CDKFGSNVVEKCLLESRAEQCTQIISELLRSPCSSMLLVDPYGNFVIQSALKVSK 503
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 87/224 (38%), Gaps = 52/224 (23%)
Query: 256 ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCV 315
I L L L KD G +++ +++ +HE +L E+ D+ + G V
Sbjct: 205 IPLPLENLMGRIARYAKDQFGCKLVRKALENVTHEKIDMVLLEIIDSVAELMPHPFGNYV 264
Query: 316 LQHCVEYSKGAQRERLVAEIIAN------------------------------------- 338
+Q VE QR R++ + N
Sbjct: 265 VQKLVEVCSEEQRTRILLAVTKNEVQLVSICLNMHGTRAVQKLLEGIASTQQVSITARQQ 324
Query: 339 -----------ALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
A+ LA+D G++V+++ L +P+ LL+ + + + +K G V
Sbjct: 325 VSLIMSALSSGAVELAKDMNGHHVIKYCLEHFLPEDNKYLLKVVADNCFDIATDKSGCCV 384
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHP-FGNYVIQSAL 430
+++C+ S E R++ + N+++ L +GNYVIQ L
Sbjct: 385 LQQCVDHSMGEPRDRLVASI---TNIALRLAQDRYGNYVIQHLL 425
>gi|356518120|ref|XP_003527730.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
max]
Length = 508
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 166/286 (58%), Positives = 220/286 (76%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
DLRG ++ LA DQ+ CR LQ TM L +EE +IF+E+I+ V +LM+DPFGNYVVQ++VE
Sbjct: 181 DLRGRVLLLATDQHECRTLQETMRKLTREEFYIIFLELINHVTDLMVDPFGNYVVQRMVE 240
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
+C+EEQ ++I+L L +FQLVRICL+ HGIR V KLLE +T +Q LVL+AL PGA
Sbjct: 241 ICTEEQLSQIVLSLAQCNFQLVRICLSAHGIRGVEKLLERVTTQEQRDLVLSALCPGAAI 300
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
L KD NGH V+ +C+K FS ED + LLN VA+ C+ IATDK+GC VLQ C+ +++G ++
Sbjct: 301 LAKDVNGHRVLLHCLKQFSGEDNENLLNVVANKCFEIATDKTGCVVLQQCINHAQGETKQ 360
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVE 389
+L+ II + LLAEDCYGNYVVQHLL+L+VP + SLL QL+G + +CNKYGSNVVE
Sbjct: 361 KLLDAIILHVSLLAEDCYGNYVVQHLLSLKVPGVAESLLIQLKGRFFYLACNKYGSNVVE 420
Query: 390 RCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKV 435
R L +SGE+ ST I++ELL +PNV+MLL+ P+GNYVI+SAL SK+
Sbjct: 421 RFLQDSGEKHSTSIVLELLHNPNVAMLLVDPYGNYVIKSALSASKL 466
>gi|356528751|ref|XP_003532961.1| PREDICTED: uncharacterized protein LOC100780898 [Glycine max]
Length = 763
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 151/285 (52%), Positives = 202/285 (70%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+SL + RG I +AKDQ+GCR LQR E++++IF E+ID V ELM++PFGNY++Q
Sbjct: 440 NSLAEARGLIYLIAKDQHGCRFLQRIFDEGTPEDVQVIFNEIIDHVAELMMNPFGNYLMQ 499
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+++C E+QR +I+LM+T + QLVRI LN HG R V KL+E L QQISLV+AAL P
Sbjct: 500 KLLDVCDEKQRMQIILMVTEEPGQLVRISLNIHGTRVVQKLIETLKTRQQISLVVAALEP 559
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
G + L KD NG++V+Q+C++ S+ED K++ A C IAT + GCCVLQ C+ +S+G
Sbjct: 560 GFLALIKDLNGNHVVQHCLQCLSNEDNKFIFVAAAKYCVDIATHQHGCCVLQRCIGHSRG 619
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
RE+LV EI ANALLLA+D +GNYVVQ +L LR+P TA+L Q E YV S K+GS
Sbjct: 620 EHREKLVEEISANALLLAQDQFGNYVVQFILDLRIPSATATLSLQFERKYVHLSMQKFGS 679
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+VVE+CL +E +R+I ELL +P+ LL P NYVIQSAL
Sbjct: 680 HVVEKCLAVFNDENQSRVIHELLSAPHFEQLLQDPHANYVIQSAL 724
>gi|356557551|ref|XP_003547079.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 770
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 149/285 (52%), Positives = 203/285 (71%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+SL + +G I +AKDQ+GCR LQR E++++IF E+ID V ELM++PFGNY++Q
Sbjct: 447 NSLAEAQGLIYLIAKDQHGCRFLQRIFDEGTPEDVQVIFNEIIDHVVELMMNPFGNYLMQ 506
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+++C E QR +++LM+T + QLVRI LNTHG R V K++E L QQISLV+AAL P
Sbjct: 507 KLLDVCDENQRMQMILMVTEEPGQLVRISLNTHGTRVVQKVIETLKTRQQISLVVAALEP 566
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
G + L KD NG++V+Q+C++ S+ED K++ A C IAT + GCCVLQ C+ +S+G
Sbjct: 567 GFLALIKDLNGNHVVQHCLQCLSNEDNKFIFVAAAKYCVDIATHQHGCCVLQRCIGHSRG 626
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
RE+LV EI ANALLLA+D +GNYVVQ +L LR+P TA+L Q EG YV S K+GS
Sbjct: 627 EHREKLVEEISANALLLAQDQFGNYVVQFILDLRIPSATATLSLQFEGKYVHLSMQKFGS 686
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+VVE+CL +E +R+I ELL +P+ LL P NYVIQSA+
Sbjct: 687 HVVEKCLAVFNDENRSRVIHELLSAPHFEQLLQDPHANYVIQSAV 731
>gi|358345510|ref|XP_003636820.1| Pumilio domain-containing protein [Medicago truncatula]
gi|358348879|ref|XP_003638469.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355502755|gb|AES83958.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355504404|gb|AES85607.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 679
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 140/281 (49%), Positives = 207/281 (73%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
+ RG + +LAKD +G + LQ M +L E + F+E+I+ +CELM+DP G V+ K+VE
Sbjct: 211 EFRGRVYSLAKDTHGSKILQEVMENLGPEGVSYFFLELINHMCELMVDPIGYEVITKMVE 270
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
+C+++Q+T+I+L++T+ Q +RICL+ HG R+V KLLE +T +Q L+++AL PGA+
Sbjct: 271 VCNQDQKTQIVLLVTHHGAQFIRICLSLHGSRSVEKLLEKVTTREQRGLIMSALTPGAIV 330
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
L+KD NGH V+ C+K+F H DT+ L +A N ++ DK+GCCVLQ+CV +++GA +
Sbjct: 331 LSKDINGHRVVFNCLKNFPHADTEKFLGVIARNSLSLSRDKTGCCVLQYCVSHAQGATKN 390
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVE 389
L+ EII +A LLAEDCYGNYV+QHL++L++P ++ +L QL+ +VS SCNKYGSNVVE
Sbjct: 391 LLIHEIILHAPLLAEDCYGNYVIQHLISLKIPTVSGNLHHQLQQQFVSLSCNKYGSNVVE 450
Query: 390 RCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ L +SG + S+ IIIELL PNV+ LL P+GN+VI +AL
Sbjct: 451 KFLHDSGVDISSCIIIELLNDPNVTRLLTDPYGNFVISTAL 491
>gi|225448285|ref|XP_002271130.1| PREDICTED: uncharacterized protein LOC100266352 [Vitis vinifera]
Length = 810
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/287 (50%), Positives = 201/287 (70%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+SL + +G+I +AKDQ+GCR LQR +++++IF E+ID V ELM++PFGNY++Q
Sbjct: 487 NSLVEAQGHIYMIAKDQHGCRFLQRMFDEGTPQDVQIIFNEIIDHVVELMMNPFGNYLMQ 546
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+++C+EEQR +IL+MLT + +LVRI LNTHG R V KL+E L QQIS V++AL P
Sbjct: 547 KLLDVCNEEQRMQILVMLTEESGELVRISLNTHGTRVVQKLIETLKTRQQISRVISALEP 606
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
G + L KD NG++VIQ C++ S ED K++ A C IAT + GCCVLQ C+ +S G
Sbjct: 607 GFLALIKDLNGNHVIQRCLQCLSKEDNKFIFVAAAKYCVEIATHQHGCCVLQRCISHSTG 666
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
RE LVAEI +N LLA+D +GNYVVQ +L L++P T++L+ Q EG+YV S ++ S
Sbjct: 667 EYRENLVAEISSNGFLLAQDAFGNYVVQFILELKIPSATSNLIAQFEGNYVHLSTQRFSS 726
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLV 432
+VVE+CL EE +RI+ ELL + + LL HP NYVIQ AL V
Sbjct: 727 HVVEKCLTVCTEENQSRIVHELLSTSHFEQLLQHPHANYVIQKALQV 773
>gi|356512063|ref|XP_003524740.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
max]
Length = 451
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 147/285 (51%), Positives = 201/285 (70%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
SSL + +G I +AKDQ+GCR LQ+ E++ MIF E+ID V ELM++PFGNY++Q
Sbjct: 128 SSLAEAQGYIYLMAKDQHGCRFLQKMFDEGTPEDVLMIFNEIIDHVVELMMNPFGNYLMQ 187
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+++C+EEQR +ILL++T + QLVRI LNTHG R V KL+E L QQISL ++AL P
Sbjct: 188 KLLDVCNEEQRMQILLIITEEPGQLVRISLNTHGTRVVQKLVETLKTRQQISLAVSALEP 247
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
G + L KD NG++V+Q C+ S+ED K++ A C IAT + GCCVLQ C+ +S G
Sbjct: 248 GFLALIKDLNGNHVVQRCLLCLSNEDNKFIFVAAAKYCVDIATHQHGCCVLQRCIGHSSG 307
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
RE+L+AEI ANALLLA+D +GNYVVQ +L L++ +T + Q EG+YV S K+GS
Sbjct: 308 EYREKLIAEICANALLLAQDQFGNYVVQFILDLKISSVTTCIRLQFEGNYVHLSRQKFGS 367
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+VVE+CL +E +R+I+ELL +P+ LL P NYV+QSAL
Sbjct: 368 HVVEKCLAAFNDENRSRVILELLSTPHFEHLLQDPHANYVVQSAL 412
>gi|255564824|ref|XP_002523406.1| RNA binding protein, putative [Ricinus communis]
gi|223537356|gb|EEF38985.1| RNA binding protein, putative [Ricinus communis]
Length = 771
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 140/295 (47%), Positives = 208/295 (70%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+S+ ++ G + +AKDQ+GCR LQR S ++IE IF+EVID + ELM DPFGNY+VQ
Sbjct: 418 NSVDEVTGRVYLMAKDQHGCRFLQRKFSEGTPQDIEKIFLEVIDHIAELMTDPFGNYLVQ 477
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E+C+E+QR +IL +T +LVRI + HG RAV K++E L PQQ S+V+++L+P
Sbjct: 478 KLLEVCNEDQRMQILCAITRKAGELVRISCDMHGTRAVQKVIETLKTPQQFSMVVSSLKP 537
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
G VTL K+ NG++V Q C+++ + E +++L NC +ATD+ GCCVLQ C+ +S+G
Sbjct: 538 GIVTLIKNMNGNHVAQRCLQYLTPEHSEFLFEAATTNCVELATDRHGCCVLQKCLSHSEG 597
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
QR L++EI +NAL+L++D +GNYVVQ + LR+P TA++L QLEG+Y S KY S
Sbjct: 598 EQRRCLISEITSNALILSQDPFGNYVVQFVFELRLPWATANILDQLEGNYGDLSMQKYSS 657
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
NV+E+CL + EE II +L+ + ++ ++ P+GNYVIQ+AL SK L ++
Sbjct: 658 NVIEKCLKYASEEHRAHIIRQLISNTHLDQVMQDPYGNYVIQAALHQSKGALHAA 712
>gi|356528052|ref|XP_003532619.1| PREDICTED: uncharacterized protein LOC100799294 [Glycine max]
Length = 779
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/292 (50%), Positives = 204/292 (69%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
SSL + +G I ++KDQ+GCR LQ+ E++++IF E+ID V E M++PFGNY++Q
Sbjct: 456 SSLAEAQGYIYLMSKDQHGCRFLQKMFDEGTPEDVQVIFNEIIDHVVEPMVNPFGNYLMQ 515
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+++C+EEQR +ILL++T + QLVRI LNTHG R V KL+E L QQISL ++AL P
Sbjct: 516 KLLDVCNEEQRMQILLIITEEPGQLVRISLNTHGTRVVQKLIETLKTRQQISLAVSALEP 575
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
G + L KD NG++V+Q C+ S+ED K++ A C IAT + GCCVLQ C+ +S G
Sbjct: 576 GFLALIKDLNGNHVVQRCLLCLSNEDNKFIFVAAAKYCVDIATHQHGCCVLQRCIGHSNG 635
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
+E+L+AEI ANALLLA+D +GNYVVQ +L L++P TA + Q EG+Y S K+GS
Sbjct: 636 EYQEKLIAEICANALLLAQDQFGNYVVQFILDLKIPSATACIRLQFEGNYAHLSRQKFGS 695
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
+VVE+CL +E +R+I+ELL P+ LL P NYV+QSAL S+ RL
Sbjct: 696 HVVEKCLAVFNDENRSRVILELLSMPHFEHLLQDPHANYVVQSALRHSEGRL 747
>gi|147858798|emb|CAN82911.1| hypothetical protein VITISV_015280 [Vitis vinifera]
Length = 773
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/378 (43%), Positives = 223/378 (58%), Gaps = 51/378 (13%)
Query: 101 LNLLHNHNFDGLRSN----------------------GNELSSVPRNQWMS------SLS 132
LN + N FDG R N ++ S + N W S SL
Sbjct: 263 LNYVINKGFDGSRGNFKGSSAETGVGKSEEKMTQLDGRSQFSGICENGWNSRLYCPFSLP 322
Query: 133 LKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVC 192
K N SL + +G+I +AKDQ+GCR LQR +++++IF E+ID V
Sbjct: 323 PKYN----------SLVEAQGHIYMIAKDQHGCRFLQRMFDEGTPQDVQIIFNEIIDHVV 372
Query: 193 ELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTN 252
ELM++PFGNY++QKL+++C+EEQR +IL+MLT + +LVRI LNTHG R V KL+E L
Sbjct: 373 ELMMNPFGNYLMQKLLDVCNEEQRMQILVMLTEESGELVRISLNTHGTRVVQKLIETLKT 432
Query: 253 PQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDT-------------KYLLNEV 299
QQIS V++AL PG + L KD NG++VIQ C++ S ED K++
Sbjct: 433 RQQISRVISALEPGFLALIKDLNGNHVIQRCLQCLSKEDNKEEMIGQLLTCTKKFIFVAA 492
Query: 300 ADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALR 359
A C IAT + GCCVLQ C+ +S G RE LVAEI +N LLA+D +GNYVVQ +L L+
Sbjct: 493 AKYCVEIATHQHGCCVLQRCISHSTGEYRENLVAEISSNGFLLAQDAFGNYVVQFILELK 552
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMH 419
+P T++L+ Q EG+YV S ++ S+VVE+CL EE +RI+ ELL + + LL H
Sbjct: 553 IPSATSNLIAQFEGNYVHLSTQRFSSHVVEKCLTVCTEENQSRIVHELLSTSHFEQLLQH 612
Query: 420 PFGNYVIQSALLVSKVRL 437
P NYVIQ AL V + +L
Sbjct: 613 PHANYVIQKALQVYEGKL 630
>gi|302756987|ref|XP_002961917.1| hypothetical protein SELMODRAFT_75995 [Selaginella moellendorffii]
gi|300170576|gb|EFJ37177.1| hypothetical protein SELMODRAFT_75995 [Selaginella moellendorffii]
Length = 322
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 140/294 (47%), Positives = 205/294 (69%), Gaps = 2/294 (0%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
SL+++ G I ++AKDQYGCR LQR E+++ IF E+ID + +LM DPFGNY+VQK
Sbjct: 1 SLKEVEGRIYSIAKDQYGCRFLQRRFDEGVAEDLQKIFEEIIDHIVDLMTDPFGNYLVQK 60
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L+E+C+E+QR IL ++ + D +L+ I LN HG RAV KL+E L +P+Q+S++ ++L G
Sbjct: 61 LLEVCTEDQRLEILRVVCSGD-ELISISLNMHGTRAVQKLIETLKSPEQVSMITSSLEQG 119
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
V L KD NG++V+Q C++ +E+ +++ + A +C + T + GCCVLQ CV++SKG
Sbjct: 120 IVILIKDLNGNHVVQRCLQRLGNEENQFIFDAAAQHCVEVGTHRHGCCVLQRCVDFSKGV 179
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q+ERLV EI ANAL+L++D YGNYVVQ++L P I ++ QLEGH+ + K+ SN
Sbjct: 180 QKERLVGEIAANALVLSQDQYGNYVVQYILD-EAPWIAPEVMAQLEGHHAHLAMQKFSSN 238
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
VVE+CL + +++ RII EL +S + LL PF NYVIQ AL V+K L +S
Sbjct: 239 VVEKCLKQGADDKRARIIHELTKSAFLGQLLQDPFANYVIQCALTVTKGALHAS 292
>gi|255545698|ref|XP_002513909.1| conserved hypothetical protein [Ricinus communis]
gi|223546995|gb|EEF48492.1| conserved hypothetical protein [Ricinus communis]
Length = 1204
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 155/354 (43%), Positives = 223/354 (62%), Gaps = 5/354 (1%)
Query: 89 QEAEPINQDSSILNLLHNHNFDGLRSNGNELSSVPRN--QWMSSLSLKRNQWLQDSFDCS 146
+E EP+++D+ +N L+ F R L + N W + + L + +
Sbjct: 826 KECEPLSRDN--MNSLNEIPFQNFRGKSIRLDNCILNGESWENDPRISSYSPLPEVPSIN 883
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
SL +++G I +A+DQ GCR LQR ++I++IF E+ID V ELM+ PFGNYV+QK
Sbjct: 884 SLSEVQGKIYLMAQDQNGCRWLQRIFDEGTSQDIQIIFNEIIDHVVELMLKPFGNYVIQK 943
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
+++C+EEQR +I+ M+T + QL+RICLNT+G RAV KL+E L QQIS V+ ALRPG
Sbjct: 944 FLDVCNEEQRLQIVFMVTEEPGQLLRICLNTYGTRAVQKLIETLKTRQQISFVVMALRPG 1003
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ L KD NG++VIQ C++ ++D K++ + A IAT + GCCV+Q C+ +S G
Sbjct: 1004 FLDLVKDQNGNHVIQRCLQCLHNDDNKFIFDAAAKFSVQIATHRHGCCVMQRCITHSTGK 1063
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
RE+L+ EI NALLLA+D +GNYVVQ+++ L+ P +LL Q HYV S K+ S+
Sbjct: 1064 HREKLITEISKNALLLAQDPFGNYVVQYIVELKNPSAAVNLLSQFRRHYVHLSMQKFSSH 1123
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
VVE+C L+ EE +I+ EL+ LL PF NYVIQSAL V+K L +S
Sbjct: 1124 VVEKC-LKHLEESREQIVHELISVSRFEQLLQDPFANYVIQSALAVTKGPLRAS 1176
>gi|224052863|ref|XP_002297618.1| predicted protein [Populus trichocarpa]
gi|222844876|gb|EEE82423.1| predicted protein [Populus trichocarpa]
Length = 620
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 144/302 (47%), Positives = 205/302 (67%), Gaps = 7/302 (2%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+S+ ++ G I +AKDQ+GCR LQRT S +++E IF+E+ID + ELM DPFGNY+VQ
Sbjct: 290 NSVDEVTGRIYLMAKDQHGCRFLQRTFSEGTPQDVEKIFLEIIDHIVELMTDPFGNYLVQ 349
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E+C+E+QR +IL +T +LVRI + HG RAV K++E L P+Q S+V++AL+P
Sbjct: 350 KLLEVCNEDQRMQILRTITRKAGELVRISCDMHGTRAVQKVIETLKTPEQFSMVVSALKP 409
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
VTL K+ NG++V Q C+++ E +++L NC +ATD+ GCCVLQ C+ SKG
Sbjct: 410 CIVTLIKNMNGNHVAQRCLQYLMPEYSEFLFEATTANCVELATDRHGCCVLQKCLSQSKG 469
Query: 326 AQRERLVAEIIANALLLAEDCYG-------NYVVQHLLALRVPQITASLLRQLEGHYVSF 378
QR LV+EI +NAL+L++D +G NYVVQ + LR+P +L QLEG+Y
Sbjct: 470 EQRRCLVSEITSNALILSQDPFGYCIFLFSNYVVQFVFELRLPWAATDILDQLEGNYGDL 529
Query: 379 SCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLF 438
S KY SNVVE+CL +GE + TRII EL+ + + ++ PFGNYVIQ+AL SK L
Sbjct: 530 SVQKYSSNVVEKCLKYAGEVRRTRIIRELINNSRLDQVMQDPFGNYVIQAALQQSKGALH 589
Query: 439 SS 440
++
Sbjct: 590 AA 591
>gi|302775508|ref|XP_002971171.1| hypothetical protein SELMODRAFT_94948 [Selaginella moellendorffii]
gi|300161153|gb|EFJ27769.1| hypothetical protein SELMODRAFT_94948 [Selaginella moellendorffii]
Length = 321
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/293 (47%), Positives = 204/293 (69%), Gaps = 2/293 (0%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+++ G I ++AKDQYGCR LQR E+++ IF E+ID + +LM DPFGNY+VQKL
Sbjct: 1 LKEVEGRIYSIAKDQYGCRFLQRRFDEGVAEDLQKIFEEIIDHIVDLMTDPFGNYLVQKL 60
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E+C+E+QR IL ++ + D +L+ I LN HG RAV KL+E L +P+Q+S++ ++L G
Sbjct: 61 LEVCTEDQRLEILRVVCSGD-ELISISLNMHGTRAVQKLIETLKSPEQVSMITSSLEQGI 119
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L KD NG++V+Q C++ +E+ +++ + A +C + T + GCCVLQ CV++SKG Q
Sbjct: 120 VILIKDLNGNHVVQRCLQRLGNEENQFIFDAAAQHCVEVGTHRHGCCVLQRCVDFSKGVQ 179
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ERLV EI ANAL+L++D YGNYVVQ++L P I ++ QLEGH+ + K+ SNV
Sbjct: 180 KERLVGEIAANALVLSQDQYGNYVVQYILD-EAPWIAPEVMAQLEGHHAHLAMQKFSSNV 238
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
VE+CL + +++ RII EL +S + LL PF NYVIQ AL V+K L +S
Sbjct: 239 VEKCLKQGADDKRARIIHELTKSAFLGQLLQDPFANYVIQCALTVTKGALHAS 291
>gi|297839687|ref|XP_002887725.1| hypothetical protein ARALYDRAFT_476984 [Arabidopsis lyrata subsp.
lyrata]
gi|297333566|gb|EFH63984.1| hypothetical protein ARALYDRAFT_476984 [Arabidopsis lyrata subsp.
lyrata]
Length = 653
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 139/291 (47%), Positives = 199/291 (68%), Gaps = 1/291 (0%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
D++G + +AKDQ+GCR LQR + +IF EVI V ELM+DPFGNY++QKL++
Sbjct: 336 DIQGYVYLMAKDQHGCRFLQRIFDEGTSADAMIIFNEVIAHVVELMMDPFGNYLMQKLLD 395
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
+C+EEQRT+I+L+ T + QL+RI LN +G R V +L+E + +QISLV +ALRPG +
Sbjct: 396 VCTEEQRTQIVLVATAEPGQLIRISLNAYGTRVVQRLVETIRTGKQISLVKSALRPGFLD 455
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
L KD NG++VIQ C++ S ED K++ + C IAT + GCCVLQ C+ YS QRE
Sbjct: 456 LIKDLNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQRE 515
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVE 389
+L+AEI N+LLLA+D +GNY VQ ++ LR+P A +L QL+GHYV S K+ S++VE
Sbjct: 516 KLIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVE 575
Query: 390 RCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
RCL+ E + +I+ EL+ P+ LL P+ N+VIQ+AL +K + +S
Sbjct: 576 RCLMHCPESR-PQIVRELISVPHFDQLLQDPYANFVIQAALAATKGPIHAS 625
>gi|12324246|gb|AAG52093.1|AC012680_4 putative RNA-binding protein; 42664-44784 [Arabidopsis thaliana]
Length = 626
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 139/286 (48%), Positives = 197/286 (68%), Gaps = 1/286 (0%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
D++G + +AKDQ+GCR LQR + +IF EVI V ELM+DPFGNY++QKL++
Sbjct: 333 DIQGYVYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKLLD 392
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
+C+EEQRT+I+L+ T + QL+RI LN +G R V +L+E + + +QISLV ALRPG +
Sbjct: 393 VCTEEQRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGFLD 452
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
L KD NG++VIQ C++ S ED K++ + C IAT + GCCVLQ C+ YS QRE
Sbjct: 453 LIKDLNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQRE 512
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVE 389
+L+AEI N+LLLA+D +GNY VQ ++ LR+P A +L QL+GHYV S K+ S++VE
Sbjct: 513 KLIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVE 572
Query: 390 RCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKV 435
RCL+ E + +I+ EL+ P+ LL P+ N+VIQ+AL +KV
Sbjct: 573 RCLMHCPESRP-QIVRELVSVPHFDQLLQDPYANFVIQAALAATKV 617
>gi|225459320|ref|XP_002284170.1| PREDICTED: uncharacterized protein LOC100257510 [Vitis vinifera]
Length = 724
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 144/294 (48%), Positives = 198/294 (67%), Gaps = 1/294 (0%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
SL + +G I +LAKD GCR LQR E+++++F E I V ELM++PFGNY++QK
Sbjct: 404 SLAEAQGCIYSLAKDHNGCRFLQRMFDGATVEDVQLVFNETIKHVVELMMNPFGNYLMQK 463
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L ++C+E+QR +I+L LT + +LVRI LN HG R V KL+ L QQISLV+ AL P
Sbjct: 464 LFDVCNEDQRMQIVLALTEEPGELVRISLNAHGTRVVQKLVMTLKTRQQISLVVLALEPY 523
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ LTKD +G++V+Q C+++ S ED K+ + A C IAT + GCCVLQ C+ S G
Sbjct: 524 FLDLTKDHHGNHVVQRCLEYLSCEDIKFFFYDAAKYCVDIATHRHGCCVLQRCITRSTGK 583
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
E+LVAEI AN LLLA+D +GNYV+Q+++ L++P ASL+ Q EG+YV S K+ S+
Sbjct: 584 HGEKLVAEISANGLLLAQDDFGNYVIQYIIELKIPSAIASLMSQFEGNYVHLSMQKFSSH 643
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
VVE+C L+ EE RI+ E L P+ L+ PF NYVIQSAL V+K L +S
Sbjct: 644 VVEKC-LKHLEESRPRIVHEFLSVPHFEQLMQDPFANYVIQSALEVTKGPLHAS 696
>gi|22330712|ref|NP_177940.2| pumilio 7 [Arabidopsis thaliana]
gi|313471413|sp|Q9C9R6.2|PUM7_ARATH RecName: Full=Putative pumilio homolog 7, chloroplastic;
Short=APUM-7; Short=AtPUM7; Flags: Precursor
gi|332197954|gb|AEE36075.1| pumilio 7 [Arabidopsis thaliana]
Length = 650
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 140/291 (48%), Positives = 199/291 (68%), Gaps = 1/291 (0%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
D++G + +AKDQ+GCR LQR + +IF EVI V ELM+DPFGNY++QKL++
Sbjct: 333 DIQGYVYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKLLD 392
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
+C+EEQRT+I+L+ T + QL+RI LN +G R V +L+E + + +QISLV ALRPG +
Sbjct: 393 VCTEEQRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGFLD 452
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
L KD NG++VIQ C++ S ED K++ + C IAT + GCCVLQ C+ YS QRE
Sbjct: 453 LIKDLNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQRE 512
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVE 389
+L+AEI N+LLLA+D +GNY VQ ++ LR+P A +L QL+GHYV S K+ S++VE
Sbjct: 513 KLIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVE 572
Query: 390 RCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
RCL+ E + +I+ EL+ P+ LL P+ N+VIQ+AL +K L +S
Sbjct: 573 RCLMHCPESRP-QIVRELVSVPHFDQLLQDPYANFVIQAALAATKGPLHAS 622
>gi|115488632|ref|NP_001066803.1| Os12g0493900 [Oryza sativa Japonica Group]
gi|77555831|gb|ABA98627.1| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649310|dbj|BAF29822.1| Os12g0493900 [Oryza sativa Japonica Group]
gi|125579396|gb|EAZ20542.1| hypothetical protein OsJ_36154 [Oryza sativa Japonica Group]
Length = 520
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/294 (48%), Positives = 189/294 (64%), Gaps = 1/294 (0%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
SL LRG + +A+DQ+GCR LQ+ + K E++ IF V ELM++PFGNY++QK
Sbjct: 199 SLAGLRGFMYHIARDQHGCRFLQQRLDD-GKREVDFIFAGVARHAVELMVNPFGNYLMQK 257
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L+ +C +EQR I+L LT D F LVRI LN HG RAV KL+E+L ++I LV+ ALRPG
Sbjct: 258 LLAVCDDEQRMAIVLTLTKDPFVLVRISLNVHGTRAVQKLIESLRTREEIQLVVQALRPG 317
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ L KD NG++V+Q C++ F D K + A +C I GCCVLQ C+ S G
Sbjct: 318 FLELIKDPNGNHVVQRCLQSFDANDNKPIFEAAAVHCLDIGMQCHGCCVLQRCIARSGGE 377
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
QRE+LVA I +N LA+D YGNYVVQ+++ L+VP ASL +Q +G Y+ S K+ SN
Sbjct: 378 QREKLVAAIASNGFELAQDAYGNYVVQYVIDLKVPTANASLTKQFQGRYIHLSMQKFSSN 437
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
VVE+CL E II+ELL P+ LL HPF NYVI SA+ SK L S+
Sbjct: 438 VVEKCLKVFKEADKATIILELLAVPHFEQLLQHPFANYVIYSAIQNSKGSLHSA 491
>gi|297845242|ref|XP_002890502.1| hypothetical protein ARALYDRAFT_335467 [Arabidopsis lyrata subsp.
lyrata]
gi|297336344|gb|EFH66761.1| hypothetical protein ARALYDRAFT_335467 [Arabidopsis lyrata subsp.
lyrata]
Length = 525
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 140/299 (46%), Positives = 203/299 (67%), Gaps = 2/299 (0%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
+ +G + +AKDQ+GCR LQR + +IF EVI V ELM+DPFGNY++QKL++
Sbjct: 208 EFQGYVYLMAKDQHGCRFLQRIFEDGSALDAMVIFNEVIPHVVELMMDPFGNYLMQKLLD 267
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
+C+EEQRT+I+LM+T++ QL+RI LN +G R V +L+E++ +QISLV ALRPG +
Sbjct: 268 VCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISLVKLALRPGFLN 327
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
L +D NG++VIQ C+K S +D +++ + C IAT + GCCVLQ C+ YS G QRE
Sbjct: 328 LIRDLNGNHVIQRCLKCLSTKDNEFIFEDATKFCIDIATHRHGCCVLQKCIAYSSGLQRE 387
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVE 389
+LV EI N+L LA+D YGNY VQ +L LR A++L QL+GHYV S K+ S++VE
Sbjct: 388 KLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQKFSSHMVE 447
Query: 390 RCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSSPPISVCKP 448
RCL E + +I+ EL+ P+ +L+ P+ N+VIQ+AL V+K L ++ + V +P
Sbjct: 448 RCLTHCPESR-PQIVRELISVPHFDILIQDPYANFVIQAALAVTKGSLHAT-LVEVIRP 504
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
Query: 296 LNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHL 355
++E Y +A D+ GC LQ E + E+I + + L D +GNY++Q L
Sbjct: 206 VSEFQGYVYLMAKDQHGCRFLQRIFEDGSALDAMVIFNEVIPHVVELMMDPFGNYLMQKL 265
Query: 356 LALRVPQITASLLRQLE---GHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
L + + ++ + G + S N YG+ VV+R L+ES + + +++L P
Sbjct: 266 LDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQR-LVESIKTRKQISLVKLALRPG 324
Query: 413 VSMLLMHPFGNYVIQSAL 430
L+ GN+VIQ L
Sbjct: 325 FLNLIRDLNGNHVIQRCL 342
>gi|302783855|ref|XP_002973700.1| hypothetical protein SELMODRAFT_53500 [Selaginella moellendorffii]
gi|300158738|gb|EFJ25360.1| hypothetical protein SELMODRAFT_53500 [Selaginella moellendorffii]
Length = 316
Score = 277 bits (708), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 139/293 (47%), Positives = 202/293 (68%), Gaps = 1/293 (0%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G I AKDQ+GCR LQ+ S EEI+ IF EVID + +LM DPFGNY+VQKL
Sbjct: 1 LEEIEGRIYETAKDQHGCRFLQKKFSEGSLEEIDKIFAEVIDHLVDLMTDPFGNYLVQKL 60
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E+ ++ QR IL ++T + +LV I LN HG RAV KL+E L +P+Q+S+V ++L G
Sbjct: 61 LEVSNDTQRREILRVVTRNG-ELVNISLNMHGTRAVQKLIETLKSPEQVSMVTSSLMQGV 119
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
VTL KD+NG++V+Q C++ S+ED +++++ A +C I T + GCCVLQ C++++ G Q
Sbjct: 120 VTLIKDSNGNHVVQKCLQKLSNEDIQFIIDAAARHCVDIGTHRHGCCVLQRCIDFASGTQ 179
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
LV+EI ANAL+L++D YGNYVVQ++L L IT ++ +LEG++ + K+ SNV
Sbjct: 180 CHFLVSEIAANALILSQDQYGNYVVQYILDLEQSWITLDVIYRLEGNFALLAMQKFSSNV 239
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
VE+CL +S E+ II E++ S +S LL PF NYVIQ AL V+K L ++
Sbjct: 240 VEKCLKQSSEDSRALIIREIITSSLLSQLLQDPFANYVIQCALSVAKGSLHTA 292
>gi|168015525|ref|XP_001760301.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688681|gb|EDQ75057.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 347
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/289 (47%), Positives = 194/289 (67%), Gaps = 1/289 (0%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+ L ++ G I +AKDQ+GCR LQ+ E+++ IF E+I + ELM DPFGNY+VQ
Sbjct: 25 TKLDEVEGRIYLIAKDQHGCRFLQKKFDEGGPEDVQKIFYEIIGHITELMKDPFGNYLVQ 84
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E+C E QR IL ++T D +LV+I LN HG RAV KL+E L +P Q+++V+ AL
Sbjct: 85 KLLEVCDESQRMEILRVVTTDG-ELVKISLNMHGTRAVQKLIETLKSPDQVTMVITALTE 143
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
G V L KD NG++V+Q C++ SHED++++ + A +C IAT + GCCV+Q CV+++
Sbjct: 144 GVVELIKDLNGNHVVQRCLQKLSHEDSQFIFDAAAAHCVEIATHRHGCCVMQRCVDFASA 203
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
Q++RLVA I ANAL L++D YGNYVVQ++L L+ T+ ++ +LEG Y + K+ S
Sbjct: 204 PQKQRLVAVIAANALTLSQDPYGNYVVQYILDLKQGWATSEVMLRLEGSYAFLAMQKFSS 263
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
NVVE+CL EE R++ EL S + LL + NYVIQSAL V K
Sbjct: 264 NVVEKCLKLGVEEHRGRLVRELTASSRLGQLLQDQYANYVIQSALSVCK 312
>gi|15219849|ref|NP_173643.1| protein pumilio 8 [Arabidopsis thaliana]
gi|313471411|sp|Q9LM20.2|PUM8_ARATH RecName: Full=Putative pumilio homolog 8, chloroplastic;
Short=APUM-8; Short=AtPUM8; Flags: Precursor
gi|332192094|gb|AEE30215.1| protein pumilio 8 [Arabidopsis thaliana]
Length = 515
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/301 (46%), Positives = 204/301 (67%), Gaps = 2/301 (0%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ + +G + +AKDQ+GCR LQ + +IF EVI V ELM+DPFGNY++QKL
Sbjct: 196 VSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNYLMQKL 255
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+++C+EEQRT+I+LM+T++ QL+RI LN +G R V +L+E++ +QISLV +ALRPG
Sbjct: 256 LDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISLVKSALRPGF 315
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ L +D NG++VIQ C++ S ED +++ + C IAT + GCCVLQ C+ YS G Q
Sbjct: 316 LNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAYSSGLQ 375
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
RE+LV EI N+L LA+D YGNY VQ +L LR A++L QL+GHYV S K+ S++
Sbjct: 376 REKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQKFSSHM 435
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSSPPISVCK 447
VERCL E + +I+ EL+ P+ +L+ P+ N+VIQ+AL V+K L ++ + V +
Sbjct: 436 VERCLTHCPESR-PQIVRELISVPHFDILIQDPYANFVIQAALAVTKGSLHAT-LVEVIR 493
Query: 448 P 448
P
Sbjct: 494 P 494
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 103/249 (41%), Gaps = 52/249 (20%)
Query: 237 THGIRAVLKLLENL---TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTK 293
HG V L ++ +NP + ++ + + KD +G +Q+ + S D
Sbjct: 170 VHGKSGVGALFDHQGISSNPNESLPKVSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDAL 229
Query: 294 YLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANA---LLLAEDCYGNY 350
+ +EV + + D G ++Q ++ QR +++ + + + ++ + YG
Sbjct: 230 VIFSEVIPHVVELMMDPFGNYLMQKLLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTR 289
Query: 351 VVQHLL--------------ALRVPQITASLLRQLEGHYVSFSC---------------- 380
VVQ L+ ALR + +L+R L G++V C
Sbjct: 290 VVQRLVESIKTRKQISLVKSALRPGFL--NLIRDLNGNHVIQRCLQCLSTEDNEFIFEDA 347
Query: 381 ---------NKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALL 431
+++G V+++C+ S Q +++ E+ R N L P+GNY +Q
Sbjct: 348 TKFCIDIATHRHGCCVLQKCIAYSSGLQREKLVTEISR--NSLFLAQDPYGNYAVQ---F 402
Query: 432 VSKVRLFSS 440
V ++R FS+
Sbjct: 403 VLELRDFSA 411
>gi|9454526|gb|AAF87849.1|AC073942_3 Contains similarity to RNA binding protein PufA from Dictyostelium
discoideum gi|5106561 and contains multiple
Pumilio-family RNA binding PF|00806 domains [Arabidopsis
thaliana]
Length = 514
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/301 (46%), Positives = 204/301 (67%), Gaps = 2/301 (0%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ + +G + +AKDQ+GCR LQ + +IF EVI V ELM+DPFGNY++QKL
Sbjct: 195 VSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNYLMQKL 254
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+++C+EEQRT+I+LM+T++ QL+RI LN +G R V +L+E++ +QISLV +ALRPG
Sbjct: 255 LDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISLVKSALRPGF 314
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ L +D NG++VIQ C++ S ED +++ + C IAT + GCCVLQ C+ YS G Q
Sbjct: 315 LNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAYSSGLQ 374
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
RE+LV EI N+L LA+D YGNY VQ +L LR A++L QL+GHYV S K+ S++
Sbjct: 375 REKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQKFSSHM 434
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSSPPISVCK 447
VERCL E + +I+ EL+ P+ +L+ P+ N+VIQ+AL V+K L ++ + V +
Sbjct: 435 VERCLTHCPESR-PQIVRELISVPHFDILIQDPYANFVIQAALAVTKGSLHAT-LVEVIR 492
Query: 448 P 448
P
Sbjct: 493 P 493
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 103/249 (41%), Gaps = 52/249 (20%)
Query: 237 THGIRAVLKLLENL---TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTK 293
HG V L ++ +NP + ++ + + KD +G +Q+ + S D
Sbjct: 169 VHGKSGVGALFDHQGISSNPNESLPKVSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDAL 228
Query: 294 YLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANA---LLLAEDCYGNY 350
+ +EV + + D G ++Q ++ QR +++ + + + ++ + YG
Sbjct: 229 VIFSEVIPHVVELMMDPFGNYLMQKLLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTR 288
Query: 351 VVQHLL--------------ALRVPQITASLLRQLEGHYVSFSC---------------- 380
VVQ L+ ALR + +L+R L G++V C
Sbjct: 289 VVQRLVESIKTRKQISLVKSALRPGFL--NLIRDLNGNHVIQRCLQCLSTEDNEFIFEDA 346
Query: 381 ---------NKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALL 431
+++G V+++C+ S Q +++ E+ R N L P+GNY +Q
Sbjct: 347 TKFCIDIATHRHGCCVLQKCIAYSSGLQREKLVTEISR--NSLFLAQDPYGNYAVQ---F 401
Query: 432 VSKVRLFSS 440
V ++R FS+
Sbjct: 402 VLELRDFSA 410
>gi|242083470|ref|XP_002442160.1| hypothetical protein SORBIDRAFT_08g015290 [Sorghum bicolor]
gi|241942853|gb|EES15998.1| hypothetical protein SORBIDRAFT_08g015290 [Sorghum bicolor]
Length = 562
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 192/294 (65%), Gaps = 1/294 (0%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
SL LRG + +A+DQ+GCR LQ+ + K E++ IF V +LM+DPFGNY++QK
Sbjct: 241 SLAGLRGVMSHIARDQHGCRLLQQRLDD-GKREVDHIFAGVSRHAAQLMVDPFGNYLMQK 299
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L+ +C QR ++L LT D F LVRI LN HG RAV KL+E+L ++ISLV+ ALRPG
Sbjct: 300 LLAVCDAGQRMALVLTLTADAFVLVRISLNVHGTRAVQKLIESLRTREEISLVIDALRPG 359
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ L KD NG++V+Q C++ F +D K + + A +C I GCCVLQ C+ S+G
Sbjct: 360 FLELIKDPNGNHVVQKCLQAFEADDNKAIFDAAALHCLDIGMQCHGCCVLQRCIARSRGE 419
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
R++LVA I N LA+D YGNYVVQ+++ L++P +SL +Q EG Y+ S K+ SN
Sbjct: 420 HRDKLVAAIAGNGFKLAQDAYGNYVVQYVIDLKIPNANSSLAQQFEGKYIHLSMQKFSSN 479
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
VVE+CL E +II+E+L +P++ LL HP+ NYVI SAL SK L S+
Sbjct: 480 VVEKCLKVFKEVDKAKIILEILATPHLEQLLQHPYANYVIYSALQNSKGSLHSA 533
>gi|302787963|ref|XP_002975751.1| hypothetical protein SELMODRAFT_53499 [Selaginella moellendorffii]
gi|300156752|gb|EFJ23380.1| hypothetical protein SELMODRAFT_53499 [Selaginella moellendorffii]
Length = 316
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/293 (47%), Positives = 201/293 (68%), Gaps = 1/293 (0%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G I AKDQ+GCR LQ+ S EEI+ IF EVID + +LM DPFGNY+VQKL
Sbjct: 1 LEEIEGRIYETAKDQHGCRFLQKKFSEGSLEEIDKIFAEVIDHLVDLMTDPFGNYLVQKL 60
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E+ ++ QR IL +T + +LV I LN HG RAV KL+E L +P+Q+S+V ++L G
Sbjct: 61 LEVSNDTQRREILRGVTRNG-ELVNISLNMHGTRAVQKLIETLKSPEQVSMVTSSLMQGV 119
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
VTL KD+NG++V+Q C++ S+ED +++++ A +C I T + GCCVLQ C++++ G Q
Sbjct: 120 VTLIKDSNGNHVVQKCLQKLSNEDIQFIIDAAARHCVDIGTHRHGCCVLQRCIDFASGTQ 179
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
LV+EI ANAL+L++D YGNYVVQ++L L IT ++ +LEG++ + K+ SNV
Sbjct: 180 CHFLVSEIAANALILSQDQYGNYVVQYILDLEQSWITLDVIYRLEGNFALLAMQKFSSNV 239
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
VE+CL +S E+ II E++ S +S LL PF NYVIQ AL V+K L ++
Sbjct: 240 VEKCLKQSSEDSRALIIREIITSSLLSQLLQDPFANYVIQCALSVAKGSLHTA 292
>gi|168003728|ref|XP_001754564.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694185|gb|EDQ80534.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 361
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 135/289 (46%), Positives = 194/289 (67%), Gaps = 1/289 (0%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+ L ++ G I +AKDQ+GCR LQ+ E+++ IF E+I + ELM DPFGNY+VQ
Sbjct: 39 TKLEEVEGRIYLIAKDQHGCRFLQKKFDEGGHEDVQKIFHEIIGHITELMKDPFGNYLVQ 98
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E+C E QR IL ++T D +LV+I LN HG RAV KL+E L +P+Q+++V+ AL
Sbjct: 99 KLLEVCDESQRMEILRVVTMDG-ELVKISLNMHGTRAVQKLIETLKSPEQVTMVITALTE 157
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
G V L KD NG++V+Q C++ HED++++ + A +C IAT + GCCV+Q CV+++
Sbjct: 158 GVVELIKDLNGNHVVQRCLQKLCHEDSQFIFDAAAAHCVEIATHRHGCCVMQRCVDFASA 217
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
Q++RLVA I ANAL L++D YGNYVVQ++L L+ T+ ++ +LEG Y + K+ S
Sbjct: 218 PQKQRLVAVIAANALALSQDPYGNYVVQYILDLKQGWATSEVMVRLEGSYAFLAMQKFSS 277
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
NVVE+CL EE R++ EL S + LL + NYVIQSAL V K
Sbjct: 278 NVVEKCLKLGMEENRGRLVRELTASSRLGQLLQDQYANYVIQSALSVCK 326
>gi|326496705|dbj|BAJ98379.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 484
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 139/294 (47%), Positives = 190/294 (64%), Gaps = 1/294 (0%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
SL LRG + +A+DQ+GCR LQ+ + K E++ IF V +LM++PFGNY++QK
Sbjct: 163 SLVGLRGYMYHVARDQHGCRFLQQRLDD-GKREVDFIFTGVARHAVDLMVNPFGNYLMQK 221
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L+ +CSEEQR I+L LT + F LVRI LN HG RAV KL+E+L ++I LV+AALRPG
Sbjct: 222 LLAVCSEEQRMGIVLTLTKEPFVLVRISLNVHGTRAVQKLIESLKAREEIQLVVAALRPG 281
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ L KD NG++V+Q C++ F +D K + + A C I GCCVLQ C+ S G
Sbjct: 282 FLELIKDPNGNHVVQKCLQSFGADDNKPIFDAAAIYCLDIGMQCHGCCVLQRCIARSTGE 341
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+E+LVA I N LA+D YGNYVVQ+++ L+V ASL +Q EG Y+ S K+ SN
Sbjct: 342 HKEKLVAAIARNGFELAQDAYGNYVVQYVIELKVAAANASLAQQFEGKYIHLSMQKFSSN 401
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
VVE+CL E II++LL +P LL+HP+ NYV+ +AL SK L S+
Sbjct: 402 VVEKCLKVFKEADKANIILQLLAAPQFERLLLHPYANYVVYAALQNSKGSLHSA 455
>gi|225435792|ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vinifera]
Length = 711
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/289 (45%), Positives = 195/289 (67%), Gaps = 2/289 (0%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+S+ ++ G I ++KDQ GCR LQR + E+++ IF+E+ID + ELM DPFGNY+VQ
Sbjct: 390 NSVDEVVGRIYHMSKDQNGCRFLQRKFTDGSPEDVQKIFLEIIDHIVELMTDPFGNYLVQ 449
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E+C+E+Q+ +IL +T LVRI N HG RAV K++E L +Q S+++++L+P
Sbjct: 450 KLLEVCTEDQQMQILHAITRRAGDLVRISCNMHGTRAVQKVIETLRTSEQFSMIVSSLKP 509
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
G VTL KD NG++V Q C+++ E ++L NC +ATD+ GCCVLQ C+ +S
Sbjct: 510 GIVTLIKDMNGNHVAQCCLQNLMPEYREFLFEAAITNCVELATDRHGCCVLQKCLGHSAV 569
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
QR+R++ EI +NAL+L++D +GNYVVQ++ P +L QLEG+Y S KY S
Sbjct: 570 EQRDRIIYEITSNALILSQDPFGNYVVQYVFEF--PWAIVDILDQLEGNYGDLSLQKYSS 627
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
NVVE+CL +G+E II EL+ +P + ++ P+GNYVIQ+AL SK
Sbjct: 628 NVVEKCLQHAGDEHRHCIIQELINNPRIDQIMQDPYGNYVIQAALNNSK 676
>gi|297746500|emb|CBI16556.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/289 (45%), Positives = 195/289 (67%), Gaps = 2/289 (0%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+S+ ++ G I ++KDQ GCR LQR + E+++ IF+E+ID + ELM DPFGNY+VQ
Sbjct: 401 NSVDEVVGRIYHMSKDQNGCRFLQRKFTDGSPEDVQKIFLEIIDHIVELMTDPFGNYLVQ 460
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E+C+E+Q+ +IL +T LVRI N HG RAV K++E L +Q S+++++L+P
Sbjct: 461 KLLEVCTEDQQMQILHAITRRAGDLVRISCNMHGTRAVQKVIETLRTSEQFSMIVSSLKP 520
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
G VTL KD NG++V Q C+++ E ++L NC +ATD+ GCCVLQ C+ +S
Sbjct: 521 GIVTLIKDMNGNHVAQCCLQNLMPEYREFLFEAAITNCVELATDRHGCCVLQKCLGHSAV 580
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
QR+R++ EI +NAL+L++D +GNYVVQ++ P +L QLEG+Y S KY S
Sbjct: 581 EQRDRIIYEITSNALILSQDPFGNYVVQYVFEF--PWAIVDILDQLEGNYGDLSLQKYSS 638
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
NVVE+CL +G+E II EL+ +P + ++ P+GNYVIQ+AL SK
Sbjct: 639 NVVEKCLQHAGDEHRHCIIQELINNPRIDQIMQDPYGNYVIQAALNNSK 687
>gi|225441625|ref|XP_002276886.1| PREDICTED: uncharacterized protein LOC100250413 [Vitis vinifera]
Length = 815
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 133/295 (45%), Positives = 197/295 (66%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+S+ ++ G I +AKDQ GCR LQR M+ E+IE IF+E++ V ELM PFGNY+VQ
Sbjct: 492 NSVDEVTGRIYLMAKDQSGCRFLQRKMTEGNAEDIEKIFLEIVGHVVELMTHPFGNYLVQ 551
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E+CSE+QRT+I+ +T L+ + +N HG R+V K++E + +P+Q +V+A+L+P
Sbjct: 552 KLLEVCSEDQRTQIVFAITAKAGDLLTVSINMHGTRSVQKVIETIKSPEQFLMVVASLKP 611
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
G V L KD NG++V + C++H ++L V+ +C +ATD GC VLQ C+ +S G
Sbjct: 612 GIVNLIKDLNGYHVAECCLQHLMPGYIEFLFEAVSAHCVELATDCHGCRVLQKCLGHSDG 671
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
R RL++ IIANAL+L++D +GNYVVQ++ L +L QLEG+Y S KY S
Sbjct: 672 EHRLRLLSAIIANALILSQDPFGNYVVQYVFELEGSWARTEVLNQLEGYYRYLSMQKYSS 731
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
NVVE+CL +GEE+ RII E + P + +++ P+ NYVIQ+AL SK L ++
Sbjct: 732 NVVEKCLKYAGEERFARIIQEFMDHPQLDQMMLDPYANYVIQTALNHSKGALHAA 786
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 113/246 (45%), Gaps = 9/246 (3%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPK-EEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELC 211
G+++ ++ + +G R +Q+ + ++ E+ M+ + + L+ D G +V E C
Sbjct: 574 GDLLTVSINMHGTRSVQKVIETIKSPEQFLMVVASLKPGIVNLIKDLNGYHVA----ECC 629
Query: 212 SEE-QRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ I + V + + HG R + K L + ++ L L+A+ A+ L
Sbjct: 630 LQHLMPGYIEFLFEAVSAHCVELATDCHGCRVLQKCLGHSDGEHRLRL-LSAIIANALIL 688
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
++D G+YV+QY + +LN++ ++ K V++ C++Y+ + R
Sbjct: 689 SQDPFGNYVVQYVFELEGSWARTEVLNQLEGYYRYLSMQKYSSNVVEKCLKYAGEERFAR 748
Query: 331 LVAEIIANALL--LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
++ E + + L + D Y NYV+Q L + A+LL + H + N YG V+
Sbjct: 749 IIQEFMDHPQLDQMMLDPYANYVIQTALNHSKGALHAALLEAIRPHIPALRTNPYGKKVL 808
Query: 389 ERCLLE 394
C L+
Sbjct: 809 SSCGLK 814
>gi|147861285|emb|CAN81897.1| hypothetical protein VITISV_009053 [Vitis vinifera]
Length = 815
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 133/295 (45%), Positives = 197/295 (66%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+S+ ++ G I +AKDQ GCR LQR M+ E+IE IF+E++ V ELM PFGNY+VQ
Sbjct: 492 NSVDEVTGRIYLMAKDQSGCRFLQRKMTEGNAEDIEKIFLEIVGHVVELMTHPFGNYLVQ 551
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E+CSE+QRT+I+ +T L+ + +N HG R+V K++E + +P+Q +V+A+L+P
Sbjct: 552 KLLEVCSEDQRTQIVFAITAKAGDLLTVSINMHGTRSVQKVIETIKSPEQFLMVVASLKP 611
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
G V L KD NG++V + C++H ++L V+ +C +ATD GC VLQ C+ +S G
Sbjct: 612 GIVNLIKDLNGYHVAECCLQHLMPGYIEFLFEAVSAHCVELATDCHGCRVLQKCLGHSDG 671
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
R RL++ IIANAL+L++D +GNYVVQ++ L +L QLEG+Y S KY S
Sbjct: 672 EHRLRLLSAIIANALILSQDPFGNYVVQYVFELEGSWARTEVLNQLEGYYRYLSMQKYSS 731
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
NVVE+CL +GEE+ RII E + P + +++ P+ NYVIQ+AL SK L ++
Sbjct: 732 NVVEKCLKYAGEERFARIIQEFMDHPQLDQMMLDPYANYVIQTALNHSKGALHAA 786
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 113/246 (45%), Gaps = 9/246 (3%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPK-EEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELC 211
G+++ ++ + +G R +Q+ + ++ E+ M+ + + L+ D G +V E C
Sbjct: 574 GDLLTVSINMHGTRSVQKVIETIKSPEQFLMVVASLKPGIVNLIKDLNGYHVA----ECC 629
Query: 212 SEE-QRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ I + V + + HG R + K L + ++ L L+A+ A+ L
Sbjct: 630 LQHLMPGYIEFLFEAVSAHCVELATDCHGCRVLQKCLGHSDGEHRLRL-LSAIIANALIL 688
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
++D G+YV+QY + +LN++ ++ K V++ C++Y+ + R
Sbjct: 689 SQDPFGNYVVQYVFELEGSWARTEVLNQLEGYYRYLSMQKYSSNVVEKCLKYAGEERFAR 748
Query: 331 LVAEIIANALL--LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
++ E + + L + D Y NYV+Q L + A+LL + H + N YG V+
Sbjct: 749 IIQEFMDHPQLDQMMLDPYANYVIQTALNHSKGALHAALLEAIRPHIPALRTNPYGKKVL 808
Query: 389 ERCLLE 394
C L+
Sbjct: 809 SSCGLK 814
>gi|147789082|emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera]
Length = 1051
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 132/289 (45%), Positives = 195/289 (67%), Gaps = 2/289 (0%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+S+ ++ G I ++KDQ GCR LQR + E+++ IF+E+ID + ELM DPFGNY+VQ
Sbjct: 431 NSVDEVVGRIYHMSKDQNGCRFLQRKFTDGSPEDVQKIFLEIIDHIVELMTDPFGNYLVQ 490
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E+C+E+Q+ +IL +T LVRI N HG RAV K++E L +Q S+++++L+P
Sbjct: 491 KLLEVCTEDQQMQILHAITRRAGDLVRISCNMHGTRAVQKVIETLRTSEQFSMIVSSLKP 550
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
G VTL KD NG++V Q C+++ E ++L NC +ATD+ GCCVLQ C+ +S
Sbjct: 551 GIVTLIKDMNGNHVAQCCLQNLMPEYREFLXEAAITNCVELATDRHGCCVLQKCLGHSAV 610
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
QR+R++ EI +NAL+L++D +GNYVVQ++ P +L QLEG+Y S KY S
Sbjct: 611 EQRDRIIYEITSNALILSQDPFGNYVVQYVFEF--PWAIVDILDQLEGNYGDLSLQKYSS 668
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
NVVE+CL +G+E II EL+ +P + ++ P+GNYVIQ+AL SK
Sbjct: 669 NVVEKCLQHAGDEHRHCIIQELINNPRIDQIMQDPYGNYVIQAALNNSK 717
>gi|224063219|ref|XP_002301047.1| predicted protein [Populus trichocarpa]
gi|222842773|gb|EEE80320.1| predicted protein [Populus trichocarpa]
Length = 327
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 194/294 (65%), Gaps = 1/294 (0%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+SL + RG + +A+DQ GC LQ+ +++E+IF E+I + ELM+ PFGNYVVQ
Sbjct: 6 TSLNEFRGYVYLMAQDQNGCLFLQKIFEEGTSQDVELIFDEIIGHIVELMLKPFGNYVVQ 65
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+++C E+ R I+ M+TN+ LVRICLNT+G R V +L+E L QQIS V+ AL+P
Sbjct: 66 KLLDVCDEKHRLLIVRMITNEPGMLVRICLNTYGTRVVQRLIETLKTRQQISSVILALKP 125
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
G + L KD NG++VIQ C+ S+ED K++ + C IAT + GCCV+Q C+ ++ G
Sbjct: 126 GVLDLVKDQNGNHVIQRCLNLLSNEDNKFIFDAATKFCVEIATHRHGCCVMQRCIAHATG 185
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
++L+ EI N LLLA+D +GNYVVQ+++ L+ A LL Q +G+YV S K+GS
Sbjct: 186 KHWDKLMTEISRNGLLLAQDPFGNYVVQYIMDLKNSCSIAILLSQFKGNYVHLSMQKFGS 245
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFS 439
+VVERC L EE ++I++ELL P LL PF NYVIQ AL V+K L S
Sbjct: 246 HVVERC-LGHFEESRSQIVLELLSVPRFEQLLQDPFANYVIQCALAVTKGALHS 298
>gi|297793151|ref|XP_002864460.1| APUM12 [Arabidopsis lyrata subsp. lyrata]
gi|297310295|gb|EFH40719.1| APUM12 [Arabidopsis lyrata subsp. lyrata]
Length = 598
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 132/289 (45%), Positives = 197/289 (68%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+SL + RG I LAKDQ+GCR LQR + +IEMIF E+ID + ELMIDPFGNY+VQ
Sbjct: 275 NSLAEARGKIYYLAKDQHGCRFLQRIFAEKDGNDIEMIFDEIIDYISELMIDPFGNYLVQ 334
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E+C+E+QR +I+ +T L++I + HG RAV K++E ++IS++++AL+
Sbjct: 335 KLLEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISIIISALKH 394
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
G V L K+ NG++V+Q C+++ K+L +C +ATD+ GCCVLQ C+ YS+G
Sbjct: 395 GIVNLIKNVNGNHVVQRCLQYLLPHCGKFLFEAAITHCVDLATDRHGCCVLQKCLGYSEG 454
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
Q++ LV+EI +NALLL++D +GNYV+Q++ L++ T +L QLEG+Y S K S
Sbjct: 455 EQKQHLVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSS 514
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
NVVE+CL + ++ RII EL+ + +++ P+GNYVIQ+AL SK
Sbjct: 515 NVVEKCLKLADDKHRARIIRELINYGRLDQVMLDPYGNYVIQAALRQSK 563
>gi|297739756|emb|CBI29938.3| unnamed protein product [Vitis vinifera]
Length = 714
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 133/295 (45%), Positives = 197/295 (66%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+S+ ++ G I +AKDQ GCR LQR M+ E+IE IF+E++ V ELM PFGNY+VQ
Sbjct: 391 NSVDEVTGRIYLMAKDQSGCRFLQRKMTEGNAEDIEKIFLEIVGHVVELMTHPFGNYLVQ 450
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E+CSE+QRT+I+ +T L+ + +N HG R+V K++E + +P+Q +V+A+L+P
Sbjct: 451 KLLEVCSEDQRTQIVFAITAKAGDLLTVSINMHGTRSVQKVIETIKSPEQFLMVVASLKP 510
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
G V L KD NG++V + C++H ++L V+ +C +ATD GC VLQ C+ +S G
Sbjct: 511 GIVNLIKDLNGYHVAECCLQHLMPGYIEFLFEAVSAHCVELATDCHGCRVLQKCLGHSDG 570
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
R RL++ IIANAL+L++D +GNYVVQ++ L +L QLEG+Y S KY S
Sbjct: 571 EHRLRLLSAIIANALILSQDPFGNYVVQYVFELEGSWARTEVLNQLEGYYRYLSMQKYSS 630
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
NVVE+CL +GEE+ RII E + P + +++ P+ NYVIQ+AL SK L ++
Sbjct: 631 NVVEKCLKYAGEERFARIIQEFMDHPQLDQMMLDPYANYVIQTALNHSKGALHAA 685
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 113/246 (45%), Gaps = 9/246 (3%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPK-EEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELC 211
G+++ ++ + +G R +Q+ + ++ E+ M+ + + L+ D G +V E C
Sbjct: 473 GDLLTVSINMHGTRSVQKVIETIKSPEQFLMVVASLKPGIVNLIKDLNGYHVA----ECC 528
Query: 212 SEE-QRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ I + V + + HG R + K L + ++ L L+A+ A+ L
Sbjct: 529 LQHLMPGYIEFLFEAVSAHCVELATDCHGCRVLQKCLGHSDGEHRLRL-LSAIIANALIL 587
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
++D G+YV+QY + +LN++ ++ K V++ C++Y+ + R
Sbjct: 588 SQDPFGNYVVQYVFELEGSWARTEVLNQLEGYYRYLSMQKYSSNVVEKCLKYAGEERFAR 647
Query: 331 LVAEIIANALL--LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
++ E + + L + D Y NYV+Q L + A+LL + H + N YG V+
Sbjct: 648 IIQEFMDHPQLDQMMLDPYANYVIQTALNHSKGALHAALLEAIRPHIPALRTNPYGKKVL 707
Query: 389 ERCLLE 394
C L+
Sbjct: 708 SSCGLK 713
>gi|356510185|ref|XP_003523820.1| PREDICTED: uncharacterized protein LOC100784921 [Glycine max]
Length = 653
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 145/330 (43%), Positives = 206/330 (62%), Gaps = 18/330 (5%)
Query: 111 GLRSNGNELSSVPRNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQR 170
G RS G + SS+P D S+ D + I LAKDQ GCR LQR
Sbjct: 314 GQRSGGGDFSSLPM-----------------LLDFYSVPDAQCYIYNLAKDQNGCRFLQR 356
Query: 171 TMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQL 230
+ ++I ++F +I V ELMID FGNY+VQKL+++C+++Q +I+L+LTN QL
Sbjct: 357 MVDEGTYQDICIVFEGIIGNVVELMIDSFGNYLVQKLLDVCTDDQLLQIVLLLTNHPTQL 416
Query: 231 VRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHE 290
VRI LNTHG R V KL+E LT+ +Q+SLV +A++PG + L KD NG++VIQ C++ FS +
Sbjct: 417 VRISLNTHGTRVVQKLIETLTSDEQVSLVKSAIQPGFLDLIKDLNGNHVIQRCLQCFSCQ 476
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
D +++ + C IAT + GCCVLQ C+ +S G R++LV EI + LLLA+D +GNY
Sbjct: 477 DNQFIFDAAVKFCVEIATHRHGCCVLQCCIHHSTGKNRDKLVTEICKHGLLLAQDAFGNY 536
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
VVQ+++ P ++ LL Q +G +V S K+ S+VVE+CL G + RI+ EL
Sbjct: 537 VVQYVIESDTPAVSVKLLSQFKGSFVILSTQKFSSHVVEKCLKHIGNSRP-RIVGELTSV 595
Query: 411 PNVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
P LL P+ NYVI+SALL +K L +S
Sbjct: 596 PRFEQLLQDPYANYVIRSALLFTKGPLHAS 625
>gi|212275350|ref|NP_001130994.1| uncharacterized protein LOC100192099 [Zea mays]
gi|194690654|gb|ACF79411.1| unknown [Zea mays]
gi|413916502|gb|AFW56434.1| maternal protein pumilio [Zea mays]
Length = 479
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 143/328 (43%), Positives = 199/328 (60%), Gaps = 10/328 (3%)
Query: 113 RSNGNELSSVPRNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTM 172
R NG+ +++ P+ K + SL LRG + +A+DQ+GCR LQ+ +
Sbjct: 133 RKNGSVMTTSPK---------KCGAAAAAKWHGESLAGLRGVMYHMARDQHGCRLLQQRL 183
Query: 173 SSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVR 232
K E++ IF V +LM+DPFGNY++QKL+ +C + QR ++L LT D F LVR
Sbjct: 184 DD-GKREVDYIFAGVSRHAAQLMVDPFGNYLMQKLLAVCDDGQRMTLVLTLTADPFALVR 242
Query: 233 ICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDT 292
I LN HG RAV KL+E L+ ++I LV+ ALRPG + L KDTNG++V+Q C+ F+ D
Sbjct: 243 ISLNVHGTRAVQKLIERLSAREEIGLVMDALRPGFLELIKDTNGNHVVQKCLHSFASNDN 302
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
K + A +C I GCCVLQ C+ S+G R++LVA I N LAED YGNYVV
Sbjct: 303 KAIFAAAALHCVDIGMQIHGCCVLQRCIARSRGEHRDKLVAAIAHNGFKLAEDAYGNYVV 362
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q +L L++P +SL +Q G Y+ S K+ SNVVE+CL E +II+ELL +P+
Sbjct: 363 QVVLDLKIPTANSSLAQQFGGKYIHLSMQKFSSNVVEKCLKVFKEVDKAKIILELLATPH 422
Query: 413 VSMLLMHPFGNYVIQSALLVSKVRLFSS 440
+ LL H + NYV+ SAL SK L S+
Sbjct: 423 LEQLLPHCYANYVVYSALKNSKGSLHSA 450
>gi|22327888|ref|NP_200462.2| pumilio 12 [Arabidopsis thaliana]
gi|313471423|sp|Q9LVC3.2|PUM12_ARATH RecName: Full=Pumilio homolog 12; Short=APUM-12; Short=AtPUM12
gi|332009392|gb|AED96775.1| pumilio 12 [Arabidopsis thaliana]
Length = 596
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/311 (43%), Positives = 204/311 (65%)
Query: 124 RNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMI 183
+NQ L++ N +S+ + RG I LAKDQ+GCR LQR S +IEMI
Sbjct: 251 QNQLNEDLTMSLNNLSLQPQKYNSIAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMI 310
Query: 184 FVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAV 243
F E+ID + ELM+DPFGNY+VQKL+E+C+E+QR +I+ +T L++I + HG RAV
Sbjct: 311 FNEIIDYISELMMDPFGNYLVQKLLEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAV 370
Query: 244 LKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNC 303
K++E ++IS++++AL+ G V L K+ NG++V+Q C+++ K+L +C
Sbjct: 371 QKIVETAKREEEISIIISALKHGIVHLIKNVNGNHVVQRCLQYLLPYCGKFLFEAAITHC 430
Query: 304 YGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQI 363
+ATD+ GCCVLQ C+ YS+G Q++ LV+EI +NALLL++D +GNYV+Q++ L++
Sbjct: 431 VELATDRHGCCVLQKCLGYSEGEQKQHLVSEIASNALLLSQDPFGNYVLQYVFELQLQWA 490
Query: 364 TASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGN 423
T +L QLEG+Y S K SNVVE+CL + ++ RII EL+ + +++ P+GN
Sbjct: 491 TFEILEQLEGNYTELSMQKCSSNVVEKCLKLADDKHRARIIRELINYGRLDQVMLDPYGN 550
Query: 424 YVIQSALLVSK 434
YVIQ+AL SK
Sbjct: 551 YVIQAALKQSK 561
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 95/251 (37%), Gaps = 42/251 (16%)
Query: 217 TRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
+++ D+ Q R+ L + L NL+ Q +A R L KD +G
Sbjct: 232 AKVIKYGAGDESQNGRLWLQNQLNEDLTMSLNNLSLQPQKYNSIAEARGKIYYLAKDQHG 291
Query: 277 HYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV---- 332
+Q D + + NE+ D + D G ++Q +E QR ++V
Sbjct: 292 CRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLVQKLLEVCNEDQRMQIVHSIT 351
Query: 333 -------------------------------AEIIANALL-----LAEDCYGNYVVQHLL 356
II +AL L ++ GN+VVQ L
Sbjct: 352 RKPGLLIKISCDMHGTRAVQKIVETAKREEEISIIISALKHGIVHLIKNVNGNHVVQRCL 411
Query: 357 ALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSML 416
+P L H V + +++G V+++CL S EQ ++ E+ + N +L
Sbjct: 412 QYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEGEQKQHLVSEI--ASNALLL 469
Query: 417 LMHPFGNYVIQ 427
PFGNYV+Q
Sbjct: 470 SQDPFGNYVLQ 480
>gi|449493600|ref|XP_004159369.1| PREDICTED: uncharacterized LOC101212397 [Cucumis sativus]
Length = 746
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/297 (44%), Positives = 198/297 (66%), Gaps = 8/297 (2%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
C+SL + G I +AKDQ+GCR LQR S KE+IEMIF E+I V ELM+DPFGNY++
Sbjct: 415 CNSLDEATGKIYLMAKDQHGCRFLQRMFSEGTKEDIEMIFGEIIHHVSELMVDPFGNYLI 474
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QKL+ +C E+QR +IL + N +L+RI N HG RAV KL+E L P+Q SL+++ L+
Sbjct: 475 QKLLGVCDEDQRLQILYKI-NRPGELIRISCNMHGTRAVQKLIETLKTPEQFSLIVSLLK 533
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDT-KYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
G V L K+ NG++V Q+C+++ + K+L + +C +ATD+ GCCVLQ C+ S
Sbjct: 534 TGIVILMKNVNGNHVAQHCLQYLMPDYIGKFLFDAATKSCVEVATDRHGCCVLQKCLAVS 593
Query: 324 KGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALR-----VPQITASLLRQLEGHYVSF 378
R+RL++E++ NAL+L++D YGNYVVQ L L +P +T+ + ++LEGH+
Sbjct: 594 DARHRDRLLSEVVRNALVLSQDQYGNYVVQFALELARCPSILPWVTSGIFKRLEGHFSDL 653
Query: 379 SCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKV 435
S KY SNVVERC+ +G+E +++ EL+ S ++++P+GNY +Q+ L S +
Sbjct: 654 SIQKYSSNVVERCVY-AGDEYLAKVVDELINDERFSQIMLNPYGNYAVQAVLARSGI 709
>gi|449452777|ref|XP_004144135.1| PREDICTED: uncharacterized protein LOC101212397 [Cucumis sativus]
Length = 746
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/297 (44%), Positives = 198/297 (66%), Gaps = 8/297 (2%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
C+SL + G I +AKDQ+GCR LQR S KE+IEMIF E+I V ELM+DPFGNY++
Sbjct: 415 CNSLDEATGKIYLMAKDQHGCRFLQRMFSEGTKEDIEMIFGEIIHHVSELMVDPFGNYLI 474
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QKL+ +C E+QR +IL + N +L+RI N HG RAV KL+E L P+Q SL+++ L+
Sbjct: 475 QKLLGVCDEDQRLQILYKI-NRPGELIRISCNMHGTRAVQKLIETLKTPEQFSLIVSLLK 533
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDT-KYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
G V L K+ NG++V Q+C+++ + K+L + +C +ATD+ GCCVLQ C+ S
Sbjct: 534 TGIVILMKNVNGNHVAQHCLQYLMPDYIGKFLFDAATKSCVEVATDRHGCCVLQKCLAVS 593
Query: 324 KGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALR-----VPQITASLLRQLEGHYVSF 378
R+RL++E++ NAL+L++D YGNYVVQ L L +P +T+ + ++LEGH+
Sbjct: 594 DARHRDRLLSEVVRNALVLSQDQYGNYVVQFALELARCPSILPWVTSGIFKRLEGHFSDL 653
Query: 379 SCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKV 435
S KY SNVVERC+ +G+E +++ EL+ S ++++P+GNY +Q+ L S +
Sbjct: 654 SIQKYSSNVVERCVY-AGDEYLAKVVDELINDERFSQIMLNPYGNYAVQAVLARSGI 709
>gi|195635993|gb|ACG37465.1| maternal protein pumilio [Zea mays]
Length = 479
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/328 (43%), Positives = 199/328 (60%), Gaps = 10/328 (3%)
Query: 113 RSNGNELSSVPRNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTM 172
R NG+ +++ P+ K + SL LRG + +A+DQ+GCR LQ+ +
Sbjct: 133 RKNGSVMTTSPK---------KCGAAAAAKWHGESLAGLRGVMYHMARDQHGCRLLQQRL 183
Query: 173 SSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVR 232
K E++ IF V +LM+DPFGNY++QKL+ +C + QR ++L LT D F LVR
Sbjct: 184 DD-GKREVDYIFAGVSRHAAQLMVDPFGNYLMQKLLAVCDDGQRMTLVLTLTADPFALVR 242
Query: 233 ICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDT 292
I LN HG RAV KL+E L+ ++I LV+ ALRPG + L KDTNG++V+Q C+ F+ D
Sbjct: 243 ISLNVHGTRAVQKLIERLSAREEIGLVMDALRPGFLELIKDTNGNHVVQKCLHSFASNDN 302
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
K + A +C I GCCVLQ C+ S+G R++LVA I N LA+D YGNYVV
Sbjct: 303 KAIFAAAALHCVDIGMQIHGCCVLQRCIARSRGEHRDKLVAAIAHNGFKLAQDAYGNYVV 362
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q +L L++P +SL +Q G Y+ S K+ SNVVE+CL E +II+ELL +P+
Sbjct: 363 QVVLDLKIPTANSSLAQQFGGKYIHLSMQKFSSNVVEKCLKVFKEVDKAKIILELLATPH 422
Query: 413 VSMLLMHPFGNYVIQSALLVSKVRLFSS 440
+ LL H + NYV+ SAL SK L S+
Sbjct: 423 LEQLLPHCYANYVVYSALKNSKGSLHSA 450
>gi|357152596|ref|XP_003576172.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like
[Brachypodium distachyon]
Length = 506
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 186/294 (63%), Gaps = 1/294 (0%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
SL LRG + +A+DQ+GCR LQ+ + K E++ +F V +LM++PFGNY++QK
Sbjct: 185 SLVGLRGYMYHVARDQHGCRFLQQRLDD-GKREVDFVFAGVARHAVDLMVNPFGNYLMQK 243
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L+ +C EQR ++ LT D F LVRI LN HG RAV KL+E+L ++I LV+AALRPG
Sbjct: 244 LLAVCDREQRMALVRALTKDPFVLVRISLNVHGTRAVQKLIESLRTREEIQLVVAALRPG 303
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ L KD NG++V+Q C++ F +D K + A C I GCCVLQ C+ S G
Sbjct: 304 FLELIKDPNGNHVVQKCLQAFEADDNKPIFAAAAIYCLDIGMQCHGCCVLQRCIARSTGE 363
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+E+LVA I N LA+D YGNYVVQ+++ L+V ASL +Q EG Y+ S K+ SN
Sbjct: 364 HKEKLVAAIARNGFELAQDAYGNYVVQYVIELKVATANASLAQQFEGKYIHLSMQKFSSN 423
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
VVE+CL E II+ELL +P+ LL HP+ NYV+ SAL SK L S+
Sbjct: 424 VVEKCLKVFKEADKATIILELLAAPHFERLLQHPYANYVVYSALQNSKGSLHSA 477
>gi|356518481|ref|XP_003527907.1| PREDICTED: putative pumilio homolog 10-like [Glycine max]
Length = 668
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 158/412 (38%), Positives = 236/412 (57%), Gaps = 18/412 (4%)
Query: 40 PNTSLNEKSYF----DETDLSAYFSHLNVNDRIFDNPVHHFPLVENGFFSHPCQEAEPIN 95
PN ++ Y+ ++ +LS + S + I ++P F NG F
Sbjct: 236 PNANITPSHYYVAAKEKAELSPFLSPRRI---IGEDPAAAFRCDNNGVFLQGRDAKHYFE 292
Query: 96 QDSSILNLLHNHNFDGLRSNGNELSSVPRNQWMSSLSLKRNQWLQDSF-------DCSSL 148
+ ++ D + G SV R + SS + Q F D S+
Sbjct: 293 NEYGSYRRSPRYDDDAIHGVGR---SVVRKNFYSSAAAPSGQRSGGDFSSVPMLQDFYSV 349
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
D + I +AKDQ GCR LQR ++ ++I M+F +I V ELMID FGNY+VQKL+
Sbjct: 350 PDAQCYIYNMAKDQNGCRFLQRMVAEGTYQDICMVFEGIIGNVVELMIDSFGNYLVQKLL 409
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
++C+++QR +I+LMLTN QLVR+ LNTHG R V KL+E LT+ +Q+SLV +A++PG +
Sbjct: 410 DVCTDDQRLQIVLMLTNHPAQLVRVSLNTHGTRVVQKLIETLTSTEQVSLVKSAIQPGFL 469
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L KD NG+++IQ C++ S +D +++ + C IAT + GC VLQ C+ +S G R
Sbjct: 470 DLIKDLNGNHLIQRCLQCLSCQDNQFIFDAAVKFCVEIATHQHGCFVLQRCIHHSVGKNR 529
Query: 329 ERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
++LV EI + LLLA+D +GNYVVQ+++ ++A LL Q + ++V S K+ S+VV
Sbjct: 530 DKLVTEICKHGLLLAQDAFGNYVVQYVIESDTAAVSAKLLSQFKENFVMLSTQKFSSHVV 589
Query: 389 ERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
E+CL G+ +S RI+ ELL P LL + NYVIQSALL +K L +S
Sbjct: 590 EKCLQHIGDSRS-RIVRELLSVPRFEQLLQDQYANYVIQSALLFTKGPLHAS 640
>gi|297809067|ref|XP_002872417.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318254|gb|EFH48676.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 540
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 137/307 (44%), Positives = 204/307 (66%), Gaps = 3/307 (0%)
Query: 129 SSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
S+ + + L D +S+ D+ G++ +AKDQ GCR LQ+ + ++ ++F EVI
Sbjct: 236 STKTFFKEDSLDLPLDLASMVDIYGSVCLMAKDQLGCRFLQKFVGEGRFVDVMIVFKEVI 295
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLE 248
+ + EL IDPFGNY +QKL+E+C+EEQRT+IL+ LT+ L++I +N +G R V KL+E
Sbjct: 296 NHIAELGIDPFGNYFIQKLLEVCNEEQRTQILIRLTSKPGLLIKISINNYGTRVVQKLIE 355
Query: 249 NLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIAT 308
+T +QISLV +AL PG ++L ++ NG++VI C+K F D K++L C IAT
Sbjct: 356 TVTTKEQISLVKSALVPGFLSLVRELNGNHVILNCLKFFGPNDNKFILEAAIKFCTEIAT 415
Query: 309 DKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLL 368
+ GCCVLQ CV YS G Q E+LV EI N+LLLA+D YGNYVVQ+++ +V + +++
Sbjct: 416 HRHGCCVLQRCVSYSVGEQHEKLVGEISRNSLLLAQDPYGNYVVQYIIEKKVGGV--NVM 473
Query: 369 RQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQS 428
+L G+YV + K+GS+VVE+C+ E +S +I+ EL+ PN L+ P+ NYVIQS
Sbjct: 474 FELRGNYVKLATQKFGSHVVEKCIRFYPESRS-QIVHELVSVPNFEQLVQDPYANYVIQS 532
Query: 429 ALLVSKV 435
AL +KV
Sbjct: 533 ALSKTKV 539
>gi|255085754|ref|XP_002505308.1| predicted protein [Micromonas sp. RCC299]
gi|226520577|gb|ACO66566.1| predicted protein [Micromonas sp. RCC299]
Length = 336
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/300 (45%), Positives = 193/300 (64%), Gaps = 6/300 (2%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
S+ + G + LA+DQ+GCR LQR +E + + F E+I V +LM+DPFGNY+VQ
Sbjct: 6 GSVEECVGQVGVLARDQHGCRFLQRKFDEEGEEAVNLCFEEIIAEVVDLMMDPFGNYLVQ 65
Query: 206 KLVELCSEEQRTRILLMLTNDDF---QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
KL+E C++EQR +L + D +LV + LNTHG RAV KL+E L P+Q++L A
Sbjct: 66 KLLECCTDEQRMGVLRAVAKDGDGVPELVSVALNTHGTRAVQKLVETLRTPEQVALATEA 125
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L+PG VTL KD NG++VIQ C++ ED +++ + C IAT + GCCVLQ C+++
Sbjct: 126 LKPGVVTLIKDLNGNHVIQRCLQRLGAEDNQFVYDAARKCCVEIATHRHGCCVLQRCIDH 185
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ QR LV EI A AL+L++D +GNYVVQ++L L +P A ++ +L G+Y S K
Sbjct: 186 AADGQRRALVQEIAAQALVLSQDPFGNYVVQYILDLSLPWANAEVMMRLAGNYAELSMQK 245
Query: 383 YGSNVVERCLL---ESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFS 439
+ SNVVE+CL S EE ++ E++ SP + LLM P+GNYV+QS L V+K L S
Sbjct: 246 FSSNVVEKCLKLADASLEEHRNVVVREIMTSPLLDRLLMDPYGNYVVQSTLSVTKGALHS 305
>gi|449452779|ref|XP_004144136.1| PREDICTED: pumilio homolog 12-like [Cucumis sativus]
Length = 698
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 127/285 (44%), Positives = 191/285 (67%), Gaps = 1/285 (0%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+S+ ++RG I +AKDQ+GCR LQR E+IE IF E+IDRV ELM+D FGNY+VQ
Sbjct: 376 NSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQ 435
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E+C++ QR +IL +T + +LV I + HG RA+ K++E L +Q+ ++++AL+
Sbjct: 436 KLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKS 495
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
G VTL K+ NG++V Q+C+ + + L + ++C +A D+ GCCVLQ C+ S
Sbjct: 496 GIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDS 555
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
R+ L+ EI NAL++++D YGNYVVQ +L L + T ++L+QLEG+Y S KY S
Sbjct: 556 TDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSS 615
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
NVVE+CL +G Q T+I++EL+ P ++ P+GNY IQ+AL
Sbjct: 616 NVVEKCLQFAG-GQITKIVLELINDPRFDKIMQDPYGNYAIQTAL 659
>gi|449493598|ref|XP_004159368.1| PREDICTED: pumilio homolog 12-like [Cucumis sativus]
Length = 731
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 127/285 (44%), Positives = 191/285 (67%), Gaps = 1/285 (0%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+S+ ++RG I +AKDQ+GCR LQR E+IE IF E+IDRV ELM+D FGNY+VQ
Sbjct: 409 NSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQ 468
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E+C++ QR +IL +T + +LV I + HG RA+ K++E L +Q+ ++++AL+
Sbjct: 469 KLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKS 528
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
G VTL K+ NG++V Q+C+ + + L + ++C +A D+ GCCVLQ C+ S
Sbjct: 529 GIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDS 588
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
R+ L+ EI NAL++++D YGNYVVQ +L L + T ++L+QLEG+Y S KY S
Sbjct: 589 TDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSS 648
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
NVVE+CL +G Q T+I++EL+ P ++ P+GNY IQ+AL
Sbjct: 649 NVVEKCLQFAG-GQITKIVLELINDPRFDKIMQDPYGNYAIQTAL 692
>gi|7267527|emb|CAB78009.1| putative protein [Arabidopsis thaliana]
gi|7321073|emb|CAB82120.1| putative protein [Arabidopsis thaliana]
Length = 524
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 139/296 (46%), Positives = 200/296 (67%), Gaps = 3/296 (1%)
Query: 140 QDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPF 199
+DS D +S+ D G++ +AKDQ GCR LQ+ + ++ +IF EVI+ V EL DPF
Sbjct: 231 EDSLDLASMVDSYGSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPF 290
Query: 200 GNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLV 259
GNY++QKL+E+C+EEQRT+IL+ LT+ LV+I +N +G R V KL+E +T +QISLV
Sbjct: 291 GNYLIQKLIEVCNEEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQISLV 350
Query: 260 LAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHC 319
+AL PG ++L ++ NG++VI C+K FS D K++L C IAT + GCCVLQ C
Sbjct: 351 KSALVPGFLSLFRELNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQRC 410
Query: 320 VEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFS 379
V YS G Q E+LV EI N+LLLA+D +GNY+VQ+++ +V + ++L +L G+YV +
Sbjct: 411 VSYSVGEQHEKLVDEISRNSLLLAQDPFGNYLVQYIIEKKVGGV--NVLFELRGNYVKLA 468
Query: 380 CNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKV 435
K+GS+VVE+CL E +S +I+ EL+ N LL P+ NYVIQ AL +KV
Sbjct: 469 TQKFGSHVVEKCLRYYPESRS-QIVNELVSVLNFGYLLQDPYANYVIQCALSKTKV 523
>gi|8809626|dbj|BAA97177.1| unnamed protein product [Arabidopsis thaliana]
Length = 604
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/319 (42%), Positives = 204/319 (63%), Gaps = 8/319 (2%)
Query: 124 RNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMI 183
+NQ L++ N +S+ + RG I LAKDQ+GCR LQR S +IEMI
Sbjct: 251 QNQLNEDLTMSLNNLSLQPQKYNSIAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMI 310
Query: 184 FVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAV 243
F E+ID + ELM+DPFGNY+VQKL+E+C+E+QR +I+ +T L++I + HG RAV
Sbjct: 311 FNEIIDYISELMMDPFGNYLVQKLLEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAV 370
Query: 244 LKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNC 303
K++E ++IS++++AL+ G V L K+ NG++V+Q C+++ K+L +C
Sbjct: 371 QKIVETAKREEEISIIISALKHGIVHLIKNVNGNHVVQRCLQYLLPYCGKFLFEAAITHC 430
Query: 304 YGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYG--------NYVVQHL 355
+ATD+ GCCVLQ C+ YS+G Q++ LV+EI +NALLL++D +G NYV+Q++
Sbjct: 431 VELATDRHGCCVLQKCLGYSEGEQKQHLVSEIASNALLLSQDPFGIDANFFCRNYVLQYV 490
Query: 356 LALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSM 415
L++ T +L QLEG+Y S K SNVVE+CL + ++ RII EL+ +
Sbjct: 491 FELQLQWATFEILEQLEGNYTELSMQKCSSNVVEKCLKLADDKHRARIIRELINYGRLDQ 550
Query: 416 LLMHPFGNYVIQSALLVSK 434
+++ P+GNYVIQ+AL SK
Sbjct: 551 VMLDPYGNYVIQAALKQSK 569
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 95/259 (36%), Gaps = 50/259 (19%)
Query: 217 TRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
+++ D+ Q R+ L + L NL+ Q +A R L KD +G
Sbjct: 232 AKVIKYGAGDESQNGRLWLQNQLNEDLTMSLNNLSLQPQKYNSIAEARGKIYYLAKDQHG 291
Query: 277 HYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV---- 332
+Q D + + NE+ D + D G ++Q +E QR ++V
Sbjct: 292 CRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLVQKLLEVCNEDQRMQIVHSIT 351
Query: 333 -------------------------------AEIIANALL-----LAEDCYGNYVVQHLL 356
II +AL L ++ GN+VVQ L
Sbjct: 352 RKPGLLIKISCDMHGTRAVQKIVETAKREEEISIIISALKHGIVHLIKNVNGNHVVQRCL 411
Query: 357 ALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSML 416
+P L H V + +++G V+++CL S EQ ++ E+ + N +L
Sbjct: 412 QYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEGEQKQHLVSEI--ASNALLL 469
Query: 417 LMHPFG--------NYVIQ 427
PFG NYV+Q
Sbjct: 470 SQDPFGIDANFFCRNYVLQ 488
>gi|186511600|ref|NP_192624.2| pumilio 11 [Arabidopsis thaliana]
gi|313471422|sp|Q9LDW3.2|PUM11_ARATH RecName: Full=Pumilio homolog 11; Short=APUM-11; Short=AtPUM11
gi|332657281|gb|AEE82681.1| pumilio 11 [Arabidopsis thaliana]
Length = 556
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/319 (45%), Positives = 208/319 (65%), Gaps = 14/319 (4%)
Query: 140 QDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPF 199
+DS D +S+ D G++ +AKDQ GCR LQ+ + ++ +IF EVI+ V EL DPF
Sbjct: 231 EDSLDLASMVDSYGSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPF 290
Query: 200 GNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLV 259
GNY++QKL+E+C+EEQRT+IL+ LT+ LV+I +N +G R V KL+E +T +QISLV
Sbjct: 291 GNYLIQKLIEVCNEEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQISLV 350
Query: 260 LAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHC 319
+AL PG ++L ++ NG++VI C+K FS D K++L C IAT + GCCVLQ C
Sbjct: 351 KSALVPGFLSLFRELNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQRC 410
Query: 320 VEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFS 379
V YS G Q E+LV EI N+LLLA+D +GNY+VQ+++ +V + ++L +L G+YV +
Sbjct: 411 VSYSVGEQHEKLVDEISRNSLLLAQDPFGNYLVQYIIEKKVGGV--NVLFELRGNYVKLA 468
Query: 380 CNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL--------- 430
K+GS+VVE+CL E +S +I+ EL+ N LL P+ NYVIQ AL
Sbjct: 469 TQKFGSHVVEKCLRYYPESRS-QIVNELVSVLNFGYLLQDPYANYVIQCALSKTKGFVRA 527
Query: 431 -LVSKVRLFSSPPIS-VCK 447
LV KVR + + ++ CK
Sbjct: 528 SLVEKVRRYENLKMTPYCK 546
>gi|255555215|ref|XP_002518644.1| Pumilio domain-containing protein C6G9.14, putative [Ricinus
communis]
gi|223542025|gb|EEF43569.1| Pumilio domain-containing protein C6G9.14, putative [Ricinus
communis]
Length = 644
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 195/294 (66%), Gaps = 1/294 (0%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
SSL +RG + +A+DQ GCR LQ+ + L E+ EMIF+EV D + +L++D F NY+VQ
Sbjct: 308 SSLEQVRGRMAMVARDQDGCRFLQKKVEELIPEQTEMIFLEVKDHLYDLIVDQFANYLVQ 367
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTN-PQQISLVLAALR 264
KL C+ Q ++LL L + +L IC++ HG RA+ K++E + N P+Q + +++AL
Sbjct: 368 KLFLACNGVQINQLLLSLVQNGERLKNICIHMHGTRAMQKIIEIINNYPEQKASLVSALG 427
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
V L K+ NGH+VIQ C+K F E T+YLL E+A +C IA DKSGCCVLQ ++ S
Sbjct: 428 NITVYLAKNHNGHHVIQQCLKCFEVEYTQYLLAEIAQSCIEIARDKSGCCVLQKALDSSY 487
Query: 325 GAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
G +E + I ANA +L+ D YGNYVVQ++L + +P A++L QL G +V+ S +K+G
Sbjct: 488 GELKECFITTITANASVLSVDPYGNYVVQYVLQMHIPHAEATILEQLRGQFVNLSMDKFG 547
Query: 385 SNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLF 438
SNVVE+CL E E + I+ EL SP++ +L HPFGNYV QSAL V+ L+
Sbjct: 548 SNVVEKCLKECNEINAAGIVQELADSPSILRVLQHPFGNYVAQSALEVAPEDLY 601
>gi|357489613|ref|XP_003615094.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355516429|gb|AES98052.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 712
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 133/295 (45%), Positives = 193/295 (65%), Gaps = 1/295 (0%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
S L +L+ + +AKDQ G R LQ + E++EM+F VID V ELM+DPFGNY+VQ
Sbjct: 391 SCLPELQSYMFHMAKDQNGGRFLQGMVEKGTVEDMEMVFNGVIDNVVELMMDPFGNYLVQ 450
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E C ++QR +I+LMLT QLVR NTHG R+V KL+ L + +QI+LV +A+ P
Sbjct: 451 KLLEFCRDDQRLQIVLMLTKVPGQLVRTSFNTHGTRSVQKLISTLKSRRQIALVRSAILP 510
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
G + L KD NG++VIQ C+ +S +D +++ + +AT + GCCVLQ C+++SKG
Sbjct: 511 GFLDLVKDLNGNHVIQRCLSCWSVQDNEFIFDAATKFLTDVATHQHGCCVLQRCIDFSKG 570
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
E+LV EI + LA+D YGNYV+Q+++ L++P A L Q +G+YV S K+ S
Sbjct: 571 KSLEKLVKEICKHGFSLAQDPYGNYVIQYIIELQIPSAMAKLTPQFKGNYVILSTQKFSS 630
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
+VVE+CL+ E ++ RI+ ELL P+ LL P+ NYV+Q AL +K L +S
Sbjct: 631 HVVEKCLIYIVETRA-RIVQELLSVPHFERLLQDPYANYVVQKALEYTKGSLHAS 684
>gi|384252508|gb|EIE25984.1| ARM repeat-containing protein [Coccomyxa subellipsoidea C-169]
Length = 380
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 133/294 (45%), Positives = 198/294 (67%), Gaps = 4/294 (1%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
S+ ++ G ++A+AKDQ GCR LQR I+ + EV++ + ELM+DPFGNY++QK
Sbjct: 56 SIEEVLGQVMAVAKDQNGCRFLQRKFDEGGPAAIQAVLPEVLEHLIELMMDPFGNYLIQK 115
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L++ CSE+QR +L + +LV++ LNTHG RAV KL+E LT+ +Q++LV ALR G
Sbjct: 116 LLDRCSEDQRLAVLKK-AAERKELVQVALNTHGTRAVQKLIETLTSREQVALVTDALRGG 174
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
V+L +D NG++VIQ C++ ED++++ + A + IAT + GCCVLQ C++++
Sbjct: 175 VVSLIRDLNGNHVIQRCLQRLGPEDSQFVYDAAAAHTMDIATHRHGCCVLQRCIDFATPP 234
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q+ RLV +I ++AL L++D +GNYVVQ++L L + T S++RQL GHY + K+ SN
Sbjct: 235 QKRRLVDQITSHALPLSQDPFGNYVVQYVLELGHSEATESIMRQLCGHYPELAQQKFSSN 294
Query: 387 VVERCLLESGE---EQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
VVE+CL G+ E R+I ELL SP + LL P+ NYV+QSAL VS +L
Sbjct: 295 VVEKCLKLGGQSLAEMRERVIRELLNSPLMPRLLQDPYANYVLQSALSVSSAQL 348
>gi|125536693|gb|EAY83181.1| hypothetical protein OsI_38391 [Oryza sativa Indica Group]
Length = 503
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/264 (49%), Positives = 170/264 (64%)
Query: 177 KEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLN 236
K E++ IF V ELM++PFGNY++QKL+ +C +EQR I+L LT D F LVRI LN
Sbjct: 211 KREVDFIFAGVARHAVELMVNPFGNYLMQKLLAVCDDEQRMAIVLTLTKDPFVLVRISLN 270
Query: 237 THGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLL 296
HG RAV KL+E+L ++I LV+ ALRPG + L KD NG++V+Q C++ F D K +
Sbjct: 271 VHGTRAVQKLIESLRTREEIQLVVEALRPGFLELIKDPNGNHVVQRCLQSFDANDNKPIF 330
Query: 297 NEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLL 356
A +C I GCCVLQ C+ S G QRE+LVA I +N LA+D YGNYVVQ+++
Sbjct: 331 EAAAVHCLDIGMQCHGCCVLQRCIARSGGEQREKLVAAIASNGFELAQDAYGNYVVQYVI 390
Query: 357 ALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSML 416
L+VP ASL +Q +G Y+ S K+ SNVVE+CL E II+ELL P+ L
Sbjct: 391 DLKVPTANASLTKQFQGRYIHLSMQKFSSNVVEKCLKVFKEADKATIILELLAVPHFEQL 450
Query: 417 LMHPFGNYVIQSALLVSKVRLFSS 440
L HPF NYVI SA+ SK L S+
Sbjct: 451 LQHPFANYVIYSAIQNSKGSLHSA 474
>gi|145354443|ref|XP_001421494.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581731|gb|ABO99787.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]
Length = 326
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 133/292 (45%), Positives = 192/292 (65%), Gaps = 10/292 (3%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G I LA+DQ+GCR LQR + +++ + E+I ELM+DPFGNY+VQKL+E CS
Sbjct: 1 GQISVLARDQHGCRFLQRKFDEEGAKAVDLCYDEIIAEAVELMMDPFGNYLVQKLIECCS 60
Query: 213 EEQRTRIL--LMLTNDDF-----QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
+EQR+ +L + + DD +LV I LNTHG RAV KL+E L +P+++SL ALRP
Sbjct: 61 DEQRSGVLRAVSVVKDDSLDGLPELVTIALNTHGTRAVQKLIEMLNSPEEVSLATNALRP 120
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
G VTL KD NG++VIQ C++ S ED +++ + +C IAT + GCCVLQ C++++
Sbjct: 121 GVVTLIKDLNGNHVIQRCLQRLSSEDNQFIYDAAKVHCVEIATHRHGCCVLQRCIDHAID 180
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
QR LV EI + AL+L++D +GNYVVQ++L L + ++ QL G+Y S K+ S
Sbjct: 181 EQRRPLVLEIASQALVLSQDPFGNYVVQYILDLGLSWANGEVMTQLLGNYAELSMQKFSS 240
Query: 386 NVVERCLL---ESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
NVVE+CL S E+ ++ E+++SP + LLM P+GNYV+QS L V+K
Sbjct: 241 NVVEKCLKLADASLEKNRNTVVREIMQSPLLDRLLMDPYGNYVVQSTLTVTK 292
>gi|308812071|ref|XP_003083343.1| Translational repressor Pumilio/PUF3 and related RNA-binding
proteins (Puf superfamily) (ISS) [Ostreococcus tauri]
gi|116055223|emb|CAL57619.1| Translational repressor Pumilio/PUF3 and related RNA-binding
proteins (Puf superfamily) (ISS) [Ostreococcus tauri]
Length = 340
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/298 (44%), Positives = 195/298 (65%), Gaps = 10/298 (3%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
S+ + G I LA+DQ+GCR LQR + +++ + E+I ELM+DPFGNY+VQK
Sbjct: 7 SVENCVGQISVLARDQHGCRFLQRKFDEEGSKAVDLCYDEIIAEAVELMMDPFGNYLVQK 66
Query: 207 LVELCSEEQRTRILLMLT-----NDDF--QLVRICLNTHGIRAVLKLLENLTNPQQISLV 259
L+E CS+EQR+ +L ++ N D +LV I LNTHG RAV KL+E L +P+++SL
Sbjct: 67 LIECCSDEQRSGVLRAVSVVKADNPDGLPELVTIALNTHGTRAVQKLIEMLNSPEEVSLA 126
Query: 260 LAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHC 319
ALRPG VTL KD NG++VIQ C++ S +D +++ + +C IAT + GCCVLQ C
Sbjct: 127 TTALRPGVVTLIKDLNGNHVIQRCLQRLSCDDNQFIYDAAKVHCVEIATHRHGCCVLQRC 186
Query: 320 VEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFS 379
++++ QR LV EI + AL+L++D +GNYVVQ++L L + ++ QL G+Y S
Sbjct: 187 IDHATEEQRRPLVHEIASQALVLSQDPFGNYVVQYILDLGLSWANGEVMTQLLGNYAELS 246
Query: 380 CNKYGSNVVERCLL---ESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
K+ SNVVE+CL S E+ ++ E+++SP + LLM P+GNYV+QS L V+K
Sbjct: 247 MQKFSSNVVEKCLKLADASLEKNRNTVVREIMQSPLLDRLLMDPYGNYVVQSTLTVTK 304
>gi|303282033|ref|XP_003060308.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457779|gb|EEH55077.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 333
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 190/298 (63%), Gaps = 6/298 (2%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
S+ + G I LA+DQ+GCR LQR ++ + + E+I V +LM+DPFGNY+VQ
Sbjct: 6 GSVDECLGQIGVLARDQHGCRFLQRKFDDEGEDAVNKCYDEIIAEVVDLMMDPFGNYLVQ 65
Query: 206 KLVELCSEEQRTRILLMLTNDDF-QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
KL+E C++EQRT IL D +LV + LNTHG RAV KL+E L P+ I L AL+
Sbjct: 66 KLLECCNDEQRTGILK--AGDGVPELVSVALNTHGTRAVQKLVETLRTPEHIRLATEALK 123
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
PG VTL KD NG++VIQ C++ ED +++ + IAT + GCCVLQ CV+++
Sbjct: 124 PGVVTLIKDLNGNHVIQRCLQRLEAEDNQFVYDAAKACSVEIATHRHGCCVLQRCVDHAA 183
Query: 325 GAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
+QR LV EI A AL+L++D +GNYVVQ++L L +P A ++ +L G Y S K+
Sbjct: 184 DSQRRALVNEIAAQALVLSQDPFGNYVVQYILDLGLPWANAEVMVRLGGAYAELSMQKFS 243
Query: 385 SNVVERCLLESG---EEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFS 439
SNVVE+CL +G EE ++ E++ SP + LLM P+GNYV+QS L V+K L +
Sbjct: 244 SNVVEKCLKLAGQELEEHRNVVVREIMSSPLLDRLLMDPYGNYVVQSTLTVTKGSLHA 301
>gi|115486015|ref|NP_001068151.1| Os11g0579900 [Oryza sativa Japonica Group]
gi|77551702|gb|ABA94499.1| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113645373|dbj|BAF28514.1| Os11g0579900 [Oryza sativa Japonica Group]
gi|125577613|gb|EAZ18835.1| hypothetical protein OsJ_34373 [Oryza sativa Japonica Group]
gi|215717155|dbj|BAG95518.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 746
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 134/321 (41%), Positives = 199/321 (61%), Gaps = 10/321 (3%)
Query: 125 NQWMS-----SLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEE 179
+Q+MS L++K Q + S+ ++ G I LAKDQ GCR LQ+ + KE+
Sbjct: 394 SQFMSLKSEYDLAMKSTQ-----LNYGSVDEVAGRIYMLAKDQNGCRFLQKVFTEGTKED 448
Query: 180 IEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHG 239
E I E+ID ELMIDPFGNY+VQKL+E CS++QRTRI+ +T +L+ + N HG
Sbjct: 449 FEKILAEIIDHFGELMIDPFGNYLVQKLLEECSDDQRTRIICEITRVPGELITVACNMHG 508
Query: 240 IRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV 299
R V K+++ + P+QIS V++AL PGA+ L DTNG +V Q C+K E +LL+
Sbjct: 509 TRTVQKVIDTINTPEQISKVVSALSPGAMRLMTDTNGSHVAQRCLKKLLPEYKAFLLDVA 568
Query: 300 ADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALR 359
A +A D+ GCC++Q C+E+S Q+ L+ +I ++AL L+ED YGNYV+Q ++ L
Sbjct: 569 ALRFLRLAKDQHGCCIIQKCIEHSNDEQKYNLLCKITSSALSLSEDQYGNYVIQFVVNLG 628
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMH 419
+ T+ ++++L+GH+ S K GS+VVE CL ++ E II EL+ + ++
Sbjct: 629 IEWATSKIVKELKGHFGYLSMQKCGSHVVENCLKQASELDREMIIHELMADSKLPHIMAD 688
Query: 420 PFGNYVIQSALLVSKVRLFSS 440
PFGN+VIQ+AL K L SS
Sbjct: 689 PFGNFVIQTALKECKGELHSS 709
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 126/248 (50%), Gaps = 7/248 (2%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSL-PKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELC 211
G ++ +A + +G R +Q+ + ++ E+I + + LM D G++V Q+ ++
Sbjct: 497 GELITVACNMHGTRTVQKVIDTINTPEQISKVVSALSPGAMRLMTDTNGSHVAQRCLKKL 556
Query: 212 SEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLT 271
E + +L + + +R+ + HG + K +E+ + Q+ +L L + A++L+
Sbjct: 557 LPEYKAFLLDVAA---LRFLRLAKDQHGCCIIQKCIEHSNDEQKYNL-LCKITSSALSLS 612
Query: 272 KDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERL 331
+D G+YVIQ+ V T ++ E+ + ++ K G V+++C++ + RE +
Sbjct: 613 EDQYGNYVIQFVVNLGIEWATSKIVKELKGHFGYLSMQKCGSHVVENCLKQASELDREMI 672
Query: 332 VAEIIANALL--LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVE 389
+ E++A++ L + D +GN+V+Q L ++ +S + + H + + Y V+
Sbjct: 673 IHELMADSKLPHIMADPFGNFVIQTALKECKGELHSSFVEAIRPHAPALQNDVYAKRVLS 732
Query: 390 RCLLESGE 397
+ L++ +
Sbjct: 733 KTYLKNKQ 740
>gi|296086803|emb|CBI32952.3| unnamed protein product [Vitis vinifera]
Length = 275
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 167/238 (70%)
Query: 195 MIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQ 254
M++PFGNY++QKL+++C+EEQR +IL+MLT + +LVRI LNTHG R V KL+E L Q
Sbjct: 1 MMNPFGNYLMQKLLDVCNEEQRMQILVMLTEESGELVRISLNTHGTRVVQKLIETLKTRQ 60
Query: 255 QISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCC 314
QIS V++AL PG + L KD NG++VIQ C++ S ED K++ A C IAT + GCC
Sbjct: 61 QISRVISALEPGFLALIKDLNGNHVIQRCLQCLSKEDNKFIFVAAAKYCVEIATHQHGCC 120
Query: 315 VLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGH 374
VLQ C+ +S G RE LVAEI +N LLA+D +GNYVVQ +L L++P T++L+ Q EG+
Sbjct: 121 VLQRCISHSTGEYRENLVAEISSNGFLLAQDAFGNYVVQFILELKIPSATSNLIAQFEGN 180
Query: 375 YVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLV 432
YV S ++ S+VVE+CL EE +RI+ ELL + + LL HP NYVIQ AL V
Sbjct: 181 YVHLSTQRFSSHVVEKCLTVCTEENQSRIVHELLSTSHFEQLLQHPHANYVIQKALQV 238
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 93/245 (37%), Gaps = 42/245 (17%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L +AL KD G +QR + L KE+ + IFV E+ G V+Q+ +
Sbjct: 69 LEPGFLALIKDLNGNHVIQRCLQCLSKEDNKFIFVAAAKYCVEIATHQHGCCVLQRCISH 128
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ E R ++ ++++ F L
Sbjct: 129 STGEYRENLVAEISSNGF----------------------------------------LL 148
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YV+Q+ ++ T L+ + N ++T + V++ C+ + R
Sbjct: 149 AQDAFGNYVVQFILELKIPSATSNLIAQFEGNYVHLSTQRFSSHVVEKCLTVCTEENQSR 208
Query: 331 LVAEIIANALL--LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
+V E+++ + L + + NYV+Q L + + + + +E H + Y +
Sbjct: 209 IVHELLSTSHFEQLLQHPHANYVIQKALQVYEGPLHNAFIEAIESHKAIMRNSPYSKKIF 268
Query: 389 ERCLL 393
LL
Sbjct: 269 SHKLL 273
>gi|15220217|ref|NP_174811.1| protein pumilio 9 [Arabidopsis thaliana]
gi|122244101|sp|Q1PFN9.1|PUM9_ARATH RecName: Full=Pumilio homolog 9; Short=APUM-9; Short=AtPUM9
gi|91805917|gb|ABE65687.1| pumilio/Puf RNA-binding domain-containing protein [Arabidopsis
thaliana]
gi|332193705|gb|AEE31826.1| protein pumilio 9 [Arabidopsis thaliana]
Length = 564
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 208/339 (61%), Gaps = 9/339 (2%)
Query: 96 QDSSILNLLHNHNFDGLRSNGNELSSVPRNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNI 155
+DSS+L+ H L ++ E + + +S K N D S+ ++ G++
Sbjct: 201 EDSSLLSPFHEKVSGKLGASYLEDTVLIGQGSYGKMSPKSNN------DLVSMVEIYGSV 254
Query: 156 VALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQ 215
+AKDQ GCR LQ+ + E ++I + +ID V EL +DPFGNY+VQKL ++ EEQ
Sbjct: 255 NLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELSMDPFGNYIVQKLFDVSDEEQ 314
Query: 216 RTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTN 275
RT I+ +LT++ +L+RICLNT+G R V K++E + QQI+LV + L+PG + L KD N
Sbjct: 315 RTLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQIALVKSGLKPGFLALVKDLN 374
Query: 276 GHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEI 335
G++VIQ C++ D +++L C IA + GCCVLQ C+ S G QRERLVAEI
Sbjct: 375 GNHVIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQCCISNSVGLQRERLVAEI 434
Query: 336 IANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLES 395
N+L L++D +GNYVVQ+L+ +V + LL Q HY + K+ S+V+E+CL +
Sbjct: 435 SRNSLHLSQDPFGNYVVQYLIDQQVSAV--KLLVQFRMHYAELATQKFSSHVIEKCLRKY 492
Query: 396 GEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
E ++ I+ ELL PN LL P+ NYVIQ+AL V+K
Sbjct: 493 PESRA-EIVRELLCVPNFEYLLQDPYANYVIQTALSVTK 530
>gi|356550783|ref|XP_003543763.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
max]
Length = 623
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/298 (43%), Positives = 196/298 (65%), Gaps = 1/298 (0%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
++ S L +G I LAKDQ GCR LQR + E++ ++F VID V ELMIDPFGNY
Sbjct: 299 YNFSPLAKFQGYIYYLAKDQNGCRFLQRMIDEGTSEDVLVLFNGVIDDVVELMIDPFGNY 358
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+VQKL+++C E++R +++ MLT + QLV+ LN HG R V KL+ + + +QI+++ +A
Sbjct: 359 LVQKLLDVCGEDERLQVVSMLTEEPGQLVKTSLNLHGTRVVQKLITTVDSRKQIAMLRSA 418
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
++ G + L KD NG++VIQ C+++FS +D +++ C IAT + GCCVLQ C++Y
Sbjct: 419 IQSGFLALIKDLNGNHVIQRCLQYFSCKDNEFIFYAATKFCVEIATHQHGCCVLQRCIDY 478
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
S G ++ LV EI + LLA+D +GNYVVQ+++ + P + L Q +G+Y + S K
Sbjct: 479 STGKYKDMLVKEICRHGHLLAQDPFGNYVVQYIIEMENPSASLKLHSQFKGNYANLSMQK 538
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
+ S+VVE+CL+ E +S RI+ EL P++ LL P+ NYV+Q AL V+K L +S
Sbjct: 539 FSSHVVEKCLVHIVEIRS-RIVQELSSFPHLERLLQDPYANYVVQRALGVTKGSLHAS 595
>gi|8778968|gb|AAF79883.1|AC021198_3 Contains similarity to a putative protein CAB78009 gi|7267527 from
Arabidopsis thaliana BAC T32A17 gb|AL161513. It contains
Pumilio-family RNA binding domains PF|00806 [Arabidopsis
thaliana]
Length = 671
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 208/339 (61%), Gaps = 9/339 (2%)
Query: 96 QDSSILNLLHNHNFDGLRSNGNELSSVPRNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNI 155
+DSS+L+ H L ++ E + + +S K N D S+ ++ G++
Sbjct: 308 EDSSLLSPFHEKVSGKLGASYLEDTVLIGQGSYGKMSPKSNN------DLVSMVEIYGSV 361
Query: 156 VALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQ 215
+AKDQ GCR LQ+ + E ++I + +ID V EL +DPFGNY+VQKL ++ EEQ
Sbjct: 362 NLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELSMDPFGNYIVQKLFDVSDEEQ 421
Query: 216 RTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTN 275
RT I+ +LT++ +L+RICLNT+G R V K++E + QQI+LV + L+PG + L KD N
Sbjct: 422 RTLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQIALVKSGLKPGFLALVKDLN 481
Query: 276 GHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEI 335
G++VIQ C++ D +++L C IA + GCCVLQ C+ S G QRERLVAEI
Sbjct: 482 GNHVIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQCCISNSVGLQRERLVAEI 541
Query: 336 IANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLES 395
N+L L++D +GNYVVQ+L+ +V + LL Q HY + K+ S+V+E+CL +
Sbjct: 542 SRNSLHLSQDPFGNYVVQYLIDQQVSAV--KLLVQFRMHYAELATQKFSSHVIEKCLRKY 599
Query: 396 GEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
E ++ I+ ELL PN LL P+ NYVIQ+AL V+K
Sbjct: 600 PESRA-EIVRELLCVPNFEYLLQDPYANYVIQTALSVTK 637
>gi|357120480|ref|XP_003561955.1| PREDICTED: uncharacterized protein LOC100842718 [Brachypodium
distachyon]
Length = 685
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 188/290 (64%), Gaps = 1/290 (0%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G I +AKDQ GCR LQ+ K+ ++ IF +I+ + ELM + F NY+VQKL+++
Sbjct: 369 VKGYIYFMAKDQNGCRFLQQKFEE-GKQHVDAIFEGIINHIAELMTNSFANYLVQKLLDV 427
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
C EEQR RI+ +LT D +L+RI LNTHG RAV KL+E + +QI L+++A++PG + L
Sbjct: 428 CDEEQRLRIIAVLTEDPVKLLRISLNTHGTRAVQKLIETVKIRKQIVLIISAIQPGFMHL 487
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
D NG++VIQ C+ +F E+ K++ A +C+ +A + GCCVLQ C+ ++G + +
Sbjct: 488 VNDLNGNHVIQKCLTNFGVEENKFIFEAAAAHCFEMAIHRHGCCVLQKCITSARGEYQAK 547
Query: 331 LVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
L+ E+ A+A LA+D +GNYVVQ++L ++P A L Q EG+YV S K SNVVE+
Sbjct: 548 LIVEVCAHAFQLAQDPFGNYVVQYVLDQKIPSANAHLAAQFEGNYVYLSKQKVSSNVVEK 607
Query: 391 CLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
CL +E I+ +L+ + LL PF NYVI +AL+ S+ L ++
Sbjct: 608 CLKVFSDEDKAAIVFDLISVTHFEQLLQDPFANYVIHTALVNSRGHLHNA 657
>gi|290985728|ref|XP_002675577.1| predicted protein [Naegleria gruberi]
gi|284089174|gb|EFC42833.1| predicted protein [Naegleria gruberi]
Length = 737
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 126/294 (42%), Positives = 185/294 (62%), Gaps = 4/294 (1%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
SS+ D G + LAKDQYGCR LQ+ ++ ++ ++M+F E+ D + ELM DPFGNY+ Q
Sbjct: 403 SSMTDAVGKVYKLAKDQYGCRFLQKKITD-GEQGLQMVFDEIYDHIVELMTDPFGNYLCQ 461
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KLVE C+ E +T I+ ++ D L+ I +N HG RAV KL+E LT QI ++ AL+
Sbjct: 462 KLVEHCTNEHKTLIIRAVSKD---LINISMNMHGTRAVQKLIECLTTQDQIGEIIEALKD 518
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
V L KD NG++VIQ C++ E+ +++ N VA C +AT K GCCVLQ C++++
Sbjct: 519 SVVPLIKDLNGNHVIQRCLQQLIPENKQFIYNAVAGRCVEVATHKHGCCVLQRCIDHAAE 578
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
+QR L+ E+IANA L ++ +GNYVVQ++L L I ++ + G S S NK+ S
Sbjct: 579 SQRMMLIKEVIANAHTLIQNPFGNYVVQYVLDLGDDSINEKIIARFYGSIASLSINKFSS 638
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFS 439
NV+E+CL E +I E+L N+S LL FGNYV+Q+A+ +S F+
Sbjct: 639 NVIEKCLRIGNENVKNTMIEEVLEDRNLSALLQDSFGNYVVQTAISISDANQFA 692
>gi|356551678|ref|XP_003544201.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
max]
Length = 622
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 126/298 (42%), Positives = 194/298 (65%), Gaps = 1/298 (0%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
++ S L G I LAK Q GCR LQR + E + ++F VID V ELM+DPFGNY
Sbjct: 298 YNFSPLSKFHGYIYYLAKHQNGCRFLQRMIDEGTSEHVLIVFNGVIDDVVELMVDPFGNY 357
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+VQKL+++ +++R +++ MLT + QL++ LN HG R V KL+ + + +QI+++++A
Sbjct: 358 LVQKLLDVGGDDERLQVVSMLTKEPGQLIKTSLNIHGTRVVQKLITTVDSRKQIAMLMSA 417
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
++ G + L KD NG++VIQ C+++FS +D +++ C IAT + GCCVLQ C++Y
Sbjct: 418 IQSGFLALIKDLNGNHVIQRCLQYFSCKDNEFIFYAATKFCVEIATHQHGCCVLQRCIDY 477
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
S G +++LV EI + LLLA+D +GNYVVQ+++ + P + L Q +G+Y + S K
Sbjct: 478 STGKYQDKLVKEICRHGLLLAQDPFGNYVVQYIIEMENPTASFKLHSQFKGNYTNLSMQK 537
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
Y S+VVE+CL+ E +S RI+ E L P+ LL +GNYV+Q AL V+K L +S
Sbjct: 538 YSSHVVEKCLVHLAEIKS-RIVQEFLSFPHFEQLLQDLYGNYVVQRALGVTKGFLHAS 594
>gi|341038523|gb|EGS23515.1| pumilio domain-containing protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1033
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 123/284 (43%), Positives = 184/284 (64%), Gaps = 3/284 (1%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
SL GNI +L KDQ+GCR+LQ+ + + +I MI++EV + ELM+DPFGNY+ QK
Sbjct: 590 SLEQCAGNIYSLCKDQHGCRYLQKQLENRIPAQIHMIWLEVNQHIVELMMDPFGNYLCQK 649
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
LVE CS+E+RT +++ N ++VRI LN HG RA+ K++E++T P Q++L++ ALR
Sbjct: 650 LVEFCSDEERT---VLIQNAAPEMVRIALNQHGTRALQKMIEHVTTPAQVNLIVEALRHQ 706
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
V L +D NG++VIQ C+ S D ++ + V NC + T + GCCVLQ C++++ GA
Sbjct: 707 VVELIQDLNGNHVIQKCLNKLSATDASFIFDAVGKNCVEVGTHRHGCCVLQRCIDHADGA 766
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q+ L+ I A+A+ L +D +GNYVVQ+++ L T L+ Q +G +S S +K+ SN
Sbjct: 767 QKVWLIECITAHAVTLVQDPFGNYVVQYIIDLNEETFTEPLVNQFKGRIISLSKHKFSSN 826
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
VVE+CL + + I+ ELL + LL F NYVIQ+AL
Sbjct: 827 VVEKCLRCASDAARDMIVNELLTPGEMERLLRDSFANYVIQTAL 870
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 6/227 (2%)
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
V+Q ++ SE L L + +C + HG R + K LEN P QI ++
Sbjct: 571 VIQSRRQMDSEAMARYNNLSLEQCAGNIYSLCKDQHGCRYLQKQLENRI-PAQIHMIWLE 629
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
+ V L D G+Y+ Q V+ S E+ L+ A IA ++ G LQ +E+
Sbjct: 630 VNQHIVELMMDPFGNYLCQKLVEFCSDEERTVLIQNAAPEMVRIALNQHGTRALQKMIEH 689
Query: 323 SKGAQRERLVAEIIANALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHY-VSFSC 380
+ L+ E + + ++ L +D GN+V+Q L ++ AS + G V
Sbjct: 690 VTTPAQVNLIVEALRHQVVELIQDLNGNHVIQKCLN-KLSATDASFIFDAVGKNCVEVGT 748
Query: 381 NKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQ 427
+++G V++RC+ + Q +IE + + V+ L+ PFGNYV+Q
Sbjct: 749 HRHGCCVLQRCIDHADGAQKV-WLIECITAHAVT-LVQDPFGNYVVQ 793
>gi|320162710|gb|EFW39609.1| RNA-binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 1111
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 128/296 (43%), Positives = 185/296 (62%), Gaps = 3/296 (1%)
Query: 141 DSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFG 200
+ F +++ G I +L KDQ GCR LQR + + I++IF EV + V ELM DPFG
Sbjct: 765 EGFRYTTIEQAAGKIYSLCKDQIGCRFLQRKIEEQNESVIQIIFDEVFEHVGELMTDPFG 824
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVL 260
NY+ QKL+E C+E QRT I+ + + LV I LN HG RAV KL E L QI LV+
Sbjct: 825 NYLCQKLLEHCTEAQRTAIVQRVAPE---LVSISLNMHGTRAVQKLTECLKERGQIELVI 881
Query: 261 AALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCV 320
+A R VTL KD NG++VIQ C++ FS D +++ + VA NC +AT + GCCV+Q C+
Sbjct: 882 SAFRDAVVTLIKDLNGNHVIQRCLQRFSAADNQFIYDAVASNCVQVATHRHGCCVMQRCI 941
Query: 321 EYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSC 380
+ + AQ+ +LV E+ + L L +D +GNYVVQ++L L +P+ + +L+ Q G+ +
Sbjct: 942 DNATEAQKHQLVNEVTFHVLNLVQDPFGNYVVQYVLDLNIPRFSDALVNQFLGNICPLAI 1001
Query: 381 NKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVR 436
K+ SNV+E+CL S T +++ELL + LL PFGNYVIQ+AL + +
Sbjct: 1002 QKFSSNVIEKCLRASEPATRTTMMLELLDERWLPRLLQDPFGNYVIQTALGIGDAQ 1057
>gi|297852018|ref|XP_002893890.1| hypothetical protein ARALYDRAFT_473696 [Arabidopsis lyrata subsp.
lyrata]
gi|297339732|gb|EFH70149.1| hypothetical protein ARALYDRAFT_473696 [Arabidopsis lyrata subsp.
lyrata]
Length = 565
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/288 (45%), Positives = 189/288 (65%), Gaps = 3/288 (1%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
S+ ++ G++ +AKDQ GCR LQ+ + + ++IF E+ID V EL +DPFGNY+VQK
Sbjct: 247 SMVEIYGSVNLMAKDQIGCRVLQKLVEEGTVLDAKVIFHEIIDHVVELSMDPFGNYIVQK 306
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L+E+ EEQRT I+ +LT+ +L++ICLNT+G R V K++E + QQI+LV L+PG
Sbjct: 307 LLEVSDEEQRTLIVSVLTSKPRELIQICLNTYGTRVVQKMIETVKTKQQIALVKFGLKPG 366
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ L KD NG++VIQ C++ D K++L C IA + GCCVLQ C+ S G
Sbjct: 367 FLALVKDLNGNHVIQSCLQTLGPNDNKFVLEAATKYCAEIAIHRHGCCVLQCCLSNSVGL 426
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
QRERLVAEI NAL L++D +GNYVVQ+L+ +V + LL + HY + K+ S+
Sbjct: 427 QRERLVAEISRNALHLSQDPFGNYVVQYLIEQQVSAV--KLLVRFRMHYAELATQKFSSH 484
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
V+E+CL + E ++ I+ EL+ PN LL P+ NYVIQ+AL V+K
Sbjct: 485 VIEKCLRKYPESRA-EIVRELICVPNFEYLLQDPYANYVIQTALSVTK 531
>gi|115451267|ref|NP_001049234.1| Os03g0191700 [Oryza sativa Japonica Group]
gi|108706609|gb|ABF94404.1| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113547705|dbj|BAF11148.1| Os03g0191700 [Oryza sativa Japonica Group]
Length = 708
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 190/289 (65%), Gaps = 1/289 (0%)
Query: 152 RGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELC 211
+G I +AKDQ GCR LQ+ K++ ++IF +ID + ELM + F NY+VQKL+++C
Sbjct: 393 KGYIYFMAKDQNGCRFLQQKFEE-GKDQADLIFEGIIDHIPELMANSFANYLVQKLLDVC 451
Query: 212 SEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLT 271
EEQR RI+ +LT D +L+R+ LN+HG R++ KL+E + +QI L+++AL+PG + L
Sbjct: 452 DEEQRLRIIAVLTEDPVKLLRVSLNSHGTRSIQKLIETVKTRKQIMLIISALQPGFIHLV 511
Query: 272 KDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERL 331
D NG++VIQ C+K+F E+ K++ A +C +A ++ GCCVLQ C+ + G + +L
Sbjct: 512 NDPNGNHVIQKCLKNFDAEENKFIFEAAATHCVEMAINRHGCCVLQSCISNAYGEYQIKL 571
Query: 332 VAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERC 391
+ +I A+ L LA+D +GNYV+Q++L L++P A L +G+YV S K GSNVVE+C
Sbjct: 572 IMQICADGLYLAQDQFGNYVIQYVLDLKIPFANAQLASLFQGNYVYLSKQKVGSNVVEKC 631
Query: 392 LLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
L ++ II EL+ + + LL P+ NYVI +AL+ ++ L S+
Sbjct: 632 LKVFPDDDKAAIIWELISASHFEQLLQDPYANYVIHTALVQTRGHLRSA 680
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 99/224 (44%), Gaps = 7/224 (3%)
Query: 161 DQYGCRHLQRTMSSLP-KEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRI 219
+ +G R +Q+ + ++ +++I +I + L+ DP GN+V+QK ++ E+ I
Sbjct: 476 NSHGTRSIQKLIETVKTRKQIMLIISALQPGFIHLVNDPNGNHVIQKCLKNFDAEENKFI 535
Query: 220 LLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYV 279
V + +N HG + + N QI L++ G + L +D G+YV
Sbjct: 536 FEAAAT---HCVEMAINRHGCCVLQSCISNAYGEYQIKLIMQICADG-LYLAQDQFGNYV 591
Query: 280 IQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANA 339
IQY + L + N ++ K G V++ C++ + ++ E+I+ +
Sbjct: 592 IQYVLDLKIPFANAQLASLFQGNYVYLSKQKVGSNVVEKCLKVFPDDDKAAIIWELISAS 651
Query: 340 LL--LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L +D Y NYV+ L + ++L+ + H + N
Sbjct: 652 HFEQLLQDPYANYVIHTALVQTRGHLRSALVNAILPHEEAIRTN 695
>gi|224056214|ref|XP_002298759.1| predicted protein [Populus trichocarpa]
gi|222846017|gb|EEE83564.1| predicted protein [Populus trichocarpa]
Length = 614
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/291 (44%), Positives = 192/291 (65%)
Query: 144 DCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYV 203
D SL L+G + A+ Q R LQ + + IEMIF+EV D V +LM D FGN+V
Sbjct: 286 DHPSLYKLKGRVAVAARSQILYRVLQGVLDERKPDLIEMIFLEVKDYVHDLMEDQFGNHV 345
Query: 204 VQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL 263
+QKL E+CSE Q T+++L L ++ +L+ +C + G RA+ K++E++ P+Q L+ L
Sbjct: 346 IQKLFEVCSEAQMTQLILSLIHNQRRLLGLCFHLVGTRAMQKMIEHIKTPKQRLLLTQVL 405
Query: 264 RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
V L+++ NG++VIQ C++HF +D K L+ E+A++ IA DKSGCCVL ++ +
Sbjct: 406 IRRTVILSQNQNGYHVIQKCLEHFPFDDIKPLIKEIAESFLDIAMDKSGCCVLNRALDCA 465
Query: 324 KGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+G + L+ E IANA+LL+E YGNYVVQH+L R+ T +L +L+G++VS S NK+
Sbjct: 466 QGELKHLLLLETIANAMLLSESPYGNYVVQHVLDERIQHATIGILEKLKGYFVSLSMNKF 525
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
GSNVVE+CL+ SGEE ++ II E + SP + + FGNYV+Q AL VSK
Sbjct: 526 GSNVVEKCLIWSGEENASMIIEEFMHSPYFVNICRNNFGNYVVQKALEVSK 576
>gi|319411787|emb|CBQ73830.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 1016
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/286 (43%), Positives = 183/286 (63%), Gaps = 3/286 (1%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
+ L DL+G+I AL KDQ+GCR LQ+ + +MIF E ELM DPFGNY+
Sbjct: 525 TTQLEDLQGDIFALCKDQHGCRFLQKKLEESNPAHRDMIFSETFTHFAELMTDPFGNYLC 584
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK++E C++EQR I+ ++ ++ LV I LN HG RAV K+++ L+ P+QI ++ AL
Sbjct: 585 QKMLEYCTDEQRNLIVELVASE---LVTISLNMHGTRAVQKMIDFLSTPRQIHSIIVALS 641
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
VTL KD NG++V+Q C+ ED +++ N VA +C +AT + GCCVLQ C++++
Sbjct: 642 MNVVTLIKDLNGNHVVQKCLNRLGAEDNQFIYNAVAAHCVEVATHRHGCCVLQRCIDHAS 701
Query: 325 GAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
AQR +LVAEI NAL L +D +GNYVVQ++L L +P+ T +++RQ G+ S K+
Sbjct: 702 EAQRVQLVAEITYNALTLVQDPFGNYVVQYVLDLSIPRFTDAVVRQFVGNVCLLSVQKFS 761
Query: 385 SNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
SNV+E+C+ S ++I ELL + LL F NYV+Q++L
Sbjct: 762 SNVMEKCIRVSEPGVRKQLIEELLNRTRLEKLLRDSFANYVVQTSL 807
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 7/222 (3%)
Query: 217 TRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
T L L D F L C + HG R + K LE +NP ++ + L D G
Sbjct: 525 TTQLEDLQGDIFAL---CKDQHGCRFLQKKLEE-SNPAHRDMIFSETFTHFAELMTDPFG 580
Query: 277 HYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGAQRERLVAEI 335
+Y+ Q +++ + E ++ VA I+ + G +Q +++ S Q ++ +
Sbjct: 581 NYLCQKMLEYCTDEQRNLIVELVASELVTISLNMHGTRAVQKMIDFLSTPRQIHSIIVAL 640
Query: 336 IANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLES 395
N + L +D GN+VVQ L + + + H V + +++G V++RC+ +
Sbjct: 641 SMNVVTLIKDLNGNHVVQKCLNRLGAEDNQFIYNAVAAHCVEVATHRHGCCVLQRCIDHA 700
Query: 396 GEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
E Q +++ E+ N L+ PFGNYV+Q L +S R
Sbjct: 701 SEAQRVQLVAEITY--NALTLVQDPFGNYVVQYVLDLSIPRF 740
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
D L ++ + + + D+ GC LQ +E S A R+ + +E + L D +GNY
Sbjct: 523 DATTQLEDLQGDIFALCKDQHGCRFLQKKLEESNPAHRDMIFSETFTHFAELMTDPFGNY 582
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCL-LESGEEQSTRIIIELLR 409
+ Q +L + ++ + V+ S N +G+ V++ + S Q II+ L
Sbjct: 583 LCQKMLEYCTDEQRNLIVELVASELVTISLNMHGTRAVQKMIDFLSTPRQIHSIIVAL-- 640
Query: 410 SPNVSMLLMHPFGNYVIQSAL 430
S NV L+ GN+V+Q L
Sbjct: 641 SMNVVTLIKDLNGNHVVQKCL 661
>gi|357151863|ref|XP_003575930.1| PREDICTED: pumilio homolog 12-like [Brachypodium distachyon]
Length = 767
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 120/285 (42%), Positives = 187/285 (65%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+S+ ++ G I LAKDQ GCR LQ+ + +E++E +F E+ID + +LM+DPFGNY+VQ
Sbjct: 436 NSVDEVAGRIYMLAKDQNGCRFLQKVFAQGSQEDVEKVFGEIIDHIGDLMVDPFGNYLVQ 495
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E CSE+QR RIL +T QL+ + N HG RAV K++E + +P Q+S V++AL P
Sbjct: 496 KLLEGCSEDQRMRILCEVTKMPGQLIAVSCNMHGTRAVQKIIETINSPDQVSKVVSALSP 555
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
GA+ L D NG +V C++ E +LL+ + +AT + GCC++Q C+E+S
Sbjct: 556 GAMHLMLDPNGSHVANRCLQKLLPESKVFLLDAATLHYLELATHQQGCCIIQKCIEHSND 615
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
Q+ L++ II++AL L++D +GNYV+Q +L + T ++ +LEGH+ S K GS
Sbjct: 616 EQKYSLLSNIISSALTLSDDQFGNYVIQSILNHNIGWATCKIVDELEGHFGYLSMQKCGS 675
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+VVE CL ++ + + RII EL+ P + +++ FGN+VIQ+AL
Sbjct: 676 HVVENCLRQAPQHKRDRIIGELMNDPKLPHIMVDQFGNFVIQTAL 720
>gi|85083831|ref|XP_957198.1| hypothetical protein NCU01775 [Neurospora crassa OR74A]
gi|18376126|emb|CAD21191.1| conserved hypothetical protein [Neurospora crassa]
gi|28918285|gb|EAA27962.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 677
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 184/288 (63%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F+ L + G I L KDQ+GCR+LQ+ + +E+I MI++E V ELM DPFGNY
Sbjct: 259 FNNLPLEQVVGTIYTLCKDQHGCRYLQKKLDDRNEEQIHMIWLETNQHVIELMTDPFGNY 318
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+ELCSE++RT ++ T+D +VRI LN HG RA+ K+++++++P QI+L++ A
Sbjct: 319 LCQKLLELCSEDERTVLIRNATSD---MVRIALNAHGTRALQKMIDSVSSPAQINLIIEA 375
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ + D ++ + V NC + T + GCCVLQ C+++
Sbjct: 376 LRNRVVELIQDLNGNHVIQKCLNKLNATDASFIFDAVGQNCVEVGTHRHGCCVLQRCIDH 435
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ GA++ L+ I ANA+ L +D +GNYVVQ+++ L P T L+ Q G S +K
Sbjct: 436 ADGAKKIWLIERITANAVTLVQDPFGNYVVQYIIDLNEPSFTEPLVGQFLGRIPQLSKHK 495
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNVVE+CL + RI+ E++ + L+ +GNYV+Q+AL
Sbjct: 496 FSSNVVEKCLRCASPNSKDRIVSEIMSQNEIKQLMQDSYGNYVVQTAL 543
>gi|119497273|ref|XP_001265396.1| RNA-binding protein, putative [Neosartorya fischeri NRRL 181]
gi|119413558|gb|EAW23499.1| RNA-binding protein, putative [Neosartorya fischeri NRRL 181]
Length = 1056
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 120/283 (42%), Positives = 176/283 (62%), Gaps = 3/283 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L RG + L KDQ+GCR+LQR + E ++ IF E V ELM DPFGNY+ QKL
Sbjct: 637 LEHYRGELYTLCKDQHGCRYLQRKLEERNPEHVQFIFDETNMHVVELMTDPFGNYLCQKL 696
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E ++EQRT ++ N QLV+I LN HG RA+ K++E ++ P+QI V+ ALR
Sbjct: 697 LEYSNDEQRT---ALINNAAHQLVKIALNQHGTRALQKMIEFISTPEQIQTVIQALRDHV 753
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L +D NG++VIQ C+ S ED +++ + V NC + T + GCCVLQ C++++ G Q
Sbjct: 754 VELVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGGNCVVVGTHRHGCCVLQRCIDHASGEQ 813
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R RL+A+I ANA L +D +GNYVVQ++L L P T L + G+ + S K+ SNV
Sbjct: 814 RARLIAQITANAFALVQDPFGNYVVQYILDLAEPHFTEPLCQAFRGNIPALSKQKFSSNV 873
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+E+CL + + ++I E+L + +L F NYV+Q+A+
Sbjct: 874 IEKCLRTAEFQMRRQMIDEMLAGAELEKMLRDSFANYVVQTAM 916
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 1/139 (0%)
Query: 292 TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYV 351
T + L Y + D+ GC LQ +E + + E + + L D +GNY+
Sbjct: 633 TNFPLEHYRGELYTLCKDQHGCRYLQRKLEERNPEHVQFIFDETNMHVVELMTDPFGNYL 692
Query: 352 VQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSP 411
Q LL + +L+ V + N++G+ +++ + + + +I+ LR
Sbjct: 693 CQKLLEYSNDEQRTALINNAAHQLVKIALNQHGTRALQKMIEFISTPEQIQTVIQALRD- 751
Query: 412 NVSMLLMHPFGNYVIQSAL 430
+V L+ GN+VIQ L
Sbjct: 752 HVVELVQDLNGNHVIQKCL 770
>gi|412986524|emb|CCO14950.1| predicted protein [Bathycoccus prasinos]
Length = 699
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/299 (42%), Positives = 188/299 (62%), Gaps = 10/299 (3%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
S+ + G I LA+DQYGCR LQR I+ F E+I+ +LM+DPFGNY++Q
Sbjct: 363 GSIEECVGQISILARDQYGCRFLQRKFDEDGSAAIDACFDEIIEEAVDLMMDPFGNYLLQ 422
Query: 206 KLVELCSEEQRTRIL--LMLTNDDF-----QLVRICLNTHGIRAVLKLLENLTNPQQISL 258
KL+E CS++QR ++ + + N++ +LV I LN HG RAV KL+E L++ ++I L
Sbjct: 423 KLLECCSDKQRADVVRAVSVVNENANTGLPELVSIALNAHGTRAVQKLIETLSSDEEIEL 482
Query: 259 VLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQH 318
ALRPG VTL KD NG++V+Q C++ S ED +++ + IAT + GCCVLQ
Sbjct: 483 TTKALRPGVVTLIKDLNGNHVVQRCLQRLSAEDNQFIYEAAKKHSVEIATHRHGCCVLQR 542
Query: 319 CVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSF 378
C++++ Q+ LV EI AL L+ D +GNYVVQ++L L + A ++ +L G+Y
Sbjct: 543 CIDHATEEQKRPLVQEIADQALTLSRDPFGNYVVQYILDLGLSWANAEVMMRLVGNYAEL 602
Query: 379 SCNKYGSNVVERCLL---ESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
S K+ SNVVE+CL + EE ++ E++ SP + LLM P+GNYV+QS L+V+K
Sbjct: 603 SMQKFSSNVVEKCLKLADQQLEEHRNVVVREIMSSPLLDRLLMDPYGNYVVQSTLMVTK 661
>gi|336468401|gb|EGO56564.1| hypothetical protein NEUTE1DRAFT_65206 [Neurospora tetrasperma FGSC
2508]
gi|350289343|gb|EGZ70568.1| ARM repeat-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 676
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 184/288 (63%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F+ L + G I L KDQ+GCR+LQ+ + +E+I MI++E V ELM DPFGNY
Sbjct: 258 FNNLPLEQVVGTIYTLCKDQHGCRYLQKKLDDRNEEQIHMIWLETNQHVIELMTDPFGNY 317
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+ELCSE++RT ++ T+D +VRI LN HG RA+ K+++++++P QI+L++ A
Sbjct: 318 LCQKLLELCSEDERTVLIRNATSD---MVRIALNAHGTRALQKMIDSVSSPAQINLIIEA 374
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ + D ++ + V NC + T + GCCVLQ C+++
Sbjct: 375 LRNRVVELIQDLNGNHVIQKCLNKLNATDASFIFDAVGQNCVEVGTHRHGCCVLQRCIDH 434
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ GA++ L+ I ANA+ L +D +GNYVVQ+++ L P T L+ Q G S +K
Sbjct: 435 ADGAKKIWLIERITANAVTLVQDPFGNYVVQYIIDLNEPSFTEPLVGQFLGRIPQLSKHK 494
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNVVE+CL + RI+ E++ + L+ +GNYV+Q+AL
Sbjct: 495 FSSNVVEKCLRCASPNSKDRIVSEIMSQNEIKQLMQDSYGNYVVQTAL 542
>gi|70990304|ref|XP_750001.1| RNA-binding protein [Aspergillus fumigatus Af293]
gi|66847633|gb|EAL87963.1| RNA-binding protein, putative [Aspergillus fumigatus Af293]
Length = 1062
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/283 (42%), Positives = 177/283 (62%), Gaps = 3/283 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L RG + L KDQ+GCR+LQR + E +++IF E V ELM DPFGNY+ QKL
Sbjct: 643 LEHYRGELYTLCKDQHGCRYLQRKLEERNPEHVQLIFDETNMHVVELMTDPFGNYLCQKL 702
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E ++EQRT ++ N QLV+I LN HG RA+ K++E ++ P+QI V+ ALR
Sbjct: 703 LEFSNDEQRTALINNAAN---QLVKIALNQHGTRALQKMIEFISTPEQIQTVIQALRDHV 759
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L +D NG++VIQ C+ S ED +++ + V NC + T + GCCVLQ C++++ G Q
Sbjct: 760 VELVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQ 819
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R RL+A+I ANA L +D +GNYVVQ++L L P T L + G+ + S K+ SNV
Sbjct: 820 RARLIAQITANAFALVQDPFGNYVVQYILDLAEPHFTEPLCQAFRGNIPALSKQKFSSNV 879
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+E+CL + + ++I E+L + +L F NYV+Q+A+
Sbjct: 880 IEKCLRTAEFQMRRQMIDEMLAGTELEKMLRDSFANYVVQTAM 922
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 1/139 (0%)
Query: 292 TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYV 351
T + L Y + D+ GC LQ +E + + E + + L D +GNY+
Sbjct: 639 TNFPLEHYRGELYTLCKDQHGCRYLQRKLEERNPEHVQLIFDETNMHVVELMTDPFGNYL 698
Query: 352 VQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSP 411
Q LL + +L+ V + N++G+ +++ + + + +I+ LR
Sbjct: 699 CQKLLEFSNDEQRTALINNAANQLVKIALNQHGTRALQKMIEFISTPEQIQTVIQALRD- 757
Query: 412 NVSMLLMHPFGNYVIQSAL 430
+V L+ GN+VIQ L
Sbjct: 758 HVVELVQDLNGNHVIQKCL 776
>gi|159130481|gb|EDP55594.1| RNA-binding protein, putative [Aspergillus fumigatus A1163]
Length = 1062
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/283 (42%), Positives = 177/283 (62%), Gaps = 3/283 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L RG + L KDQ+GCR+LQR + E +++IF E V ELM DPFGNY+ QKL
Sbjct: 643 LEHYRGELYTLCKDQHGCRYLQRKLEERNPEHVQLIFDETNMHVVELMTDPFGNYLCQKL 702
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E ++EQRT ++ N QLV+I LN HG RA+ K++E ++ P+QI V+ ALR
Sbjct: 703 LEFSNDEQRTALINNAAN---QLVKIALNQHGTRALQKMIEFISTPEQIQTVIQALRDHV 759
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L +D NG++VIQ C+ S ED +++ + V NC + T + GCCVLQ C++++ G Q
Sbjct: 760 VELVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQ 819
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R RL+A+I ANA L +D +GNYVVQ++L L P T L + G+ + S K+ SNV
Sbjct: 820 RARLIAQITANAFALVQDPFGNYVVQYILDLAEPHFTEPLCQAFRGNIPALSKQKFSSNV 879
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+E+CL + + ++I E+L + +L F NYV+Q+A+
Sbjct: 880 IEKCLRTAEFQMRRQMIDEMLAGTELEKMLRDSFANYVVQTAM 922
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 1/139 (0%)
Query: 292 TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYV 351
T + L Y + D+ GC LQ +E + + E + + L D +GNY+
Sbjct: 639 TNFPLEHYRGELYTLCKDQHGCRYLQRKLEERNPEHVQLIFDETNMHVVELMTDPFGNYL 698
Query: 352 VQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSP 411
Q LL + +L+ V + N++G+ +++ + + + +I+ LR
Sbjct: 699 CQKLLEFSNDEQRTALINNAANQLVKIALNQHGTRALQKMIEFISTPEQIQTVIQALRD- 757
Query: 412 NVSMLLMHPFGNYVIQSAL 430
+V L+ GN+VIQ L
Sbjct: 758 HVVELVQDLNGNHVIQKCL 776
>gi|71018695|ref|XP_759578.1| hypothetical protein UM03431.1 [Ustilago maydis 521]
gi|46099336|gb|EAK84569.1| hypothetical protein UM03431.1 [Ustilago maydis 521]
Length = 1058
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 124/285 (43%), Positives = 182/285 (63%), Gaps = 3/285 (1%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+ L DL+G+I AL KDQ+GCR LQ+ + +MIF E ELM DPFGNY+ Q
Sbjct: 536 TQLDDLQGDIFALCKDQHGCRFLQKKLEEGNPAHRDMIFSETFTHFAELMTDPFGNYLCQ 595
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
K++E C++EQR I+ ++ +LV I LN HG RAV K+++ L+ P+QI ++ AL
Sbjct: 596 KMLEYCTDEQRNLIVELVAP---ELVTISLNMHGTRAVQKMIDFLSTPRQIHSIIVALSM 652
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
VTL KD NG++V+Q C+ ED +++ N VA +C +AT + GCCVLQ C++++
Sbjct: 653 NVVTLIKDLNGNHVVQKCLNRLGAEDNQFIYNAVAAHCVEVATHRHGCCVLQRCIDHASE 712
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
AQR +LVAEI NAL L +D +GNYVVQ++L L +P+ T +++RQ G+ S K+ S
Sbjct: 713 AQRVQLVAEITYNALTLVQDPFGNYVVQYVLDLSIPRFTDAVVRQFVGNVCLLSVQKFSS 772
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
NV+E+C+ S ++I ELL + LL F NYV+Q++L
Sbjct: 773 NVIEKCIRVSEPGVRKQLIEELLNRTRLEKLLRDSFANYVVQTSL 817
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 6/215 (2%)
Query: 226 DDFQ--LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYC 283
DD Q + +C + HG R + K LE NP ++ + L D G+Y+ Q
Sbjct: 539 DDLQGDIFALCKDQHGCRFLQKKLEE-GNPAHRDMIFSETFTHFAELMTDPFGNYLCQKM 597
Query: 284 VKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGAQRERLVAEIIANALLL 342
+++ + E ++ VA I+ + G +Q +++ S Q ++ + N + L
Sbjct: 598 LEYCTDEQRNLIVELVAPELVTISLNMHGTRAVQKMIDFLSTPRQIHSIIVALSMNVVTL 657
Query: 343 AEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTR 402
+D GN+VVQ L + + + H V + +++G V++RC+ + E Q +
Sbjct: 658 IKDLNGNHVVQKCLNRLGAEDNQFIYNAVAAHCVEVATHRHGCCVLQRCIDHASEAQRVQ 717
Query: 403 IIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
++ E+ N L+ PFGNYV+Q L +S R
Sbjct: 718 LVAEITY--NALTLVQDPFGNYVVQYVLDLSIPRF 750
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
D L+++ + + + D+ GC LQ +E A R+ + +E + L D +GNY
Sbjct: 533 DATTQLDDLQGDIFALCKDQHGCRFLQKKLEEGNPAHRDMIFSETFTHFAELMTDPFGNY 592
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCL-LESGEEQSTRIIIELLR 409
+ Q +L + ++ + V+ S N +G+ V++ + S Q II+ L
Sbjct: 593 LCQKMLEYCTDEQRNLIVELVAPELVTISLNMHGTRAVQKMIDFLSTPRQIHSIIVAL-- 650
Query: 410 SPNVSMLLMHPFGNYVIQSAL 430
S NV L+ GN+V+Q L
Sbjct: 651 SMNVVTLIKDLNGNHVVQKCL 671
>gi|219887147|gb|ACL53948.1| unknown [Zea mays]
gi|413916364|gb|AFW56296.1| hypothetical protein ZEAMMB73_526143 [Zea mays]
Length = 685
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/303 (41%), Positives = 185/303 (61%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
SS+ ++ G + LAKDQ GCR LQR +E+ +F VI+ + ELM+DPFGNY++Q
Sbjct: 358 SSVDEVVGELYHLAKDQNGCRFLQRIFIEGSREDARKVFDGVIEHIDELMVDPFGNYLIQ 417
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
K+ E C++ Q+ IL +T QL+ + N HG R V K++E+++ ++S+V++AL
Sbjct: 418 KIFEKCNDNQKMHILYEITKIPGQLIEVACNMHGTRVVQKVIESISTSDEVSMVVSALSH 477
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
GA+TL D+NG +V + C+ S E +L+N C +A D+ GCC++Q C+ ++
Sbjct: 478 GAITLMMDSNGCHVAERCLLKLSPEGKAFLVNAATKYCVELAKDRQGCCIIQKCIAHASK 537
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
QR RL+ I AL LAED YGNYV+Q +L L V T +L +LEG Y S K S
Sbjct: 538 EQRNRLLYSITTRALELAEDEYGNYVIQFVLGLGVAWATNEVLDKLEGSYGYLSTQKCSS 597
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSSPPISV 445
NVVE+CL E+ E + RII+EL+ P + +L+ +GNYVIQ+AL S+ + I
Sbjct: 598 NVVEKCLREAPERERARIILELIHDPRLLNVLVDKYGNYVIQTALRESEGTAVEAALIRA 657
Query: 446 CKP 448
KP
Sbjct: 658 IKP 660
>gi|218186872|gb|EEC69299.1| hypothetical protein OsI_38363 [Oryza sativa Indica Group]
Length = 770
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/285 (41%), Positives = 184/285 (64%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
SS+ ++ G I LAKDQ GCR LQR + E ++ +F +I+ + EL++DPFGNY+VQ
Sbjct: 443 SSVDEVVGKIHLLAKDQNGCRFLQRIFTEGTSENVKKVFDGIIEHIGELVVDPFGNYLVQ 502
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E C+ +Q+ I+ +T QL++ + HG R V K++E + +P ++S+V+ AL
Sbjct: 503 KLLEECNHDQKMHIVYEITKRPGQLIKFSCDMHGTRVVQKVIETINSPDEVSMVVCALSS 562
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
GA+TL D NG +V C++ FSHE +LLN + + +A D+ GCC++Q C+ ++
Sbjct: 563 GAITLMMDANGCHVALRCLQKFSHEHKAFLLNVAMEYYFELAQDRQGCCIIQKCILHANK 622
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
Q+ +L+ I + AL L+E YGNYVVQ++L L + T +L +LEGH+ S S K S
Sbjct: 623 EQKNQLLYNITSRALELSEHQYGNYVVQYILDLHISWATDEILDKLEGHFGSLSMQKSSS 682
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
NVVE+CL E+ + +II EL+ P + +L+ P+GNYVIQ+AL
Sbjct: 683 NVVEKCLKEASWPKRVKIIHELINDPKLLHILIDPYGNYVIQTAL 727
>gi|367054818|ref|XP_003657787.1| hypothetical protein THITE_2123815 [Thielavia terrestris NRRL 8126]
gi|347005053|gb|AEO71451.1| hypothetical protein THITE_2123815 [Thielavia terrestris NRRL 8126]
Length = 1029
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/288 (42%), Positives = 184/288 (63%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F+ L + G I +L KDQ+GCR+LQ+ + + E+I MI++E V ELM DPFGNY
Sbjct: 600 FNNLPLEQVGGTIYSLCKDQHGCRYLQKQLENRIPEQIHMIWLETNQHVVELMTDPFGNY 659
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E C++++RT +++ N LVRI LN HG RA+ K++E++T P QI+L++ A
Sbjct: 660 LCQKLLEYCNDDERT---VLIQNASSDLVRIALNQHGTRALQKMIEHVTTPVQINLIVEA 716
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ S D ++ + V +C + T + GCCVLQ C+++
Sbjct: 717 LRNQVVELIQDLNGNHVIQKCLNKLSAADASFIFDAVGKHCVEVGTHRHGCCVLQRCIDH 776
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ GAQ+ L+ I A+A+ L +D +GNYVVQ+++ L T L++Q + + S +K
Sbjct: 777 ADGAQKVWLIERITAHAVTLVQDPFGNYVVQYVIDLNEETFTEPLVQQFQNRIAALSKHK 836
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNVVE+CL + E+ I+ ELL + LL FGNYVIQ+AL
Sbjct: 837 FSSNVVEKCLRCASEQSRDMIVSELLAPGEIERLLRDSFGNYVIQTAL 884
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 4/226 (1%)
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
V+Q ++ SE L L + +C + HG R + K LEN P+QI ++
Sbjct: 585 VIQSRRQMDSEAMARFNNLPLEQVGGTIYSLCKDQHGCRYLQKQLENRI-PEQIHMIWLE 643
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
V L D G+Y+ Q +++ + ++ L+ + + IA ++ G LQ +E+
Sbjct: 644 TNQHVVELMTDPFGNYLCQKLLEYCNDDERTVLIQNASSDLVRIALNQHGTRALQKMIEH 703
Query: 323 SKGAQRERLVAEIIANALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
+ L+ E + N ++ L +D GN+V+Q L + + + H V +
Sbjct: 704 VTTPVQINLIVEALRNQVVELIQDLNGNHVIQKCLNKLSAADASFIFDAVGKHCVEVGTH 763
Query: 382 KYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQ 427
++G V++RC+ + Q +I + + + L+ PFGNYV+Q
Sbjct: 764 RHGCCVLQRCIDHADGAQKVWLIERI--TAHAVTLVQDPFGNYVVQ 807
>gi|297852022|ref|XP_002893892.1| hypothetical protein ARALYDRAFT_891233 [Arabidopsis lyrata subsp.
lyrata]
gi|297339734|gb|EFH70151.1| hypothetical protein ARALYDRAFT_891233 [Arabidopsis lyrata subsp.
lyrata]
Length = 555
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 145/362 (40%), Positives = 218/362 (60%), Gaps = 18/362 (4%)
Query: 84 FSHPCQEAEPINQDSSILNLLHNHNFDGLRSNGNELSSVPRNQWMSSLSLKRNQWLQDSF 143
S PC + + D+ I F+G R + E S++ R +++ K N L
Sbjct: 162 ISLPCHRSVSFSNDALI--------FEGNRGSYPEQSTLMR-RYLKEDEPKINGGL--PL 210
Query: 144 DCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYV 203
+ S+ ++ G++ +AKDQ GCR LQ+ + E ++IF E+ID V EL +DPFGNY+
Sbjct: 211 NLVSMVEIYGSVNLMAKDQIGCRVLQKLVKEGTILEAKVIFHEIIDHVVELSMDPFGNYI 270
Query: 204 VQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL 263
VQKL+++ EEQRT I+ +LT +L++ICLNT+G R V K+++ + QQI+LV + L
Sbjct: 271 VQKLLDVSDEEQRTMIVSVLTLTPRELIKICLNTYGTRVVQKMIKTVKTKQQIALVKSGL 330
Query: 264 RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
+PG + L D NG +V+Q C++ DTK++L C IAT + GC VLQ C+ +
Sbjct: 331 KPGFLALVNDLNGSHVLQSCLEFLGPNDTKFVLEAATKYCAEIATHRHGCRVLQCCLINT 390
Query: 324 KGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
G Q +RLVAEI+ N+ L++D +GNYVVQ L+ +V + +LL Q HY + K+
Sbjct: 391 VGPQNDRLVAEILRNSHHLSQDPFGNYVVQCLIEQQVSAV--NLLVQFRTHYAELATQKF 448
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSSPPI 443
S+V+E+CL + E ++ I+ ELL PN LL P+GNYVIQ+AL V+KV SP I
Sbjct: 449 SSHVIEKCLRKYPESRA-EIVRELLSIPNFEQLLQDPYGNYVIQTALSVTKV----SPKI 503
Query: 444 SV 445
+
Sbjct: 504 CI 505
>gi|336272059|ref|XP_003350787.1| hypothetical protein SMAC_12592 [Sordaria macrospora k-hell]
gi|380094950|emb|CCC07452.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 670
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 182/288 (63%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F+ L + G I L KDQ+GCR+LQ+ + +E+I MI++E V ELM DPFGNY
Sbjct: 235 FNNLPLEQVVGTIYTLCKDQHGCRYLQKKLDDRNEEQIHMIWLETNQHVIELMTDPFGNY 294
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+ELCSE++RT ++ T D +VRI LN HG RA+ K+++++++P QI+L++ A
Sbjct: 295 LCQKLLELCSEDERTVLIRNATPD---MVRIALNAHGTRALQKMIDSVSSPVQINLIIEA 351
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ D ++ + V NC + T + GCCVLQ C+++
Sbjct: 352 LRNRVVELIQDLNGNHVIQKCLNKLDATDASFIFDAVGQNCVEVGTHRHGCCVLQRCIDH 411
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G+++ L+ I ANA+ L +D +GNYVVQ+++ L P T L+RQ G S +K
Sbjct: 412 ADGSKKIWLIERITANAVTLVQDPFGNYVVQYIIDLNEPSFTEPLVRQFLGRIPQLSKHK 471
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNVVE+CL + I+ E++ + L+ +GNYV+Q+AL
Sbjct: 472 FSSNVVEKCLRCASPNSKDMIVSEIMSQNEIKQLMQDSYGNYVVQTAL 519
>gi|242808097|ref|XP_002485092.1| RNA-binding protein, putative [Talaromyces stipitatus ATCC 10500]
gi|218715717|gb|EED15139.1| RNA-binding protein, putative [Talaromyces stipitatus ATCC 10500]
Length = 1001
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 127/326 (38%), Positives = 190/326 (58%), Gaps = 8/326 (2%)
Query: 109 FDGLRSNG----NELSSVPRNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYG 164
+ G NG S+ P N ++ Q + F+ L +G + L KDQ+G
Sbjct: 538 YSGFSQNGMYQLPRASARPNNAALNRGGESEAQQI-SRFNNLPLEQYKGELYGLCKDQHG 596
Query: 165 CRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLT 224
CR+LQR + E ++MIF E V ELM DPFGNY+ QKL+E +++QRTR ++
Sbjct: 597 CRYLQRKLEERNPEHVQMIFAETHMHVVELMTDPFGNYLCQKLLEYSNDDQRTR---LIH 653
Query: 225 NDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCV 284
N QLV I LN HG RA+ K++E ++ PQQI +V+ ALR V L +D NG++VIQ C+
Sbjct: 654 NAAPQLVPIALNQHGTRALQKMIEFVSTPQQIQMVIDALRGHVVDLVQDLNGNHVIQKCL 713
Query: 285 KHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAE 344
S ED +++ + V +C + T + GCCVLQ C++++ G QR RL+A+I +NA L +
Sbjct: 714 NRLSAEDAQFIYDAVGAHCVIVGTHRHGCCVLQRCIDHASGEQRARLIAQITSNAFSLVQ 773
Query: 345 DCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRII 404
D +GNYVVQ++L L P T L + G+ S K+ SNV+E+CL + R+I
Sbjct: 774 DPFGNYVVQYILDLSEPHFTEPLCQSFLGNIPPLSKQKFSSNVIEKCLRTAEYPMRRRMI 833
Query: 405 IELLRSPNVSMLLMHPFGNYVIQSAL 430
E+L + +L + NYV+Q+A+
Sbjct: 834 DEILVPRELDAMLRDSYANYVVQTAM 859
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 4/207 (1%)
Query: 229 QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFS 288
+L +C + HG R + + LE NP+ + ++ A V L D G+Y+ Q +++ +
Sbjct: 586 ELYGLCKDQHGCRYLQRKLEE-RNPEHVQMIFAETHMHVVELMTDPFGNYLCQKLLEYSN 644
Query: 289 HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALL-LAEDCY 347
+ L++ A IA ++ G LQ +E+ Q+ ++V + + ++ L +D
Sbjct: 645 DDQRTRLIHNAAPQLVPIALNQHGTRALQKMIEFVSTPQQIQMVIDALRGHVVDLVQDLN 704
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GN+V+Q L + + + H V +++G V++RC+ + EQ R+I ++
Sbjct: 705 GNHVIQKCLNRLSAEDAQFIYDAVGAHCVIVGTHRHGCCVLQRCIDHASGEQRARLIAQI 764
Query: 408 LRSPNVSMLLMHPFGNYVIQSALLVSK 434
N L+ PFGNYV+Q L +S+
Sbjct: 765 TS--NAFSLVQDPFGNYVVQYILDLSE 789
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 114/287 (39%), Gaps = 51/287 (17%)
Query: 73 VHHFPLVENGFFSHPCQEAEPINQDSSILNLLHNHNFDGLRSNGNELSSVPRNQWMSSLS 132
+H L+ + F ++ CQ+ + D L+HN +L + NQ +
Sbjct: 621 MHVVELMTDPFGNYLCQKLLEYSNDDQRTRLIHNA--------APQLVPIALNQHGTRAL 672
Query: 133 LKRNQWLQDSFDCSSLRD-LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRV 191
K +++ + D LRG++V L +D G +Q+ ++ L E+ + I+ V
Sbjct: 673 QKMIEFVSTPQQIQMVIDALRGHVVDLVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGAHC 732
Query: 192 CELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLT 251
+ G V+Q+ ++ S EQR R++ +T++ F LV
Sbjct: 733 VIVGTHRHGCCVLQRCIDHASGEQRARLIAQITSNAFSLV-------------------- 772
Query: 252 NPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKS 311
+D G+YV+QY + T+ L N ++ K
Sbjct: 773 --------------------QDPFGNYVVQYILDLSEPHFTEPLCQSFLGNIPPLSKQKF 812
Query: 312 GCCVLQHCVEYSKGAQRERLVAEIIANALLLA--EDCYGNYVVQHLL 356
V++ C+ ++ R R++ EI+ L A D Y NYVVQ +
Sbjct: 813 SSNVIEKCLRTAEYPMRRRMIDEILVPRELDAMLRDSYANYVVQTAM 859
>gi|449300578|gb|EMC96590.1| hypothetical protein BAUCODRAFT_24332 [Baudoinia compniacensis UAMH
10762]
Length = 1160
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 116/295 (39%), Positives = 181/295 (61%), Gaps = 3/295 (1%)
Query: 136 NQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELM 195
N+ Q ++ ++ L G I +L KDQ+GCR+LQR + +E++FVE+ D + ELM
Sbjct: 701 NEEAQTRYNSLTVGQLTGEIYSLCKDQHGCRYLQRKLDERADNAVEIVFVEIKDHIIELM 760
Query: 196 IDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ 255
DPFGNY+ QKL+E +EQRT +++ N + +I LN HG RA+ K++E ++ PQQ
Sbjct: 761 TDPFGNYLCQKLLECTDDEQRT---VLIKNSASSMTKIALNQHGTRALQKMIEYISTPQQ 817
Query: 256 ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCV 315
I +++ ALR V L +D NG++VIQ C+ H S E+ +++ + V NC + T + GCCV
Sbjct: 818 IQIIIEALRYDVVLLIQDLNGNHVIQKCLNHLSPENAQFIFDSVGTNCIAVGTHRHGCCV 877
Query: 316 LQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHY 375
LQ C++++ G Q+ LV ++I NA L +D +GNYVVQ++L L P T L +
Sbjct: 878 LQRCIDHASGLQKGALVDQVINNAFALVQDPFGNYVVQYILDLGEPCFTEPLCQSFAHQV 937
Query: 376 VSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
S K+ SNVVE+C+ + +I+E+ ++MLL F NYV+Q+A+
Sbjct: 938 AYLSKQKFSSNVVEKCIRCATGNVRRAVILEIAEPRELAMLLRDSFANYVVQTAM 992
>gi|242808102|ref|XP_002485093.1| RNA-binding protein, putative [Talaromyces stipitatus ATCC 10500]
gi|218715718|gb|EED15140.1| RNA-binding protein, putative [Talaromyces stipitatus ATCC 10500]
Length = 1029
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 127/326 (38%), Positives = 190/326 (58%), Gaps = 8/326 (2%)
Query: 109 FDGLRSNG----NELSSVPRNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYG 164
+ G NG S+ P N ++ Q + F+ L +G + L KDQ+G
Sbjct: 538 YSGFSQNGMYQLPRASARPNNAALNRGGESEAQQI-SRFNNLPLEQYKGELYGLCKDQHG 596
Query: 165 CRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLT 224
CR+LQR + E ++MIF E V ELM DPFGNY+ QKL+E +++QRTR ++
Sbjct: 597 CRYLQRKLEERNPEHVQMIFAETHMHVVELMTDPFGNYLCQKLLEYSNDDQRTR---LIH 653
Query: 225 NDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCV 284
N QLV I LN HG RA+ K++E ++ PQQI +V+ ALR V L +D NG++VIQ C+
Sbjct: 654 NAAPQLVPIALNQHGTRALQKMIEFVSTPQQIQMVIDALRGHVVDLVQDLNGNHVIQKCL 713
Query: 285 KHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAE 344
S ED +++ + V +C + T + GCCVLQ C++++ G QR RL+A+I +NA L +
Sbjct: 714 NRLSAEDAQFIYDAVGAHCVIVGTHRHGCCVLQRCIDHASGEQRARLIAQITSNAFSLVQ 773
Query: 345 DCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRII 404
D +GNYVVQ++L L P T L + G+ S K+ SNV+E+CL + R+I
Sbjct: 774 DPFGNYVVQYILDLSEPHFTEPLCQSFLGNIPPLSKQKFSSNVIEKCLRTAEYPMRRRMI 833
Query: 405 IELLRSPNVSMLLMHPFGNYVIQSAL 430
E+L + +L + NYV+Q+A+
Sbjct: 834 DEILVPRELDAMLRDSYANYVVQTAM 859
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 4/207 (1%)
Query: 229 QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFS 288
+L +C + HG R + + LE NP+ + ++ A V L D G+Y+ Q +++ +
Sbjct: 586 ELYGLCKDQHGCRYLQRKLEE-RNPEHVQMIFAETHMHVVELMTDPFGNYLCQKLLEYSN 644
Query: 289 HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALL-LAEDCY 347
+ L++ A IA ++ G LQ +E+ Q+ ++V + + ++ L +D
Sbjct: 645 DDQRTRLIHNAAPQLVPIALNQHGTRALQKMIEFVSTPQQIQMVIDALRGHVVDLVQDLN 704
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GN+V+Q L + + + H V +++G V++RC+ + EQ R+I ++
Sbjct: 705 GNHVIQKCLNRLSAEDAQFIYDAVGAHCVIVGTHRHGCCVLQRCIDHASGEQRARLIAQI 764
Query: 408 LRSPNVSMLLMHPFGNYVIQSALLVSK 434
N L+ PFGNYV+Q L +S+
Sbjct: 765 TS--NAFSLVQDPFGNYVVQYILDLSE 789
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 114/287 (39%), Gaps = 51/287 (17%)
Query: 73 VHHFPLVENGFFSHPCQEAEPINQDSSILNLLHNHNFDGLRSNGNELSSVPRNQWMSSLS 132
+H L+ + F ++ CQ+ + D L+HN +L + NQ +
Sbjct: 621 MHVVELMTDPFGNYLCQKLLEYSNDDQRTRLIHNA--------APQLVPIALNQHGTRAL 672
Query: 133 LKRNQWLQDSFDCSSLRD-LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRV 191
K +++ + D LRG++V L +D G +Q+ ++ L E+ + I+ V
Sbjct: 673 QKMIEFVSTPQQIQMVIDALRGHVVDLVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGAHC 732
Query: 192 CELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLT 251
+ G V+Q+ ++ S EQR R++ +T++ F LV
Sbjct: 733 VIVGTHRHGCCVLQRCIDHASGEQRARLIAQITSNAFSLV-------------------- 772
Query: 252 NPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKS 311
+D G+YV+QY + T+ L N ++ K
Sbjct: 773 --------------------QDPFGNYVVQYILDLSEPHFTEPLCQSFLGNIPPLSKQKF 812
Query: 312 GCCVLQHCVEYSKGAQRERLVAEIIANALLLA--EDCYGNYVVQHLL 356
V++ C+ ++ R R++ EI+ L A D Y NYVVQ +
Sbjct: 813 SSNVIEKCLRTAEYPMRRRMIDEILVPRELDAMLRDSYANYVVQTAM 859
>gi|115396764|ref|XP_001214021.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114193590|gb|EAU35290.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1019
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 177/283 (62%), Gaps = 3/283 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L RG + L KDQ+GCR+LQR + E ++MIF E V ELM DPFGNY+ QKL
Sbjct: 602 LEHYRGELYGLCKDQHGCRYLQRKLEERNAEHVQMIFEETHLHVVELMTDPFGNYLCQKL 661
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E ++EQRT ++ N QLV+I LN HG RA+ K++E ++ P+Q + V+ +L+
Sbjct: 662 LEYSNDEQRT---TLINNAAHQLVKIALNQHGTRALQKMIEFISTPEQTTTVIQSLQDHV 718
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L +D NG++VIQ C+ S ED +++ + V NC + T + GCCVLQ C++++ G Q
Sbjct: 719 VELVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQ 778
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R RL+A+I +NA L +D +GNYVVQ++L L P T L + G+ + S K+ SNV
Sbjct: 779 RARLIAQITSNAFALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNV 838
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+E+CL + + ++I E+L + +L F NYV+Q+A+
Sbjct: 839 IEKCLRTADVQIRRQMIDEMLAGNELEKMLRDSFANYVVQTAM 881
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
Query: 292 TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYV 351
T + L YG+ D+ GC LQ +E + + E + + L D +GNY+
Sbjct: 598 TNFPLEHYRGELYGLCKDQHGCRYLQRKLEERNAEHVQMIFEETHLHVVELMTDPFGNYL 657
Query: 352 VQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCL-LESGEEQSTRIIIELLRS 410
Q LL + +L+ V + N++G+ +++ + S EQ+T +I L
Sbjct: 658 CQKLLEYSNDEQRTTLINNAAHQLVKIALNQHGTRALQKMIEFISTPEQTTTVIQSL--Q 715
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
+V L+ GN+VIQ L
Sbjct: 716 DHVVELVQDLNGNHVIQKCL 735
>gi|388855017|emb|CCF51344.1| uncharacterized protein [Ustilago hordei]
Length = 1013
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 186/297 (62%), Gaps = 7/297 (2%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
+ L DL+G+I AL KDQ+GCR LQ+ + +MIF E ELM DPFGNY+
Sbjct: 525 TTQLEDLQGDIFALCKDQHGCRFLQKKLEESMPAHRDMIFSETFTHFAELMTDPFGNYLC 584
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK++E C++EQR I+ ++ +LV I LN HG RAV K+++ L+ +QI ++ AL
Sbjct: 585 QKMLEYCTDEQRNLIVELVAP---ELVTISLNMHGTRAVQKMIDFLSTRRQIHSIIVALS 641
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
VTL KD NG++V+Q C+ ED +++ N VA +C +AT + GCCVLQ C++++
Sbjct: 642 MNVVTLIKDLNGNHVVQKCLNRLGAEDNQFIYNAVAAHCVEVATHRHGCCVLQRCIDHAS 701
Query: 325 GAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
+QR +LVAEI NAL L +D +GNYVVQ++L L +P+ T +++RQ G+ S K+
Sbjct: 702 ESQRVQLVAEITYNALTLVQDPFGNYVVQYVLDLSIPRFTDAVVRQFVGNVCLLSVQKFS 761
Query: 385 SNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL----LVSKVRL 437
SNV+E+C+ S ++I ELL + LL F NYV+Q++L V ++RL
Sbjct: 762 SNVIEKCIRVSEPGVRKQLIEELLNRTRLEKLLRDSFANYVVQTSLDYADAVQRMRL 818
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 7/227 (3%)
Query: 212 SEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLT 271
+E + T L L D F L C + HG R + K LE + P ++ + L
Sbjct: 520 AELEATTQLEDLQGDIFAL---CKDQHGCRFLQKKLEE-SMPAHRDMIFSETFTHFAELM 575
Query: 272 KDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGAQRER 330
D G+Y+ Q +++ + E ++ VA I+ + G +Q +++ S Q
Sbjct: 576 TDPFGNYLCQKMLEYCTDEQRNLIVELVAPELVTISLNMHGTRAVQKMIDFLSTRRQIHS 635
Query: 331 LVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
++ + N + L +D GN+VVQ L + + + H V + +++G V++R
Sbjct: 636 IIVALSMNVVTLIKDLNGNHVVQKCLNRLGAEDNQFIYNAVAAHCVEVATHRHGCCVLQR 695
Query: 391 CLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
C+ + E Q +++ E+ N L+ PFGNYV+Q L +S R
Sbjct: 696 CIDHASESQRVQLVAEITY--NALTLVQDPFGNYVVQYVLDLSIPRF 740
>gi|393247747|gb|EJD55254.1| ARM repeat-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 1028
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 126/288 (43%), Positives = 177/288 (61%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F + L DL+G I +L KDQ+GCR+LQ+ + E ++IF E ELM DPFGNY
Sbjct: 574 FAGTRLEDLQGEIASLCKDQHGCRYLQKKLEEGVPEHRDIIFHETFGHFAELMTDPFGNY 633
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKLVE S+EQR I + D LV I LN HG RAV K+++ L+ P+QI ++ A
Sbjct: 634 LCQKLVEFSSDEQRNVICESVAQD---LVTISLNMHGTRAVQKMIDFLSTPRQIHAIIVA 690
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L VTL KD NG++VIQ C+ ED +++ N VA NC +AT + GCCVLQ C+++
Sbjct: 691 LSLHVVTLIKDLNGNHVIQKCLNKLVPEDNQFIYNAVAQNCVEVATHRHGCCVLQRCIDH 750
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ +QR +LV EI NAL L +D YGNYVVQ++L L + + ++RQ G+ + S K
Sbjct: 751 ASDSQRVQLVQEITYNALTLVQDPYGNYVVQYILDLNDNRFSDGVIRQFSGNVCALSVQK 810
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+C+ + +I ELL + LL FGNY +Q+AL
Sbjct: 811 FSSNVIEKCVRVAEPHTRKLLIDELLHRNRLEKLLRDSFGNYCVQTAL 858
>gi|391870982|gb|EIT80151.1| RNA-binding protein, putative [Aspergillus oryzae 3.042]
Length = 992
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 174/283 (61%), Gaps = 3/283 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L RG + L KDQ+GCR+LQR + + ++MIF E V ELM DPFGNY+ QKL
Sbjct: 584 LEHYRGELYGLCKDQHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYLCQKL 643
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E ++EQRT ++ N QLV+I LN HG RA+ K++E ++ P+Q V+ AL
Sbjct: 644 LEYSNDEQRT---ALINNAAHQLVKIALNQHGTRALQKMIEFISTPEQTQTVIHALEDHV 700
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L +D NG++VIQ C+ S ED +++ + V NC + T + GCCVLQ C++++ G Q
Sbjct: 701 VELVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQ 760
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R RL+A+I +NA L +D +GNYVVQ++L L P T L + G+ + S K+ SNV
Sbjct: 761 RARLIAQITSNAFALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNV 820
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+E+CL + ++I E+L + +L F NYV+Q+A+
Sbjct: 821 IEKCLRTADGPVRGQLIEEMLSGSELEKMLRDSFANYVVQTAM 863
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 1/139 (0%)
Query: 292 TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYV 351
T + L YG+ D+ GC LQ +E + + E + + L D +GNY+
Sbjct: 580 TNFPLEHYRGELYGLCKDQHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYL 639
Query: 352 VQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSP 411
Q LL + +L+ V + N++G+ +++ + + T+ +I L
Sbjct: 640 CQKLLEYSNDEQRTALINNAAHQLVKIALNQHGTRALQKMIEFISTPEQTQTVIHALED- 698
Query: 412 NVSMLLMHPFGNYVIQSAL 430
+V L+ GN+VIQ L
Sbjct: 699 HVVELVQDLNGNHVIQKCL 717
>gi|115488610|ref|NP_001066792.1| Os12g0488900 [Oryza sativa Japonica Group]
gi|108862690|gb|ABA98278.2| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649299|dbj|BAF29811.1| Os12g0488900 [Oryza sativa Japonica Group]
gi|215697156|dbj|BAG91150.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222617094|gb|EEE53226.1| hypothetical protein OsJ_36125 [Oryza sativa Japonica Group]
Length = 769
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/285 (41%), Positives = 183/285 (64%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
SS+ ++ G I LAKDQ GCR LQR + E ++ +F +I+ + EL++DPFGNY+VQ
Sbjct: 442 SSVDEVVGKIHLLAKDQNGCRFLQRIFTEGTSENVKKVFDGIIEHIGELVVDPFGNYLVQ 501
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E C+ +Q+ I+ +T QL++ + HG R V K++E + +P ++S+V+ AL
Sbjct: 502 KLLEECNHDQKMHIVYEITKRPGQLIKFSCDMHGTRVVQKVIETINSPDEVSMVVCALSS 561
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
GA+TL D NG +V C++ FSHE +LLN + + +A D+ GCC++Q C+ ++
Sbjct: 562 GAITLMMDANGCHVALRCLQKFSHEHKAFLLNVAMEYYFELAQDRQGCCIIQKCILHANK 621
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
Q+ +L+ I + AL L+E YGNYVVQ++L L + T +L +LE H+ S S K S
Sbjct: 622 EQKNQLLYNITSRALELSEHQYGNYVVQYILDLHISWATDEILDKLEDHFGSLSMQKSSS 681
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
NVVE+CL E+ + +II EL+ P + +L+ P+GNYVIQ+AL
Sbjct: 682 NVVEKCLKEASWPKRVKIIHELINDPKLLHILIDPYGNYVIQTAL 726
>gi|317141237|ref|XP_001817859.2| RNA-binding protein [Aspergillus oryzae RIB40]
Length = 992
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 174/283 (61%), Gaps = 3/283 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L RG + L KDQ+GCR+LQR + + ++MIF E V ELM DPFGNY+ QKL
Sbjct: 584 LEHYRGELYGLCKDQHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYLCQKL 643
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E ++EQRT ++ N QLV+I LN HG RA+ K++E ++ P+Q V+ AL
Sbjct: 644 LEYSNDEQRT---ALINNAAHQLVKIALNQHGTRALQKMIEFISTPEQTQTVIHALEDHV 700
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L +D NG++VIQ C+ S ED +++ + V NC + T + GCCVLQ C++++ G Q
Sbjct: 701 VELVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQ 760
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R RL+A+I +NA L +D +GNYVVQ++L L P T L + G+ + S K+ SNV
Sbjct: 761 RARLIAQITSNAFALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNV 820
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+E+CL + ++I E+L + +L F NYV+Q+A+
Sbjct: 821 IEKCLRTADGPVRGQLIEEMLSGSELEKMLRDSFANYVVQTAM 863
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 1/139 (0%)
Query: 292 TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYV 351
T + L YG+ D+ GC LQ +E + + E + + L D +GNY+
Sbjct: 580 TNFPLEHYRGELYGLCKDQHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYL 639
Query: 352 VQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSP 411
Q LL + +L+ V + N++G+ +++ + + T+ +I L
Sbjct: 640 CQKLLEYSNDEQRTALINNAAHQLVKIALNQHGTRALQKMIEFISTPEQTQTVIHALED- 698
Query: 412 NVSMLLMHPFGNYVIQSAL 430
+V L+ GN+VIQ L
Sbjct: 699 HVVELVQDLNGNHVIQKCL 717
>gi|212537853|ref|XP_002149082.1| RNA-binding protein, putative [Talaromyces marneffei ATCC 18224]
gi|210068824|gb|EEA22915.1| RNA-binding protein, putative [Talaromyces marneffei ATCC 18224]
Length = 1026
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F+ L RG + L KDQ+GCR+LQR + + ++MIF E V ELM DPFGNY
Sbjct: 602 FNNLPLEQYRGELYGLCKDQHGCRYLQRKLEERNADHVQMIFEETHMHVVELMTDPFGNY 661
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E +++QRTR ++ N QLV I LN HG RA+ K++E ++ PQQI +V+ A
Sbjct: 662 LCQKLLEYSNDDQRTR---LIHNAAPQLVPIALNQHGTRALQKMIEFVSTPQQIRMVIDA 718
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ S ED +++ + V +C + T + GCCVLQ C+++
Sbjct: 719 LRGHVVDLVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGAHCVIVGTHRHGCCVLQRCIDH 778
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G QR RL+A+I +NA L +D +GNYVVQ++L L P T L + G+ + S K
Sbjct: 779 ASGEQRARLIAQITSNAFSLVQDPFGNYVVQYILDLSEPHFTDPLCQSFLGNIPALSKQK 838
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+CL + R+I E+L + +L + NYV+Q+A+
Sbjct: 839 FSSNVIEKCLRTAEYPMRCRMIDEILVPRELDAMLRDSYANYVVQTAM 886
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 100/207 (48%), Gaps = 4/207 (1%)
Query: 229 QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFS 288
+L +C + HG R + + LE N + ++ V L D G+Y+ Q +++ +
Sbjct: 613 ELYGLCKDQHGCRYLQRKLEE-RNADHVQMIFEETHMHVVELMTDPFGNYLCQKLLEYSN 671
Query: 289 HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALL-LAEDCY 347
+ L++ A IA ++ G LQ +E+ Q+ R+V + + ++ L +D
Sbjct: 672 DDQRTRLIHNAAPQLVPIALNQHGTRALQKMIEFVSTPQQIRMVIDALRGHVVDLVQDLN 731
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GN+V+Q L + + + H V +++G V++RC+ + EQ R+I ++
Sbjct: 732 GNHVIQKCLNRLSAEDAQFIYDAVGAHCVIVGTHRHGCCVLQRCIDHASGEQRARLIAQI 791
Query: 408 LRSPNVSMLLMHPFGNYVIQSALLVSK 434
N L+ PFGNYV+Q L +S+
Sbjct: 792 TS--NAFSLVQDPFGNYVVQYILDLSE 816
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 113/287 (39%), Gaps = 51/287 (17%)
Query: 73 VHHFPLVENGFFSHPCQEAEPINQDSSILNLLHNHNFDGLRSNGNELSSVPRNQWMSSLS 132
+H L+ + F ++ CQ+ + D L+HN +L + NQ +
Sbjct: 648 MHVVELMTDPFGNYLCQKLLEYSNDDQRTRLIHNA--------APQLVPIALNQHGTRAL 699
Query: 133 LKRNQWLQDSFDCSSLRD-LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRV 191
K +++ + D LRG++V L +D G +Q+ ++ L E+ + I+ V
Sbjct: 700 QKMIEFVSTPQQIRMVIDALRGHVVDLVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGAHC 759
Query: 192 CELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLT 251
+ G V+Q+ ++ S EQR R++ +T++ F LV
Sbjct: 760 VIVGTHRHGCCVLQRCIDHASGEQRARLIAQITSNAFSLV-------------------- 799
Query: 252 NPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKS 311
+D G+YV+QY + T L N ++ K
Sbjct: 800 --------------------QDPFGNYVVQYILDLSEPHFTDPLCQSFLGNIPALSKQKF 839
Query: 312 GCCVLQHCVEYSKGAQRERLVAEIIANALLLA--EDCYGNYVVQHLL 356
V++ C+ ++ R R++ EI+ L A D Y NYVVQ +
Sbjct: 840 SSNVIEKCLRTAEYPMRCRMIDEILVPRELDAMLRDSYANYVVQTAM 886
>gi|238483549|ref|XP_002373013.1| RNA-binding protein, putative [Aspergillus flavus NRRL3357]
gi|220701063|gb|EED57401.1| RNA-binding protein, putative [Aspergillus flavus NRRL3357]
Length = 911
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 174/283 (61%), Gaps = 3/283 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L RG + L KDQ+GCR+LQR + + ++MIF E V ELM DPFGNY+ QKL
Sbjct: 503 LEHYRGELYGLCKDQHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYLCQKL 562
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E ++EQRT ++ N QLV+I LN HG RA+ K++E ++ P+Q V+ AL
Sbjct: 563 LEYSNDEQRT---ALINNAAHQLVKIALNQHGTRALQKMIEFISTPEQTQTVIHALEDHV 619
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L +D NG++VIQ C+ S ED +++ + V NC + T + GCCVLQ C++++ G Q
Sbjct: 620 VELVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQ 679
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R RL+A+I +NA L +D +GNYVVQ++L L P T L + G+ + S K+ SNV
Sbjct: 680 RARLIAQITSNAFALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNV 739
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+E+CL + ++I E+L + +L F NYV+Q+A+
Sbjct: 740 IEKCLRTADGPVRGQLIEEMLSGSELEKMLRDSFANYVVQTAM 782
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 1/139 (0%)
Query: 292 TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYV 351
T + L YG+ D+ GC LQ +E + + E + + L D +GNY+
Sbjct: 499 TNFPLEHYRGELYGLCKDQHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYL 558
Query: 352 VQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSP 411
Q LL + +L+ V + N++G+ +++ + + T+ +I L
Sbjct: 559 CQKLLEYSNDEQRTALINNAAHQLVKIALNQHGTRALQKMIEFISTPEQTQTVIHALED- 617
Query: 412 NVSMLLMHPFGNYVIQSAL 430
+V L+ GN+VIQ L
Sbjct: 618 HVVELVQDLNGNHVIQKCL 636
>gi|121703235|ref|XP_001269882.1| RNA-binding protein, putative [Aspergillus clavatus NRRL 1]
gi|119398025|gb|EAW08456.1| RNA-binding protein, putative [Aspergillus clavatus NRRL 1]
Length = 1002
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/324 (39%), Positives = 190/324 (58%), Gaps = 12/324 (3%)
Query: 109 FDGLR-SNGNELSSVPR-NQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCR 166
+ G R + G S+ PR N S L R F L RG + +L KDQ+GCR
Sbjct: 549 YAGFRLAEGQAKSAAPRRNGDTESSQLSR-------FTNFPLEHYRGELYSLCKDQHGCR 601
Query: 167 HLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTND 226
+LQR + E +++IF E V ELM DPFGNY+ QKL+E +++QRT ++ N
Sbjct: 602 YLQRKLEERDPEHVQLIFDETHLHVVELMTDPFGNYLCQKLLEYSNDDQRT---ALINNA 658
Query: 227 DFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKH 286
QLV+I LN HG RA+ K++E ++ +Q V+ ALR V L +D NG++VIQ C+
Sbjct: 659 AHQLVKIALNQHGTRALQKMIEFISTAEQTQTVIQALRDHVVELVQDLNGNHVIQKCLNR 718
Query: 287 FSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDC 346
S ED +++ + V NC + T + GCCVLQ C++++ G QR RL+A+I +NA L +D
Sbjct: 719 LSAEDAQFIYDAVGGNCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQITSNAFALVQDP 778
Query: 347 YGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIE 406
+GNYVVQ++L L P T L + G+ + S K+ SNV+E+CL + + ++I E
Sbjct: 779 FGNYVVQYILDLAEPHFTEPLCQSFRGNIPALSKQKFSSNVIEKCLRTADFQIKRQMIDE 838
Query: 407 LLRSPNVSMLLMHPFGNYVIQSAL 430
+L + +L F NYV+Q+A+
Sbjct: 839 MLVGVELEKMLRDSFANYVVQTAM 862
>gi|297809043|ref|XP_002872405.1| hypothetical protein ARALYDRAFT_351970 [Arabidopsis lyrata subsp.
lyrata]
gi|297318242|gb|EFH48664.1| hypothetical protein ARALYDRAFT_351970 [Arabidopsis lyrata subsp.
lyrata]
Length = 433
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/284 (44%), Positives = 189/284 (66%), Gaps = 3/284 (1%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+R +++ AKD+ R LQ ++ KE I+ IF +I VCELM+DPFG+ V +KL+E
Sbjct: 118 IRNTLLSRAKDRIESRLLQDVIAKGSKETIDKIFDNLISNVCELMLDPFGHRVFEKLMEK 177
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
C++EQ TR+L ++ Q VR+C+++HG RA+ L+ +L + +QI+ +A L A+ L
Sbjct: 178 CTDEQITRVLDIVLQQPLQFVRLCVDSHGTRAIQDLMRSLCSVEQIARFMATLCHVALLL 237
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
TKD N + VI +C HFS ++YLL + NCY +A D+ G C+L C+ S R+
Sbjct: 238 TKDANANLVILFCFNHFSPSHSRYLLEVIVQNCYQVAIDQHGYCMLNQCIRQSSRELRDP 297
Query: 331 LVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
L+ EII N + L ++CYGNYVVQ++L L ++T++L + L+G+YV S +KYGS+VV++
Sbjct: 298 LIKEIITNVVRLCKNCYGNYVVQYVLDLEDCEVTSALSKHLDGNYVQLSYDKYGSHVVQK 357
Query: 391 CLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
C LE+ E S RII ELL ++ LL+ PFGNYVIQ+A +VS+
Sbjct: 358 C-LENREFCSRRIIAELL--SDIDSLLVDPFGNYVIQTAWIVSE 398
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 12/116 (10%)
Query: 137 QWLQDSFDC---SSL-RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEI--EMIFVEVIDR 190
Q++ D DC S+L + L GN V L+ D+YG +Q+ L E I E++
Sbjct: 320 QYVLDLEDCEVTSALSKHLDGNYVQLSYDKYGSHVVQKC---LENREFCSRRIIAELLSD 376
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKL 246
+ L++DPFGNYV+Q + SE+ +LL N + +R N +G + + KL
Sbjct: 377 IDSLLVDPFGNYVIQT-AWIVSEDHMRNVLLYHINRNVSFMRC--NVYGRKLLQKL 429
>gi|116199395|ref|XP_001225509.1| hypothetical protein CHGG_07853 [Chaetomium globosum CBS 148.51]
gi|88179132|gb|EAQ86600.1| hypothetical protein CHGG_07853 [Chaetomium globosum CBS 148.51]
Length = 1010
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 188/302 (62%), Gaps = 7/302 (2%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F+ L + G I +L KDQ+GCR+LQ+ + + ++I MI++E V ELM DPFGNY
Sbjct: 589 FNNLPLEQVGGTIYSLCKDQHGCRYLQKQLENRIPDQIHMIWLETNQHVVELMTDPFGNY 648
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E C++++RT +++ N +V I LN HG RA+ K++E++T QI+L++ A
Sbjct: 649 LCQKLLEYCNDDERT---VLVQNSTSNMVTIALNQHGTRALQKMIEHVTTQVQINLIVEA 705
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ S D ++ + V +C + T + GCCVLQ C+++
Sbjct: 706 LRNQVVELIQDLNGNHVIQKCLNKLSAADASFIFDAVGKHCVEVGTHRHGCCVLQRCIDH 765
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ GAQ+ L+ I +A+ L +D +GNYVVQ+++ L P T L++Q +G S +K
Sbjct: 766 ADGAQKIWLIERITDHAVTLVQDPFGNYVVQYIIDLNEPTFTEPLVKQFQGRIGMLSKHK 825
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL----LVSKVRLF 438
+ SNVVE+CL + EE I+ ELL + LL FGNYVIQ+AL +SK RL
Sbjct: 826 FSSNVVEKCLRCAAEESRDMIVSELLTPGEIDRLLRDSFGNYVIQTALDYATPMSKHRLI 885
Query: 439 SS 440
+
Sbjct: 886 EA 887
>gi|302141949|emb|CBI19152.3| unnamed protein product [Vitis vinifera]
Length = 273
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 123/246 (50%), Positives = 169/246 (68%), Gaps = 1/246 (0%)
Query: 195 MIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQ 254
M++PFGNY++QKL ++C+E+QR +I+L LT + +LVRI LN HG R V KL+ L Q
Sbjct: 1 MMNPFGNYLMQKLFDVCNEDQRMQIVLALTEEPGELVRISLNAHGTRVVQKLVMTLKTRQ 60
Query: 255 QISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCC 314
QISLV+ AL P + LTKD +G++V+Q C+++ S ED K+ + A C IAT + GCC
Sbjct: 61 QISLVVLALEPYFLDLTKDHHGNHVVQRCLEYLSCEDIKFFFYDAAKYCVDIATHRHGCC 120
Query: 315 VLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGH 374
VLQ C+ S G E+LVAEI AN LLLA+D +GNYV+Q+++ L++P ASL+ Q EG+
Sbjct: 121 VLQRCITRSTGKHGEKLVAEISANGLLLAQDDFGNYVIQYIIELKIPSAIASLMSQFEGN 180
Query: 375 YVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
YV S K+ S+VVE+C L+ EE RI+ E L P+ L+ PF NYVIQSAL V+K
Sbjct: 181 YVHLSMQKFSSHVVEKC-LKHLEESRPRIVHEFLSVPHFEQLMQDPFANYVIQSALEVTK 239
Query: 435 VRLFSS 440
L +S
Sbjct: 240 GPLHAS 245
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 94/240 (39%), Gaps = 44/240 (18%)
Query: 158 LAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRT 217
L KD +G +QR + L E+I+ F + ++ G V+Q+ + T
Sbjct: 76 LTKDHHGNHVVQRCLEYLSCEDIKFFFYDAAKYCVDIATHRHGCCVLQRCI--------T 127
Query: 218 RILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGH 277
R HG + V A + + L +D G+
Sbjct: 128 R---------------STGKHGEKLV-----------------AEISANGLLLAQDDFGN 155
Query: 278 YVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA 337
YVIQY ++ L+++ N ++ K V++ C+++ + + R R+V E ++
Sbjct: 156 YVIQYIIELKIPSAIASLMSQFEGNYVHLSMQKFSSHVVEKCLKHLEES-RPRIVHEFLS 214
Query: 338 NALL--LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLES 395
L +D + NYV+Q L + + ASL+ + H + + Y + R L +
Sbjct: 215 VPHFEQLMQDPFANYVIQSALEVTKGPLHASLIEAVRPHII-LRTSPYCKKIFSRTLFKK 273
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 156 VALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQ 215
V +A ++GC LQR ++ + E + E+ L D FGNYV+Q ++EL
Sbjct: 110 VDIATHRHGCCVLQRCITRSTGKHGEKLVAEISANGLLLAQDDFGNYVIQYIIELKIPSA 169
Query: 216 RTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTN 275
++ + L ++H + LK LE + P+ + L+ P L +D
Sbjct: 170 IASLMSQFEGNYVHLSMQKFSSHVVEKCLKHLEE-SRPRIVHEFLSV--PHFEQLMQDPF 226
Query: 276 GHYVIQ 281
+YVIQ
Sbjct: 227 ANYVIQ 232
>gi|83765714|dbj|BAE55857.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 641
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 174/283 (61%), Gaps = 3/283 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L RG + L KDQ+GCR+LQR + + ++MIF E V ELM DPFGNY+ QKL
Sbjct: 233 LEHYRGELYGLCKDQHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYLCQKL 292
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E ++EQRT ++ N QLV+I LN HG RA+ K++E ++ P+Q V+ AL
Sbjct: 293 LEYSNDEQRT---ALINNAAHQLVKIALNQHGTRALQKMIEFISTPEQTQTVIHALEDHV 349
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L +D NG++VIQ C+ S ED +++ + V NC + T + GCCVLQ C++++ G Q
Sbjct: 350 VELVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQ 409
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R RL+A+I +NA L +D +GNYVVQ++L L P T L + G+ + S K+ SNV
Sbjct: 410 RARLIAQITSNAFALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNV 469
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+E+CL + ++I E+L + +L F NYV+Q+A+
Sbjct: 470 IEKCLRTADGPVRGQLIEEMLSGSELEKMLRDSFANYVVQTAM 512
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 1/139 (0%)
Query: 292 TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYV 351
T + L YG+ D+ GC LQ +E + + E + + L D +GNY+
Sbjct: 229 TNFPLEHYRGELYGLCKDQHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYL 288
Query: 352 VQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSP 411
Q LL + +L+ V + N++G+ +++ + + T+ +I L
Sbjct: 289 CQKLLEYSNDEQRTALINNAAHQLVKIALNQHGTRALQKMIEFISTPEQTQTVIHALED- 347
Query: 412 NVSMLLMHPFGNYVIQSAL 430
+V L+ GN+VIQ L
Sbjct: 348 HVVELVQDLNGNHVIQKCL 366
>gi|346323846|gb|EGX93444.1| RNA-binding protein, putative [Cordyceps militaris CM01]
Length = 1060
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 180/290 (62%), Gaps = 3/290 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L R I L KDQ+GCR+LQ+ + E++ MI+ E V ELM DPFGNY+ QKL
Sbjct: 631 LESFRSQIYDLCKDQHGCRYLQKKLEERNPEQVHMIWFETNQHVIELMTDPFGNYLCQKL 690
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E C++++RT +++ N +VRI LN HG RA+ K++E + PQQ+ L++ ALR
Sbjct: 691 LEFCNDDERT---VLIQNASQDMVRIALNQHGTRALQKMIEYVNTPQQVHLIIEALRFRV 747
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L +D NG++VIQ C+ + D +++ + V +NC + T + GCCVLQ C++++ G Q
Sbjct: 748 VELIQDLNGNHVIQKCLNKLTSLDAQFIFDAVGNNCIEVGTHRHGCCVLQRCIDHASGDQ 807
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ LVA I A+A +L +D +GNYVVQ+++ L P T ++ +G S +K+ SNV
Sbjct: 808 KQWLVARITAHARILVQDPFGNYVVQYIIDLNEPTFTEPVVATFQGCIGQLSRHKFSSNV 867
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
+E+CL + I+ E+L +P + LL F NYVIQ+AL + +L
Sbjct: 868 IEKCLRCAQPPSRDMIVEEMLAAPEIERLLRDSFANYVIQTALEFATPQL 917
>gi|118425863|gb|ABK90830.1| pumilio-family RNA binding protein [Hortaea werneckii]
Length = 457
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 118/285 (41%), Positives = 176/285 (61%), Gaps = 3/285 (1%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+ +RDL G I L KDQ+GCR LQR + + IF EV D + ELM DPFGNY+ Q
Sbjct: 16 TDIRDLVGEIYMLCKDQHGCRSLQRKLDERDEPTTHTIFNEVKDHIIELMTDPFGNYLCQ 75
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+ ++EQRT ++ N + +I LN HG RA+ K++E ++ P+Q S+++ ALR
Sbjct: 76 KLLGGTNDEQRT---ALIRNAMPAMTKIALNQHGTRALQKMIEFISTPEQTSMIIDALRY 132
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
V L +D NG++VIQ C+ H S ED +++ + V NC + T + GCCVLQ C++++ G
Sbjct: 133 DVVQLIQDLNGNHVIQNCLNHLSSEDAQFIFDAVGANCVTVGTHRHGCCVLQRCIDHASG 192
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
Q+ RLV ++I NA L +D +GNYVVQ++L L P T L + + + V S K+ S
Sbjct: 193 LQKGRLVDQVIHNAFSLVQDPFGNYVVQYILDLGEPAFTEPLCKSFQKNVVFLSKQKFSS 252
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
NVVE+C+ +G E +I E++ + LL F NYV+Q+A+
Sbjct: 253 NVVEKCIRCAGAETKRMLIAEIVAPTELEKLLRDSFANYVVQTAM 297
>gi|443895829|dbj|GAC73174.1| translational repressor MPT5/PUF4 and related RNA-binding proteins
[Pseudozyma antarctica T-34]
Length = 671
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/285 (42%), Positives = 181/285 (63%), Gaps = 3/285 (1%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+ L +L+G+I AL KDQ+GCR LQ+ + +MIF E ELM DPFGNY+ Q
Sbjct: 225 TQLEELQGDIFALCKDQHGCRFLQKKLEESNGAHRDMIFSETFSHFAELMTDPFGNYLCQ 284
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
K++E C++EQR I+ ++ +LV I LN HG RAV K+++ L+ P+QI ++ AL
Sbjct: 285 KMLEYCTDEQRNLIVELVAP---ELVTISLNMHGTRAVQKMIDFLSTPRQIHSIIVALSM 341
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
VTL KD NG++V+Q C+ ED +++ N VA +C +AT + GCCVLQ C++++
Sbjct: 342 NVVTLIKDLNGNHVVQKCLNRLGAEDNQFIYNAVAAHCVEVATHRHGCCVLQRCIDHASE 401
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
+QR +LVAEI NAL L +D +GNYVVQ++L L + + T +++RQ G+ S K+ S
Sbjct: 402 SQRVQLVAEITYNALTLVQDPFGNYVVQYVLDLSIARFTDAVVRQFVGNVCLLSVQKFSS 461
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
NV+E+C+ S ++I ELL + LL + NYV+Q++L
Sbjct: 462 NVMEKCIRVSEPGVRKQLIEELLNRARLEKLLRDSYANYVVQTSL 506
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 7/222 (3%)
Query: 217 TRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
T L L D F L C + HG R + K LE +N ++ + L D G
Sbjct: 224 TTQLEELQGDIFAL---CKDQHGCRFLQKKLEE-SNGAHRDMIFSETFSHFAELMTDPFG 279
Query: 277 HYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGAQRERLVAEI 335
+Y+ Q +++ + E ++ VA I+ + G +Q +++ S Q ++ +
Sbjct: 280 NYLCQKMLEYCTDEQRNLIVELVAPELVTISLNMHGTRAVQKMIDFLSTPRQIHSIIVAL 339
Query: 336 IANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLES 395
N + L +D GN+VVQ L + + + H V + +++G V++RC+ +
Sbjct: 340 SMNVVTLIKDLNGNHVVQKCLNRLGAEDNQFIYNAVAAHCVEVATHRHGCCVLQRCIDHA 399
Query: 396 GEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
E Q +++ E+ + N L+ PFGNYV+Q L +S R
Sbjct: 400 SESQRVQLVAEI--TYNALTLVQDPFGNYVVQYVLDLSIARF 439
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 8/150 (5%)
Query: 287 FSHEDTKYL-----LNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALL 341
+ED+ +L L E+ + + + D+ GC LQ +E S GA R+ + +E ++
Sbjct: 213 LDNEDSAFLDATTQLEELQGDIFALCKDQHGCRFLQKKLEESNGAHRDMIFSETFSHFAE 272
Query: 342 LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCL-LESGEEQS 400
L D +GNY+ Q +L + ++ + V+ S N +G+ V++ + S Q
Sbjct: 273 LMTDPFGNYLCQKMLEYCTDEQRNLIVELVAPELVTISLNMHGTRAVQKMIDFLSTPRQI 332
Query: 401 TRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
II+ L S NV L+ GN+V+Q L
Sbjct: 333 HSIIVAL--SMNVVTLIKDLNGNHVVQKCL 360
>gi|390603815|gb|EIN13206.1| ARM repeat-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 1019
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 133/322 (41%), Positives = 190/322 (59%), Gaps = 7/322 (2%)
Query: 111 GLRSNGNELSSVPRNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQR 170
GL NG S + +S KR + + F + L DL+G I L KDQ+GCR+LQ+
Sbjct: 527 GLGMNGRIPSGDSKMNGISGPKHKRGEMELNRFAGTRLEDLQGEIPGLCKDQHGCRYLQK 586
Query: 171 TMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQL 230
+ E +MIF E +LM DPFGNY+ QKL+E ++EQR I + D L
Sbjct: 587 KLEEGIPEHRDMIFRETFGHFADLMTDPFGNYLCQKLLEYATDEQRNLICESVAQD---L 643
Query: 231 VRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHE 290
V I LN HG RAV K+++ L+ +QI ++ AL V L KD NG++VIQ C+ + E
Sbjct: 644 VNISLNMHGTRAVQKMIDFLSTRRQIHSIIVALSLHVVVLIKDLNGNHVIQKCLNKLAPE 703
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
D +++ N VA NC +AT + GCCVLQ C++++ QR +LV EI NAL L +D YGNY
Sbjct: 704 DNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASDQQRVQLVNEITYNALTLVQDPYGNY 763
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTR--IIIELL 408
VVQ++L L + + ++RQ G+ + S K+ SNV+E+C+ + E STR +I ELL
Sbjct: 764 VVQYILDLNDNRFSDGVIRQFTGNVCALSVQKFSSNVIEKCIRVA--EHSTRKLLIEELL 821
Query: 409 RSPNVSMLLMHPFGNYVIQSAL 430
+ LL +GNY +Q+AL
Sbjct: 822 NRTRLEKLLRDSYGNYCVQTAL 843
>gi|261194503|ref|XP_002623656.1| RNA-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239588194|gb|EEQ70837.1| RNA-binding protein [Ajellomyces dermatitidis SLH14081]
Length = 1119
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 174/288 (60%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F + L +G + + KDQYGCR+LQ+ + ++MIF+E V ELM DPFGNY
Sbjct: 680 FGNAPLETYQGELYGMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNY 739
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQRT ++ N QLV+I LN HG RA+ K++E ++ P+Q V+ A
Sbjct: 740 LCQKLLEYSNDEQRT---ALINNAAPQLVKIALNQHGTRALQKMIEFISTPEQTQTVINA 796
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ S D +++ + V +C + T + GCCVLQ C+++
Sbjct: 797 LRDRVVELVQDLNGNHVIQKCLNRLSAPDAQFIYDAVGTSCVAVGTHRHGCCVLQRCIDH 856
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G QR RL+ +I NA L +D +GNYVVQ++L L P + R G+ + S K
Sbjct: 857 ASGEQRARLIEQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQK 916
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+C+ + + + ++ E+L + +L F NYV+Q+A+
Sbjct: 917 FSSNVIEKCIRTADPQSRSSLVEEMLVPSELEKMLRDSFANYVVQTAM 964
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSL-PKEEIEMIFVEVIDRVCELMI-DPFGNYVVQK 206
R RGNI AL+K ++ +++ + + P+ ++ ++ E M+ D F NYVVQ
Sbjct: 903 RSFRGNIPALSKQKFSSNVIEKCIRTADPQSRSSLVEEMLVPSELEKMLRDSFANYVVQT 962
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
++ E RT+++ + L I HG R K+L ++ N ++S G
Sbjct: 963 AMDFADPEYRTKLIEAIRPI---LPAIRQTPHGRRIAGKIL-SVENQGRVS----GGSSG 1014
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADN 302
+T TN ++ I + + N V DN
Sbjct: 1015 QITPNDMTNVYHQIHPFPNSIITQYPQQQFNNVGDN 1050
>gi|156059478|ref|XP_001595662.1| hypothetical protein SS1G_03751 [Sclerotinia sclerotiorum 1980]
gi|154701538|gb|EDO01277.1| hypothetical protein SS1G_03751 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1085
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/284 (41%), Positives = 175/284 (61%), Gaps = 3/284 (1%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
+L L G I AL KDQ+GCR+LQ+ + E++ MI++E V ELM DPFGNY+ QK
Sbjct: 660 ALEQLGGEIYALCKDQHGCRYLQKKLEDRNPEQVHMIWLETNQHVIELMTDPFGNYLCQK 719
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L+E C++E+RT +++ N LVRI LN HG RA+ K++E ++ P Q+ ++ ALR
Sbjct: 720 LLEYCNDEERT---VLIENASHDLVRIALNQHGTRALQKMIEFISTPGQVQTIIGALRFR 776
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
V L +D NG++VIQ C+ S D +++ + V +C + T + GCCVLQ C++++ G
Sbjct: 777 VVELIQDLNGNHVIQKCLNKLSPTDAQFIFDAVGQHCVDVGTHRHGCCVLQRCIDHASGD 836
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q+ L+ +I NA +L +D +GNYVVQ++L L P T L+ G S K+ SN
Sbjct: 837 QKAWLIRQISNNAYVLVQDPFGNYVVQYILDLNEPIFTEPLVAMFGGRVAQLSKQKFSSN 896
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
V+E+CL + E +I E+L+ + LL F NYVIQ+AL
Sbjct: 897 VIEKCLRCAQEPSKDMLIEEMLQPNQLDSLLRDSFANYVIQTAL 940
>gi|400597533|gb|EJP65263.1| pumilio domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 1043
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/390 (34%), Positives = 210/390 (53%), Gaps = 33/390 (8%)
Query: 50 FDETDLSAYFSHLNVNDRIFDN--PVHHFPLVENGFFSHPCQEAEPINQDSSILNLLHNH 107
F L+A LN+N N PV +FP G+ P Q Q S ++ N
Sbjct: 545 FGGPMLAAGIQQLNLNGVSPGNMYPVQNFP----GYNGVPFQHGSGAPQRDSQARVIQN- 599
Query: 108 NFDGLRSNGNELSSVPRNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRH 167
R Q + ++ R Q + L R I L KDQ+GCR+
Sbjct: 600 ----------------RRQQLDPDAMSRYQNM-------PLESFRSQIYDLCKDQHGCRY 636
Query: 168 LQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDD 227
LQ+ + E++ MI++E V ELM DPFGNY+ QKL+E C++++RT +++ N
Sbjct: 637 LQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDDERT---VLIQNAS 693
Query: 228 FQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
+VRI LN HG RA+ K++E + PQQ+ L++ ALR V L +D NG++VIQ C+
Sbjct: 694 QDMVRIALNQHGTRALQKMIEYVNTPQQVHLIIEALRFRVVELIQDLNGNHVIQKCLNKL 753
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
+ D +++ + V +NC + T + GCCVLQ C++++ G Q++ LVA I A+A +L +D +
Sbjct: 754 TSLDAQFIFDAVGNNCIEVGTHRHGCCVLQRCIDHASGDQKQWLVARITAHARILVQDPF 813
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYVVQ+++ L P T ++ +G S +K+ SNV+E+CL + I+ E+
Sbjct: 814 GNYVVQYIIDLNEPTFTEPVVATFQGCIGQLSRHKFSSNVIEKCLRCAQPPSKDMIVEEM 873
Query: 408 LRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
L + LL F NYVIQ+AL + +L
Sbjct: 874 LVPAEIERLLRDSFANYVIQTALEFATPQL 903
>gi|330805438|ref|XP_003290689.1| hypothetical protein DICPUDRAFT_155226 [Dictyostelium purpureum]
gi|325079152|gb|EGC32766.1| hypothetical protein DICPUDRAFT_155226 [Dictyostelium purpureum]
Length = 926
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/291 (40%), Positives = 186/291 (63%), Gaps = 5/291 (1%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+S+ L G+I L +DQ+GCR LQ+ + + E+IF EV D + ELM DPFGNY+ Q
Sbjct: 597 TSVEQLVGSIYPLCRDQHGCRFLQKKLEESDPQLTEIIFKEVCDYMLELMTDPFGNYLCQ 656
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E C+++QR I+ + D +VRI +N HG RAV K++E LT P+QI L+ +L+
Sbjct: 657 KLLEHCNDQQRLTIIEKVGTD---IVRISMNMHGTRAVQKMIEYLTTPEQIELIKRSLKD 713
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVAD--NCYGIATDKSGCCVLQHCVEYS 323
V L +D NG++VIQ C+ S +D +++ + V+ NC +AT + GCCVLQ C++++
Sbjct: 714 SVVQLIQDLNGNHVIQKCLNKLSPQDNQFIYDSVSSDGNCVAVATHRHGCCVLQRCIDHA 773
Query: 324 KGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+Q+ +L+ E+IAN+L+L +D YGNYVVQ++L L + + ++ GH + K+
Sbjct: 774 SESQKLQLIQEVIANSLVLVQDPYGNYVVQYVLDLPFQGLATEMAKRFVGHVPILATQKF 833
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
SNVVE+CL + +I E++ N+ LL P+ NYVIQ++L +S+
Sbjct: 834 SSNVVEKCLHVADATTRGNLIQEVIDYDNLLYLLQDPYANYVIQTSLSISE 884
>gi|239613522|gb|EEQ90509.1| RNA-binding protein [Ajellomyces dermatitidis ER-3]
Length = 1122
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 174/288 (60%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F + L +G + + KDQYGCR+LQ+ + ++MIF+E V ELM DPFGNY
Sbjct: 683 FGNAPLETYQGELYGMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNY 742
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQRT ++ N QLV+I LN HG RA+ K++E ++ P+Q V+ A
Sbjct: 743 LCQKLLEYSNDEQRT---ALINNAAPQLVKIALNQHGTRALQKMIEFISTPEQTQTVINA 799
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ S D +++ + V +C + T + GCCVLQ C+++
Sbjct: 800 LRDRVVELVQDLNGNHVIQKCLNRLSAPDAQFIYDAVGTSCVAVGTHRHGCCVLQRCIDH 859
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G QR RL+ +I NA L +D +GNYVVQ++L L P + R G+ + S K
Sbjct: 860 ASGEQRARLIEQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQK 919
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+C+ + + + ++ E+L + +L F NYV+Q+A+
Sbjct: 920 FSSNVIEKCIRTADPQSRSALVEEMLVPSELEKMLRDSFANYVVQTAM 967
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI--DRVCELMIDPFGNYVVQK 206
R RGNI AL+K ++ +++ + + + + E++ + +++ D F NYVVQ
Sbjct: 906 RSFRGNIPALSKQKFSSNVIEKCIRTADPQSRSALVEEMLVPSELEKMLRDSFANYVVQT 965
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
++ E RT+++ + L I HG R K+L ++ N ++S G
Sbjct: 966 AMDFADPEYRTKLIEAIRPI---LPAIRQTPHGRRIAGKIL-SVENQGRVS----GGSSG 1017
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADN 302
+T TN ++ I + + N V DN
Sbjct: 1018 QITPNDMTNVYHQIHPFPNSIITQYPQQQFNNVGDN 1053
>gi|328768244|gb|EGF78291.1| hypothetical protein BATDEDRAFT_37298 [Batrachochytrium
dendrobatidis JAM81]
Length = 636
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/297 (41%), Positives = 184/297 (61%), Gaps = 3/297 (1%)
Query: 134 KRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE 193
K +Q F L DL G I L+KDQ+GCR+LQR + ++ ++MI+VE+ E
Sbjct: 237 KHSQEEASRFSSIMLEDLVGQISVLSKDQHGCRYLQRKLEEQNEKHLDMIYVEIFPNFAE 296
Query: 194 LMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNP 253
LM DPFGNY+ QKL+E C+EEQR ++ + D L + LN HG RAV KL+E L+
Sbjct: 297 LMTDPFGNYLCQKLLEYCTEEQRNMLVEHVAPD---LAAVSLNMHGTRAVQKLIEFLSTH 353
Query: 254 QQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGC 313
QIS V+ AL V+L KD NG++VIQ C+ SHE+ +++ N V +C IAT + GC
Sbjct: 354 HQISTVVRALALNVVSLIKDLNGNHVIQKCLNRLSHENNQFIYNAVRKHCTEIATHRHGC 413
Query: 314 CVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEG 373
CVLQ C++++ +QR +LVAEI +AL L +D +GNYVVQ++L L + + +++ + G
Sbjct: 414 CVLQRCIDHASDSQRVQLVAEITYHALTLVQDPFGNYVVQYVLDLAEIKFSEAIVHRFLG 473
Query: 374 HYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ S K+ SNV+E+C+ + E +I ELL + LL + NYV+Q++L
Sbjct: 474 NICLLSVQKFSSNVIEKCIRVASSETRALLIDELLNKERLDKLLRDSYANYVVQTSL 530
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 112/228 (49%), Gaps = 5/228 (2%)
Query: 212 SEEQRTRIL-LMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
S+E+ +R +ML + Q+ + + HG R + + LE N + + ++ + P L
Sbjct: 239 SQEEASRFSSIMLEDLVGQISVLSKDQHGCRYLQRKLEE-QNEKHLDMIYVEIFPNFAEL 297
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGAQRE 329
D G+Y+ Q +++ + E L+ VA + ++ + G +Q +E+ S Q
Sbjct: 298 MTDPFGNYLCQKLLEYCTEEQRNMLVEHVAPDLAAVSLNMHGTRAVQKLIEFLSTHHQIS 357
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVE 389
+V + N + L +D GN+V+Q L + + + H + +++G V++
Sbjct: 358 TVVRALALNVVSLIKDLNGNHVIQKCLNRLSHENNQFIYNAVRKHCTEIATHRHGCCVLQ 417
Query: 390 RCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
RC+ + + Q +++ E+ + + L+ PFGNYV+Q L +++++
Sbjct: 418 RCIDHASDSQRVQLVAEI--TYHALTLVQDPFGNYVVQYVLDLAEIKF 463
>gi|327357037|gb|EGE85894.1| RNA-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 1043
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 174/288 (60%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F + L +G + + KDQYGCR+LQ+ + ++MIF+E V ELM DPFGNY
Sbjct: 604 FGNAPLETYQGELYGMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNY 663
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQRT ++ N QLV+I LN HG RA+ K++E ++ P+Q V+ A
Sbjct: 664 LCQKLLEYSNDEQRT---ALINNAAPQLVKIALNQHGTRALQKMIEFISTPEQTQTVINA 720
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ S D +++ + V +C + T + GCCVLQ C+++
Sbjct: 721 LRDRVVELVQDLNGNHVIQKCLNRLSAPDAQFIYDAVGTSCVAVGTHRHGCCVLQRCIDH 780
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G QR RL+ +I NA L +D +GNYVVQ++L L P + R G+ + S K
Sbjct: 781 ASGEQRARLIEQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQK 840
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+C+ + + + ++ E+L + +L F NYV+Q+A+
Sbjct: 841 FSSNVIEKCIRTADPQSRSALVEEMLVPSELEKMLRDSFANYVVQTAM 888
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSL-PKEEIEMIFVEVIDRVCELMI-DPFGNYVVQK 206
R RGNI AL+K ++ +++ + + P+ ++ ++ E M+ D F NYVVQ
Sbjct: 827 RSFRGNIPALSKQKFSSNVIEKCIRTADPQSRSALVEEMLVPSELEKMLRDSFANYVVQT 886
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
++ E RT+++ + L I HG R K+L ++ N ++S + G
Sbjct: 887 AMDFADPEYRTKLIEAIRPI---LPAIRQTPHGRRIAGKIL-SVENQGRVSGGSS----G 938
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADN 302
+T TN ++ I + + N V DN
Sbjct: 939 QITPNDMTNVYHQIHPFPNSIITQYPQQQFNNVGDN 974
>gi|322710722|gb|EFZ02296.1| RNA-binding protein, putative [Metarhizium anisopliae ARSEF 23]
Length = 1023
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/332 (37%), Positives = 193/332 (58%), Gaps = 6/332 (1%)
Query: 102 NLLHNHNFDGLRS-NGNELSSVPRNQWMSSLSLKR--NQWLQDSFDCSSLRDLRGNIVAL 158
NL N+ G S + N+ + PR+ + +R + + L RG I L
Sbjct: 535 NLYPAQNYTGYGSLSYNQGAGQPRDSQARVIQHRRQLDNEAMSRYQNMPLESFRGQIYEL 594
Query: 159 AKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTR 218
KDQ+GCR+LQ+ + E++ MI++E V ELM DPFGNY+ QKL+E C++++RT
Sbjct: 595 CKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDDERT- 653
Query: 219 ILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHY 278
+++ N +VRI LN HG RA+ K++E ++ PQQ+ L++ ALR V L +D NG++
Sbjct: 654 --VLIQNASQDMVRIALNQHGTRALQKMIEYVSTPQQVHLIIEALRFRVVELIQDLNGNH 711
Query: 279 VIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIAN 338
VIQ C+ + D +++ + V +NC + T + GCCVLQ C++++ G Q+ LV I +
Sbjct: 712 VIQKCLNKLTSLDAQFIFDAVGNNCVEVGTHRHGCCVLQRCIDHASGEQKPWLVGRITEH 771
Query: 339 ALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEE 398
A +L +D +GNYVVQ+++ L P T ++ +G S +K+ SNV+E+CL S
Sbjct: 772 ARILVQDPFGNYVVQYIIDLNEPSFTEPMVAMFQGCISQLSRHKFSSNVIEKCLRCSQAP 831
Query: 399 QSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
I+ ELL + LL F NYVIQ+AL
Sbjct: 832 SKDMIVEELLAPQEMERLLRDSFANYVIQTAL 863
>gi|406863177|gb|EKD16225.1| RNA-binding protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1055
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 116/283 (40%), Positives = 175/283 (61%), Gaps = 3/283 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L L G I AL KDQ+GCR+LQ+ + +++ MI++E V ELM DPFGNY+ QKL
Sbjct: 626 LESLGGEIYALCKDQHGCRYLQKKLEDRNPDQVHMIWLETNQHVIELMTDPFGNYLCQKL 685
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E C++++RT +++ N LVRI LN HG RA+ K++E ++ P QI ++ ALR
Sbjct: 686 LEFCNDDERT---VLIENASHDLVRIALNQHGTRALQKMIEFISTPGQIQTIIEALRHRV 742
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L +D NG++VIQ C+ S D +++ + V +C + T + GCCVLQ C++++ G Q
Sbjct: 743 VELIQDLNGNHVIQKCLNKLSSTDAQFIFDAVGTHCVDVGTHRHGCCVLQRCIDHASGEQ 802
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ L+ +I NA +L +D +GNYVVQ++L L P T L+ +G S K+ SNV
Sbjct: 803 KAWLIRQISNNAYVLVQDPFGNYVVQYILDLNEPTFTEPLVAMFQGRVGQLSKQKFSSNV 862
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+E+CL + E +I E+L+ + LL F NYVIQ+AL
Sbjct: 863 IEKCLRCAQEPSKDMLIEEMLQPAELDRLLRDSFANYVIQTAL 905
>gi|367035312|ref|XP_003666938.1| hypothetical protein MYCTH_2312108 [Myceliophthora thermophila ATCC
42464]
gi|347014211|gb|AEO61693.1| hypothetical protein MYCTH_2312108 [Myceliophthora thermophila ATCC
42464]
Length = 827
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 130/329 (39%), Positives = 196/329 (59%), Gaps = 12/329 (3%)
Query: 121 SVPRNQWMSSLSLKRNQWLQDS-----FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSL 175
S PR S + +++ DS F+ L + G I +L KDQ+GCR+LQ+ + +
Sbjct: 339 SAPRPHQDSQARVIQSRRQMDSEAMARFNNLPLEQVGGTIYSLCKDQHGCRYLQKQLENR 398
Query: 176 PKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICL 235
E+I MI++E V ELM DPFGNY+ QKL+E CS+++RT +++ N +V I L
Sbjct: 399 IPEQIHMIWLETNQHVVELMTDPFGNYLCQKLLEYCSDDERT---VLIQNAAPSMVSIAL 455
Query: 236 NTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYL 295
N HG RA+ K++E++T QI+L++ ALR V L +D NG++VIQ C+ S D ++
Sbjct: 456 NQHGTRALQKMIEHVTTQVQINLIVEALRNQVVELIQDLNGNHVIQKCLNKLSAADASFI 515
Query: 296 LNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHL 355
+ V +C + T + GCCVLQ C++++ G Q+ LV I +A+ L +D +GNYVVQ++
Sbjct: 516 FDAVGKHCVEVGTHRHGCCVLQRCIDHADGNQKVWLVECITEHAVTLVQDPFGNYVVQYI 575
Query: 356 LALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSM 415
+ L T L++Q EG S +K+ SNVVE+CL + +E I+ ELL +
Sbjct: 576 IDLNEATFTEPLVKQFEGRIAQLSKHKFSSNVVEKCLRCASDESRDMIVSELLAPGEIER 635
Query: 416 LLMHPFGNYVIQSAL----LVSKVRLFSS 440
LL FGNYVIQ+AL +SK RL +
Sbjct: 636 LLRDSFGNYVIQTALDYSTPISKHRLIEA 664
>gi|325094905|gb|EGC48215.1| pumilio family RNA binding protein [Ajellomyces capsulatus H88]
Length = 651
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 175/288 (60%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F + L +G + + KDQYGCR+LQ+ + ++MIF+E V ELM DPFGNY
Sbjct: 233 FGNAPLETYQGELYGMCKDQYGCRYLQKKLEEQSPAHVQMIFLETHIHVVELMTDPFGNY 292
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQRT ++ N QLV+I LN HG RA+ K++E ++ P+Q V+ A
Sbjct: 293 LCQKLLEFSNDEQRT---ALINNAAPQLVKIALNQHGTRALQKMIEFISTPEQTQTVINA 349
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ S D +++ + V ++C + T + GCCVLQ C+++
Sbjct: 350 LRDRVVELVQDLNGNHVIQKCLNRLSATDAQFIYDAVGESCVPVGTHRHGCCVLQRCIDH 409
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G QR RL+ +I NA L +D +GNYVVQ++L L P + R G+ + S K
Sbjct: 410 ASGDQRARLIEQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQK 469
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+C+ + + + ++ E+L + +L F NYV+Q+A+
Sbjct: 470 FSSNVIEKCIRTADPQSRSALVDEMLVPSELEKMLRDSFANYVVQTAM 517
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTM-SSLPKEEIEMIFVEVIDRVCELMI-DPFGNYVVQK 206
R RGNI AL+K ++ +++ + ++ P+ ++ ++ E M+ D F NYVVQ
Sbjct: 456 RSFRGNIPALSKQKFSSNVIEKCIRTADPQSRSALVDEMLVPSELEKMLRDSFANYVVQT 515
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
++ E RT+++ + L I HG R K+L
Sbjct: 516 AMDFADPEYRTKLVEAIRPI---LPAIRQTPHGRRIAGKIL 553
>gi|322696542|gb|EFY88333.1| RNA-binding protein, putative [Metarhizium acridum CQMa 102]
Length = 1012
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/283 (40%), Positives = 175/283 (61%), Gaps = 3/283 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L RG I L KDQ+GCR+LQ+ + E++ MI++E V ELM DPFGNY+ QKL
Sbjct: 574 LESFRGQIYELCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKL 633
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E C++++RT +++ N +VRI LN HG RA+ K++E ++ PQQ+ L++ ALR
Sbjct: 634 LEFCNDDERT---VLIQNASQDMVRIALNQHGTRALQKMIEYVSTPQQVHLIIEALRFRV 690
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L +D NG++VIQ C+ + D +++ + V +NC + T + GCCVLQ C++++ G Q
Sbjct: 691 VELIQDLNGNHVIQKCLNKLTSLDAQFIFDAVGNNCVEVGTHRHGCCVLQRCIDHASGEQ 750
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ LV I +A +L +D +GNYVVQ+++ L P T ++ +G S +K+ SNV
Sbjct: 751 KPWLVGRITEHARILVQDPFGNYVVQYIIDLNEPSFTEPMVAMFQGCISQLSRHKFSSNV 810
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+E+CL S I+ ELL + LL F NYVIQ+AL
Sbjct: 811 IEKCLRCSQAPSKDMIVEELLAPQEMERLLRDSFANYVIQTAL 853
>gi|358366888|dbj|GAA83508.1| RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 1002
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/283 (40%), Positives = 174/283 (61%), Gaps = 3/283 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +G + L KDQ+GCR+LQR + E ++MIF E V ELM DPFGNY+ QKL
Sbjct: 589 LEHYKGELYGLCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKL 648
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E ++EQRT ++ N QLV+I LN HG RA+ K++E ++ +Q V+ +L
Sbjct: 649 LEYSNDEQRTD---LINNAAHQLVKIALNQHGTRALQKMIEFISTAEQTQTVIHSLEDHV 705
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L +D NG++VIQ C+ S ED +++ + V NC + T + GCCVLQ C++++ G Q
Sbjct: 706 VELVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGDQ 765
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ RL+A+I ANA L +D +GNYVVQ++L L P T L + G+ + S K+ SNV
Sbjct: 766 KARLIAQITANAFALVQDPFGNYVVQYILDLAEPHFTEPLCQNFRGNIPALSKQKFSSNV 825
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+E+CL + + ++I E+L + +L F NYV+Q+A+
Sbjct: 826 IEKCLRTADFQIRRQMIDEMLAGAELEKMLRDSFANYVVQTAM 868
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 1/139 (0%)
Query: 292 TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYV 351
T + L YG+ D+ GC LQ +E + + E + + L D +GNY+
Sbjct: 585 TNFPLEHYKGELYGLCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYL 644
Query: 352 VQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSP 411
Q LL + L+ V + N++G+ +++ + + T+ +I L
Sbjct: 645 CQKLLEYSNDEQRTDLINNAAHQLVKIALNQHGTRALQKMIEFISTAEQTQTVIHSLED- 703
Query: 412 NVSMLLMHPFGNYVIQSAL 430
+V L+ GN+VIQ L
Sbjct: 704 HVVELVQDLNGNHVIQKCL 722
>gi|317025399|ref|XP_001388993.2| RNA-binding protein [Aspergillus niger CBS 513.88]
Length = 1000
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/283 (40%), Positives = 174/283 (61%), Gaps = 3/283 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +G + L KDQ+GCR+LQR + E ++MIF E V ELM DPFGNY+ QKL
Sbjct: 587 LEHYKGELYGLCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKL 646
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E ++EQRT ++ N QLV+I LN HG RA+ K++E ++ +Q V+ +L
Sbjct: 647 LEYSNDEQRTD---LINNAAHQLVKIALNQHGTRALQKMIEFISTAEQTQTVIHSLEDHV 703
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L +D NG++VIQ C+ S ED +++ + V NC + T + GCCVLQ C++++ G Q
Sbjct: 704 VELVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGDQ 763
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ RL+A+I ANA L +D +GNYVVQ++L L P T L + G+ + S K+ SNV
Sbjct: 764 KARLIAQITANAFALVQDPFGNYVVQYILDLAEPHFTEPLCQNFRGNIPALSKQKFSSNV 823
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+E+CL + + ++I E+L + +L F NYV+Q+A+
Sbjct: 824 IEKCLRTADFQIRRQMIDEMLAGAELEKMLRDSFANYVVQTAM 866
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 1/139 (0%)
Query: 292 TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYV 351
T + L YG+ D+ GC LQ +E + + E + + L D +GNY+
Sbjct: 583 TNFPLEHYKGELYGLCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYL 642
Query: 352 VQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSP 411
Q LL + L+ V + N++G+ +++ + + T+ +I L
Sbjct: 643 CQKLLEYSNDEQRTDLINNAAHQLVKIALNQHGTRALQKMIEFISTAEQTQTVIHSLED- 701
Query: 412 NVSMLLMHPFGNYVIQSAL 430
+V L+ GN+VIQ L
Sbjct: 702 HVVELVQDLNGNHVIQKCL 720
>gi|154277036|ref|XP_001539363.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414436|gb|EDN09801.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1175
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 174/288 (60%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F + L +G + + KDQYGCR+LQ+ + ++MIF+E V ELM DPFGNY
Sbjct: 735 FGNAPLETYQGELYGMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNY 794
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQRT ++ N QLV+I LN HG RA+ K++E ++ P+Q V+ A
Sbjct: 795 LCQKLLEFSNDEQRT---ALINNAAPQLVKIALNQHGTRALQKMIEFISTPEQTQTVINA 851
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ S D +++ + V +C + T + GCCVLQ C+++
Sbjct: 852 LRDRVVELVQDLNGNHVIQKCLNRLSATDAQFIYDAVGASCVPVGTHRHGCCVLQRCIDH 911
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G QR RL+ +I NA L +D +GNYVVQ++L L P + R G+ + S K
Sbjct: 912 ASGDQRARLIEQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNISALSKQK 971
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+C+ + + + ++ E+L + +L F NYV+Q+A+
Sbjct: 972 FSSNVIEKCIRTADPQSRSALVDEMLVPSELEKMLRDSFANYVVQTAM 1019
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTM-SSLPKEEIEMIFVEVIDRVCELMI-DPFGNYVVQK 206
R RGNI AL+K ++ +++ + ++ P+ ++ ++ E M+ D F NYVVQ
Sbjct: 958 RSFRGNISALSKQKFSSNVIEKCIRTADPQSRSALVDEMLVPSELEKMLRDSFANYVVQT 1017
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
++ E RT+++ + L I HG R K+L
Sbjct: 1018 AMDFADPEYRTKLVEAIRPI---LPAIRQTPHGRRIAGKIL 1055
>gi|320040960|gb|EFW22893.1| RNA-binding protein [Coccidioides posadasii str. Silveira]
Length = 1023
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 118/284 (41%), Positives = 177/284 (62%), Gaps = 5/284 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L RG + L KDQ+GCR+LQR + E ++MIF+E V ELM DPFGNY+ QKL
Sbjct: 599 LEQYRGELYGLCKDQHGCRYLQRKLEERIPENVQMIFLETHVHVVELMTDPFGNYLCQKL 658
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E ++EQRT ++ N QLV I LN HG RA+ K++E ++ P+Q V+ ALR
Sbjct: 659 LEFSNDEQRT---ALINNAAPQLVSIALNQHGTRALQKMIEFISTPEQTQTVIKALRDKV 715
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L +D NG++VIQ C+ S D +++ + V +C + T + GCCVLQ C++++ G Q
Sbjct: 716 VDLVQDLNGNHVIQKCLNRLSAADAQFIYDAVGASCIAVGTHRHGCCVLQRCIDHASGDQ 775
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R +L+A+I A++ L +D +GNYVVQ++L L P+ T L + G S K+ SNV
Sbjct: 776 RAQLIAQITASSYTLVQDPFGNYVVQYILDLAEPRFTEPLCQTFIGKVSMLSKQKFSSNV 835
Query: 388 VERCLLESGEEQSTRIII-ELLRSPNVSMLLMHPFGNYVIQSAL 430
+E+C L + + QS R++I E+L + +L F NYV+Q+A+
Sbjct: 836 IEKC-LRTADFQSRRLLIQEMLPVNELERMLRDSFANYVVQTAM 878
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 106/215 (49%), Gaps = 7/215 (3%)
Query: 229 QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFS 288
+L +C + HG R + + LE P+ + ++ V L D G+Y+ Q ++ +
Sbjct: 605 ELYGLCKDQHGCRYLQRKLEERI-PENVQMIFLETHVHVVELMTDPFGNYLCQKLLEFSN 663
Query: 289 HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALL-LAEDCY 347
E L+N A IA ++ G LQ +E+ ++ + V + + + ++ L +D
Sbjct: 664 DEQRTALINNAAPQLVSIALNQHGTRALQKMIEFISTPEQTQTVIKALRDKVVDLVQDLN 723
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHY-VSFSCNKYGSNVVERCLLESGEEQSTRIIIE 406
GN+V+Q L R+ A + G ++ +++G V++RC+ + +Q ++I +
Sbjct: 724 GNHVIQKCLN-RLSAADAQFIYDAVGASCIAVGTHRHGCCVLQRCIDHASGDQRAQLIAQ 782
Query: 407 LLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSSP 441
+ S L+ PFGNYV+Q L +++ R F+ P
Sbjct: 783 ITAS--SYTLVQDPFGNYVVQYILDLAEPR-FTEP 814
>gi|392865282|gb|EAS31064.2| RNA-binding protein [Coccidioides immitis RS]
Length = 1023
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 118/284 (41%), Positives = 177/284 (62%), Gaps = 5/284 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L RG + L KDQ+GCR+LQR + E ++MIF+E V ELM DPFGNY+ QKL
Sbjct: 599 LEQYRGELYGLCKDQHGCRYLQRKLEERIPENVQMIFLETHVHVVELMTDPFGNYLCQKL 658
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E ++EQRT ++ N QLV I LN HG RA+ K++E ++ P+Q V+ ALR
Sbjct: 659 LEFSNDEQRT---ALINNAAPQLVSIALNQHGTRALQKMIEFISTPEQTQTVIKALRDKV 715
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L +D NG++VIQ C+ S D +++ + V +C + T + GCCVLQ C++++ G Q
Sbjct: 716 VDLVQDLNGNHVIQKCLNRLSAADAQFIYDAVGASCIAVGTHRHGCCVLQRCIDHASGDQ 775
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R +L+A+I A++ L +D +GNYVVQ++L L P+ T L + G S K+ SNV
Sbjct: 776 RAQLIAQITASSYTLVQDPFGNYVVQYILDLAEPRFTEPLCQTFIGKVSMLSKQKFSSNV 835
Query: 388 VERCLLESGEEQSTRIII-ELLRSPNVSMLLMHPFGNYVIQSAL 430
+E+C L + + QS R++I E+L + +L F NYV+Q+A+
Sbjct: 836 IEKC-LRTADFQSRRLLIQEMLPVNELERMLRDSFANYVVQTAM 878
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 7/215 (3%)
Query: 229 QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFS 288
+L +C + HG R + + LE P+ + ++ V L D G+Y+ Q ++ +
Sbjct: 605 ELYGLCKDQHGCRYLQRKLEERI-PENVQMIFLETHVHVVELMTDPFGNYLCQKLLEFSN 663
Query: 289 HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGAQRERLVAEIIANALLLAEDCY 347
E L+N A IA ++ G LQ +E+ S Q + ++ + + L +D
Sbjct: 664 DEQRTALINNAAPQLVSIALNQHGTRALQKMIEFISTPEQTQTVIKALRDKVVDLVQDLN 723
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHY-VSFSCNKYGSNVVERCLLESGEEQSTRIIIE 406
GN+V+Q L R+ A + G ++ +++G V++RC+ + +Q ++I +
Sbjct: 724 GNHVIQKCLN-RLSAADAQFIYDAVGASCIAVGTHRHGCCVLQRCIDHASGDQRAQLIAQ 782
Query: 407 LLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSSP 441
+ S L+ PFGNYV+Q L +++ R F+ P
Sbjct: 783 ITAS--SYTLVQDPFGNYVVQYILDLAEPR-FTEP 814
>gi|310798475|gb|EFQ33368.1| hypothetical protein GLRG_08647 [Glomerella graminicola M1.001]
Length = 802
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 181/288 (62%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
++ +L ++ G I L KDQ+GCR+LQ+ + E++ MI++E V ELM DPFGNY
Sbjct: 372 YNGLALENVGGQIYDLCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNY 431
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E C++++RT +++ N +VRI LN HG RA+ K++E +T P QI +++ A
Sbjct: 432 LCQKLLEFCNDDERT---VLIQNAAADMVRIALNQHGTRALQKMIEFVTTPTQIEMIINA 488
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ S +D +++ + V +C + T + GCCVLQ C+++
Sbjct: 489 LRFQVVELIQDLNGNHVIQKCLNKLSAQDAQFIFDAVGTHCVDVGTHRHGCCVLQRCIDH 548
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G Q+ L+A+I +A +L +D +GNYVVQ+++ L P T ++R + S +K
Sbjct: 549 ASGDQKTWLIAKITEHAPILVQDPFGNYVVQYIIDLNEPSFTEPIVRMFQNRIGQLSRHK 608
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+CL S E I+ ELL + LL + NYVIQ+AL
Sbjct: 609 FSSNVIEKCLRCSQEPSRDMIVEELLTPGEIERLLRDSYANYVIQTAL 656
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 4/226 (1%)
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
V+Q ++ +E L L N Q+ +C + HG R + K LE NP+Q+ ++
Sbjct: 357 VIQHRRQMDNEAMSRYNGLALENVGGQIYDLCKDQHGCRYLQKKLEE-RNPEQVHMIWLE 415
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
+ L D G+Y+ Q ++ + ++ L+ A + IA ++ G LQ +E+
Sbjct: 416 TNQHVIELMTDPFGNYLCQKLLEFCNDDERTVLIQNAAADMVRIALNQHGTRALQKMIEF 475
Query: 323 -SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
+ Q E ++ + + L +D GN+V+Q L Q + + H V +
Sbjct: 476 VTTPTQIEMIINALRFQVVELIQDLNGNHVIQKCLNKLSAQDAQFIFDAVGTHCVDVGTH 535
Query: 382 KYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQ 427
++G V++RC+ + +Q T +I ++ + +L+ PFGNYV+Q
Sbjct: 536 RHGCCVLQRCIDHASGDQKTWLIAKITE--HAPILVQDPFGNYVVQ 579
>gi|225554623|gb|EEH02919.1| pumilio RNA binding protein [Ajellomyces capsulatus G186AR]
Length = 793
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 174/288 (60%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F + L +G + + KDQYGCR+LQ+ + ++MIF+E V ELM DPFGNY
Sbjct: 353 FGNAPLETYQGELYGMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNY 412
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQRT ++ N QLV+I LN HG RA+ K++E ++ P+Q V+ A
Sbjct: 413 LCQKLLEFSNDEQRT---ALINNAAPQLVKIALNQHGTRALQKMIEFISTPEQTQTVINA 469
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ S D +++ + V +C + T + GCCVLQ C+++
Sbjct: 470 LRDRVVELVQDLNGNHVIQKCLNRLSATDAQFIYDAVGASCVPVGTHRHGCCVLQRCIDH 529
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G QR RL+ +I NA L +D +GNYVVQ++L L P + R G+ + S K
Sbjct: 530 ASGDQRARLIEQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQK 589
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+C+ + + + ++ E+L + +L F NYV+Q+A+
Sbjct: 590 FSSNVIEKCIRTADPQSRSALVDEMLVPSELEKMLRDSFANYVVQTAM 637
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTM-SSLPKEEIEMIFVEVIDRVCELMI-DPFGNYVVQK 206
R RGNI AL+K ++ +++ + ++ P+ ++ ++ E M+ D F NYVVQ
Sbjct: 576 RSFRGNIPALSKQKFSSNVIEKCIRTADPQSRSALVDEMLVPSELEKMLRDSFANYVVQT 635
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
++ E RT+++ + L I HG R K+L
Sbjct: 636 AMDFADPEYRTKLVEAIRPI---LPAIRQTPHGRRIAGKIL 673
>gi|303319247|ref|XP_003069623.1| Pumilio-family RNA binding repeat containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240109309|gb|EER27478.1| Pumilio-family RNA binding repeat containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1003
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 118/284 (41%), Positives = 177/284 (62%), Gaps = 5/284 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L RG + L KDQ+GCR+LQR + E ++MIF+E V ELM DPFGNY+ QKL
Sbjct: 579 LEQYRGELYGLCKDQHGCRYLQRKLEERIPENVQMIFLETHVHVVELMTDPFGNYLCQKL 638
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E ++EQRT ++ N QLV I LN HG RA+ K++E ++ P+Q V+ ALR
Sbjct: 639 LEFSNDEQRT---ALINNAAPQLVSIALNQHGTRALQKMIEFISTPEQTQTVIKALRDKV 695
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L +D NG++VIQ C+ S D +++ + V +C + T + GCCVLQ C++++ G Q
Sbjct: 696 VDLVQDLNGNHVIQKCLNRLSAADAQFIYDAVGASCIAVGTHRHGCCVLQRCIDHASGDQ 755
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R +L+A+I A++ L +D +GNYVVQ++L L P+ T L + G S K+ SNV
Sbjct: 756 RAQLIAQITASSYTLVQDPFGNYVVQYILDLAEPRFTEPLCQTFIGKVSMLSKQKFSSNV 815
Query: 388 VERCLLESGEEQSTRIII-ELLRSPNVSMLLMHPFGNYVIQSAL 430
+E+C L + + QS R++I E+L + +L F NYV+Q+A+
Sbjct: 816 IEKC-LRTADFQSRRLLIQEMLPVNELERMLRDSFANYVVQTAM 858
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 7/215 (3%)
Query: 229 QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFS 288
+L +C + HG R + + LE P+ + ++ V L D G+Y+ Q ++ +
Sbjct: 585 ELYGLCKDQHGCRYLQRKLEERI-PENVQMIFLETHVHVVELMTDPFGNYLCQKLLEFSN 643
Query: 289 HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGAQRERLVAEIIANALLLAEDCY 347
E L+N A IA ++ G LQ +E+ S Q + ++ + + L +D
Sbjct: 644 DEQRTALINNAAPQLVSIALNQHGTRALQKMIEFISTPEQTQTVIKALRDKVVDLVQDLN 703
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHY-VSFSCNKYGSNVVERCLLESGEEQSTRIIIE 406
GN+V+Q L R+ A + G ++ +++G V++RC+ + +Q ++I +
Sbjct: 704 GNHVIQKCLN-RLSAADAQFIYDAVGASCIAVGTHRHGCCVLQRCIDHASGDQRAQLIAQ 762
Query: 407 LLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSSP 441
+ S L+ PFGNYV+Q L +++ R F+ P
Sbjct: 763 ITAS--SYTLVQDPFGNYVVQYILDLAEPR-FTEP 794
>gi|134055097|emb|CAK43737.1| unnamed protein product [Aspergillus niger]
Length = 765
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 115/283 (40%), Positives = 174/283 (61%), Gaps = 3/283 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +G + L KDQ+GCR+LQR + E ++MIF E V ELM DPFGNY+ QKL
Sbjct: 352 LEHYKGELYGLCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKL 411
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E ++EQRT ++ N QLV+I LN HG RA+ K++E ++ +Q V+ +L
Sbjct: 412 LEYSNDEQRTD---LINNAAHQLVKIALNQHGTRALQKMIEFISTAEQTQTVIHSLEDHV 468
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L +D NG++VIQ C+ S ED +++ + V NC + T + GCCVLQ C++++ G Q
Sbjct: 469 VELVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGDQ 528
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ RL+A+I ANA L +D +GNYVVQ++L L P T L + G+ + S K+ SNV
Sbjct: 529 KARLIAQITANAFALVQDPFGNYVVQYILDLAEPHFTEPLCQNFRGNIPALSKQKFSSNV 588
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+E+CL + + ++I E+L + +L F NYV+Q+A+
Sbjct: 589 IEKCLRTADFQIRRQMIDEMLAGAELEKMLRDSFANYVVQTAM 631
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 1/139 (0%)
Query: 292 TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYV 351
T + L YG+ D+ GC LQ +E + + E + + L D +GNY+
Sbjct: 348 TNFPLEHYKGELYGLCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYL 407
Query: 352 VQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSP 411
Q LL + L+ V + N++G+ +++ + + T+ +I L
Sbjct: 408 CQKLLEYSNDEQRTDLINNAAHQLVKIALNQHGTRALQKMIEFISTAEQTQTVIHSLED- 466
Query: 412 NVSMLLMHPFGNYVIQSAL 430
+V L+ GN+VIQ L
Sbjct: 467 HVVELVQDLNGNHVIQKCL 485
>gi|350638129|gb|EHA26485.1| hypothetical protein ASPNIDRAFT_55402 [Aspergillus niger ATCC 1015]
Length = 1507
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 115/283 (40%), Positives = 174/283 (61%), Gaps = 3/283 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +G + L KDQ+GCR+LQR + E ++MIF E V ELM DPFGNY+ QKL
Sbjct: 587 LEHYKGELYGLCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKL 646
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E ++EQRT ++ N QLV+I LN HG RA+ K++E ++ +Q V+ +L
Sbjct: 647 LEYSNDEQRTD---LINNAAHQLVKIALNQHGTRALQKMIEFISTAEQTQTVIHSLEDHV 703
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L +D NG++VIQ C+ S ED +++ + V NC + T + GCCVLQ C++++ G Q
Sbjct: 704 VELVQDLNGNHVIQKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGDQ 763
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ RL+A+I ANA L +D +GNYVVQ++L L P T L + G+ + S K+ SNV
Sbjct: 764 KARLIAQITANAFALVQDPFGNYVVQYILDLAEPHFTEPLCQNFRGNIPALSKQKFSSNV 823
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+E+CL + + ++I E+L + +L F NYV+Q+A+
Sbjct: 824 IEKCLRTADFQIRRQMIDEMLAGAELEKMLRDSFANYVVQTAM 866
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 1/139 (0%)
Query: 292 TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYV 351
T + L YG+ D+ GC LQ +E + + E + + L D +GNY+
Sbjct: 583 TNFPLEHYKGELYGLCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYL 642
Query: 352 VQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSP 411
Q LL + L+ V + N++G+ +++ + + T+ +I L
Sbjct: 643 CQKLLEYSNDEQRTDLINNAAHQLVKIALNQHGTRALQKMIEFISTAEQTQTVIHSLED- 701
Query: 412 NVSMLLMHPFGNYVIQSAL 430
+V L+ GN+VIQ L
Sbjct: 702 HVVELVQDLNGNHVIQKCL 720
>gi|154316386|ref|XP_001557514.1| hypothetical protein BC1G_04124 [Botryotinia fuckeliana B05.10]
Length = 1088
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/302 (40%), Positives = 180/302 (59%), Gaps = 7/302 (2%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F +L L G I AL KDQ+GCR+LQ+ + E++ MI++E V ELM DPFGNY
Sbjct: 659 FANVALEQLGGEIYALCKDQHGCRYLQKKLEDRNPEQVHMIWLETNQHVIELMTDPFGNY 718
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E C++E+RT +++ N LVRI LN HG RA+ K++E ++ Q+ ++ A
Sbjct: 719 LCQKLLEYCNDEERT---VLIENASHDLVRIALNQHGTRALQKMIEFISTAGQVQTIIGA 775
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ S D +++ + V +C + T + GCCVLQ C+++
Sbjct: 776 LRYRVVELIQDLNGNHVIQKCLNKLSPTDAQFIFDAVGQHCVDVGTHRHGCCVLQRCIDH 835
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G Q+ L+ +I NA +L +D +GNYVVQ++L L P T L+ G S K
Sbjct: 836 ASGDQKAWLIRQISNNAYVLVQDPFGNYVVQYILDLNEPIFTEPLVAMFAGRVAQLSKQK 895
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL----LVSKVRLF 438
+ SNV+E+CL + E +I E+L+ + LL F NYVIQ+AL L K RL
Sbjct: 896 FSSNVIEKCLRCAQEPSKDMLIEEMLQPTQLDGLLRDSFANYVIQTALDYANLNMKTRLI 955
Query: 439 SS 440
+
Sbjct: 956 EA 957
>gi|347835278|emb|CCD49850.1| similar to RNA-binding protein [Botryotinia fuckeliana]
Length = 794
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/302 (40%), Positives = 180/302 (59%), Gaps = 7/302 (2%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F +L L G I AL KDQ+GCR+LQ+ + E++ MI++E V ELM DPFGNY
Sbjct: 365 FANVALEQLGGEIYALCKDQHGCRYLQKKLEDRNPEQVHMIWLETNQHVIELMTDPFGNY 424
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E C++E+RT +++ N LVRI LN HG RA+ K++E ++ Q+ ++ A
Sbjct: 425 LCQKLLEYCNDEERT---VLIENASHDLVRIALNQHGTRALQKMIEFISTAGQVQTIIGA 481
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ S D +++ + V +C + T + GCCVLQ C+++
Sbjct: 482 LRYRVVELIQDLNGNHVIQKCLNKLSPTDAQFIFDAVGQHCVDVGTHRHGCCVLQRCIDH 541
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G Q+ L+ +I NA +L +D +GNYVVQ++L L P T L+ G S K
Sbjct: 542 ASGDQKAWLIRQISNNAYVLVQDPFGNYVVQYILDLNEPIFTEPLVAMFAGRVAQLSKQK 601
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL----LVSKVRLF 438
+ SNV+E+CL + E +I E+L+ + LL F NYVIQ+AL L K RL
Sbjct: 602 FSSNVIEKCLRCAQEPSKDMLIEEMLQPTQLDGLLRDSFANYVIQTALDYANLNMKTRLI 661
Query: 439 SS 440
+
Sbjct: 662 EA 663
>gi|295658885|ref|XP_002790002.1| pumilio domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226282085|gb|EEH37651.1| pumilio domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 1154
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 174/288 (60%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F + L +G + ++ KDQYGCR+LQ+ + ++MIF+E V ELM DPFGNY
Sbjct: 599 FGNAPLETYQGELYSMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNY 658
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQRT ++ N QLV+I LN HG RA+ K++E ++ P+Q V+ A
Sbjct: 659 LCQKLLEYSNDEQRT---ALINNAAPQLVKIALNQHGTRALQKMIEFISTPEQTQTVIKA 715
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ S D +++ + V +C + T + GCCVLQ C+++
Sbjct: 716 LRGRVVELVQDLNGNHVIQKCLNRLSATDAQFIYDAVGASCVPVGTHRHGCCVLQRCIDH 775
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G QR RL+ +I NA L +D +GNYVVQ++L L P + R G+ + S K
Sbjct: 776 ASGDQRARLIEQITKNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQK 835
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+C+ + + +I E+L + +L F NYV+Q+A+
Sbjct: 836 FSSNVIEKCIRTADNQCRAALIEEMLVPSELEKMLRDSFANYVVQTAM 883
>gi|409051228|gb|EKM60704.1| hypothetical protein PHACADRAFT_246773 [Phanerochaete carnosa
HHB-10118-sp]
Length = 976
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/290 (44%), Positives = 180/290 (62%), Gaps = 7/290 (2%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F L DL+G I +L KDQ+GCR+LQ+ + E +MIF E ELM DPFGNY
Sbjct: 533 FAGMRLEDLQGEIPSLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFGHFPELMTDPFGNY 592
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E C++EQR I + D LV I LN HG RAV K+++ L+ +QI ++ A
Sbjct: 593 LCQKLLEYCTDEQRNLICESVAQD---LVNISLNMHGTRAVQKMIDFLSTRRQIHSIIVA 649
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L V L KD NG++VIQ C+ + ED +++ N VA NC +AT + GCCVLQ CV++
Sbjct: 650 LSLHVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCVDH 709
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ QR +LV EI NAL L +D YGNYVVQ++L L + + +++RQ G+ + S K
Sbjct: 710 ASEPQRIQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQK 769
Query: 383 YGSNVVERCLLESGEEQSTR--IIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+C+ + E STR +I ELL + LL +GNY +Q+AL
Sbjct: 770 FSSNVIEKCVRVA--EHSTRKMLIGELLNRTRLEKLLRDSYGNYCVQTAL 817
>gi|398407841|ref|XP_003855386.1| pumilio-related RNA binding protein [Zymoseptoria tritici IPO323]
gi|339475270|gb|EGP90362.1| pumilio-related RNA binding protein [Zymoseptoria tritici IPO323]
Length = 1060
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 176/291 (60%), Gaps = 3/291 (1%)
Query: 140 QDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPF 199
Q F+ + L G I L KDQ+GCR LQR + ++ ++ IF EV + + ELM+DPF
Sbjct: 603 QAKFNSIKVEQLTGEIYTLCKDQHGCRFLQRKLEERNEQTVQAIFEEVRNHMIELMVDPF 662
Query: 200 GNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLV 259
GNY+ QKL+E +++QRT ++ N Q+ +I LN HG RA+ K++E ++ P+Q +L+
Sbjct: 663 GNYLCQKLLESANDDQRTELI---KNAMPQMTKIALNQHGTRALQKMIEFISTPEQTALI 719
Query: 260 LAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHC 319
+ ALR V L +D NG++VIQ C+ H S D ++ + V NC + T + GCCVLQ C
Sbjct: 720 IEALRNDVVLLIQDLNGNHVIQKCLNHLSSNDAIFIFDAVGANCITVGTHRHGCCVLQRC 779
Query: 320 VEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFS 379
++++ G Q+ +V +I NA L +D +GNYVVQ++L L P T L R G + S
Sbjct: 780 IDHADGLQKGEMVDHVIRNAYSLVQDPFGNYVVQYILDLSEPCFTEPLCRAFYGEIANLS 839
Query: 380 CNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
K+ SNV+E+C+ + E II E++ + +L F NYV+Q+A+
Sbjct: 840 RQKFSSNVMEKCIRCASNETKRAIISEIMAPQTIEKMLRDGFANYVVQTAM 890
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 98/207 (47%), Gaps = 4/207 (1%)
Query: 229 QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFS 288
++ +C + HG R + + LE N Q + + +R + L D G+Y+ Q ++ +
Sbjct: 617 EIYTLCKDQHGCRFLQRKLEE-RNEQTVQAIFEEVRNHMIELMVDPFGNYLCQKLLESAN 675
Query: 289 HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIAN-ALLLAEDCY 347
+ L+ IA ++ G LQ +E+ ++ L+ E + N +LL +D
Sbjct: 676 DDQRTELIKNAMPQMTKIALNQHGTRALQKMIEFISTPEQTALIIEALRNDVVLLIQDLN 735
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GN+V+Q L + + + ++ +++G V++RC+ + Q ++ +
Sbjct: 736 GNHVIQKCLNHLSSNDAIFIFDAVGANCITVGTHRHGCCVLQRCIDHADGLQKGEMVDHV 795
Query: 408 LRSPNVSMLLMHPFGNYVIQSALLVSK 434
+R N L+ PFGNYV+Q L +S+
Sbjct: 796 IR--NAYSLVQDPFGNYVVQYILDLSE 820
>gi|242085540|ref|XP_002443195.1| hypothetical protein SORBIDRAFT_08g015000 [Sorghum bicolor]
gi|241943888|gb|EES17033.1| hypothetical protein SORBIDRAFT_08g015000 [Sorghum bicolor]
Length = 678
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 178/285 (62%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+S+ ++ G + LAKDQ GCR LQR + +E+ + +F VI+ + ELMIDPFGNY++Q
Sbjct: 351 NSVDEVVGELYHLAKDQNGCRFLQRIFTEGSQEDAQKVFDGVIEHIDELMIDPFGNYLIQ 410
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E C++ Q+ IL +T QLV++ N HG R V K++E ++ ++S+V++AL
Sbjct: 411 KLLEQCNDNQKMHILYEITKIPGQLVKVACNMHGTRVVQKVIETVSTSDEVSMVVSALSH 470
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
GA+TL D NG +V C++ S + +LLN C +A D+ GCC++Q C+ ++
Sbjct: 471 GAITLMMDANGSHVAHRCLQKLSPKCKAFLLNAATKYCVELAKDRQGCCIIQKCIIHANK 530
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
Q+ +L+ I AL LAE YGNYV+Q +L L+V +L +LEG Y S K S
Sbjct: 531 EQKNKLLYSITGRALNLAEHQYGNYVIQFILDLKVTWAMNEILDKLEGSYGYLSMQKCSS 590
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
NVVE+CL E+ + +II+EL+ P + +L+ +GNYVIQ+A
Sbjct: 591 NVVEKCLKEARGPKRAKIILELINDPKLQNILLDQYGNYVIQTAF 635
>gi|380483203|emb|CCF40767.1| pumilio domain-containing protein [Colletotrichum higginsianum]
Length = 446
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 179/288 (62%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
++ +L + G I L KDQ+GCR+LQ+ + E++ MI++E V ELM DPFGNY
Sbjct: 4 YNGLALESVGGQIYDLCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNY 63
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E C++++RT +++ N +VRI LN HG RA+ K++E +T P QI +++ A
Sbjct: 64 LCQKLLEFCNDDERT---VLIQNAAVDMVRIALNQHGTRALQKMIEFVTTPTQIGMIINA 120
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ S D +++ + V NC + T + GCCVLQ C+++
Sbjct: 121 LRFQVVELIQDLNGNHVIQKCLNKLSALDAQFIFDAVGTNCVDVGTHRHGCCVLQRCIDH 180
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G Q+ L+A+I +A +L +D +GNYVVQ+++ L P T ++R + S +K
Sbjct: 181 ASGEQKVWLIAKITEHAPILVQDPFGNYVVQYIIDLNEPTFTEPIVRMFKNRIGQLSRHK 240
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+CL S E I+ ELL + LL + NYVIQ+AL
Sbjct: 241 FSSNVIEKCLRCSQEPSRDMIVEELLSPGEIERLLRDSYANYVIQTAL 288
>gi|429851913|gb|ELA27072.1| pumilio domain-containing protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 997
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 117/302 (38%), Positives = 185/302 (61%), Gaps = 7/302 (2%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
++ +L ++ G I L KDQ+GCR+LQ+ + E++ MI++E V ELM DPFGNY
Sbjct: 562 YNGLALENVGGQIYDLCKDQHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNY 621
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E C++++RT +++ N +VRI LN HG RA+ K++E +T QI +++ A
Sbjct: 622 LCQKLLEYCNDDERT---VLIQNAAADMVRIALNQHGTRALQKMIEFVTTSTQIEMIINA 678
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ S +D +++ + V NC + T + GCCVLQ C+++
Sbjct: 679 LRYQVVELIQDLNGNHVIQKCLNKLSAKDAQFIFDAVGTNCVDVGTHRHGCCVLQRCIDH 738
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G Q+ L+++I +A +L +D +GNYVVQ+++ L P T ++R + S +K
Sbjct: 739 ASGDQKVWLISKITEHAPILVQDPFGNYVVQYIIDLNEPSFTEPIVRMFKNRIGQLSRHK 798
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLV----SKVRLF 438
+ SNV+E+CL S E I+ ELL + LL + NYVIQ+AL SK RL
Sbjct: 799 FSSNVIEKCLRCSQEPSRDMIVEELLTPGEIERLLRDSYANYVIQTALEYATPHSKFRLV 858
Query: 439 SS 440
+
Sbjct: 859 DA 860
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 108/226 (47%), Gaps = 4/226 (1%)
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
V+Q ++ +E L L N Q+ +C + HG R + K LE NP+Q+ ++
Sbjct: 547 VIQHRRQMDNEAMSRYNGLALENVGGQIYDLCKDQHGCRYLQKKLEE-RNPEQVHMIWLE 605
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
+ L D G+Y+ Q +++ + ++ L+ A + IA ++ G LQ +E+
Sbjct: 606 TNQHVIELMTDPFGNYLCQKLLEYCNDDERTVLIQNAAADMVRIALNQHGTRALQKMIEF 665
Query: 323 -SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
+ Q E ++ + + L +D GN+V+Q L + + + + V +
Sbjct: 666 VTTSTQIEMIINALRYQVVELIQDLNGNHVIQKCLNKLSAKDAQFIFDAVGTNCVDVGTH 725
Query: 382 KYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQ 427
++G V++RC+ + +Q +I ++ + +L+ PFGNYV+Q
Sbjct: 726 RHGCCVLQRCIDHASGDQKVWLISKITE--HAPILVQDPFGNYVVQ 769
>gi|358055198|dbj|GAA98967.1| hypothetical protein E5Q_05655 [Mixia osmundae IAM 14324]
Length = 852
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/283 (42%), Positives = 175/283 (61%), Gaps = 3/283 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L DL+G++ AL KDQ+GCR LQR + E +MIF E+ ELM D FGNY+ QKL
Sbjct: 443 LEDLQGDMPALCKDQHGCRFLQRKLEEGNPEYRDMIFSEIFPHFAELMTDAFGNYLSQKL 502
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++EQR ++ ++ +LV I LN HG RAV KLL+ LT +Q+ ++ AL
Sbjct: 503 FEFATDEQRDALIDSISG---ELVSISLNMHGTRAVQKLLDFLTTRRQVQSLIMALNLNV 559
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
VTL KD N ++VIQ C+ H ED +++ N VA NC +AT + GCCVLQ C++++ +Q
Sbjct: 560 VTLIKDLNSNHVIQKCLNHLPPEDNQFIYNAVATNCIEVATHRHGCCVLQRCIDHASESQ 619
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R +LV EI N+L+L D +GNYVVQ++L L + +++RQ G+ + S K+ SNV
Sbjct: 620 RIQLVTEITYNSLILVGDPFGNYVVQYVLDLNDNRFIEAIVRQFVGNVCTLSAQKFSSNV 679
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
VE+C+ + ++ E L N+ +L F NYV+Q+AL
Sbjct: 680 VEKCIRVADAAGRKVLVNEFLNRNNLERMLRDSFANYVVQTAL 722
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 91/239 (38%), Gaps = 42/239 (17%)
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSE 213
N+V L KD +Q+ ++ LP E+ + I+ V E+ G V+Q+ ++ SE
Sbjct: 558 NVVTLIKDLNSNHVIQKCLNHLPPEDNQFIYNAVATNCIEVATHRHGCCVLQRCIDHASE 617
Query: 214 EQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKD 273
QR +++ +T + LV D
Sbjct: 618 SQRIQLVTEITYNSLILV----------------------------------------GD 637
Query: 274 TNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVA 333
G+YV+QY + + + ++ + N ++ K V++ C+ + A R+ LV
Sbjct: 638 PFGNYVVQYVLDLNDNRFIEAIVRQFVGNVCTLSAQKFSSNVVEKCIRVADAAGRKVLVN 697
Query: 334 EII--ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
E + N + D + NYVVQ L P L+R + S YG + +
Sbjct: 698 EFLNRNNLERMLRDSFANYVVQTALDWAEPAQKQELVRMITPLMPSIRNTPYGKRISAK 756
>gi|66804327|ref|XP_635942.1| hypothetical protein DDB_G0289987 [Dictyostelium discoideum AX4]
gi|60464289|gb|EAL62439.1| hypothetical protein DDB_G0289987 [Dictyostelium discoideum AX4]
Length = 1036
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/291 (39%), Positives = 185/291 (63%), Gaps = 5/291 (1%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+S+ + G+I L +DQ+GCR LQ+ + + E+IF EV D + ELM DPFGNY+ Q
Sbjct: 707 TSIDQVMGSIYPLCRDQHGCRFLQKKLEESDLQLTEIIFKEVCDYMLELMTDPFGNYLCQ 766
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E C++ QR I+ + D +VRI +N HG RAV K++E LT P+QI L+ +L+
Sbjct: 767 KLLEHCNDRQRLTIIEKVGTD---IVRISMNMHGTRAVQKMIEYLTTPEQIQLIKRSLKD 823
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADN--CYGIATDKSGCCVLQHCVEYS 323
V L +D NG++VIQ C+ S +D +++ + V+ + C +AT + GCCVLQ C++++
Sbjct: 824 SVVPLIQDLNGNHVIQKCLNKLSPQDNQFIYDAVSSDGSCIAVATHRHGCCVLQRCIDHA 883
Query: 324 KGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+Q+ +L+ E+IAN+L+L +D YGNYVVQ++L L + + ++ GH + K+
Sbjct: 884 SESQKLQLIQEVIANSLVLVQDPYGNYVVQYVLDLPFQGLATEMAKRFVGHVPILATQKF 943
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
SNVVE+CL + +I E++ N+ LL P+ NYVIQ++L +S+
Sbjct: 944 SSNVVEKCLHVADAITRGYLIQEVIDYDNLLHLLQDPYANYVIQTSLTISE 994
>gi|452986016|gb|EME85772.1| hypothetical protein MYCFIDRAFT_150818 [Pseudocercospora fijiensis
CIRAD86]
Length = 519
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 121/319 (37%), Positives = 184/319 (57%), Gaps = 6/319 (1%)
Query: 115 NGNELSSVPRNQWMSSLSLKRNQWLQDS---FDCSSLRDLRGNIVALAKDQYGCRHLQRT 171
NG R + +R Q +D+ F+ + L G I L KDQ+GCR LQR
Sbjct: 47 NGQAGPGAGRYDGQRVSAQQRRQAAEDAQAKFNSIKVEQLVGEIYGLCKDQHGCRFLQRK 106
Query: 172 MSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLV 231
+ ++ ++ IF EV D + ELM+DPFGNY+ QKL+E ++EQRT +++ N +
Sbjct: 107 LEERNEQTVKTIFEEVKDHMIELMVDPFGNYLCQKLLESVNDEQRTALIV---NAAPAMN 163
Query: 232 RICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHED 291
+I LN HG RA+ K++E +T P+Q ++ ALR V L +D NG++VIQ C+ H S D
Sbjct: 164 KIALNQHGTRALQKMIEYITTPEQTQEIIKALRNDVVLLIQDLNGNHVIQKCLNHLSSID 223
Query: 292 TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYV 351
++ V +NC + T + GCCVLQ C++++ G Q+ +V +IANA L +D +GNYV
Sbjct: 224 ATFIFEAVGNNCITVGTHRHGCCVLQRCIDHADGLQKGEMVDHVIANAYSLVQDPFGNYV 283
Query: 352 VQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSP 411
VQ++L L P T L R G + S K+ SNV+E+C+ + E I+ E++
Sbjct: 284 VQYILDLSEPCFTEPLCRAFYGEIPALSRQKFSSNVIEKCIRCASVETRREIVREIMPPQ 343
Query: 412 NVSMLLMHPFGNYVIQSAL 430
+ LL F NYV+Q+A+
Sbjct: 344 TLEKLLRDGFANYVVQTAM 362
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 103/208 (49%), Gaps = 6/208 (2%)
Query: 229 QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFS 288
++ +C + HG R + + LE N Q + + ++ + L D G+Y+ Q ++ +
Sbjct: 89 EIYGLCKDQHGCRFLQRKLEE-RNEQTVKTIFEEVKDHMIELMVDPFGNYLCQKLLESVN 147
Query: 289 HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGAQRERLVAEIIANALLLAEDCY 347
E L+ A IA ++ G LQ +EY + Q + ++ + + +LL +D
Sbjct: 148 DEQRTALIVNAAPAMNKIALNQHGTRALQKMIEYITTPEQTQEIIKALRNDVVLLIQDLN 207
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHY-VSFSCNKYGSNVVERCLLESGEEQSTRIIIE 406
GN+V+Q L + I A+ + + G+ ++ +++G V++RC+ + Q ++
Sbjct: 208 GNHVIQKCLN-HLSSIDATFIFEAVGNNCITVGTHRHGCCVLQRCIDHADGLQKGEMVDH 266
Query: 407 LLRSPNVSMLLMHPFGNYVIQSALLVSK 434
++ N L+ PFGNYV+Q L +S+
Sbjct: 267 VI--ANAYSLVQDPFGNYVVQYILDLSE 292
>gi|426201649|gb|EKV51572.1| hypothetical protein AGABI2DRAFT_114299 [Agaricus bisporus var.
bisporus H97]
Length = 975
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 181/290 (62%), Gaps = 7/290 (2%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F + L DL+G I L KDQ+GCR+LQ+ + + +MIF E + ELM DPFGNY
Sbjct: 524 FAGTRLEDLQGEIPTLCKDQHGCRYLQKKLEEGLPDHRDMIFRETFNHFHELMTDPFGNY 583
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQR I + +LV I LN HG RAV K+++ L+ +QI ++ A
Sbjct: 584 LCQKLLEFATDEQRNLICESVAQ---ELVNISLNMHGTRAVQKMIDFLSTRRQIHSIILA 640
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L V L KD NG++VIQ C+ + ED +++ N VA NC +AT + GCCVLQ C+++
Sbjct: 641 LSLHVVALIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDH 700
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ QR +LV EI NAL L +D YGNYVVQ++L L + + +++RQ +G+ + S K
Sbjct: 701 ASEHQRIQLVNEITYNALTLVQDPYGNYVVQYILDLNDSRFSDAVIRQFQGNVCALSVQK 760
Query: 383 YGSNVVERCLLESGEEQSTR--IIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+C+ + E STR +I ELL + LL +GNY +Q+AL
Sbjct: 761 FSSNVIEKCVRVA--EHSTRKLLIDELLNRSRLEKLLRDSYGNYCVQTAL 808
>gi|409083297|gb|EKM83654.1| hypothetical protein AGABI1DRAFT_88582 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 979
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 181/290 (62%), Gaps = 7/290 (2%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F + L DL+G I L KDQ+GCR+LQ+ + + +MIF E + ELM DPFGNY
Sbjct: 528 FAGTRLEDLQGEIPTLCKDQHGCRYLQKKLEEGLPDHRDMIFRETFNHFHELMTDPFGNY 587
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQR I + +LV I LN HG RAV K+++ L+ +QI ++ A
Sbjct: 588 LCQKLLEFATDEQRNLICESVAQ---ELVNISLNMHGTRAVQKMIDFLSTRRQIHSIILA 644
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L V L KD NG++VIQ C+ + ED +++ N VA NC +AT + GCCVLQ C+++
Sbjct: 645 LSLHVVALIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDH 704
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ QR +LV EI NAL L +D YGNYVVQ++L L + + +++RQ +G+ + S K
Sbjct: 705 ASEHQRIQLVNEITYNALTLVQDPYGNYVVQYILDLNDSRFSDAVIRQFQGNVCALSVQK 764
Query: 383 YGSNVVERCLLESGEEQSTR--IIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+C+ + E STR +I ELL + LL +GNY +Q+AL
Sbjct: 765 FSSNVIEKCVRVA--EHSTRKLLIDELLNRSRLEKLLRDSYGNYCVQTAL 812
>gi|299755883|ref|XP_001828946.2| pumilio-family RNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|298411424|gb|EAU92953.2| pumilio-family RNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 982
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/288 (42%), Positives = 176/288 (61%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F + L +L+G I L KDQ+GCR+LQ+ + E +MIF E ELM DPFGNY
Sbjct: 553 FAGTRLEELQGEIATLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFKHFAELMTDPFGNY 612
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E +++QR I + D LV I LN HG RAV K+++ L+ +QI ++ A
Sbjct: 613 LCQKLLEFATDDQRNLICESVAQD---LVNISLNMHGTRAVQKMIDFLSTRRQIHSIILA 669
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L V+L KD NG++VIQ C+ + ED +++ N VA NC +AT + GCCVLQ C+++
Sbjct: 670 LSLHVVSLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDH 729
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ AQR +LV EI NAL L +D YGNYVVQ++L L + + ++RQ G+ + S K
Sbjct: 730 ASEAQRIQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDGVIRQFLGNICALSVQK 789
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+C+ + +I ELL + LL +GNY +Q+AL
Sbjct: 790 FSSNVMEKCIRVAEHNTRKLVIEELLNRTRLEKLLRDSYGNYCVQTAL 837
>gi|425771288|gb|EKV09735.1| hypothetical protein PDIP_63380 [Penicillium digitatum Pd1]
gi|425776819|gb|EKV15020.1| hypothetical protein PDIG_28960 [Penicillium digitatum PHI26]
Length = 1020
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 173/288 (60%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F L +G + +L KDQ+GCR+LQR + +E +++IF E V ELM DPFGNY
Sbjct: 594 FGNYPLEHYKGELYSLCKDQHGCRYLQRKLEERNQEHVQLIFSETYMHVIELMTDPFGNY 653
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQRT ++ N +LV+I LN HG RA+ K++E ++ PQQ V+ A
Sbjct: 654 LCQKLLEYSNDEQRT---ALINNAAPELVKIALNQHGTRALQKMIEFISTPQQTQTVINA 710
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L+ V L +D NG++VIQ C+ S ED +++ V NC + T + GCCVLQ C+++
Sbjct: 711 LQYHVVDLVQDLNGNHVIQKCLNRLSPEDAEFIYEAVGGNCVVVGTHRHGCCVLQRCIDH 770
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G Q+ RL+++I +++ L +D +GNYVVQ++L L P T L G+ S K
Sbjct: 771 ASGHQKARLISQITSHSFALVQDPFGNYVVQYILDLAEPSFTNPLCATFGGNIPQLSKQK 830
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+CL + +I E L + +L F NYV+Q+A+
Sbjct: 831 FSSNVIEKCLRTADNYMKREMIDEFLMGNELEKMLRDSFANYVVQTAM 878
>gi|449550572|gb|EMD41536.1| hypothetical protein CERSUDRAFT_110088 [Ceriporiopsis subvermispora
B]
Length = 1043
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/350 (39%), Positives = 201/350 (57%), Gaps = 18/350 (5%)
Query: 94 INQDSSILNLLHNHNFD-GLRSNGNELSSVPRNQWMSSLSLKRNQWLQD--SFDCSSLRD 150
+N + L H+H GL NG + + + + KR ++ F + L D
Sbjct: 518 VNSATGSTALYHHHGSRYGLGMNGRQNGADSKMNGLHGPKHKRGDIDREFNRFAGTRLED 577
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L+G I L KDQ+GCR+LQ+ + E +MIF E +LM DPFGNY+ QKL+E
Sbjct: 578 LQGEIATLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFSHFADLMTDPFGNYLCQKLLEY 637
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLT-----NPQ---QISLVLAA 262
++EQR I + D LV I LN HG RAV K+++ L+ +P+ QI ++ A
Sbjct: 638 STDEQRNVICESVAQD---LVNISLNMHGTRAVQKMIDFLSTRRQADPKYNAQIHSIILA 694
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L V L KD NG++VIQ C+ + ED +++ N VA NC +AT + GCCVLQ C+++
Sbjct: 695 LSLHVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDH 754
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ AQR +LV EI NAL L +D YGNYVVQ++L L + + +++RQ G+ + S K
Sbjct: 755 ASDAQRVQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQK 814
Query: 383 YGSNVVERCLLESGEEQSTR--IIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+C+ + E STR +I ELL + LL +GNY +Q+AL
Sbjct: 815 FSSNVIEKCVRVA--EHSTRKMLIGELLNRTRLEKLLRDSYGNYCVQTAL 862
>gi|392597028|gb|EIW86350.1| ARM repeat-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 981
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 183/301 (60%), Gaps = 9/301 (2%)
Query: 134 KRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE 193
KR + F + L DL+G I AL KDQ+GCR+LQ+ + E +MIF E E
Sbjct: 516 KRGDMDLNRFAGTRLEDLQGEIPALCKDQHGCRYLQKKLEEGVVEHRDMIFRETFSHFAE 575
Query: 194 LM--IDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLT 251
LM +DPFGNY+ QKL+E ++EQR I + D LV I LN HG RAV K+++ L+
Sbjct: 576 LMTVLDPFGNYLCQKLLEYSTDEQRNLICESVAQD---LVNISLNMHGTRAVQKMIDFLS 632
Query: 252 NPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKS 311
+QI ++ AL V L KD NG++VIQ C+ S ED +++ N VA NC +AT +
Sbjct: 633 TRRQIHSIILALSLHVVVLIKDLNGNHVIQKCLNKLSPEDNQFIYNAVAANCVEVATHRH 692
Query: 312 GCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQL 371
GCCVLQ C++++ QR +LV EI NAL L +D YGNYVVQ++L L + + ++RQ
Sbjct: 693 GCCVLQRCIDHASDHQRIQLVNEITYNALTLVQDPYGNYVVQYVLDLNDNRFSEGVIRQF 752
Query: 372 EGHYVSFSCNKYGSNVVERCLLESGEEQSTRIII--ELLRSPNVSMLLMHPFGNYVIQSA 429
G+ + S K+ SNV+E+C+ + E STR I+ E+L + LL +GNY +Q+A
Sbjct: 753 TGNVCALSVQKFSSNVIEKCIRVA--EHSTRKILIEEVLNRSRLEKLLRDSYGNYCVQTA 810
Query: 430 L 430
L
Sbjct: 811 L 811
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 6/203 (2%)
Query: 155 IVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEE 214
+V L KD G +Q+ ++ L E+ + I+ V E+ G V+Q+ ++ S+
Sbjct: 648 VVVLIKDLNGNHVIQKCLNKLSPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASDH 707
Query: 215 QRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDT 274
QR +++ +T + LV+ + ++ VL L +N + V+ L+
Sbjct: 708 QRIQLVNEITYNALTLVQDPYGNYVVQYVLDLNDNRFS----EGVIRQFTGNVCALSVQK 763
Query: 275 NGHYVIQYCVKHFSHEDTKYLLNEVADNCY--GIATDKSGCCVLQHCVEYSKGAQRERLV 332
VI+ C++ H K L+ EV + + D G +Q ++Y++ +QR LV
Sbjct: 764 FSSNVIEKCIRVAEHSTRKILIEEVLNRSRLEKLLRDSYGNYCVQTALDYAEASQRALLV 823
Query: 333 AEIIANALLLAEDCYGNYVVQHL 355
I L+ YG + L
Sbjct: 824 EGIRPVLPLIRNTPYGKRIQNKL 846
>gi|296422247|ref|XP_002840673.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636894|emb|CAZ84864.1| unnamed protein product [Tuber melanosporum]
Length = 971
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 182/292 (62%), Gaps = 8/292 (2%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F + L L GNI L KDQ+GCR+LQ+ + + ++MIF+E V ELM DPFGNY
Sbjct: 587 FANTPLESLTGNIYELCKDQHGCRYLQKKLEERNPQYVQMIFLETHAHVVELMTDPFGNY 646
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQRT +++ QLV+I LN HG RA+ K++E +T P+QI V+ A
Sbjct: 647 LCQKLLEYANDEQRT---VLVNTAAPQLVKIALNQHGTRALQKMIEYITTPEQICTVIHA 703
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTK--YLLNEVADNCYGIATDKSGCCVLQHCV 320
L+ V L +D NG++VIQ C+ + E+ K ++ + V ++C + T + GCCVLQ C+
Sbjct: 704 LQSKVVELIQDLNGNHVIQKCLNRWKKEENKLQFIFDAVGEDCVAVGTHRHGCCVLQRCI 763
Query: 321 EYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSC 380
+++ GAQ+ +L+ +I A+A+ L D +GNYVVQ++L L P ++ L+ + G S
Sbjct: 764 DHAAGAQKVKLIQKITAHAIELVVDPFGNYVVQYILDLADPMLSEPLILKFRGRVCELSK 823
Query: 381 NKYGSNVVERCLLESGEEQSTRIIIE--LLRSPNVSMLLMHPFGNYVIQSAL 430
K+ SNV+E+C + E + +I+IE L + LL + NYVIQ+A+
Sbjct: 824 QKFSSNVIEKC-IRVAEPPTKKILIEEMLPNQAELEALLRDSYANYVIQTAM 874
>gi|67516077|ref|XP_657924.1| hypothetical protein AN0320.2 [Aspergillus nidulans FGSC A4]
gi|40746570|gb|EAA65726.1| hypothetical protein AN0320.2 [Aspergillus nidulans FGSC A4]
Length = 1515
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 175/288 (60%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F+ + R I L KDQ+GCR+LQR + ++++MIF E V ELM DPFGNY
Sbjct: 581 FNNHPIEYYRNEIYGLCKDQHGCRYLQRKLEERNDDQLQMIFAETHSHVIELMTDPFGNY 640
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQRT +++ QLV+I LN HG RA+ K++E ++ +Q V+ A
Sbjct: 641 LCQKLLEYSNDEQRT---VLVNKAAPQLVKIALNQHGTRALQKMIEFISTEEQTQTVIDA 697
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L+ V L +D NG++VIQ C+ + E ++++ + V C + T + GCCVLQ C+++
Sbjct: 698 LKDHVVELVQDLNGNHVIQKCLNRLTAEKSQFIYDAVGAQCVTVGTHRHGCCVLQRCIDH 757
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ GAQR RL+ +I NA L +D +GNYVVQ++L L + T L R+ S +K
Sbjct: 758 ASGAQRARLIEQITENAFALVQDPFGNYVVQYILDLAEARFTEPLCREFLSRIPKLSKHK 817
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+CL + EE ++I E+L + +L + NYV+Q+A+
Sbjct: 818 FSSNVIEKCLRTADEEMRRQMIEEMLAGDELEKMLRDSYANYVVQTAM 865
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 107/214 (50%), Gaps = 5/214 (2%)
Query: 229 QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFS 288
++ +C + HG R + + LE N Q+ ++ A + L D G+Y+ Q +++ +
Sbjct: 592 EIYGLCKDQHGCRYLQRKLEE-RNDDQLQMIFAETHSHVIELMTDPFGNYLCQKLLEYSN 650
Query: 289 HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALL-LAEDCY 347
E L+N+ A IA ++ G LQ +E+ ++ + V + + + ++ L +D
Sbjct: 651 DEQRTVLVNKAAPQLVKIALNQHGTRALQKMIEFISTEEQTQTVIDALKDHVVELVQDLN 710
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GN+V+Q L + + + + V+ +++G V++RC+ + Q R+I ++
Sbjct: 711 GNHVIQKCLNRLTAEKSQFIYDAVGAQCVTVGTHRHGCCVLQRCIDHASGAQRARLIEQI 770
Query: 408 LRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSSP 441
N L+ PFGNYV+Q L +++ R F+ P
Sbjct: 771 TE--NAFALVQDPFGNYVVQYILDLAEAR-FTEP 801
>gi|452845425|gb|EME47358.1| hypothetical protein DOTSEDRAFT_69329 [Dothistroma septosporum
NZE10]
Length = 1038
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 184/300 (61%), Gaps = 6/300 (2%)
Query: 134 KRNQWLQDS---FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
+R Q +D+ F+ + L+G I L KDQ+GCR LQR + ++ +++IF EV
Sbjct: 584 QRRQAAEDAQAKFNSIKVEQLQGEIYTLCKDQHGCRFLQRKLEERNEKTVQIIFEEVNTH 643
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+ +LM+DPFGNY+ QKL+E +++QRT +++ N + +I LN HG RA+ K++E +
Sbjct: 644 MVDLMVDPFGNYLCQKLLESTNDDQRT---VLIQNAKPAMTKIALNQHGTRALQKMIEYI 700
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
+ P+Q +L++ ALR V L +D NG++VIQ C+ H S D ++ + V +NC + T +
Sbjct: 701 STPEQTALIIDALRNDVVLLIQDLNGNHVIQKCLNHLSSIDAAFIFHAVGNNCITVGTHR 760
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GCCVLQ C++++ G Q+ +V +I NA L +D +GNYVVQ++L L P T L +
Sbjct: 761 HGCCVLQRCIDHADGLQKGEMVDHVIRNAYALVQDPFGNYVVQYILDLSEPCFTEPLCQA 820
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
G + S K+ SNV+E+C+ S E ++ E++ + + LL F NYV+Q+A+
Sbjct: 821 FFGEIPALSRQKFSSNVIEKCIRCSSETTKRSLVQEIMPTQVLEKLLRDGFANYVVQTAM 880
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 6/208 (2%)
Query: 229 QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFS 288
++ +C + HG R + + LE N + + ++ + V L D G+Y+ Q ++ +
Sbjct: 607 EIYTLCKDQHGCRFLQRKLEER-NEKTVQIIFEEVNTHMVDLMVDPFGNYLCQKLLESTN 665
Query: 289 HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIAN-ALLLAEDCY 347
+ L+ IA ++ G LQ +EY ++ L+ + + N +LL +D
Sbjct: 666 DDQRTVLIQNAKPAMTKIALNQHGTRALQKMIEYISTPEQTALIIDALRNDVVLLIQDLN 725
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHY-VSFSCNKYGSNVVERCLLESGEEQSTRIIIE 406
GN+V+Q L + I A+ + G+ ++ +++G V++RC+ + Q ++
Sbjct: 726 GNHVIQKCLN-HLSSIDAAFIFHAVGNNCITVGTHRHGCCVLQRCIDHADGLQKGEMVDH 784
Query: 407 LLRSPNVSMLLMHPFGNYVIQSALLVSK 434
++R N L+ PFGNYV+Q L +S+
Sbjct: 785 VIR--NAYALVQDPFGNYVVQYILDLSE 810
>gi|171689290|ref|XP_001909585.1| hypothetical protein [Podospora anserina S mat+]
gi|170944607|emb|CAP70718.1| unnamed protein product [Podospora anserina S mat+]
Length = 700
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 184/301 (61%), Gaps = 9/301 (2%)
Query: 136 NQWLQDS-----FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
N+ QDS + +L GNI +LA+DQ+GCR LQ+ + + E+ I+ EV+
Sbjct: 266 NRRQQDSEAMSRYQNMTLEKAEGNINSLARDQHGCRFLQKQLENRIPHEVHAIYREVLPH 325
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
V ELMIDPFGNY+ QKL+E C++++RT ++ N +V I LN HG RA+ K++E++
Sbjct: 326 VHELMIDPFGNYLCQKLLEYCTDDERTE---LIKNSAKDMVPIALNQHGTRALQKMIEHV 382
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
+N QI ++ AL+ VTL +D NG++VIQ C+ S E + ++ N V +NC + T +
Sbjct: 383 SNEVQIQMITDALKMQVVTLIQDLNGNHVIQKCLNKLSPEQSHFIFNAVGENCIDVGTHR 442
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GCCVLQ C++++ G Q+ L+ I NA L +D +GNYV+Q+++ L P T L+ Q
Sbjct: 443 HGCCVLQRCIDHANGQQKAWLIQCITNNAYRLVQDPFGNYVIQYIIDLNEPSFTEPLVAQ 502
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN-VSMLLMHPFGNYVIQSA 429
H ++ S K+ SNVVE+CL S E+ I+ ELL + + + L + NYV Q+A
Sbjct: 503 FRTHILTLSKLKFSSNVVEKCLRCSSEQSKNMIVSELLDAGSEIERCLRDSYANYVYQTA 562
Query: 430 L 430
L
Sbjct: 563 L 563
>gi|259489449|tpe|CBF89730.1| TPA: RNA-binding protein, putative (AFU_orthologue; AFUA_1G02510)
[Aspergillus nidulans FGSC A4]
Length = 650
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 175/288 (60%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F+ + R I L KDQ+GCR+LQR + ++++MIF E V ELM DPFGNY
Sbjct: 229 FNNHPIEYYRNEIYGLCKDQHGCRYLQRKLEERNDDQLQMIFAETHSHVIELMTDPFGNY 288
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQRT +++ QLV+I LN HG RA+ K++E ++ +Q V+ A
Sbjct: 289 LCQKLLEYSNDEQRT---VLVNKAAPQLVKIALNQHGTRALQKMIEFISTEEQTQTVIDA 345
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L+ V L +D NG++VIQ C+ + E ++++ + V C + T + GCCVLQ C+++
Sbjct: 346 LKDHVVELVQDLNGNHVIQKCLNRLTAEKSQFIYDAVGAQCVTVGTHRHGCCVLQRCIDH 405
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ GAQR RL+ +I NA L +D +GNYVVQ++L L + T L R+ S +K
Sbjct: 406 ASGAQRARLIEQITENAFALVQDPFGNYVVQYILDLAEARFTEPLCREFLSRIPKLSKHK 465
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+CL + EE ++I E+L + +L + NYV+Q+A+
Sbjct: 466 FSSNVIEKCLRTADEEMRRQMIEEMLAGDELEKMLRDSYANYVVQTAM 513
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 106/214 (49%), Gaps = 5/214 (2%)
Query: 229 QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFS 288
++ +C + HG R + + LE N Q+ ++ A + L D G+Y+ Q +++ +
Sbjct: 240 EIYGLCKDQHGCRYLQRKLEE-RNDDQLQMIFAETHSHVIELMTDPFGNYLCQKLLEYSN 298
Query: 289 HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGAQRERLVAEIIANALLLAEDCY 347
E L+N+ A IA ++ G LQ +E+ S Q + ++ + + + L +D
Sbjct: 299 DEQRTVLVNKAAPQLVKIALNQHGTRALQKMIEFISTEEQTQTVIDALKDHVVELVQDLN 358
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GN+V+Q L + + + + V+ +++G V++RC+ + Q R+I ++
Sbjct: 359 GNHVIQKCLNRLTAEKSQFIYDAVGAQCVTVGTHRHGCCVLQRCIDHASGAQRARLIEQI 418
Query: 408 LRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSSP 441
N L+ PFGNYV+Q L +++ R F+ P
Sbjct: 419 TE--NAFALVQDPFGNYVVQYILDLAEAR-FTEP 449
>gi|46107916|ref|XP_381017.1| hypothetical protein FG00841.1 [Gibberella zeae PH-1]
Length = 779
Score = 230 bits (587), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 191/326 (58%), Gaps = 5/326 (1%)
Query: 107 HNFDGLRSNGNELSSVPRNQWMSSLSLKR--NQWLQDSFDCSSLRDLRGNIVALAKDQYG 164
N++G + S+ PR+ + +R + F L G I L KDQ+G
Sbjct: 297 QNYNGYNAGHYNQSNQPRDSQARVMQHRRQLDNEAMSRFQNMPLESFVGTIYELCKDQHG 356
Query: 165 CRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLT 224
CR+LQ+ + +++ MI+ E V ELM DPFGNY+ QKL+E C++++RT ++ +
Sbjct: 357 CRYLQKKLEERNPDQVHMIWNETNKHVIELMTDPFGNYLCQKLLEFCNDDERTTLIQNAS 416
Query: 225 NDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCV 284
D +VRI LN HG RA+ K++E ++ PQQ+ +++ ALR V L +D NG++VIQ C+
Sbjct: 417 QD---MVRIALNQHGTRALQKMIEYVSTPQQVHIIIEALRFRVVELIQDLNGNHVIQKCL 473
Query: 285 KHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAE 344
+D +++ + V +NC + T + GCCVLQ C++++ G Q+ L+ I +A +L +
Sbjct: 474 NRLPPQDAQFIFDAVGNNCVEVGTHRHGCCVLQRCIDHASGDQKLWLIQRITEHARVLVQ 533
Query: 345 DCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRII 404
D +GNYVVQ+++ L P T +++ + S +K+ SNV+E+CL S I+
Sbjct: 534 DPFGNYVVQYIIDLNEPIFTEPIVQTFKDCISQLSRHKFSSNVIEKCLRCSQPPSRDLIV 593
Query: 405 IELLRSPNVSMLLMHPFGNYVIQSAL 430
ELLR+ ++ LL F NYVIQ+AL
Sbjct: 594 DELLRNQDMERLLRDSFANYVIQTAL 619
>gi|393218870|gb|EJD04358.1| ARM repeat-containing protein [Fomitiporia mediterranea MF3/22]
Length = 1018
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 179/305 (58%), Gaps = 11/305 (3%)
Query: 134 KRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE 193
KR + F + L DL+G I +L KDQ+GCR+LQ+ + E +MIF E E
Sbjct: 520 KRGDIDLNRFAGTRLEDLQGEIASLCKDQHGCRYLQKKLEEGNAEHRDMIFRETFGHFAE 579
Query: 194 LMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNP 253
LM DPFGNY+ QKL+E +++QR I + D LV I LN HG RAV K+++ L+
Sbjct: 580 LMTDPFGNYLCQKLLEYSTDDQRNVICESVAQD---LVNISLNMHGTRAVQKMIDFLSTQ 636
Query: 254 QQISL--------VLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
+Q L ++ AL V L KD NG++VIQ C+ + ED +++ N VA NC
Sbjct: 637 RQADLRYNAQIHSIIVALSLHVVVLIKDLNGNHVIQKCLNKLTPEDNQFIYNAVAANCVE 696
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+AT + GCCVLQ C++++ QR +LV EI NAL L +D YGNYVVQ++L L + +
Sbjct: 697 VATHRHGCCVLQRCIDHASDHQRIQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSD 756
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
+++RQ G+ + S K+ SNV+E+C+ + +I ELL + LL FGNY
Sbjct: 757 AVIRQFTGNVCALSVQKFSSNVIEKCIRVAEHNTRKMLIEELLNRTRLEKLLRDSFGNYC 816
Query: 426 IQSAL 430
+Q+AL
Sbjct: 817 VQTAL 821
>gi|302923594|ref|XP_003053709.1| hypothetical protein NECHADRAFT_65753 [Nectria haematococca mpVI
77-13-4]
gi|256734650|gb|EEU47996.1| hypothetical protein NECHADRAFT_65753 [Nectria haematococca mpVI
77-13-4]
Length = 829
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/331 (36%), Positives = 189/331 (57%), Gaps = 5/331 (1%)
Query: 102 NLLHNHNFDGLRSNGNELSSVPRNQWMSSLSLKR--NQWLQDSFDCSSLRDLRGNIVALA 159
N+ NF+G S + PR+ + +R + + L G I L
Sbjct: 310 NVYPPQNFNGYNSLPYNQGNQPRDSQARVIQHRRQLDNEAMSRYQNMPLDSFTGQIYDLC 369
Query: 160 KDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRI 219
KDQ+GCR+LQ+ + E++ MI++E V ELM DPFGNY+ QKL+E C++++RT
Sbjct: 370 KDQHGCRYLQKKLEERNAEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDDERT-- 427
Query: 220 LLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYV 279
+++ N +VRI LN HG RA+ K++E ++ PQQ+ L++ ALR V L +D NG++V
Sbjct: 428 -VLIQNASQDMVRIALNQHGTRALQKMIEYVSTPQQVHLIIEALRFRVVELIQDLNGNHV 486
Query: 280 IQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANA 339
IQ C+ + D +++ + V NC + T + GCCVLQ C++++ G Q+ L+ I +A
Sbjct: 487 IQKCLNKLTAPDAQFIFDAVGHNCIEVGTHRHGCCVLQRCIDHASGDQKLWLIQRITEHA 546
Query: 340 LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQ 399
+L +D +GNYVVQ+++ L P T ++ +G S +K+ SNV+E+CL +
Sbjct: 547 RVLVQDPFGNYVVQYIIDLNEPTFTEPIVGMFQGCISQLSRHKFSSNVIEKCLRCAQAPS 606
Query: 400 STRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
I+ ELL + LL F NYVIQ+AL
Sbjct: 607 KDMIVEELLGPQEMERLLRDSFANYVIQTAL 637
>gi|358396949|gb|EHK46324.1| hypothetical protein TRIATDRAFT_153608 [Trichoderma atroviride IMI
206040]
Length = 757
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 175/288 (60%), Gaps = 5/288 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L RG I L KDQ+GCR+LQ+ + +++ MI++E V ELM DPFGNY+ QKL
Sbjct: 321 LDSFRGQIYELCKDQHGCRYLQKKLEERNSDQVHMIWLETNQHVIELMTDPFGNYLCQKL 380
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E C++++RT +++ N ++ I LN HG RA+ K++E ++ PQQI L++ ALR
Sbjct: 381 LEFCNDDERT---VLIQNASQRMEDIALNQHGTRALQKMIEYVSTPQQIHLIIEALRNRV 437
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVA--DNCYGIATDKSGCCVLQHCVEYSKG 325
V L KD NG++VIQ C+ + D +++ + V D C + T + GCCVLQ C++++ G
Sbjct: 438 VKLIKDLNGNHVIQKCLNKLTATDAQFIFDAVGNGDKCVEVGTHRHGCCVLQRCIDHATG 497
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
Q+ L+ I +A +L +D +GNYVVQ+++ L P T ++ +G S +K+ S
Sbjct: 498 EQKLWLIQRITEHARILVQDPFGNYVVQYIIDLNEPTFTEPIVGMFQGCIAQLSRHKFSS 557
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVS 433
NV+E+CL + I+ ELL P + LL F NYVIQ+AL S
Sbjct: 558 NVIEKCLRCAQAPSKDMIVEELLSQPEMERLLRDSFANYVIQTALEFS 605
>gi|342879890|gb|EGU81123.1| hypothetical protein FOXB_08397 [Fusarium oxysporum Fo5176]
Length = 1061
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 192/331 (58%), Gaps = 5/331 (1%)
Query: 102 NLLHNHNFDGLRSNGNELSSVPRNQWMSSLSLKR--NQWLQDSFDCSSLRDLRGNIVALA 159
N+ N++G + + PR+ + +R + + + L GNI L
Sbjct: 556 NMYQPQNYNGYNAGPYNQGNQPRDSQARVIQHRRQLDNEAMSRYQNTPLDSFVGNIYELC 615
Query: 160 KDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRI 219
KDQ+GCR+LQ+ + +++ +I+VE V ELM DPFGNY+ QKL+E C++++RT
Sbjct: 616 KDQHGCRYLQKKLEERNADQVHIIWVETNQHVIELMTDPFGNYLCQKLLEFCNDDERT-- 673
Query: 220 LLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYV 279
+++ N +VRI LN HG RA+ K++E ++ PQQ+ +++ ALR V L +D NG++V
Sbjct: 674 -VLIQNASQDMVRIALNQHGTRALQKMIEYVSTPQQVHIIIEALRYRVVELIQDLNGNHV 732
Query: 280 IQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANA 339
IQ C+ + D +++ + V +C + T + GCCVLQ C++++ G Q+ L+ I +A
Sbjct: 733 IQKCLNKLTPPDAQFIFDAVGGSCVEVGTHRHGCCVLQRCIDHASGDQKLWLIQRITEHA 792
Query: 340 LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQ 399
+L +D +GNYVVQ+++ L P T ++ + S +K+ SNV+E+CL +
Sbjct: 793 RILVQDPFGNYVVQYIIDLNEPLFTEPIVLTFKDCITQLSRHKFSSNVIEKCLRCAQPPS 852
Query: 400 STRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
I+ ELLR+ + LL F NYVIQ+AL
Sbjct: 853 KDLIVEELLRNQEMERLLRDSFANYVIQTAL 883
>gi|453088007|gb|EMF16048.1| ARM repeat-containing protein [Mycosphaerella populorum SO2202]
Length = 1055
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/298 (38%), Positives = 177/298 (59%), Gaps = 3/298 (1%)
Query: 140 QDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPF 199
Q ++ + L G I L KDQ+GCR LQR + ++ +++IF EV + + ELM+DPF
Sbjct: 617 QAKYNSIKVEQLTGEIYNLCKDQHGCRFLQRKLEERNEKTVQVIFDEVKEHMIELMVDPF 676
Query: 200 GNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLV 259
GNY+ QKL+E ++ QRT +++ N + +I LN HG RA+ K++E ++ P+QI L+
Sbjct: 677 GNYLCQKLLESANDNQRT---ILIENASPSMTKIALNQHGTRALQKMIEYISTPEQIQLI 733
Query: 260 LAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHC 319
+ AL V L +D NG++VIQ C+ H S D ++ V +C + T + GCCVLQ C
Sbjct: 734 VKALGNDVVVLIQDLNGNHVIQKCLNHLSSIDASFIFEAVGAHCITVGTHRHGCCVLQRC 793
Query: 320 VEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFS 379
++++ G Q+ ++V +I NA L +D +GNYVVQ++L L P T L R G + S
Sbjct: 794 IDHADGLQKGQMVDHVIRNAYALVQDPFGNYVVQYILDLSEPCFTEPLCRAFYGEVPALS 853
Query: 380 CNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
K+ SNV+E+C+ S E +I EL+ + LL F NYV+Q+A+ S L
Sbjct: 854 RQKFSSNVIEKCIRCSSNETRRELIRELMVPQVLEKLLRDGFANYVVQTAMEFSDDEL 911
>gi|440631710|gb|ELR01629.1| hypothetical protein GMDG_00005 [Geomyces destructans 20631-21]
Length = 1077
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 175/289 (60%), Gaps = 4/289 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F +L L G I +L KDQ+GCR LQ+ + E+I MI++E V ELM DPFGNY
Sbjct: 619 FANVALESLGGEIYSLCKDQHGCRFLQKKLEERNAEQIHMIWLETNQHVVELMTDPFGNY 678
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E C++E+RT +++ N L+RI LN HG RA+ K++E ++ QI ++ A
Sbjct: 679 LCQKLLEFCNDEERT---VLIENASQDLLRIALNQHGTRALQKMIEFISTAGQIQTIIEA 735
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ S D +++ + V +C + T + GCCVLQ C+++
Sbjct: 736 LRYQVVELIQDLNGNHVIQKCLNKLSPLDAQFIFDAVGRHCVDVGTHRHGCCVLQRCIDH 795
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G Q+ L+ +I NA L +D +GNYVVQ++L L P T L+ G S K
Sbjct: 796 ASGDQKAWLIRQISNNAFTLVQDPFGNYVVQYILDLNEPIFTEPLVAMFAGRVGQLSRQK 855
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSP-NVSMLLMHPFGNYVIQSAL 430
+ SNV+E+CL + E +I E+L +P ++ LL F NYV+Q+AL
Sbjct: 856 FSSNVIEKCLRCAQEPSKDMLIEEMLATPADLERLLRDSFANYVVQTAL 904
>gi|328866633|gb|EGG15016.1| hypothetical protein DFA_09838 [Dictyostelium fasciculatum]
Length = 1352
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 183/291 (62%), Gaps = 5/291 (1%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+S+ + +I L +DQ+GCR LQ+ + + E+IF EV + + ELM DPFGNY+ Q
Sbjct: 1026 TSIDQISSSIYPLCRDQHGCRFLQKKLEEGDEPLTELIFKEVCEYMLELMTDPFGNYLCQ 1085
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E C++ QR I+ + D +VRI +N HG RAV K++E LT P+QI+L+ +L
Sbjct: 1086 KLLEHCNDRQRLVIIDKVGPD---IVRISMNMHGTRAVQKMIEFLTTPEQIALIKKSLAQ 1142
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVAD--NCYGIATDKSGCCVLQHCVEYS 323
V L +D NG++VIQ C+ + D +++ + V+ NC +AT + GCCVLQ C++++
Sbjct: 1143 HVVPLIQDLNGNHVIQKCLNKLAPPDNQFIYDSVSSSANCIAVATHRHGCCVLQRCIDHA 1202
Query: 324 KGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
Q+ +L+ E+IAN+L+L +D +GNYVVQ++L L P +T + ++ GH + K+
Sbjct: 1203 SETQKVQLIQEVIANSLVLVQDPFGNYVVQYVLDLPFPGLTCEMAKRFVGHVSILATQKF 1262
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
SNVVE+CL + +I EL+ + LL PF NYVIQ++L +++
Sbjct: 1263 SSNVVEKCLHVADPITRGNLIQELIDCDTLLHLLQDPFANYVIQTSLTIAE 1313
>gi|358378205|gb|EHK15887.1| hypothetical protein TRIVIDRAFT_164108, partial [Trichoderma virens
Gv29-8]
Length = 751
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 111/286 (38%), Positives = 175/286 (61%), Gaps = 5/286 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L RG I L KDQ+GCR+LQ+ + +++ MI++E V ELM DPFGNY+ QKL
Sbjct: 321 LESFRGQIYELCKDQHGCRYLQKKLEEREGDQVHMIWLETNQHVIELMTDPFGNYLCQKL 380
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E C++++RT +++ N +VRI LN HG RA+ K++E ++ PQQ+ L++ ALR
Sbjct: 381 LEFCNDDERT---VLIQNASKDMVRIALNQHGTRALQKMIEYVSTPQQVHLIIEALRFRV 437
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L +D NG++VIQ C+ + D +++ + V +NC + T + GCCVLQ C++++ G Q
Sbjct: 438 VELIQDLNGNHVIQKCLNKLTASDAQFIFDAVGNNCVEVGTHRHGCCVLQRCIDHATGQQ 497
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ L+ I +A +L +D +GNYVVQ+++ L P T ++ +G S +K+ SNV
Sbjct: 498 KLWLIQRITEHARILVQDPFGNYVVQYIIDLNEPTFTEPIVATFQGCISQLSRHKFSSNV 557
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVS 433
+E+CL + I+ E+L + L F NYVIQ+AL S
Sbjct: 558 IEKCLRCAQAPSKDMIVEEILNE--MERFLRDSFANYVIQTALDFS 601
>gi|408388462|gb|EKJ68146.1| hypothetical protein FPSE_11613 [Fusarium pseudograminearum CS3096]
Length = 859
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 177/288 (61%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F L G I L KDQ+GCR+LQ+ + +++ MI+ E V ELM DPFGNY
Sbjct: 336 FQNMPLESFVGTIYELCKDQHGCRYLQKKLEERNPDQVHMIWNETNKHVIELMTDPFGNY 395
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E C++++RT ++ + D +VRI LN HG RA+ K++E ++ PQQ+ +++ A
Sbjct: 396 LCQKLLEFCNDDERTTLIQNASQD---MVRIALNQHGTRALQKMIEYVSTPQQVHIIIEA 452
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ +D +++ + V +NC + T + GCCVLQ C+++
Sbjct: 453 LRFRVVELIQDLNGNHVIQKCLNRLPPQDAQFIFDAVGNNCVEVGTHRHGCCVLQRCIDH 512
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G Q+ L+ I +A +L +D +GNYVVQ+++ L P T +++ + S +K
Sbjct: 513 ASGDQKLWLIQRITEHARVLVQDPFGNYVVQYIIDLNEPIFTEPIVQTFKDCISQLSRHK 572
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+CL S I+ ELLR+ ++ LL F NYVIQ+AL
Sbjct: 573 FSSNVIEKCLRCSQPPSRDLIVDELLRNQDMERLLRDSFANYVIQTAL 620
>gi|405119110|gb|AFR93883.1| pumilio-family RNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 981
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 125/309 (40%), Positives = 184/309 (59%), Gaps = 10/309 (3%)
Query: 129 SSLSLKRNQWLQDS----FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIF 184
S+ LK + QD F + DL+G +++L KDQ+GCR+LQ+ + + +MIF
Sbjct: 421 GSMGLKNKRADQDREFNRFAGVRIEDLKGELLSLCKDQHGCRYLQKKLEDGDPKHRDMIF 480
Query: 185 VEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVL 244
E ELM DPFGNY+ QKL+E +EEQR+ I+ + ND LV I LN HG RAV
Sbjct: 481 NETYGHFPELMTDPFGNYLCQKLLEYSTEEQRSAIIDSVAND---LVGISLNMHGTRAVQ 537
Query: 245 KLLENLTNP---QQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVAD 301
K+++ L P +QI ++ AL V L KD NG++VIQ C+ ED +++ N +A
Sbjct: 538 KMVDFLAQPRQPKQIRTLILALSMNVVALIKDLNGNHVIQKCLNKLIPEDNQFIYNAIAA 597
Query: 302 NCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP 361
N +AT + GCCVLQ ++++ AQR +LV EII N+L L +D +GNYV+Q++L L
Sbjct: 598 NLIEVATHRHGCCVLQRSIDHASPAQRMQLVTEIIFNSLYLVQDPFGNYVIQYILDLNDA 657
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
+ + L+R G+ S S K+ SNVVE+C+ + E ++ E+L + LL +
Sbjct: 658 RFSEPLIRTFIGNVCSLSVQKFSSNVVEKCIRVADPEIRKVLVGEVLNRSRLEKLLRDSY 717
Query: 422 GNYVIQSAL 430
GNYVIQ+ L
Sbjct: 718 GNYVIQTIL 726
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 108/217 (49%), Gaps = 8/217 (3%)
Query: 229 QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFS 288
+L+ +C + HG R + K LE+ +P+ ++ L D G+Y+ Q +++ +
Sbjct: 450 ELLSLCKDQHGCRYLQKKLED-GDPKHRDMIFNETYGHFPELMTDPFGNYLCQKLLEYST 508
Query: 289 HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY----SKGAQRERLVAEIIANALLLAE 344
E +++ VA++ GI+ + G +Q V++ + Q L+ + N + L +
Sbjct: 509 EEQRSAIIDSVANDLVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLILALSMNVVALIK 568
Query: 345 DCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRII 404
D GN+V+Q L +P+ + + + + + +++G V++R + + Q +++
Sbjct: 569 DLNGNHVIQKCLNKLIPEDNQFIYNAIAANLIEVATHRHGCCVLQRSIDHASPAQRMQLV 628
Query: 405 IELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSSP 441
E++ N L+ PFGNYVIQ L ++ R FS P
Sbjct: 629 TEIIF--NSLYLVQDPFGNYVIQYILDLNDAR-FSEP 662
>gi|361131374|gb|EHL03072.1| putative Pumilio domain-containing protein C6G9.14 [Glarea
lozoyensis 74030]
Length = 626
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 179/290 (61%), Gaps = 3/290 (1%)
Query: 141 DSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFG 200
+ F +L L G I L KDQ+GCR+LQ+ + +++ MI++E V ELM DPFG
Sbjct: 193 NRFANLALEQLGGEIYNLCKDQHGCRYLQKKLEDRNPDQVHMIWLETNQHVIELMTDPFG 252
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVL 260
NY+ QKL+E C++E+RT +++ N LVRI LN HG RA+ K++E ++ QI++++
Sbjct: 253 NYLCQKLLEYCNDEERT---VLIENASHDLVRIALNQHGTRALQKMIEFISTETQINIII 309
Query: 261 AALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCV 320
+L+ V L +D NG++VIQ C+ + + ++++ + V +C + T + GCCVLQ C+
Sbjct: 310 RSLKNRVVELIQDLNGNHVIQKCLNRLTAQQSQFIFDAVGIHCIDVGTHRHGCCVLQRCI 369
Query: 321 EYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSC 380
+++ G Q+ L+ +I NA +L +D +GNYVVQ++L L P T L+ +G S
Sbjct: 370 DHASGDQKSWLIRQISNNAYVLVQDPFGNYVVQYILDLNEPIFTEPLVAMFQGRVGQLSK 429
Query: 381 NKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
K+ SNV+E+CL + E +I E+L+ + LL F NYVIQ+AL
Sbjct: 430 QKFSSNVIEKCLRCAKEPSKDMLIEEMLQPTELDRLLRDSFANYVIQTAL 479
>gi|321254126|ref|XP_003192973.1| RNA-binding protein of the pumilio family [Cryptococcus gattii
WM276]
gi|317459442|gb|ADV21186.1| RNA-binding protein of the pumilio family, putative [Cryptococcus
gattii WM276]
Length = 950
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 125/309 (40%), Positives = 184/309 (59%), Gaps = 10/309 (3%)
Query: 129 SSLSLKRNQWLQDS----FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIF 184
S+ LK + QD F + DL+G +++L KDQ+GCR+LQ+ + + +MIF
Sbjct: 422 GSMGLKNKRADQDREFNRFAGVRIEDLKGELLSLCKDQHGCRYLQKKLEDGDPKHRDMIF 481
Query: 185 VEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVL 244
E ELM DPFGNY+ QKL+E +EEQR+ I+ + ND LV I LN HG RAV
Sbjct: 482 NETYGHFPELMTDPFGNYLCQKLLEYSTEEQRSAIIDSVAND---LVGISLNMHGTRAVQ 538
Query: 245 KLLENLTNP---QQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVAD 301
K+++ L P +QI ++ AL V L KD NG++VIQ C+ ED +++ N +A
Sbjct: 539 KMVDFLAQPRQPKQIRTLILALSMNVVALIKDLNGNHVIQKCLNKLIPEDNQFIYNAIAA 598
Query: 302 NCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP 361
N +AT + GCCVLQ ++++ AQR +LV EII N+L L +D +GNYV+Q++L L
Sbjct: 599 NLIEVATHRHGCCVLQRSIDHASPAQRMQLVTEIIFNSLYLVQDPFGNYVIQYILDLNDA 658
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
+ + L+R G+ S S K+ SNVVE+C+ + E ++ E+L + LL +
Sbjct: 659 RFSEPLIRTFIGNVCSLSVQKFSSNVVEKCIRVADPEIRKVLVGEVLNRSRLEKLLRDSY 718
Query: 422 GNYVIQSAL 430
GNYVIQ+ L
Sbjct: 719 GNYVIQTIL 727
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 108/217 (49%), Gaps = 8/217 (3%)
Query: 229 QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFS 288
+L+ +C + HG R + K LE+ +P+ ++ L D G+Y+ Q +++ +
Sbjct: 451 ELLSLCKDQHGCRYLQKKLED-GDPKHRDMIFNETYGHFPELMTDPFGNYLCQKLLEYST 509
Query: 289 HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY----SKGAQRERLVAEIIANALLLAE 344
E +++ VA++ GI+ + G +Q V++ + Q L+ + N + L +
Sbjct: 510 EEQRSAIIDSVANDLVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLILALSMNVVALIK 569
Query: 345 DCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRII 404
D GN+V+Q L +P+ + + + + + +++G V++R + + Q +++
Sbjct: 570 DLNGNHVIQKCLNKLIPEDNQFIYNAIAANLIEVATHRHGCCVLQRSIDHASPAQRMQLV 629
Query: 405 IELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSSP 441
E++ N L+ PFGNYVIQ L ++ R FS P
Sbjct: 630 TEIIF--NSLYLVQDPFGNYVIQYILDLNDAR-FSEP 663
>gi|58265692|ref|XP_570002.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134109369|ref|XP_776799.1| hypothetical protein CNBC2900 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259479|gb|EAL22152.1| hypothetical protein CNBC2900 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226234|gb|AAW42695.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 948
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 125/309 (40%), Positives = 184/309 (59%), Gaps = 10/309 (3%)
Query: 129 SSLSLKRNQWLQDS----FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIF 184
S+ LK + QD F + DL+G +++L KDQ+GCR+LQ+ + + +MIF
Sbjct: 421 GSVGLKNKRADQDREFNRFAGVRIEDLKGELLSLCKDQHGCRYLQKKLEDGDPKHRDMIF 480
Query: 185 VEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVL 244
E ELM DPFGNY+ QKL+E +EEQR+ I+ + ND LV I LN HG RAV
Sbjct: 481 NETYGHFPELMTDPFGNYLCQKLLEYSTEEQRSAIIDSVAND---LVGISLNMHGTRAVQ 537
Query: 245 KLLENLTNP---QQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVAD 301
K+++ L P +QI ++ AL V L KD NG++VIQ C+ ED +++ N +A
Sbjct: 538 KMVDFLAQPRQPKQIRTLILALSMNVVALIKDLNGNHVIQKCLNKLIPEDNQFIYNAIAA 597
Query: 302 NCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP 361
N +AT + GCCVLQ ++++ AQR +LV EII N+L L +D +GNYV+Q++L L
Sbjct: 598 NLIEVATHRHGCCVLQRSIDHASPAQRMQLVTEIIFNSLYLVQDPFGNYVIQYILDLNDA 657
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
+ + L+R G+ S S K+ SNVVE+C+ + E ++ E+L + LL +
Sbjct: 658 RFSEPLIRTFIGNVCSLSVQKFSSNVVEKCIRVADPEIRKVLVGEVLNRSRLEKLLRDSY 717
Query: 422 GNYVIQSAL 430
GNYVIQ+ L
Sbjct: 718 GNYVIQTIL 726
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 108/217 (49%), Gaps = 8/217 (3%)
Query: 229 QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFS 288
+L+ +C + HG R + K LE+ +P+ ++ L D G+Y+ Q +++ +
Sbjct: 450 ELLSLCKDQHGCRYLQKKLED-GDPKHRDMIFNETYGHFPELMTDPFGNYLCQKLLEYST 508
Query: 289 HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY----SKGAQRERLVAEIIANALLLAE 344
E +++ VA++ GI+ + G +Q V++ + Q L+ + N + L +
Sbjct: 509 EEQRSAIIDSVANDLVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLILALSMNVVALIK 568
Query: 345 DCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRII 404
D GN+V+Q L +P+ + + + + + +++G V++R + + Q +++
Sbjct: 569 DLNGNHVIQKCLNKLIPEDNQFIYNAIAANLIEVATHRHGCCVLQRSIDHASPAQRMQLV 628
Query: 405 IELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSSP 441
E++ N L+ PFGNYVIQ L ++ R FS P
Sbjct: 629 TEIIF--NSLYLVQDPFGNYVIQYILDLNDAR-FSEP 662
>gi|402218782|gb|EJT98857.1| ARM repeat-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 514
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 182/302 (60%), Gaps = 17/302 (5%)
Query: 141 DSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFG 200
+ F + L DL G I +L KDQ+GCR+LQ+ + E +MIF E +LM DPFG
Sbjct: 26 NRFAGTRLEDLAGEIPSLCKDQHGCRYLQKKLEEGIPEHRDMIFRETFGHFADLMTDPFG 85
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ----- 255
NY+ QKL+E ++EQR I + D LV I LN HG RAV K+++ L+ P+Q
Sbjct: 86 NYLCQKLLEFANDEQRNLICESVALD---LVGISLNMHGTRAVQKMIDYLSTPRQARVSC 142
Query: 256 -----ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
I ++ AL VTL KD NG++VIQ C+ + ED +++ N VA +C +AT +
Sbjct: 143 SSILQIHAIIIALSMNVVTLIKDLNGNHVIQKCLNRLAPEDNQFIYNAVAAHCVEVATHR 202
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GCCVLQ C++++ AQR +LV EI NAL L +D YGNYVVQ++L L + + +++RQ
Sbjct: 203 HGCCVLQRCIDHASEAQRMQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQ 262
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTR--IIIELLRSPNVSMLLMHPFGNYVIQS 428
G+ + S K+ SNV+E+C+ + E STR ++ E L + LL FGNY +Q+
Sbjct: 263 FVGNVIPLSMQKFSSNVIEKCIRVA--EPSTRKLLVEEFLSRAKLEKLLRDSFGNYCVQT 320
Query: 429 AL 430
AL
Sbjct: 321 AL 322
>gi|281204898|gb|EFA79092.1| Conserved hypothetical protein [Polysphondylium pallidum PN500]
Length = 1346
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 184/291 (63%), Gaps = 5/291 (1%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+S+ L G+I L +DQ+GCR LQ+ + + E+IF EV + + ELM DPFGNY+ Q
Sbjct: 1020 TSIEQLTGSIYPLCRDQHGCRFLQKKLEDGDEPLTEIIFKEVCEYMLELMTDPFGNYLCQ 1079
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E C++ QR I+ + D +VRI +N HG RAV K++E LT P+QI+L+ +L
Sbjct: 1080 KLLEHCNDRQRLMIIDKVGPD---IVRISMNMHGTRAVQKMIEFLTTPEQIALIKKSLAN 1136
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVAD--NCYGIATDKSGCCVLQHCVEYS 323
V L +D NG++VIQ C+ S D +++ + V+ NC +AT + GCCVLQ C++++
Sbjct: 1137 YVVPLIQDLNGNHVIQKCLNKLSPPDNQFIYDSVSSSANCIAVATHRHGCCVLQRCIDHA 1196
Query: 324 KGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+Q+ +L+ E+I+N+L+L +D +GNYVVQ++L L P + + ++ G+ + K+
Sbjct: 1197 SESQKFQLINEVISNSLVLVQDPFGNYVVQYVLDLPFPGLATEMAKRFLGNVPILATQKF 1256
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
SNVVE+CL + +I E++ + LL PF NYVIQ++L +++
Sbjct: 1257 SSNVVEKCLHVADPMTRGNLIQEIIDCDILHNLLQDPFANYVIQTSLTIAE 1307
>gi|392579559|gb|EIW72686.1| hypothetical protein TREMEDRAFT_72846 [Tremella mesenterica DSM
1558]
Length = 913
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 145/407 (35%), Positives = 216/407 (53%), Gaps = 25/407 (6%)
Query: 36 SPRLPNTSLNEKSYFDETDLSAYFSHLNVNDRIFDN--PVHHFPLVENGFFSHPCQEAEP 93
SP + + + N++ Y + DL+ F + DN P PL G F P P
Sbjct: 330 SPNMESLAQNQRGYSN-PDLARAFGRTGSGFSLQDNARPYGADPLY--GMFV-PNTAPLP 385
Query: 94 INQD---SSILNLLHNHNFDGLRSNGNELSSVPRNQWMSSLSLKRNQWLQDS----FDCS 146
+N + + N+ FD L S+ LK + D F
Sbjct: 386 LNSAIAAAFVPGAYDNYGFDDDGYGSGALYP------GGSIGLKNKRADADREFNRFAGV 439
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
+ DL+G ++ L KDQ+GCR+LQR + +MIF+E ELM DPFGNY+ QK
Sbjct: 440 RIEDLQGELLMLCKDQHGCRYLQRKLEEGDAGHRDMIFLETYGHFPELMTDPFGNYLCQK 499
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNP---QQISLVLAAL 263
L+E ++EQR+ I+ + ND LV I LN HG RAV K+++ L+ P +QI ++ AL
Sbjct: 500 LLEYSTDEQRSAIIDSVAND---LVAISLNMHGTRAVQKMVDFLSAPRQAKQIRTLIYAL 556
Query: 264 RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
V L KD NG++VIQ C+ ED +++ N +A N +AT + GCCVLQ ++++
Sbjct: 557 SMNVVALIKDLNGNHVIQKCLNKLCPEDNQFIYNAIAANLIEVATHRHGCCVLQRSIDHA 616
Query: 324 KGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
AQR +LV EII N+L L +D +GNYV+Q++L L + + L+R G+ S S K+
Sbjct: 617 SPAQRMQLVTEIIFNSLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSLSVQKF 676
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
SNVVE+C+ + E ++ E+L + LL +GNYVIQ+ L
Sbjct: 677 SSNVVEKCIRVADPEVRKSLVSEVLNRSRLEKLLRDSYGNYVIQTIL 723
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 104/217 (47%), Gaps = 8/217 (3%)
Query: 229 QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFS 288
+L+ +C + HG R + + LE + ++ L D G+Y+ Q +++ +
Sbjct: 447 ELLMLCKDQHGCRYLQRKLEE-GDAGHRDMIFLETYGHFPELMTDPFGNYLCQKLLEYST 505
Query: 289 HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEII----ANALLLAE 344
E +++ VA++ I+ + G +Q V++ ++ + + +I N + L +
Sbjct: 506 DEQRSAIIDSVANDLVAISLNMHGTRAVQKMVDFLSAPRQAKQIRTLIYALSMNVVALIK 565
Query: 345 DCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRII 404
D GN+V+Q L P+ + + + + + +++G V++R + + Q +++
Sbjct: 566 DLNGNHVIQKCLNKLCPEDNQFIYNAIAANLIEVATHRHGCCVLQRSIDHASPAQRMQLV 625
Query: 405 IELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSSP 441
E++ N L+ PFGNYVIQ L ++ R FS P
Sbjct: 626 TEIIF--NSLYLVQDPFGNYVIQYILDLNDAR-FSEP 659
>gi|15220219|ref|NP_174813.1| protein pumilio 10 [Arabidopsis thaliana]
gi|313471421|sp|Q9LP21.2|PUM10_ARATH RecName: Full=Putative pumilio homolog 10; Short=APUM-10;
Short=AtPUM10
gi|332193706|gb|AEE31827.1| protein pumilio 10 [Arabidopsis thaliana]
Length = 528
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/292 (40%), Positives = 188/292 (64%), Gaps = 3/292 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
D S+ ++ G++ +A+DQ GCR LQ+ + + ++IF+E+ID V EL +DP GNY
Sbjct: 206 LDLVSMVEIYGSVNLMARDQIGCRALQKLVEEGTVLDSKVIFLEIIDHVVELSMDPLGNY 265
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+VQKL+ + EEQRT I+ +LT+ +L++ICLNT+G R + K+++ + QQI+LV +A
Sbjct: 266 IVQKLLVVSDEEQRTMIVSVLTSKPRELIKICLNTNGTRVIQKMIKTVKTKQQIALVKSA 325
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L PG + L D+NG++V+Q C++ D K+++ + C +AT + GC VLQ +
Sbjct: 326 LEPGFLVLVNDSNGYHVLQSCLEFLVPNDNKFVVEAATEYCAQLATHQYGCYVLQCSLIN 385
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G Q ERLVAEI ++L L++D +GNYVVQ L+ +V + +LL H + + K
Sbjct: 386 TVGLQHERLVAEISRDSLRLSQDPFGNYVVQCLIDQQVSSV--NLLLPFRTHCIELATQK 443
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
+ S+V+E+CL + E ++ I+ ELL PN LL P+ NYVIQ+AL V+K
Sbjct: 444 FSSHVIEKCLRKYPESRA-EIVRELLSYPNFEQLLQDPYANYVIQTALSVTK 494
>gi|255950610|ref|XP_002566072.1| Pc22g21770 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593089|emb|CAP99465.1| Pc22g21770 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1018
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 172/288 (59%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F L +G + +L KDQ+GCR+LQR + E +++IF E V ELM DPFGNY
Sbjct: 592 FGNYPLEHYKGELYSLCKDQHGCRYLQRKLEERNPEHVQLIFSETYMHVIELMTDPFGNY 651
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQRT ++ N +LV+I LN HG RA+ K++E ++ +Q V+ A
Sbjct: 652 LCQKLLEYSNDEQRT---ALIDNAAPELVKIALNQHGTRALQKMIEFISTSKQTQTVINA 708
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L+ V L +D NG++VIQ C+ + ED +++ V NC + T + GCCVLQ C+++
Sbjct: 709 LQYHVVDLVQDLNGNHVIQKCLNRLTPEDAEFIYEAVGGNCVVVGTHRHGCCVLQRCIDH 768
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G Q+ RL+++I +++ L +D +GNYVVQ++L L P T L G+ S K
Sbjct: 769 ASGHQKARLISQITSHSFALVQDPFGNYVVQYILDLAEPSFTNPLCSTFAGNIPQLSKQK 828
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+CL + ++I E L + +L F NYV+Q+A+
Sbjct: 829 FSSNVIEKCLRTADNYMKRQMIDEFLAGNELEKMLRDSFANYVVQTAM 876
>gi|293332512|ref|NP_001169625.1| uncharacterized protein LOC100383506 [Zea mays]
gi|224030501|gb|ACN34326.1| unknown [Zea mays]
gi|414865276|tpg|DAA43833.1| TPA: hypothetical protein ZEAMMB73_925464 [Zea mays]
Length = 694
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 170/275 (61%), Gaps = 3/275 (1%)
Query: 158 LAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRT 217
+AKD+ GCR+LQ K ++ IF +I+ + +LMI GNY+VQ++VE+C E QR
Sbjct: 383 MAKDKNGCRYLQDKFLE-GKHHVDAIFEGIINHIADLMISSAGNYLVQEMVEVCDEGQRL 441
Query: 218 RILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGH 277
RI+L LT D +++ I LNTHG R V +L+E +T+ + I L+++AL+PG + L D NG
Sbjct: 442 RIILALTQDPVKMIAISLNTHGTRVVQRLIEKVTSRELIILIISALQPGFMLLVNDPNGT 501
Query: 278 YVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA 337
+VIQ C+ +F ED K++ A N + +A + GCCVLQ C+ ++G + L+ +I A
Sbjct: 502 HVIQKCLANFGAEDNKFIFEGAAANYFNMAVQRHGCCVLQKCISTARGRYQANLIVKICA 561
Query: 338 NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGE 397
+ LA+D +GNYVVQH+L ++P A L EG Y+ S K SNVV+RC+ +
Sbjct: 562 HGFELAQDIFGNYVVQHVLKQKIPYANARLASLFEGKYIYLSKQKVSSNVVQRCIEFFPD 621
Query: 398 EQSTRIIIE--LLRSPNVSMLLMHPFGNYVIQSAL 430
+ I+ E LLR + L+ P+ NYVI +AL
Sbjct: 622 DAKAVIVHEFLLLRGSHFEQLVTDPYANYVINTAL 656
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 11/133 (8%)
Query: 304 YGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALL-LAEDCYGNYVVQHLLAL---- 358
Y +A DK+GC LQ ++ +G + E I N + L GNY+VQ ++ +
Sbjct: 381 YHMAKDKNGCRYLQD--KFLEGKHHVDAIFEGIINHIADLMISSAGNYLVQEMVEVCDEG 438
Query: 359 -RVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLL 417
R+ I A L Q ++ S N +G+ VV+R + + + +II L+ P +L+
Sbjct: 439 QRLRIILA--LTQDPVKMIAISLNTHGTRVVQRLIEKVTSRELIILIISALQ-PGFMLLV 495
Query: 418 MHPFGNYVIQSAL 430
P G +VIQ L
Sbjct: 496 NDPNGTHVIQKCL 508
>gi|336364324|gb|EGN92684.1| hypothetical protein SERLA73DRAFT_190697 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378294|gb|EGO19452.1| hypothetical protein SERLADRAFT_478869 [Serpula lacrymans var.
lacrymans S7.9]
Length = 597
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/298 (41%), Positives = 180/298 (60%), Gaps = 15/298 (5%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F + L DL+G I +L KDQ+GCR+LQ+ + E +MIF E +LM DPFGNY
Sbjct: 116 FAGTRLEDLQGEIPSLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFSHFADLMTDPFGNY 175
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ------- 255
+ QKL+E ++EQR I + D LV I LN HG RAV K+++ L+ +Q
Sbjct: 176 LCQKLLEYSTDEQRNVICESVAQD---LVNISLNMHGTRAVQKMIDFLSTRRQTDVRYNT 232
Query: 256 -ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCC 314
I ++ AL V L KD NG++VIQ C+ + ED +++ N VA NC +AT + GCC
Sbjct: 233 QIHSIIVALSLHVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCC 292
Query: 315 VLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGH 374
VLQ C++++ QR +LV EI NAL L +D YGNYVVQ++L L + + +++RQ G+
Sbjct: 293 VLQRCIDHASDHQRVQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGN 352
Query: 375 YVSFSCNKYGSNVVERCLLESGEEQSTRIII--ELLRSPNVSMLLMHPFGNYVIQSAL 430
+ S K+ SNV+E+C+ + E STR I+ ELL + LL +GNY +Q+AL
Sbjct: 353 VCALSVQKFSSNVIEKCIRVA--EHSTRKILIEELLNRTRLEKLLRDSYGNYCVQTAL 408
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 6/203 (2%)
Query: 155 IVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEE 214
+V L KD G +Q+ ++ L E+ + I+ V E+ G V+Q+ ++ S+
Sbjct: 245 VVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASDH 304
Query: 215 QRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDT 274
QR +++ +T + LV+ + ++ +L L +N + V+ L+
Sbjct: 305 QRVQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFS----DAVIRQFTGNVCALSVQK 360
Query: 275 NGHYVIQYCVKHFSHEDTKYLLNEVADNCY--GIATDKSGCCVLQHCVEYSKGAQRERLV 332
VI+ C++ H K L+ E+ + + D G +Q ++Y++ AQR LV
Sbjct: 361 FSSNVIEKCIRVAEHSTRKILIEELLNRTRLEKLLRDSYGNYCVQTALDYAEPAQRALLV 420
Query: 333 AEIIANALLLAEDCYGNYVVQHL 355
I L+ YG + L
Sbjct: 421 DGIRPVLPLIRNTPYGKRIQNKL 443
>gi|340517824|gb|EGR48067.1| RNA binding protein [Trichoderma reesei QM6a]
Length = 661
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 178/291 (61%), Gaps = 6/291 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSS-LPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
L RG I L KDQYGCR+LQ+ + + ++ MI++E V ELM DPFGNY+ QK
Sbjct: 311 LESFRGQIYELCKDQYGCRYLQKKLEERVHMNQVHMIWLETNQHVIELMTDPFGNYLCQK 370
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L+ELC++++RT +++ N +VRI LN HG RA+ K++E ++ PQQ+ L++ ALR
Sbjct: 371 LLELCNDDERT---VLIQNASQDMVRIALNQHGTRALQKMIETVSTPQQVHLIIEALRYR 427
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
V L +D NG++VIQ C+ + D +++ + V + C + T + GCCVLQ C++++ G
Sbjct: 428 VVQLIQDLNGNHVIQKCLNKLTASDAQFIFDAVGEKCVEVGTHRHGCCVLQRCIDHATGD 487
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q+ L+ I +A +L +D +GNYVVQ+++ L P T ++ EG S +K+ SN
Sbjct: 488 QKLWLIQCITKDARILVQDPFGNYVVQYIIDLHEPTFTEPIVASFEGCISMLSRHKFSSN 547
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
V+E+CL + I+ ELL ++ L F NYV+Q+AL S +L
Sbjct: 548 VIEKCLRCAQPPSKDMIVSELLG--DIEGCLQDSFANYVVQTALDFSTPQL 596
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 103/226 (45%), Gaps = 3/226 (1%)
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
V+Q +L SE + L + Q+ +C + +G R + K LE + Q+ ++
Sbjct: 291 VIQHRRQLDSEAMSRYQNMPLESFRGQIYELCKDQYGCRYLQKKLEERVHMNQVHMIWLE 350
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
+ L D G+Y+ Q ++ + ++ L+ + + IA ++ G LQ +E
Sbjct: 351 TNQHVIELMTDPFGNYLCQKLLELCNDDERTVLIQNASQDMVRIALNQHGTRALQKMIET 410
Query: 323 SKGAQRERLVAEIIANALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
Q+ L+ E + ++ L +D GN+V+Q L + + V +
Sbjct: 411 VSTPQQVHLIIEALRYRVVQLIQDLNGNHVIQKCLNKLTASDAQFIFDAVGEKCVEVGTH 470
Query: 382 KYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQ 427
++G V++RC+ + +Q +I + + + +L+ PFGNYV+Q
Sbjct: 471 RHGCCVLQRCIDHATGDQKLWLIQCITK--DARILVQDPFGNYVVQ 514
>gi|353234716|emb|CCA66738.1| related to Drosophila pumilio protein and Mpt5p protein
[Piriformospora indica DSM 11827]
Length = 980
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 173/288 (60%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
+ S L DL G I + KDQ+GCR LQ+ + E ++IF E ELM DPFGNY
Sbjct: 514 YASSRLEDLIGEIPLMCKDQHGCRFLQKKLEEGVPEHRDIIFRETFKHFAELMTDPFGNY 573
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQR I + D LV I LN HG RAV K+++ L+ +QI ++ A
Sbjct: 574 LCQKLLEYSTDEQRNLICESVAGD---LVTISLNMHGTRAVQKMIDFLSTQRQIVAIIRA 630
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L VTL KD NG++VIQ C+ ED +++ N VA +C +AT + GCCVLQ C+++
Sbjct: 631 LSLHVVTLIKDLNGNHVIQKCLNRLVPEDNQFIYNAVATHCVEVATHRHGCCVLQRCIDH 690
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ QR +LV EI +AL L +D YGNYVVQ++L L + + +++RQ G+ + S K
Sbjct: 691 ASETQRLQLVTEITYHALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFFGNVCALSVQK 750
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+C+ + +I ELL + LL FGNY +Q+AL
Sbjct: 751 FSSNVIEKCIRVAEHNTRKLLIEELLNRSRLEKLLRDSFGNYCVQTAL 798
>gi|302698595|ref|XP_003038976.1| hypothetical protein SCHCODRAFT_65128 [Schizophyllum commune H4-8]
gi|300112673|gb|EFJ04074.1| hypothetical protein SCHCODRAFT_65128 [Schizophyllum commune H4-8]
Length = 480
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 122/299 (40%), Positives = 177/299 (59%), Gaps = 12/299 (4%)
Query: 141 DSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFG 200
+ F + L DL+G I AL KDQ+GCR+LQ+ + E +MIF E +LM DPFG
Sbjct: 23 NRFAGTRLEDLQGEIPALCKDQHGCRYLQKKLEEGLPEHRDMIFRETFGHFADLMTDPFG 82
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLT--------- 251
NY+ QKL+E ++EQR I + +LV I LN HG RAV K+++ L+
Sbjct: 83 NYLCQKLLEYSTDEQRNIICESVAQ---ELVNISLNMHGTRAVQKMIDFLSTRRQTDGRY 139
Query: 252 NPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKS 311
N QI ++ AL V L KD NG++VIQ C+ + ED +++ N VA NC +AT +
Sbjct: 140 NNHQIHSIILALSMHVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRH 199
Query: 312 GCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQL 371
GCCVLQ C++++ QR +LV EI NAL L +D YGNYVVQ++L L + + +++RQ
Sbjct: 200 GCCVLQRCIDHASDHQRIQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQF 259
Query: 372 EGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
G+ + S K+ SNV+E+C+ + +I ELL + LL +GNY +Q+AL
Sbjct: 260 AGNVCALSVQKFSSNVIEKCIRVAEHNTRKMLIDELLNRTRLEKLLRDSYGNYCVQTAL 318
>gi|403414617|emb|CCM01317.1| predicted protein [Fibroporia radiculosa]
Length = 1053
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 142/383 (37%), Positives = 209/383 (54%), Gaps = 36/383 (9%)
Query: 79 VENGFFSHPCQEAEPINQDSSILNLLHNHNFD--GLRSNGNELSSVPRNQWMSSLSLKRN 136
++NG ++ EA+ Q + L++H+ GL NG + + + KR
Sbjct: 511 LDNGRYNSYGFEAKGRPQGGTGSTALYHHHGSRYGLGMNGRAHGADSKMGGLHGPKHKRG 570
Query: 137 QWLQD--SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCEL 194
++ F + L DL+G I +L KDQ+GCR+LQ+ + E +MIF E +L
Sbjct: 571 DVDREFNRFAGTRLEDLQGEIPSLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFSHFADL 630
Query: 195 MIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQ 254
M DPFGNY+ QKL+E +++QR I + D LV I LN HG RAV K+++ L+ +
Sbjct: 631 MTDPFGNYLCQKLLEYSTDDQRNVICESVAQD---LVNISLNMHGTRAVQKMIDFLSTRR 687
Query: 255 QISLVLA-----ALRPG--------------------AVTLTKDTNGHYVIQYCVKHFSH 289
Q SLV A A R G V L KD NG++VIQ C+ +
Sbjct: 688 QASLVPARFHYIAYRDGQTDLKYNAQIHSIILALSLHVVVLIKDLNGNHVIQKCLNKLAP 747
Query: 290 EDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGN 349
ED +++ N VA NC +AT + GCCVLQ CV+++ QR +LV EI NAL L +D YGN
Sbjct: 748 EDNQFIYNAVAANCVEVATHRHGCCVLQRCVDHASDIQRVQLVNEITYNALTLVQDPYGN 807
Query: 350 YVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTR--IIIEL 407
YVVQ++L L + + +++RQ G+ + S K+ SNV+E+C+ + E STR +I EL
Sbjct: 808 YVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFSSNVIEKCVRVA--EHSTRKMLIGEL 865
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
L + LL +GNY +Q+AL
Sbjct: 866 LNRTRLEKLLRDSYGNYCVQTAL 888
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 6/195 (3%)
Query: 179 EIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH 238
+I I + + V L+ D GN+V+QK + + E I + + V + + H
Sbjct: 713 QIHSIILALSLHVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAAN---CVEVATHRH 769
Query: 239 GIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNE 298
G + + +++ ++ Q++ LV + A+TL +D G+YV+QY + + + ++ +
Sbjct: 770 GCCVLQRCVDHASDIQRVQLV-NEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQ 828
Query: 299 VADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALL--LAEDCYGNYVVQHLL 356
N ++ K V++ CV ++ + R+ L+ E++ L L D YGNY VQ L
Sbjct: 829 FTGNVCALSVQKFSSNVIEKCVRVAEHSTRKMLIGELLNRTRLEKLLRDSYGNYCVQTAL 888
Query: 357 ALRVPQITASLLRQL 371
P A L+ +
Sbjct: 889 DYAEPSQRALLVEGI 903
>gi|302505595|ref|XP_003014504.1| RNA-binding protein, putative [Arthroderma benhamiae CBS 112371]
gi|291178325|gb|EFE34115.1| RNA-binding protein, putative [Arthroderma benhamiae CBS 112371]
Length = 1094
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 168/288 (58%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F L + G I + KDQ+GCR+LQR + E +++IF E V ELM DPFGNY
Sbjct: 661 FGNVPLENYSGEIYGMCKDQHGCRYLQRKLEEGVPEHVQIIFRETQMHVVELMTDPFGNY 720
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQRT ++ + LV+I LN HG RA+ K++E ++ P+QI V+ A
Sbjct: 721 LCQKLLEFTNDEQRTGLINIAAP---HLVQIALNQHGTRALQKMIEFISTPEQIQTVIHA 777
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L V L +D NG++VIQ C+ S D +++ + V C + T + GCCVLQ C+++
Sbjct: 778 LSGQVVELVQDLNGNHVIQKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCIDH 837
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G QR +L+ +I ++ L +D +GNYV+Q++L L P T L +G + S K
Sbjct: 838 ASGDQRAKLIEQITKSSYSLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSKQK 897
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+C+ S I E+L + +L F NYVIQ+A+
Sbjct: 898 FSSNVIEKCIRTSDFNMRRAFIKEMLSPHELPNMLRDSFANYVIQTAM 945
>gi|327300785|ref|XP_003235085.1| pumilio-family RNA binding protein [Trichophyton rubrum CBS 118892]
gi|326462437|gb|EGD87890.1| pumilio-family RNA binding protein [Trichophyton rubrum CBS 118892]
Length = 1049
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 168/288 (58%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F L + G I + KDQ+GCR+LQR + E +++IF E V ELM DPFGNY
Sbjct: 616 FGNVPLENYSGEIYGMCKDQHGCRYLQRKLEEGVPEHVQIIFRETQMHVVELMTDPFGNY 675
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQRT ++ + LV+I LN HG RA+ K++E ++ P+QI V+ A
Sbjct: 676 LCQKLLEFTNDEQRTGLINIAAP---HLVQIALNQHGTRALQKMIEFISTPEQIQTVIHA 732
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L V L +D NG++VIQ C+ S D +++ + V C + T + GCCVLQ C+++
Sbjct: 733 LSGQVVELVQDLNGNHVIQKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCIDH 792
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G QR +L+ +I ++ L +D +GNYV+Q++L L P T L +G + S K
Sbjct: 793 ASGDQRAKLIEQITKSSYSLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSKQK 852
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+C+ S I E+L + +L F NYVIQ+A+
Sbjct: 853 FSSNVIEKCIRTSDFNMRRAFIKEMLSPHELPNMLRDSFANYVIQTAM 900
>gi|326468643|gb|EGD92652.1| RNA-binding protein [Trichophyton tonsurans CBS 112818]
Length = 1049
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 168/288 (58%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F L + G I + KDQ+GCR+LQR + E +++IF E V ELM DPFGNY
Sbjct: 616 FGNVPLENYSGEIYGMCKDQHGCRYLQRKLEEGVPEHVQIIFRETQIHVVELMTDPFGNY 675
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQRT ++ + LV+I LN HG RA+ K++E ++ P+QI V+ A
Sbjct: 676 LCQKLLEFTNDEQRTGLINIAAP---HLVQIALNQHGTRALQKMIEFISTPEQIQTVIHA 732
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L V L +D NG++VIQ C+ S D +++ + V C + T + GCCVLQ C+++
Sbjct: 733 LSGQVVELVQDLNGNHVIQKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCIDH 792
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G QR +L+ +I ++ L +D +GNYV+Q++L L P T L +G + S K
Sbjct: 793 ASGDQRAKLIEQITKSSYSLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSKQK 852
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+C+ S I E+L + +L F NYVIQ+A+
Sbjct: 853 FSSNVIEKCIRTSDFNMRRAFIKEMLSPHELPNMLRDSFANYVIQTAM 900
>gi|326479871|gb|EGE03881.1| RNA-binding protein [Trichophyton equinum CBS 127.97]
Length = 1049
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 168/288 (58%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F L + G I + KDQ+GCR+LQR + E +++IF E V ELM DPFGNY
Sbjct: 616 FGNVPLENYSGEIYGMCKDQHGCRYLQRKLEEGVPEHVQIIFRETQIHVVELMTDPFGNY 675
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQRT ++ + LV+I LN HG RA+ K++E ++ P+QI V+ A
Sbjct: 676 LCQKLLEFTNDEQRTGLINIAAP---HLVQIALNQHGTRALQKMIEFISTPEQIQTVIHA 732
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L V L +D NG++VIQ C+ S D +++ + V C + T + GCCVLQ C+++
Sbjct: 733 LSGQVVELVQDLNGNHVIQKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCIDH 792
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G QR +L+ +I ++ L +D +GNYV+Q++L L P T L +G + S K
Sbjct: 793 ASGDQRAKLIEQITKSSYSLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSKQK 852
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+C+ S I E+L + +L F NYVIQ+A+
Sbjct: 853 FSSNVIEKCIRTSDFNMRRAFIKEMLSPHELPNMLRDSFANYVIQTAM 900
>gi|395326054|gb|EJF58468.1| ARM repeat-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 978
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 177/297 (59%), Gaps = 14/297 (4%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F + L DL G I L KDQ+GCR+LQ+ + E +MIF E +LM DPFGNY
Sbjct: 517 FAGTRLEDLVGEIPQLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFGHFADLMTDPFGNY 576
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISL---- 258
+ QKL+E ++EQR I + D LV I LN HG RAV K+++ L+ +Q L
Sbjct: 577 LCQKLLEYSTDEQRNVICESVAQD---LVNISLNMHGTRAVQKMIDFLSTRRQTDLGDVQ 633
Query: 259 ---VLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCV 315
++ AL V L KD NG++VIQ C+ + ED +++ N VA NC +AT + GCCV
Sbjct: 634 IHSIILALSLHVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCV 693
Query: 316 LQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHY 375
LQ C++++ QR +LV EI NAL L +D YGNYVVQ++L L + + ++RQ G+
Sbjct: 694 LQRCIDHASEHQRVQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDGVIRQFAGNV 753
Query: 376 VSFSCNKYGSNVVERCLLESGEEQSTR--IIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ S K+ SNV+E+C+ + E STR +I ELL + LL +GNY +Q+AL
Sbjct: 754 CALSVQKFSSNVIEKCIRVA--EHSTRKMLIGELLNRTRLEKLLRDSYGNYCVQTAL 808
>gi|302657003|ref|XP_003020235.1| RNA-binding protein, putative [Trichophyton verrucosum HKI 0517]
gi|291184046|gb|EFE39617.1| RNA-binding protein, putative [Trichophyton verrucosum HKI 0517]
Length = 927
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 168/288 (58%), Gaps = 3/288 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F L + G I + KDQ+GCR+LQR + E +++IF E V ELM DPFGNY
Sbjct: 494 FGNVPLENYSGEIYGMCKDQHGCRYLQRKLEEGVPEHVQIIFRETQMHVVELMTDPFGNY 553
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQRT ++ + LV+I LN HG RA+ K++E ++ P+QI V+ A
Sbjct: 554 LCQKLLEFTNDEQRTGLINIAAP---HLVQIALNQHGTRALQKMIEFISTPEQIQTVIHA 610
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L V L +D NG++VIQ C+ S D +++ + V C + T + GCCVLQ C+++
Sbjct: 611 LSGQVVELVQDLNGNHVIQKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCIDH 670
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G QR +L+ +I ++ L +D +GNYV+Q++L L P T L +G + S K
Sbjct: 671 ASGDQRAKLIEQITKSSYSLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSKQK 730
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+C+ S I E+L + +L F NYVIQ+A+
Sbjct: 731 FSSNVIEKCIRTSDFNMRRAFIKEMLSPHELPNMLRDSFANYVIQTAM 778
>gi|407917960|gb|EKG11259.1| hypothetical protein MPH_11603 [Macrophomina phaseolina MS6]
Length = 1088
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 174/288 (60%), Gaps = 7/288 (2%)
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSE 213
+IV L KDQ+GCR+LQ+ + + + IF D V +LM DPF NY+ QK+ E C++
Sbjct: 668 DIVELCKDQHGCRYLQKQIEGRNLDIVRKIFEATKDHVVDLMQDPFANYLCQKMYEFCND 727
Query: 214 EQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKD 273
EQRT ++ N Q+V+I LN HG RA+ K++E ++ +QI++++ ALR VTL +D
Sbjct: 728 EQRT---ALVHNAAPQMVKIALNQHGTRALQKMIEYVSTAEQINIIIEALRHNVVTLIQD 784
Query: 274 TNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVA 333
NG++VIQ C+ H +D++++ V C + T + GCCVLQ C++++ G QR L+
Sbjct: 785 LNGNHVIQKCLNHLGSKDSQFIFEAVGAACIVVGTHRHGCCVLQRCIDHASGDQRIALIG 844
Query: 334 EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLL 393
I ANA L +D +GNYVVQ++L L+ Q T + G+ S K+ SNVVE+C+
Sbjct: 845 AITANAYSLVQDPFGNYVVQYILDLQEEQFTIPMCNAFRGNVPMLSKQKFSSNVVEKCIR 904
Query: 394 ESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL----LVSKVRL 437
S E +I ELL + L+ + NYV+Q++L +K+RL
Sbjct: 905 VSNAETRRNLIEELLIPGELEKLIRDSYANYVVQTSLDYADAPTKIRL 952
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 109/240 (45%), Gaps = 9/240 (3%)
Query: 155 IVALAKDQYGCRHLQRTMSSLP-KEEIEMIFVEVIDRVCELMIDPFGNYVVQK-LVELCS 212
+V +A +Q+G R LQ+ + + E+I +I + V L+ D GN+V+QK L L S
Sbjct: 741 MVKIALNQHGTRALQKMIEYVSTAEQINIIIEALRHNVVTLIQDLNGNHVIQKCLNHLGS 800
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
++ + + + + + HG + + +++ + Q+I+L+ A+ A +L +
Sbjct: 801 KDSQ----FIFEAVGAACIVVGTHRHGCCVLQRCIDHASGDQRIALI-GAITANAYSLVQ 855
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D G+YV+QY + + T + N N ++ K V++ C+ S R L+
Sbjct: 856 DPFGNYVVQYILDLQEEQFTIPMCNAFRGNVPMLSKQKFSSNVVEKCIRVSNAETRRNLI 915
Query: 333 AEIIANALL--LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
E++ L L D Y NYVVQ L L+ + + YG ++ +
Sbjct: 916 EELLIPGELEKLIRDSYANYVVQTSLDYADAPTKIRLVEAIRPMLSAIRTTPYGRRIMSK 975
>gi|392571884|gb|EIW65056.1| ARM repeat-containing protein [Trametes versicolor FP-101664 SS1]
Length = 992
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 174/296 (58%), Gaps = 11/296 (3%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F + L DL G I L KDQ+GCR+LQ+ + E +MIF E +LM DPFGNY
Sbjct: 524 FAGTRLEDLVGEIPQLCKDQHGCRYLQKKLEEGVPEHRDMIFRETFSHFADLMTDPFGNY 583
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISL---- 258
+ QKL+E ++EQR I + D LV I LN HG RAV K+++ L+ +Q L
Sbjct: 584 LCQKLLEYSTDEQRNVICESVAQD---LVNISLNMHGTRAVQKMIDFLSTRRQTDLRCNG 640
Query: 259 ----VLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCC 314
++ AL V L KD NG++VIQ C+ + ED +++ N VA NC +AT + GCC
Sbjct: 641 QIHSIILALSLHVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCC 700
Query: 315 VLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGH 374
VLQ C++++ QR +LV EI NAL L +D YGNYVVQ++L L + + +++RQ G+
Sbjct: 701 VLQRCIDHASEHQRVQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGN 760
Query: 375 YVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ S K+ SNV+E+C+ + +I ELL + LL +GNY +Q+AL
Sbjct: 761 VCALSVQKFSSNVIEKCVRVAEHNTRKMLIGELLNRTRLEKLLRDSYGNYCVQTAL 816
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 105/229 (45%), Gaps = 15/229 (6%)
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKE---------EIEMIFVEVIDRVCELMIDPFGNYVV 204
++V ++ + +G R +Q+ + L +I I + + V L+ D GN+V+
Sbjct: 607 DLVNISLNMHGTRAVQKMIDFLSTRRQTDLRCNGQIHSIILALSLHVVVLIKDLNGNHVI 666
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK + + E I + + V + + HG + + +++ + Q++ LV +
Sbjct: 667 QKCLNKLAPEDNQFIYNAVAAN---CVEVATHRHGCCVLQRCIDHASEHQRVQLV-NEIT 722
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
A+TL +D G+YV+QY + + + ++ + N ++ K V++ CV ++
Sbjct: 723 YNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFSSNVIEKCVRVAE 782
Query: 325 GAQRERLVAEIIANALL--LAEDCYGNYVVQHLLALRVPQITASLLRQL 371
R+ L+ E++ L L D YGNY VQ L P A L+ +
Sbjct: 783 HNTRKMLIGELLNRTRLEKLLRDSYGNYCVQTALDYAEPAQRALLVEGI 831
>gi|389742126|gb|EIM83313.1| ARM repeat-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 1029
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/296 (40%), Positives = 175/296 (59%), Gaps = 11/296 (3%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F + L DL G I +L KDQ+GCR+LQ+ + + +MIF E +LM DPFGNY
Sbjct: 561 FAGTRLEDLAGEIPSLCKDQHGCRYLQKKLEEGVPDHRDMIFRETFGHFADLMTDPFGNY 620
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ------- 255
+ QKL+E ++EQR I + D LV I LN HG RAV K+++ L+ +Q
Sbjct: 621 LCQKLLEYSTDEQRNIICESVATD---LVNISLNMHGTRAVQKMIDFLSTRRQTDHRYHG 677
Query: 256 -ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCC 314
I ++ AL V L KD NG++VIQ C+ + ED +++ N VA NC +AT + GCC
Sbjct: 678 QIHSIIVALSLHVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCC 737
Query: 315 VLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGH 374
VLQ C++++ QR +LV EI NAL L +D YGNYVVQ++L L + + +++RQ G+
Sbjct: 738 VLQRCIDHASDHQRIQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGN 797
Query: 375 YVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ S K+ SNV+E+C+ + +I ELL + LL +GNY +Q+AL
Sbjct: 798 VCALSVQKFSSNVIEKCIRVAEHGTRKMLIDELLNRTRLEKLLRDSYGNYCVQTAL 853
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 105/226 (46%), Gaps = 15/226 (6%)
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKE---------EIEMIFVEVIDRVCELMIDPFGNYVV 204
++V ++ + +G R +Q+ + L +I I V + V L+ D GN+V+
Sbjct: 644 DLVNISLNMHGTRAVQKMIDFLSTRRQTDHRYHGQIHSIIVALSLHVVVLIKDLNGNHVI 703
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK + + E I + + V + + HG + + +++ ++ Q+I LV +
Sbjct: 704 QKCLNKLAPEDNQFIYNAVAAN---CVEVATHRHGCCVLQRCIDHASDHQRIQLV-NEIT 759
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
A+TL +D G+YV+QY + + + ++ + N ++ K V++ C+ ++
Sbjct: 760 YNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFSSNVIEKCIRVAE 819
Query: 325 GAQRERLVAEIIANALL--LAEDCYGNYVVQHLLALRVPQITASLL 368
R+ L+ E++ L L D YGNY VQ L P A L+
Sbjct: 820 HGTRKMLIDELLNRTRLEKLLRDSYGNYCVQTALDYAEPAQRALLV 865
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 89/203 (43%), Gaps = 6/203 (2%)
Query: 155 IVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEE 214
+V L KD G +Q+ ++ L E+ + I+ V E+ G V+Q+ ++ S+
Sbjct: 690 VVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASDH 749
Query: 215 QRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDT 274
QR +++ +T + LV+ + ++ +L L +N + V+ L+
Sbjct: 750 QRIQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFS----DAVIRQFTGNVCALSVQK 805
Query: 275 NGHYVIQYCVKHFSHEDTKYLLNEVADNCY--GIATDKSGCCVLQHCVEYSKGAQRERLV 332
VI+ C++ H K L++E+ + + D G +Q ++Y++ AQR LV
Sbjct: 806 FSSNVIEKCIRVAEHGTRKMLIDELLNRTRLEKLLRDSYGNYCVQTALDYAEPAQRALLV 865
Query: 333 AEIIANALLLAEDCYGNYVVQHL 355
I L+ YG + L
Sbjct: 866 DGIRPVLPLIRNTPYGKRIQNKL 888
>gi|429329361|gb|AFZ81120.1| pumilio-family RNA binding repeat domain-containing protein
[Babesia equi]
Length = 798
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/299 (40%), Positives = 176/299 (58%), Gaps = 8/299 (2%)
Query: 138 WLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMID 197
W++DSF + GN++ +A+DQ GCR LQR + + I I EVID + LM D
Sbjct: 315 WIKDSF---FNYQVLGNVLTIAQDQTGCRMLQRQLEYNDENFIASILDEVIDHLVVLMTD 371
Query: 198 PFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQIS 257
PFGNY+ QKL+ +CS EQ RI+ + D + ICLN HG RA+ KL+E +T P+ IS
Sbjct: 372 PFGNYLCQKLMTVCSSEQLGRIIKGVEKD---FLSICLNMHGTRAIQKLIEVVTEPEHIS 428
Query: 258 LVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQ 317
V + L V L D NG++VIQ C+ ED +++ + DNC +AT + GCCV+Q
Sbjct: 429 FVTSVLSTAVVDLVNDLNGNHVIQKCLISLKSEDCEFIYKAMNDNCVYLATHRHGCCVMQ 488
Query: 318 HCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVS 377
C++ + QR L+ I + L L ED +GNYV+Q++L L+ +I ++ L +
Sbjct: 489 RCIDAANPQQRNMLIDTISSKTLDLVEDAFGNYVIQYVLRLKDDEINRRIVVALADNVTE 548
Query: 378 FSCNKYGSNVVERCLLESGEEQSTRIIIELLRSP--NVSMLLMHPFGNYVIQSALLVSK 434
F+ K+ SNVVERCL+ E + +I + L P + L++ PFGNYVIQ L V++
Sbjct: 549 FAKQKFSSNVVERCLIFCPLEVRSILISKFLNVPFDVLKELILDPFGNYVIQRVLNVAQ 607
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMI---FVEV-IDRVCELMIDPFGNYVVQK 206
L N+ AK ++ ++R + P E ++ F+ V D + EL++DPFGNYV+Q+
Sbjct: 542 LADNVTEFAKQKFSSNVVERCLIFCPLEVRSILISKFLNVPFDVLKELILDPFGNYVIQR 601
Query: 207 LVELCSEEQRTRIL 220
++ + ++ + +L
Sbjct: 602 VLNVAQSDELSALL 615
>gi|15236527|ref|NP_192596.1| pumilio 15 [Arabidopsis thaliana]
gi|75100238|sp|O81465.1|PUM15_ARATH RecName: Full=Pumilio homolog 15; Short=APUM-15; Short=AtPUM15
gi|3377818|gb|AAC28191.1| contains similarity to drosophila pumilio protein (GB:S22026)
[Arabidopsis thaliana]
gi|7267498|emb|CAB77981.1| putative self-incompatability RNA-binding protein [Arabidopsis
thaliana]
gi|332657258|gb|AEE82658.1| pumilio 15 [Arabidopsis thaliana]
Length = 477
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/296 (41%), Positives = 189/296 (63%), Gaps = 13/296 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+R +++ AKD LQ ++ KE I+ IF +I VCELM+D +G+ V +KL+E
Sbjct: 151 IRNTLLSRAKDGIESHMLQYVIAKGLKETIDKIFDNLISHVCELMLDYYGHKVFRKLMEK 210
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
C++EQ TR+L ++ + F+ VR+C++THG A+ L+ +L + +QIS + L ++ L
Sbjct: 211 CTDEQITRVLDIVLEEPFEFVRLCVHTHGTHAIQGLMRSLCSEEQISRFMETLCYVSLLL 270
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
TKD H VI +C FS T+YLL + NCY +A D++GCC+L+ + S R+
Sbjct: 271 TKDVIAHRVILFCFNQFSPSHTRYLLEVIVQNCYQVAIDQNGCCMLKKLIRQSSRELRDP 330
Query: 331 LVAEIIANALLLAEDCYG----------NYVVQHLLALRVPQITASLLRQLEGHYVSFSC 380
L+ EII+ A+ L +CYG NYVVQ+LL L+ ++T++L + L+G+YV S
Sbjct: 331 LIKEIISIAVRLCGNCYGTLTPKSLLVRNYVVQYLLRLKDYEVTSALSKHLDGNYVQLSY 390
Query: 381 NKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVR 436
+KYGS+VV++C LES E S RII ELL ++ LL+ P+G+YVIQ+A +VS+VR
Sbjct: 391 DKYGSHVVQKC-LESREFSSRRIIAELL--SDIDSLLVDPYGDYVIQTAWIVSEVR 443
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+ L GN V L+ D+YG +Q+ + S I E++ + L++DP+G+YV+Q
Sbjct: 379 KHLDGNYVQLSYDKYGSHVVQKCLESREFSS-RRIIAELLSDIDSLLVDPYGDYVIQ 434
>gi|293333240|ref|NP_001169187.1| hypothetical protein [Zea mays]
gi|223975405|gb|ACN31890.1| unknown [Zea mays]
gi|413925374|gb|AFW65306.1| hypothetical protein ZEAMMB73_251972 [Zea mays]
Length = 754
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 148/462 (32%), Positives = 240/462 (51%), Gaps = 41/462 (8%)
Query: 7 NRHLRDETTRFGSPSRGLPAAHFRRP-------------------RQESPRLPNT---SL 44
+RH +E P++G +++ P R+ S L NT S
Sbjct: 249 SRHRSNEQAAVYPPAKGPSSSYIGTPNFHWLENGYSYLNGAASQKRRNSGGLNNTFADSF 308
Query: 45 NEKSYFDETDLSAYFSHLNVNDRIFDNPVHHFPLVENGFFSHPCQEAEPINQDSSI---- 100
SY + S F H +++F++ H +N SHP +Q S I
Sbjct: 309 PSTSYTGSSCGSGDFHHFQWAEKVFNSYGPHHQQGDN--LSHPYGLGLSHHQRSDIAHPY 366
Query: 101 -LNLLHNHNFDGL---------RSNGNELSSVPRNQWMSSLSLKRNQWLQDSFDC-SSLR 149
L H+ D L R + +SV S L + +L D S+
Sbjct: 367 GLGFSHHQRSDKLNTASYVERIRMRPDVGNSVNFFDLSSYARLLNSPFLSSQSDTYKSID 426
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
++ G + L+KDQ CR LQ+ +S +E+I+ IF E+ID V +LM+DP +Y+VQK++E
Sbjct: 427 EVMGRVCMLSKDQDACRFLQKLLSEGTQEDIDKIFGEIIDNVGDLMVDPTAHYLVQKILE 486
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
C+ +QRT ++ +T +L + N HG R V K+++ + P Q+S++++AL G +
Sbjct: 487 ECTNDQRTHMIREITKAPIKLHKASCNVHGTRVVQKVIDTMNTPDQVSMLVSALNTGMMC 546
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY-GIATDKSGCCVLQHCVEYSKGAQR 328
L D+ G++V+ +C++ E ++L E A +CY +A D+ GCCVLQ C+ +S QR
Sbjct: 547 LMTDSYGNHVVDHCLQKLLPEHKAFIL-EAAASCYLQLARDRHGCCVLQKCIGHSSDEQR 605
Query: 329 ERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
L+ +I ++AL L+ED YGNYV+Q +L L + IT ++ +L GH+ + S K GS+VV
Sbjct: 606 NNLLCKITSSALTLSEDPYGNYVIQFILDLNIEWITVRVVDELAGHFGNLSMQKCGSHVV 665
Query: 389 ERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
E CL + RII EL+ P + +++ +GN+VIQ+AL
Sbjct: 666 EHCLKLAPRLICDRIINELMHDPKLLDIILDQYGNFVIQTAL 707
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 119/235 (50%), Gaps = 7/235 (2%)
Query: 163 YGCRHLQRTMSSL-PKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILL 221
+G R +Q+ + ++ +++ M+ + + LM D +GN+VV ++ E + IL
Sbjct: 515 HGTRVVQKVIDTMNTPDQVSMLVSALNTGMMCLMTDSYGNHVVDHCLQKLLPEHKAFILE 574
Query: 222 MLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQ 281
+ QL R + HG + K + + ++ Q+ +L L + A+TL++D G+YVIQ
Sbjct: 575 AAASCYLQLAR---DRHGCCVLQKCIGHSSDEQRNNL-LCKITSSALTLSEDPYGNYVIQ 630
Query: 282 YCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALL 341
+ + T +++E+A + ++ K G V++HC++ + +R++ E++ + L
Sbjct: 631 FILDLNIEWITVRVVDELAGHFGNLSMQKCGSHVVEHCLKLAPRLICDRIINELMHDPKL 690
Query: 342 L--AEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLE 394
L D YGN+V+Q L + A+ + ++ H N YG V+ R L+
Sbjct: 691 LDIILDQYGNFVIQTALKQCQGEHHAAFVETIKPHTAVMQSNMYGKKVLSRICLK 745
>gi|320591503|gb|EFX03942.1| RNA-binding protein [Grosmannia clavigera kw1407]
Length = 1112
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/302 (38%), Positives = 181/302 (59%), Gaps = 7/302 (2%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
++ + L + G I L KDQ+GCR+LQ+ + + E++ MI++E V ELM DPFGNY
Sbjct: 646 YNNTPLEAVGGTIYELCKDQHGCRYLQKQLENRNPEQVHMIWLETNQHVVELMTDPFGNY 705
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E C++++RT +++ N +VRI LN HG RA+ K++E ++ Q+ +++ A
Sbjct: 706 LCQKLLEYCNDDERT---VLIQNAAQDMVRIALNQHGTRALQKMIEFISTEAQVQIIIEA 762
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L KD NG++VIQ C+ + + +++ + V C + T + GCCVLQ C+++
Sbjct: 763 LRHCVVDLIKDLNGNHVIQKCLNKLTPANAQFIFDAVGGACVEVGTHRHGCCVLQRCIDH 822
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G Q+ L+ I A+ L +D YGNYVVQ+++ L T L+ + G S S +K
Sbjct: 823 ASGDQKVWLIQRITEEAVTLIQDPYGNYVVQYIIDLNDLNFTEPLVARFRGRICSLSRHK 882
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVS----KVRLF 438
+ SNVVE+CL S E I+ E+L S V L+ + NYV+Q+AL + K RL
Sbjct: 883 FSSNVVEKCLRCSLEPSRDMIVEEVLNSGEVERLVRDSYANYVVQTALEYATPYMKARLV 942
Query: 439 SS 440
S
Sbjct: 943 DS 944
>gi|406699075|gb|EKD02294.1| RNA-binding protein of the pumilio family [Trichosporon asahii var.
asahii CBS 8904]
Length = 943
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/308 (40%), Positives = 184/308 (59%), Gaps = 12/308 (3%)
Query: 128 MSSLSLKRNQWLQD--SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFV 185
M L KR + ++ F L DL+G I++L KDQ+GCR+LQ+ + +MIF
Sbjct: 405 MMGLKTKRAEADREFNRFSGMRLEDLQGEILSLCKDQHGCRYLQKKLEEGDPAHRDMIFR 464
Query: 186 EVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLK 245
E ELMIDPFGNY+ QKL+E +EEQR+ I+ ++ND LV I LN HG RAV K
Sbjct: 465 ETYGHFPELMIDPFGNYLCQKLLEHATEEQRSAIIDSVSND---LVGISLNMHGTRAVQK 521
Query: 246 LLENLTNP---QQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADN 302
+++ L P +QI ++ AL V L KD NG++VIQ C+ ED +++ N +A N
Sbjct: 522 MVDFLAQPRQPKQIRTLIYALSVNVVALIKDLNGNHVIQKCLNKLIPEDNQFIYNAIATN 581
Query: 303 CYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ 362
+AT + GCCVLQ ++++ AQR +LV EII N+L L +D +GNYV+Q++L L +
Sbjct: 582 LIEVATHRHGCCVLQRSIDHASPAQRLQLVTEIIFNSLYLVQDPFGNYVIQYILDLNDAR 641
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFG 422
+ L+R G+ C+ + SNVVE+C+ + E ++ E+L + LL +G
Sbjct: 642 FSEPLIRTFIGNV----CSLFSSNVVEKCIRVADPEIRKVLVAEVLNRSRLEKLLRDSYG 697
Query: 423 NYVIQSAL 430
NYVIQ+ L
Sbjct: 698 NYVIQTIL 705
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 106/217 (48%), Gaps = 8/217 (3%)
Query: 229 QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFS 288
+++ +C + HG R + K LE +P ++ L D G+Y+ Q ++H +
Sbjct: 433 EILSLCKDQHGCRYLQKKLEE-GDPAHRDMIFRETYGHFPELMIDPFGNYLCQKLLEHAT 491
Query: 289 HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY----SKGAQRERLVAEIIANALLLAE 344
E +++ V+++ GI+ + G +Q V++ + Q L+ + N + L +
Sbjct: 492 EEQRSAIIDSVSNDLVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLIYALSVNVVALIK 551
Query: 345 DCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRII 404
D GN+V+Q L +P+ + + + + + +++G V++R + + Q +++
Sbjct: 552 DLNGNHVIQKCLNKLIPEDNQFIYNAIATNLIEVATHRHGCCVLQRSIDHASPAQRLQLV 611
Query: 405 IELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSSP 441
E++ N L+ PFGNYVIQ L ++ R FS P
Sbjct: 612 TEIIF--NSLYLVQDPFGNYVIQYILDLNDAR-FSEP 645
>gi|401889099|gb|EJT53039.1| hypothetical protein A1Q1_00046 [Trichosporon asahii var. asahii
CBS 2479]
Length = 943
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/308 (40%), Positives = 184/308 (59%), Gaps = 12/308 (3%)
Query: 128 MSSLSLKRNQWLQD--SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFV 185
M L KR + ++ F L DL+G I++L KDQ+GCR+LQ+ + +MIF
Sbjct: 405 MMGLKTKRAEADREFNRFSGMRLEDLQGEILSLCKDQHGCRYLQKKLEEGDPAHRDMIFR 464
Query: 186 EVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLK 245
E ELMIDPFGNY+ QKL+E +EEQR+ I+ ++ND LV I LN HG RAV K
Sbjct: 465 ETYGHFPELMIDPFGNYLCQKLLEHATEEQRSAIIDSVSND---LVGISLNMHGTRAVQK 521
Query: 246 LLENLTNP---QQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADN 302
+++ L P +QI ++ AL V L KD NG++VIQ C+ ED +++ N +A N
Sbjct: 522 MVDFLAQPRQPKQIRTLIYALSVNVVALIKDLNGNHVIQKCLNKLIPEDNQFIYNAIATN 581
Query: 303 CYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ 362
+AT + GCCVLQ ++++ AQR +LV EII N+L L +D +GNYV+Q++L L +
Sbjct: 582 LIEVATHRHGCCVLQRSIDHASPAQRLQLVTEIIFNSLYLVQDPFGNYVIQYILDLNDAR 641
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFG 422
+ L+R G+ C+ + SNVVE+C+ + E ++ E+L + LL +G
Sbjct: 642 FSEPLIRTFIGNV----CSLFSSNVVEKCIRVADPEIRKVLVAEVLNRSRLEKLLRDSYG 697
Query: 423 NYVIQSAL 430
NYVIQ+ L
Sbjct: 698 NYVIQTIL 705
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 106/217 (48%), Gaps = 8/217 (3%)
Query: 229 QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFS 288
+++ +C + HG R + K LE +P ++ L D G+Y+ Q ++H +
Sbjct: 433 EILSLCKDQHGCRYLQKKLEE-GDPAHRDMIFRETYGHFPELMIDPFGNYLCQKLLEHAT 491
Query: 289 HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY----SKGAQRERLVAEIIANALLLAE 344
E +++ V+++ GI+ + G +Q V++ + Q L+ + N + L +
Sbjct: 492 EEQRSAIIDSVSNDLVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLIYALSVNVVALIK 551
Query: 345 DCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRII 404
D GN+V+Q L +P+ + + + + + +++G V++R + + Q +++
Sbjct: 552 DLNGNHVIQKCLNKLIPEDNQFIYNAIATNLIEVATHRHGCCVLQRSIDHASPAQRLQLV 611
Query: 405 IELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSSP 441
E++ N L+ PFGNYVIQ L ++ R FS P
Sbjct: 612 TEIIF--NSLYLVQDPFGNYVIQYILDLNDAR-FSEP 645
>gi|328853049|gb|EGG02190.1| hypothetical protein MELLADRAFT_24024 [Melampsora larici-populina
98AG31]
Length = 325
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/283 (40%), Positives = 174/283 (61%), Gaps = 3/283 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D++G++ L KDQ+GCR LQ+ + +MIF E+ ELM D FGNY+ QKL
Sbjct: 10 LEDMQGDMFGLCKDQHGCRFLQKKLEEGEPTHRDMIFAEIYPHFGELMTDAFGNYLSQKL 69
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E ++EQR L++ + +LV I LN HG RAV K+++ L+ +Q+ ++ AL
Sbjct: 70 LEYSTDEQRD---LLIESISGELVSISLNMHGTRAVQKMIDFLSTQRQVQSLIIALNLNV 126
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
VTL KD NG++VIQ C+ H ED +++ N VA NC +AT + GCCVLQ C++++ +Q
Sbjct: 127 VTLIKDLNGNHVIQKCLNHLPPEDNQFIYNAVAANCIEVATHRHGCCVLQRCIDHASESQ 186
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R +LV EI N+L L +D +GNYVVQ++L L + +++RQ G+ + S K+ SNV
Sbjct: 187 RIQLVTEITYNSLSLVQDPFGNYVVQYVLDLNDSRFIEAIVRQFLGNVCALSMQKFSSNV 246
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
VE+C+ S ++ EL + LL F NYV+Q+AL
Sbjct: 247 VEKCIRVSDPAGRRALVEELSGRQRLERLLRDSFANYVVQTAL 289
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 101/209 (48%), Gaps = 4/209 (1%)
Query: 233 ICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDT 292
+C + HG R + K LE P ++ A + P L D G+Y+ Q +++ + E
Sbjct: 20 LCKDQHGCRFLQKKLEE-GEPTHRDMIFAEIYPHFGELMTDAFGNYLSQKLLEYSTDEQR 78
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGAQRERLVAEIIANALLLAEDCYGNYV 351
L+ ++ I+ + G +Q +++ S Q + L+ + N + L +D GN+V
Sbjct: 79 DLLIESISGELVSISLNMHGTRAVQKMIDFLSTQRQVQSLIIALNLNVVTLIKDLNGNHV 138
Query: 352 VQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSP 411
+Q L P+ + + + + + +++G V++RC+ + E Q +++ E+ +
Sbjct: 139 IQKCLNHLPPEDNQFIYNAVAANCIEVATHRHGCCVLQRCIDHASESQRIQLVTEI--TY 196
Query: 412 NVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
N L+ PFGNYV+Q L ++ R +
Sbjct: 197 NSLSLVQDPFGNYVVQYVLDLNDSRFIEA 225
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 6/184 (3%)
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSE 213
N+V L KD G +Q+ ++ LP E+ + I+ V E+ G V+Q+ ++ SE
Sbjct: 125 NVVTLIKDLNGNHVIQKCLNHLPPEDNQFIYNAVAANCIEVATHRHGCCVLQRCIDHASE 184
Query: 214 EQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKD 273
QR +++ +T + LV+ + ++ VL +L + + I ++ L+
Sbjct: 185 SQRIQLVTEITYNSLSLVQDPFGNYVVQYVL----DLNDSRFIEAIVRQFLGNVCALSMQ 240
Query: 274 TNGHYVIQYCVKHFSHEDTKYLLNEVA--DNCYGIATDKSGCCVLQHCVEYSKGAQRERL 331
V++ C++ + L+ E++ + D V+Q ++YS AQR +L
Sbjct: 241 KFSSNVVEKCIRVSDPAGRRALVEELSGRQRLERLLRDSFANYVVQTALDYSDPAQRAQL 300
Query: 332 VAEI 335
V I
Sbjct: 301 VDNI 304
>gi|388579386|gb|EIM19710.1| ARM repeat-containing protein, partial [Wallemia sebi CBS 633.66]
Length = 664
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 113/293 (38%), Positives = 177/293 (60%), Gaps = 13/293 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEI----------EMIFVEVIDRVCELMID 197
L D++G I +L KDQ+GCR+LQ+ + + ++IF ++ ELM D
Sbjct: 180 LEDIKGEIYSLCKDQHGCRYLQKKLEDDDAVDEVVDGVQLTSRQLIFNQIYTHFSELMTD 239
Query: 198 PFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQIS 257
PFGNY+ QK++E +++QR + ++ +LV I LN HG RAV K+++ L+ +QI+
Sbjct: 240 PFGNYLCQKMLEFANDQQRDTLCETVSP---ELVTISLNMHGTRAVQKMIDYLSTRRQIN 296
Query: 258 LVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQ 317
++ +L VTL KD NG++VIQ C+ D +++ N VA NC +AT + GCCVLQ
Sbjct: 297 TIIMSLSLNVVTLIKDLNGNHVIQKCLNRLIPNDNQFIYNAVASNCIEVATHRHGCCVLQ 356
Query: 318 HCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVS 377
C++++ QR +LV EI +AL L +D +GNYVVQ++L L + + ++RQ GH +
Sbjct: 357 RCIDHASDQQRIQLVTEITYHALTLIQDPFGNYVVQYVLDLNDNRFSDGVVRQFLGHICA 416
Query: 378 FSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
S K+ SNV+E+C+ + + +I EL P + LL FGNYV+Q+AL
Sbjct: 417 LSVQKFSSNVIEKCIRVADASTRSSVIDELNHRPRLEKLLRDAFGNYVVQTAL 469
>gi|402076055|gb|EJT71478.1| RNA-binding protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1066
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 175/291 (60%), Gaps = 3/291 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F+ SL + G I L KDQ+GCR+LQ+ + + E + MI++E V ELM DPFGNY
Sbjct: 600 FNNLSLEQVGGTIYELCKDQHGCRYLQKQLENRQPEHVHMIWLETNQHVVELMTDPFGNY 659
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E C+EE+RT +++ N +VRI LN HG RA+ K++E + +Q+ +++ +
Sbjct: 660 LCQKLLEYCNEEERT---VLIQNASQDMVRIALNQHGTRALQKMIEFINTDEQVQIIIES 716
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ + ++++ + V + + T + GCCVLQ C+++
Sbjct: 717 LRNRVVELIQDLNGNHVIQKCLNKLNCTQSQFIFDAVGKSAIDVGTHRHGCCVLQRCIDH 776
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G Q+ L+ I +A+ L +D +GNYVVQ+++ L P T L+ G + S +K
Sbjct: 777 ASGDQKVWLIQRITEHAVALVQDPFGNYVVQYIIDLNEPSFTEPLVGMFRGRISALSRHK 836
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVS 433
+ SNV+E+CL + + I E+L + LL F NYVIQ+AL S
Sbjct: 837 FSSNVIEKCLRCAQDGSKDMIAEEILAPGEIERLLRDSFANYVIQTALEYS 887
>gi|225678938|gb|EEH17222.1| RNA-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 1070
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 172/308 (55%), Gaps = 23/308 (7%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F + L +G + ++ KDQYGCR+LQ+ + ++MIF+E V ELM DPFGNY
Sbjct: 599 FGNAPLETYQGELYSMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNY 658
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQRT ++ N QLV+I LN HG RA+ K++E ++ P+Q V+ A
Sbjct: 659 LCQKLLEYSNDEQRT---ALINNAAPQLVKIALNQHGTRALQKMIEFISTPEQTQTVIKA 715
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ S D +++ + V +C + T + GCCVLQ C+++
Sbjct: 716 LRGRVVELVQDLNGNHVIQKCLNRLSATDAQFIYDAVGASCVPVGTHRHGCCVLQRCIDH 775
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--------------------Q 362
+ G QR RL+ +I NA L +D +GNYVVQ++ P
Sbjct: 776 ASGDQRARLIEQITKNAFTLVQDPFGNYVVQYICKEHQPPQMIWTNFANNDDAVDLNERH 835
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFG 422
+ R G+ + S K+ SNV+E+C+ + + +I E+L + +L F
Sbjct: 836 FIEPICRSFRGNIPALSKQKFSSNVIEKCIRTADNQCRAALIEEMLVPSELEKMLRDSFA 895
Query: 423 NYVIQSAL 430
NYV+Q+A+
Sbjct: 896 NYVVQTAM 903
>gi|378727687|gb|EHY54146.1| hypothetical protein HMPREF1120_02321 [Exophiala dermatitidis
NIH/UT8656]
Length = 1006
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 169/297 (56%), Gaps = 3/297 (1%)
Query: 134 KRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE 193
+RN + F L + RG++ L KDQ+GCR+LQR + +E I+ IF E + E
Sbjct: 572 RRNHGDEARFANMPLENYRGSLYELCKDQHGCRYLQRKLEDGNEEHIQAIFAETCPHIIE 631
Query: 194 LMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNP 253
LM DPFGNY+ QKL E C+EEQRT ++ L I LN HG RA+ K++E +
Sbjct: 632 LMTDPFGNYLCQKLFEFCTEEQRT---ALINTAAPALTTIALNQHGTRALQKMIEFVRTE 688
Query: 254 QQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGC 313
+Q+ ++ AL V L +D NG++V+Q C+ E ++++ + V C + T + GC
Sbjct: 689 EQVETIIRALSDRVVDLVQDLNGNHVVQKCLTRLGAERSQFIYDAVGKYCVVVGTHRHGC 748
Query: 314 CVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEG 373
CVLQ C+++++G QR +L+A I A L +D +GNYVVQ++L L T L G
Sbjct: 749 CVLQRCIDHAQGFQRAQLIARITHCAFDLVQDPFGNYVVQYILDLDEISFTKPLCESFLG 808
Query: 374 HYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
S K+ SNV+E+CL + + R+I E+L + +L F NYV+Q+AL
Sbjct: 809 RIPQLSKQKFSSNVIEKCLRTADSDTKRRMIEEMLIGNELEKMLRDAFANYVVQTAL 865
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 105/223 (47%), Gaps = 7/223 (3%)
Query: 221 LMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVI 280
+ L N L +C + HG R + + LE+ N + I + A P + L D G+Y+
Sbjct: 584 MPLENYRGSLYELCKDQHGCRYLQRKLED-GNEEHIQAIFAETCPHIIELMTDPFGNYLC 642
Query: 281 QYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANAL 340
Q + + E L+N A IA ++ G LQ +E+ + ++ + +++ +
Sbjct: 643 QKLFEFCTEEQRTALINTAAPALTTIALNQHGTRALQKMIEFVRTEEQVETIIRALSDRV 702
Query: 341 L-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHY-VSFSCNKYGSNVVERCLLESGEE 398
+ L +D GN+VVQ L R+ + + G Y V +++G V++RC+ +
Sbjct: 703 VDLVQDLNGNHVVQKCLT-RLGAERSQFIYDAVGKYCVVVGTHRHGCCVLQRCIDHAQGF 761
Query: 399 QSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSSP 441
Q ++I + L+ PFGNYV+Q L + ++ F+ P
Sbjct: 762 QRAQLIARITHC--AFDLVQDPFGNYVVQYILDLDEIS-FTKP 801
>gi|302412761|ref|XP_003004213.1| pumilio domain-containing protein [Verticillium albo-atrum VaMs.102]
gi|261356789|gb|EEY19217.1| pumilio domain-containing protein [Verticillium albo-atrum VaMs.102]
Length = 1157
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 183/312 (58%), Gaps = 5/312 (1%)
Query: 121 SVPRNQWMSSLSLKRNQW--LQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKE 178
S PR+ + +R Q + L + G I L KDQ+GCR+LQ+ + +
Sbjct: 733 SAPRDSQARVIQHRRQQDNDAMQRYQNLPLEHVGGQIYELCKDQHGCRYLQKKLEERNPD 792
Query: 179 EIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH 238
++ MI++E V ELM DPFGNY+ QKL+E C++++RT +++ N +VRI LN H
Sbjct: 793 QVHMIWLETNQHVIELMTDPFGNYLCQKLLEYCNDDERT---VLIQNAAQDMVRIALNQH 849
Query: 239 GIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNE 298
G RA+ K++E +T Q+ +++ ALR V L +D NG++VIQ C+ S D +++ +
Sbjct: 850 GTRALQKMIEFVTTSIQVQMIIDALRYRVVELIQDLNGNHVIQKCLNKLSAPDAQFIFDA 909
Query: 299 VADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLAL 358
V ++C + T + GCCVLQ C++++ GAQ+ L+ +I +A +L +D +GNYVVQ+++ L
Sbjct: 910 VGNHCVDVGTHRHGCCVLQRCIDHADGAQKVWLIGKITEHAPVLVQDPFGNYVVQYIIDL 969
Query: 359 RVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLM 418
P T ++ S +K+ SNV+E+ L S + I+ ELL+ + LL
Sbjct: 970 NEPAFTEPVVGMFRNRICQLSRHKFSSNVIEKLLRCSQAQGRDMIVDELLQPGEMDRLLR 1029
Query: 419 HPFGNYVIQSAL 430
+ NYVIQ+AL
Sbjct: 1030 DSYANYVIQTAL 1041
>gi|346972361|gb|EGY15813.1| pumilio domain-containing protein [Verticillium dahliae VdLs.17]
Length = 905
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/283 (38%), Positives = 174/283 (61%), Gaps = 3/283 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L + G I L KDQ+GCR+LQ+ + +++ MI++E V ELM DPFGNY+ QKL
Sbjct: 441 LEHVGGQIYELCKDQHGCRYLQKKLEERNPDQVHMIWLETNQHVIELMTDPFGNYLCQKL 500
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E C++++RT +++ N +VRI LN HG RA+ K++E +T Q+ +++ ALR
Sbjct: 501 LEYCNDDERT---VLIQNAAQDMVRIALNQHGTRALQKMIEFVTTSIQVQMIIDALRYRV 557
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L +D NG++VIQ C+ S D +++ + V ++C + T + GCCVLQ C++++ GAQ
Sbjct: 558 VELIQDLNGNHVIQKCLNKLSAPDAQFIFDAVGNHCVDVGTHRHGCCVLQRCIDHADGAQ 617
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ L+ +I +A +L +D +GNYVVQ+++ L P T ++ S +K+ SNV
Sbjct: 618 KVWLIGKITEHAPVLVQDPFGNYVVQYIIDLNEPAFTEPVVGMFRNRICQLSRHKFSSNV 677
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+E+ L S + I+ ELL+ + LL + NYVIQ+AL
Sbjct: 678 IEKLLRCSQAQGRDMIVDELLQPGEMDRLLRDSYANYVIQTAL 720
>gi|389624159|ref|XP_003709733.1| RNA-binding protein [Magnaporthe oryzae 70-15]
gi|351649262|gb|EHA57121.1| RNA-binding protein [Magnaporthe oryzae 70-15]
Length = 1053
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 173/291 (59%), Gaps = 3/291 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F+ L + G I L KDQ+GCR+LQ+ + +++ MI++E V ELM DPFGNY
Sbjct: 585 FNNLPLESVGGTIYELCKDQHGCRYLQKQLEGRVPDQVHMIWLETNQHVVELMTDPFGNY 644
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E C+EE+RT +++ N +VRI LN HG RA+ K++E + +Q+ +++ +
Sbjct: 645 LCQKLLEFCNEEERT---VLIQNASQDMVRIALNQHGTRALQKMIEFINTEEQVQIIIES 701
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ S ++++ + V + T + GCCVLQ C+++
Sbjct: 702 LRDRVVELIQDLNGNHVIQKCLNKLSCLHSQFIFDAVGAAAVEVGTHRHGCCVLQRCIDH 761
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G Q+ L+A I +A+ L +D +GNYVVQ+++ L P T L+ G S +K
Sbjct: 762 ASGDQKVWLIARITEHAVTLVQDPFGNYVVQYIIDLNEPTFTEPLVGMFRGRISFLSRHK 821
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVS 433
+ SNV+E+CL S + I E+L + L+ F NYVIQ+AL S
Sbjct: 822 FSSNVIEKCLRCSADVSKDMIAEEILAPGEIERLIRDSFANYVIQTALEYS 872
>gi|396458556|ref|XP_003833891.1| similar to mRNA binding protein Pumilio 2 [Leptosphaeria maculans
JN3]
gi|312210439|emb|CBX90526.1| similar to mRNA binding protein Pumilio 2 [Leptosphaeria maculans
JN3]
Length = 1025
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/279 (39%), Positives = 164/279 (58%), Gaps = 3/279 (1%)
Query: 152 RGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELC 211
R I L KDQ+GCR LQ+ + E I++IF E V ELM DPFGNY+ QKL+E C
Sbjct: 615 RHEIYTLCKDQHGCRFLQKKLEDRNHEHIQIIFEETNPHVVELMTDPFGNYLCQKLLEFC 674
Query: 212 SEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLT 271
++EQR ++ N +V I LN HG RA+ K++E ++ Q +++ AL V L
Sbjct: 675 NDEQRN---TLVRNASPAMVSIALNQHGTRALQKMIEYISTEDQTQMIIQALSGQVVDLI 731
Query: 272 KDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERL 331
+D NG++VIQ C+ H + +++ + V ++C + T + GCCVLQ C++++ G Q+ L
Sbjct: 732 QDLNGNHVIQKCLNHLKPSEAQFIFDAVGEHCVTVGTHRHGCCVLQRCIDHAAGYQKIDL 791
Query: 332 VAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERC 391
V I NA L +D +GNYVVQ++L L T + + EG S K+ SNV+E+C
Sbjct: 792 VHRITQNAFSLVQDPFGNYVVQYILDLNDENFTTPMCKSFEGRVPELSKQKFSSNVIEKC 851
Query: 392 LLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ + + +I ELL + ML+ +GNYVIQ+AL
Sbjct: 852 IRCANMDAKAMMIQELLDMVELEMLMRDQYGNYVIQTAL 890
>gi|440472633|gb|ELQ41484.1| pumilio domain-containing protein, partial [Magnaporthe oryzae Y34]
gi|440485994|gb|ELQ65903.1| pumilio domain-containing protein, partial [Magnaporthe oryzae
P131]
Length = 811
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 173/291 (59%), Gaps = 3/291 (1%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F+ L + G I L KDQ+GCR+LQ+ + +++ MI++E V ELM DPFGNY
Sbjct: 343 FNNLPLESVGGTIYELCKDQHGCRYLQKQLEGRVPDQVHMIWLETNQHVVELMTDPFGNY 402
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E C+EE+RT +++ N +VRI LN HG RA+ K++E + +Q+ +++ +
Sbjct: 403 LCQKLLEFCNEEERT---VLIQNASQDMVRIALNQHGTRALQKMIEFINTEEQVQIIIES 459
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ S ++++ + V + T + GCCVLQ C+++
Sbjct: 460 LRDRVVELIQDLNGNHVIQKCLNKLSCLHSQFIFDAVGAAAVEVGTHRHGCCVLQRCIDH 519
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G Q+ L+A I +A+ L +D +GNYVVQ+++ L P T L+ G S +K
Sbjct: 520 ASGDQKVWLIARITEHAVTLVQDPFGNYVVQYIIDLNEPTFTEPLVGMFRGRISFLSRHK 579
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVS 433
+ SNV+E+CL S + I E+L + L+ F NYVIQ+AL S
Sbjct: 580 FSSNVIEKCLRCSADVSKDMIAEEILAPGEIERLIRDSFANYVIQTALEYS 630
>gi|19115035|ref|NP_594123.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|2842704|sp|Q92359.1|YDHE_SCHPO RecName: Full=Pumilio domain-containing protein C6G9.14
gi|1644326|emb|CAB03616.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe]
Length = 681
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 108/283 (38%), Positives = 175/283 (61%), Gaps = 3/283 (1%)
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSE 213
NI++ KDQ+GCR+LQR + + I+ +F E + LM+D FGNY+ QKL E SE
Sbjct: 347 NILSFCKDQHGCRYLQRLLEKKNQSHIDAVFAETHPYLAVLMVDAFGNYLCQKLFEHASE 406
Query: 214 EQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKD 273
QR+ + ++ +LV I N HG RA+ K+++ +++P QIS ++ ALRP V LTKD
Sbjct: 407 AQRSTFIQIIAP---KLVPISFNMHGTRALQKIIDLVSSPDQISCIVNALRPNVVLLTKD 463
Query: 274 TNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVA 333
NG++VIQ C+ FS ED +++ + + ++ ++T + GCCV+Q C +++ AQ E+LV
Sbjct: 464 LNGNHVIQKCLNKFSQEDCQFIFDAICEDPLDVSTHRHGCCVVQRCFDHASPAQIEQLVE 523
Query: 334 EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLL 393
I+ +AL L +D +GNYV+Q++L L P T +++ + S K+ SNV+E+C+
Sbjct: 524 HIVPHALTLVQDAFGNYVLQYVLELNNPNHTEAIISYFLYKVRALSTQKFSSNVMEKCIF 583
Query: 394 ESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVR 436
+ ++I EL+ ++ LL F NYVIQ+AL + V+
Sbjct: 584 FAPAAIKEKLISELMDEKHLPKLLRDSFANYVIQTALDNASVK 626
>gi|345568412|gb|EGX51306.1| hypothetical protein AOL_s00054g376 [Arthrobotrys oligospora ATCC
24927]
Length = 965
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 170/306 (55%), Gaps = 21/306 (6%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F + L I L KDQ+GCR LQR + ++IE+IF E + ELM DPFGNY
Sbjct: 556 FSNLDIEALGNEIYLLCKDQHGCRFLQRKLEEQNPKDIEIIFRETQAFIVELMTDPFGNY 615
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E + EQR++ ++ N LV I LN HG RA+ K++E L+ P QI V+ A
Sbjct: 616 LCQKLLEHTNNEQRSK---LVNNAAPHLVEIALNQHGTRALQKMIEFLSTPDQIQTVINA 672
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LR V L +D NG++VIQ C+ ED +++ + V N + T + GCCVLQ C+++
Sbjct: 673 LRGKVVELIQDLNGNHVIQKCLNRLKPEDAQFIFDAVGKNSVTVGTHRHGCCVLQRCIDH 732
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ QR +L+A I NA L D +GNYVVQ++L L P++ ++ + G + S K
Sbjct: 733 ASTPQRAQLIAHITENAFALVRDPFGNYVVQYILDLGEPELAEPMIHKFLGRIIELSMQK 792
Query: 383 YGSNVVER------------------CLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
+ SNV+E+ C+ S +E ++ E++ P + L+ + NY
Sbjct: 793 FSSNVIEKVCPFQIQRPIPSGLTLAQCIRVSSKETRALMVKEIVNPPELEKLIRDSYANY 852
Query: 425 VIQSAL 430
VIQ+AL
Sbjct: 853 VIQTAL 858
>gi|374109827|gb|AEY98732.1| FAGL086Cp [Ashbya gossypii FDAG1]
Length = 735
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 179/295 (60%), Gaps = 12/295 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D G + +L KDQ+GCR LQR + + IF E V ELM D FGNY++QKL
Sbjct: 409 LEDYIGKLYSLCKDQHGCRFLQRQLDVAGPDAATSIFEETKPYVVELMTDSFGNYLIQKL 468
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
VE S EQR I L+ ++ D Q V I L+ HG RA+ KL+E ++ ++ +++A+L+
Sbjct: 469 VERVSAEQR--ITLVKSSAD-QFVSIALDPHGTRALQKLVECISTEEESRIIIASLKNSV 525
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L+KD NG++V+Q C++ FS D++++ + +C IAT + GCCVLQ C++Y Q
Sbjct: 526 VQLSKDLNGNHVVQKCLQKFSSADSQFIFDAACADCVKIATHRHGCCVLQRCLDYGSDQQ 585
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLA----LRVPQITASLLRQLEGHYVSFSCNKY 383
R++L A+++AN L D +GNYVVQ++L L P T ++ L+ + S +K+
Sbjct: 586 RDQLCAQVLANVDALTLDPFGNYVVQYILTKEAELPPPTYTTKIVDTLKPRVIELSLHKF 645
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRS---PNVSMLLMHPFGNYVIQSALLVSKV 435
GSNVVE+ L S + +I ELL + P V LL FGNYV+Q+AL VSK
Sbjct: 646 GSNVVEKILRTSAVAE--LMISELLATGGQPGVEQLLHDGFGNYVLQTALDVSKA 698
>gi|302309271|ref|NP_986580.2| AGL086Cp [Ashbya gossypii ATCC 10895]
gi|299788279|gb|AAS54404.2| AGL086Cp [Ashbya gossypii ATCC 10895]
Length = 735
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 179/295 (60%), Gaps = 12/295 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D G + +L KDQ+GCR LQR + + IF E V ELM D FGNY++QKL
Sbjct: 409 LEDYIGKLYSLCKDQHGCRFLQRQLDVAGPDAATSIFEETKPYVVELMTDSFGNYLIQKL 468
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
VE S EQR I L+ ++ D Q V I L+ HG RA+ KL+E ++ ++ +++A+L+
Sbjct: 469 VERVSAEQR--ITLVKSSAD-QFVSIALDPHGTRALQKLVECISTEEESRIIIASLKNSV 525
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L+KD NG++V+Q C++ FS D++++ + +C IAT + GCCVLQ C++Y Q
Sbjct: 526 VQLSKDLNGNHVVQKCLQKFSSADSQFIFDAACADCVKIATHRHGCCVLQRCLDYGSDQQ 585
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLA----LRVPQITASLLRQLEGHYVSFSCNKY 383
R++L A+++AN L D +GNYVVQ++L L P T ++ L+ + S +K+
Sbjct: 586 RDQLCAQVLANVDALTLDPFGNYVVQYILTKEAELPPPTYTTKIVDTLKPRVIELSLHKF 645
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRS---PNVSMLLMHPFGNYVIQSALLVSKV 435
GSNVVE+ L S + +I ELL + P V LL FGNYV+Q+AL VSK
Sbjct: 646 GSNVVEKILRTSAVAE--LMISELLATGGQPGVEQLLHDGFGNYVLQTALDVSKA 698
>gi|452822083|gb|EME29106.1| serine rich Pumilio family RNA binding domain protein [Galdieria
sulphuraria]
Length = 848
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 171/289 (59%), Gaps = 4/289 (1%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
S+ ++ G I LAKDQ+GCR LQ + I MI E D + ELM+DPFGNY+ QK
Sbjct: 523 SMEEIVGRIFELAKDQHGCRFLQMKLEEGNPAYIAMILAECFDGLPELMVDPFGNYLCQK 582
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L E C+ +QR L +L N L ++ +N HG R V +++E + QIS V AL P
Sbjct: 583 LFECCNFQQR---LSILQNTCSVLAQVSMNMHGTRVVQRIIECMEGEDQISTVCTALTPF 639
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
A L KD NG++VIQ C++ + +++ + V +C +AT + GCCV+Q C++Y+
Sbjct: 640 ASQLMKDVNGNHVIQRCLQKVAPTHNQFIFDAVVSHCVELATHRHGCCVIQRCLDYAIPL 699
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q+E++ EI NA L +D +GNYVVQ++L L+ A ++ QL GH S K+ SN
Sbjct: 700 QKEQVCMEICENAFTLVQDAFGNYVVQYVLDLKNRFYIAKIIAQLAGHLYELSVQKFSSN 759
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMH-PFGNYVIQSALLVSK 434
VVE+CL + E +I EL+ + L+H +GNYV+Q AL +++
Sbjct: 760 VVEKCLQQVDPETRKHLIYELMSDRELLGRLLHDAYGNYVVQRALQLAQ 808
>gi|451994865|gb|EMD87334.1| hypothetical protein COCHEDRAFT_1113338 [Cochliobolus
heterostrophus C5]
Length = 922
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 168/286 (58%), Gaps = 3/286 (1%)
Query: 152 RGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELC 211
R I +L KDQ+GCR LQ+ + E I++IF E V ELM DPFGNY+ QKL+E C
Sbjct: 506 RQEIYSLCKDQHGCRFLQKKLEERNAENIQIIFDETAPHVVELMTDPFGNYLCQKLLEFC 565
Query: 212 SEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLT 271
++EQR +++ N +V+I N HG RA+ K++E ++ Q +++ AL V L
Sbjct: 566 NDEQRN---ILVRNAAPAMVQIAFNQHGTRALQKMIEFISTDDQTQMIIRALSGQVVDLI 622
Query: 272 KDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERL 331
+D NG++VIQ C+ H D +++ + V ++C + T + GCCVLQ C++++ G Q+ L
Sbjct: 623 QDLNGNHVIQKCLNHLKSPDAQFIFDAVGEHCITVGTHRHGCCVLQRCIDHASGFQKVDL 682
Query: 332 VAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERC 391
+ +I A++ L +D +GNYVVQ++L L T + + +G S K+ SNV+E+C
Sbjct: 683 IRKITAHSFHLVQDPFGNYVVQYILDLNDASFTTPMCQGFQGKICELSKQKFSSNVIEKC 742
Query: 392 LLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
+ + +I ELL + L+ +GNYVIQ+AL + L
Sbjct: 743 IRCAEPHVKGMMIEELLDVEQLEQLMRDSYGNYVIQTALEFAPAEL 788
>gi|71028510|ref|XP_763898.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350852|gb|EAN31615.1| RNA-binding protein, putative [Theileria parva]
Length = 915
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/319 (38%), Positives = 180/319 (56%), Gaps = 11/319 (3%)
Query: 119 LSSVPRNQWMSSLSLKRNQWLQDSF-DCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPK 177
L + PR S S WL+DSF +C L GN+ A+A+DQ GCR LQR +
Sbjct: 260 LKAKPRPVTRPSFSGLNYAWLKDSFFNCQIL----GNVAAIAQDQTGCRMLQRQLECSDT 315
Query: 178 EEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNT 237
+ EV+D + LM DPFGNY+ QKL+ +C Q I+ T + Q + ICLN
Sbjct: 316 AFTSAVLREVLDNLFLLMTDPFGNYLCQKLMSVCDAGQLGDII---TGCETQFIPICLNM 372
Query: 238 HGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLN 297
HG RA+ KL+E + + ++ + A L G V L D NG++VIQ C+ S +D +++
Sbjct: 373 HGTRAIQKLIE-VVSGNNVNRITAILSAGVVELINDLNGNHVIQKCLVALSSDDCEFIYR 431
Query: 298 EVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLA 357
+ ++C G+AT + GCCV+Q C++ + QR +LV I A L L ED YGNYV+Q++L
Sbjct: 432 AMNEHCVGLATHRHGCCVMQRCIDAASPTQRAKLVDTIAAKTLELVEDAYGNYVIQYVLR 491
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSM-- 415
LR + A ++ L FS +K+ SNVVERCL+ + ++ L P +
Sbjct: 492 LRDDAVNARIVSLLCEDLTKFSKHKFSSNVVERCLIFCPSSVRSNLVSRFLNLPFSVLHD 551
Query: 416 LLMHPFGNYVIQSALLVSK 434
L++ PFGNYVIQ L V++
Sbjct: 552 LILDPFGNYVIQRVLNVAQ 570
>gi|189195174|ref|XP_001933925.1| mRNA binding protein Pumilio 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979804|gb|EDU46430.1| mRNA binding protein Pumilio 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1009
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 175/296 (59%), Gaps = 5/296 (1%)
Query: 142 SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGN 201
S+D ++ R I L KDQ+GCR LQ+ + E I++IF E V ELM DPFGN
Sbjct: 585 SYDLKTM--PRQEIYGLCKDQHGCRFLQKKLEERNPEHIQIIFDETALHVVELMTDPFGN 642
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLA 261
Y+ QKL+E C++EQR ++ T+ +V+I N HG RA+ K++E ++ +Q +++
Sbjct: 643 YLCQKLLEYCNDEQRNTLVRNATS---AMVQIAFNQHGTRALQKMIEFISTDEQTQMIIQ 699
Query: 262 ALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVE 321
AL V L +D NG++VIQ C+ H + +++ + V ++C + T + GCCVLQ C++
Sbjct: 700 ALSGEVVDLIQDLNGNHVIQKCLNHLKSPEAQFIFDAVGEHCVVVGTHRHGCCVLQRCID 759
Query: 322 YSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
++ G Q+ L+ +I A++ L +D +GNYV+Q++L L T + + +G S
Sbjct: 760 HASGFQKVDLIRKITAHSFQLVQDPFGNYVIQYILDLNDASFTTPMCQGFQGKICELSMQ 819
Query: 382 KYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
K+ SNV+E+C+ + + +I ELL ++ L+ FGNYVIQ+AL + L
Sbjct: 820 KFSSNVIEKCIRCAEPQVKAMMIEELLDVEQLNSLMRDSFGNYVIQTALEFAPAEL 875
>gi|403224139|dbj|BAM42269.1| RNA-binding protein Puf1 [Theileria orientalis strain Shintoku]
Length = 700
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 180/300 (60%), Gaps = 11/300 (3%)
Query: 138 WLQDSF-DCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
WL+DSF +C L GN+V++A+DQ GCR LQR + + I + EV+D + LM
Sbjct: 210 WLKDSFFNCQIL----GNVVSIAQDQTGCRMLQRQLECNDHQFIASVLNEVLDNLYMLMT 265
Query: 197 DPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQI 256
DPFGNY+ QKL+ +C +Q +I+ T+ + Q + ICLN HG RA+ KL+E +T + I
Sbjct: 266 DPFGNYLCQKLMSVCDSDQLGKII---TSCEPQFISICLNMHGTRAIQKLIEVVTE-ENI 321
Query: 257 SLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVL 316
+ + + L G V L D NG++VIQ C+ S E ++ + +NC +AT + GCCV+
Sbjct: 322 TRITSILSTGVVDLVNDLNGNHVIQKCLVSLSSEHCDFIYKAMNENCVYLATHRHGCCVM 381
Query: 317 QHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYV 376
Q C++ + AQR +L+ I + L L ED YGNYV+Q++L L+ I + ++ L
Sbjct: 382 QRCIDAASPAQRAKLIDTISSKTLELVEDAYGNYVIQYVLRLKDDAINSRIVAFLCEDVT 441
Query: 377 SFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN--VSMLLMHPFGNYVIQSALLVSK 434
F+ K+ SNVVERCL+ E + +I + L P + L++ PFGNYVIQ L V++
Sbjct: 442 KFAKQKFSSNVVERCLIFCPLEVRSTLISKFLNVPFDVLKDLILDPFGNYVIQRVLNVAQ 501
>gi|451846158|gb|EMD59469.1| hypothetical protein COCSADRAFT_259016 [Cochliobolus sativus
ND90Pr]
Length = 1004
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 167/286 (58%), Gaps = 3/286 (1%)
Query: 152 RGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELC 211
R I +L KDQ+GCR LQ+ + E I++IF E V ELM DPFGNY+ QKL+E C
Sbjct: 588 RQEIYSLCKDQHGCRFLQKKLEERNAENIQIIFDETAPHVVELMTDPFGNYLCQKLLEFC 647
Query: 212 SEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLT 271
++EQR ++ N +V+I N HG RA+ K++E ++ Q +++ AL V L
Sbjct: 648 NDEQRN---TLVRNAAPAMVQIAFNQHGTRALQKMIEFISTDDQTQMIIRALSGQVVDLI 704
Query: 272 KDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERL 331
+D NG++VIQ C+ H D +++ + V ++C + T + GCCVLQ C++++ G Q+ L
Sbjct: 705 QDLNGNHVIQKCLNHLKSPDAQFIFDAVGEHCITVGTHRHGCCVLQRCIDHASGFQKVDL 764
Query: 332 VAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERC 391
+ +I A++ L +D +GNYVVQ++L L T + + +G S K+ SNV+E+C
Sbjct: 765 IRKITAHSFHLVQDPFGNYVVQYILDLNDTSFTTPMCQGFQGKICELSKQKFSSNVIEKC 824
Query: 392 LLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
+ + +I ELL + L+ +GNYVIQ+AL + L
Sbjct: 825 IRCAEPHVKGMMIEELLDVEQLEQLMRDSYGNYVIQTALEFAPAEL 870
>gi|302142233|emb|CBI19436.3| unnamed protein product [Vitis vinifera]
Length = 167
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 102/145 (70%), Positives = 126/145 (86%)
Query: 294 YLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQ 353
YL+ EVA+NC+ IAT++SGCCVLQ CVE S+G RE+L+AEIIANAL LAED YGNYVVQ
Sbjct: 12 YLIKEVAENCFEIATNRSGCCVLQSCVENSQGELREQLMAEIIANALPLAEDRYGNYVVQ 71
Query: 354 HLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNV 413
HL+ L++P++ +LL+Q EG ++S SCNKYGSNVVE+ L+ES +EQS++IIIELLRSPNV
Sbjct: 72 HLMGLKIPEVITNLLKQFEGTFISLSCNKYGSNVVEKFLIESKDEQSSQIIIELLRSPNV 131
Query: 414 SMLLMHPFGNYVIQSALLVSKVRLF 438
SMLL+ PFGN+VIQSAL VSKVR F
Sbjct: 132 SMLLLDPFGNFVIQSALSVSKVRSF 156
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
++++ N +A ++ GC LQ + + E E + E+I L D +GNYVVQ L
Sbjct: 14 IKEVAENCFEIATNRSGCCVLQSCVENSQGELREQLMAEIIANALPLAEDRYGNYVVQHL 73
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR-PG 266
+ L E T +L + + + N +G V K L + Q +++ LR P
Sbjct: 74 MGLKIPEVITN---LLKQFEGTFISLSCNKYGSNVVEKFLIESKDEQSSQIIIELLRSPN 130
Query: 267 AVTLTKDTNGHYVIQ 281
L D G++VIQ
Sbjct: 131 VSMLLLDPFGNFVIQ 145
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 259 VLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQH 318
++A + A+ L +D G+YV+Q+ + E LL + ++ +K G V++
Sbjct: 49 LMAEIIANALPLAEDRYGNYVVQHLMGLKIPEVITNLLKQFEGTFISLSCNKYGSNVVEK 108
Query: 319 CVEYSKGAQRERLVAEII--ANALLLAEDCYGNYVVQHLLAL 358
+ SK Q +++ E++ N +L D +GN+V+Q L++
Sbjct: 109 FLIESKDEQSSQIIIELLRSPNVSMLLLDPFGNFVIQSALSV 150
>gi|330925771|ref|XP_003301186.1| hypothetical protein PTT_12629 [Pyrenophora teres f. teres 0-1]
gi|311324291|gb|EFQ90713.1| hypothetical protein PTT_12629 [Pyrenophora teres f. teres 0-1]
Length = 1012
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 173/296 (58%), Gaps = 5/296 (1%)
Query: 142 SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGN 201
S+D ++ R I L KDQ+GCR LQ+ + E I++IF E V ELM DPFGN
Sbjct: 587 SYDLKTM--PRQEIYGLCKDQHGCRFLQKKLEERNHEHIQIIFDETAPHVVELMTDPFGN 644
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLA 261
Y+ QKL+E C++EQR ++ N +V+I N HG RA+ K++E ++ +Q +++
Sbjct: 645 YLCQKLLEFCNDEQRN---TLVRNATPAMVQIAFNQHGTRALQKMIEFISTDEQTQMIIQ 701
Query: 262 ALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVE 321
AL V L +D NG++VIQ C+ H + +++ + V ++C + T + GCCVLQ C++
Sbjct: 702 ALSGEVVDLIQDLNGNHVIQKCLNHLKSPEAQFIFDAVGEHCVVVGTHRHGCCVLQRCID 761
Query: 322 YSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
++ G Q+ L+ +I A++ L +D +GNYV+Q++L L T + + + S
Sbjct: 762 HASGFQKVDLIRKITAHSFQLVQDPFGNYVIQYILDLNDASFTTPMCQGFQTKICELSMQ 821
Query: 382 KYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
K+ SNV+E+C+ + + +I ELL ++ L+ FGNYVIQ+AL + L
Sbjct: 822 KFSSNVIEKCIRCAEPQVKAMMIEELLDVEQLNSLMRDSFGNYVIQTALEFAPAEL 877
>gi|84996421|ref|XP_952932.1| pumilio-family RNA-binding protein [Theileria annulata strain
Ankara]
gi|65303929|emb|CAI76308.1| pumilio-family RNA-binding protein, putative [Theileria annulata]
Length = 830
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 175/300 (58%), Gaps = 11/300 (3%)
Query: 138 WLQDSF-DCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
WL+DSF +C L GN+ ++A+DQ GCR LQR + + EV+D + LM
Sbjct: 253 WLKDSFFNCQIL----GNVASIAQDQTGCRMLQRQLECNDTVFTTAVLGEVLDNLFLLMT 308
Query: 197 DPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQI 256
DPFGNY+ QKL+ +C EQ +I+ T + Q + ICLN HG RA+ KL+E + + +
Sbjct: 309 DPFGNYLCQKLMSVCDSEQLGQII---TACEPQFIPICLNMHGTRAIQKLIE-VVSGTNV 364
Query: 257 SLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVL 316
+ A L G V L D NG++VIQ C+ S ++ +++ + ++C G+AT + GCCV+
Sbjct: 365 GRITAILSAGVVELINDLNGNHVIQKCLVALSSDECEFIYKAMNEHCVGLATHRHGCCVM 424
Query: 317 QHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYV 376
Q C++ + QR RLV I A L L ED YGNYV+Q++L LR + A ++ L
Sbjct: 425 QRCIDAASVPQRARLVDTIAAKTLELVEDAYGNYVIQYVLRLRDDAVNARIVALLCEDLT 484
Query: 377 SFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSM--LLMHPFGNYVIQSALLVSK 434
FS +K+ SNVVERCL+ + ++ L P + L++ PFGNYVIQ L V++
Sbjct: 485 RFSKHKFSSNVVERCLIFCPSSVRSNLVSRFLNLPFTVLHDLILDPFGNYVIQRVLNVAQ 544
>gi|406606752|emb|CCH41788.1| hypothetical protein BN7_1327 [Wickerhamomyces ciferrii]
Length = 743
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 138/394 (35%), Positives = 221/394 (56%), Gaps = 32/394 (8%)
Query: 60 SHLNVNDRIFDNPVHHFPLVENGFFS----HPCQEAE---PINQ----DSSILNLLHNHN 108
S+LN DR ENG F+ HP Q + P+N D++ N H+H
Sbjct: 301 SNLNFQDR-----------SENGGFNNQQPHPLQNQQLWPPLNNRNQFDNNGFNSHHHHQ 349
Query: 109 FDGLRSNGNELSSVPRN---QWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGC 165
NG ++ N ++ +R F + L D +G I +L KDQ+GC
Sbjct: 350 GGNNGPNGRRYNNYNGNYHGHGRRNMGQRRRGEDASKFANARLADFQGEIYSLCKDQHGC 409
Query: 166 RHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTN 225
R LQ+ + L +IF E+ V ELMIDPFGNY++QKL+E ++EQR + ++ N
Sbjct: 410 RFLQKQLD-LNTGSSTIIFDEIHQHVIELMIDPFGNYLIQKLLEKVNDEQR---ITLVEN 465
Query: 226 DDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVK 285
Q V I L+ HG RA+ KL+E + ++ +++ +L V+L++D NG++VIQ C++
Sbjct: 466 ASSQFVSIALDPHGTRALQKLVECINTQKEAEIIVESLSSDVVSLSRDLNGNHVIQKCLQ 525
Query: 286 HFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAED 345
+ D++++ + ++NC IAT + GCCVLQ C+++ Q E+L I +A+ L+ D
Sbjct: 526 RLTPADSQFIFDAASENCSKIATHRHGCCVLQRCLDHGSKEQCEQLSLVISKSAVDLSLD 585
Query: 346 CYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIII 405
+GNYVVQ++LA + A ++ ++ V S +K+GSNV+E+CL S S ++I
Sbjct: 586 AFGNYVVQYVLAKDEKEAIAKIIDSVKTEIVKLSLHKFGSNVIEKCLRVS--TLSKQLID 643
Query: 406 ELLRSPN-VSMLLMHPFGNYVIQSALLVSKVRLF 438
E+L+S + + LL PFGNYV+Q++L V+K F
Sbjct: 644 EILKSGDELVKLLNDPFGNYVLQTSLDVAKEEQF 677
>gi|242071465|ref|XP_002451009.1| hypothetical protein SORBIDRAFT_05g022550 [Sorghum bicolor]
gi|241936852|gb|EES09997.1| hypothetical protein SORBIDRAFT_05g022550 [Sorghum bicolor]
Length = 734
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 173/284 (60%), Gaps = 1/284 (0%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
S+ + G + L+KDQ CR LQ+ ++ +E+I+ IF E+I+ V ELM+DP +Y+VQK
Sbjct: 405 SIDEAMGRVCILSKDQDACRFLQKVLTEGTQEDIDKIFSEIIENVGELMVDPTAHYLVQK 464
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
++E+C+ +QRT ++ +T L + N HG R V K++E + Q+S+V++ L G
Sbjct: 465 ILEVCTNDQRTYLIREITKAPISLHKASCNMHGTRVVQKVIETMNTSDQVSMVVSTLNTG 524
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ L D+ G++V +C++ E +LL +A D+ GCCVLQ C+E S
Sbjct: 525 IMRLMTDSYGNHVALHCLEKLLPEHKAFLLETATSRYLQLARDRHGCCVLQKCIENSSDE 584
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
QR L+ +I ++AL+L+ED YGNYV+Q +L L + T ++ +L GH+ + S K GS+
Sbjct: 585 QRNNLLCKITSSALVLSEDQYGNYVIQFILTLNIEWATTRIVDELAGHFGNLSMQKCGSH 644
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
VVE C L+ RII EL+ P + +++ +GN+VIQ+AL
Sbjct: 645 VVEHC-LKLPRPICDRIINELMHDPKLLHIILDQYGNFVIQTAL 687
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 127/253 (50%), Gaps = 11/253 (4%)
Query: 148 LRDLRGNIVALAK---DQYGCRHLQRTMSSL-PKEEIEMIFVEVIDRVCELMIDPFGNYV 203
+R++ ++L K + +G R +Q+ + ++ +++ M+ + + LM D +GN+V
Sbjct: 478 IREITKAPISLHKASCNMHGTRVVQKVIETMNTSDQVSMVVSTLNTGIMRLMTDSYGNHV 537
Query: 204 VQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL 263
+E E + +L T+ QL R + HG + K +EN ++ Q+ +L L +
Sbjct: 538 ALHCLEKLLPEHKAFLLETATSRYLQLAR---DRHGCCVLQKCIENSSDEQRNNL-LCKI 593
Query: 264 RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
A+ L++D G+YVIQ+ + T +++E+A + ++ K G V++HC++
Sbjct: 594 TSSALVLSEDQYGNYVIQFILTLNIEWATTRIVDELAGHFGNLSMQKCGSHVVEHCLKLP 653
Query: 324 KGAQRERLVAEIIANALLL--AEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
+ +R++ E++ + LL D YGN+V+Q L + A+ + + H N
Sbjct: 654 RPI-CDRIINELMHDPKLLHIILDQYGNFVIQTALKQCQGEQHAAFVETIRPHTAVLQSN 712
Query: 382 KYGSNVVERCLLE 394
YG V+ R L+
Sbjct: 713 MYGKRVLSRTCLK 725
>gi|315048481|ref|XP_003173615.1| pumilio domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311341582|gb|EFR00785.1| pumilio domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 1018
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 111/297 (37%), Positives = 169/297 (56%), Gaps = 14/297 (4%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F L + G I + KDQ+GCR+LQR + E +++IF E V ELM DPFGNY
Sbjct: 578 FGNVPLENYSGEIYGMCKDQHGCRYLQRKLEEGVPEHVQIIFRETQMHVVELMTDPFGNY 637
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQRT ++ + LV+I LN HG RA+ K++E ++ P+QI V+ A
Sbjct: 638 LCQKLLEFTNDEQRTGLINIAAP---HLVQIALNQHGTRALQKMIEFISTPEQIQTVIHA 694
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L V L +D NG++VIQ C+ S D +++ + V C + T + GCCVLQ C+++
Sbjct: 695 LSGQVVELVQDLNGNHVIQKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCIDH 754
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ-ITASLLRQLEGHYV----- 376
+ G QR +L+ +I ++ L +D +GNYV+Q++ L I SL L GH+
Sbjct: 755 ASGDQRAKLIEQITKSSYSLVQDPFGNYVIQYICRLTSSTWILESLF--LPGHFAQLSRE 812
Query: 377 ---SFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ S K+ SNV+E+C+ S I E+L + +L F NYVIQ+A+
Sbjct: 813 ASPALSKQKFSSNVIEKCIRTSDFNMRRAFIKEMLSPHELPNMLRDSFANYVIQTAM 869
>gi|302844187|ref|XP_002953634.1| pumilio family protein [Volvox carteri f. nagariensis]
gi|300261043|gb|EFJ45258.1| pumilio family protein [Volvox carteri f. nagariensis]
Length = 271
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 106/240 (44%), Positives = 161/240 (67%), Gaps = 6/240 (2%)
Query: 195 MIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQ 254
M+DPFGNY+VQKL++ CSE+QR + ++ +LV + LNTHG RAV KL+E L++ +
Sbjct: 1 MMDPFGNYLVQKLLDRCSEQQRLEV-----SERGELVTVALNTHGTRAVQKLIETLSSRE 55
Query: 255 QISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCC 314
Q ++ + ALRPG V+L KD NG++V+Q C++ ED++++ + C +AT + GCC
Sbjct: 56 QRAIAIEALRPGVVSLIKDLNGNHVVQRCLQRLGPEDSQFIYDAAVAQCVEVATHRHGCC 115
Query: 315 VLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGH 374
VLQ C++++ AQ++ LV EI +AL+L++D +GNYVVQ++L L + ++ L G
Sbjct: 116 VLQRCIDFATPAQKQALVQEIANHALVLSQDAFGNYVVQYVLELGHLETCTQVVSALRGS 175
Query: 375 YVSFSCNKYGSNVVERCLLESG-EEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVS 433
+ S S K+ SNVVERCL G + + I+ EL+ ++S LL FGNYVIQSAL V+
Sbjct: 176 FSSLSLQKFSSNVVERCLKLGGMDAEREAIVRELIAPTSLSRLLQDGFGNYVIQSALSVT 235
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Query: 156 VALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQ 215
V +A ++GC LQR + + + + E+ + L D FGNYVVQ ++EL E
Sbjct: 105 VEVATHRHGCCVLQRCIDFATPAQKQALVQEIANHALVLSQDAFGNYVVQYVLELGHLET 164
Query: 216 RTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT-LTKDT 274
T+++ L L +++ + LKL + ++ ++V + P +++ L +D
Sbjct: 165 CTQVVSALRGSFSSLSLQKFSSNVVERCLKL--GGMDAEREAIVRELIAPTSLSRLLQDG 222
Query: 275 NGHYVIQ 281
G+YVIQ
Sbjct: 223 FGNYVIQ 229
>gi|296809045|ref|XP_002844861.1| pumilio-family RNA binding protein [Arthroderma otae CBS 113480]
gi|238844344|gb|EEQ34006.1| pumilio-family RNA binding protein [Arthroderma otae CBS 113480]
Length = 1069
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 167/305 (54%), Gaps = 20/305 (6%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F L G I + KDQ+GCR+LQR + E +++IF E V ELM DPFGNY
Sbjct: 616 FGNVPLESYSGEIYGMCKDQHGCRYLQRKLEEGIPEHVQIIFRETQMHVVELMTDPFGNY 675
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQRT ++ + LV+I LN HG RA+ K++E ++ P+QI V+ A
Sbjct: 676 LCQKLLEFTNDEQRTGLINIAAP---HLVQIALNQHGTRALQKMIEFISTPEQIQTVINA 732
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L V L +D NG++VIQ C+ S D +++ + V C + T + GCCVLQ C+++
Sbjct: 733 LSGQVVELVQDLNGNHVIQKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCIDH 792
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQH-----------------LLALRVPQITA 365
+ G QR +L+ +I ++ L +D +GNYV+Q+ ++ L P T
Sbjct: 793 ASGDQRAKLIEQITKSSYSLVQDPFGNYVIQYICTFASLLLSYIIILTGIVDLGEPLFTG 852
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
L +G + S K+ SNV+E+C+ S I E+L + +L F NYV
Sbjct: 853 PLCATFQGSIPALSKQKFSSNVIEKCIRTSDFNMRRAFIKEMLLPHELPNMLRDSFANYV 912
Query: 426 IQSAL 430
IQ+A+
Sbjct: 913 IQTAM 917
>gi|260947166|ref|XP_002617880.1| hypothetical protein CLUG_01339 [Clavispora lusitaniae ATCC 42720]
gi|238847752|gb|EEQ37216.1| hypothetical protein CLUG_01339 [Clavispora lusitaniae ATCC 42720]
Length = 707
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/303 (37%), Positives = 182/303 (60%), Gaps = 17/303 (5%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRT----MSSLPKEE---------IEMIFVEVIDRVC 192
+ L D G+I +L KDQ+GCR LQR M + EE MIF E+ ++
Sbjct: 375 AKLSDFSGDIYSLCKDQHGCRFLQRQLDLGMEAKRSEESGVLSNEVAATMIFNEIYMKIV 434
Query: 193 ELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTN 252
ELM DPFGNY++QKL E S +QR L+++ N +L+RI L+ HG RA+ KL+E +
Sbjct: 435 ELMTDPFGNYLIQKLFENVSADQR---LILVKNAAPELIRIALDPHGTRALQKLVECIDT 491
Query: 253 PQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSG 312
++ L++ +L P V L++D NG++V+Q C++ ED +++ + +++C IAT + G
Sbjct: 492 KEESQLIINSLSPHIVPLSRDLNGNHVVQKCLQELKAEDNQFIFDAASEHCIEIATHRHG 551
Query: 313 CCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLE 372
CCVLQ C+++ +QR++L ++ NA L+ D +GNYVVQ++L+ + +L +
Sbjct: 552 CCVLQRCLDHGNSSQRKQLSLKVAENATKLSLDPFGNYVVQYVLSRGDEESITIVLNHIR 611
Query: 373 GHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLV 432
+ +S S +K+GSNV+E+ L + + I + L S SMLL FGNYV+Q++L V
Sbjct: 612 ANVISLSLHKFGSNVIEKS-LRINKLTNEVIAVLLENSDKFSMLLNDAFGNYVLQTSLDV 670
Query: 433 SKV 435
+
Sbjct: 671 ASA 673
>gi|8778970|gb|AAF79885.1|AC021198_5 Contains similarity to a putative RNA-binding protein AAF18550
gi|6587864 from Arabidopsis thaliana BAC T11I11
gb|AC012680. It contains Pumilio-family RNA binding
domains PF|00806 [Arabidopsis thaliana]
Length = 559
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/323 (36%), Positives = 188/323 (58%), Gaps = 34/323 (10%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
D S+ ++ G++ +A+DQ GCR LQ+ + + ++IF+E+ID V EL +DP GNY
Sbjct: 206 LDLVSMVEIYGSVNLMARDQIGCRALQKLVEEGTVLDSKVIFLEIIDHVVELSMDPLGNY 265
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+VQKL+ + EEQRT I+ +LT+ +L++ICLNT+G R + K+++ + QQI+LV +A
Sbjct: 266 IVQKLLVVSDEEQRTMIVSVLTSKPRELIKICLNTNGTRVIQKMIKTVKTKQQIALVKSA 325
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTK----------------------------- 293
L PG + L D+NG++V+Q C++ D K
Sbjct: 326 LEPGFLVLVNDSNGYHVLQSCLEFLVPNDNKLRLTKLSHILISFLLFLTYVSSDECCEIW 385
Query: 294 --YLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYV 351
+++ + C +AT + GC VLQ + + G Q ERLVAEI ++L L++D +GNYV
Sbjct: 386 CQFVVEAATEYCAQLATHQYGCYVLQCSLINTVGLQHERLVAEISRDSLRLSQDPFGNYV 445
Query: 352 VQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSP 411
VQ L+ +V + +LL H + + K+ S+V+E+CL + E ++ I+ ELL P
Sbjct: 446 VQCLIDQQVSSV--NLLLPFRTHCIELATQKFSSHVIEKCLRKYPESRA-EIVRELLSYP 502
Query: 412 NVSMLLMHPFGNYVIQSALLVSK 434
N LL P+ NYVIQ+AL V+K
Sbjct: 503 NFEQLLQDPYANYVIQTALSVTK 525
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 259 VLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQH 318
++A + ++ L++D G+YV+Q + + LL +C +AT K V++
Sbjct: 425 LVAEISRDSLRLSQDPFGNYVVQCLIDQ--QVSSVNLLLPFRTHCIELATQKFSSHVIEK 482
Query: 319 CV-EYSKGAQRERLVAEIIA--NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHY 375
C+ +Y + R +V E+++ N L +D Y NYV+Q L++ + A L+ +++ +
Sbjct: 483 CLRKYPES--RAEIVRELLSYPNFEQLLQDPYANYVIQTALSVTKGAVRARLVEKVK-RF 539
Query: 376 VSFSCNKYGSNVVERCLLE 394
N Y + + +L+
Sbjct: 540 GKLQSNPYCKKIFSKTILK 558
>gi|213405357|ref|XP_002173450.1| pumilio domain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212001497|gb|EEB07157.1| pumilio domain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 532
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 113/276 (40%), Positives = 171/276 (61%), Gaps = 3/276 (1%)
Query: 155 IVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEE 214
I+AL DQ GCR LQR + S I+ IF + + LM+D FGNY+ QKL E ++
Sbjct: 217 ILALCHDQLGCRSLQRVLESNDPLVIDKIFRTTYEFIPNLMVDAFGNYLCQKLFEHANDF 276
Query: 215 QRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDT 274
QRT + ++++ +LV I LN HG RA+ K+LE ++ P+QI V+ +L+ V L KD
Sbjct: 277 QRTAFVKVISS---KLVPISLNMHGTRALQKVLELVSLPEQIDCVVKSLQNNVVLLIKDL 333
Query: 275 NGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAE 334
NG++VIQ C+ FS ED++++ + + N ++T + GCCV+Q C +++ AQRE LV
Sbjct: 334 NGNHVIQKCLNQFSSEDSQFIYSAICRNIVEVSTHRHGCCVVQRCFDHASPAQREMLVLH 393
Query: 335 IIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLE 394
II AL L +D +GNYVVQ++L L+ P T +++R+ S K+ SNV+E+ L
Sbjct: 394 IIPVALELVQDAFGNYVVQYVLDLKEPVYTDAVIRKFLHKVRMLSVQKFSSNVMEKSLSM 453
Query: 395 SGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ +E +I ELL ++S LL F NYV+Q+AL
Sbjct: 454 ASDELRALLIDELLDKKHLSRLLKDQFANYVVQTAL 489
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 108/229 (47%), Gaps = 9/229 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMS--SLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
++ + +V ++ + +G R LQ+ + SLP E+I+ + + + V L+ D GN+V+Q
Sbjct: 282 VKVISSKLVPISLNMHGTRALQKVLELVSLP-EQIDCVVKSLQNNVVLLIKDLNGNHVIQ 340
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
K + S E I + + +V + + HG V + ++ + Q+ LVL + P
Sbjct: 341 KCLNQFSSEDSQFIYSAICRN---IVEVSTHRHGCCVVQRCFDHASPAQREMLVLHII-P 396
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
A+ L +D G+YV+QY + T ++ + ++ K V++ + +
Sbjct: 397 VALELVQDAFGNYVVQYVLDLKEPVYTDAVIRKFLHKVRMLSVQKFSSNVMEKSLSMASD 456
Query: 326 AQRERLVAEIIANALL--LAEDCYGNYVVQHLLALRVPQITASLLRQLE 372
R L+ E++ L L +D + NYVVQ L P+ A + ++
Sbjct: 457 ELRALLIDELLDKKHLSRLLKDQFANYVVQTALECASPEQRAKMFASIK 505
>gi|413956754|gb|AFW89403.1| hypothetical protein ZEAMMB73_540172 [Zea mays]
Length = 676
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 134/367 (36%), Positives = 201/367 (54%), Gaps = 31/367 (8%)
Query: 77 PLVENGFFS--HPCQEAEPINQDSSILNLLHNHNFDGLRSNGNELSSVPRNQWMSSLSLK 134
P+ +NGF +PC+ +S++ FD N E R Q +SS +L+
Sbjct: 305 PMADNGFGRGRNPCE--------NSLM-------FDKKNMNSLEREKERRFQRVSSRTLR 349
Query: 135 RNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCEL 194
N + G+I +AKDQ CR+LQ + K +++IF +I+ + +L
Sbjct: 350 FNNLVPVK---------GGSIYHMAKDQNWCRYLQDKLLE-GKHHVDVIFEGIINHIADL 399
Query: 195 MIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDF-QLVRICLNTHGIRAVLKLLENLTNP 253
MI FGNY+ Q++VE+C E Q RI+L+LT QL+ + LNTHG R V KL+E +++
Sbjct: 400 MISSFGNYLAQEIVEVCDEGQMLRIILVLTQYPLKQLIAVSLNTHGTRVVQKLIEKVSSR 459
Query: 254 QQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGC 313
+QI L+++AL+P + L D NGH+VIQ C+ +F ED K++ A NC +A GC
Sbjct: 460 EQIMLIISALQPSFMLLVNDHNGHHVIQRCLVNFGVEDNKFIFEGAAANCLNMAVHCHGC 519
Query: 314 CVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEG 373
VLQ C++ ++G L+ EI + LA+D +GNYVVQ +L +P A L EG
Sbjct: 520 FVLQSCIK-ARGRYLANLIMEICLHGFELAQDPFGNYVVQCVLEQEIPSANAHLASLFEG 578
Query: 374 HYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALL 431
YV S + SNVVE+CL+ ++ II EL L + LL F NYV ++AL
Sbjct: 579 KYVYLSKQQGSSNVVEKCLMFFPDDAKAVIIQELLMLSGSDFEQLLQDRFANYVFRTALD 638
Query: 432 VSKVRLF 438
++ RL+
Sbjct: 639 HTRGRLY 645
>gi|399219033|emb|CCF75920.1| unnamed protein product [Babesia microti strain RI]
Length = 546
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 110/275 (40%), Positives = 167/275 (60%), Gaps = 6/275 (2%)
Query: 158 LAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRT 217
+AKDQ GCR LQ+++ +P +E+I EV+D + +LM DPFGNY+ QKL+ +CSE+Q +
Sbjct: 208 MAKDQSGCRLLQKSLDDIPAA-LEIILKEVLDNLVDLMTDPFGNYLCQKLMVVCSEKQLS 266
Query: 218 RILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGH 277
++ L N+ LV+I LN HG RAV KL+E + + ++ L G + L KD NG+
Sbjct: 267 LLINALWNN---LVQISLNMHGTRAVQKLIEIVKTRENTQYLITILEGGVLDLIKDLNGN 323
Query: 278 YVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA 337
+VIQ C+ D +++ + + +NC +AT + GCCV+Q C++ + QR LV I+
Sbjct: 324 HVIQKCLLCLPSTDCQFIYDAMENNCVELATHRHGCCVMQRCIDSANLEQRASLVENIVD 383
Query: 338 NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGE 397
N L+L ED +GNYVVQ+++ L+ I +L L + + K+ SNVVER L+ +
Sbjct: 384 NTLVLVEDAFGNYVVQYVMKLKDETINCKILELLLPNLYELAKQKFSSNVVERLLIYGPD 443
Query: 398 EQSTRIIIELLRSP--NVSMLLMHPFGNYVIQSAL 430
E I+ LL P ML++ P+GNYVIQ L
Sbjct: 444 EVRKSIVETLLNEPPEAFKMLILDPYGNYVIQRML 478
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 141 DSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEE----IEMIFVEVIDRVCELMI 196
++ +C L L N+ LAK ++ ++R + P E +E + E + L++
Sbjct: 407 ETINCKILELLLPNLYELAKQKFSSNVVERLLIYGPDEVRKSIVETLLNEPPEAFKMLIL 466
Query: 197 DPFGNYVVQKLVELCSEEQRTRILLML 223
DP+GNYV+Q+++ E+ IL M+
Sbjct: 467 DPYGNYVIQRMLSFTRGEELNSILNMI 493
>gi|159471610|ref|XP_001693949.1| puf protein [Chlamydomonas reinhardtii]
gi|158277116|gb|EDP02885.1| puf protein [Chlamydomonas reinhardtii]
Length = 273
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 107/241 (44%), Positives = 163/241 (67%), Gaps = 6/241 (2%)
Query: 195 MIDPFGNYVVQKLVELCSEEQRTRILLMLTNDD-FQLVRICLNTHGIRAVLKLLENLTNP 253
M+DPFGNY+VQKL++ CSE+QR L ++ D +LV + LNTHG RAV KL+E L++
Sbjct: 1 MVDPFGNYLVQKLLDRCSEQQR----LEVSGDRRGELVSVALNTHGTRAVQKLIETLSSR 56
Query: 254 QQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGC 313
+Q ++ + ALRPG V+L KD NG++V+Q C++ ED++++ + C +AT + GC
Sbjct: 57 EQRAIAIEALRPGVVSLIKDLNGNHVVQRCLQRLGPEDSQFIYDAAVACCVEVATHRHGC 116
Query: 314 CVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEG 373
CVLQ C++++ Q++ LV E+ +AL+L++D +GNYVVQ++L L A+++ L G
Sbjct: 117 CVLQRCIDFATPGQKQALVMEVARHALVLSQDAFGNYVVQYVLELGHLDSCAAVVVALRG 176
Query: 374 HYVSFSCNKYGSNVVERCLLESGEEQSTRIII-ELLRSPNVSMLLMHPFGNYVIQSALLV 432
+ S S K+ SNVVERCL G + +I+ EL++ N+S LL +GNYVIQSAL V
Sbjct: 177 SFCSLSLQKFSSNVVERCLKLGGLDAERELIVRELIQPNNLSRLLQDGYGNYVIQSALSV 236
Query: 433 S 433
+
Sbjct: 237 T 237
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 21/136 (15%)
Query: 156 VALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQ 215
V +A ++GC LQR + + + + +EV L D FGNYVVQ ++EL +
Sbjct: 107 VEVATHRHGCCVLQRCIDFATPGQKQALVMEVARHALVLSQDAFGNYVVQYVLELGHLDS 166
Query: 216 RTRILLMLTNDDFQL---------VRICLNTHGIRAVLKLL-ENLTNPQQISLVLAALRP 265
+++ L L V CL G+ A +L+ L P +S +L
Sbjct: 167 CAAVVVALRGSFCSLSLQKFSSNVVERCLKLGGLDAERELIVRELIQPNNLSRLL----- 221
Query: 266 GAVTLTKDTNGHYVIQ 281
+D G+YVIQ
Sbjct: 222 ------QDGYGNYVIQ 231
>gi|19113974|ref|NP_593062.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|1351595|sp|Q09829.1|YAD3_SCHPO RecName: Full=Pumilio domain-containing protein C4G8.03c
gi|1022348|emb|CAA91204.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe]
Length = 780
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 106/281 (37%), Positives = 164/281 (58%), Gaps = 3/281 (1%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G++ + KDQYGCR+LQ+ + PK + F E+ V +LMIDPFGNY+ QKL S
Sbjct: 465 GHLSTICKDQYGCRYLQKLLDENPKVNASLFFPEIRQSVVQLMIDPFGNYMCQKLFVYAS 524
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
EQ+ L ML +V IC N +G R++ +++ LT+ +QISL+L + P TL
Sbjct: 525 REQK---LSMLNGIGEGIVDICSNLYGTRSMQNIIDKLTSNEQISLLLKIIIPSLTTLAC 581
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D NG +V+Q C+ F E + L + +N +AT++ GCC+LQ C++ + G +ERLV
Sbjct: 582 DNNGTHVLQKCIAKFPPEKLEPLFLSMEENLITLATNRHGCCILQRCLDRTNGDIQERLV 641
Query: 333 AEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCL 392
II + LLL ++ YGNY+VQH+L L + T ++ + G+ S K+ SN +E+C+
Sbjct: 642 NSIIKSCLLLVQNAYGNYLVQHVLELNIQPYTERIIEKFFGNICKLSLQKFSSNAIEQCI 701
Query: 393 LESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVS 433
+ +++ E L PN+ LL + NYV+Q L V+
Sbjct: 702 RTASPSTREQMLQEFLSFPNIEQLLDDCYANYVMQRFLNVA 742
>gi|50552736|ref|XP_503778.1| YALI0E10395p [Yarrowia lipolytica]
gi|49649647|emb|CAG79369.1| YALI0E10395p [Yarrowia lipolytica CLIB122]
Length = 566
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/277 (41%), Positives = 167/277 (60%), Gaps = 11/277 (3%)
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSE 213
+I AL KDQ+GCR+LQR + P + +IF + V ELM DPFGNY+ QKL+E CS
Sbjct: 259 DIFALCKDQHGCRYLQRKLEEEPYY-LNLIFEQTHSHVVELMTDPFGNYLCQKLLENCSV 317
Query: 214 EQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKD 273
Q T +++ LV++ LN HG RA+ K+++ +TN +QI +++ AL V L +D
Sbjct: 318 AQTT---VLIRTAAPSLVQVALNQHGTRALQKMIDYVTNDEQIEIIVQALERNVVRLIQD 374
Query: 274 TNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVA 333
NG++VIQ C+ + DT ++ V+ N +AT + GCCVLQ CV+Y+ QRE L+
Sbjct: 375 LNGNHVIQKCLNRLNSCDTNFIYRAVSQNLVVVATHRHGCCVLQRCVDYADVLQREMLIG 434
Query: 334 EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLL 393
I +AL L D +GNYV Q++L +V +RQ GH V+ S K+ SNV+E+ L
Sbjct: 435 VITKHALQLVCDPFGNYVTQYVLGEQV-------IRQFVGHVVALSMQKFSSNVIEKSLK 487
Query: 394 ESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ E +I E+ SP + LL +GNYV+Q+AL
Sbjct: 488 VASYELRAVLIAEICASPLLPKLLSDCYGNYVVQTAL 524
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 5/210 (2%)
Query: 230 LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSH 289
+ +C + HG R + + LE P ++L+ V L D G+Y+ Q +++ S
Sbjct: 260 IFALCKDQHGCRYLQRKLEE--EPYYLNLIFEQTHSHVVELMTDPFGNYLCQKLLENCSV 317
Query: 290 EDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGAQRERLVAEIIANALLLAEDCYG 348
T L+ A + +A ++ G LQ ++Y + Q E +V + N + L +D G
Sbjct: 318 AQTTVLIRTAAPSLVQVALNQHGTRALQKMIDYVTNDEQIEIIVQALERNVVRLIQDLNG 377
Query: 349 NYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL 408
N+V+Q L T + R + + V + +++G V++RC+ + Q +I +
Sbjct: 378 NHVIQKCLNRLNSCDTNFIYRAVSQNLVVVATHRHGCCVLQRCVDYADVLQREMLIGVIT 437
Query: 409 RSPNVSMLLMHPFGNYVIQSALLVSKVRLF 438
+ + L+ PFGNYV Q L +R F
Sbjct: 438 K--HALQLVCDPFGNYVTQYVLGEQVIRQF 465
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
R + N+V +A ++GC LQR + + EM+ + +L+ DPFGNYV Q ++
Sbjct: 398 RAVSQNLVVVATHRHGCCVLQRCVDYADVLQREMLIGVITKHALQLVCDPFGNYVTQYVL 457
>gi|328353330|emb|CCA39728.1| Pumilio homolog 1 [Komagataella pastoris CBS 7435]
Length = 600
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/368 (35%), Positives = 198/368 (53%), Gaps = 24/368 (6%)
Query: 89 QEAEPINQDSSI--LNLLHNHNFDGLRSNGNELSSV-PRNQWMSSLSLKRNQWLQDSFDC 145
Q A N D S+ L+L +N+N D + + + P+ L + N
Sbjct: 170 QPAVTFNIDKSLASLSLQNNNNLDTFNPTSSSTTPIYPKKSHEKELVTRLN--------S 221
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+ L IV+L+KDQYGCR LQR + IF ++ ELM+DPFGNY+VQ
Sbjct: 222 TPFEALTDEIVSLSKDQYGCRFLQRKLDENSTMYFPTIFGQICAHASELMVDPFGNYLVQ 281
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+ C+ ++ L+L L + LN HG RA+ K+++ L Q SLV +L+
Sbjct: 282 KLLNYCTNHEKD---LLLEQSAPDLFSVALNQHGTRALQKIIDCLGTNYQFSLVRDSLKN 338
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
V L +D NG++V+Q C+ FSH+D +++++ + + I+T K GCCVLQ C+
Sbjct: 339 HVVELIQDLNGNHVVQKCINKFSHKDFQFIIDAICLHIVRISTHKHGCCVLQKCLNKCNQ 398
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
Q +L EIIANA++L +D +GNYVVQ+LL++ I L+ Q+ S K+ S
Sbjct: 399 QQLVQLGDEIIANAIVLMKDQFGNYVVQYLLSMNNLPINEKLVYQILPSISMLSVQKFSS 458
Query: 386 NVVERCLLESGEEQSTRIII-ELLRSPNVSMLLMHPFGNYVIQSALLVS----KVRLFSS 440
NV+E+CL + S ++ E+LR N++ L+ +GNYV+Q+A+ V+ K RL
Sbjct: 459 NVMEKCLKNAPNRSSQNAMLEEILRPQNLNALIKDQYGNYVVQTAIDVADDEYKFRL--- 515
Query: 441 PPISVCKP 448
I KP
Sbjct: 516 --IQTVKP 521
>gi|242036643|ref|XP_002465716.1| hypothetical protein SORBIDRAFT_01g044430 [Sorghum bicolor]
gi|241919570|gb|EER92714.1| hypothetical protein SORBIDRAFT_01g044430 [Sorghum bicolor]
Length = 716
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/364 (36%), Positives = 197/364 (54%), Gaps = 37/364 (10%)
Query: 77 PLVENGFFSHPCQEAEPINQDSSILNLLHNHNFDGLRSNGNELSSVPRNQWMSSLSLKRN 136
P+ +NGF + + E + D+S++ FDG N E R Q +++ +L+
Sbjct: 356 PVADNGF-ARGRNQFEAFHCDNSLM-------FDGKNMNFLERERERRFQRVNNRALELG 407
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
FD + +R G+I +AKDQ GCR+LQ K ++ IF +I+ + +LMI
Sbjct: 408 STRTLRFD-NVVRVKEGSIYHMAKDQNGCRYLQDKFLE-GKHHVDAIFEGIINHIADLMI 465
Query: 197 DPFGNYVVQKLVELCSEEQRTRILLMLTNDDF-QLVRICLNTHGIRAVLKLLENLTNPQQ 255
FGNY+VQK++E+C E QR RI+L+LT D QL+ I LNTHG R V +L+E + + Q
Sbjct: 466 SSFGNYLVQKMLEVCDEGQRLRIILVLTQDPVKQLIAISLNTHGTRVVQRLIETVRSRDQ 525
Query: 256 ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCV 315
I L+++AL+P + L D NG++VIQ C+ +F ED K
Sbjct: 526 IILIISALQPNFMLLVNDPNGNHVIQKCLTNFGAEDNK---------------------- 563
Query: 316 LQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHY 375
C+ ++G + L+ EI A LA+D +GNYVVQ++L L++P A L Q EG Y
Sbjct: 564 --RCISNARGVYQANLIVEICARGFELAQDPFGNYVVQYVLELKIPSANAHLASQFEGKY 621
Query: 376 VSFSCNKYGSNVVERCLLESGEEQSTRIIIE--LLRSPNVSMLLMHPFGNYVIQSALLVS 433
+ S K SNVVERCL ++ I+ E LL + LL P+ NYVI +ALL +
Sbjct: 622 IYLSKQKVSSNVVERCLKFFPDDAKAVIVHELLLLSGSHFEQLLQDPYANYVIYTALLHT 681
Query: 434 KVRL 437
K L
Sbjct: 682 KGHL 685
>gi|254571113|ref|XP_002492666.1| Member of the PUF protein family, which is defined by the presence
of Pumilio homology domains [Komagataella pastoris
GS115]
gi|238032464|emb|CAY70487.1| Member of the PUF protein family, which is defined by the presence
of Pumilio homology domains [Komagataella pastoris
GS115]
Length = 588
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/368 (35%), Positives = 198/368 (53%), Gaps = 24/368 (6%)
Query: 89 QEAEPINQDSSI--LNLLHNHNFDGLRSNGNELSSV-PRNQWMSSLSLKRNQWLQDSFDC 145
Q A N D S+ L+L +N+N D + + + P+ L + N
Sbjct: 158 QPAVTFNIDKSLASLSLQNNNNLDTFNPTSSSTTPIYPKKSHEKELVTRLN--------S 209
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+ L IV+L+KDQYGCR LQR + IF ++ ELM+DPFGNY+VQ
Sbjct: 210 TPFEALTDEIVSLSKDQYGCRFLQRKLDENSTMYFPTIFGQICAHASELMVDPFGNYLVQ 269
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+ C+ ++ L+L L + LN HG RA+ K+++ L Q SLV +L+
Sbjct: 270 KLLNYCTNHEKD---LLLEQSAPDLFSVALNQHGTRALQKIIDCLGTNYQFSLVRDSLKN 326
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
V L +D NG++V+Q C+ FSH+D +++++ + + I+T K GCCVLQ C+
Sbjct: 327 HVVELIQDLNGNHVVQKCINKFSHKDFQFIIDAICLHIVRISTHKHGCCVLQKCLNKCNQ 386
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
Q +L EIIANA++L +D +GNYVVQ+LL++ I L+ Q+ S K+ S
Sbjct: 387 QQLVQLGDEIIANAIVLMKDQFGNYVVQYLLSMNNLPINEKLVYQILPSISMLSVQKFSS 446
Query: 386 NVVERCLLESGEEQSTRIII-ELLRSPNVSMLLMHPFGNYVIQSALLVS----KVRLFSS 440
NV+E+CL + S ++ E+LR N++ L+ +GNYV+Q+A+ V+ K RL
Sbjct: 447 NVMEKCLKNAPNRSSQNAMLEEILRPQNLNALIKDQYGNYVVQTAIDVADDEYKFRL--- 503
Query: 441 PPISVCKP 448
I KP
Sbjct: 504 --IQTVKP 509
>gi|344300994|gb|EGW31306.1| hypothetical protein SPAPADRAFT_61876 [Spathaspora passalidarum
NRRL Y-27907]
Length = 465
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/329 (35%), Positives = 194/329 (58%), Gaps = 17/329 (5%)
Query: 105 HNHNFDGLRSNGNELSSVPRNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYG 164
H NFDG+ ++ + PR +S + + L D G+I+ L KDQ+G
Sbjct: 118 HRGNFDGMNTHRKN-NGKPRRGDDAS-----------KYANAKLSDFVGDILNLCKDQHG 165
Query: 165 CRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLT 224
CR LQR + L + +IF E+ ++ ELMIDPFGNY++QKL E + EQR ++++
Sbjct: 166 CRFLQRQLE-LDEGAATIIFQEIYFKIVELMIDPFGNYLIQKLFEHITVEQR---IVLVK 221
Query: 225 NDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCV 284
N + ++I ++ HG RA+ KL+E ++ ++ L++ AL+P V L++D NG++V+Q C+
Sbjct: 222 NASGEFMKISMDPHGTRALQKLIECISTAEESKLIIEALQPHIVILSRDLNGNHVVQKCL 281
Query: 285 KHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAE 344
++ D +++ + V NC IAT + GCCVLQ C+++ QR++L +I NA LA
Sbjct: 282 QNLKTSDNQFIFDAVCANCLAIATHRHGCCVLQRCLDHGDPLQRQQLSLKIAENATKLAI 341
Query: 345 DCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRII 404
D +GNYVVQ++L+ + +L ++ + ++ S +K+GSNV+E+ L + + I
Sbjct: 342 DPFGNYVVQYVLSHGDDKSIEIILNHIKSNTIALSLHKFGSNVIEKS-LRINKLSNQLIE 400
Query: 405 IELLRSPNVSMLLMHPFGNYVIQSALLVS 433
+ LL LL FGNYV+Q++L V+
Sbjct: 401 VLLLNESRFEELLNDGFGNYVLQTSLDVA 429
>gi|294654650|ref|XP_456710.2| DEHA2A08778p [Debaryomyces hansenii CBS767]
gi|199429043|emb|CAG84666.2| DEHA2A08778p [Debaryomyces hansenii CBS767]
Length = 808
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 187/321 (58%), Gaps = 22/321 (6%)
Query: 134 KRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTM------SSLPKEEIE------ 181
KR + + L D G I +L KDQ+GCR LQR + +S P ++E
Sbjct: 459 KRKGDDASKYTNAKLEDFTGQIYSLCKDQHGCRFLQRQLDLGREAASNPNADLENTQILT 518
Query: 182 ------MIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICL 235
MIF E+ ++ ELM DPFGNY++QKL E S +QR ++++ N + +RI L
Sbjct: 519 NDIAATMIFNEIYLKIIELMTDPFGNYLIQKLFENVSADQR---IILVKNASPEFIRIAL 575
Query: 236 NTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYL 295
+ HG RA+ KL+E +T ++ L++ +L P V L++D NG++V+Q C++ E+ +++
Sbjct: 576 DPHGTRALQKLIECITTEEESRLIINSLSPRIVALSRDLNGNHVVQKCLQRLKPEENQFI 635
Query: 296 LNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHL 355
+ +C IAT + GCCVLQ C+++ AQR++L ++ NA L+ D +GNYVVQ++
Sbjct: 636 FETASLHCNEIATHRHGCCVLQRCLDHGNLAQRKQLSLKVAENATNLSLDPFGNYVVQYV 695
Query: 356 LALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSM 415
L+ + +L ++ + VS S +K+GSNV+E+ L + + I + LL S
Sbjct: 696 LSRGDDESIRIILDHIKANVVSLSLHKFGSNVIEKS-LRINKLTDSLIDVLLLNKERFSE 754
Query: 416 LLMHPFGNYVIQSALLVSKVR 436
+L FGNYV+Q++L V+ VR
Sbjct: 755 MLNDAFGNYVLQTSLDVANVR 775
>gi|344231266|gb|EGV63148.1| ARM repeat-containing protein [Candida tenuis ATCC 10573]
Length = 387
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 185/306 (60%), Gaps = 26/306 (8%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTM------------SSLPKEEIE--MIFVEVIDRV 191
+ L D G I +L KDQ+GCR LQR + +++ +I MIF E+ ++
Sbjct: 53 AKLEDFTGEIFSLCKDQHGCRFLQRQLDLGKDIENKQNANNILSSDIAATMIFNEIYLKI 112
Query: 192 CELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLT 251
ELMIDPFGNY++QKL E S +QR ++++ N +RI L+ HG RA+ KL+E ++
Sbjct: 113 IELMIDPFGNYLIQKLFENVSVDQR---IILVKNAAPDFIRIALDPHGTRALQKLVECIS 169
Query: 252 NPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKS 311
+ L++ L P V+L++D NG++V+Q C++ S + +++ + + +C IAT +
Sbjct: 170 TEAECKLIIDNLSPHIVSLSRDLNGNHVVQKCLQKLSSKQNQFIFDTASSHCNDIATHRH 229
Query: 312 GCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQL 371
GCCVLQ C++Y AQR++L ++I NA L+ D +GNYVVQ++L+ Q A +L +
Sbjct: 230 GCCVLQRCLDYGNAAQRKQLSSKIAENATNLSLDPFGNYVVQYVLSRGDEQSVAIILNHI 289
Query: 372 EGHYVSFSCNKYGSNVVERCL----LESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQ 427
+ H + S +K+GSNV+E+ L L +G Q+ L+ + + LL PFGNYV+Q
Sbjct: 290 KSHLIVLSLHKFGSNVIEKSLRISKLTNGLVQAL-----LMNADHFQDLLNDPFGNYVLQ 344
Query: 428 SALLVS 433
++L V+
Sbjct: 345 TSLDVA 350
>gi|169596899|ref|XP_001791873.1| hypothetical protein SNOG_01219 [Phaeosphaeria nodorum SN15]
gi|160707392|gb|EAT90868.2| hypothetical protein SNOG_01219 [Phaeosphaeria nodorum SN15]
Length = 1017
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 163/279 (58%), Gaps = 3/279 (1%)
Query: 152 RGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELC 211
R I +L KDQ+GCR LQ+ + E +++IF E V ELM DPFGNY+ QKL+E
Sbjct: 601 RQEIYSLCKDQHGCRFLQKKLEERVPESLQIIFDETAPHVVELMTDPFGNYLCQKLLEFA 660
Query: 212 SEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLT 271
++EQR ++ N +V I LN HG RA+ K++E ++ +Q +++ AL V L
Sbjct: 661 NDEQRN---TLVRNACPAMVSIALNQHGTRALQKMIEFISTEEQTEMIIQALSGQVVDLI 717
Query: 272 KDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERL 331
+D NG++VIQ C+ H + +++ + V ++C + T + GCCVLQ C++++ G Q+ L
Sbjct: 718 QDLNGNHVIQKCLNHLKSSEAQFIFDAVGEHCVIVGTHRHGCCVLQRCIDHASGYQKVDL 777
Query: 332 VAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERC 391
V +I A++ L +D +GNYVVQ++L L T + G V S K+ SNV+E+C
Sbjct: 778 VRKITAHSFHLVQDPFGNYVVQYILDLNDAAFTTPMCEGFRGKVVELSKQKFSSNVIEKC 837
Query: 392 LLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ + +I EL + L+ +GNYV+Q+AL
Sbjct: 838 IRCAEMSAKQMLIEELCDVEELEHLMRDSYGNYVVQTAL 876
>gi|401406880|ref|XP_003882889.1| hypothetical protein NCLIV_026460 [Neospora caninum Liverpool]
gi|325117305|emb|CBZ52857.1| hypothetical protein NCLIV_026460 [Neospora caninum Liverpool]
Length = 1537
Score = 204 bits (520), Expect = 5e-50, Method: Composition-based stats.
Identities = 118/287 (41%), Positives = 174/287 (60%), Gaps = 8/287 (2%)
Query: 152 RGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELC 211
+GNI +A+DQ GCR LQR +S EE+E I +EV++ V L++DPFGNY+VQK+VE C
Sbjct: 1090 KGNIEMIARDQIGCRMLQRKLSDANPEEVEAIRLEVLECVVVLLVDPFGNYLVQKVVEQC 1149
Query: 212 SEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLT----NPQQISLVLAALRPGA 267
E Q +L ++ +LV ICL+ HG RAV KL+E N + +LAALRP
Sbjct: 1150 EEPQ---LLQLVRKIRPRLVDICLSPHGTRAVQKLIEVCAGLPINSTATNELLAALRPSI 1206
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L KD N ++V+Q + F +++ +V +C I+T++ GCCV+Q C++ +
Sbjct: 1207 VLLAKDVNANHVVQKILSSFPAARCEFVFAQVKKHCVEISTERHGCCVMQRCIDAAPPRA 1266
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ ++ EI ANAL L +D +GNYVVQ++L L++ ++ L GH S K+ SNV
Sbjct: 1267 KSEILQEIAANALELMQDAFGNYVVQYVLDLQIDGFNGAVTGALRGHIRELSMQKFSSNV 1326
Query: 388 VERCLLESGEEQSTRIIIELLRS-PNVSMLLMHPFGNYVIQSALLVS 433
VE+CL+ EQ + I+ ELL + +L+ + NYVIQ AL VS
Sbjct: 1327 VEKCLMLGTPEQRSLIVDELLADGEGLKDMLLDSYANYVIQRALTVS 1373
Score = 54.7 bits (130), Expect = 9e-05, Method: Composition-based stats.
Identities = 57/250 (22%), Positives = 97/250 (38%), Gaps = 51/250 (20%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L LR +IV LAKD +Q+ +SS P E +F +V E+ + G V+Q+
Sbjct: 1199 LAALRPSIVLLAKDVNANHVVQKILSSFPAARCEFVFAQVKKHCVEISTERHGCCVMQRC 1258
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
++ ++ IL Q+I+ A
Sbjct: 1259 IDAAPPRAKSEIL---------------------------------QEIA-------ANA 1278
Query: 268 VTLTKDTNGHYVIQYC----VKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
+ L +D G+YV+QY + F+ T L + + ++ K V++ C+
Sbjct: 1279 LELMQDAFGNYVVQYVLDLQIDGFNGAVTGALRGHIRE----LSMQKFSSNVVEKCLMLG 1334
Query: 324 KGAQRERLVAEIIANALLLAE---DCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSC 380
QR +V E++A+ L + D Y NYV+Q L + P LL ++
Sbjct: 1335 TPEQRSLIVDELLADGEGLKDMLLDSYANYVIQRALTVSSPAAQQQLLLVIQPCLSQLRQ 1394
Query: 381 NKYGSNVVER 390
+ GS V +
Sbjct: 1395 TQPGSRVAHK 1404
>gi|221486916|gb|EEE25162.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 685
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 119/283 (42%), Positives = 170/283 (60%), Gaps = 5/283 (1%)
Query: 152 RGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELC 211
+GNI +A+DQ GCR LQR +S EE+E I +EV++ V L++DPFGNY+VQK+VE C
Sbjct: 183 KGNIEMIARDQIGCRMLQRKLSEASPEEVEAIRLEVLECVVVLLVDPFGNYLVQKVVEEC 242
Query: 212 SEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLT 271
E Q +L ++ +LV ICL+ HG RAV KL+E + L LAALRP V L
Sbjct: 243 EEPQ---LLQLVRKIRPRLVDICLSPHGTRAVQKLIEPAGSAATNEL-LAALRPSVVLLA 298
Query: 272 KDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERL 331
KD N ++V+Q + F ++ +V NC I+T++ GCCV+Q C++ + + +
Sbjct: 299 KDVNANHVVQKILSSFPASRCDFVFAQVKKNCVEISTERHGCCVMQRCIDAAPPRAKSEI 358
Query: 332 VAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERC 391
+ EI ANAL L +D +GNYVVQ +L L++ ++ + GH S K+ SNVVE+C
Sbjct: 359 LQEIAANALELMQDAFGNYVVQCVLDLQIEGFNGAVAGAIRGHIRELSMQKFSSNVVEKC 418
Query: 392 LLESGEEQSTRIIIELL-RSPNVSMLLMHPFGNYVIQSALLVS 433
L+ EQ I+ ELL + LL+ + NYVIQ AL VS
Sbjct: 419 LVLGTPEQRNLIVDELLAEGDGLKDLLLDSYANYVIQRALTVS 461
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 89/225 (39%), Gaps = 45/225 (20%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L LR ++V LAKD +Q+ +SS P + +F +V E+ + G V+Q+
Sbjct: 287 LAALRPSVVLLAKDVNANHVVQKILSSFPASRCDFVFAQVKKNCVEISTERHGCCVMQRC 346
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKL-LENLTNPQQISLVLAALRPG 266
++ ++ IL + + +L++ + ++ VL L +E V A+R
Sbjct: 347 IDAAPPRAKSEILQEIAANALELMQDAFGNYVVQCVLDLQIEGFNGA-----VAGAIR-- 399
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
GH + + ++ FS V++ C+
Sbjct: 400 ---------GH-IRELSMQKFSSN------------------------VVEKCLVLGTPE 425
Query: 327 QRERLVAEIIANALLLAE---DCYGNYVVQHLLALRVPQITASLL 368
QR +V E++A L + D Y NYV+Q L + P LL
Sbjct: 426 QRNLIVDELLAEGDGLKDLLLDSYANYVIQRALTVSSPAAQQQLL 470
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 12/151 (7%)
Query: 297 NEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLL 356
N+ N IA D+ GC +LQ + + + E + E++ ++L D +GNY+VQ ++
Sbjct: 180 NKYKGNIEMIARDQIGCRMLQRKLSEASPEEVEAIRLEVLECVVVLLVDPFGNYLVQKVV 239
Query: 357 -ALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSM 415
PQ+ L+R++ V + +G+ V++ L+E +T ++ LR P+V +
Sbjct: 240 EECEEPQLL-QLVRKIRPRLVDICLSPHGTRAVQK-LIEPAGSAATNELLAALR-PSVVL 296
Query: 416 LLMHPFGNYVIQSALLVSKVRLFSSPPISVC 446
L N+V+Q ++ SS P S C
Sbjct: 297 LAKDVNANHVVQ--------KILSSFPASRC 319
>gi|254570018|ref|XP_002492119.1| Member of the PUF protein family [Komagataella pastoris GS115]
gi|238031916|emb|CAY69839.1| Member of the PUF protein family [Komagataella pastoris GS115]
gi|328351394|emb|CCA37793.1| Pumilio homolog 2 [Komagataella pastoris CBS 7435]
Length = 720
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 183/306 (59%), Gaps = 16/306 (5%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F + L D +G I +L KDQ+GCR LQ+ + K MIF E V ELM DPFGNY
Sbjct: 346 FADAKLEDFQGEIYSLCKDQHGCRFLQKQLDIGGKNAATMIFNETYLSVIELMSDPFGNY 405
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
++QKL++ S +QR + ++ N + VRI L+ HG RA+ KL+E + ++ +++ A
Sbjct: 406 LIQKLLDKVSVDQR---ITLVKNASSKFVRIALDPHGTRALQKLVECIDTEEESEIIIDA 462
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L V+L++D NG++V+Q C++ S +D +++ + D+C IAT + GCCVLQ C+++
Sbjct: 463 LSSHVVSLSRDLNGNHVVQKCLQKLSSKDCQFIFDATCDHCVEIATHRHGCCVLQRCLDH 522
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLA-------LRVPQITASLLRQLEGHY 375
Q L E+ N + L+ D +GNYVVQ++L+ + + A+++ ++
Sbjct: 523 GSKEQCYALSLEVSRNCIPLSFDPFGNYVVQYVLSQNEMIKNINDSKPVANIVAAIKDSI 582
Query: 376 VSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLMHPFGNYVIQSALLV 432
++ S +K+GSNV+E+CL + ++++I+ L + +S LL P+GNYV+Q+AL V
Sbjct: 583 ITLSLHKFGSNVIEKCL---KIPRVSKLVIDQLLETHATKISELLNDPYGNYVLQTALDV 639
Query: 433 SKVRLF 438
S F
Sbjct: 640 STPEEF 645
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 119 LSSVPRNQWMSSLSLKRNQWLQDSFDCSSLRDL----RGNIVALAKDQYGCRHLQR--TM 172
LS P ++ L +N+ +++ D + ++ + +I+ L+ ++G +++ +
Sbjct: 542 LSFDPFGNYVVQYVLSQNEMIKNINDSKPVANIVAAIKDSIITLSLHKFGSNVIEKCLKI 601
Query: 173 SSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVR 232
+ K I+ + ++ EL+ DP+GNYV+Q +++ + E+ R+ +L L+
Sbjct: 602 PRVSKLVIDQLLETHATKISELLNDPYGNYVLQTALDVSTPEEFERLSELLK----PLLP 657
Query: 233 ICLNT-HGIRAVLKLLENLTNP 253
NT HG R + ++ N P
Sbjct: 658 TVRNTPHGKRIMARIQVNGVPP 679
>gi|297795139|ref|XP_002865454.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311289|gb|EFH41713.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 505
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/292 (38%), Positives = 177/292 (60%), Gaps = 8/292 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ + RG++ A+AKD + L T+ KE I+ IF +I +CELM+DP+G VV L
Sbjct: 184 MENRRGSLYAIAKDAVWSKKLLETIYQGTKETIDTIFDRIIVHICELMVDPYGKDVVMLL 243
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNP--QQISLVLAALRP 265
+ C EQ +I+ ++T D FQ V IC + G A+ +LL+++ QI ++ +
Sbjct: 244 IGKCCSEQIIQIVDLVTQDMFQFVNICFDLRGTAAIQELLDSIHKRANDQIPRIMDLINS 303
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
+ L K +N ++I C + F +YLL VA +CY I+ D++GCC+ Q C++ ++
Sbjct: 304 VGLQLAKSSNARFLILSCFRLFPLSHCRYLLEVVAQHCYEISIDQNGCCLYQQCLDKNRV 363
Query: 326 AQ---RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
R+RL++E+I++AL L +CYGNYVVQ+++ L + +L+RQL G+Y + NK
Sbjct: 364 PNPEIRQRLISEVISHALRLCLNCYGNYVVQYIVELNNQHVINALVRQLIGNYAHLARNK 423
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
YGS+VV++ L G + TR+I+ L S + LL+ PFGNYVIQ+A VSK
Sbjct: 424 YGSHVVQKLLRLRGVD--TRLIVVDLLS-QIDTLLLDPFGNYVIQTAWFVSK 472
>gi|156095470|ref|XP_001613770.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148802644|gb|EDL44043.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 1542
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 107/287 (37%), Positives = 170/287 (59%), Gaps = 7/287 (2%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
+ GNI +AKDQ GCR LQR + ++ I+ E +D + ELM+DPFGNY+ QKL+E
Sbjct: 637 EFSGNIFNIAKDQTGCRILQRILERKNPRHVQEIYREALDNIVELMVDPFGNYLCQKLME 696
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
+C+ EQ RI+ + QLV ++ HG R V KL+E + P QI+ AL+ +T
Sbjct: 697 VCTSEQIERIIDAAAD---QLVSASVSVHGTRTVQKLIEMIRTPAQIAKATRALQNSVIT 753
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
L KD NG++V+Q C+ + +++ + +NC ++T + GCCV+Q C++ + Q+
Sbjct: 754 LIKDINGNHVVQKCLVSLTSHQCEFIYKAILNNCVEVSTHRHGCCVIQRCIDSANEQQKA 813
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVE 389
+ I + L L +D +GNYVVQ++L L ++ ++ +L + + K+ SNVVE
Sbjct: 814 LFIRHITDHTLELVQDAFGNYVVQYVLNLGREKVNLDIVHRLLPNLEELATQKFASNVVE 873
Query: 390 RCLLESGEEQSTRIII-ELLRSPNVSM--LLMHPFGNYVIQSALLVS 433
+CL G + +I+I ++LR SM L++ FGNYVIQ AL V+
Sbjct: 874 KCLT-IGSSRCRKILINDILRRGKDSMKKLILDRFGNYVIQRALSVA 919
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 94/209 (44%), Gaps = 4/209 (1%)
Query: 230 LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSH 289
+ I + G R + ++LE NP+ + + V L D G+Y+ Q ++ +
Sbjct: 642 IFNIAKDQTGCRILQRILER-KNPRHVQEIYREALDNIVELMVDPFGNYLCQKLMEVCTS 700
Query: 290 EDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG-AQRERLVAEIIANALLLAEDCYG 348
E + +++ AD + G +Q +E + AQ + + + + L +D G
Sbjct: 701 EQIERIIDAAADQLVSASVSVHGTRTVQKLIEMIRTPAQIAKATRALQNSVITLIKDING 760
Query: 349 NYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL 408
N+VVQ L + + + + V S +++G V++RC+ + E+Q I +
Sbjct: 761 NHVVQKCLVSLTSHQCEFIYKAILNNCVEVSTHRHGCCVIQRCIDSANEQQKALFIRHI- 819
Query: 409 RSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
+ + L+ FGNYV+Q L + + ++
Sbjct: 820 -TDHTLELVQDAFGNYVVQYVLNLGREKV 847
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 90/194 (46%), Gaps = 10/194 (5%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
+ R L+ +++ L KD G +Q+ + SL + E I+ +++ E+ G V+Q+
Sbjct: 743 ATRALQNSVITLIKDINGNHVVQKCLVSLTSHQCEFIYKAILNNCVEVSTHRHGCCVIQR 802
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISL-VLAALRP 265
++ +E+Q+ + +T+ +LV+ + ++ VL L ++++L ++ L P
Sbjct: 803 CIDSANEQQKALFIRHITDHTLELVQDAFGNYVVQYVLNLGR-----EKVNLDIVHRLLP 857
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV----ADNCYGIATDKSGCCVLQHCVE 321
L V++ C+ S K L+N++ D+ + D+ G V+Q +
Sbjct: 858 NLEELATQKFASNVVEKCLTIGSSRCRKILINDILRRGKDSMKKLILDRFGNYVIQRALS 917
Query: 322 YSKGAQRERLVAEI 335
+ + +LV I
Sbjct: 918 VASEPELTKLVEGI 931
>gi|237831871|ref|XP_002365233.1| pumilio-family RNA binding repeat domain-containing protein
[Toxoplasma gondii ME49]
gi|211962897|gb|EEA98092.1| pumilio-family RNA binding repeat domain-containing protein
[Toxoplasma gondii ME49]
Length = 1618
Score = 202 bits (513), Expect = 4e-49, Method: Composition-based stats.
Identities = 118/287 (41%), Positives = 170/287 (59%), Gaps = 8/287 (2%)
Query: 152 RGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELC 211
+GNI +A+DQ GCR LQR +S EE+E I +EV++ V L++DPFGNY+VQK+VE C
Sbjct: 1111 KGNIEMIARDQIGCRMLQRKLSEASPEEVEAIRLEVLECVVVLLVDPFGNYLVQKVVEEC 1170
Query: 212 SEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTN----PQQISLVLAALRPGA 267
E Q +L ++ +LV ICL+ HG RAV KL+E + +LAALRP
Sbjct: 1171 EEPQ---LLQLVRKIRPRLVDICLSPHGTRAVQKLIEVCAGLPAGSAATNELLAALRPSV 1227
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L KD N ++V+Q + F ++ +V NC I+T++ GCCV+Q C++ +
Sbjct: 1228 VLLAKDVNANHVVQKILSSFPASRCDFVFAQVKKNCVEISTERHGCCVMQRCIDAAPPRA 1287
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ ++ EI ANAL L +D +GNYVVQ +L L++ ++ + GH S K+ SNV
Sbjct: 1288 KSEILQEIAANALELMQDAFGNYVVQCVLDLQIEGFNGAVAGAIRGHIRELSMQKFSSNV 1347
Query: 388 VERCLLESGEEQSTRIIIELL-RSPNVSMLLMHPFGNYVIQSALLVS 433
VE+CL+ EQ I+ ELL + LL+ + NYVIQ AL VS
Sbjct: 1348 VEKCLVLGTPEQRNLIVDELLAEGDGLKDLLLDSYANYVIQRALTVS 1394
Score = 49.7 bits (117), Expect = 0.003, Method: Composition-based stats.
Identities = 56/249 (22%), Positives = 95/249 (38%), Gaps = 49/249 (19%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L LR ++V LAKD +Q+ +SS P + +F +V E+ + G V+Q+
Sbjct: 1220 LAALRPSVVLLAKDVNANHVVQKILSSFPASRCDFVFAQVKKNCVEISTERHGCCVMQRC 1279
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
++ ++ IL Q+I+ A
Sbjct: 1280 IDAAPPRAKSEIL---------------------------------QEIA-------ANA 1299
Query: 268 VTLTKDTNGHYVIQYCVKHFSHED-TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ L +D G+YV+Q CV E + + + ++ K V++ C+
Sbjct: 1300 LELMQDAFGNYVVQ-CVLDLQIEGFNGAVAGAIRGHIRELSMQKFSSNVVEKCLVLGTPE 1358
Query: 327 QRERLVAEIIANA-----LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
QR +V E++A LLL D Y NYV+Q L + P LL ++
Sbjct: 1359 QRNLIVDELLAEGDGLKDLLL--DSYANYVIQRALTVSSPAAQQQLLLAIQPCLSQLRQT 1416
Query: 382 KYGSNVVER 390
+ GS V +
Sbjct: 1417 QPGSRVAHK 1425
Score = 39.7 bits (91), Expect = 3.4, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 17/156 (10%)
Query: 297 NEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLL 356
N+ N IA D+ GC +LQ + + + E + E++ ++L D +GNY+VQ ++
Sbjct: 1108 NKYKGNIEMIARDQIGCRMLQRKLSEASPEEVEAIRLEVLECVVVLLVDPFGNYLVQKVV 1167
Query: 357 -ALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCL-----LESGEEQSTRIIIELLRS 410
PQ+ L+R++ V + +G+ V++ + L +G + ++ L
Sbjct: 1168 EECEEPQLL-QLVRKIRPRLVDICLSPHGTRAVQKLIEVCAGLPAGSAATNELLAAL--R 1224
Query: 411 PNVSMLLMHPFGNYVIQSALLVSKVRLFSSPPISVC 446
P+V +L N+V+Q ++ SS P S C
Sbjct: 1225 PSVVLLAKDVNANHVVQ--------KILSSFPASRC 1252
>gi|119182519|ref|XP_001242388.1| hypothetical protein CIMG_06284 [Coccidioides immitis RS]
Length = 1208
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 110/284 (38%), Positives = 162/284 (57%), Gaps = 29/284 (10%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L RG + L KDQ+GCR+LQR + E ++MIF+E V ELM DPFGNY+ QKL
Sbjct: 808 LEQYRGELYGLCKDQHGCRYLQRKLEERIPENVQMIFLETHVHVVELMTDPFGNYLCQKL 867
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E ++EQRT ++ N QLV I LN HG RA+ K++E ++ P+Q V+ ALR
Sbjct: 868 LEFSNDEQRT---ALINNAAPQLVSIALNQHGTRALQKMIEFISTPEQTQTVIKALRDKV 924
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L +D NG++VIQ C+ S D Q C++++ G Q
Sbjct: 925 VDLVQDLNGNHVIQKCLNRLSAADA------------------------QRCIDHASGDQ 960
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R +L+A+I A++ L +D +GNYVVQ++L L P+ T L + G S K+ SNV
Sbjct: 961 RAQLIAQITASSYTLVQDPFGNYVVQYILDLAEPRFTEPLCQTFIGKVSMLSKQKFSSNV 1020
Query: 388 VERCLLESGEEQSTRIII-ELLRSPNVSMLLMHPFGNYVIQSAL 430
+E+C L + + QS R++I E+L + +L F NYV+Q+A+
Sbjct: 1021 IEKC-LRTADFQSRRLLIQEMLPVNELERMLRDSFANYVVQTAM 1063
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 96/214 (44%), Gaps = 29/214 (13%)
Query: 229 QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFS 288
+L +C + HG R + + LE P+ + ++ V L D G+Y+ Q ++ +
Sbjct: 814 ELYGLCKDQHGCRYLQRKLEERI-PENVQMIFLETHVHVVELMTDPFGNYLCQKLLEFSN 872
Query: 289 HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALL-LAEDCY 347
E L+N A IA ++ G LQ +E+ ++ + V + + + ++ L +D
Sbjct: 873 DEQRTALINNAAPQLVSIALNQHGTRALQKMIEFISTPEQTQTVIKALRDKVVDLVQDLN 932
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GN+V+Q L N+ + +RC+ + +Q ++I ++
Sbjct: 933 GNHVIQKCL------------------------NRLSAADAQRCIDHASGDQRAQLIAQI 968
Query: 408 LRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSSP 441
S L+ PFGNYV+Q L +++ R F+ P
Sbjct: 969 TAS--SYTLVQDPFGNYVVQYILDLAEPR-FTEP 999
>gi|124506293|ref|XP_001351744.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23504673|emb|CAD51551.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|24849849|gb|AAM28242.1| RNA-binding protein Puf1 [Plasmodium falciparum]
Length = 1894
Score = 200 bits (509), Expect = 1e-48, Method: Composition-based stats.
Identities = 108/283 (38%), Positives = 169/283 (59%), Gaps = 5/283 (1%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
GNI +AKDQ GCR LQR + + IE I+ E +D + ELM+DPFGNY+ QKL+E+C+
Sbjct: 826 GNICKIAKDQTGCRILQRILEKKNPKHIEEIYNEALDHIIELMVDPFGNYLCQKLMEVCT 885
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
EQ +I+ ++ QL+ ++ HG R V KL+E + P QI AL+ +TL K
Sbjct: 886 SEQIEKIIDKSSD---QLINASISVHGTRTVQKLIEMIKTPSQIKKTTKALKNSIITLIK 942
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D NG++V+Q C+ + ++ + +NC ++T + GCCV+Q C++ + AQ+E +
Sbjct: 943 DINGNHVVQKCLITLTSHQCDFIYEAILNNCVEVSTHRHGCCVIQRCIDSANEAQKELFI 1002
Query: 333 AEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCL 392
I NAL L +D +GNYVVQ++L L ++ + +L + + K+ SNVVE+CL
Sbjct: 1003 RNISNNALDLVQDAFGNYVVQYILNLGNEKVNLEIANKLLPNIEELAVQKFSSNVVEKCL 1062
Query: 393 LESGEEQSTRIIIELLRSPN--VSMLLMHPFGNYVIQSALLVS 433
+ + II E+L+ + +++ PFGNYVIQ AL V+
Sbjct: 1063 IIGNNKCRKLIINEILKKDKDILKQIILDPFGNYVIQRALSVA 1105
Score = 39.3 bits (90), Expect = 4.6, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 20/90 (22%)
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLE 248
D + ++++DPFGNYV+Q+ + + SE + T+++ GI+ +K L
Sbjct: 1083 DILKQIILDPFGNYVIQRALSVASEPELTKLV-----------------EGIKPYIKELR 1125
Query: 249 NLTNPQQISLVLAALRPGAVTLTKDTNGHY 278
N+++ ++I+ LA P L D N Y
Sbjct: 1126 NISSGKRIAWKLAKKHP---LLNADINNQY 1152
>gi|156084740|ref|XP_001609853.1| pumilio-family RNA binding repeat containing protein [Babesia
bovis]
gi|154797105|gb|EDO06285.1| pumilio-family RNA binding repeat containing protein [Babesia
bovis]
Length = 656
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/301 (35%), Positives = 176/301 (58%), Gaps = 10/301 (3%)
Query: 141 DSFDCSSL-----RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELM 195
DS + S+L + GNI +AKDQ GCR LQ+ + + +E I V+D + +LM
Sbjct: 217 DSLNVSTLINNTDEHIAGNIAIIAKDQTGCRLLQKMLETEDYLVVETILEGVMDNLVDLM 276
Query: 196 IDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ 255
+DPFGNY+ QKL+ +CS +Q I+ + L+ I LN HG R + +L+E L P+Q
Sbjct: 277 MDPFGNYLCQKLITVCSTQQIDAIIDVAGP---MLIDISLNMHGTRTLQRLIEVLHEPKQ 333
Query: 256 ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCV 315
I+ V L P TL D NG++VIQ C+ ED +++ + AT + GCCV
Sbjct: 334 IAKVTKLLSPSVETLVTDINGNHVIQKCLSVLPPEDCEFIHQAILKKSLMFATHRHGCCV 393
Query: 316 LQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHY 375
+Q C++ + QR+ LV +I + L L +D +GNYVVQ++L L+ + A +++ +
Sbjct: 394 IQRCIDAANTRQRDELVETLIEHTLELIQDPFGNYVVQYILKLKNMDVNARIVKAVAPKA 453
Query: 376 VSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSM--LLMHPFGNYVIQSALLVS 433
++ +K+ SNV+E+CL+ + ++ + +++P ++ L++HPFGNYVIQ L V+
Sbjct: 454 TLYAKHKFSSNVIEKCLILTHTRIRNILVEKFVKAPYDTLKDLMLHPFGNYVIQRVLSVA 513
Query: 434 K 434
+
Sbjct: 514 Q 514
>gi|15239174|ref|NP_199123.1| pumilio 13 [Arabidopsis thaliana]
gi|75171666|sp|Q9FMH4.1|PUM13_ARATH RecName: Full=Putative pumilio homolog 13; Short=APUM-13;
Short=AtPUM13
gi|9757836|dbj|BAB08273.1| unnamed protein product [Arabidopsis thaliana]
gi|332007526|gb|AED94909.1| pumilio 13 [Arabidopsis thaliana]
Length = 527
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/315 (38%), Positives = 185/315 (58%), Gaps = 12/315 (3%)
Query: 125 NQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIF 184
N W S+ NQ SS+ + RG+ ++A D+ + L++T+ KE I+MIF
Sbjct: 187 NSWRSNEGCTYNQ----DQAASSMENGRGSYFSIATDRVWSKELEKTIFVGTKETIDMIF 242
Query: 185 VEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVL 244
+I +CELM+DPFGN VV+ L+ CS EQ I+ ++T + V IC N G A+
Sbjct: 243 DGLIVGICELMVDPFGNDVVKLLIGKCSSEQIILIVDVVTRHISKFVNICFNPIGTLAIQ 302
Query: 245 KLLENLTN--PQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADN 302
LL ++ QI ++ A+ A+ LT++TN YVI C + F+ + LL V+ +
Sbjct: 303 VLLTSIHERANNQIPRIMDAISSVALQLTRNTNAKYVILACFRMFTSSQCRRLLEVVSQH 362
Query: 303 CYGIATDKSGCCVLQHCVEYSKGAQ---RERLVAEIIANALLLAEDCYGNYVVQHLLALR 359
CY IA D++GCC+LQ C + + R+RL++E+I +AL L +C+GNYVVQ+++ L
Sbjct: 363 CYQIAIDQNGCCLLQQCFDKERVPNHEIRQRLISEVIEHALKLCLNCHGNYVVQYVVELD 422
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMH 419
T L+ +L +Y + NKYGS+VV++ L G + S I+++LLR + LL+
Sbjct: 423 NQHETDLLVNKLLRNYAHLARNKYGSHVVQKLLKLRGID-SKLIVVDLLRG--IDTLLLD 479
Query: 420 PFGNYVIQSALLVSK 434
PFGNYVIQ+A VSK
Sbjct: 480 PFGNYVIQTAWFVSK 494
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSE 213
N LA+++YG H+ + + L + ++I V+++ + L++DPFGNYV+Q + E
Sbjct: 437 NYAHLARNKYGS-HVVQKLLKLRGIDSKLIVVDLLRGIDTLLLDPFGNYVIQTAWFVSKE 495
Query: 214 EQR 216
+ R
Sbjct: 496 DVR 498
>gi|190347187|gb|EDK39419.2| hypothetical protein PGUG_03517 [Meyerozyma guilliermondii ATCC
6260]
Length = 721
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 180/303 (59%), Gaps = 19/303 (6%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEE-----------IEMIFVEVIDRVCEL 194
+ L D G I L KDQ+GCR LQR + S KE MIF E+ ++ +L
Sbjct: 391 AKLSDFSGEIYNLCKDQHGCRFLQRQLDSGGKENNGHGKEQSSVVATMIFNEIYLKIVDL 450
Query: 195 MIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQ 254
M+DPFGNY++QKL E S +QR ++++ N + +RI L++HG RA+ KL+E ++ +
Sbjct: 451 MVDPFGNYLIQKLFEHVSTDQR---VILVKNAAPEFMRIALDSHGTRALQKLVECISTEE 507
Query: 255 QISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCC 314
+ L++ +L P V L++D NG++V+Q C++ S + +++ + A +C IAT + GCC
Sbjct: 508 ESQLLIKSLSPHVVALSRDLNGNHVVQKCLQRLSAANNQFIFDTAAFHCNEIATHRHGCC 567
Query: 315 VLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGH 374
VLQ C+++ AQR +L ++ NA L+ D +GNYVVQ++L + +L + +
Sbjct: 568 VLQRCLDHGTMAQRAQLSLKVAQNATNLSFDPFGNYVVQYVLTRGDAKSIEIVLSHIRNN 627
Query: 375 YVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL--RSPNVSMLLMHPFGNYVIQSALLV 432
V+ S +K+GSNV+E+ L S T +IE+L + +L +GNYV+Q++L V
Sbjct: 628 IVTLSLHKFGSNVIEKSLRIS---TLTDTLIEVLLANQARFADMLNDAYGNYVLQTSLDV 684
Query: 433 SKV 435
+ V
Sbjct: 685 ASV 687
>gi|50284731|ref|XP_444793.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524095|emb|CAG57684.1| unnamed protein product [Candida glabrata]
Length = 786
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 107/295 (36%), Positives = 176/295 (59%), Gaps = 11/295 (3%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
++L GNI +L KDQ+GCR LQ+ + L K+ + IF E + ELM D FGNY++Q
Sbjct: 459 ATLDQFIGNIYSLCKDQHGCRFLQKQLDVLGKKASDAIFEETKEYTVELMTDSFGNYLIQ 518
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E +++QR + + ++V I + HG RA+ KL+E ++ ++ +V+ +L+P
Sbjct: 519 KLLERVTDDQRVELAKIAAP---KMVEISKDPHGTRALQKLIECISTKEEAEIVVKSLQP 575
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
V L+KD NG++VIQ C++ + ED++++ + + C IAT + GCCVLQ C+++
Sbjct: 576 DTVILSKDLNGNHVIQKCLQKLNPEDSQFIFDAAGNECGEIATHRHGCCVLQRCLDHGTK 635
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ----ITASLLRQLEGHYVSFSCN 381
Q + L +++ +L D +GNYVVQ++++ + T ++ QL+ + S +
Sbjct: 636 TQFKDLCEKLLKYIDMLTFDPFGNYVVQYIISKETERNDYDYTYKIVNQLKPRFTELSVH 695
Query: 382 KYGSNVVERCLLESGEEQSTRIIIELLR--SPNVSMLLMHPFGNYVIQSALLVSK 434
K+GSNVVE+ L S II EL+ S V LL FGNYV+Q+AL +S+
Sbjct: 696 KFGSNVVEKVLRTP--VVSETIINELINEGSAEVQALLNDSFGNYVLQTALDISR 748
>gi|410080980|ref|XP_003958070.1| hypothetical protein KAFR_0F03390 [Kazachstania africana CBS 2517]
gi|372464657|emb|CCF58935.1| hypothetical protein KAFR_0F03390 [Kazachstania africana CBS 2517]
Length = 807
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/369 (33%), Positives = 194/369 (52%), Gaps = 28/369 (7%)
Query: 81 NGFFSHPCQEAEPINQDSSILNLLHNHNFDGLRSNGNELSS----VPRNQ-----WMSSL 131
NG P PIN H N G S GN + RN + ++
Sbjct: 411 NGMIPSPQHPHPPINSP-------HRKNQRGQGSRGNHFGTRGNKFGRNGGNHSYFYNNT 463
Query: 132 SLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRV 191
+RN + ++L GNI +L KDQ+GCR LQ+ + L K + IF E D
Sbjct: 464 VRERNMEGNSRYIDATLDQFIGNIYSLCKDQHGCRFLQKQLDVLGKYAADAIFEETKDHT 523
Query: 192 CELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLT 251
ELM D FGNY++QKL+E + EQR I + + + V I LN+HG RA+ KL+E ++
Sbjct: 524 IELMTDSFGNYLIQKLIERVTTEQRIEIAKIASP---EFVDIALNSHGTRALQKLIECIS 580
Query: 252 NPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKS 311
++ ++++ AL+P V L+ D NG++V+Q C++ +D +++ + +C IAT +
Sbjct: 581 TAEEANIIIEALKPAVVRLSMDLNGNHVVQKCLEKLEPKDFQFIFDLAIGDCIDIATHRH 640
Query: 312 GCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP----QITASL 367
GCCVLQ C+++ Q L +++ N L D +GNYVVQ++L + T +
Sbjct: 641 GCCVLQRCLDHGTKEQTTSLCDQLLTNLDKLTLDPFGNYVVQYILTKEAEKQDYEYTYKI 700
Query: 368 LRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLR---SPNVSMLLMHPFGNY 424
+ L+ S +K+GSNV+E+ L + +S II EL++ ++ LL +GNY
Sbjct: 701 VNLLKPKLAELSLHKFGSNVIEKLLKTNVVSES--IIAELVKEDGKSDIESLLNDSYGNY 758
Query: 425 VIQSALLVS 433
V+Q+AL +S
Sbjct: 759 VLQTALDIS 767
>gi|146416333|ref|XP_001484136.1| hypothetical protein PGUG_03517 [Meyerozyma guilliermondii ATCC
6260]
Length = 721
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 179/303 (59%), Gaps = 19/303 (6%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEE-----------IEMIFVEVIDRVCEL 194
+ L D G I L KDQ+GCR LQR + KE MIF E+ ++ +L
Sbjct: 391 AKLSDFSGEIYNLCKDQHGCRFLQRQLDLGGKENNGHGKEQSSVVATMIFNEIYLKIVDL 450
Query: 195 MIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQ 254
M+DPFGNY++QKL E S +QR ++++ N + +RI L++HG RA+ KL+E ++ +
Sbjct: 451 MVDPFGNYLIQKLFEHVSTDQR---VILVKNAAPEFMRIALDSHGTRALQKLVECISTEE 507
Query: 255 QISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCC 314
+ L++ +L P V L++D NG++V+Q C++ S + +++ + A +C IAT + GCC
Sbjct: 508 ESQLLIKSLSPHVVALSRDLNGNHVVQKCLQRLSAANNQFIFDTAAFHCNEIATHRHGCC 567
Query: 315 VLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGH 374
VLQ C+++ AQR +L ++ NA L+ D +GNYVVQ++L + +L + +
Sbjct: 568 VLQRCLDHGTMAQRAQLSLKVAQNATNLSFDPFGNYVVQYVLTRGDAKSIEIVLSHIRNN 627
Query: 375 YVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL--RSPNVSMLLMHPFGNYVIQSALLV 432
V+ S +K+GSNV+E+ L S T +IE+L + +L +GNYV+Q++L V
Sbjct: 628 IVTLSLHKFGSNVIEKSLRIS---TLTDTLIEVLLANQARFADMLNDAYGNYVLQTSLDV 684
Query: 433 SKV 435
+ V
Sbjct: 685 ASV 687
>gi|448114573|ref|XP_004202611.1| Piso0_001455 [Millerozyma farinosa CBS 7064]
gi|359383479|emb|CCE79395.1| Piso0_001455 [Millerozyma farinosa CBS 7064]
Length = 824
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 179/306 (58%), Gaps = 22/306 (7%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTM------SSLPKEEIE------------MIFVEV 187
+ L D G I++L KDQ+GCR LQR + S P E+ MIF E+
Sbjct: 488 AKLEDFTGEILSLCKDQHGCRFLQRQLDMGREVSEKPTGELSKANILPNDVAASMIFNEI 547
Query: 188 IDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
++ ELM DPFGNY++QKL E S +QR ++++ N + ++I L+THG RA+ KL+
Sbjct: 548 YLKIVELMTDPFGNYLIQKLFENVSTDQR---IILVKNSSPEFIKIALDTHGTRALQKLV 604
Query: 248 ENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIA 307
E +T ++ +++ +L P V+L++D NG++V+Q C++ + +++ + + C IA
Sbjct: 605 ECITTEEEGRIIIESLSPHIVSLSRDLNGNHVVQKCLQKLKPSENQFIFDTASMYCNEIA 664
Query: 308 TDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASL 367
T + GCCVLQ C+++ QR++L E+ NA L+ D +GNYVVQ++L+ + +
Sbjct: 665 THRHGCCVLQRCLDHGNAEQRKQLSLEVAENATNLSLDPFGNYVVQYVLSRGDEHSISLI 724
Query: 368 LRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQ 427
+ ++ + ++ S +K+GSNV+E+ L G+ I + L LL FGNYV+Q
Sbjct: 725 MDHIKNNIITLSLHKFGSNVIEKS-LRIGKLTDELIKVLLENQNRFPELLNDAFGNYVLQ 783
Query: 428 SALLVS 433
++L V+
Sbjct: 784 TSLDVA 789
>gi|82539941|ref|XP_724322.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478929|gb|EAA15887.1| 00806 domains.-related [Plasmodium yoelii yoelii]
Length = 923
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/310 (35%), Positives = 183/310 (59%), Gaps = 18/310 (5%)
Query: 131 LSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
LS K N D D L + GN+ +AKDQ CR LQ+ + + I+ I+ E ++
Sbjct: 617 LSKKSNISNDDYLD---LTTISGNVYKIAKDQSKCRTLQKILDKKNQSCIDEIYNEALEH 673
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+ ELM+DPFGNY+ QKL+E+C+ EQ +I+ ++ +L+ ++ HG R V KL+E +
Sbjct: 674 IIELMMDPFGNYLCQKLIEVCTPEQIEKIIDKSSD---ELINASISVHGTRTVQKLIEMI 730
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
P QI + +L+ + L KD NG++V+Q C+ S ++ +E+ N ++T +
Sbjct: 731 KTPSQIRKITNSLKNSIIILIKDINGNHVVQKCLVTLSSTQCNFIYDEILKNFVEVSTHR 790
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLAL---RVP-QITAS 366
GCCV+Q C++ + AQ+E L+ +I +N L L +D +GNYVVQ++L + +V +I
Sbjct: 791 HGCCVIQRCIDSANEAQKELLINKISSNCLELVQDAFGNYVVQYILNMGNEKVNFEIIEK 850
Query: 367 LLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIE--LLRSPNV-SMLLMHPFGN 423
LL+ +E H V K+ SNV+E+CL+ G + +++I L + N+ +++ +GN
Sbjct: 851 LLKDIEKHAVQ----KFSSNVIEKCLI-IGTTKCRKMMINGLLKKGKNILKNVILDKYGN 905
Query: 424 YVIQSALLVS 433
YVIQ AL V+
Sbjct: 906 YVIQRALSVA 915
>gi|68073265|ref|XP_678547.1| RNA-binding protein [Plasmodium berghei strain ANKA]
gi|56499050|emb|CAH95801.1| RNA-binding protein, putative [Plasmodium berghei]
Length = 851
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/310 (35%), Positives = 182/310 (58%), Gaps = 18/310 (5%)
Query: 131 LSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
+S K N D D L + GN+ +AKDQ CR LQ+ + + I+ I+ E ++
Sbjct: 442 ISKKSNISNDDYLD---LTAISGNVYKIAKDQSKCRTLQKILDKKNQSCIDEIYNEALEH 498
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+ ELM+DPFGNY+ QKL+E+C+ EQ +I+ ++ +L+ ++ HG R V KL+E +
Sbjct: 499 IIELMMDPFGNYLCQKLIEVCTPEQIEKIIDKSSD---ELINASISVHGTRTVQKLIEMI 555
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
P QI + +L+ + L KD NG++V+Q C+ S ++ +E+ N ++T +
Sbjct: 556 KTPSQIRKITNSLKNSIIILIKDINGNHVVQKCLGTLSSIQCNFIYDEILKNFVEVSTHR 615
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP----QITAS 366
GCCV+Q C++ + AQ+E L+ +I +N+L L +D +GNYVVQ++L + +I
Sbjct: 616 HGCCVIQRCIDSANEAQKELLINKISSNSLELVQDAFGNYVVQYILNMGNEKVNFEIIEK 675
Query: 367 LLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIE--LLRSPNV-SMLLMHPFGN 423
LL+ +E H V K+ SNV+E+CL+ G + +I+I L + NV +++ +GN
Sbjct: 676 LLKDIEKHAVQ----KFSSNVIEKCLI-IGTTKCRKIMINGLLKKGKNVLKNVILDKYGN 730
Query: 424 YVIQSALLVS 433
YVIQ AL V+
Sbjct: 731 YVIQRALSVA 740
>gi|428168220|gb|EKX37168.1| hypothetical protein GUITHDRAFT_89808 [Guillardia theta CCMP2712]
Length = 505
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/301 (35%), Positives = 173/301 (57%), Gaps = 21/301 (6%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
S++ + G I +L++DQ GCR LQ+ + + +++IF EVI+R+ +LM DPFGNY+ QK
Sbjct: 34 SVQQVVGQIFSLSRDQLGCRFLQKQLEENTQMSLDIIFSEVIERIVDLMTDPFGNYLCQK 93
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQ-----QISLVLA 261
L++ C+ EQR I+ + LV I LN HG RA KL+E L + +I V+
Sbjct: 94 LLDYCNPEQRAAIVSRVAP---HLVPISLNIHGTRAAQKLIERLGSDHYPTEAEIQAVVN 150
Query: 262 ALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVE 321
L+ G + L +D NG++V+Q C++ + +++ + VA +C +A+ + GCCV Q CV+
Sbjct: 151 HLKGGVIQLIQDLNGNHVVQRCLQKLDAKHNQFIYDAVAQHCILVASHRHGCCVFQRCVD 210
Query: 322 YSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGH------- 374
++ Q+ ++V +++ + L +D YGNYVVQ++L Q+T LL H
Sbjct: 211 FATPEQKHQVVMQVVEKTVQLVQDQYGNYVVQYVLE----QVTFLLLVCASSHSPPTYQV 266
Query: 375 --YVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLV 432
Y K+ SNVVE+CL + E ++ +L + + LL P+ NYVIQ AL V
Sbjct: 267 PAYRPNIVQKFSSNVVEKCLQLASPEGQALMVTQLAQKEQILSLLQDPYANYVIQRALQV 326
Query: 433 S 433
+
Sbjct: 327 A 327
>gi|150863841|ref|XP_001382453.2| hypothetical protein PICST_66941 [Scheffersomyces stipitis CBS
6054]
gi|149385097|gb|ABN64424.2| RNA binding protein [Scheffersomyces stipitis CBS 6054]
Length = 794
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/310 (35%), Positives = 182/310 (58%), Gaps = 19/310 (6%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQR-------------TMSSLPKEEIE--MIFVEVIDR 190
+ L D G I +L KDQ+GCR LQR T SS+ +I MIF E+ +
Sbjct: 460 AKLSDFTGEIFSLCKDQHGCRFLQRQLDLGREVAEGRNTDSSVLSNDIAATMIFNEIYLK 519
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+ ELM DPFGNY++QKL E S +QR ++++ N + +RI L+ HG RA+ KL+E +
Sbjct: 520 IVELMTDPFGNYLIQKLFENVSVDQR---IILVKNAAPEFIRIALDPHGTRALQKLVECI 576
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
+ ++ L++ +L P V+L++D NG++V+Q C++ E+ +++ + +C IAT +
Sbjct: 577 STEEESKLIIGSLSPHIVSLSRDLNGNHVVQKCLQKLKPEENQFIFETASLHCNEIATHR 636
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GCCVLQ C+++ QR +L ++ NA L+ D +GNYVVQ++L+ ++
Sbjct: 637 HGCCVLQRCLDHGNSDQRRQLSLKVAENATNLSLDPFGNYVVQYVLSRGDEGSIQIIMDH 696
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
++ + +S S +K+GSNV+E+ L + +T I + L S +L FGNYV+Q++L
Sbjct: 697 IKSNIISLSLHKFGSNVIEKS-LRINKLTNTLIDVLLKHQDRFSDMLNDAFGNYVLQTSL 755
Query: 431 LVSKVRLFSS 440
V+ + +S
Sbjct: 756 DVANPQDLNS 765
>gi|240276968|gb|EER40478.1| RNA-binding protein [Ajellomyces capsulatus H143]
Length = 847
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 154/288 (53%), Gaps = 41/288 (14%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F + L +G + + KDQYGCR+LQ+ + ++MIF+E V ELM DPFGNY
Sbjct: 445 FGNAPLETYQGELYGMCKDQYGCRYLQKKLEEQSPAHVQMIFLETHIHVVELMTDPFGNY 504
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQRT ++ N QLV+I LN HG RA+ K++E ++ P+Q
Sbjct: 505 LCQKLLEFSNDEQRT---ALINNAAPQLVKIALNQHGTRALQKMIEFISTPEQ------- 554
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
++ + V ++C + T + GCCVLQ C+++
Sbjct: 555 -------------------------------FIYDAVGESCVPVGTHRHGCCVLQRCIDH 583
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ G QR RL+ +I NA L +D +GNYVVQ++L L P + R G+ + S K
Sbjct: 584 ASGDQRARLIEQITNNAFTLVQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQK 643
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+C+ + + + ++ E+L + +L F NYV+Q+A+
Sbjct: 644 FSSNVIEKCIRTADPQSRSALVDEMLVPSELEKMLRDSFANYVVQTAM 691
>gi|401625713|gb|EJS43708.1| puf4p [Saccharomyces arboricola H-6]
Length = 898
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 114/310 (36%), Positives = 181/310 (58%), Gaps = 14/310 (4%)
Query: 133 LKRNQWLQDS--FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
+ + + L+DS F + L GNI +L KDQ+GCR LQ+ + L + + IF E D
Sbjct: 554 VDKQRKLEDSSRFADAVLDQYIGNIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDY 613
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
ELM D FGNY++QKL+E + EQR +L +++ F V I LN HG RA+ KL+E +
Sbjct: 614 TVELMTDSFGNYLIQKLLEEVTTEQRI-VLTKISSPHF--VEISLNPHGTRALQKLIECI 670
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
T ++ +V+ +LRP V L+KD NG++VIQ C++ E+ +++ + + DNC IAT +
Sbjct: 671 TTDEEAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAICDNCIDIATHR 730
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ----ITAS 366
GCCVLQ C+++ Q E L +++ L D +GNYVVQ+++ + T
Sbjct: 731 HGCCVLQRCLDHGSREQCETLCDKLLTLVDKLTLDPFGNYVVQYIITKESAKNKYDYTHK 790
Query: 367 LLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS---PNVSMLLMHPFGN 423
++ L+ + S +K+GSNV+E+ L S +I+E+L + + LL +GN
Sbjct: 791 IVHLLKPKVIELSIHKFGSNVIEKIL--KTPIVSEPMILEILNNGGEAGIQSLLNDSYGN 848
Query: 424 YVIQSALLVS 433
YV+Q+AL +S
Sbjct: 849 YVLQTALDIS 858
>gi|448112001|ref|XP_004201984.1| Piso0_001455 [Millerozyma farinosa CBS 7064]
gi|359464973|emb|CCE88678.1| Piso0_001455 [Millerozyma farinosa CBS 7064]
Length = 825
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 177/306 (57%), Gaps = 22/306 (7%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTM------SSLPKEEIE------------MIFVEV 187
+ L D G I++L KDQ+GCR LQR + S P E+ MIF E+
Sbjct: 489 AKLEDFTGEILSLCKDQHGCRFLQRQLDLGRELSENPTGELSKANILPNDVAASMIFNEI 548
Query: 188 IDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
++ ELM DPFGNY++QKL E S +QR ++++ N + ++I L+THG RA+ KL+
Sbjct: 549 YLKIVELMTDPFGNYLIQKLFENVSTDQR---IILVKNSSPEFIKIALDTHGTRALQKLV 605
Query: 248 ENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIA 307
E +T ++ +++ +L P V+L++D NG++V+Q C++ + +++ + + C IA
Sbjct: 606 ECITTEEEGRIIIESLSPHIVSLSRDLNGNHVVQKCLQKLKPSENQFIFDTASMYCNEIA 665
Query: 308 TDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASL 367
T + GCCVLQ C+++ QR++L + NA L+ D +GNYVVQ++L+ +
Sbjct: 666 THRHGCCVLQRCLDHGNAEQRKQLSLRVAENATNLSLDPFGNYVVQYVLSRGDEHSIGLI 725
Query: 368 LRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQ 427
+ ++ + ++ S +K+GSNV+E+ L G+ I + L LL FGNYV+Q
Sbjct: 726 MDHIKNNIITLSLHKFGSNVIEKS-LRIGKLTDELIKVLLENQNRFPELLNDAFGNYVLQ 784
Query: 428 SALLVS 433
++L V+
Sbjct: 785 TSLDVA 790
>gi|407406573|gb|EKF30846.1| pumilio/PUF RNA binding protein 3, putative [Trypanosoma cruzi
marinkellei]
Length = 565
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 171/285 (60%), Gaps = 7/285 (2%)
Query: 151 LRGNIVALAKDQYGCRHLQRTM--SSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
LRG++ +AKDQ+GCR LQR + S+ E + +I E++ V ELM D + N+++QKL
Sbjct: 196 LRGSVYEIAKDQHGCRFLQRLLGGSNGDGEFVRIIMNEIVPHVAELMTDQYANFLIQKLF 255
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
++ ++ R ++ + +++ I L HG +V K++E + + +++ ++ AL V
Sbjct: 256 DMMPQDVRYKVARVAAP---KIISIALTPHGTFSVQKMVETIASREEMDILREALSKDVV 312
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L KD +G++VIQ ++ FSH D +++ V +C IA +K GCCVLQ C+EY+ +QR
Sbjct: 313 RLVKDAHGNHVIQKVLQRFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRCLEYASSSQR 372
Query: 329 ERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
LV +I+ L +AED +GNYV+Q++L + T ++ H V NK+ SNV+
Sbjct: 373 ATLVNQILRCCLQIAEDPFGNYVLQYVLESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVI 432
Query: 389 ERCLLESGEEQSTRIIIELLRSPN-VSMLLMHPFGNYVIQSALLV 432
E+ +L + + +E + SP+ VS L+ FGNYV+Q+AL +
Sbjct: 433 EK-VLRGASQPVQEMYVETMCSPDVVSRLIQDDFGNYVLQTALTI 476
>gi|407837279|gb|EKF99706.1| pumilio/PUF RNA binding protein 3, putative [Trypanosoma cruzi]
Length = 561
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 171/285 (60%), Gaps = 7/285 (2%)
Query: 151 LRGNIVALAKDQYGCRHLQRTM--SSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
LRG++ +AKDQ+GCR LQR + S+ E + +I EV+ V ELM D + N+++QKL
Sbjct: 196 LRGSVYEIAKDQHGCRFLQRLLGGSNGDGEFVRIIMNEVVPHVAELMTDQYANFLIQKLF 255
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
++ ++ R ++ + +++ I L HG +V K++E + + +++ ++ AL V
Sbjct: 256 DMMPQDVRYKVACVAAQ---KIISIALTPHGTFSVQKMVETIASREEMDILREALSKDVV 312
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L KD +G++VIQ ++ FSH D +++ V +C IA +K GCCVLQ C+EY+ +QR
Sbjct: 313 RLVKDAHGNHVIQKVLQRFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRCLEYASCSQR 372
Query: 329 ERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
LV +I+ L +AED +GNYV+Q++L + T ++ H V NK+ SNV+
Sbjct: 373 ATLVNQILRCCLQIAEDPFGNYVLQYVLESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVI 432
Query: 389 ERCLLESGEEQSTRIIIELLRSPN-VSMLLMHPFGNYVIQSALLV 432
E+ +L + + +E + SP+ VS L+ FGNYV+Q+AL +
Sbjct: 433 EK-VLRGASQPVQEMYVETMCSPDVVSRLIQDDFGNYVLQTALTI 476
>gi|320581830|gb|EFW96049.1| Member of the PUF protein family [Ogataea parapolymorpha DL-1]
Length = 548
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/284 (36%), Positives = 169/284 (59%), Gaps = 3/284 (1%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
++ D +I+AL+KDQ+GCR LQ+ + + +IF EV ELM+DPFGNY++QK
Sbjct: 198 TVLDDSTDILALSKDQFGCRFLQKKIDEDFGKNYPLIFKEVHQHSIELMMDPFGNYLIQK 257
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
++ S E+ + L+LTN + IC N HG RA KL++ L+ L+ L P
Sbjct: 258 IILNASAEE---LKLILTNIAPLIHTICRNQHGTRACQKLIDCLSTTGHYRLLQNCLTPH 314
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
V L +D NG++V+Q C+ F ++D +++++ + +N I+T K GCCVLQ +
Sbjct: 315 VVNLIQDLNGNHVVQKCIAKFQNDDLQFIIDSICNNIVKISTHKHGCCVLQKLLNRCNHQ 374
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q +L +EI+AN+ L +D +GNYVVQ L++L +P + + L++ + S K+ SN
Sbjct: 375 QVLQLGSEIVANSYQLMQDQFGNYVVQFLISLDIPSLNSELVKIMVPFINDLSTQKFSSN 434
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
VVE+CL ++ ++ LL+ + +L+ FGNYV+Q+A+
Sbjct: 435 VVEKCLKIKFDQGFNPLVDALLQPQVLGVLVKDQFGNYVVQTAM 478
>gi|255715081|ref|XP_002553822.1| KLTH0E07876p [Lachancea thermotolerans]
gi|238935204|emb|CAR23385.1| KLTH0E07876p [Lachancea thermotolerans CBS 6340]
Length = 710
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 111/296 (37%), Positives = 178/296 (60%), Gaps = 12/296 (4%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+ L D GNI++L KDQ+GCR LQR + I++E D V ELM D FGNY++Q
Sbjct: 382 AKLDDYIGNILSLCKDQHGCRFLQRQLDIGGCNAANSIYLETRDYVVELMTDSFGNYLIQ 441
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E +++QR L ++ + V I L+ HG RA+ KL+E ++ ++ +V+ +LR
Sbjct: 442 KLLERVTDDQR---LELVRSSAQSFVYIALDPHGTRALQKLVECISTEEEAGIVVDSLRG 498
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
V L++D NG++V+Q C++ ED +++ + ++C IAT + GCCVLQ C+++
Sbjct: 499 SIVELSRDLNGNHVVQKCLQKLKPEDFQFIFDAAIESCVKIATHRHGCCVLQRCLDHGSK 558
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALR----VPQITASLLRQLEGHYVSFSCN 381
Q ++L EIIA+ LA D +GNYVVQ++L + + T ++ L+ + S +
Sbjct: 559 EQFQQLCEEIIAHVDELATDPFGNYVVQYILTKQTERSASEYTNRIVNILKPKIIELSLH 618
Query: 382 KYGSNVVERCLLESGEEQSTRIIIELL-RSPN--VSMLLMHPFGNYVIQSALLVSK 434
K+GSNVVE+ L S +I ELL RS + + LL +GNYV+Q+AL +++
Sbjct: 619 KFGSNVVEKVLRTP--VVSELMITELLNRSGDSKIDQLLHDGYGNYVLQTALDIAR 672
>gi|35186940|gb|AAQ84132.1| pumilio protein 3 [Trypanosoma cruzi]
Length = 561
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 171/285 (60%), Gaps = 7/285 (2%)
Query: 151 LRGNIVALAKDQYGCRHLQRTM--SSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
LRG++ +AKDQ+GCR LQR + S+ E + +I EV+ V ELM D + N+++QKL
Sbjct: 196 LRGSVYEIAKDQHGCRFLQRLLGGSNGDGEFVRIIMNEVVPHVAELMTDQYANFLIQKLF 255
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
++ ++ R ++ + +++ I L HG +V K++E + + +++ ++ AL V
Sbjct: 256 DMMPQDVRYKVARVAAP---KIISIALTPHGTFSVQKMVETIASREEMDILREALSKDVV 312
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L KD +G++VIQ ++ FSH D +++ V +C IA +K GCCVLQ C+EY+ +QR
Sbjct: 313 RLVKDAHGNHVIQKVLQRFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRCLEYASCSQR 372
Query: 329 ERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
LV +I+ L +AED +GNYV+Q++L + T ++ H V NK+ SNV+
Sbjct: 373 ATLVNQILRCCLQIAEDPFGNYVLQYVLESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVI 432
Query: 389 ERCLLESGEEQSTRIIIELLRSPN-VSMLLMHPFGNYVIQSALLV 432
E+ +L + + +E + SP+ VS L+ FGNYV+Q+AL +
Sbjct: 433 EK-VLRGASQPVQEMYVETMCSPDVVSRLIQDDFGNYVLQTALTI 476
>gi|366987657|ref|XP_003673595.1| hypothetical protein NCAS_0A06550 [Naumovozyma castellii CBS 4309]
gi|342299458|emb|CCC67213.1| hypothetical protein NCAS_0A06550 [Naumovozyma castellii CBS 4309]
Length = 828
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 171/293 (58%), Gaps = 10/293 (3%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
S+L + GNI +L KDQ+GCR LQ+ + L + ++IF E ELM D FGNY++Q
Sbjct: 501 STLDEFVGNIYSLCKDQHGCRFLQKQLDVLGSKAADLIFEETKFHTIELMTDSFGNYLMQ 560
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E + EQR + + + Q V I LN HG RA+ KL+E + ++ +++ +LR
Sbjct: 561 KLIERVTTEQRIELAKIASP---QFVEIALNPHGTRALQKLIECINTEEEAKIIVESLRD 617
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
V L+KD NG++V+Q C++ D +++ + DNC IAT + GCCVLQ C+++
Sbjct: 618 SIVQLSKDLNGNHVVQKCLQKLHPTDFQFIFDATCDNCVDIATHRHGCCVLQRCLDHGTK 677
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ----ITASLLRQLEGHYVSFSCN 381
Q E+L +++++ L D +GNYVVQ+++ + T ++ L+ S +
Sbjct: 678 EQCEKLCDKLLSHVDKLTLDPFGNYVVQYVITKETERDEFDYTHKIVHLLKPKVAELSVH 737
Query: 382 KYGSNVVERCLLESGEEQSTRIIIELL-RSPNVSMLLMHPFGNYVIQSALLVS 433
K+GSNV+E+ L ++ +I+ELL + LL +GNYV+Q+AL +S
Sbjct: 738 KFGSNVIEKILRTPVVTET--MILELLNHESEIQNLLNDSYGNYVLQTALDIS 788
>gi|154337334|ref|XP_001564900.1| putative pumillio protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061938|emb|CAM38979.1| putative pumillio protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 573
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 169/291 (58%), Gaps = 4/291 (1%)
Query: 144 DCSSLRDLRGNIVALAKDQYGCRHLQRTM-SSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
D + LRG + AKDQ+GCR+LQR + ++ E +++I EVI V ELM D + N+
Sbjct: 192 DAVTADSLRGRVYETAKDQHGCRYLQRWLDTNCDPEVVQVIMDEVIPHVGELMTDQYANF 251
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
++QKL ++ ++ R ++ ++ Q+ I L HG +V K++E ++ ++ ++ A
Sbjct: 252 LIQKLFDIMPDDVRYKVAIVAAP---QICMIALTPHGTFSVQKMIETISTRAEMEIICEA 308
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L V L KD +G++VIQ ++ F +D +Y+ VA +C IA +K GCCVLQ C+EY
Sbjct: 309 LAKDVVRLVKDAHGNHVIQKVLQRFDFDDKEYIYRAVATDCVSIAKNKQGCCVLQRCLEY 368
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ Q+ LV +++A L + +D +GNYV+Q++L +I ++ H V S NK
Sbjct: 369 ASPQQKAALVDQVLACCLQIVQDPFGNYVLQYVLEAHDSKINDTIALSFLPHLVQLSMNK 428
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVS 433
+ SNV+E+ L + + + E+ +S L+ FGNYV+Q+AL ++
Sbjct: 429 FSSNVMEKVLRGASKPVQVLYVEEMCNPEIISRLIQDDFGNYVLQTALTIN 479
>gi|167377764|ref|XP_001734530.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165903897|gb|EDR29287.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 476
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 165/294 (56%), Gaps = 5/294 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ D + + DQYGCR+LQR + + + IF +++ + LM DPFGNY+ QKL
Sbjct: 148 ISDFGSDFSKMCHDQYGCRYLQRQLEDNNPQTTKYIFEQMLPIITPLMSDPFGNYLCQKL 207
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E+ + EQR +I+ +T F + + N HG R++ KL+ + ++ ++++ + P
Sbjct: 208 IEVVNSEQRIQIIRKITPTFFIISK---NIHGTRSIQKLISCYSTKEEQNMLINVISPYV 264
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVA--DNCYGIATDKSGCCVLQHCVEYSKG 325
+ L D+NG++VIQ C+K F D ++ + + DN +AT K GCCV+Q C++Y
Sbjct: 265 IELIFDSNGNHVIQECLKTFGKSDNGFIFDTIVNDDNLVKVATHKHGCCVVQRCIDYGNR 324
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
Q L+ EI+ N+L+L +D +GNYVVQ++L + + + + + L + S K+ S
Sbjct: 325 QQLITLIDEIVKNSLILVKDAFGNYVVQYILNVDIVGVIIDVTKMLLNDLIDLSMQKFSS 384
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFS 439
NV+E+ + E I + L+ +V+ LL + NYVIQ+ L S V S
Sbjct: 385 NVIEKLIRSDEIEVRQMIFDKFLQIKDVTKLLQDSYANYVIQTCLDQSSVEYHS 438
>gi|365760688|gb|EHN02392.1| Puf4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 891
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 181/310 (58%), Gaps = 14/310 (4%)
Query: 133 LKRNQWLQDS--FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
+++ + ++DS F + L GNI +L KDQ+GCR LQ+ + L + + IF E +
Sbjct: 547 VEKQRKIEDSSRFADAVLDQYIGNIHSLCKDQHGCRFLQKQLDVLGSKAADAIFEETKEY 606
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
ELM D FGNY++QKL+E + EQR +L +++ F V I LN HG RA+ KL+E +
Sbjct: 607 TVELMTDSFGNYLIQKLLEAVTTEQRI-VLTKISSPHF--VEISLNPHGTRALQKLIECI 663
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ +V+ +LRP V L+KD NG++VIQ C++ E+ +++ + + DNC IAT +
Sbjct: 664 KTYEEAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAICDNCIDIATHR 723
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ----ITAS 366
GCCVLQ C+++ Q E L +++ L D +GNYVVQ+++ + T
Sbjct: 724 HGCCVLQRCLDHGTREQCETLCNKLLTLVDKLTLDPFGNYVVQYIITKESERKKYDYTHK 783
Query: 367 LLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS---PNVSMLLMHPFGN 423
++ L+ + S +K+GSNV+E+ L S +I+E+L + + LL +GN
Sbjct: 784 IVHLLKPRAIELSIHKFGSNVIEKIL--KTPIVSEPMILEILNNGGETGIQSLLNDSYGN 841
Query: 424 YVIQSALLVS 433
YV+Q+AL +S
Sbjct: 842 YVLQTALDIS 851
>gi|255733004|ref|XP_002551425.1| predicted protein [Candida tropicalis MYA-3404]
gi|240131166|gb|EER30727.1| predicted protein [Candida tropicalis MYA-3404]
Length = 675
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 181/298 (60%), Gaps = 9/298 (3%)
Query: 141 DSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFG 200
D + + ++D G+I++L KDQ+GCR LQR + + + ++IF E+ ++ ELMIDPFG
Sbjct: 359 DKYVNAKVQDFTGSILSLCKDQHGCRFLQRELYN--ETNTDLIFNEICPKISELMIDPFG 416
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVL 260
NY+VQKL E+ + +QR L+++ N +L+RI L+ HG RA KL++ + ++I++++
Sbjct: 417 NYLVQKLFEMVNSDQR---LILIKNTSSELLRISLDPHGTRAFQKLIDVIETEEEINIII 473
Query: 261 AALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCV 320
+ P VTL D+NG+++IQ + + E + DN + IA + GCCVLQ C+
Sbjct: 474 DKVSPHVVTLIYDSNGNHLIQKIITKLAPE---IFYEIICDNLFSIACHRHGCCVLQKCL 530
Query: 321 EYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSC 380
++ +QR++L EI L+ D +GNYV+Q++L + +LL +++ + ++
Sbjct: 531 DHGSESQRKQLSLEISKYTFELSLDPFGNYVIQYILKKGDKESIDTLLEKIKFNLINLCT 590
Query: 381 NKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLF 438
NK+GSN++E CLL + I + +S ++ PFGNYVIQ++L VS V F
Sbjct: 591 NKFGSNIIE-CLLRIPILSTELINCLIEKSDEFYKMVNDPFGNYVIQTSLDVSNVEQF 647
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 39/176 (22%)
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSE 213
N+ ++A ++GC LQ+ + + + + + +E+ EL +DPFGNYV+Q +++ +
Sbjct: 512 NLFSIACHRHGCCVLQKCLDHGSESQRKQLSLEISKYTFELSLDPFGNYVIQYILKKGDK 571
Query: 214 EQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKD 273
E I +L F L+ +C N G + LL
Sbjct: 572 ES---IDTLLEKIKFNLINLCTNKFGSNIIECLLR------------------------- 603
Query: 274 TNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
+ S E L+ E +D Y + D G V+Q ++ S Q E
Sbjct: 604 ----------IPILSTELINCLI-EKSDEFYKMVNDPFGNYVIQTSLDVSNVEQFE 648
>gi|349578206|dbj|GAA23372.1| K7_Puf4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 889
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 173/288 (60%), Gaps = 12/288 (4%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G+I +L KDQ+GCR LQ+ + L + + IF E D ELM D FGNY++QKL+E +
Sbjct: 567 GSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVT 626
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
EQR +L +++ F V I LN HG RA+ KL+E + ++ +V+ +LRP V L+K
Sbjct: 627 TEQRI-VLTKISSPHF--VEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSK 683
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D NG++VIQ C++ E+ +++ + ++D+C IAT + GCCVLQ C+++ Q + L
Sbjct: 684 DLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLC 743
Query: 333 AEIIANALLLAEDCYGNYVVQHLLALRVPQ----ITASLLRQLEGHYVSFSCNKYGSNVV 388
+++A L D +GNYVVQ+++ + T ++ L+ + S +K+GSNV+
Sbjct: 744 DKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVI 803
Query: 389 ERCLLESGEEQSTRIIIELLRS---PNVSMLLMHPFGNYVIQSALLVS 433
E+ L + S +I+E+L + + LL +GNYV+Q+AL +S
Sbjct: 804 EKILKTA--IVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 849
>gi|6321424|ref|NP_011501.1| Puf4p [Saccharomyces cerevisiae S288c]
gi|1723801|sp|P25339.2|PUF4_YEAST RecName: Full=Pumilio homology domain family member 4
gi|1322473|emb|CAA96714.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285812184|tpg|DAA08084.1| TPA: Puf4p [Saccharomyces cerevisiae S288c]
gi|392299246|gb|EIW10340.1| Puf4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 888
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 173/288 (60%), Gaps = 12/288 (4%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G+I +L KDQ+GCR LQ+ + L + + IF E D ELM D FGNY++QKL+E +
Sbjct: 566 GSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVT 625
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
EQR +L +++ F V I LN HG RA+ KL+E + ++ +V+ +LRP V L+K
Sbjct: 626 TEQRI-VLTKISSPHF--VEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSK 682
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D NG++VIQ C++ E+ +++ + ++D+C IAT + GCCVLQ C+++ Q + L
Sbjct: 683 DLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLC 742
Query: 333 AEIIANALLLAEDCYGNYVVQHLLALRVPQ----ITASLLRQLEGHYVSFSCNKYGSNVV 388
+++A L D +GNYVVQ+++ + T ++ L+ + S +K+GSNV+
Sbjct: 743 DKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVI 802
Query: 389 ERCLLESGEEQSTRIIIELLRS---PNVSMLLMHPFGNYVIQSALLVS 433
E+ L + S +I+E+L + + LL +GNYV+Q+AL +S
Sbjct: 803 EKILKTA--IVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 848
>gi|403215598|emb|CCK70097.1| hypothetical protein KNAG_0D03510 [Kazachstania naganishii CBS
8797]
Length = 829
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 185/340 (54%), Gaps = 17/340 (5%)
Query: 106 NHNFDGLRSNGNELSSVPRNQWMSSLSLKRNQWLQDS--FDCSSLRDLRGNIVALAKDQY 163
N+N G G PRN + L+D + ++L + G+I L KDQ+
Sbjct: 461 NYNRGGYMRGG---KGKPRNADTNYYGQDHRSKLEDGSRYVDATLEEYIGSIYTLCKDQH 517
Query: 164 GCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLML 223
GCR LQ+ + + KE ++IF E + ELM D FGNY+VQKL+E + EQRT L M+
Sbjct: 518 GCRFLQKQLDIMGKEAADVIFEETKEHTVELMTDSFGNYLVQKLIERVTIEQRTE-LSMI 576
Query: 224 TNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYC 283
+ F V I N HG RA+ KL+E +++P++ ++++ L+ V L+KD NG++VIQ C
Sbjct: 577 ASPHF--VSIAKNPHGTRALQKLIECVSSPEEAQIIISTLKDCVVVLSKDLNGNHVIQKC 634
Query: 284 VKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLA 343
++ D +++ + C IAT + GCCVLQ C+++ AQ + L +++N L
Sbjct: 635 LERLQPPDFQFIFDATCKECSSIATHRHGCCVLQRCLDFGTKAQFQSLCNVLLSNIDKLT 694
Query: 344 EDCYGNYVVQHLLALRVPQ----ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQ 399
D +GNYVVQ+++ + T + L+ S +K+GSNV+E+ L +
Sbjct: 695 LDPFGNYVVQYIVTKETERKDYDYTFKIANSLKAKMGELSVHKFGSNVIEKLLRTPVVCE 754
Query: 400 STRIIIELLR---SPNVSMLLMHPFGNYVIQSALLVSKVR 436
+ +I ELL + +LL +GNYV+Q+ L VS R
Sbjct: 755 A--LIQELLNDDSGKEIELLLNDSYGNYVLQTTLDVSHKR 792
>gi|365765603|gb|EHN07110.1| Puf4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 898
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 173/288 (60%), Gaps = 12/288 (4%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G+I +L KDQ+GCR LQ+ + L + + IF E D ELM D FGNY++QKL+E +
Sbjct: 576 GSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVT 635
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
EQR +L +++ F V I LN HG RA+ KL+E + ++ +V+ +LRP V L+K
Sbjct: 636 TEQRI-VLTKISSPHF--VEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSK 692
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D NG++VIQ C++ E+ +++ + ++D+C IAT + GCCVLQ C+++ Q + L
Sbjct: 693 DLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLC 752
Query: 333 AEIIANALLLAEDCYGNYVVQHLLALRVPQ----ITASLLRQLEGHYVSFSCNKYGSNVV 388
+++A L D +GNYVVQ+++ + T ++ L+ + S +K+GSNV+
Sbjct: 753 DKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVI 812
Query: 389 ERCLLESGEEQSTRIIIELLRS---PNVSMLLMHPFGNYVIQSALLVS 433
E+ L + S +I+E+L + + LL +GNYV+Q+AL +S
Sbjct: 813 EKILKTA--IVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 858
>gi|323333456|gb|EGA74850.1| Puf4p [Saccharomyces cerevisiae AWRI796]
Length = 896
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 173/288 (60%), Gaps = 12/288 (4%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G+I +L KDQ+GCR LQ+ + L + + IF E D ELM D FGNY++QKL+E +
Sbjct: 574 GSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVT 633
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
EQR +L +++ F V I LN HG RA+ KL+E + ++ +V+ +LRP V L+K
Sbjct: 634 TEQRI-VLTKISSPHF--VEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSK 690
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D NG++VIQ C++ E+ +++ + ++D+C IAT + GCCVLQ C+++ Q + L
Sbjct: 691 DLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLC 750
Query: 333 AEIIANALLLAEDCYGNYVVQHLLALRVPQ----ITASLLRQLEGHYVSFSCNKYGSNVV 388
+++A L D +GNYVVQ+++ + T ++ L+ + S +K+GSNV+
Sbjct: 751 DKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVI 810
Query: 389 ERCLLESGEEQSTRIIIELLRS---PNVSMLLMHPFGNYVIQSALLVS 433
E+ L + S +I+E+L + + LL +GNYV+Q+AL +S
Sbjct: 811 EKILKTA--IVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 856
>gi|190406983|gb|EDV10250.1| protein PUF4 [Saccharomyces cerevisiae RM11-1a]
Length = 894
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 173/288 (60%), Gaps = 12/288 (4%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G+I +L KDQ+GCR LQ+ + L + + IF E D ELM D FGNY++QKL+E +
Sbjct: 572 GSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVT 631
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
EQR +L +++ F V I LN HG RA+ KL+E + ++ +V+ +LRP V L+K
Sbjct: 632 TEQRI-VLTKISSPHF--VEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSK 688
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D NG++VIQ C++ E+ +++ + ++D+C IAT + GCCVLQ C+++ Q + L
Sbjct: 689 DLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLC 748
Query: 333 AEIIANALLLAEDCYGNYVVQHLLALRVPQ----ITASLLRQLEGHYVSFSCNKYGSNVV 388
+++A L D +GNYVVQ+++ + T ++ L+ + S +K+GSNV+
Sbjct: 749 DKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVI 808
Query: 389 ERCLLESGEEQSTRIIIELLRS---PNVSMLLMHPFGNYVIQSALLVS 433
E+ L + S +I+E+L + + LL +GNYV+Q+AL +S
Sbjct: 809 EKILKTA--IVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 854
>gi|151943274|gb|EDN61587.1| pumilio-homology domain family [Saccharomyces cerevisiae YJM789]
gi|259146487|emb|CAY79744.1| Puf4p [Saccharomyces cerevisiae EC1118]
Length = 892
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 173/288 (60%), Gaps = 12/288 (4%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G+I +L KDQ+GCR LQ+ + L + + IF E D ELM D FGNY++QKL+E +
Sbjct: 570 GSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVT 629
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
EQR +L +++ F V I LN HG RA+ KL+E + ++ +V+ +LRP V L+K
Sbjct: 630 TEQRI-VLTKISSPHF--VEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSK 686
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D NG++VIQ C++ E+ +++ + ++D+C IAT + GCCVLQ C+++ Q + L
Sbjct: 687 DLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLC 746
Query: 333 AEIIANALLLAEDCYGNYVVQHLLALRVPQ----ITASLLRQLEGHYVSFSCNKYGSNVV 388
+++A L D +GNYVVQ+++ + T ++ L+ + S +K+GSNV+
Sbjct: 747 DKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVI 806
Query: 389 ERCLLESGEEQSTRIIIELLRS---PNVSMLLMHPFGNYVIQSALLVS 433
E+ L + S +I+E+L + + LL +GNYV+Q+AL +S
Sbjct: 807 EKILKTA--IVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 852
>gi|71407210|ref|XP_806089.1| pumilio/PUF RNA binding protein 3 [Trypanosoma cruzi strain CL
Brener]
gi|70869728|gb|EAN84238.1| pumilio/PUF RNA binding protein 3, putative [Trypanosoma cruzi]
Length = 370
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 171/285 (60%), Gaps = 7/285 (2%)
Query: 151 LRGNIVALAKDQYGCRHLQRTM--SSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
LRG++ +AKDQ+GCR LQR + S+ E + +I EV+ V ELM D + N+++QKL
Sbjct: 5 LRGSVYEIAKDQHGCRFLQRLLGGSNGDGEFVRIIMNEVVPHVAELMTDQYANFLIQKLF 64
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
++ ++ R ++ + +++ I L HG +V K++E + + +++ ++ AL V
Sbjct: 65 DMMPQDVRYKVARVAAP---KIISIALTPHGTFSVQKMVETIASREEMDILREALSKDVV 121
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L KD +G++VIQ ++ FSH D +++ V +C IA +K GCCVLQ C+EY+ +QR
Sbjct: 122 RLVKDAHGNHVIQKVLQRFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRCLEYASCSQR 181
Query: 329 ERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
LV +I+ L +AED +GNYV+Q++L + T ++ H V NK+ SNV+
Sbjct: 182 ATLVNQILRCCLQIAEDPFGNYVLQYVLESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVI 241
Query: 389 ERCLLESGEEQSTRIIIELLRSPN-VSMLLMHPFGNYVIQSALLV 432
E+ +L + + +E + SP+ VS L+ FGNYV+Q+AL +
Sbjct: 242 EK-VLRGASQPVQEMYVETMCSPDVVSRLIQDDFGNYVLQTALTI 285
>gi|4261598|gb|AAD13898.1|S58126_1111111 Unknown [Saccharomyces cerevisiae]
gi|234327|gb|AAB19616.1| 98 kda [Saccharomyces cerevisiae]
Length = 888
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 173/288 (60%), Gaps = 12/288 (4%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G+I +L KDQ+GCR LQ+ + L + + IF E D ELM D FGNY++QKL+E +
Sbjct: 566 GSIHSLCKDQHGCRFLQKQLDILGSKAADRIFEETKDYTVELMTDSFGNYLIQKLLEEVT 625
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
EQR +L +++ F V I LN HG RA+ KL+E + ++ +V+ +LRP V L+K
Sbjct: 626 TEQRI-VLTKISSPHF--VEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSK 682
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D NG++VIQ C++ E+ +++ + ++D+C IAT + GCCVLQ C+++ Q + L
Sbjct: 683 DLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLC 742
Query: 333 AEIIANALLLAEDCYGNYVVQHLLALRVPQ----ITASLLRQLEGHYVSFSCNKYGSNVV 388
+++A L D +GNYVVQ+++ + T ++ L+ + S +K+GSNV+
Sbjct: 743 DKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVI 802
Query: 389 ERCLLESGEEQSTRIIIELLRS---PNVSMLLMHPFGNYVIQSALLVS 433
E+ L + S +I+E+L + + LL +GNYV+Q+AL +S
Sbjct: 803 EKILKTA--IVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 848
>gi|443921904|gb|ELU41432.1| pumilio-family RNA binding protein [Rhizoctonia solani AG-1 IA]
Length = 1002
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/292 (39%), Positives = 161/292 (55%), Gaps = 35/292 (11%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L DL G I AL KDQ+GCR+LQ+ + E PFGNY+ QKL
Sbjct: 565 LEDLVGEIPALCKDQHGCRYLQKKLEEGVPEH-----------------HPFGNYLCQKL 607
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLT-----NPQ----QISL 258
+E ++EQR I + +D LV I LN HG RAV K+++ L+ NP QI
Sbjct: 608 LEYSTDEQRNMICESVAHD---LVGISLNMHGTRAVQKMIDFLSTQRQANPSSYDAQIHS 664
Query: 259 VLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQH 318
++ AL VTL KD NG++VIQ C+ ED +++ N VA +C +AT + GCCVLQ
Sbjct: 665 IIMALSMHVVTLIKDLNGNHVIQKCLNRLIPEDNQFIYNAVAAHCVEVATHRHGCCVLQR 724
Query: 319 CVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSF 378
C++++ +QR +LV EI NAL L +D YGNYV H T +++RQ G+ +
Sbjct: 725 CIDHASDSQRIQLVTEITFNALTLVQDPYGNYVSCHT------SRTDAVIRQFIGNVCAL 778
Query: 379 SCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
S K+ SNV+E+C+ + +I ELL + LL FGNY +Q+AL
Sbjct: 779 SVQKFSSNVIEKCIRVAEHNTRKMLIEELLNRNRLEKLLRDSFGNYCVQTAL 830
>gi|385303007|gb|EIF47109.1| member of the puf protein family [Dekkera bruxellensis AWRI1499]
Length = 435
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 110/310 (35%), Positives = 176/310 (56%), Gaps = 24/310 (7%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F ++L D I L KDQ+GCR LQR + E IF E+ V ELMIDPFGNY
Sbjct: 22 FVNATLXDFTNEIYYLCKDQHGCRFLQRQLEVGGPEAATKIFNEIQLNVIELMIDPFGNY 81
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
++QKL+E +E+QRT ++ N Q VRI L+ HG RA+ KL+E + ++ +++++
Sbjct: 82 LIQKLLERVNEKQRT---TLVRNASSQFVRIALDPHGTRALQKLVECVNTKEEFQIIVSS 138
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L V L++D NG++VIQ C++ ++ + ++C IA + GCCVLQ C ++
Sbjct: 139 LSSYVVLLSRDLNGNHVIQKCLQKLPPSSCNFIFDAACEHCVKIAKHRHGCCVLQRCFDH 198
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALR---------------VPQITAS- 366
AQ E L ++ N + L+ D YGNYVVQ++L++ P + +
Sbjct: 199 GSPAQCENLSLKVGENXVELSTDPYGNYVVQYVLSMEETRLRSQHDEEAVANTPDTSKAI 258
Query: 367 --LLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMH-PFGN 423
++ L + V S +K+GSNVVE+ L + +I +LL+ P++ ++L+H +GN
Sbjct: 259 GLIITALRDNLVRLSTHKFGSNVVEKSL--RIPTLAPVLIGQLLKEPDIPIILLHDAYGN 316
Query: 424 YVIQSALLVS 433
YV+Q+ L V+
Sbjct: 317 YVLQTTLDVA 326
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 6/216 (2%)
Query: 227 DF--QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCV 284
DF ++ +C + HG R + + LE + P+ + + ++ + L D G+Y+IQ +
Sbjct: 29 DFTNEIYYLCKDQHGCRFLQRQLE-VGGPEAATKIFNEIQLNVIELMIDPFGNYLIQKLL 87
Query: 285 KHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVE-YSKGAQRERLVAEIIANALLLA 343
+ + + L+ + IA D G LQ VE + + + +V+ + + +LL+
Sbjct: 88 ERVNEKQRTTLVRNASSQFVRIALDPHGTRALQKLVECVNTKEEFQIIVSSLSSYVVLLS 147
Query: 344 EDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRI 403
D GN+V+Q L P + H V + +++G V++RC Q +
Sbjct: 148 RDLNGNHVIQKCLQKLPPSSCNFIFDAACEHCVKIAKHRHGCCVLQRCFDHGSPAQCENL 207
Query: 404 IIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFS 439
+++ N L P+GNYV+Q L + + RL S
Sbjct: 208 SLKV--GENXVELSTDPYGNYVVQYVLSMEETRLRS 241
>gi|367015510|ref|XP_003682254.1| hypothetical protein TDEL_0F02320 [Torulaspora delbrueckii]
gi|359749916|emb|CCE93043.1| hypothetical protein TDEL_0F02320 [Torulaspora delbrueckii]
Length = 823
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 189/339 (55%), Gaps = 30/339 (8%)
Query: 107 HNFDG---LRSNGNELSSVPRNQWMSSLSLKRNQWLQDS--FDCSSLRDLRGNIVALAKD 161
HN +G ++NGN+ +S R + ++D+ + ++L GNI +L KD
Sbjct: 464 HNKNGNQYYQNNGNDNAS-------------RQRKMEDAARYADATLDQFIGNIHSLCKD 510
Query: 162 QYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILL 221
Q+GCR LQ+ + L E + IF E + ELM D FGNY++QKL+E + EQR +
Sbjct: 511 QHGCRFLQKQLDILGSEAADSIFEETKNHTVELMTDSFGNYLIQKLLERVTVEQRITLAK 570
Query: 222 MLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQ 281
+ V I N HG RA+ KL+E + + ++ ++++ +L+ V L+KD NG++++Q
Sbjct: 571 IAAP---HFVYIASNPHGTRALQKLVECIGSKEEANIIIGSLKGSVVELSKDLNGNHIVQ 627
Query: 282 YCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALL 341
C++ D +++ + +++C IAT + GCCVLQ C+++ QR+RL ++++N
Sbjct: 628 KCLQKLQPNDVQFIFDAASEHCTEIATHRHGCCVLQRCLDHGDEVQRQRLCDKLLSNIDH 687
Query: 342 LAEDCYGNYVVQHLLALRVPQ----ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGE 397
L D +GNYVVQ+++ T +++ L+ S +K+GSNV+E+ L
Sbjct: 688 LTLDPFGNYVVQYIITKESESGNNYFTLKIVQALKSKVTELSLHKFGSNVIEKILRTPA- 746
Query: 398 EQSTRIIIELLRS---PNVSMLLMHPFGNYVIQSALLVS 433
S +I ELL S ++ LL +GNYV+Q+ L V+
Sbjct: 747 -VSDDLITELLSSRAEADIQALLNDGYGNYVLQTMLDVT 784
>gi|449018917|dbj|BAM82319.1| probable serine rich pumilio family rna binding domain pr otein
[Cyanidioschyzon merolae strain 10D]
Length = 910
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 163/305 (53%), Gaps = 20/305 (6%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G + +A+DQ G R+LQ + + +IF E EL +DPFGNY+ QKL E C+
Sbjct: 564 GRMALMARDQQGGRYLQARLDVKNAADTALIFEECRPHFVELAMDPFGNYLCQKLFEHCN 623
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
EQR L ++ QL ++C++ HG R V K++E P+ +L+ A+ P ++L
Sbjct: 624 REQR---LELIRQSASQLAQVCMDPHGTRVVQKMIELTVEPEHAALIAQAISPHCLSLMC 680
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D NG++VIQ C++ +++ + IA + GCCVLQ C++++ QR L
Sbjct: 681 DVNGNHVIQRCLQRMDVPLRRFIYDTALTRYLEIARHRHGCCVLQRCLDHATAEQRSNLC 740
Query: 333 AEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCL 392
A I+ +A L +D +GNYVVQ++L L+ P T ++++++ GH S K+ SNVVE+
Sbjct: 741 ALILNSAYELMQDPFGNYVVQYVLELKEPSYTRAIIQRIRGHLWQLSMQKFSSNVVEKVF 800
Query: 393 LESGEEQSTRIIIELLRSP-----------------NVSMLLMHPFGNYVIQSALLVSKV 435
+ E ++ ELL P N+ LL P+ NYV+Q AL ++
Sbjct: 801 TMANERDLRSLLHELLEGPQSVESMPLQVGSEQHQRNIRPLLFDPYANYVVQRALSLAPS 860
Query: 436 RLFSS 440
+F +
Sbjct: 861 PVFEA 865
>gi|325187460|emb|CCA21998.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 888
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 111/333 (33%), Positives = 187/333 (56%), Gaps = 28/333 (8%)
Query: 112 LRSNGNELSSVP-RNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQR 170
LR N N +S+V R+ +++LS+ S D++G + +++KDQ GCR LQ
Sbjct: 501 LRKNSNGISNVAQRSGALTTLSI-------------SEEDIKGRVYSMSKDQNGCRLLQE 547
Query: 171 TMSSLPKEEI-EMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQ 229
+ ++ + ++IF E + + E+M+DPFGNY+ QKL+ E QR I+ +
Sbjct: 548 QLEYDDRKTLWQIIFQESLHHLPEMMVDPFGNYLFQKLIARADEWQRLAIVRAVCP---H 604
Query: 230 LVRICLNTHGIRAVLKLLE----------NLTNPQQISLVLAALRPGAVTLTKDTNGHYV 279
L+ LN HG R+V K++E + T+ L++ AL+ AV L D+NG++V
Sbjct: 605 LMAAALNLHGTRSVQKVVEICAISQSEKKDATSIDLPQLIVHALKDDAVRLCIDSNGNHV 664
Query: 280 IQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANA 339
IQ +++F+ + T+++ + V+ C + T + GCCVLQ C++ + Q++ L+A++ +A
Sbjct: 665 IQRALQYFNPKFTQFIFDAVSRECTTVGTHRHGCCVLQRCLDAANVTQKKELIAQVEYHA 724
Query: 340 LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQ 399
+ L +D YGNYVVQ++L + ++ + GH S K+ SNVVE+CL ++ E
Sbjct: 725 MKLMQDPYGNYVVQYVLDACTAEEAIGIMMKPLGHVFELSIQKFSSNVVEKCLEKAPERI 784
Query: 400 STRIIIELLRSPNVSMLLMHPFGNYVIQSALLV 432
R + EL+ + LL F NYV+Q AL V
Sbjct: 785 RRRYVEELIVCAKMQRLLQDQFANYVVQRALCV 817
>gi|357445491|ref|XP_003593023.1| Pumilio homology domain family member [Medicago truncatula]
gi|355482071|gb|AES63274.1| Pumilio homology domain family member [Medicago truncatula]
Length = 454
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 108/297 (36%), Positives = 176/297 (59%), Gaps = 9/297 (3%)
Query: 152 RGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE-- 209
RG +V++A + C++LQ + + MI +EV D + ELM FG+Y++QK+ +
Sbjct: 106 RGFVVSMAMNHRECQYLQAVIDEGNPVYVTMILLEVKDYLHELMTHRFGSYLIQKIFQAR 165
Query: 210 --LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+ ++ + L+++N +L +C++ HG RA+ ++ N+ +P +V+ L+
Sbjct: 166 RGMTCQQMDLTVFLIISNHR-KLKDVCMDHHGTRAMQTMIANVRHPFTGYVVVYMLQHIT 224
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS-KGA 326
+ L K+ NG YVI CVK F + K +L+EVA NC IATDK GC ++ C++Y + +
Sbjct: 225 IPLMKNVNGSYVIVQCVKFFPPKHKKIILDEVARNCVDIATDKIGCSAVKKCLDYGGRTS 284
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ LVA+II+NA++L+ED YGNYVVQ ++ +++P ++++L + S NKY SN
Sbjct: 285 AIDILVAQIISNAMILSEDPYGNYVVQRVIQMKIPLANEQMVQELRSKFDRLSVNKYASN 344
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK---VRLFSS 440
VVE L S ++ I E++RS N +L P+GNYV Q AL +K R FSS
Sbjct: 345 VVEYLLSFSNQDAVKVIAEEIMRSRNFLNVLHDPYGNYVAQRALRCTKGHVRRRFSS 401
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 105/231 (45%), Gaps = 6/231 (2%)
Query: 161 DQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVC-ELMIDPFGNYVVQKLVELCSEEQRTRI 219
D +G R +Q ++++ + V ++ + LM + G+YV+ + V+ + + I
Sbjct: 193 DHHGTRAMQTMIANVRHPFTGYVVVYMLQHITIPLMKNVNGSYVIVQCVKFFPPKHKKII 252
Query: 220 LLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYV 279
L + + V I + G AV K L+ I +++A + A+ L++D G+YV
Sbjct: 253 LDEVARN---CVDIATDKIGCSAVKKCLDYGGRTSAIDILVAQIISNAMILSEDPYGNYV 309
Query: 280 IQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA-- 337
+Q ++ + ++ E+ ++ +K V+++ + +S + + EI+
Sbjct: 310 VQRVIQMKIPLANEQMVQELRSKFDRLSVNKYASNVVEYLLSFSNQDAVKVIAEEIMRSR 369
Query: 338 NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
N L + D YGNYV Q L + ++ H ++ + YG NV+
Sbjct: 370 NFLNVLHDPYGNYVAQRALRCTKGHVRRRFSSLIKSHRLALQSHIYGKNVL 420
>gi|67481757|ref|XP_656228.1| pumilio domain-containing protein C6G9.14 [Entamoeba histolytica
HM-1:IMSS]
gi|56473414|gb|EAL50842.1| pumilio domain-containing protein C6G9.14, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 476
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 171/295 (57%), Gaps = 7/295 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ D + + DQYGCR+LQR + + + IF +++ + LM DPFGNY+ QKL
Sbjct: 148 ISDFGSDFSKMCHDQYGCRYLQRQLEDNNPQTTKCIFEQMLPIITLLMSDPFGNYLCQKL 207
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E+ + EQR +I+ +T F + + N HG R++ KL+ + ++ ++++ + P
Sbjct: 208 IEVVNSEQRIQIITKITPTFFIISK---NIHGTRSIQKLISCYSTKEEQNMLINVISPYV 264
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVAD--NCYGIATDKSGCCVLQHCVEYSKG 325
+ L D+NG++VIQ C+K F D +++ + + N +AT K GCCV+Q C++Y
Sbjct: 265 IELIFDSNGNHVIQECLKTFGKSDNRFIFDAIVSDGNLVKVATHKHGCCVVQRCIDYGNR 324
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
Q L+ EI+ N+L+L +D +GNYVVQ++L + + + + + L + S K+ S
Sbjct: 325 QQLITLIDEIVKNSLVLVKDAFGNYVVQYILNVDIVGVINDVTKMLLDDLIDLSMQKFSS 384
Query: 386 NVVERCLLESGEEQSTRIIIE-LLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFS 439
NV+E+ L+ S E ++ ++I + L+ +V+ LL + NYVIQ+ L S V S
Sbjct: 385 NVIEK-LVRSDEIEARQMIFDRFLQIKDVTKLLQDSYANYVIQTCLDQSSVEYHS 438
>gi|363755368|ref|XP_003647899.1| hypothetical protein Ecym_7236 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891935|gb|AET41082.1| hypothetical protein Ecym_7236 [Eremothecium cymbalariae
DBVPG#7215]
Length = 731
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 169/302 (55%), Gaps = 23/302 (7%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+ L + G I +L KDQ+GCR LQR + E IF E V ELM D FGNY++Q
Sbjct: 402 AKLEEYIGKIYSLCKDQHGCRFLQRQLDIGGSEAATSIFEETNQYVVELMTDSFGNYLIQ 461
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KLVE +EEQR + ++ + + V I L+ HG RA+ KL+E + + ++++LR
Sbjct: 462 KLVERVTEEQR---ITLVKSSAPRFVSIALDPHGTRALQKLVECIDTEVESQTIISSLRD 518
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
V L++D NG++V+Q C++ S +++++ + C IAT + GCCVLQ C+++
Sbjct: 519 SVVELSRDLNGNHVVQKCLQRLSSAESQFIFDAACKECVKIATHRHGCCVLQRCLDHGNK 578
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP-----QITASLLRQLEGHYVSFSC 380
QR++L I+ N LL D +GNYVVQ++L + T ++ L+ + S
Sbjct: 579 EQRKQLCDNILDNVNLLTLDPFGNYVVQYILTKESELGSNHRHTHEIVNILKPRIIELSL 638
Query: 381 NKYGSNVVERCLLESGEEQSTRIIIELL--------RSPNVSMLLMHPFGNYVIQSALLV 432
+K+GSNVVE+ L T I+ E++ S + LL FGNYV+Q+AL V
Sbjct: 639 HKFGSNVVEKIL-------RTPIVAEIMIAELLNTGASHGIEQLLHDGFGNYVLQTALDV 691
Query: 433 SK 434
+K
Sbjct: 692 AK 693
>gi|218192238|gb|EEC74665.1| hypothetical protein OsI_10341 [Oryza sativa Indica Group]
Length = 671
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/289 (37%), Positives = 164/289 (56%), Gaps = 38/289 (13%)
Query: 152 RGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELC 211
+G I +AKDQ GCR LQ+ K++ ++IF +ID + ELM + F NY+VQKL+++C
Sbjct: 393 KGYIYFMAKDQNGCRFLQQKFEE-GKDQADLIFEGIIDHIPELMANSFANYLVQKLLDVC 451
Query: 212 SEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLT 271
EEQR RI+ +LT D +L+R+ LN+HG R++ KL+E + +QI L+++AL+PG + L
Sbjct: 452 DEEQRLRIIAILTEDPVKLLRVSLNSHGTRSIQKLIETVKTRKQIMLIISALQPGFIHLV 511
Query: 272 KDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERL 331
D NG++VIQ C+K+F E+ K ++ + D Y K+ VL
Sbjct: 512 NDPNGNHVIQKCLKNFDAEENK-IIYDGTDTHY-----KNSLNVLT-------------- 551
Query: 332 VAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERC 391
NYV+Q++L L++P A L +G+YV S K GSNVVE+C
Sbjct: 552 -----------------NYVIQYVLDLKIPFANAQLASLFQGNYVYLSKQKVGSNVVEKC 594
Query: 392 LLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSS 440
L ++ II EL+ + + LL P+ NYVI +AL ++ L S+
Sbjct: 595 LKVFPDDDKAAIIWELISASHFEQLLQDPYANYVIHTALAQTRGHLRSA 643
>gi|66815363|ref|XP_641698.1| hypothetical protein DDB_G0279557 [Dictyostelium discoideum AX4]
gi|60469729|gb|EAL67717.1| hypothetical protein DDB_G0279557 [Dictyostelium discoideum AX4]
Length = 782
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 176/312 (56%), Gaps = 7/312 (2%)
Query: 123 PRNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEE-IE 181
PR S+S+ C+SL ++ G I L K Q GCR LQ+ + P E +
Sbjct: 443 PRKPMTKSVSMSSIGLNNQDPKCTSLEEITGQIYHLTKYQAGCRFLQKKLEEKPDSEHVT 502
Query: 182 MIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIR 241
+IF EV D + ELMIDP+G Y++ +L++ C QR +I+ + + + +GI
Sbjct: 503 LIFNEVFDHLNELMIDPYGQYLIPQLMKYCDNNQRRQIVDKIAPS---VETFACHVYGIH 559
Query: 242 AVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVAD 301
+ KLL+ L+ P Q+ ++A+++ + L+KD G+Y+IQ +K FS E +++ + +
Sbjct: 560 GIQKLLQYLS-PDQVESIIASIKGKVIQLSKDNKGNYLIQSFLKQFSPEVNQFVCDAIMG 618
Query: 302 NCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP 361
N I T K GC V+ C++ + Q E+LV +I ++L L +D +GNYVVQHLL+ +
Sbjct: 619 NIEEICTHKVGCTVVNRCIDNANPEQLEKLVDKITEHSLKLVQDQFGNYVVQHLLS-KNK 677
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
++ L+ L+ + S K+ SNV+E+C L+ + + +II+ L ++ LL +
Sbjct: 678 AYSSKLIVSLKDNIAELSIQKFSSNVIEKC-LQLADTPTYELIIKALTEADILSLLQDKY 736
Query: 422 GNYVIQSALLVS 433
N+VIQ+AL VS
Sbjct: 737 ANFVIQTALDVS 748
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 4/202 (1%)
Query: 239 GIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNE 298
G R + K LE + + ++L+ + L D G Y+I +K+ + + ++++
Sbjct: 484 GCRFLQKKLEEKPDSEHVTLIFNEVFDHLNELMIDPYGQYLIPQLMKYCDNNQRRQIVDK 543
Query: 299 VADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLAL 358
+A + A G +Q ++Y Q E ++A I + L++D GNY++Q L
Sbjct: 544 IAPSVETFACHVYGIHGIQKLLQYLSPDQVESIIASIKGKVIQLSKDNKGNYLIQSFLKQ 603
Query: 359 RVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLM 418
P++ + + G+ +K G VV RC+ + EQ +++ ++ + L+
Sbjct: 604 FSPEVNQFVCDAIMGNIEEICTHKVGCTVVNRCIDNANPEQLEKLVDKITE--HSLKLVQ 661
Query: 419 HPFGNYVIQSALLVSKVRLFSS 440
FGNYV+Q L+SK + +SS
Sbjct: 662 DQFGNYVVQH--LLSKNKAYSS 681
>gi|365986156|ref|XP_003669910.1| hypothetical protein NDAI_0D03530 [Naumovozyma dairenensis CBS 421]
gi|343768679|emb|CCD24667.1| hypothetical protein NDAI_0D03530 [Naumovozyma dairenensis CBS 421]
Length = 809
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 166/293 (56%), Gaps = 10/293 (3%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
++L GNI +L KDQ+GCR LQ+ + L E + IF E ELM D FGNY++Q
Sbjct: 483 ATLDQFAGNIYSLCKDQHGCRFLQKQLDILGTEAADKIFEETKYHTIELMTDSFGNYLIQ 542
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E S EQRT + + + Q V I L+ HG RA+ KL+E + + +++A+L
Sbjct: 543 KLIERVSTEQRTELAKIASP---QFVEIALDPHGTRALQKLIECIDTDDEAKIIVASLSG 599
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
V L+KD NG++V+Q C++ +D +++ + N IAT + GCCVLQ C ++
Sbjct: 600 SIVQLSKDLNGNHVVQKCLQKLHPKDFQFIFDATCQNSVDIATHRHGCCVLQRCFDHGTK 659
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ----ITASLLRQLEGHYVSFSCN 381
Q E L E++ + L D +GNYVVQ+++ + T ++ L+ S +
Sbjct: 660 EQCETLCDELLKHVDKLTLDPFGNYVVQYIITKETEKDKFDYTHKIVHLLKPKIAELSVH 719
Query: 382 KYGSNVVERCLLESGEEQSTRIIIELL-RSPNVSMLLMHPFGNYVIQSALLVS 433
K+GSNV+E+ L ++ +I+ELL ++ LL +GNYV+Q+AL +S
Sbjct: 720 KFGSNVIEKLLRTPVATEN--MILELLNHKADIPNLLNDSYGNYVLQTALDIS 770
>gi|354543476|emb|CCE40195.1| hypothetical protein CPAR2_102330 [Candida parapsilosis]
Length = 860
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/342 (34%), Positives = 187/342 (54%), Gaps = 50/342 (14%)
Query: 141 DSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMS----------------SLPKEEIE--- 181
+ + + ++D RG+I+ L DQ+GCR LQR ++ S EI+
Sbjct: 491 NKYQNAKIQDYRGHILDLCSDQHGCRFLQRELAKEQDCLLKRDDNKSDGSKGDGEIKDES 550
Query: 182 ---MIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH 238
MIF E+ D V LM+DPFGNY++QKLVE S EQR ++ ++ Q RI L++H
Sbjct: 551 VSTMIFNELHDEVVNLMLDPFGNYLIQKLVECVSNEQRLELIKYSSS---QFNRIALDSH 607
Query: 239 GIRAVLKLLE----NLTNPQQI-------SLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
G RA+ KL+E + N +++ SL++ +L P V L++D NG++V+Q C+ +
Sbjct: 608 GTRALQKLIECVGASHDNQEEVVDENDSASLIIKSLEPSIVLLSRDLNGNHVVQKCLINL 667
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S++ + + + + NC +A + GCCV+Q C++Y Q E L E+ + D Y
Sbjct: 668 SNKVNQVIYDTITSNCEVVACHRHGCCVIQRCLDYGNDRQVETLSHEVTTKLGVFTTDPY 727
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCL-------LESGEE-- 398
GNYVVQ++L+ Q ++ L H+ S +K+GSNV+E+ L E+ EE
Sbjct: 728 GNYVVQYVLSHGDSQSIDTIFAYLRDHFYQLSIHKFGSNVLEKSLRLEQKGKKENEEENN 787
Query: 399 ---QSTRIIIELLR--SPNVSMLLMHPFGNYVIQSALLVSKV 435
+S +I ELL+ S S +L FGNYV+Q+ L V+++
Sbjct: 788 SSTRSASLIDELLKLSSDQFSTVLNDSFGNYVLQTCLDVAQL 829
>gi|9757838|dbj|BAB08275.1| unnamed protein product [Arabidopsis thaliana]
Length = 546
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/285 (39%), Positives = 168/285 (58%), Gaps = 9/285 (3%)
Query: 157 ALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQR 216
A AKD+ L ++ KE ++ I+ +I +CELM+DP+G+ VVQ L+ CS EQ
Sbjct: 207 AFAKDKEMSERLGMSIFQGTKETVDAIYNGLIGDICELMVDPYGSDVVQLLMRRCSSEQI 266
Query: 217 TRILLMLTNDDFQLVRICLNTHGIRAVLKLLE--NLTNPQQISLVLAALRPGAVTLTKDT 274
+++ ++T FQ V IC+++ G A+ LL N QI ++ +R A+ L+K
Sbjct: 267 VQLVDIVTQQMFQFVNICIDSLGTNAIQVLLTCINERAKDQIPRIVDVVRTVALQLSKSN 326
Query: 275 NGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ---RERL 331
+ +VI C + F + LL + NC+ IA D+ GCC+LQ C + R+RL
Sbjct: 327 HAIFVILACFRLFPLH-CRLLLELIVQNCHQIAIDQHGCCLLQLCFNKDRVPNLEIRQRL 385
Query: 332 VAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERC 391
+ E IANAL L +CYGNYVVQ+++ L + +L+RQL G+Y + NKYGS+ V++
Sbjct: 386 IMEAIANALRLCLNCYGNYVVQYIVELNNRYLIDALVRQLIGNYAHLARNKYGSHAVQK- 444
Query: 392 LLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVR 436
LL+ S I+I+LLR + LL+ PFGNYVIQ+A VSKVR
Sbjct: 445 LLKLRWIDSRVIVIDLLRE--IDTLLLDPFGNYVIQTAWFVSKVR 487
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 136 NQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELM 195
N++L D+ +R L GN LA+++YG +Q+ + L + +I ++++ + L+
Sbjct: 414 NRYLIDAL----VRQLIGNYAHLARNKYGSHAVQKLL-KLRWIDSRVIVIDLLREIDTLL 468
Query: 196 IDPFGNYVVQ 205
+DPFGNYV+Q
Sbjct: 469 LDPFGNYVIQ 478
>gi|449710016|gb|EMD49164.1| pumilio domain containing protein [Entamoeba histolytica KU27]
Length = 476
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 170/295 (57%), Gaps = 7/295 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ D + + DQYGCR+LQR + + + IF +++ + LM DPFGNY+ QKL
Sbjct: 148 ISDFGSDFSKMCHDQYGCRYLQRQLEDNNPQTTKCIFEQMLPIITLLMSDPFGNYLCQKL 207
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E+ + EQR +I+ +T F + + N HG R++ KL+ + ++ ++++ + P
Sbjct: 208 IEVVNSEQRIQIITKITPTFFIISK---NIHGTRSIQKLISCYSTKEEQNMLINVISPYV 264
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVAD--NCYGIATDKSGCCVLQHCVEYSKG 325
+ L D+NG++VIQ C+K F D ++ + + N +AT K GCCV+Q C++Y
Sbjct: 265 IELIFDSNGNHVIQECLKTFGKSDNGFIFDAIVSDGNLVKVATHKHGCCVVQRCIDYGNR 324
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
Q L+ EI+ N+L+L +D +GNYVVQ++L + + + + + L + S K+ S
Sbjct: 325 QQLITLIDEIVKNSLVLVKDAFGNYVVQYILNVDIVGVINDVTKMLLDDLIDLSMQKFSS 384
Query: 386 NVVERCLLESGEEQSTRIIIE-LLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFS 439
NV+E+ L+ S E ++ ++I + L+ +V+ LL + NYVIQ+ L S V S
Sbjct: 385 NVIEK-LVRSDEIEARQMIFDRFLQIKDVTKLLQDSYANYVIQTCLDQSSVEYHS 438
>gi|384494806|gb|EIE85297.1| hypothetical protein RO3G_10007 [Rhizopus delemar RA 99-880]
Length = 416
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 158/288 (54%), Gaps = 35/288 (12%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F +L +++ I L KDQ GCR+LQ+ + E+ E+IF +V ELM +
Sbjct: 91 FASVNLEEMKDEIYLLCKDQNGCRYLQKKLEETNLEQREIIFNQVYPHFVELMTE----- 145
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
I LN HG RAV +++E ++ +QI ++ A
Sbjct: 146 ------------------------------ISLNMHGTRAVQRMIELISLDEQIQAIVKA 175
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
P VTL KD NG++VIQ C+ F+ + +++ + V++NC +AT + GCCVLQ C++Y
Sbjct: 176 FSPIVVTLIKDINGNHVIQKCLHRFTTKHKQFIYDAVSENCIEVATHRHGCCVLQRCIDY 235
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
S Q ++LV EII++AL L +D YGNYVVQ++L L + + L+RQ G+ S K
Sbjct: 236 SANHQTKQLVDEIISHALTLVQDPYGNYVVQYVLELGDAKFSDRLIRQFIGNLSKLSIQK 295
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
Y SNV+E+C+ + E+ +I E++ + LL + NYV+Q+AL
Sbjct: 296 YSSNVMEKCIRVAEEDTRHDLIQEMMNKDRLEKLLKDSYANYVVQTAL 343
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 10/158 (6%)
Query: 131 LSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
+ K Q++ D+ + N + +A ++GC LQR + + + + E+I
Sbjct: 200 FTTKHKQFIYDA--------VSENCIEVATHRHGCCVLQRCIDYSANHQTKQLVDEIISH 251
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
L+ DP+GNYVVQ ++EL + R++ + +L +++ + +++ E
Sbjct: 252 ALTLVQDPYGNYVVQYVLELGDAKFSDRLIRQFIGNLSKLSIQKYSSNVMEKCIRVAEED 311
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFS 288
T I ++ R L KD+ +YV+Q + + S
Sbjct: 312 TRHDLIQEMMNKDR--LEKLLKDSYANYVVQTALDYAS 347
>gi|50302921|ref|XP_451398.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640529|emb|CAH02986.1| KLLA0A09097p [Kluyveromyces lactis]
Length = 805
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 174/296 (58%), Gaps = 14/296 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L G+I +L KDQ+GCR LQR + +E I+ E+ D +CELM DPFGNY++QKL
Sbjct: 477 LEQFVGSIYSLCKDQHGCRFLQRQLDENGEEVASTIYSEIKDHICELMNDPFGNYLMQKL 536
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ R I+ N Q + I L+ HG RA+ KL+E ++ +++A+L+P
Sbjct: 537 FERINQRDRVEIV---KNCSPQFMDIALDAHGTRALQKLVECTDTEEETQILVASLQPSI 593
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
++L++D ++V+Q +++FS++DT+++ + D+ I+ ++GCCV+Q C+++ Q
Sbjct: 594 LSLSRDFKSNHVVQKMLENFSNKDTQFIYDAACDDIIKISNHRNGCCVVQRCLDFGNTEQ 653
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITAS------LLRQLEGHYVSFSCN 381
+ L +I+ + L + YGNYV+Q++L Q T ++ L+ + + S N
Sbjct: 654 LDALCGKIVEKSFELTMNPYGNYVIQYILTKEKDQATPDFKYTKKIVDVLKFNAIDLSLN 713
Query: 382 KYGSNVVERCLLESGEEQSTRIIIELLRSPNVSML--LMH-PFGNYVIQSALLVSK 434
K+GSNVVE L S +I ++L S + S L L+H +GNYV+Q+AL + K
Sbjct: 714 KFGSNVVESILRTPAV--SDVMITKILNSNDESGLLKLLHDSYGNYVLQTALDIVK 767
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/136 (19%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Query: 295 LLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQH 354
+L + + Y + D+ GC LQ ++ + + +EI + L D +GNY++Q
Sbjct: 476 VLEQFVGSIYSLCKDQHGCRFLQRQLDENGEEVASTIYSEIKDHICELMNDPFGNYLMQK 535
Query: 355 LLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVS 414
L + +++ ++ + + +G+ +++ + + E+ T+I++ L+ P++
Sbjct: 536 LFERINQRDRVEIVKNCSPQFMDIALDAHGTRALQKLVECTDTEEETQILVASLQ-PSIL 594
Query: 415 MLLMHPFGNYVIQSAL 430
L N+V+Q L
Sbjct: 595 SLSRDFKSNHVVQKML 610
>gi|385303897|gb|EIF47942.1| member of the puf protein family [Dekkera bruxellensis AWRI1499]
Length = 591
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/286 (35%), Positives = 163/286 (56%), Gaps = 7/286 (2%)
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSE 213
N++ LA+DQ GCR+LQR + + IF V ELM+DPFGNY++QK++ C+
Sbjct: 268 NVLELARDQCGCRYLQRKLDEGXXDSFAQIFGPVCAHAAELMMDPFGNYLMQKVMGCCTV 327
Query: 214 EQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKD 273
EQ +L+ L + ++ HG RA+ KL+E + +Q L+ L P V L D
Sbjct: 328 EQLDAVLISAGPS---LCAVAVDQHGTRALQKLIERIXTRKQRMLLERYLAPYVVALIGD 384
Query: 274 TNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVA 333
NG++VIQ CV+ F D ++++++++ N ++T K GCCVLQ + Q E+L
Sbjct: 385 LNGNHVIQKCVQRFRDSDLQFIVDQISANIVPVSTHKHGCCVLQKLLNKCNMQQIEQLGX 444
Query: 334 EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCL- 392
+I+ ++L L ED Y NYVVQ+L ++ + + A LL + SC K+ SNVVE+CL
Sbjct: 445 QIVQHSLALMEDQYANYVVQYLASMEIDSLNAQLLATVAPCVRQLSCQKFSSNVVEKCLR 504
Query: 393 ---LESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKV 435
+ +R++ E+L + +L+ +GNYV+Q+A+ VS
Sbjct: 505 IRSYRVFSQFVSRLLDEILLPDVLPVLIRDQYGNYVVQTAMEVSSA 550
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 18/250 (7%)
Query: 136 NQWLQDSFDCSSLRDLRGNIV-------ALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q C ++ L ++ A+A DQ+G R LQ+ + + + M+ +
Sbjct: 315 NYLMQKVMGCCTVEQLDAVLISAGPSLCAVAVDQHGTRALQKLIERIXTRKQRMLLERYL 374
Query: 189 D-RVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
V L+ D GN+V+QK V+ + I+ ++ + +V + + HG + KLL
Sbjct: 375 APYVVALIGDLNGNHVIQKCVQRFRDSDLQFIVDQISAN---IVPVSTHKHGCCVLQKLL 431
Query: 248 ENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIA 307
N N QQI + + ++ L +D +YV+QY LL VA ++
Sbjct: 432 -NKCNMQQIEQLGXQIVQHSLALMEDQYANYVVQYLASMEIDSLNAQLLATVAPCVRQLS 490
Query: 308 TDKSGCCVLQHCVE---YSKGAQ-RERLVAEIIANALL--LAEDCYGNYVVQHLLALRVP 361
K V++ C+ Y +Q RL+ EI+ +L L D YGNYVVQ + +
Sbjct: 491 CQKFSSNVVEKCLRIRSYRVFSQFVSRLLDEILLPDVLPVLIRDQYGNYVVQTAMEVSSA 550
Query: 362 QITASLLRQL 371
+ R+L
Sbjct: 551 EYKLRFAREL 560
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 16/159 (10%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+ NIV ++ ++GC LQ+ ++ ++IE + +++ LM D + NYVVQ L +
Sbjct: 410 ISANIVPVSTHKHGCCVLQKLLNKCNMQQIEQLGXQIVQHSLALMEDQYANYVVQYLASM 469
Query: 211 CSEEQRTRILLMLTNDDFQL---------VRICLNTHGIRAVLKLLENLTNPQQISLVLA 261
+ ++L + QL V CL R + + L + ++L
Sbjct: 470 EIDSLNAQLLATVAPCVRQLSCQKFSSNVVEKCLRIRSYRVFSQFVSRLLD----EILLP 525
Query: 262 ALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVA 300
+ P L +D G+YV+Q ++ S E E+A
Sbjct: 526 DVLP---VLIRDQYGNYVVQTAMEVSSAEYKLRFARELA 561
>gi|300175939|emb|CBK21935.2| unnamed protein product [Blastocystis hominis]
Length = 544
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 105/281 (37%), Positives = 160/281 (56%), Gaps = 3/281 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+ LR ++V +AK+ GCR LQ+ + + + IF E+ + ELM DPFGNYV Q L
Sbjct: 217 LKGLRDHVVDMAKNYNGCRALQQILLTASPAAVTEIFEELQSSLRELMTDPFGNYVFQML 276
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+++CSEE+R +IL + DF ++ LN HG R V L++ ++P I + AAL+
Sbjct: 277 LQVCSEERRAQILSAVR--DF-VIDASLNIHGTRCVQSLVQYCSSPSMIDSLFAALQGHI 333
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
L NG++VI C++ L E+ +C IAT + GCCV+Q +
Sbjct: 334 AHLAAHPNGNHVILRCLQSIPESFCTPLFEELVQHCIDIATHRHGCCVIQQFFLRAPPLY 393
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R RL+ I+ A LL + +GNYVVQ +L P+ L R + GH V +SC KY SNV
Sbjct: 394 RNRLMNAILHEAHLLITNPFGNYVVQFVLERGRPEERELLTRSVFGHVVEYSCQKYSSNV 453
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQS 428
+E+ ++ + E+ +II E++ SP+ +L H F NY+IQ+
Sbjct: 454 IEKVIVLADEQVRYQIICEIVGSPHFPAILHHNFANYIIQN 494
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 4/203 (1%)
Query: 229 QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFS 288
+V + N +G RA+ ++L +P ++ + L+ L D G+YV Q ++ S
Sbjct: 223 HVVDMAKNYNGCRALQQILLT-ASPAAVTEIFEELQSSLRELMTDPFGNYVFQMLLQVCS 281
Query: 289 HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGAQRERLVAEIIANALLLAEDCY 347
E +L+ V D + + G +Q V+Y S + + L A + + LA
Sbjct: 282 EERRAQILSAVRDFVIDASLNIHGTRCVQSLVQYCSSPSMIDSLFAALQGHIAHLAAHPN 341
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GN+V+ L L +L H + + +++G V+++ L + R++ +
Sbjct: 342 GNHVILRCLQSIPESFCTPLFEELVQHCIDIATHRHGCCVIQQFFLRAPPLYRNRLMNAI 401
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
L +L+ +PFGNYV+Q L
Sbjct: 402 LHE--AHLLITNPFGNYVVQFVL 422
>gi|207345268|gb|EDZ72145.1| YGL014Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 349
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 173/288 (60%), Gaps = 12/288 (4%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G+I +L KDQ+GCR LQ+ + L + + IF E D ELM D FGNY++QKL+E +
Sbjct: 27 GSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVT 86
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
EQR +L +++ F V I LN HG RA+ KL+E + ++ +V+ +LRP V L+K
Sbjct: 87 TEQRI-VLTKISSPHF--VEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSK 143
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D NG++VIQ C++ E+ +++ + ++D+C IAT + GCCVLQ C+++ Q + L
Sbjct: 144 DLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLC 203
Query: 333 AEIIANALLLAEDCYGNYVVQHLLALRVPQ----ITASLLRQLEGHYVSFSCNKYGSNVV 388
+++A L D +GNYVVQ+++ + T ++ L+ + S +K+GSNV+
Sbjct: 204 DKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVI 263
Query: 389 ERCLLESGEEQSTRIIIELLRS---PNVSMLLMHPFGNYVIQSALLVS 433
E+ L + S +I+E+L + + LL +GNYV+Q+AL +S
Sbjct: 264 EKILKTAI--VSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 309
>gi|156844826|ref|XP_001645474.1| hypothetical protein Kpol_1061p41 [Vanderwaltozyma polyspora DSM
70294]
gi|156116137|gb|EDO17616.1| hypothetical protein Kpol_1061p41 [Vanderwaltozyma polyspora DSM
70294]
Length = 739
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 186/343 (54%), Gaps = 26/343 (7%)
Query: 102 NLLHNHNFD--GLRSNGNELSSVPRNQWMSSLSLKRNQWLQDS--FDCSSLRDLRGNIVA 157
N HN N + G NGN RN + K ++DS + ++L G I +
Sbjct: 373 NKFHNGNKNSYGRNKNGN------RNGYNGYHQRK----MEDSLIYSNATLDQFIGEIYS 422
Query: 158 LAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRT 217
L KDQ+GCR LQ+ + + + IF E + ELM D FGNY++QKL+E + EQR
Sbjct: 423 LCKDQHGCRFLQKQLDVMGENAANAIFNETKEHTVELMTDSFGNYLIQKLLERVTVEQRL 482
Query: 218 RILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGH 277
I + V I LN HG RA+ KL+E + ++ LV+ +L+P V L+KD NG+
Sbjct: 483 EIAQISAP---YFVDIALNPHGTRALQKLVECVGTEEEAQLVVDSLQPSIVELSKDLNGN 539
Query: 278 YVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA 337
+V+Q C++ +++ + + +C IAT + GCCVLQ C+++ QR L +++
Sbjct: 540 HVVQKCLQKLDPTYFQFIFDAASQDCVDIATQRHGCCVLQRCLDHGNKDQRRGLCEMLLS 599
Query: 338 NALLLAEDCYGNYVVQHLLALRVPQ----ITASLLRQLEGHYVSFSCNKYGSNVVERCLL 393
N L+ D +GNYVVQ+++ + + ++ L+ S +K+GSNVVE+ L
Sbjct: 600 NIDQLSIDPFGNYVVQYVITKESEEKAFDYSYKIVEVLKPKVKDLSLHKFGSNVVEKILK 659
Query: 394 ESGEEQSTRIIIELLRSPN---VSMLLMHPFGNYVIQSALLVS 433
S +I+ELL++ + + MLL +GNYV+Q+AL VS
Sbjct: 660 TPA--LSEPLILELLKNNDESEIQMLLNDSYGNYVLQTALDVS 700
>gi|385252070|pdb|4DZS|A Chain A, Crystal Structure Of Yeast Puf4p Rna Binding Domain In
Complex With Ho-4be Mutant Rna
gi|385252071|pdb|4DZS|B Chain B, Crystal Structure Of Yeast Puf4p Rna Binding Domain In
Complex With Ho-4be Mutant Rna
Length = 357
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 173/288 (60%), Gaps = 12/288 (4%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G+I +L KDQ+GCR LQ+ + L + + IF E D ELM D FGNY++QKL+E +
Sbjct: 35 GSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVT 94
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
EQR +L +++ F V I LN HG RA+ KL+E + ++ +V+ +LRP V L+K
Sbjct: 95 TEQRI-VLTKISSPHF--VEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSK 151
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D NG++VIQ C++ E+ +++ + ++D+C IAT + GCCVLQ C+++ Q + L
Sbjct: 152 DLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLC 211
Query: 333 AEIIANALLLAEDCYGNYVVQHLLALRVPQ----ITASLLRQLEGHYVSFSCNKYGSNVV 388
+++A L D +GNYVVQ+++ + T ++ L+ + S +K+GSNV+
Sbjct: 212 DKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVI 271
Query: 389 ERCLLESGEEQSTRIIIELLRS---PNVSMLLMHPFGNYVIQSALLVS 433
E+ L + S +I+E+L + + LL +GNYV+Q+AL +S
Sbjct: 272 EKILKTA--IVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 317
>gi|444318131|ref|XP_004179723.1| hypothetical protein TBLA_0C04040 [Tetrapisispora blattae CBS 6284]
gi|387512764|emb|CCH60204.1| hypothetical protein TBLA_0C04040 [Tetrapisispora blattae CBS 6284]
Length = 870
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 169/295 (57%), Gaps = 12/295 (4%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+ L GNI ++ DQYGCR LQ+ + L KE ++IF E D ELM D FGNY++Q
Sbjct: 541 AELSQFIGNIYSICTDQYGCRFLQKQLDVLGKEAADIIFNETKDHTVELMTDSFGNYLIQ 600
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E + EQR I+ +++ F V I LN HG RA+ KL+E ++ ++++ +L P
Sbjct: 601 KLLERITLEQRI-IIANISSPHF--VEIALNPHGTRALQKLVECTETDEESNIIVKSLTP 657
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
+ L+KD NG++V+Q C++ + +++ + + IAT + GCCVLQ C+++
Sbjct: 658 SILMLSKDLNGNHVVQKCLQKMPPKHFQFIFDAACKDFIEIATHRHGCCVLQRCLDHGTE 717
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP----QITASLLRQLEGHYVSFSCN 381
QR L +++ N +L D +GNYVVQ+++ T ++ L+ + S +
Sbjct: 718 EQRHSLCNKLLENIDMLTMDPFGNYVVQYVITKESDDNKYDFTYKIVHLLKPKVIVLSLH 777
Query: 382 KYGSNVVERCLLESGEEQSTRIIIELLRSPN---VSMLLMHPFGNYVIQSALLVS 433
K+GSNVVE+ L S +I+ELL + + LL +GNYV+Q+AL +S
Sbjct: 778 KFGSNVVEKLLRT--PIVSETVILELLNKESNQEIQTLLNDSYGNYVLQTALAIS 830
>gi|294656065|ref|XP_458303.2| DEHA2C14278p [Debaryomyces hansenii CBS767]
gi|199430829|emb|CAG86381.2| DEHA2C14278p [Debaryomyces hansenii CBS767]
Length = 658
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 177/319 (55%), Gaps = 26/319 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTM-------SSLPKEEIEMIFVEVIDRVCELMIDPFG 200
L LR I+ LAKDQYGCR LQ+ + S + E ++IF EV + EL+IDPFG
Sbjct: 131 LDQLRPEILKLAKDQYGCRFLQKKIDENVIPSSQIRTENFKVIFKEVYPFIYELIIDPFG 190
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVL 260
NY+VQKL++ C + + IL +L + L +I +N HG RA+ K++ +L N Q+SL++
Sbjct: 191 NYLVQKLIDYCDDANLSLILEIL---QYNLFQISINQHGTRALQKIINSLNNDYQLSLLI 247
Query: 261 AALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCV 320
+ L P + L KD NG++VIQ + +S E+ +++ + + ++ Y +AT K GCCVLQ C+
Sbjct: 248 SGLNPFIIELIKDLNGNHVIQKILNKYSPENCQFIYDSIINDLYVVATHKHGCCVLQKCL 307
Query: 321 EYSKGAQRERLVAEIIANALL--LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSF 378
+ Q + +I+ L D +GNYV+Q+L+++ I + V+
Sbjct: 308 NHVNSMQLVQFSQKILMFDTFRKLTNDQFGNYVLQYLISINSISINLKMYENFMKFGVNN 367
Query: 379 SCN-KYGSNVVERCLL-----ESGEEQSTRIIIEL---LRSPNVSMLLMHPFGNYVIQSA 429
CN K+ SNVVE+ L E + + +EL + +++ ++ PFGNYVIQ+
Sbjct: 368 LCNLKFSSNVVEKFLKNCYVNEPNSPAFSNLKLELCLQVMQGDLNKMINDPFGNYVIQTL 427
Query: 430 LLVSKVRLFSSPPISVCKP 448
+ + +P I+ P
Sbjct: 428 -----IDILVNPSINYTNP 441
>gi|330801647|ref|XP_003288836.1| hypothetical protein DICPUDRAFT_98148 [Dictyostelium purpureum]
gi|325081082|gb|EGC34611.1| hypothetical protein DICPUDRAFT_98148 [Dictyostelium purpureum]
Length = 738
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 177/312 (56%), Gaps = 7/312 (2%)
Query: 123 PRNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEE-IE 181
PR S+S+ +SL ++ G I L K Q GCR LQ+ + P E +
Sbjct: 399 PRKPMTKSVSMSAIGLNNQDPKVTSLEEITGQIYHLTKYQAGCRFLQKKLEEKPDSEHVT 458
Query: 182 MIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIR 241
+IF EV D + ELMIDP+G Y++ +L++ C QR +I+ + + + + +GI
Sbjct: 459 LIFNEVFDHLNELMIDPYGQYLIPQLMKYCDNNQRRQIVDKIAPN---VETFACHVYGIH 515
Query: 242 AVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVAD 301
+ KLL+ L+ P Q+ ++++++ + L+KD+ G+Y++Q +K FS E +++ + + +
Sbjct: 516 GIQKLLQYLS-PDQVDSIISSIKNKVIQLSKDSKGNYLVQSFLKQFSPEVNQFVCDAIMN 574
Query: 302 NCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP 361
N I T K GC V+ C++ + Q E+LV I ++L L +D +GNYVVQHLL+ +
Sbjct: 575 NIQEICTHKVGCTVVNRCIDNANPQQLEQLVDRITQHSLKLVQDQFGNYVVQHLLS-KNK 633
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
++ L++ L G+ S K+ SNV+E+CL + E II E+ + ++ LL +
Sbjct: 634 SYSSKLIKSLLGNIAELSVQKFSSNVIEKCLQVADTETYESIIKEITEA-DILNLLQDKY 692
Query: 422 GNYVIQSALLVS 433
N+VIQ+AL V+
Sbjct: 693 ANFVIQTALDVA 704
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 110/243 (45%), Gaps = 7/243 (2%)
Query: 198 PFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQIS 257
P V + L +++ + L +T + L + G R + K LE + + ++
Sbjct: 402 PMTKSVSMSAIGLNNQDPKVTSLEEITGQIYHLTKY---QAGCRFLQKKLEEKPDSEHVT 458
Query: 258 LVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQ 317
L+ + L D G Y+I +K+ + + +++++A N A G +Q
Sbjct: 459 LIFNEVFDHLNELMIDPYGQYLIPQLMKYCDNNQRRQIVDKIAPNVETFACHVYGIHGIQ 518
Query: 318 HCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVS 377
++Y Q + +++ I + L++D GNY+VQ L P++ + + +
Sbjct: 519 KLLQYLSPDQVDSIISSIKNKVIQLSKDSKGNYLVQSFLKQFSPEVNQFVCDAIMNNIQE 578
Query: 378 FSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
+K G VV RC+ + +Q +++ + + + L+ FGNYV+Q L+SK +
Sbjct: 579 ICTHKVGCTVVNRCIDNANPQQLEQLVDRITQ--HSLKLVQDQFGNYVVQH--LLSKNKS 634
Query: 438 FSS 440
+SS
Sbjct: 635 YSS 637
>gi|68467297|ref|XP_722310.1| hypothetical protein CaO19.12458 [Candida albicans SC5314]
gi|68467526|ref|XP_722196.1| hypothetical protein CaO19.4991 [Candida albicans SC5314]
gi|46444151|gb|EAL03428.1| hypothetical protein CaO19.4991 [Candida albicans SC5314]
gi|46444276|gb|EAL03552.1| hypothetical protein CaO19.12458 [Candida albicans SC5314]
Length = 938
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 172/301 (57%), Gaps = 21/301 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTM--SSLPKEEI-----EMIFVEVIDRVCELMIDPFG 200
L L+ I+ LAKDQYGCR LQ+ + S +P ++ E+IF ++ V EL++DPFG
Sbjct: 279 LTQLKSEILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFEIIFNQIYSHVYELIVDPFG 338
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVL 260
NY++QKL+ C+E ++ +L + L +I +N HG RA+ K++++L N Q+ L++
Sbjct: 339 NYLIQKLIVYCNESNLDLLMEIL---QYNLFQISINQHGTRALQKIIDSLNNSHQLGLLI 395
Query: 261 AALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCV 320
L+P + L KD NG++VIQ + + D +++ + + D+ Y +AT K GCCVLQ C+
Sbjct: 396 KGLKPYIIELIKDLNGNHVIQKILNKYEPPDCQFIYDSIIDDLYIVATHKHGCCVLQKCL 455
Query: 321 EYSKGAQRERLVAEIIA--NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSF 378
+ Q I+ N LL D +GNYV+Q+L+++ I + + +S
Sbjct: 456 NHVTLQQLGEFSRAILKFENFKLLINDQFGNYVLQYLISINSLDINFQIFQNFVNFGISN 515
Query: 379 SCN-KYGSNVVERCLLESGEEQSTRI--------IIELLRSPNVSMLLMHPFGNYVIQSA 429
CN K+ SNVVE+ L +S + +I ++ ++++L+ P+GNYVIQ+
Sbjct: 516 LCNLKFSSNVVEKFLKNCYANESVNVSFSNLKFELIYIILVSDLNVLINDPYGNYVIQTM 575
Query: 430 L 430
+
Sbjct: 576 I 576
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 103/224 (45%), Gaps = 7/224 (3%)
Query: 221 LMLTNDDFQLVRICLNTHGIRAVLKLL-ENLTNPQQISL-----VLAALRPGAVTLTKDT 274
L LT +++++ + +G R + K + E+L Q+ L + + L D
Sbjct: 277 LPLTQLKSEILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFEIIFNQIYSHVYELIVDP 336
Query: 275 NGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAE 334
G+Y+IQ + + + + L+ + N + I+ ++ G LQ ++ + + L+ +
Sbjct: 337 FGNYLIQKLIVYCNESNLDLLMEILQYNLFQISINQHGTRALQKIIDSLNNSHQLGLLIK 396
Query: 335 IIANALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLL 393
+ ++ L +D GN+V+Q +L P + + + +K+G V+++CL
Sbjct: 397 GLKPYIIELIKDLNGNHVIQKILNKYEPPDCQFIYDSIIDDLYIVATHKHGCCVLQKCLN 456
Query: 394 ESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
+Q +L+ N +L+ FGNYV+Q + ++ + +
Sbjct: 457 HVTLQQLGEFSRAILKFENFKLLINDQFGNYVLQYLISINSLDI 500
>gi|169791860|pdb|3BX2|A Chain A, Puf4 Rna Binding Domain Bound To Ho Endonuclease Rna 3'
Utr Recognition Sequence
gi|169791861|pdb|3BX2|B Chain B, Puf4 Rna Binding Domain Bound To Ho Endonuclease Rna 3'
Utr Recognition Sequence
Length = 335
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 172/288 (59%), Gaps = 12/288 (4%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G+I +L KDQ+GCR LQ+ + L + + IF E D ELM D FGNY++QKL+E +
Sbjct: 13 GSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVT 72
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
EQR +L +++ F V I LN HG RA+ KL+E + ++ +V+ +LRP V L+K
Sbjct: 73 TEQRI-VLTKISSPHF--VEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSK 129
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D NG++VIQ C++ E+ +++ + ++D+C IAT + GCCVLQ C+++ Q + L
Sbjct: 130 DLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLC 189
Query: 333 AEIIANALLLAEDCYGNYVVQHLLALRVPQ----ITASLLRQLEGHYVSFSCNKYGSNVV 388
+++A L D +GNYVVQ+++ + T ++ L+ + S +K+GSNV+
Sbjct: 190 DKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVI 249
Query: 389 ERCLLESGEEQSTRIIIELLRS---PNVSMLLMHPFGNYVIQSALLVS 433
E+ L S +I+E+L + + LL +GNYV+Q+AL +S
Sbjct: 250 EKIL--KTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 295
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
Query: 295 LLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQH 354
+L++ + + + D+ GC LQ ++ + + E + L D +GNY++Q
Sbjct: 7 VLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQK 66
Query: 355 LLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVS 414
LL + L + H+V S N +G+ +++ + ++ +I+++ LR P
Sbjct: 67 LLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLR-PYTV 125
Query: 415 MLLMHPFGNYVIQSAL 430
L GN+VIQ L
Sbjct: 126 QLSKDLNGNHVIQKCL 141
>gi|238878269|gb|EEQ41907.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 965
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 172/301 (57%), Gaps = 21/301 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTM--SSLPKEEI-----EMIFVEVIDRVCELMIDPFG 200
L L+ I+ LAKDQYGCR LQ+ + S +P ++ E+IF ++ V EL++DPFG
Sbjct: 280 LTQLKSEILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFEIIFNQIYSHVYELIVDPFG 339
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVL 260
NY++QKL+ C+E ++ +L + L +I +N HG RA+ K++++L N Q+ L++
Sbjct: 340 NYLIQKLIVYCNESNLDLLMEIL---QYNLFQISINQHGTRALQKIIDSLNNSHQLGLLI 396
Query: 261 AALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCV 320
L+P + L KD NG++VIQ + + D +++ + + D+ Y +AT K GCCVLQ C+
Sbjct: 397 KGLKPYIIELIKDLNGNHVIQKILNKYEPPDCQFIYDSIIDDLYIVATHKHGCCVLQKCL 456
Query: 321 EYSKGAQRERLVAEIIA--NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSF 378
+ Q I+ N LL D +GNYV+Q+L+++ I + + +S
Sbjct: 457 NHVTLQQLGEFSRAILKFENFKLLINDQFGNYVLQYLISINSLDINFQIFQNFVNFGISN 516
Query: 379 SCN-KYGSNVVERCLLESGEEQSTRI--------IIELLRSPNVSMLLMHPFGNYVIQSA 429
CN K+ SNVVE+ L +S + +I ++ ++++L+ P+GNYVIQ+
Sbjct: 517 LCNLKFSSNVVEKFLKNCYANESVNVSFSNLKFELIYIILVSDLNVLINDPYGNYVIQTM 576
Query: 430 L 430
+
Sbjct: 577 I 577
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 103/224 (45%), Gaps = 7/224 (3%)
Query: 221 LMLTNDDFQLVRICLNTHGIRAVLKLL-ENLTNPQQISL-----VLAALRPGAVTLTKDT 274
L LT +++++ + +G R + K + E+L Q+ L + + L D
Sbjct: 278 LPLTQLKSEILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFEIIFNQIYSHVYELIVDP 337
Query: 275 NGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAE 334
G+Y+IQ + + + + L+ + N + I+ ++ G LQ ++ + + L+ +
Sbjct: 338 FGNYLIQKLIVYCNESNLDLLMEILQYNLFQISINQHGTRALQKIIDSLNNSHQLGLLIK 397
Query: 335 IIANALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLL 393
+ ++ L +D GN+V+Q +L P + + + +K+G V+++CL
Sbjct: 398 GLKPYIIELIKDLNGNHVIQKILNKYEPPDCQFIYDSIIDDLYIVATHKHGCCVLQKCLN 457
Query: 394 ESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
+Q +L+ N +L+ FGNYV+Q + ++ + +
Sbjct: 458 HVTLQQLGEFSRAILKFENFKLLINDQFGNYVLQYLISINSLDI 501
>gi|169791859|pdb|3BWT|A Chain A, Crystal Structure Of The Rna Binding Domain Of Puf4 From
Saccharomyces Cerevisiae
Length = 333
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 172/288 (59%), Gaps = 12/288 (4%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G+I +L KDQ+GCR LQ+ + L + + IF E D ELM D FGNY++QKL+E +
Sbjct: 13 GSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVT 72
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
EQR +L +++ F V I LN HG RA+ KL+E + ++ +V+ +LRP V L+K
Sbjct: 73 TEQRI-VLTKISSPHF--VEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSK 129
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D NG++VIQ C++ E+ +++ + ++D+C IAT + GCCVLQ C+++ Q + L
Sbjct: 130 DLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLC 189
Query: 333 AEIIANALLLAEDCYGNYVVQHLLALRVPQ----ITASLLRQLEGHYVSFSCNKYGSNVV 388
+++A L D +GNYVVQ+++ + T ++ L+ + S +K+GSNV+
Sbjct: 190 DKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVI 249
Query: 389 ERCLLESGEEQSTRIIIELLRS---PNVSMLLMHPFGNYVIQSALLVS 433
E+ L S +I+E+L + + LL +GNYV+Q+AL +S
Sbjct: 250 EKIL--KTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 295
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
Query: 295 LLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQH 354
+L++ + + + D+ GC LQ ++ + + E + L D +GNY++Q
Sbjct: 7 VLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQK 66
Query: 355 LLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVS 414
LL + L + H+V S N +G+ +++ + ++ +I+++ LR P
Sbjct: 67 LLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLR-PYTV 125
Query: 415 MLLMHPFGNYVIQSAL 430
L GN+VIQ L
Sbjct: 126 QLSKDLNGNHVIQKCL 141
>gi|241950345|ref|XP_002417895.1| Protein binding to mRNAs encoding chromatin modifiers and spindle
pole body components; involved in longevity, in
maintenance of cell wall integrity, and in sensitivity
to and recovery from pheromone arrest, putative;
RNA-binding protein, putative [Candida dubliniensis
CD36]
gi|223641233|emb|CAX45613.1| Protein binding to mRNAs encoding chromatin modifiers and spindle
pole body components; involved in longevity, in
maintenance of cell wall integrity, and in sensitivity
to and recovery from pheromone arrest, putative [Candida
dubliniensis CD36]
Length = 982
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 172/301 (57%), Gaps = 21/301 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTM--SSLPKEEI-----EMIFVEVIDRVCELMIDPFG 200
L L+ I+ LAKDQYGCR LQ+ + S +P ++ E+IF ++ V EL++DPFG
Sbjct: 282 LTQLKSEILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFEVIFNQIYSYVYELIVDPFG 341
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVL 260
NY++QKL+ C+E ++ +L + L +I +N HG RA+ K++++L N Q+ L++
Sbjct: 342 NYLIQKLIVYCNESNLDLLMEIL---QYNLFQISINQHGTRALQKIIDSLNNSHQLGLLI 398
Query: 261 AALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCV 320
L+P + L KD NG++VIQ + + D +++ + + D+ Y +AT K GCCVLQ C+
Sbjct: 399 KGLKPYIIELIKDLNGNHVIQKILNKYEPPDCQFIYDSIIDDLYIVATHKHGCCVLQKCL 458
Query: 321 EYSKGAQRERLVAEIIA--NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSF 378
+ Q I+ N LL D +GNYV+Q+L+++ I + + +S
Sbjct: 459 NHVTLQQLGEFSRAILKFENFKLLINDQFGNYVLQYLISINSLDINFQIFQNFVNFGISN 518
Query: 379 SCN-KYGSNVVERCLLESGEEQSTRI--------IIELLRSPNVSMLLMHPFGNYVIQSA 429
CN K+ SNVVE+ L +S + +I ++ ++++L+ P+GNYVIQ+
Sbjct: 519 LCNLKFSSNVVEKFLKNCYANESVNVSFSNLKFELIYIILVSDLNVLINDPYGNYVIQTM 578
Query: 430 L 430
+
Sbjct: 579 I 579
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 103/224 (45%), Gaps = 7/224 (3%)
Query: 221 LMLTNDDFQLVRICLNTHGIRAVLKLL-ENLTNPQQISL-----VLAALRPGAVTLTKDT 274
L LT +++++ + +G R + K + E+L Q+ L + + L D
Sbjct: 280 LPLTQLKSEILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFEVIFNQIYSYVYELIVDP 339
Query: 275 NGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAE 334
G+Y+IQ + + + + L+ + N + I+ ++ G LQ ++ + + L+ +
Sbjct: 340 FGNYLIQKLIVYCNESNLDLLMEILQYNLFQISINQHGTRALQKIIDSLNNSHQLGLLIK 399
Query: 335 IIANALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLL 393
+ ++ L +D GN+V+Q +L P + + + +K+G V+++CL
Sbjct: 400 GLKPYIIELIKDLNGNHVIQKILNKYEPPDCQFIYDSIIDDLYIVATHKHGCCVLQKCLN 459
Query: 394 ESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
+Q +L+ N +L+ FGNYV+Q + ++ + +
Sbjct: 460 HVTLQQLGEFSRAILKFENFKLLINDQFGNYVLQYLISINSLDI 503
>gi|448516169|ref|XP_003867508.1| hypothetical protein CORT_0B03630 [Candida orthopsilosis Co 90-125]
gi|380351847|emb|CCG22071.1| hypothetical protein CORT_0B03630 [Candida orthopsilosis]
Length = 822
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 180/331 (54%), Gaps = 39/331 (11%)
Query: 141 DSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLP----------------KEEIE--- 181
+ + + + D +G+I+ L DQ+GCR LQR + KE+++
Sbjct: 464 NKYQNAKIEDYKGHILDLCGDQHGCRFLQRELIKEQEGIAKGEGNKADELDNKEKVDESL 523
Query: 182 --MIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHG 239
M+F E+ D + LM+D FGNY++QKLVE ++EQR L ++ Q RI L++HG
Sbjct: 524 ATMVFNELDDDIVNLMLDSFGNYLIQKLVECITDEQR---LELIKKSRSQFNRIALDSHG 580
Query: 240 IRAVLKLLE-------------NLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKH 286
RA+ KL+E + + L++ +L P V+L+KD NG++V+Q C+
Sbjct: 581 TRALQKLIECVGKTKDEADVKGDELQDESARLIIESLAPTIVSLSKDLNGNHVVQKCLIS 640
Query: 287 FSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDC 346
S+E + + + + DNC +A + GCCVLQ C++Y Q + L EI + D
Sbjct: 641 LSNETNQVIYDTIKDNCEVVACHRHGCCVLQRCLDYGNNQQIDALSHEITTKLDIFTADP 700
Query: 347 YGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIE 406
YGNYVVQ++L Q ++ L+ ++ S +K+GSNV+E+ L + +QS+ +I E
Sbjct: 701 YGNYVVQYVLTHGDRQSIDTIFAYLQSNFYQLSIHKFGSNVLEKSLRLNNTKQSSILIDE 760
Query: 407 LLR--SPNVSMLLMHPFGNYVIQSALLVSKV 435
LL+ S +L +GNYV+Q+ L V+++
Sbjct: 761 LLKLSSDQFLKVLNDSYGNYVLQTCLDVAQL 791
>gi|22327539|ref|NP_199125.2| pumilio 14 [Arabidopsis thaliana]
gi|75339252|sp|Q4PSD1.1|PUM14_ARATH RecName: Full=Pumilio homolog 14; Short=APUM-14; Short=AtPUM14
gi|67633854|gb|AAY78851.1| pumilio/Puf RNA-binding domain-containing protein [Arabidopsis
thaliana]
gi|332007528|gb|AED94911.1| pumilio 14 [Arabidopsis thaliana]
Length = 518
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/283 (39%), Positives = 166/283 (58%), Gaps = 9/283 (3%)
Query: 157 ALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQR 216
A AKD+ L ++ KE ++ I+ +I +CELM+DP+G+ VVQ L+ CS EQ
Sbjct: 207 AFAKDKEMSERLGMSIFQGTKETVDAIYNGLIGDICELMVDPYGSDVVQLLMRRCSSEQI 266
Query: 217 TRILLMLTNDDFQLVRICLNTHGIRAVLKLLE--NLTNPQQISLVLAALRPGAVTLTKDT 274
+++ ++T FQ V IC+++ G A+ LL N QI ++ +R A+ L+K
Sbjct: 267 VQLVDIVTQQMFQFVNICIDSLGTNAIQVLLTCINERAKDQIPRIVDVVRTVALQLSKSN 326
Query: 275 NGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ---RERL 331
+ +VI C + F + LL + NC+ IA D+ GCC+LQ C + R+RL
Sbjct: 327 HAIFVILACFRLFPLH-CRLLLELIVQNCHQIAIDQHGCCLLQLCFNKDRVPNLEIRQRL 385
Query: 332 VAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERC 391
+ E IANAL L +CYGNYVVQ+++ L + +L+RQL G+Y + NKYGS+ V++
Sbjct: 386 IMEAIANALRLCLNCYGNYVVQYIVELNNRYLIDALVRQLIGNYAHLARNKYGSHAVQK- 444
Query: 392 LLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
LL+ S I+I+LLR + LL+ PFGNYVIQ+A VSK
Sbjct: 445 LLKLRWIDSRVIVIDLLRE--IDTLLLDPFGNYVIQTAWFVSK 485
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 136 NQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELM 195
N++L D+ +R L GN LA+++YG +Q+ + L + +I ++++ + L+
Sbjct: 414 NRYLIDAL----VRQLIGNYAHLARNKYGSHAVQKLL-KLRWIDSRVIVIDLLREIDTLL 468
Query: 196 IDPFGNYVVQKLVELCSEEQR 216
+DPFGNYV+Q + ++ R
Sbjct: 469 LDPFGNYVIQTAWFVSKDDVR 489
>gi|398015064|ref|XP_003860722.1| RNA-binding regulatory protein (pumilio family), putative
[Leishmania donovani]
gi|322498944|emb|CBZ34017.1| RNA-binding regulatory protein (pumilio family), putative
[Leishmania donovani]
Length = 554
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 167/284 (58%), Gaps = 4/284 (1%)
Query: 151 LRGNIVALAKDQYGCRHLQRTM-SSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
LRG + AKDQ+GCR+LQR + ++ E ++++ E+I V ELM D + N+++QKL +
Sbjct: 198 LRGRVYETAKDQHGCRYLQRWLDTNCDTEALQVMMDEIIPHVGELMTDQYANFLIQKLFD 257
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
+ ++ R ++ ++ + I L HG +V K++E ++ +++ ++ AL V
Sbjct: 258 IMPDDVRYKVAVVAAP---HICMISLTPHGTFSVQKMIETISTREEMKIICEALAKDVVR 314
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
L KD +G++VIQ ++ F +D +Y+ VA +C IA +K GCCVLQ C+E++ Q+
Sbjct: 315 LVKDAHGNHVIQKVLQRFDFDDKEYIYRAVATDCVSIAKNKQGCCVLQRCLEHASPRQKA 374
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVE 389
LV +++A L +A+D +GNYV+Q++L +I ++ H V S NK+ SNV+E
Sbjct: 375 ALVDQVLACCLQIAQDPFGNYVLQYVLEAHDSKINDTIALAFLPHLVQLSMNKFSSNVME 434
Query: 390 RCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVS 433
+ L + + E+ +S L+ +GNYV+Q+AL ++
Sbjct: 435 KVLRGASRPVQVMYMEEMCNPEIISHLIQDDYGNYVLQTALTIN 478
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
R + + V++AK++ GC LQR + + + +V+ ++ DPFGNYV+Q ++
Sbjct: 342 RAVATDCVSIAKNKQGCCVLQRCLEHASPRQKAALVDQVLACCLQIAQDPFGNYVLQYVL 401
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
E + I L LV++ +N + K+L + P Q+ + P +
Sbjct: 402 EAHDSKINDTIALAFLP---HLVQLSMNKFSSNVMEKVLRGASRPVQVMYMEEMCNPEII 458
Query: 269 T-LTKDTNGHYVIQ 281
+ L +D G+YV+Q
Sbjct: 459 SHLIQDDYGNYVLQ 472
>gi|261331948|emb|CBH14941.1| pumillio RNA binding protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 585
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 168/290 (57%), Gaps = 9/290 (3%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEM---IFVEVIDRVCELMIDPFGNYV 203
S+ +LRGN+ LAKDQ+GCR LQR + P+ + E+ I E++ V ELM D + N++
Sbjct: 217 SVENLRGNVYELAKDQHGCRFLQRLLCD-PEADCEIPRTIMSEIVPHVAELMTDQYANFL 275
Query: 204 VQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL 263
VQKL ++ ++ R + + ++ I L HG +V K++E +++ +++ ++ AL
Sbjct: 276 VQKLFDIMPKDVRYNVACVAAP---KIAAIALTPHGTFSVQKMIETISSREELVIIREAL 332
Query: 264 RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
V L KD NG++ IQ ++ F +D +++ VA +C IA +K GCCVLQ C+EY+
Sbjct: 333 SKDVVRLVKDANGNHAIQKVLQRFEPDDKEFVYAAVAVDCITIAKNKQGCCVLQRCLEYA 392
Query: 324 KGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
AQR LV I+ L +AED YGNYV+Q++++ + ++ H V NK+
Sbjct: 393 SPAQRSTLVRHILECCLQIAEDPYGNYVLQYVISAGDSKTIDTIAIAFLPHLVQLCMNKF 452
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPNVSM-LLMHPFGNYVIQSALLV 432
SNV+E+ L + ++ + +P V+ L+ FGNYV+Q+AL +
Sbjct: 453 SSNVMEKVLCRV-SPLVQEMYVDTMCTPEVAARLIQDDFGNYVLQTALTI 501
>gi|146086139|ref|XP_001465465.1| putative pumillio protein 3 [Leishmania infantum JPCM5]
gi|134069563|emb|CAM67886.1| putative pumillio protein 3 [Leishmania infantum JPCM5]
Length = 554
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 166/284 (58%), Gaps = 4/284 (1%)
Query: 151 LRGNIVALAKDQYGCRHLQRTM-SSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
LRG + AKDQ+GCR+LQR + ++ E ++++ E+I V ELM D + N+++QKL +
Sbjct: 198 LRGRVYETAKDQHGCRYLQRWLDTNCDTEALQVMMDEIIPHVGELMTDQYANFLIQKLFD 257
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
+ ++ R ++ ++ + I L HG +V K++E ++ +++ ++ AL V
Sbjct: 258 IMPDDARYKVAVVAAP---HICMISLTPHGTFSVQKMIETISTREEMKIICEALAKDVVR 314
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
L KD +G++VIQ ++ F +D +Y+ VA +C IA +K GCCVLQ C+E++ Q+
Sbjct: 315 LVKDAHGNHVIQKVLQRFDFDDKEYIYRAVATDCVSIAKNKQGCCVLQRCLEHASPRQKA 374
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVE 389
LV +++A L + +D +GNYV+Q++L +I ++ H V S NK+ SNV+E
Sbjct: 375 ALVDQVLACCLQIVQDPFGNYVLQYVLEAHDSKINDTIALAFLPHLVQLSMNKFSSNVME 434
Query: 390 RCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVS 433
+ L + + E+ +S L+ +GNYV+Q+AL ++
Sbjct: 435 KVLRGASRPVQVMYMEEMCNPEIISHLIQDDYGNYVLQTALTIN 478
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
R + + V++AK++ GC LQR + + + +V+ +++ DPFGNYV+Q ++
Sbjct: 342 RAVATDCVSIAKNKQGCCVLQRCLEHASPRQKAALVDQVLACCLQIVQDPFGNYVLQYVL 401
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
E + I L LV++ +N + K+L + P Q+ + P +
Sbjct: 402 EAHDSKINDTIALAFLP---HLVQLSMNKFSSNVMEKVLRGASRPVQVMYMEEMCNPEII 458
Query: 269 T-LTKDTNGHYVIQ 281
+ L +D G+YV+Q
Sbjct: 459 SHLIQDDYGNYVLQ 472
>gi|367002536|ref|XP_003686002.1| hypothetical protein TPHA_0F00820 [Tetrapisispora phaffii CBS 4417]
gi|357524302|emb|CCE63568.1| hypothetical protein TPHA_0F00820 [Tetrapisispora phaffii CBS 4417]
Length = 794
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 113/346 (32%), Positives = 191/346 (55%), Gaps = 25/346 (7%)
Query: 95 NQDSSILNLLHNHNFDGLRSNGNELSSVPRNQWMSSLSLKRNQWLQDSFDCSSLRDLRGN 154
N+D + +N + N N GN++ +NQ+ + K + L ++ ++L G+
Sbjct: 428 NKDDNKVNYVRNRN-------GNQM----KNQYGGYVQRKYDDSL--IYNDATLDQFIGS 474
Query: 155 IVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEE 214
I +L KDQ+GCR LQ+ + + ++ IF E+ + ELM D FGNY++QKL+E + E
Sbjct: 475 IYSLCKDQHGCRFLQKQLDLVGEQAANTIFEEIKNHCIELMTDSFGNYLIQKLLERITLE 534
Query: 215 QRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDT 274
QR L+++ + I LN HG RA+ KL+E + ++ +++ +L+P V L+KD
Sbjct: 535 QR---LIIINISAPYFIDIALNPHGTRALQKLVECIKTDEEAKIIVDSLKPSIVELSKDL 591
Query: 275 NGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAE 334
NG++V+Q ++ F E +++ NC IAT + GCCVLQ C++ Q E L +
Sbjct: 592 NGNHVVQKILQQFKPEFIQFIFEAACQNCIEIATHRHGCCVLQRCLDSGTTTQCESLCEQ 651
Query: 335 IIANALLLAEDCYGNYVVQHLLALRVP----QITASLLRQLEGHYVSFSCNKYGSNVVER 390
++ N L+ + +GNYV+Q+++ V + + L+ S +K+GSNVVE+
Sbjct: 652 LLINIDRLSFNPFGNYVIQYVITKEVETGNYNYSYKYINILKHKIKDLSLHKFGSNVVEK 711
Query: 391 CLLESGEEQSTRIIIELLRSPN---VSMLLMHPFGNYVIQSALLVS 433
L S II+ELL+ + +LL +GNYV+Q+AL V+
Sbjct: 712 LL--RTPVLSETIILELLKKGGKNEIEILLNDSYGNYVLQTALDVT 755
>gi|71746472|ref|XP_822291.1| pumilio RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831959|gb|EAN77463.1| pumillio RNA binding protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 585
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 168/290 (57%), Gaps = 9/290 (3%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEM---IFVEVIDRVCELMIDPFGNYV 203
S+ +LRGN+ LAKDQ+GCR LQR + P+ + E+ I E++ V ELM D + N++
Sbjct: 217 SVENLRGNVYELAKDQHGCRFLQRLLCD-PEADCEIPRTIMSEIVPHVAELMTDQYANFL 275
Query: 204 VQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL 263
VQKL ++ ++ R + + ++ I L HG +V K++E +++ +++ ++ AL
Sbjct: 276 VQKLFDIMPKDVRYSVACVAAP---KIAAIALTPHGTFSVQKMIETISSREELVIIREAL 332
Query: 264 RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
V L KD NG++ IQ ++ F +D +++ VA +C IA +K GCCVLQ C+EY+
Sbjct: 333 SKDVVRLVKDANGNHAIQKVLQLFEPDDKEFVYAAVAVDCITIAKNKQGCCVLQRCLEYA 392
Query: 324 KGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
AQR LV I+ L +AED YGNYV+Q++++ + ++ H V NK+
Sbjct: 393 SPAQRSTLVRHILECCLQIAEDPYGNYVLQYVISAGDSKTIDTIAIAFLPHLVQLCMNKF 452
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPNVSM-LLMHPFGNYVIQSALLV 432
SNV+E+ L + ++ + +P V+ L+ FGNYV+Q+AL +
Sbjct: 453 SSNVMEKVLCRV-SPLVQEMYVDTMCTPEVAARLIQDDFGNYVLQTALTI 501
>gi|403362771|gb|EJY81119.1| RNA-binding protein, putative [Oxytricha trifallax]
Length = 1066
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 158/284 (55%), Gaps = 3/284 (1%)
Query: 156 VALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQ 215
LAKDQ GCR LQR + +E ++ IF I+ +LM DPFGNY+ QKL E E+Q
Sbjct: 536 TVLAKDQGGCRFLQRKIEENNREVVDKIFRHTIENFMDLMNDPFGNYLAQKLTETVREDQ 595
Query: 216 RTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTN 275
T I+ + D V +C N+HG R++ K++E + +P QI L+ L+ L +D N
Sbjct: 596 LTEIIHKVQEDP---VGLCRNSHGTRSIQKIIETVKSPAQIELLANYLKEKVQELAEDIN 652
Query: 276 GHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEI 335
G++VIQ + + +++ N + + C IA K GCCV+Q C++ + Q+ L I
Sbjct: 653 GNHVIQKILFTWKPAQNQFIYNAMMEKCVEIACHKHGCCVMQKCIDGATPQQKLELTLRI 712
Query: 336 IANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLES 395
+ + + YGNYVVQ++L L++ ++ + +L G + K+ SNV+E+CL +
Sbjct: 713 GDHTQVFVRNPYGNYVVQYVLELKMVEVNQRIGEKLLGSLLLLGMEKFSSNVIEKCLEHN 772
Query: 396 GEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFS 439
++ E+L++ + L+ +GNYVIQ +L V+ FS
Sbjct: 773 ATNVKEAMVREILQADSFYDFLLDQYGNYVIQKSLSVAVEPYFS 816
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 110/221 (49%), Gaps = 11/221 (4%)
Query: 156 VALAKDQYGCRHLQRTMSSLPK-EEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEE 214
V L ++ +G R +Q+ + ++ +IE++ + ++V EL D GN+V+QK++
Sbjct: 608 VGLCRNSHGTRSIQKIIETVKSPAQIELLANYLKEKVQELAEDINGNHVIQKILFTWKPA 667
Query: 215 QRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT--LTK 272
Q I + + V I + HG + K ++ T Q++ L L R G T +
Sbjct: 668 QNQFIYNAMME---KCVEIACHKHGCCVMQKCIDGATPQQKLELTL---RIGDHTQVFVR 721
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
+ G+YV+QY ++ E + + ++ + + +K V++ C+E++ +E +V
Sbjct: 722 NPYGNYVVQYVLELKMVEVNQRIGEKLLGSLLLLGMEKFSSNVIEKCLEHNATNVKEAMV 781
Query: 333 AEII-ANALL-LAEDCYGNYVVQHLLALRVPQITASLLRQL 371
EI+ A++ D YGNYV+Q L++ V + + +L
Sbjct: 782 REILQADSFYDFLLDQYGNYVIQKSLSVAVEPYFSQFIEKL 822
>gi|344302253|gb|EGW32558.1| hypothetical protein SPAPADRAFT_67158 [Spathaspora passalidarum
NRRL Y-27907]
Length = 926
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 176/301 (58%), Gaps = 21/301 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSS--LPKEEI-----EMIFVEVIDRVCELMIDPFG 200
L L+ I+ L+KDQYGCR LQ+ + +P ++ E+IF ++ + +L+IDPFG
Sbjct: 215 LIQLKSEILKLSKDQYGCRFLQKKIDENLIPNYQVRHANFEIIFKQIYPYMYDLIIDPFG 274
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVL 260
NY++QKL+ C+E +L +L + FQ I ++ HG RA+ K+++NL N Q+ L++
Sbjct: 275 NYLIQKLIIYCNEANLNLLLEILQENLFQ---ISISQHGTRALQKIIDNLNNSYQLELLI 331
Query: 261 AALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCV 320
L+P + L KD NG++VIQ + + +D +++ + + D+ Y +AT K GCCVLQ C+
Sbjct: 332 KGLKPYIIDLIKDLNGNHVIQKILNKYQPQDCQFIYDSIIDDLYIVATHKHGCCVLQKCL 391
Query: 321 EYSKGAQRERLVAEII--ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSF 378
+ AQ ++ A I+ N LL D +GNYV+Q+L+++ ++ + +
Sbjct: 392 NHVTPAQLQQFSAAILRFDNFKLLINDQFGNYVLQYLISINSFEMNYKIFENFVQFNIGN 451
Query: 379 SCN-KYGSNVVERCLL-----ESGEEQSTRIIIELLRS---PNVSMLLMHPFGNYVIQSA 429
CN K+ SNVVE+ L E+ + + + EL+ + +++ L+ P+GNYVIQ+
Sbjct: 452 LCNLKFSSNVVEKFLKNCFNNETMDMSFSNLKFELIYNILINDLNKLINDPYGNYVIQTL 511
Query: 430 L 430
+
Sbjct: 512 I 512
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 100/216 (46%), Gaps = 7/216 (3%)
Query: 229 QLVRICLNTHGIRAVLKLL-ENLTNPQQI-----SLVLAALRPGAVTLTKDTNGHYVIQY 282
+++++ + +G R + K + ENL Q+ ++ + P L D G+Y+IQ
Sbjct: 221 EILKLSKDQYGCRFLQKKIDENLIPNYQVRHANFEIIFKQIYPYMYDLIIDPFGNYLIQK 280
Query: 283 CVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVE-YSKGAQRERLVAEIIANALL 341
+ + + + LL + +N + I+ + G LQ ++ + Q E L+ + +
Sbjct: 281 LIIYCNEANLNLLLEILQENLFQISISQHGTRALQKIIDNLNNSYQLELLIKGLKPYIID 340
Query: 342 LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQST 401
L +D GN+V+Q +L PQ + + + +K+G V+++CL Q
Sbjct: 341 LIKDLNGNHVIQKILNKYQPQDCQFIYDSIIDDLYIVATHKHGCCVLQKCLNHVTPAQLQ 400
Query: 402 RIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
+ +LR N +L+ FGNYV+Q + ++ +
Sbjct: 401 QFSAAILRFDNFKLLINDQFGNYVLQYLISINSFEM 436
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 110/238 (46%), Gaps = 17/238 (7%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKE-EIEMIFVEVIDRVCELMIDPFGNYVVQK 206
L L+ N+ ++ Q+G R LQ+ + +L ++E++ + + +L+ D GN+V+QK
Sbjct: 294 LEILQENLFQISISQHGTRALQKIIDNLNNSYQLELLIKGLKPYIIDLIKDLNGNHVIQK 353
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
++ + I + +D L + + HG + K L ++T Q A LR
Sbjct: 354 ILNKYQPQDCQFIYDSIIDD---LYIVATHKHGCCVLQKCLNHVTPAQLQQFSAAILRFD 410
Query: 267 AVTL-TKDTNGHYVIQYCVKHFSHE-DTKYLLNEVADNCYGIATDKSGCCV----LQHC- 319
L D G+YV+QY + S E + K N V N + K V L++C
Sbjct: 411 NFKLLINDQFGNYVLQYLISINSFEMNYKIFENFVQFNIGNLCNLKFSSNVVEKFLKNCF 470
Query: 320 ----VEYSKGAQRERLVAEIIANAL-LLAEDCYGNYVVQHLLALRV-PQITASLLRQL 371
++ S + L+ I+ N L L D YGNYV+Q L+ + + P + + + +L
Sbjct: 471 NNETMDMSFSNLKFELIYNILINDLNKLINDPYGNYVIQTLIDILINPHVDNNQVEKL 528
>gi|157869162|ref|XP_001683133.1| putative pumillio protein 3 [Leishmania major strain Friedlin]
gi|68224016|emb|CAJ05068.1| putative pumillio protein 3 [Leishmania major strain Friedlin]
Length = 569
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 167/284 (58%), Gaps = 4/284 (1%)
Query: 151 LRGNIVALAKDQYGCRHLQRTM-SSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
LRG + AKDQ+GCR+LQR + ++ E ++++ E+I V ELM D + N+++QKL +
Sbjct: 198 LRGRVYETAKDQHGCRYLQRWLDTNCDPEALQVMMNEIIPHVGELMTDQYANFLIQKLFD 257
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
+ ++ R ++ ++ Q+ I L HG +V K++E ++ +++ ++ AL V
Sbjct: 258 IMPDDVRYKVAIVAAP---QICMISLTPHGTFSVQKMIETISTREEMEIISEALCKDVVR 314
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
L KD +G++VIQ ++ F +D +Y+ VA +C IA +K GCCVLQ C+E++ Q+
Sbjct: 315 LVKDAHGNHVIQKVLQRFDFDDKEYIYRAVATDCVSIAKNKQGCCVLQRCLEHASPRQKA 374
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVE 389
LV +++A L + +D +GNYV+Q++L +I ++ H V S NK+ SNV+E
Sbjct: 375 ALVDQVLACCLQIVQDPFGNYVLQYVLEEHDSKINDTIALAFLPHLVQLSMNKFSSNVME 434
Query: 390 RCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVS 433
+ L + + E+ +S L+ +GNYV+Q+AL ++
Sbjct: 435 KVLRGASGPVQVMYMEEMCNPEIISHLIQDDYGNYVLQTALTIN 478
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
R + + V++AK++ GC LQR + + + +V+ +++ DPFGNYV+Q ++
Sbjct: 342 RAVATDCVSIAKNKQGCCVLQRCLEHASPRQKAALVDQVLACCLQIVQDPFGNYVLQYVL 401
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
E + I L LV++ +N + K+L + P Q+ + P +
Sbjct: 402 EEHDSKINDTIALAFLP---HLVQLSMNKFSSNVMEKVLRGASGPVQVMYMEEMCNPEII 458
Query: 269 T-LTKDTNGHYVIQ 281
+ L +D G+YV+Q
Sbjct: 459 SHLIQDDYGNYVLQ 472
>gi|354545908|emb|CCE42637.1| hypothetical protein CPAR2_202800 [Candida parapsilosis]
Length = 986
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 174/301 (57%), Gaps = 21/301 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSS--LPKEEI-----EMIFVEVIDRVCELMIDPFG 200
L L+ I+ LAKDQYGCR LQ+ + +P ++ E+IF +V +CEL++DPFG
Sbjct: 288 LIQLKSEILKLAKDQYGCRFLQKKIDENLIPSYQVRAANFEIIFDQVYPYMCELIVDPFG 347
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVL 260
NY+VQK++ CS+ + LML + L +I +N HG RA+ K+++NL + Q++L++
Sbjct: 348 NYLVQKMIPYCSD---ANLDLMLEILQYNLCQISINQHGTRALQKIIDNLNSTSQLNLLI 404
Query: 261 AALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCV 320
L+P + L +D NG++VIQ + + + +++ + + ++ Y +AT K GCCVLQ C+
Sbjct: 405 KGLKPYIIELIRDLNGNHVIQKILNKYEPPNCQFIYDSIIEDLYTVATHKHGCCVLQKCL 464
Query: 321 EYSKGAQRERLVAEIIA--NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSF 378
+ Q + I+ N +L D +GNYV+Q+L+++ +++ + + ++
Sbjct: 465 NHVTQQQLNQFSKAILKFDNFKMLINDQFGNYVLQYLISINSIEVSCEMFQNFFQFGLTN 524
Query: 379 SCN-KYGSNVVERCLLESGEEQSTRIIIELLR--------SPNVSMLLMHPFGNYVIQSA 429
CN K+ SNVVE+ + + + L+ + ++++L+ PFGNYVIQ+
Sbjct: 525 LCNSKFSSNVVEKFMKNCYNNEVVDVAFADLKFELIYNILANDLNVLVNDPFGNYVIQTM 584
Query: 430 L 430
L
Sbjct: 585 L 585
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 101/216 (46%), Gaps = 7/216 (3%)
Query: 229 QLVRICLNTHGIRAVLKLL-ENLTNPQQI-----SLVLAALRPGAVTLTKDTNGHYVIQY 282
+++++ + +G R + K + ENL Q+ ++ + P L D G+Y++Q
Sbjct: 294 EILKLAKDQYGCRFLQKKIDENLIPSYQVRAANFEIIFDQVYPYMCELIVDPFGNYLVQK 353
Query: 283 CVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVE-YSKGAQRERLVAEIIANALL 341
+ + S + +L + N I+ ++ G LQ ++ + +Q L+ + +
Sbjct: 354 MIPYCSDANLDLMLEILQYNLCQISINQHGTRALQKIIDNLNSTSQLNLLIKGLKPYIIE 413
Query: 342 LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQST 401
L D GN+V+Q +L P + + + + +K+G V+++CL ++Q
Sbjct: 414 LIRDLNGNHVIQKILNKYEPPNCQFIYDSIIEDLYTVATHKHGCCVLQKCLNHVTQQQLN 473
Query: 402 RIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
+ +L+ N ML+ FGNYV+Q + ++ + +
Sbjct: 474 QFSKAILKFDNFKMLINDQFGNYVLQYLISINSIEV 509
>gi|357443885|ref|XP_003592220.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355481268|gb|AES62471.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 416
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 167/291 (57%), Gaps = 5/291 (1%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+R ++++A D GC++LQ + ++E I V D V +LM NY+++K+ +
Sbjct: 90 MRELVLSMAMDWRGCQYLQAKIEKGNPADVEFILSIVKDHVHQLMTHN-NNYLIKKIFQA 148
Query: 211 ---CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLT-NPQQISLVLAALRPG 266
+ EQ I+L + +DD +L +C++ G R + +L+N+ + ++V+ +
Sbjct: 149 RSGVTPEQMESIVLSIISDDQKLKHVCMDNRGTRVMQNMLKNIKLSFTTYNVVVCTMHRI 208
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ L K NG YVI C+K F E + +L++VA NC I TDK GC ++Q C+ +G+
Sbjct: 209 TLALVKSFNGGYVILQCLKFFQSEHKRVILDQVARNCVDITTDKIGCSIIQKCLSLVEGS 268
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ LV EII+NA++LAED YGNYV+Q ++ + +++QL G + FS +K+ SN
Sbjct: 269 VKSLLVTEIISNAMILAEDPYGNYVLQFVITMESSATREKMIKQLRGKFARFSMSKHSSN 328
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
VVE L S E I+ E+++S + ++ PFGNYV Q AL +K RL
Sbjct: 329 VVEDLLRFSNENDVAVIVEEIMKSCDFLNVVQDPFGNYVAQRALKCTKGRL 379
>gi|254585741|ref|XP_002498438.1| ZYRO0G10274p [Zygosaccharomyces rouxii]
gi|238941332|emb|CAR29505.1| ZYRO0G10274p [Zygosaccharomyces rouxii]
Length = 900
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/295 (35%), Positives = 169/295 (57%), Gaps = 12/295 (4%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
++L GNI +L KDQ+GCR LQ + L E + I+ E D ELM D FGNY++Q
Sbjct: 572 ATLDQFIGNIYSLCKDQHGCRFLQMQLDVLGPEAADAIYDETRDYTVELMTDSFGNYLIQ 631
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E + +QR + + VRI N HG RA+ KL+E ++ ++ +V+ +L+
Sbjct: 632 KLLEKVTVDQRIFLARIAAP---HFVRIASNPHGTRALQKLVECVSTEEEAQIVINSLKG 688
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
V L+KD NG++++Q C++ +D +++ + +C IAT + GCCVLQ C+++
Sbjct: 689 SIVELSKDLNGNHIVQKCLQKLQPKDVQFIFDAACQHCTEIATHRHGCCVLQRCLDHGSK 748
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ----ITASLLRQLEGHYVSFSCN 381
AQ + L ++ + L D +GNYVVQ+++ V Q T ++ L+ V S +
Sbjct: 749 AQCQALCNILLKHVDHLTLDPFGNYVVQYIITKEVEQDSYDYTYKVVHLLKPKVVELSLH 808
Query: 382 KYGSNVVERCLLESGEEQSTRIIIELLRS---PNVSMLLMHPFGNYVIQSALLVS 433
K+GSNV+E+ + S +I+E+L + +V LL +GNYV+Q+AL VS
Sbjct: 809 KFGSNVIEKIIRT--RVVSETMIMEILNNRGDTDVPALLNDGYGNYVLQTALDVS 861
>gi|169791866|pdb|3BX3|A Chain A, Puf4 T650cC724R MUTANT BOUND TO COX17 RNA 3' UTR
Recognition Sequence
gi|169791867|pdb|3BX3|B Chain B, Puf4 T650cC724R MUTANT BOUND TO COX17 RNA 3' UTR
Recognition Sequence
Length = 335
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 171/288 (59%), Gaps = 12/288 (4%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G+I +L KDQ+GCR LQ+ + L + + IF E D ELM D FGNY++QKL+E +
Sbjct: 13 GSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVT 72
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
EQR +L +++ F V I LN HG RA+ KL+E + ++ +V+ +LRP V L+K
Sbjct: 73 TEQRI-VLTKISSPHF--VEISLNPHGCRALQKLIECIKTDEEAQIVVDSLRPYTVQLSK 129
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D NG++VIQ C++ E+ +++ + ++D+C IAT + GC VLQ C+++ Q + L
Sbjct: 130 DLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCRVLQRCLDHGTTEQCDNLC 189
Query: 333 AEIIANALLLAEDCYGNYVVQHLLALRVPQ----ITASLLRQLEGHYVSFSCNKYGSNVV 388
+++A L D +GNYVVQ+++ + T ++ L+ + S +K+GSNV+
Sbjct: 190 DKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVI 249
Query: 389 ERCLLESGEEQSTRIIIELLRS---PNVSMLLMHPFGNYVIQSALLVS 433
E+ L S +I+E+L + + LL +GNYV+Q+AL +S
Sbjct: 250 EKIL--KTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDIS 295
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 1/136 (0%)
Query: 295 LLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQH 354
+L++ + + + D+ GC LQ ++ + + E + L D +GNY++Q
Sbjct: 7 VLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQK 66
Query: 355 LLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVS 414
LL + L + H+V S N +G +++ + ++ +I+++ LR P
Sbjct: 67 LLEEVTTEQRIVLTKISSPHFVEISLNPHGCRALQKLIECIKTDEEAQIVVDSLR-PYTV 125
Query: 415 MLLMHPFGNYVIQSAL 430
L GN+VIQ L
Sbjct: 126 QLSKDLNGNHVIQKCL 141
>gi|448526042|ref|XP_003869269.1| Mpt5 RNA-binding protein [Candida orthopsilosis Co 90-125]
gi|380353622|emb|CCG23133.1| Mpt5 RNA-binding protein [Candida orthopsilosis]
Length = 972
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 170/301 (56%), Gaps = 21/301 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMS-------SLPKEEIEMIFVEVIDRVCELMIDPFG 200
L L+ I+ LAKDQYGCR LQ+ + + E+IF ++ +CEL++DPFG
Sbjct: 287 LTQLKPEILKLAKDQYGCRFLQKKIDENLISNYQVRATNFEVIFDQIYPYMCELIVDPFG 346
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVL 260
NY+VQK+ CSE IL +L + L +I +N HG RA+ K+++NL + Q++L++
Sbjct: 347 NYLVQKMTPYCSEGNLNLILEIL---QYNLCQISVNQHGTRALQKIIDNLNSTSQLNLLI 403
Query: 261 AALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCV 320
L+P + L +D NG++VIQ + + + +++ + + ++ Y +AT K GCCVLQ C+
Sbjct: 404 KGLKPYIIDLIRDLNGNHVIQKILNKYDPPECQFIYDSIIEDLYTVATHKHGCCVLQKCL 463
Query: 321 EYSKGAQRERLVAEIIA--NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSF 378
+ Q ++ I+ N +L D +GNYV+Q+L+++ + + + ++
Sbjct: 464 NHVTPQQLDQFSKAILKFDNFRMLINDQFGNYVLQYLISINSVDVNYKMFQNFLQSGLTN 523
Query: 379 SCN-KYGSNVVERCLLESGEEQSTRIIIELLR--------SPNVSMLLMHPFGNYVIQSA 429
CN K+ SNVVE+ + ++ + L+ + ++++L+ P+GNYVIQ+
Sbjct: 524 LCNSKFSSNVVEKFMKNCFNNETVDVAFANLKFELIYNILTGDLNVLVNDPYGNYVIQTM 583
Query: 430 L 430
L
Sbjct: 584 L 584
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 100/216 (46%), Gaps = 7/216 (3%)
Query: 229 QLVRICLNTHGIRAVLKLL-ENLTNPQQI-----SLVLAALRPGAVTLTKDTNGHYVIQY 282
+++++ + +G R + K + ENL + Q+ ++ + P L D G+Y++Q
Sbjct: 293 EILKLAKDQYGCRFLQKKIDENLISNYQVRATNFEVIFDQIYPYMCELIVDPFGNYLVQK 352
Query: 283 CVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVE-YSKGAQRERLVAEIIANALL 341
+ S + +L + N I+ ++ G LQ ++ + +Q L+ + +
Sbjct: 353 MTPYCSEGNLNLILEILQYNLCQISVNQHGTRALQKIIDNLNSTSQLNLLIKGLKPYIID 412
Query: 342 LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQST 401
L D GN+V+Q +L P + + + + +K+G V+++CL +Q
Sbjct: 413 LIRDLNGNHVIQKILNKYDPPECQFIYDSIIEDLYTVATHKHGCCVLQKCLNHVTPQQLD 472
Query: 402 RIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
+ +L+ N ML+ FGNYV+Q + ++ V +
Sbjct: 473 QFSKAILKFDNFRMLINDQFGNYVLQYLISINSVDV 508
>gi|255728835|ref|XP_002549343.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240133659|gb|EER33215.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 970
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 168/303 (55%), Gaps = 25/303 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTM--SSLPKEEI-----EMIFVEVIDRVCELMIDPFG 200
L L+ I+ LAKDQYGCR LQ+ + S +P ++ ++IF + + EL+IDPFG
Sbjct: 295 LIQLKSEILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFDIIFNQTYQYMYELIIDPFG 354
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVL 260
NY++QKL+ C+E ++ +L + L +I +N HG RA+ K+++NL N Q+ L++
Sbjct: 355 NYLIQKLIAYCNESNLDLLMEIL---QYNLFQISINQHGTRALQKIIDNLNNSHQLGLLI 411
Query: 261 AALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCV 320
L+P + L KD NG++VIQ + + D +++ + + D+ Y +AT K GCCVLQ C+
Sbjct: 412 KGLKPYIIELIKDLNGNHVIQKILNKYQPPDCQFIYDSIIDDLYIVATHKHGCCVLQKCL 471
Query: 321 EYSKGAQRERLVAEIIA--NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSF 378
+ Q I+ N LL D +GNYV+Q+L+++ I + + +S
Sbjct: 472 NHVTLQQLGEFSRAILKFENFKLLINDQFGNYVLQYLISINSLDINFKIFQNFITFGISN 531
Query: 379 SCN-KYGSNVVERCLLESGEEQSTR----------IIIELLRSPNVSMLLMHPFGNYVIQ 427
CN K+ SNVVE+ L ++ I I L+ NV L+ P+GNYVIQ
Sbjct: 532 LCNLKFSSNVVEKFLKNCYTNETVNSSFANLKFELIYIILINDLNV--LINDPYGNYVIQ 589
Query: 428 SAL 430
+ +
Sbjct: 590 TMI 592
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVE-YSKGAQR 328
L D G+Y+IQ + + + + L+ + N + I+ ++ G LQ ++ + Q
Sbjct: 348 LIIDPFGNYLIQKLIAYCNESNLDLLMEILQYNLFQISINQHGTRALQKIIDNLNNSHQL 407
Query: 329 ERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
L+ + + L +D GN+V+Q +L P + + + +K+G V+
Sbjct: 408 GLLIKGLKPYIIELIKDLNGNHVIQKILNKYQPPDCQFIYDSIIDDLYIVATHKHGCCVL 467
Query: 389 ERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
++CL +Q +L+ N +L+ FGNYV+Q + ++ + +
Sbjct: 468 QKCLNHVTLQQLGEFSRAILKFENFKLLINDQFGNYVLQYLISINSLDI 516
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 41/74 (55%)
Query: 142 SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGN 201
+F S+L +L+ + + K C + SS + E+I++ +I+ + L+ DP+GN
Sbjct: 526 TFGISNLCNLKFSSNVVEKFLKNCYTNETVNSSFANLKFELIYIILINDLNVLINDPYGN 585
Query: 202 YVVQKLVELCSEEQ 215
YV+Q ++++ Q
Sbjct: 586 YVIQTMIDIIVNPQ 599
>gi|357489397|ref|XP_003614986.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355516321|gb|AES97944.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 349
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 97/262 (37%), Positives = 154/262 (58%), Gaps = 1/262 (0%)
Query: 179 EIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH 238
+I+ +F EVI V + +DPF + +VQ ++E ++QR +I+ LT QLV L+++
Sbjct: 17 DIDTMFNEVIGDVVKQTLDPFMSNIVQHVLEFGRDDQRLKIVRKLTQHPDQLVEASLDSY 76
Query: 239 GIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNE 298
G + V KL+ + ++I+LV +L G + L D +G+ V+Q C+ +S ED +++ +
Sbjct: 77 GTKCVQKLISTHNSKKEIALVSYSLLSGFLYLVMDLDGNQVLQRCLSCWSVEDNEFIYDA 136
Query: 299 VADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLAL 358
CY +ATD+ GCC+LQ C+E+S G +++LV EI A LA+ YGN++VQ+++ +
Sbjct: 137 ATRFCYAVATDEHGCCLLQRCIEFSNGNSQQKLVKEICKYAFHLAQHEYGNHIVQYIIQM 196
Query: 359 RVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLM 418
+ P A L Q G YV S K+ +VVE+C LE E RI+ E L P LL
Sbjct: 197 QNPSAIAELTAQFNGKYVQLSMQKFSIHVVEKC-LEHIVETRARIVQEFLAVPYFENLLQ 255
Query: 419 HPFGNYVIQSALLVSKVRLFSS 440
P+ NYV+Q AL ++ L S
Sbjct: 256 DPYANYVVQCALKFTEGSLHES 277
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 98/225 (43%), Gaps = 8/225 (3%)
Query: 155 IVALAKDQYGCRHLQRTMSSL-PKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSE 213
+V + D YG + +Q+ +S+ K+EI ++ ++ L++D GN V+Q+ + S
Sbjct: 68 LVEASLDSYGTKCVQKLISTHNSKKEIALVSYSLLSGFLYLVMDLDGNQVLQRCLSCWSV 127
Query: 214 EQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKD 273
E I T + + + HG + + +E Q LV + A L +
Sbjct: 128 EDNEFIYDAATRFCY---AVATDEHGCCLLQRCIEFSNGNSQQKLV-KEICKYAFHLAQH 183
Query: 274 TNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVA 333
G++++QY ++ + L + ++ K V++ C+E+ R R+V
Sbjct: 184 EYGNHIVQYIIQMQNPSAIAELTAQFNGKYVQLSMQKFSIHVVEKCLEHIVET-RARIVQ 242
Query: 334 EIIANALL--LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYV 376
E +A L +D Y NYVVQ L + SL+ + H +
Sbjct: 243 EFLAVPYFENLLQDPYANYVVQCALKFTEGSLHESLVETVRSHKI 287
>gi|300123315|emb|CBK24588.2| unnamed protein product [Blastocystis hominis]
Length = 497
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 165/299 (55%), Gaps = 11/299 (3%)
Query: 134 KRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE 193
K W + D RG+I ++ D GCR LQ + + ++ I +I+ EV D + E
Sbjct: 158 KSAMWQSNDID-----SYRGHIKEMSHDHNGCRALQSCLDNASQKMIPIIYEEVGDSLTE 212
Query: 194 LMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNP 253
LM+D FGNY+ QKL+++ S EQR +L + + ++V + HG R+V KL++ + +
Sbjct: 213 LMMDSFGNYLFQKLLDVSSVEQRREVLRKVKH---KIVAASFDVHGTRSVQKLIQ-ICHG 268
Query: 254 QQISL--VLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKS 311
Q+ L ++ ALR L+ D+NG++VIQ C+ H E Y+ EV +C I+ +
Sbjct: 269 QEDMLKDIMDALRGNIAKLSSDSNGNHVIQRCLNHMPEEYKVYVYEEVVKSCVNISMQRH 328
Query: 312 GCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQL 371
GCCV+Q C++++ ++ I+ +A+ L D +GNYV+Q+L+ + R +
Sbjct: 329 GCCVVQRCLDFAPEKYHNMMLDAIVNSAVELICDPFGNYVIQYLIEKGKESEKERIARCV 388
Query: 372 EGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
G V+ SC KY SNV+E+ LL + E ++ EL P + +L + NYVIQ AL
Sbjct: 389 LGKVVALSCQKYSSNVIEKILLFAPESVRNEVVAELAECPKLRDVLHDIYANYVIQQAL 447
>gi|323304919|gb|EGA58676.1| Puf4p [Saccharomyces cerevisiae FostersB]
Length = 705
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 93/247 (37%), Positives = 151/247 (61%), Gaps = 7/247 (2%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G+I +L KDQ+GCR LQ+ + L + + IF E D ELM D FGNY++QKL+E +
Sbjct: 450 GSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVT 509
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
EQR +L +++ F V I LN HG RA+ KL+E + ++ +V+ +LRP V L+K
Sbjct: 510 TEQRI-VLTKISSPHF--VEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSK 566
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D NG++VIQ C++ E+ +++ + ++D+C IAT + GCCVLQ C+++ Q + L
Sbjct: 567 DLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLC 626
Query: 333 AEIIANALLLAEDCYGNYVVQHLLALRVPQ----ITASLLRQLEGHYVSFSCNKYGSNVV 388
+++A L D +GNYVVQ+++ + T ++ L+ + S +K+GSNV+
Sbjct: 627 DKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVI 686
Query: 389 ERCLLES 395
E+ L +S
Sbjct: 687 EKNLEDS 693
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 4/196 (2%)
Query: 233 ICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDT 292
+C + HG R + K L+ L + + + + V L D+ G+Y+IQ ++ + E
Sbjct: 455 LCKDQHGCRFLQKQLDILGS-KAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQR 513
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEII-ANALLLAEDCYGNYV 351
L + + I+ + G LQ +E K + ++V + + + L++D GN+V
Sbjct: 514 IVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSKDLNGNHV 573
Query: 352 VQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSP 411
+Q L P+ + + + + +++G V++RCL EQ + +LL
Sbjct: 574 IQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDKLLAL- 632
Query: 412 NVSMLLMHPFGNYVIQ 427
V L + PFGNYV+Q
Sbjct: 633 -VDKLTLDPFGNYVVQ 647
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
Query: 295 LLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQH 354
+L++ + + + D+ GC LQ ++ + + E + L D +GNY++Q
Sbjct: 444 VLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQK 503
Query: 355 LLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVS 414
LL + L + H+V S N +G+ +++ + ++ +I+++ LR P
Sbjct: 504 LLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLR-PYTV 562
Query: 415 MLLMHPFGNYVIQSAL 430
L GN+VIQ L
Sbjct: 563 QLSKDLNGNHVIQKCL 578
>gi|401421895|ref|XP_003875436.1| RNA-binding regulatory protein (pumilio family),putative
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322491673|emb|CBZ26946.1| RNA-binding regulatory protein (pumilio family),putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 568
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 165/284 (58%), Gaps = 4/284 (1%)
Query: 151 LRGNIVALAKDQYGCRHLQRTM-SSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
LRG + AKDQ+GCR+LQR + ++ E ++++ E+I V ELM D + N+++QKL +
Sbjct: 198 LRGRVYETAKDQHGCRYLQRWLDTNCDPETLQVMMDEIIPHVGELMTDQYANFLIQKLFD 257
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
+ ++ R ++ ++ Q+ I L HG +V K++E ++ ++ ++ AL V
Sbjct: 258 IMPDDVRYKVAIVAAP---QICMISLTPHGTFSVQKMIETISTREETEIICEALAKDVVR 314
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
L KD +G++VIQ ++ F +D +Y+ V+ +C IA +K GCCVLQ +E++ Q+
Sbjct: 315 LVKDAHGNHVIQKVLQRFDFDDKEYIYRAVSTDCVSIAKNKQGCCVLQRSLEHASPRQKA 374
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVE 389
LV +++A L + +D +GNYV+Q++L +I ++ H V S NK+ SNV+E
Sbjct: 375 ALVDQVLACCLQIVQDPFGNYVLQYVLEAHDSKINDTIAFAFLPHLVHLSMNKFSSNVME 434
Query: 390 RCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVS 433
+ L + + E+ +S L+ +GNYV+Q+AL ++
Sbjct: 435 KVLRGASRPVQVMYMEEMCNPGIISHLIQDDYGNYVLQTALTIN 478
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
R + + V++AK++ GC LQR++ + + +V+ +++ DPFGNYV+Q ++
Sbjct: 342 RAVSTDCVSIAKNKQGCCVLQRSLEHASPRQKAALVDQVLACCLQIVQDPFGNYVLQYVL 401
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
E + I LV + +N + K+L + P Q+ + PG +
Sbjct: 402 EAHDSKINDTIAFAFLP---HLVHLSMNKFSSNVMEKVLRGASRPVQVMYMEEMCNPGII 458
Query: 269 T-LTKDTNGHYVIQYCVKHFSHEDTKYLLNEV 299
+ L +D G+YV+Q + + + L+N +
Sbjct: 459 SHLIQDDYGNYVLQTALTINAPAQAEQLVNAI 490
>gi|149239210|ref|XP_001525481.1| hypothetical protein LELG_03409 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450974|gb|EDK45230.1| hypothetical protein LELG_03409 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1163
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 167/299 (55%), Gaps = 21/299 (7%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMS-------SLPKEEIEMIFVEVIDRVCELMIDPFG 200
L L+ I+ LAKDQYGCR LQ+ + +IF E+ + EL+IDPFG
Sbjct: 355 LNQLKPQILKLAKDQYGCRFLQKKIDENLILNYQARLNNFTIIFDEIHSHMYELIIDPFG 414
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVL 260
NY+VQK++ C++ IL L F L +I +N HG RA+ K++++L+ Q+++++
Sbjct: 415 NYLVQKMIAYCNQSNLDMILDTL---QFNLFKISVNQHGTRALQKIIDSLSTSAQLNVLI 471
Query: 261 AALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCV 320
L+P + L KD NG++VIQ + + D +++ + + ++ Y +AT K GCCVLQ C+
Sbjct: 472 RGLKPHIIDLIKDLNGNHVIQKILNKYEPADCQFIYDSIIEDLYIVATHKHGCCVLQKCL 531
Query: 321 EYSKGAQRERLVAEIIA--NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSF 378
+ AQ + I+ N +L D +GNYV+Q+L+++ +++ +L+ + +
Sbjct: 532 NHVTPAQLNQFSLAILQYDNFKVLINDQFGNYVLQYLISINSLEVSFQVLQNFHQYGIMN 591
Query: 379 SCN-KYGSNVVERCLLESGEEQSTRIIIELLRS--------PNVSMLLMHPFGNYVIQS 428
CN K+ SNVVE+ L +S + L+ +++ L+ PFGNYVIQ+
Sbjct: 592 LCNSKFSSNVVEKYLKNCYNNESVNVAFANLKFDLIYRILIDDLNTLINDPFGNYVIQT 650
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 107/220 (48%), Gaps = 15/220 (6%)
Query: 229 QLVRICLNTHGIRAVLKLL-ENLTNPQQ-----ISLVLAALRPGAVTLTKDTNGHYVIQY 282
Q++++ + +G R + K + ENL Q +++ + L D G+Y++Q
Sbjct: 361 QILKLAKDQYGCRFLQKKIDENLILNYQARLNNFTIIFDEIHSHMYELIIDPFGNYLVQK 420
Query: 283 CVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVE-YSKGAQRERLVAEIIANALL 341
+ + + + +L+ + N + I+ ++ G LQ ++ S AQ L+ + + +
Sbjct: 421 MIAYCNQSNLDMILDTLQFNLFKISVNQHGTRALQKIIDSLSTSAQLNVLIRGLKPHIID 480
Query: 342 LAEDCYGNYVVQHLLALRVPQ----ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGE 397
L +D GN+V+Q +L P I S++ L Y+ + +K+G V+++CL
Sbjct: 481 LIKDLNGNHVIQKILNKYEPADCQFIYDSIIEDL---YI-VATHKHGCCVLQKCLNHVTP 536
Query: 398 EQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
Q + + +L+ N +L+ FGNYV+Q + ++ + +
Sbjct: 537 AQLNQFSLAILQYDNFKVLINDQFGNYVLQYLISINSLEV 576
>gi|342183779|emb|CCC93258.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 556
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 163/285 (57%), Gaps = 7/285 (2%)
Query: 151 LRGNIVALAKDQYGCRHLQRTM-SSLPKEEI-EMIFVEVIDRVCELMIDPFGNYVVQKLV 208
LRG + AKDQ+GCR+LQR + S P ++I I E++ V ELM D + N++VQKL
Sbjct: 193 LRGKVYEAAKDQHGCRYLQRLLCDSDPDKDIPRTIMSEIVPHVDELMTDQYANFLVQKLF 252
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
++ + R ++ + ++ I L HG +V K++E +++ +++ ++ AL V
Sbjct: 253 DIMPADVRLKVATVAAP---KIAAIALKPHGTFSVQKMIETISSQEELVIIREALSKDVV 309
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L KD NG++ IQ ++ F H D +++ VA +C IA +K GCCVLQ C+E++ +QR
Sbjct: 310 RLVKDANGNHAIQKVLQRFGHADKEFIYAAVAADCVTIAKNKQGCCVLQRCLEHASPSQR 369
Query: 329 ERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
LV I+ L +AED YGNYV+Q++++ ++ H V NK+ SNV+
Sbjct: 370 STLVRHILGCCLEIAEDPYGNYVLQYVISTGDNNTIDTIAIAFLPHLVQLCINKFSSNVM 429
Query: 389 ERCLLESGEEQSTRIIIELLRSPNVSM-LLMHPFGNYVIQSALLV 432
E+ +L + + + SP V+ L+ FGNYV+Q+AL +
Sbjct: 430 EK-VLGRVSLPVQEMYVNKMCSPEVAARLIQDDFGNYVLQTALTI 473
>gi|308198245|ref|XP_001387179.2| protein necessary for high temperature growth [Scheffersomyces
stipitis CBS 6054]
gi|149389106|gb|EAZ63156.2| protein necessary for high temperature growth [Scheffersomyces
stipitis CBS 6054]
Length = 528
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 176/305 (57%), Gaps = 25/305 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSS--LPKEE-----IEMIFVEVIDRVCELMIDPFG 200
L L+ +I+ L+KDQYGCR LQ+ + +P + E+IF ++ + EL+IDPFG
Sbjct: 129 LVQLKSDILRLSKDQYGCRFLQKKIDENLIPNYQTRLNNFEVIFAQIHPYLYELIIDPFG 188
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVL 260
NY++QKL+ C+E IL +L + L +I +N HG RA+ K+++NL N Q++L++
Sbjct: 189 NYLIQKLIVYCNESNLNLILQIL---QYNLFQISINQHGTRALQKIIDNLNNQYQLNLLI 245
Query: 261 AALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCV 320
++P + L KD NG++VIQ + + D +++ + + + Y +A+ K GCCVLQ C+
Sbjct: 246 KGMKPYIIELIKDLNGNHVIQKILNKYPPSDCQFIYDSIIEGLYVVASHKHGCCVLQKCL 305
Query: 321 EYSKGAQRERLVAEII--ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSF 378
+ Q + A I+ AN LL D +GNYV+Q+L+++ +I + + ++
Sbjct: 306 NHVTMTQLQEFSACILDFANFQLLINDQFGNYVLQYLISINSFEINYKIFQNFLQFGINN 365
Query: 379 SCN-KYGSNVVERCLLESGEEQS---------TRIIIELLRS---PNVSMLLMHPFGNYV 425
CN K+ SNVVE+ L ++ + + +EL+ + +++ L+ P+GNYV
Sbjct: 366 LCNLKFSSNVVEKFLKNCYNNEAYNGVTAVNFSNLKMELIYNILINDLNKLINDPYGNYV 425
Query: 426 IQSAL 430
IQ+ +
Sbjct: 426 IQTLI 430
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 9/216 (4%)
Query: 230 LVRICLNTHGIRAVLKLL-ENL-----TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYC 283
++R+ + +G R + K + ENL T ++ A + P L D G+Y+IQ
Sbjct: 136 ILRLSKDQYGCRFLQKKIDENLIPNYQTRLNNFEVIFAQIHPYLYELIIDPFGNYLIQKL 195
Query: 284 VKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVE-YSKGAQRERLVAEIIANALLL 342
+ + + + +L + N + I+ ++ G LQ ++ + Q L+ + + L
Sbjct: 196 IVYCNESNLNLILQILQYNLFQISINQHGTRALQKIIDNLNNQYQLNLLIKGMKPYIIEL 255
Query: 343 AEDCYGNYVVQHLLALRVPQITASLLRQL-EGHYVSFSCNKYGSNVVERCLLESGEEQST 401
+D GN+V+Q +L P + + EG YV + +K+G V+++CL Q
Sbjct: 256 IKDLNGNHVIQKILNKYPPSDCQFIYDSIIEGLYV-VASHKHGCCVLQKCLNHVTMTQLQ 314
Query: 402 RIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
+L N +L+ FGNYV+Q + ++ +
Sbjct: 315 EFSACILDFANFQLLINDQFGNYVLQYLISINSFEI 350
>gi|241952587|ref|XP_002419015.1| mRNA-binding protein, putative [Candida dubliniensis CD36]
gi|223642355|emb|CAX42597.1| mRNA-binding protein, putative [Candida dubliniensis CD36]
Length = 789
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 184/329 (55%), Gaps = 38/329 (11%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
+ + L+D G+I+ L KDQ+GCR LQR + + + +IF E+ +V ELMIDPFGNY
Sbjct: 437 YSDAKLQDFTGSILTLCKDQHGCRFLQRELFN--ETNATLIFNEIYFKVVELMIDPFGNY 494
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
++QKL + + EQR L+++ +L RI L+ HG R++ KL++ + N ++I ++
Sbjct: 495 LIQKLFTMINLEQR---LVLINQSSNELFRIALDPHGTRSLQKLIDVIENNEEIEIITRN 551
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFS-----------------HED---TKYLLNEVADN 302
L V L++D NG++V+Q + F+ HE+ +++ + + N
Sbjct: 552 LYSNIVVLSRDLNGNHVVQKILTKFNTISHNANSSHSSKDETNHENQNQNQFIFDIIQAN 611
Query: 303 CYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLAL---- 358
IA + GCCVLQ C++Y Q ++L EI + + L+ D YGNYVVQ++L
Sbjct: 612 LLYIACHRHGCCVLQRCLDYGNKQQCQQLSQEIAKHTIKLSLDPYGNYVVQYVLNKYSVS 671
Query: 359 --------RVPQITASLLRQLEGHYVSFSCNKYGSNVVERCL-LESGEEQSTRIIIELLR 409
Q+ +++++++ +++ S +K+GSNV+E+CL + S +IEL
Sbjct: 672 QTKIIDDEEDKQVMDNIIQEIKSNFIQLSLHKFGSNVIEKCLKITSISNDLIDNLIELDH 731
Query: 410 SPNVSMLLMHPFGNYVIQSALLVSKVRLF 438
+ LL PFGNYV+Q++L V+ + F
Sbjct: 732 GQAFNQLLNDPFGNYVLQTSLDVANLEQF 760
>gi|348675055|gb|EGZ14873.1| hypothetical protein PHYSODRAFT_545979 [Phytophthora sojae]
Length = 906
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 173/322 (53%), Gaps = 39/322 (12%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEI-EMIFVEVIDRVCELMIDPFGNYVVQ 205
S+ D++ + A++KDQ GCR LQ + + ++ E+I+ E ++ + E+M+DPFGNY+ Q
Sbjct: 448 SVEDIQNRVFAMSKDQNGCRLLQEQLDYEDRADLCEVIYQESLEHLAEMMVDPFGNYLFQ 507
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLEN-LTNPQQI-------- 256
KL+E +E+QR I+ ++++ LV LN HG R+V K++E T+P I
Sbjct: 508 KLLERVNEKQRLVIIRRVSSN---LVAAALNLHGTRSVQKVVEVCATSPDVIEEDYDDDD 564
Query: 257 --------------------------SLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHE 290
+++ AL+ AV L D+NG++VIQ ++ E
Sbjct: 565 GDEYGYVNDREERPEGGERRRTTSLPDIIVEALKDDAVRLCIDSNGNHVIQRALQFMKPE 624
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+++ + V C + T + GCCVLQ C++ + AQ+ ++ ++ A+ L +D YGNY
Sbjct: 625 YNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKAQKAEVIEQVERQAMKLMQDPYGNY 684
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
VVQ++L + ++ + GH S K+ SNV+E+CL ++ E + I E+
Sbjct: 685 VVQYVLDSCTAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSC 744
Query: 411 PNVSMLLMHPFGNYVIQSALLV 432
P ++ +L F NYV+Q AL V
Sbjct: 745 PKMNKMLQDQFANYVVQRALCV 766
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 73/179 (40%), Gaps = 36/179 (20%)
Query: 162 QYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILL 221
++GC LQR + + K + + +V + +LM DP+GNYVVQ +++ C+ E+ +++
Sbjct: 644 RHGCCVLQRCLDAANKAQKAEVIEQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVIM 703
Query: 222 MLTNDDFQL---------VRICLNTHGIRAVLKLLENLTN-------------------- 252
++L + CL R K + +T+
Sbjct: 704 KPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQDQFANYVVQRA 763
Query: 253 -----PQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTK--YLLNEVADNCY 304
+Q L++ A+RP + + G + +K F + D ++ ADN +
Sbjct: 764 LCVCAEEQCLLLVKAIRPHLAAMKNTSGGRRITARILKRFPNMDISMDMGMSPTADNLF 822
>gi|281202123|gb|EFA76328.1| hypothetical protein PPL_10093 [Polysphondylium pallidum PN500]
Length = 833
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 174/327 (53%), Gaps = 16/327 (4%)
Query: 111 GLRSNGNELSSVPRNQWMSSLSLKRNQWLQDS---FDCSSLRDLRGNIVALAKDQYGCRH 167
GL S N+ PR S+S+ + DS +SL ++ G I L K Q GCR
Sbjct: 291 GLVSTDNQ----PRKPMTKSVSM--SSIGPDSPLPMKITSLEEITGQIYHLTKYQAGCRF 344
Query: 168 LQRTMSSLPK-EEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTND 226
LQ+ + P E + +IF EV + + ELM+DP+G Y++ +L++ C QR I+ +
Sbjct: 345 LQKKLEEKPDAEHVTLIFKEVYEHLIELMVDPYGQYLIPQLMKYCDNNQRKMIVDRIAPK 404
Query: 227 DFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKH 286
HGI+ VL+ L +P+Q+ ++A++ ++L+KD G+Y+IQ +K
Sbjct: 405 VETFACHIYGIHGIQKVLQFL----SPEQVDTIIASISDKVISLSKDAKGNYLIQSFLKT 460
Query: 287 FSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDC 346
FS E +++ + + N I T K GC V+ ++ + Q E+L+ I +AL L +D
Sbjct: 461 FSPETNQFICDAIMKNVIEICTHKVGCTVVNRAIDCANKVQLEKLIDSITNHALQLVQDQ 520
Query: 347 YGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIE 406
+GNYVVQHLL T L++ + G+ S K+ SNV+E+CL + E I+ E
Sbjct: 521 FGNYVVQHLLTNNKAYAT-KLIKSVIGNIAELSVQKFSSNVIEKCLQVANTETYESIVKE 579
Query: 407 LLRSPNVSMLLMHPFGNYVIQSALLVS 433
L ++ LL + N+VIQ+AL V+
Sbjct: 580 LTEV-DILTLLQDKYANFVIQTALDVA 605
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 2/197 (1%)
Query: 239 GIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNE 298
G R + K LE + + ++L+ + + L D G Y+I +K+ + K +++
Sbjct: 341 GCRFLQKKLEEKPDAEHVTLIFKEVYEHLIELMVDPYGQYLIPQLMKYCDNNQRKMIVDR 400
Query: 299 VADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLAL 358
+A A G +Q +++ Q + ++A I + L++D GNY++Q L
Sbjct: 401 IAPKVETFACHIYGIHGIQKVLQFLSPEQVDTIIASISDKVISLSKDAKGNYLIQSFLKT 460
Query: 359 RVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLM 418
P+ + + + + +K G VV R + + + Q ++I + + L+
Sbjct: 461 FSPETNQFICDAIMKNVIEICTHKVGCTVVNRAIDCANKVQLEKLIDSITN--HALQLVQ 518
Query: 419 HPFGNYVIQSALLVSKV 435
FGNYV+Q L +K
Sbjct: 519 DQFGNYVVQHLLTNNKA 535
>gi|301099064|ref|XP_002898624.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105049|gb|EEY63101.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 907
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 169/319 (52%), Gaps = 36/319 (11%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEI-EMIFVEVIDRVCELMIDPFGNYVVQ 205
S+ D++ + A++KDQ GCR LQ + + ++ ++I+ E ++ + E+M+DPFGNY+ Q
Sbjct: 459 SVDDIQNRVFAMSKDQNGCRLLQEQLDYEDRGDLCDVIYQESLEHLAEMMVDPFGNYLFQ 518
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQI--------- 256
KL+E E+QR I+ ++++ LV LN HG R+V K++E +
Sbjct: 519 KLLERVKEKQRLVIIRRVSSN---LVAAALNLHGTRSVQKVVEVCATSSSVIEEDFDEEE 575
Query: 257 -----------------------SLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTK 293
L++ AL+ AV L D+NG++VIQ ++ E +
Sbjct: 576 EGEEYGYEERPEGGKGRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQ 635
Query: 294 YLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQ 353
++ + V C + T + GCCVLQ C++ + Q+ ++A++ A+ L +D YGNYVVQ
Sbjct: 636 FVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIAQVERQAMKLMQDPYGNYVVQ 695
Query: 354 HLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNV 413
++L + ++ + GH S K+ SNV+E+CL ++ E + I E+ P +
Sbjct: 696 YVLDSCTAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKM 755
Query: 414 SMLLMHPFGNYVIQSALLV 432
+ +L F NYV+Q AL V
Sbjct: 756 NKMLQDQFANYVVQRALCV 774
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 123/277 (44%), Gaps = 19/277 (6%)
Query: 170 RTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQ 229
R +SLP ++I + D L ID GN+V+Q+ ++ E + + +
Sbjct: 592 RRTTSLP----DLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKE--- 644
Query: 230 LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSH 289
+ + HG VL+ + N Q + V+A + A+ L +D G+YV+QY + +
Sbjct: 645 CTTVGTHRHGC-CVLQRCLDAANKTQKAEVIAQVERQAMKLMQDPYGNYVVQYVLDSCTA 703
Query: 290 EDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA----NALLLAED 345
E+ ++ + + Y ++ K V++ C+E + R++ +AEI + N +L +D
Sbjct: 704 EEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKML--QD 761
Query: 346 CYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIII 405
+ NYVVQ L + + L++ + H + G + R L + I +
Sbjct: 762 QFANYVVQRALCVCAEEQCLLLVKAIRPHLAAMKNTSGGRRITARILKRF---PNMDISM 818
Query: 406 ELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSSPP 442
++ SP L + GN ++ S L S + PP
Sbjct: 819 DMGLSPTADNLFDN--GNAMMMSHLPTSAMGGNYMPP 853
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 79/201 (39%), Gaps = 40/201 (19%)
Query: 162 QYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILL 221
++GC LQR + + K + + +V + +LM DP+GNYVVQ +++ C+ E+ +++
Sbjct: 652 RHGCCVLQRCLDAANKTQKAEVIAQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVIM 711
Query: 222 MLTNDDFQL---------VRICLNTHGIRAVLKLLENLTN-------------------- 252
++L + CL R K + +T+
Sbjct: 712 KPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQDQFANYVVQRA 771
Query: 253 -----PQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTK--YLLNEVADNCYG 305
+Q L++ A+RP + + G + +K F + D L+ ADN +
Sbjct: 772 LCVCAEEQCLLLVKAIRPHLAAMKNTSGGRRITARILKRFPNMDISMDMGLSPTADNLF- 830
Query: 306 IATDKSGCCVLQHCVEYSKGA 326
D ++ H + G
Sbjct: 831 ---DNGNAMMMSHLPTSAMGG 848
>gi|344234445|gb|EGV66315.1| ARM repeat-containing protein [Candida tenuis ATCC 10573]
Length = 746
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 173/307 (56%), Gaps = 27/307 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMS-------SLPKEEIEMIFVEVIDRVCELMIDPFG 200
L L+ +I+ L+KDQYGCR LQ+ + S+ E+IF E+ + EL+IDPFG
Sbjct: 132 LSQLKSDILRLSKDQYGCRFLQKKIDENLISNYSIRYANFEIIFNEIYLNLYELIIDPFG 191
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVL 260
NY++QKL++ S E +L +L ++ FQ I +N HG RA+ K++E+L +P Q+ L+
Sbjct: 192 NYLIQKLIKYASNENLNLMLDILQSNLFQ---ISINQHGTRALQKIIESLNSPYQLDLLT 248
Query: 261 AALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCV 320
+ L+P + L KD NG++VIQ + F +++ + + ++ +AT K GCCVLQ C+
Sbjct: 249 SGLKPFIIELIKDLNGNHVIQKILNKFKPLQCQFIYDSILNDLITVATHKHGCCVLQKCL 308
Query: 321 EYSKGAQRERLVAEIIANALL--LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSF 378
+ Q + V EI+ + L L D +GNYV+Q+L+++ QI L +
Sbjct: 309 NHVTYKQLNQFVNEILNDFNLNKLINDQFGNYVLQYLISINDYQIHYKFYSNLVRFDMIH 368
Query: 379 SCN-KYGSNVVERCLLE--SGEEQSTRIIIELLR------------SPNVSMLLMHPFGN 423
CN K+ SNV+E+ + + E ++ + I+ + S +++ L+ PFGN
Sbjct: 369 YCNLKFSSNVIEKFIKNCANNEFKNNEVNIDFVNLKFEMVHHILKTSASLNKLINDPFGN 428
Query: 424 YVIQSAL 430
YVIQ+ +
Sbjct: 429 YVIQTLI 435
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 128/272 (47%), Gaps = 11/272 (4%)
Query: 177 KEEIEMIFVEVIDRVCELMIDPFGNY----VVQKLVELCSEEQRTRILLMLTNDDFQLVR 232
+ ++ + V ++ + E + P N+ V+ E+ E + L+ ++R
Sbjct: 82 QHQLSINSVTSVNSIIEPITPPSNNHSNNVVITAGAEIDKEYLAAVSKIPLSQLKSDILR 141
Query: 233 ICLNTHGIRAVLKLL-ENLTNPQQI-----SLVLAALRPGAVTLTKDTNGHYVIQYCVKH 286
+ + +G R + K + ENL + I ++ + L D G+Y+IQ +K+
Sbjct: 142 LSKDQYGCRFLQKKIDENLISNYSIRYANFEIIFNEIYLNLYELIIDPFGNYLIQKLIKY 201
Query: 287 FSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVE-YSKGAQRERLVAEIIANALLLAED 345
S+E+ +L+ + N + I+ ++ G LQ +E + Q + L + + + L +D
Sbjct: 202 ASNENLNLMLDILQSNLFQISINQHGTRALQKIIESLNSPYQLDLLTSGLKPFIIELIKD 261
Query: 346 CYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIII 405
GN+V+Q +L P + + ++ + +K+G V+++CL +Q + +
Sbjct: 262 LNGNHVIQKILNKFKPLQCQFIYDSILNDLITVATHKHGCCVLQKCLNHVTYKQLNQFVN 321
Query: 406 ELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
E+L N++ L+ FGNYV+Q + ++ ++
Sbjct: 322 EILNDFNLNKLINDQFGNYVLQYLISINDYQI 353
>gi|71395516|ref|XP_802323.1| pumilio/PUF RNA binding protein 3 [Trypanosoma cruzi strain CL
Brener]
gi|70861784|gb|EAN80877.1| pumilio/PUF RNA binding protein 3, putative [Trypanosoma cruzi]
Length = 449
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 148/244 (60%), Gaps = 5/244 (2%)
Query: 151 LRGNIVALAKDQYGCRHLQRTM--SSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
LRG++ +AKDQ+GCR LQR + S+ E + +I EV+ V ELMID + N+++QKL
Sbjct: 196 LRGSVYEIAKDQHGCRFLQRLLGGSNGDGEFVRIIMNEVVPHVAELMIDQYANFLIQKLF 255
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
++ ++ R ++ + +++ I L HG +V K++E + + +++ ++ AL V
Sbjct: 256 DMMPQDVRYKVACVAAP---KIISIALTPHGTFSVQKMVETIASREEMDILREALSKDVV 312
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L KD +G++VIQ ++ FSH D +++ V +C IA +K GCCVLQ C+EY+ +QR
Sbjct: 313 RLVKDAHGNHVIQKVLQRFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRCLEYASCSQR 372
Query: 329 ERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
LV +I+ L +AED +GNYV+Q++L + T ++ H V NK+ SNV+
Sbjct: 373 ATLVNQILRCCLQIAEDPFGNYVLQYVLESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVI 432
Query: 389 ERCL 392
E+ L
Sbjct: 433 EKVL 436
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 6/201 (2%)
Query: 233 ICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHED 291
I + HG R + +LL + + +++ + P L D +++IQ +D
Sbjct: 203 IAKDQHGCRFLQRLLGGSNGDGEFVRIIMNEVVPHVAELMIDQYANFLIQKLFDMMP-QD 261
Query: 292 TKYLLNEVA-DNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALL-LAEDCYGN 349
+Y + VA IA G +Q VE + ++ E ++ ++ L +D +GN
Sbjct: 262 VRYKVACVAAPKIISIALTPHGTFSVQKMVETIASREEMDILREALSKDVVRLVKDAHGN 321
Query: 350 YVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLR 409
+V+Q +L + + +S + NK G V++RCL + Q ++ ++LR
Sbjct: 322 HVIQKVLQRFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRCLEYASCSQRATLVNQILR 381
Query: 410 SPNVSMLLMHPFGNYVIQSAL 430
+ PFGNYV+Q L
Sbjct: 382 C--CLQIAEDPFGNYVLQYVL 400
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 156 VALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQ 215
+++AK++ GC LQR + + + +++ ++ DPFGNYV+Q ++E +
Sbjct: 348 ISIAKNKQGCCVLQRCLEYASCSQRATLVNQILRCCLQIAEDPFGNYVLQYVLESNDSKT 407
Query: 216 RTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ 255
I + LV++C+N + K+L + P Q
Sbjct: 408 TDTIAIAFLP---HLVQLCMNKFSSNVIEKVLRGASQPVQ 444
>gi|344234446|gb|EGV66316.1| hypothetical protein CANTEDRAFT_118702 [Candida tenuis ATCC 10573]
Length = 453
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 173/307 (56%), Gaps = 27/307 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMS-------SLPKEEIEMIFVEVIDRVCELMIDPFG 200
L L+ +I+ L+KDQYGCR LQ+ + S+ E+IF E+ + EL+IDPFG
Sbjct: 87 LSQLKSDILRLSKDQYGCRFLQKKIDENLISNYSIRYANFEIIFNEIYLNLYELIIDPFG 146
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVL 260
NY++QKL++ S E +L +L ++ FQ I +N HG RA+ K++E+L +P Q+ L+
Sbjct: 147 NYLIQKLIKYASNENLNLMLDILQSNLFQ---ISINQHGTRALQKIIESLNSPYQLDLLT 203
Query: 261 AALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCV 320
+ L+P + L KD NG++VIQ + F +++ + + ++ +AT K GCCVLQ C+
Sbjct: 204 SGLKPFIIELIKDLNGNHVIQKILNKFKPLQCQFIYDSILNDLITVATHKHGCCVLQKCL 263
Query: 321 EYSKGAQRERLVAEIIANALL--LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSF 378
+ Q + V EI+ + L L D +GNYV+Q+L+++ QI L +
Sbjct: 264 NHVTYKQLNQFVNEILNDFNLNKLINDQFGNYVLQYLISINDYQIHYKFYSNLVRFDMIH 323
Query: 379 SCN-KYGSNVVERCLLE--SGEEQSTRIIIELLR------------SPNVSMLLMHPFGN 423
CN K+ SNV+E+ + + E ++ + I+ + S +++ L+ PFGN
Sbjct: 324 YCNLKFSSNVIEKFIKNCANNEFKNNEVNIDFVNLKFEMVHHILKTSASLNKLINDPFGN 383
Query: 424 YVIQSAL 430
YVIQ+ +
Sbjct: 384 YVIQTLI 390
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 107/215 (49%), Gaps = 7/215 (3%)
Query: 230 LVRICLNTHGIRAVLKLL-ENLTNPQQI-----SLVLAALRPGAVTLTKDTNGHYVIQYC 283
++R+ + +G R + K + ENL + I ++ + L D G+Y+IQ
Sbjct: 94 ILRLSKDQYGCRFLQKKIDENLISNYSIRYANFEIIFNEIYLNLYELIIDPFGNYLIQKL 153
Query: 284 VKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVE-YSKGAQRERLVAEIIANALLL 342
+K+ S+E+ +L+ + N + I+ ++ G LQ +E + Q + L + + + L
Sbjct: 154 IKYASNENLNLMLDILQSNLFQISINQHGTRALQKIIESLNSPYQLDLLTSGLKPFIIEL 213
Query: 343 AEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTR 402
+D GN+V+Q +L P + + ++ + +K+G V+++CL +Q +
Sbjct: 214 IKDLNGNHVIQKILNKFKPLQCQFIYDSILNDLITVATHKHGCCVLQKCLNHVTYKQLNQ 273
Query: 403 IIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
+ E+L N++ L+ FGNYV+Q + ++ ++
Sbjct: 274 FVNEILNDFNLNKLINDQFGNYVLQYLISINDYQI 308
>gi|260949221|ref|XP_002618907.1| hypothetical protein CLUG_00066 [Clavispora lusitaniae ATCC 42720]
gi|238846479|gb|EEQ35943.1| hypothetical protein CLUG_00066 [Clavispora lusitaniae ATCC 42720]
Length = 752
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 178/322 (55%), Gaps = 25/322 (7%)
Query: 142 SFDCSSLRDLRGNIVALAKDQYGCRHLQRTM-------SSLPKEEIEMIFVEVIDRVCEL 194
S + + L L+ I LAKDQ+GCR LQ+ + S + E+IF +V + EL
Sbjct: 123 SINKTPLSQLKDQIFRLAKDQHGCRFLQKRIDENVVSNSQTREANFEVIFEQVHPILYEL 182
Query: 195 MIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQ 254
+IDPFGNY++QKL++ C E T + L+L F L I +N HG RA+ K+++ +++
Sbjct: 183 IIDPFGNYLIQKLIDYCDE---TNLNLILETLQFNLFSISINQHGTRALQKVIDRMSSDY 239
Query: 255 QISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCC 314
Q+SL++ L+P + L KD NG++VIQ + +S E+ +++ + + + +AT K GCC
Sbjct: 240 QLSLLIKGLKPYIIELIKDLNGNHVIQKILNKYSPENCQFIYDSIIQDLLVVATHKHGCC 299
Query: 315 VLQHCVEYSKGAQRERLVAEIIANALL--LAEDCYGNYVVQHLLALRVPQITASLLRQLE 372
VLQ C+ + +Q + I+ + L D +GNYV+Q+L+++ I L
Sbjct: 300 VLQKCLNHVNPSQLMQFSTNILKYNVFMKLVNDQFGNYVLQYLISIDSIDINGQLYSNFV 359
Query: 373 GHYVSFSC-NKYGSNVVERCL-------LESGEEQSTRI-IIELLRSPNVSMLLMHPFGN 423
VS C +K+ SNVVE+ + +S E + + ++ + S +++ L+ P+GN
Sbjct: 360 RFGVSDLCKSKFSSNVVEKLMRNCFNNEFKSVEFSNLKFSLVSQILSSDLNKLINDPYGN 419
Query: 424 YVIQSALLV----SKVRLFSSP 441
YVIQ+ + S LF SP
Sbjct: 420 YVIQTLIDTLINPSITYLFDSP 441
>gi|190345122|gb|EDK36946.2| hypothetical protein PGUG_01044 [Meyerozyma guilliermondii ATCC
6260]
Length = 618
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 187/357 (52%), Gaps = 26/357 (7%)
Query: 105 HNHNFDGLRSNGNELSSVPRNQWMSSLS--LKRNQWLQDSFDCSSLRDLRGNIVALAKDQ 162
+N NF +NG S+ + SLS K ++ S + L LR I++LAKDQ
Sbjct: 60 YNKNFG---TNGLATSATGSTGFSPSLSHPTKIDKEYLLSINKVPLTQLRPQILSLAKDQ 116
Query: 163 YGCRHLQRTM-------SSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQ 215
YGCR LQ+ + + + ++IF +V + EL+IDPFGNY+VQKL+ CSE+
Sbjct: 117 YGCRFLQKKIDEHVVSNAQQRRANFDVIFSQVSPNMYELIIDPFGNYLVQKLIAYCSEQN 176
Query: 216 RTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTN 275
T IL L+ + L +I +N HG RA+ K+++ ++N Q++L++ L P + L KD N
Sbjct: 177 ITLILESLS---YNLFQISINQHGTRALQKIIDAVSNKYQLTLIVNGLSPYIIELIKDLN 233
Query: 276 GHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEI 335
G++VIQ + + +D +++ + + + +AT K GCCVLQ C+ + Q + A I
Sbjct: 234 GNHVIQKILNKYPADDCQFIYDSIIKDLLVVATHKHGCCVLQKCLNHVTTEQLSQFSARI 293
Query: 336 IANALL--LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN-KYGSNVVERCL 392
+ + L D +GNYV+Q+L+++ I ++ VS C K+ SNVVE+ L
Sbjct: 294 LTFEIFIKLINDQFGNYVLQYLISINSLPINRAVFNNFVRFGVSNLCKLKFSSNVVEKFL 353
Query: 393 LESGEEQSTRIIIELLRS--------PNVSMLLMHPFGNYVIQSALLVSKVRLFSSP 441
+ L+ +++ ++ P+GNYV+Q+ + V F P
Sbjct: 354 KNCFNNEPISDAFSCLKYDLCYQILISDLNKMINDPYGNYVVQTLIEVIVNANFKEP 410
>gi|406607197|emb|CCH41458.1| hypothetical protein BN7_999 [Wickerhamomyces ciferrii]
Length = 893
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 181/335 (54%), Gaps = 22/335 (6%)
Query: 113 RSNGNELSSVPRNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTM 172
RSNGN P+N S L+ ++ ++ L+D+ G+ V +KDQ+G R +Q+ +
Sbjct: 521 RSNGN--GKGPKNHIYRSPLLE--EFRNNTSKEYRLKDIFGSAVEFSKDQHGSRFIQQQL 576
Query: 173 SSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVR 232
EE E+IF E+ + ELM D FGNYV+QK E S+ QR +L + N Q+
Sbjct: 577 EISSDEENEVIFNEIREASLELMTDVFGNYVIQKYFEHGSDTQRQVLLEQMKN---QVQH 633
Query: 233 ICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDT 292
+ + +G R V K +E + QIS++ L+ V+ KD NG++VIQ ++ E
Sbjct: 634 LSMQMYGCRVVQKAIEYVPLNDQISII-TELKDSIVSCIKDQNGNHVIQKSIEKIPIEKI 692
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
+++L+ + Y ++T GC V+Q +E+SK +E ++ E+ L +D +GNYV+
Sbjct: 693 EFILDSLKTQIYHLSTHTYGCRVIQRLLEFSKPKDQEYILNELNKFTYFLIQDQFGNYVI 752
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---- 408
QH++ P ++ + G V FS +K+ SNVVE+C++ +EQ + I+ E+L
Sbjct: 753 QHIIEHGKPSERKLIVDTVLGSVVDFSKHKFASNVVEKCVIFGDDEQRSLILDEVLKNNE 812
Query: 409 ---------RSPNVSMLLMHPFGNYVIQSALLVSK 434
RSP + +++ F NYV+Q + V+K
Sbjct: 813 KDDDKPVDDRSP-LGLMMKDQFANYVVQKLVDVTK 846
>gi|146423478|ref|XP_001487667.1| hypothetical protein PGUG_01044 [Meyerozyma guilliermondii ATCC
6260]
Length = 618
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 168/312 (53%), Gaps = 21/312 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTM-------SSLPKEEIEMIFVEVIDRVCELMIDPFG 200
L LR I++LAKDQYGCR LQ+ + + + ++IF +V + EL+IDPFG
Sbjct: 102 LTQLRPQILSLAKDQYGCRFLQKKIDEHVVSNAQQRRANFDVIFSQVSPNMYELIIDPFG 161
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVL 260
NY+VQKL+ CSE+ T IL L + L +I +N HG RA+ K+++ ++N Q++L++
Sbjct: 162 NYLVQKLIAYCSEQNITLILESLL---YNLFQISINQHGTRALQKIIDAVSNKYQLTLIV 218
Query: 261 AALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCV 320
L P + L KD NG++VIQ + + +D +++ + + + +AT K GCCVLQ C+
Sbjct: 219 NGLSPYIIELIKDLNGNHVIQKILNKYPADDCQFIYDSIIKDLLVVATHKHGCCVLQKCL 278
Query: 321 EYSKGAQRERLVAEIIANALL--LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSF 378
+ Q + A I+ + L D +GNYV+Q+L+++ I ++ VS
Sbjct: 279 NHVTTEQLSQFSARILTFEIFIKLINDQFGNYVLQYLISINSLPINRAVFNNFVRFGVSN 338
Query: 379 SCN-KYGSNVVERCLLESGEEQSTRIIIELLRS--------PNVSMLLMHPFGNYVIQSA 429
C K+ SNVVE+ L + L+ +++ ++ P+GNYV+Q+
Sbjct: 339 LCKLKFSSNVVEKFLKNCFNNEPISDAFSCLKYDLCYQILISDLNKMINDPYGNYVVQTL 398
Query: 430 LLVSKVRLFSSP 441
+ V F P
Sbjct: 399 IEVIVNANFKEP 410
>gi|68476217|ref|XP_717758.1| hypothetical protein CaO19.5381 [Candida albicans SC5314]
gi|46439485|gb|EAK98802.1| hypothetical protein CaO19.5381 [Candida albicans SC5314]
Length = 783
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 190/344 (55%), Gaps = 35/344 (10%)
Query: 125 NQWMSSLSLKRNQWLQDS--FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEM 182
N M ++ K + +DS + + L+D G+I+ L KDQ+GCR LQR + + + +
Sbjct: 416 NNGMMNVHRKNLRRKEDSAKYSDAKLQDFTGSILTLCKDQHGCRFLQREL--INETNATL 473
Query: 183 IFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRA 242
IF E+ + ELMIDPFGNY++QKL + + EQR ++ +N+ L RI L+ HG R+
Sbjct: 474 IFNEIYFKAVELMIDPFGNYLIQKLFTMINLEQRLVLINQCSNE---LFRIALDPHGTRS 530
Query: 243 VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFS-------------- 288
+ KL++ + ++I ++ L V L++D NG++V+Q + F+
Sbjct: 531 LQKLIDVIETNEEIEIITRNLYSNIVVLSRDLNGNHVVQKILTKFNTISSDSNSSDSNRD 590
Query: 289 ---HED-TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAE 344
H++ +++ + + N IA + GCCVLQ C++Y Q ++L EI + + L+
Sbjct: 591 GAQHQNQNQFIFDIIQANLLYIACHRHGCCVLQRCLDYGNKQQCQQLSQEIAKHTIKLSL 650
Query: 345 DCYGNYVVQHLLALRV---------PQITASLLRQLEGHYVSFSCNKYGSNVVERCL-LE 394
D YGNYVVQ++L Q+ ++++++ +++ S +K+GSNV+E+CL +
Sbjct: 651 DPYGNYVVQYVLNKYSVGGDAQNTDNQVIDIIIQEIKSNFIQLSLHKFGSNVIEKCLKIS 710
Query: 395 SGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLF 438
S + +I L + LL PFGNYV+Q++L V+ + F
Sbjct: 711 SISKDLIDNLIVLDHGQAFNQLLNDPFGNYVLQTSLDVANLEQF 754
>gi|384502000|gb|EIE92491.1| hypothetical protein RO3G_17013 [Rhizopus delemar RA 99-880]
Length = 259
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 143/231 (61%), Gaps = 5/231 (2%)
Query: 196 IDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ 255
IDPFGNY QKL++ C++EQRTRI+ + + L + LN HG RAV +L+E ++ P+Q
Sbjct: 5 IDPFGNYFCQKLLDKCTDEQRTRIVHITSP---HLAQAALNIHGTRAVQRLIETISTPEQ 61
Query: 256 ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHED-TKYLLNEVADNCYGIATDKSGCC 314
I V+ AL P L K+ NG++VIQ C+ + S E+ +++ + + NC +A+ K GCC
Sbjct: 62 IDSVIHALNPSVTALIKNLNGNHVIQKCLHYLSKEEKNQFIYDAICTNCVEVASHKHGCC 121
Query: 315 VLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGH 374
VLQ C +Y+ Q+++LV EI +AL+L + +GNYVVQ++L L + + ++ ++ GH
Sbjct: 122 VLQRCFDYATFKQKDQLVKEISKHALVLVQGPFGNYVVQYVLDLGLVTYSENINQKFLGH 181
Query: 375 YVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
S S K+ SNV+E+ L+ ++ + E +R P ++ + P G +
Sbjct: 182 ICSLSSQKFSSNVIEKTSLDYADDDQREQLSECIR-PFLTAIRYTPHGKRI 231
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 134 KRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE 193
++NQ++ D+ C+ N V +A ++GC LQR ++ + + E+
Sbjct: 97 EKNQFIYDAI-CT-------NCVEVASHKHGCCVLQRCFDYATFKQKDQLVKEISKHALV 148
Query: 194 LMIDPFGNYVVQKLVEL 210
L+ PFGNYVVQ +++L
Sbjct: 149 LVQGPFGNYVVQYVLDL 165
>gi|238880509|gb|EEQ44147.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 783
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 181/324 (55%), Gaps = 33/324 (10%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
+ + L+D G+I+ L KDQ+GCR LQR + + + +IF E+ + ELMIDPFGNY
Sbjct: 436 YSDAKLQDFTGSILTLCKDQHGCRFLQREL--INETNATLIFNEIYFKAVELMIDPFGNY 493
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
++QKL + + EQR ++ +N+ L RI L+ HG R++ KL++ + ++I ++
Sbjct: 494 LIQKLFTMINLEQRLVLINQCSNE---LFRIALDPHGTRSLQKLIDVIETNEEIEIITRN 550
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFS-----------------HED-TKYLLNEVADNCY 304
L V L++D NG++V+Q + F+ H++ +++ + + N
Sbjct: 551 LYSNIVVLSRDLNGNHVVQKILTKFNTISSDSNSSDSNRDGAQHQNQNQFIFDIIQANLL 610
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRV---- 360
IA + GCCVLQ C++Y Q ++L EI + + L+ D YGNYVVQ++L
Sbjct: 611 YIACHRHGCCVLQRCLDYGNKQQCQQLSQEIAKHTIKLSLDPYGNYVVQYVLNKYSVGGD 670
Query: 361 -----PQITASLLRQLEGHYVSFSCNKYGSNVVERCL-LESGEEQSTRIIIELLRSPNVS 414
Q+ ++++++ +++ S +K+GSNV+E+CL + S + +I L +
Sbjct: 671 AQNTDNQVIDIIIQEIKSNFIQLSLHKFGSNVIEKCLKISSISKDLIDNLIVLDHGQAFN 730
Query: 415 MLLMHPFGNYVIQSALLVSKVRLF 438
LL PFGNYV+Q++L V+ + F
Sbjct: 731 QLLNDPFGNYVLQTSLDVANLEQF 754
>gi|68476406|ref|XP_717664.1| hypothetical protein CaO19.12836 [Candida albicans SC5314]
gi|46439384|gb|EAK98702.1| hypothetical protein CaO19.12836 [Candida albicans SC5314]
Length = 783
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 190/344 (55%), Gaps = 35/344 (10%)
Query: 125 NQWMSSLSLKRNQWLQDS--FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEM 182
N M ++ K + +DS + + L+D G+I+ L KDQ+GCR LQR + + + +
Sbjct: 416 NNGMMNVHRKNLRRKEDSAKYSDAKLQDFTGSILTLCKDQHGCRFLQREL--INETNATL 473
Query: 183 IFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRA 242
IF E+ + ELMIDPFGNY++QKL + + EQR ++ +N+ L RI L+ HG R+
Sbjct: 474 IFNEIYFKAVELMIDPFGNYLIQKLFTMINLEQRLVLINQCSNE---LFRIALDPHGTRS 530
Query: 243 VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFS-------------- 288
+ KL++ + ++I ++ L V L++D NG++V+Q + F+
Sbjct: 531 LQKLIDVIETNEEIEIITRNLYSNIVVLSRDLNGNHVVQKILTKFNTISSDSNSSDSNRD 590
Query: 289 ---HED-TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAE 344
H++ +++ + + N IA + GCCVLQ C++Y Q ++L EI + + L+
Sbjct: 591 GVQHQNQNQFIFDIIQANLLYIACHRHGCCVLQRCLDYGNKQQCQQLSQEIAKHTIKLSL 650
Query: 345 DCYGNYVVQHLLALRV---------PQITASLLRQLEGHYVSFSCNKYGSNVVERCL-LE 394
D YGNYVVQ++L Q+ ++++++ +++ S +K+GSNV+E+CL +
Sbjct: 651 DPYGNYVVQYVLNKYSVGGDAQNTDNQVIDIIIQEIKSNFIQLSLHKFGSNVIEKCLKIS 710
Query: 395 SGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLF 438
S + +I L + LL PFGNYV+Q++L V+ + F
Sbjct: 711 SISKDLIDNLIVLDHGQAFNQLLNDPFGNYVLQTSLDVANLEQF 754
>gi|224113073|ref|XP_002316382.1| predicted protein [Populus trichocarpa]
gi|222865422|gb|EEF02553.1| predicted protein [Populus trichocarpa]
Length = 998
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 159/286 (55%), Gaps = 9/286 (3%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
D+ G +V + DQYG R +Q+ + + EE IF E+I LM D FGNYV+QK ++
Sbjct: 670 DIAGQVVEFSTDQYGSRFIQQKLETASVEEKNKIFPEIIPHARTLMTDVFGNYVIQKFLD 729
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
+E QR ++ LT + ++ + L +G R + K LE + +Q +V+ L +
Sbjct: 730 HGTESQRLELVSRLTGN---VLPLSLQMYGCRVIQKALEMIDVDRQTQIVVE-LDGSVIK 785
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
+D NG++VIQ C++ + +++++ ++T GC V+Q +E+ K +
Sbjct: 786 CIRDQNGNHVIQKCIECVPEDRIQFIISAFYGQVLALSTHPYGCRVIQRVLEHCKDMNTQ 845
Query: 330 RLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
+++ EI+ + LA+D YGNYV+QH+L PQ ++++ +L GH V S K+ SNVV
Sbjct: 846 QIIMDEIMQSVYTLAQDQYGNYVIQHVLEHGKPQERSAIISKLAGHIVLMSQQKFASNVV 905
Query: 389 ERCLLESGEEQSTRIIIELLRSP----NVSMLLMHPFGNYVIQSAL 430
E+CL G E+ ++ E+L S + ++ PFGNYV+Q L
Sbjct: 906 EKCLTFGGPEERQLLVNEILGSTVENEPLQAMMKDPFGNYVVQKVL 951
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 134/258 (51%), Gaps = 11/258 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L GN++ L+ YGCR +Q+ + + + I VE+ V + + D GN+V+QK +E
Sbjct: 743 LTGNVLPLSLQMYGCRVIQKALEMIDVDRQTQIVVELDGSVIKCIRDQNGNHVIQKCIEC 802
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E+ RI +++ Q++ + + +G R + ++LE+ + +++ + TL
Sbjct: 803 VPED---RIQFIISAFYGQVLALSTHPYGCRVIQRVLEHCKDMNTQQIIMDEIMQSVYTL 859
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YVIQ+ ++H ++ +++++A + ++ K V++ C+ + +R+
Sbjct: 860 AQDQYGNYVIQHVLEHGKPQERSAIISKLAGHIVLMSQQKFASNVVEKCLTFGGPEERQL 919
Query: 331 LVAEIIANAL------LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
LV EI+ + + + +D +GNYVVQ +L + ++ ++ H + YG
Sbjct: 920 LVNEILGSTVENEPLQAMMKDPFGNYVVQKVLETCNDRSLELIISRIRVHLSALKRYTYG 979
Query: 385 SNVVERC--LLESGEEQS 400
++V R L+ +G E+S
Sbjct: 980 KHIVSRVEKLITTGGEES 997
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
Query: 297 NEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLL 356
+++A +TD+ G +Q +E + ++ ++ EII +A L D +GNYV+Q L
Sbjct: 669 SDIAGQVVEFSTDQYGSRFIQQKLETASVEEKNKIFPEIIPHARTLMTDVFGNYVIQKFL 728
Query: 357 ALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSML 416
L+ +L G+ + S YG V+++ L ++ T+I++EL S V
Sbjct: 729 DHGTESQRLELVSRLTGNVLPLSLQMYGCRVIQKALEMIDVDRQTQIVVELDGS--VIKC 786
Query: 417 LMHPFGNYVIQSAL 430
+ GN+VIQ +
Sbjct: 787 IRDQNGNHVIQKCI 800
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 2/184 (1%)
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
+E N + S + + V + D G IQ ++ S E+ + E+ + +
Sbjct: 655 IEGFKNNKTGSFEPSDIAGQVVEFSTDQYGSRFIQQKLETASVEEKNKIFPEIIPHARTL 714
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITAS 366
TD G V+Q +++ +QR LV+ + N L L+ YG V+Q L +
Sbjct: 715 MTDVFGNYVIQKFLDHGTESQRLELVSRLTGNVLPLSLQMYGCRVIQKALEMIDVDRQTQ 774
Query: 367 LLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVI 426
++ +L+G + ++ G++V+++C +E E + II V L HP+G VI
Sbjct: 775 IVVELDGSVIKCIRDQNGNHVIQKC-IECVPEDRIQFIISAFYG-QVLALSTHPYGCRVI 832
Query: 427 QSAL 430
Q L
Sbjct: 833 QRVL 836
>gi|224097831|ref|XP_002311080.1| predicted protein [Populus trichocarpa]
gi|222850900|gb|EEE88447.1| predicted protein [Populus trichocarpa]
Length = 999
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 158/288 (54%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G++V + DQYG R +Q+ + + EE IF E+I LM D FGNYV+QK
Sbjct: 669 LSDIVGHVVEFSTDQYGSRFIQQKLETASVEETNKIFPEIIPHALTLMTDVFGNYVIQKF 728
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
++ +E QR + LT ++ + L +G R + K LE + +Q +V A L
Sbjct: 729 LDQGTESQRIELASQLTG---HVLPLSLQMYGCRVIQKALEVIDVDRQTQMV-AELDGSV 784
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ C++ + +++ + ++T GC V+Q +E+ K
Sbjct: 785 MKCIRDQNGNHVIQKCIECVPGDRIQFITSAFYGQVVALSTHPYGCRVIQRVLEHCKDMN 844
Query: 328 RERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
++++ EI+ + LA+D YGNYV+QH+L PQ + ++R+L G V S K+ SN
Sbjct: 845 TQQVIMDEIMQSVCALAQDQYGNYVIQHVLEHGKPQQRSVIIRKLAGQIVLMSQQKFASN 904
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL G ++ ++ E+L S + + ++ PFGNYV+Q L
Sbjct: 905 VVEKCLTFGGPDERQLLVNEMLGSTDENEPLQAMMKDPFGNYVVQKVL 952
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+R L G IV +++ ++ +++ ++ +E +++ E++ E +M DPFGN
Sbjct: 886 IRKLAGQIVLMSQQKFASNVVEKCLTFGGPDERQLLVNEMLGSTDENEPLQAMMKDPFGN 945
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C + IL + L R H + V KL+
Sbjct: 946 YVVQKVLETCDDRSLELILSRIRIHLSALKRYTYGKHIVSRVEKLI 991
>gi|223994913|ref|XP_002287140.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976256|gb|EED94583.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 300
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 155/286 (54%), Gaps = 3/286 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR L GN+ L++DQ GCR LQ+ + I E + E M+DPFGNY+ QK+
Sbjct: 3 LRSLLGNVRRLSRDQVGCRLLQQALDEDGPSAATAILNEGLTFWAEAMVDPFGNYLFQKI 62
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E + E+R ++++ + +LV LN HG R+V K++E+ ++ AL P A
Sbjct: 63 LERITPEER---VILVKSVSTRLVNASLNLHGTRSVQKIVESKKQDTAAKILTDALEPSA 119
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
L D++G++ IQ + ++ T+++ + VA + +A + GCCV+Q C++
Sbjct: 120 ARLCIDSHGNHAIQRILLKLPYQYTQFIFDAVAASVEDVARHRHGCCVIQRCLDSRHSVA 179
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R LV I+ +L L +D YGNYVVQ++L + ++ + G + K+ SNV
Sbjct: 180 RSHLVTRIVEKSLELMQDAYGNYVVQYVLDVCGDDEVHAICESVIGRVCLLAIQKFSSNV 239
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVS 433
+E+CL + + EL S + L+M PFGNYV+Q AL VS
Sbjct: 240 MEKCLERCTDRVREEYLNELNDSDRLRELMMDPFGNYVVQRALSVS 285
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRIL 220
DR+ ELM+DPFGNYVVQ+ + + + Q R++
Sbjct: 263 DRLRELMMDPFGNYVVQRALSVSTHAQAIRLV 294
>gi|260942643|ref|XP_002615620.1| hypothetical protein CLUG_04502 [Clavispora lusitaniae ATCC 42720]
gi|238850910|gb|EEQ40374.1| hypothetical protein CLUG_04502 [Clavispora lusitaniae ATCC 42720]
Length = 780
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 158/293 (53%), Gaps = 18/293 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G++V KDQ+G R +Q+ + S EE EM+F E+ D +LM D FGNYV+QK
Sbjct: 436 LKDIHGHVVEFTKDQHGSRFIQQKLPSATAEEKEMVFSEIQDISYDLMTDVFGNYVIQKF 495
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S+ QR +L + + +L L +G R V + LE + QI +V L+
Sbjct: 496 FEFGSDSQRQILLGYMKGNIHEL---SLQMYGCRVVQRALEAIPLEDQIEIV-EELKDHV 551
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
++ KD NG++VIQ ++ E+ +++L+ + + Y ++T GC V+Q +EYS
Sbjct: 552 LSCAKDQNGNHVIQKSIEKIPFENVRFILDSLDSHIYHLSTHPYGCRVIQRLLEYSDIED 611
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ ++AE+ L +D YGNYV+QH+L P + V+FS +K+ SNV
Sbjct: 612 QQHILAELNRFLFYLIQDQYGNYVIQHILERGTPSEKEEIFEVAFSSIVNFSKHKFASNV 671
Query: 388 VERCLLESGEEQSTRIIIELL-------------RSPNVSMLLMHPFGNYVIQ 427
+E+C+ EQ RI E++ SP +++++ + NYVIQ
Sbjct: 672 IEKCIKHGTLEQRKRIWREVMLGNEDLEKETVADDSP-LALMMKDQYANYVIQ 723
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 3/192 (1%)
Query: 246 LLENL-TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
LLE + +NP+ L + V TKD +G IQ + + E+ + + +E+ D Y
Sbjct: 421 LLEEVRSNPKSKEFYLKDIHGHVVEFTKDQHGSRFIQQKLPSATAEEKEMVFSEIQDISY 480
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ +QR+ L+ + N L+ YG VVQ L +
Sbjct: 481 DLMTDVFGNYVIQKFFEFGSDSQRQILLGYMKGNIHELSLQMYGCRVVQRALEAIPLEDQ 540
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++ +L+ H +S + ++ G++V+++ +E ++ R I++ L S ++ L HP+G
Sbjct: 541 IEIVEELKDHVLSCAKDQNGNHVIQKS-IEKIPFENVRFILDSLDS-HIYHLSTHPYGCR 598
Query: 425 VIQSALLVSKVR 436
VIQ L S +
Sbjct: 599 VIQRLLEYSDIE 610
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 5/202 (2%)
Query: 230 LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSH 289
+V + HG R + + L + T ++ +V + ++ + L D G+YVIQ + S
Sbjct: 443 VVEFTKDQHGSRFIQQKLPSATA-EEKEMVFSEIQDISYDLMTDVFGNYVIQKFFEFGSD 501
Query: 290 EDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGN 349
+ LL + N + ++ GC V+Q +E + +V E+ + L A+D GN
Sbjct: 502 SQRQILLGYMKGNIHELSLQMYGCRVVQRALEAIPLEDQIEIVEELKDHVLSCAKDQNGN 561
Query: 350 YVVQHLLALRVP-QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL 408
+V+Q + ++P + +L L+ H S + YG V++R L S E I+ EL
Sbjct: 562 HVIQKSIE-KIPFENVRFILDSLDSHIYHLSTHPYGCRVIQRLLEYSDIEDQQHILAELN 620
Query: 409 RSPNVSMLLMHPFGNYVIQSAL 430
R + L+ +GNYVIQ L
Sbjct: 621 RF--LFYLIQDQYGNYVIQHIL 640
>gi|298709331|emb|CBJ31267.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 729
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 159/301 (52%), Gaps = 17/301 (5%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPK--------------EEIEMIFVEVIDRVC 192
+L+D+ G + ++++DQ GCR LQ+ + P + + IF+E + +
Sbjct: 380 ALKDVLGKVYSMSRDQVGCRLLQQKLDECPDRPPEGDAGKEPSEDDAVSAIFMEALPNLS 439
Query: 193 ELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTN 252
+MIDPFGNY+ QKL + QR + +T+ ++ +N HG R V K++E
Sbjct: 440 MMMIDPFGNYLFQKLFVKVDDHQRLLAVEAVTD---RMPEAAVNLHGTRCVQKVVELCRT 496
Query: 253 PQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSG 312
Q +++ +L P V L+ D NG++V+Q ++H ++L + + +A + G
Sbjct: 497 DAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAIHRHG 556
Query: 313 CCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLE 372
CCVLQ C++ + R +L+ E+ N L L +D +GNYVVQ++L + T L
Sbjct: 557 CCVLQRCLDAAGPNLRIKLIEEVARNGLRLMQDPFGNYVVQYVLKTCSREETYMLCSAPL 616
Query: 373 GHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLV 432
GH S S K+ SNV+E CL + E ++ + EL + + L++ + NYV+Q AL V
Sbjct: 617 GHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTV 676
Query: 433 S 433
+
Sbjct: 677 A 677
>gi|254568676|ref|XP_002491448.1| Protein of the mitochondrial outer surface [Komagataella pastoris
GS115]
gi|238031245|emb|CAY69168.1| Protein of the mitochondrial outer surface [Komagataella pastoris
GS115]
gi|328352042|emb|CCA38441.1| Pumilio homolog 1 [Komagataella pastoris CBS 7435]
Length = 759
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 164/293 (55%), Gaps = 18/293 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRD+ G+ A+DQ+G R +Q+ +S KEE + IF E+ ELM D FGNYV+QK
Sbjct: 420 LRDIYGHGPEFARDQHGSRFIQQQLSKATKEEKDTIFEEIEPTSYELMTDVFGNYVIQKY 479
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E SEEQ+ R+L ++T ++ + L +G R V + LE + QQI + + L+
Sbjct: 480 FEHGSEEQKARLLKIMTG---KVQSLSLQMYGCRVVQRALEFVQLEQQIEIA-SELQDNV 535
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ L +D NG++VIQ ++ S + ++L + + Y ++T GC V+Q +EY ++
Sbjct: 536 LQLVEDQNGNHVIQKSIEKISFDQISFILESLRQHIYHLSTHPYGCRVIQRLLEYCSESE 595
Query: 328 RERLVAEIIANALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
++ + E+++N + L +D YGNYV+QH+L +++ + + V FS +K+ SN
Sbjct: 596 -QKFILEVLSNHIFYLIQDQYGNYVIQHILEFGEEGYRSTITEIVTKNLVMFSKHKFASN 654
Query: 387 VVERCLLESGEEQSTRIIIELLR------------SPNVSMLLMHPFGNYVIQ 427
VE+C++ +E + ELL+ + +++++ PF NYV+Q
Sbjct: 655 AVEKCIIYGNKEHRHMLFNELLKDNKSLEVTTVDDNSALALMMKDPFANYVVQ 707
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 5/196 (2%)
Query: 236 NTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYL 295
+ HG R + + L T ++ + + P + L D G+YVIQ +H S E L
Sbjct: 433 DQHGSRFIQQQLSKATK-EEKDTIFEEIEPTSYELMTDVFGNYVIQKYFEHGSEEQKARL 491
Query: 296 LNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHL 355
L + ++ GC V+Q +E+ + Q+ + +E+ N L L ED GN+V+Q
Sbjct: 492 LKIMTGKVQSLSLQMYGCRVVQRALEFVQLEQQIEIASELQDNVLQLVEDQNGNHVIQKS 551
Query: 356 L-ALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVS 414
+ + QI+ +L L H S + YG V++R LLE E + I+E+L S ++
Sbjct: 552 IEKISFDQISF-ILESLRQHIYHLSTHPYGCRVIQR-LLEYCSESEQKFILEVL-SNHIF 608
Query: 415 MLLMHPFGNYVIQSAL 430
L+ +GNYVIQ L
Sbjct: 609 YLIQDQYGNYVIQHIL 624
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 2/137 (1%)
Query: 294 YLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQ 353
Y L ++ + A D+ G +Q + + +++ + EI + L D +GNYV+Q
Sbjct: 418 YRLRDIYGHGPEFARDQHGSRFIQQQLSKATKEEKDTIFEEIEPTSYELMTDVFGNYVIQ 477
Query: 354 HLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNV 413
+ A LL+ + G S S YG VV+R L EQ I EL NV
Sbjct: 478 KYFEHGSEEQKARLLKIMTGKVQSLSLQMYGCRVVQRALEFVQLEQQIEIASELQD--NV 535
Query: 414 SMLLMHPFGNYVIQSAL 430
L+ GN+VIQ ++
Sbjct: 536 LQLVEDQNGNHVIQKSI 552
>gi|213408907|ref|XP_002175224.1| PUF4 [Schizosaccharomyces japonicus yFS275]
gi|212003271|gb|EEB08931.1| PUF4 [Schizosaccharomyces japonicus yFS275]
Length = 846
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 142/290 (48%), Gaps = 45/290 (15%)
Query: 141 DSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFG 200
++ S L G I L KDQY CR LQ+ + P+ + ++F EV + ELM DPF
Sbjct: 556 EALSTSPLESFLGKIYPLCKDQYRCRFLQKKLDENPRNNVAIVFPEVYAHINELMTDPF- 614
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVL 260
++E LT+ +QISL+
Sbjct: 615 --------------------------------------------DIIEKLTSNEQISLLT 630
Query: 261 AALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCV 320
AL P L+ D NG++VIQ C+ FS E +++ + +N IAT + GCCVLQ +
Sbjct: 631 LALSPHVAKLSCDLNGNHVIQKCLHKFSSEKLQFIFTAMEENIVEIATHRHGCCVLQRSL 690
Query: 321 EYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSC 380
+ + + RL ++IANAL L +D +GNYVVQ++ LR + L+ Q GH S
Sbjct: 691 DRAGEENKRRLAFKVIANALALVQDPFGNYVVQYVFDLRNDEYNDMLVTQFSGHICDLSM 750
Query: 381 NKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
K+ SN +E+C+ S E R++ E+L+S + LL + NYVIQS L
Sbjct: 751 QKFSSNAIEKCIRVSTPESCERMLEEVLQSSRMEKLLKDSYANYVIQSFL 800
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSE 213
NIV +A ++GC LQR++ +E + +VI L+ DPFGNYVVQ + +L ++
Sbjct: 672 NIVEIATHRHGCCVLQRSLDRAGEENKRRLAFKVIANALALVQDPFGNYVVQYVFDLRND 731
Query: 214 EQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKD 273
E ++ + L +++ I +++ + + + VL + R L KD
Sbjct: 732 EYNDMLVTQFSGHICDLSMQKFSSNAIEKCIRVSTPESCERMLEEVLQSSR--MEKLLKD 789
Query: 274 TNGHYVIQYCVKHFSHEDTKYLLN-------EVADNCYG 305
+ +YVIQ + H + E + LL ++ + C+G
Sbjct: 790 SYANYVIQSFLTHVTGEMQQRLLQAINPLLPKIRNTCHG 828
>gi|384494635|gb|EIE85126.1| hypothetical protein RO3G_09836 [Rhizopus delemar RA 99-880]
Length = 680
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 160/288 (55%), Gaps = 9/288 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G+IV + DQ+G R +Q+ + + +EE EM+F E++ +LM D FGNYV+QK E
Sbjct: 332 LEGHIVEFSGDQHGSRFIQQKLETASREEKEMVFEEILPNALQLMTDVFGNYVLQKFFEH 391
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
++ Q+ + + + ++ + L +G R + K LE + QQ L+ L +
Sbjct: 392 GNQLQKAVLARQM---EGHVMSLSLQMYGCRVIQKALEYVLTEQQACLI-RELDGYVLKC 447
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
KD NG++VIQ ++ + +++++ Y ++T GC V+Q +EY G Q+
Sbjct: 448 VKDQNGNHVIQKAIERVPAQHIRFIIDAFKGQVYHLSTHPYGCRVIQRVLEYCTGEQKNP 507
Query: 331 LVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
L+ E+ L +D YGNYV+QH+L P+ A++++++ G +SFS +K+ SNVVE+
Sbjct: 508 LLKELDDFIESLIKDQYGNYVIQHILERGEPRDKANIIKKISGRVLSFSKHKFASNVVEK 567
Query: 391 CLLESGEEQSTRIIIELLRSPN-----VSMLLMHPFGNYVIQSALLVS 433
C+ +EQ I E+++ P + +++ + NYV+Q L V+
Sbjct: 568 CVDNGSKEQRQDFIDEVVKCPTDGECPLVLMMKDQYANYVVQRMLEVA 615
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 118/251 (47%), Gaps = 15/251 (5%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
R + G++++L+ YGCR +Q+ + + E+ + E+ V + + D GN+V+QK +
Sbjct: 402 RQMEGHVMSLSLQMYGCRVIQKALEYVLTEQQACLIRELDGYVLKCVKDQNGNHVIQKAI 461
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E Q R ++ D F+ L+TH G R + ++LE T Q+ L L L
Sbjct: 462 ERVPA-QHIRFII----DAFKGQVYHLSTHPYGCRVIQRVLEYCTGEQKNPL-LKELDDF 515
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+L KD G+YVIQ+ ++ D ++ +++ + K V++ CV+
Sbjct: 516 IESLIKDQYGNYVIQHILERGEPRDKANIIKKISGRVLSFSKHKFASNVVEKCVDNGSKE 575
Query: 327 QRERLVAEIIA-------NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFS 379
QR+ + E++ +L+ +D Y NYVVQ +L + L+ H
Sbjct: 576 QRQDFIDEVVKCPTDGECPLVLMMKDQYANYVVQRMLEVATEDQRNKLIETTRPHLALLK 635
Query: 380 CNKYGSNVVER 390
YG +++++
Sbjct: 636 KYPYGKHLIQK 646
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 2/194 (1%)
Query: 237 THGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLL 296
T G+ LLE N +Q + L L V + D +G IQ ++ S E+ + +
Sbjct: 306 TAGLVTRSPLLEQFRNSKQKNYELIQLEGHIVEFSGDQHGSRFIQQKLETASREEKEMVF 365
Query: 297 NEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLL 356
E+ N + TD G VLQ E+ Q+ L ++ + + L+ YG V+Q L
Sbjct: 366 EEILPNALQLMTDVFGNYVLQKFFEHGNQLQKAVLARQMEGHVMSLSLQMYGCRVIQKAL 425
Query: 357 ALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSML 416
+ + A L+R+L+G+ + ++ G++V+++ +E Q R II+ + V L
Sbjct: 426 EYVLTEQQACLIRELDGYVLKCVKDQNGNHVIQKA-IERVPAQHIRFIIDAFKG-QVYHL 483
Query: 417 LMHPFGNYVIQSAL 430
HP+G VIQ L
Sbjct: 484 STHPYGCRVIQRVL 497
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI----DRVCEL---MIDPFG 200
++ + G +++ +K ++ +++ + + KE+ + EV+ D C L M D +
Sbjct: 545 IKKISGRVLSFSKHKFASNVVEKCVDNGSKEQRQDFIDEVVKCPTDGECPLVLMMKDQYA 604
Query: 201 NYVVQKLVELCSEEQRTRIL 220
NYVVQ+++E+ +E+QR +++
Sbjct: 605 NYVVQRMLEVATEDQRNKLI 624
>gi|258571557|ref|XP_002544582.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904852|gb|EEP79253.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1139
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 102/284 (35%), Positives = 144/284 (50%), Gaps = 56/284 (19%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L R + L KDQ+GCR+LQR + E ++MIF+E V ELM DPFGNY+ QKL
Sbjct: 768 LEQYRDELYGLCKDQHGCRYLQRKLEERIPENVQMIFLETHMHVVELMTDPFGNYLCQKL 827
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E ++EQRT ++ N QLV I LN HG RA+ K++E ++ P+Q V+ ALR
Sbjct: 828 LEFSNDEQRT---ALINNAAPQLVSIALNQHGTRALQKMIEFISTPEQTQTVINALRGKV 884
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V L +D NG++VIQ C+ S VAD
Sbjct: 885 VELVQDLNGNHVIQKCLNRLS----------VAD-------------------------- 908
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
A+D +GNYVVQ++L L P T L + G S K+ SNV
Sbjct: 909 ---------------AQDPFGNYVVQYILDLAEPHFTEPLCQTFVGKVSMLSKQKFSSNV 953
Query: 388 VERCLLESGEEQSTRIII-ELLRSPNVSMLLMHPFGNYVIQSAL 430
+E+C + E QS R++I E+L + + +L F NYV+Q+A+
Sbjct: 954 IEKC-PRTAEFQSRRLLIQEMLPAQELERMLRDSFANYVVQTAM 996
>gi|255566432|ref|XP_002524201.1| pumilio, putative [Ricinus communis]
gi|223536478|gb|EEF38125.1| pumilio, putative [Ricinus communis]
Length = 999
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 191/384 (49%), Gaps = 24/384 (6%)
Query: 63 NVNDRIFDNPVHHFPLVENGF-FSHPCQEAEPINQDSSILNLLHNHNFD-GLRSNGNELS 120
++N + NP + +G P + PI S + + N F G+R+ LS
Sbjct: 569 SMNHNYYGNPAFGLGMSYSGSPIGGPLLPSSPIGSGSPVRHSERNMRFTAGMRN----LS 624
Query: 121 SVPRNQWMS----SLSLKRNQWLQDSFD-----CSSLRDLRGNIVALAKDQYGCRHLQRT 171
W S +L L D F C L ++ G++V + DQYG R +Q+
Sbjct: 625 GGVMGSWHSETGGNLGEDFPSSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQK 684
Query: 172 MSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLV 231
+ + EE M+F E++ + LM D FGNYV+QK E S Q + LT ++
Sbjct: 685 LETATTEEKNMVFNEIMPQALSLMTDVFGNYVIQKFFEHGSAAQIRELADQLTG---HVL 741
Query: 232 RICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHED 291
+ L +G R + K +E + QQ +V A L + +D NG++VIQ C++ +
Sbjct: 742 TLSLQMYGCRVIQKAIEVVELDQQTKMV-AELDGHIMRCVRDQNGNHVIQKCIECVPEDA 800
Query: 292 TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVA-EIIANALLLAEDCYGNY 350
+++++ D ++T GC V+Q +E+ A+ +R++ EI+ + L+LA+D YGNY
Sbjct: 801 IQFIVSTFYDQVVTLSTHPYGCRVIQRVLEHCHDAKTQRIMMDEILQSVLMLAQDQYGNY 860
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
VVQH+L P +S++++L G V S K+ SNV+E+CL + ++ E+L +
Sbjct: 861 VVQHVLEHGKPHERSSIIKKLTGQIVQMSQQKFASNVIEKCLTFGTPAERQALVNEMLGT 920
Query: 411 PN----VSMLLMHPFGNYVIQSAL 430
+ + +++ F NYV+Q L
Sbjct: 921 TDENEPLQVMMKDQFANYVVQKVL 944
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDP 198
S ++ L G IV +++ ++ +++ ++ E + + E++ E +M D
Sbjct: 875 SSIIKKLTGQIVQMSQQKFASNVIEKCLTFGTPAERQALVNEMLGTTDENEPLQVMMKDQ 934
Query: 199 FGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
F NYVVQK++E C ++Q IL + L + H + V KL+
Sbjct: 935 FANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLV 983
>gi|440302948|gb|ELP95254.1| hypothetical protein EIN_430600 [Entamoeba invadens IP1]
Length = 452
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 162/296 (54%), Gaps = 5/296 (1%)
Query: 137 QWLQDSFDCSSLRDLRGN-IVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELM 195
Q D D + + ++ N + + DQ+GCR LQ+ + + I+ I+ ++ + L+
Sbjct: 115 QSYTDVGDMTKMENIDDNEFLKMCCDQFGCRCLQKKLEDDDDDAIDEIYERMLPIMNNLI 174
Query: 196 IDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ 255
D FGNY+ QKL+E+ +EQR IL ++N+ + I N HG R+V K++ T +
Sbjct: 175 ADQFGNYLCQKLIEVVDDEQRLDILKCVSNN---IGIISKNIHGTRSVQKMINCATTKAE 231
Query: 256 ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV-ADNCYGIATDKSGCC 314
I ++ +L P V L D NG++VIQ C+K FS E K++ + + D+ I K GCC
Sbjct: 232 IDELILSLSPHIVDLVFDGNGNHVIQECLKTFSKEQNKFIFDGILGDSFVEICEHKHGCC 291
Query: 315 VLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGH 374
V+Q C+++ Q +LV ++I+N L + D YGNYVVQ++L + V + + + +
Sbjct: 292 VVQRCIDFGNRGQLNKLVDKVISNTLEIITDPYGNYVVQYILKVDVDHVCMDVTKIILDD 351
Query: 375 YVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ S K+ SNV+E+ ++ + + L+ +V LL F NYVIQ+ L
Sbjct: 352 LIVLSTQKFSSNVIEQLVMSDEVGVKELMFDKFLQYKDVERLLQGSFSNYVIQTCL 407
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 104/236 (44%), Gaps = 5/236 (2%)
Query: 200 GNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLV 259
G+ V Q+ S + M DD + +++C + G R + K LE+ + +
Sbjct: 104 GDQVQQQFGTFQSYTDVGDMTKMENIDDNEFLKMCCDQFGCRCLQKKLEDDDDDAIDEIY 163
Query: 260 LAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHC 319
L P L D G+Y+ Q ++ E +L V++N I+ + G +Q
Sbjct: 164 ERML-PIMNNLIADQFGNYLCQKLIEVVDDEQRLDILKCVSNNIGIISKNIHGTRSVQKM 222
Query: 320 VE-YSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGH-YVS 377
+ + A+ + L+ + + + L D GN+V+Q L + + + G +V
Sbjct: 223 INCATTKAEIDELILSLSPHIVDLVFDGNGNHVIQECLKTFSKEQNKFIFDGILGDSFVE 282
Query: 378 FSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVS 433
+K+G VV+RC+ Q +++ +++ N ++ P+GNYV+Q L V
Sbjct: 283 ICEHKHGCCVVQRCIDFGNRGQLNKLVDKVIS--NTLEIITDPYGNYVVQYILKVD 336
>gi|255580219|ref|XP_002530940.1| pumilio, putative [Ricinus communis]
gi|223529499|gb|EEF31455.1| pumilio, putative [Ricinus communis]
Length = 1024
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 158/288 (54%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ ++V + DQYG R +Q+ + EE IF E+I LM D FGNYV+QK
Sbjct: 684 LSDIVEHVVEFSTDQYGSRFIQQKLEIATAEEKNKIFPEIIPHARTLMTDVFGNYVIQKF 743
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E +E QRT + LT ++ + L +G R + K LE + QQ +V A L
Sbjct: 744 FEHGTESQRTELANQLT---AHVLPLSLQMYGCRVIQKALEVVGVDQQTEMV-AELDGSI 799
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ C++ + + +++ ++T GC V+Q +E+ +
Sbjct: 800 MKCVRDQNGNHVIQKCIECVPEDRIQSIISSFYGQVVALSTHPYGCRVIQRVLEHCESID 859
Query: 328 RERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
++++ EI+ + +LA+D YGNYV+QH+L P ++++ +L G V S K+ SN
Sbjct: 860 TQQIIMDEIMQSVCVLAQDQYGNYVIQHVLEHGKPHERSAIICKLAGQIVKMSQQKFASN 919
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL+ G E+ ++ E+L S + + +++ PFGNYV+Q L
Sbjct: 920 VVEKCLIFGGPEERQILVNEMLGSTDENEPLQVMMKDPFGNYVVQKVL 967
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Query: 280 IQYCVKHFSHEDTK-YLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIAN 338
+ + F + T+ + L+++ ++ +TD+ G +Q +E + ++ ++ EII +
Sbjct: 667 VSSLLDEFKNNKTRSFELSDIVEHVVEFSTDQYGSRFIQQKLEIATAEEKNKIFPEIIPH 726
Query: 339 ALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEE 398
A L D +GNYV+Q L QL H + S YG V+++ L G +
Sbjct: 727 ARTLMTDVFGNYVIQKFFEHGTESQRTELANQLTAHVLPLSLQMYGCRVIQKALEVVGVD 786
Query: 399 QSTRIIIELLRSPNVSMLLMHPFGNYVIQ 427
Q T ++ EL S + + GN+VIQ
Sbjct: 787 QQTEMVAELDGS--IMKCVRDQNGNHVIQ 813
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 2/190 (1%)
Query: 241 RAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVA 300
R V LL+ N + S L+ + V + D G IQ ++ + E+ + E+
Sbjct: 665 RYVSSLLDEFKNNKTRSFELSDIVEHVVEFSTDQYGSRFIQQKLEIATAEEKNKIFPEII 724
Query: 301 DNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRV 360
+ + TD G V+Q E+ +QR L ++ A+ L L+ YG V+Q L +
Sbjct: 725 PHARTLMTDVFGNYVIQKFFEHGTESQRTELANQLTAHVLPLSLQMYGCRVIQKALEVVG 784
Query: 361 PQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHP 420
++ +L+G + ++ G++V+++C+ E++ II V L HP
Sbjct: 785 VDQQTEMVAELDGSIMKCVRDQNGNHVIQKCIECVPEDRIQSIISSFY--GQVVALSTHP 842
Query: 421 FGNYVIQSAL 430
+G VIQ L
Sbjct: 843 YGCRVIQRVL 852
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 136 NQWLQDSFDC-------SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFV-EV 187
N +Q +C S + G +VAL+ YGCR +QR + + + I + E+
Sbjct: 809 NHVIQKCIECVPEDRIQSIISSFYGQVVALSTHPYGCRVIQRVLEHCESIDTQQIIMDEI 868
Query: 188 IDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
+ VC L D +GNYV+Q ++E +R+ I+ L Q+V++ V K L
Sbjct: 869 MQSVCVLAQDQYGNYVIQHVLEHGKPHERSAIICKLAG---QIVKMSQQKFASNVVEKCL 925
Query: 248 ENLTNPQQISLVLAAL-------RPGAVTLTKDTNGHYVIQYCVK 285
P++ +++ + P V + KD G+YV+Q ++
Sbjct: 926 I-FGGPEERQILVNEMLGSTDENEPLQV-MMKDPFGNYVVQKVLE 968
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGNYVV 204
L G IV +++ ++ +++ + EE +++ E++ E +M DPFGNYVV
Sbjct: 904 LAGQIVKMSQQKFASNVVEKCLIFGGPEERQILVNEMLGSTDENEPLQVMMKDPFGNYVV 963
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
QK++E C + IL + L R H + V KL+
Sbjct: 964 QKVLETCDDRSLELILSRIKIHLNALKRYTYGKHIVSRVEKLI 1006
>gi|440291461|gb|ELP84730.1| meiotic coiled-coil protein, putative [Entamoeba invadens IP1]
Length = 470
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 160/280 (57%), Gaps = 9/280 (3%)
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSE 213
N + +DQ GCR LQ+ + +E I+ +++ + LMIDPFGNY+ QKL+E+
Sbjct: 148 NFPKMCRDQVGCRFLQQQLEEGNTGTLEYIYQQIVPLLDSLMIDPFGNYLCQKLIEVVKP 207
Query: 214 EQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKD 273
+QR I+ + + ++ I N +G R+V KL+ + ++ +++L+ L P + L D
Sbjct: 208 DQRVEIIEEIGD---KIHTISRNIYGTRSVQKLINSASSKNEVNLIRKYLEPYVINLIFD 264
Query: 274 TNGHYVIQYCVKHFSHEDTKYLLNEVAD--NCYGIATDKSGCCVLQHCVEYSKGAQRERL 331
NG++VIQ C+K F + ++ + + + N +++ K GCCV+Q C++ Q L
Sbjct: 265 INGNHVIQECLKVFDKPENSFIFDAILENGNLVRVSSHKHGCCVVQRCIDNGNEEQLSSL 324
Query: 332 VAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERC 391
V +I+ +L L +D +GNYVVQ++L + ++ + + + + S K+ SNV+E+
Sbjct: 325 VNDIVKYSLALVKDAFGNYVVQYVLGIE--GVSVRVTNCIIENLIELSMQKFSSNVIEK- 381
Query: 392 LLESGEEQSTRIIIE-LLRSPNVSMLLMHPFGNYVIQSAL 430
L+ +G + II E L+ +V++LL F NYVIQ+ L
Sbjct: 382 LVATGNCKVKEIIFEQFLKFKDVAILLQDSFANYVIQTCL 421
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 97/209 (46%), Gaps = 6/209 (2%)
Query: 232 RICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHED 291
++C + G R + + LE N + + + P +L D G+Y+ Q ++ +
Sbjct: 151 KMCRDQVGCRFLQQQLEE-GNTGTLEYIYQQIVPLLDSLMIDPFGNYLCQKLIEVVKPDQ 209
Query: 292 TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALL-LAEDCYGNY 350
++ E+ D + I+ + G +Q + + L+ + + ++ L D GN+
Sbjct: 210 RVEIIEEIGDKIHTISRNIYGTRSVQKLINSASSKNEVNLIRKYLEPYVINLIFDINGNH 269
Query: 351 VVQHLL-ALRVPQITASLLRQLE-GHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL 408
V+Q L P+ + LE G+ V S +K+G VV+RC+ EEQ + ++ +++
Sbjct: 270 VIQECLKVFDKPENSFIFDAILENGNLVRVSSHKHGCCVVQRCIDNGNEEQLSSLVNDIV 329
Query: 409 RSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
+ L+ FGNYV+Q L + V +
Sbjct: 330 KYS--LALVKDAFGNYVVQYVLGIEGVSV 356
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 1/132 (0%)
Query: 301 DNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRV 360
+N + D+ GC LQ +E E + +I+ L D +GNY+ Q L+ +
Sbjct: 147 ENFPKMCRDQVGCRFLQQQLEEGNTGTLEYIYQQIVPLLDSLMIDPFGNYLCQKLIEVVK 206
Query: 361 PQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHP 420
P ++ ++ + S N YG+ V++ L+ S ++ +I P V L+
Sbjct: 207 PDQRVEIIEEIGDKIHTISRNIYGTRSVQK-LINSASSKNEVNLIRKYLEPYVINLIFDI 265
Query: 421 FGNYVIQSALLV 432
GN+VIQ L V
Sbjct: 266 NGNHVIQECLKV 277
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 66/134 (49%), Gaps = 8/134 (5%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
GN+V ++ ++GC +QR + + +E++ + +++ L+ D FGNYVVQ ++ +
Sbjct: 294 GNLVRVSSHKHGCCVVQRCIDNGNEEQLSSLVNDIVKYSLALVKDAFGNYVVQYVLGI-- 351
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLE--NLTNPQQISLVLAALRPGAVTL 270
E R+ + + L+ + + + KL+ N + I + A+ L
Sbjct: 352 EGVSVRVTNCIIEN---LIELSMQKFSSNVIEKLVATGNCKVKEIIFEQFLKFKDVAI-L 407
Query: 271 TKDTNGHYVIQYCV 284
+D+ +YVIQ C+
Sbjct: 408 LQDSFANYVIQTCL 421
>gi|449487299|ref|XP_004157558.1| PREDICTED: pumilio homolog 4-like [Cucumis sativus]
Length = 997
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 155/288 (53%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ +++ + DQYG R +Q+ + + EE IF E+I LM D FGNYV+QK
Sbjct: 656 LSDIVDHVIEFSMDQYGSRFIQQKLETANVEEKTKIFPEIIPHARTLMTDVFGNYVIQKF 715
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + QR + L+ ++ + L +G R + K LE + + QQ +V A L
Sbjct: 716 FEHGTASQRKELAEQLSG---HVLPLSLQMYGCRVIQKALEVVDSEQQTQMV-AELDGSI 771
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ C++ E +++++ ++T GC V+Q +E+ +
Sbjct: 772 MKCVRDQNGNHVIQKCIECIPQERIQFIISAFYGQVLALSTHPYGCRVIQRVLEHCDDSN 831
Query: 328 RERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
++++ EI+ + LLA+D YGNYV+QH+L P + ++ +L G V S K+ SN
Sbjct: 832 TQQIIMDEIMQSVCLLAQDQYGNYVIQHVLEFGKPHERSVIISKLAGQIVKMSQQKFASN 891
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL E+ ++ E+L S + + ++ PFGNYV+Q L
Sbjct: 892 VVEKCLTFGSPEERQLLVNEILGSTDENEPLQAMMKDPFGNYVVQKVL 939
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 102/206 (49%), Gaps = 4/206 (1%)
Query: 230 LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSH 289
++ ++ +G R + + LE N ++ + + + P A TL D G+YVIQ +H +
Sbjct: 663 VIEFSMDQYGSRFIQQKLET-ANVEEKTKIFPEIIPHARTLMTDVFGNYVIQKFFEHGTA 721
Query: 290 EDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGN 349
K L +++ + ++ GC V+Q +E Q+ ++VAE+ + + D GN
Sbjct: 722 SQRKELAEQLSGHVLPLSLQMYGCRVIQKALEVVDSEQQTQMVAELDGSIMKCVRDQNGN 781
Query: 350 YVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIII-ELL 408
+V+Q + + ++ G ++ S + YG V++R L + + +II+ E++
Sbjct: 782 HVIQKCIECIPQERIQFIISAFYGQVLALSTHPYGCRVIQRVLEHCDDSNTQQIIMDEIM 841
Query: 409 RSPNVSMLLMHPFGNYVIQSALLVSK 434
+S V +L +GNYVIQ L K
Sbjct: 842 QS--VCLLAQDQYGNYVIQHVLEFGK 865
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S++ + L+++ D+ + D+ G +Q +E + ++ ++ EII +A L D +
Sbjct: 648 SNKTRSFELSDIVDHVIEFSMDQYGSRFIQQKLETANVEEKTKIFPEIIPHARTLMTDVF 707
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYV+Q L QL GH + S YG V+++ L EQ T+++ EL
Sbjct: 708 GNYVIQKFFEHGTASQRKELAEQLSGHVLPLSLQMYGCRVIQKALEVVDSEQQTQMVAEL 767
Query: 408 LRSPNVSMLLMHPFGNYVIQ 427
S + + GN+VIQ
Sbjct: 768 DGS--IMKCVRDQNGNHVIQ 785
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LL+ + + S L+ + + + D G IQ ++ + E+ + E+ +
Sbjct: 642 LLDEFKSNKTRSFELSDIVDHVIEFSMDQYGSRFIQQKLETANVEEKTKIFPEIIPHART 701
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ +QR+ L ++ + L L+ YG V+Q L + +
Sbjct: 702 LMTDVFGNYVIQKFFEHGTASQRKELAEQLSGHVLPLSLQMYGCRVIQKALEVVDSEQQT 761
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++ +L+G + ++ G++V+++C +E ++ + II V L HP+G V
Sbjct: 762 QMVAELDGSIMKCVRDQNGNHVIQKC-IECIPQERIQFIISAFYG-QVLALSTHPYGCRV 819
Query: 426 IQSAL 430
IQ L
Sbjct: 820 IQRVL 824
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ ++ EE +++ E++ E +M DPFGN
Sbjct: 873 ISKLAGQIVKMSQQKFASNVVEKCLTFGSPEERQLLVNEILGSTDENEPLQAMMKDPFGN 932
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C + IL + L R H + V KL+
Sbjct: 933 YVVQKVLESCDDHSLELILSRIRVHLNSLKRYTYGKHIVSRVEKLI 978
>gi|300120006|emb|CBK19560.2| unnamed protein product [Blastocystis hominis]
Length = 328
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 152/268 (56%), Gaps = 3/268 (1%)
Query: 166 RHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTN 225
RHLQ + +++++ E+ +R+ LM + FGNY+ QK++E+ S++QR ++L+M+ +
Sbjct: 12 RHLQLALDQEGTSLVDVLYEEMGERIGLLMTNQFGNYLFQKILEMSSDQQRRQLLVMVQS 71
Query: 226 DDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVK 285
QL + HG R V KL+ P ++ +L L P V L D NG++VI+ C+K
Sbjct: 72 ---QLREASKDVHGTRCVQKLIHLCRLPDMVNRILDGLCPFVVELCADVNGNHVIKCCLK 128
Query: 286 HFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAED 345
+ E + LL+EV D+C I+ + GC ++Q C+E + G +RL I A+AL L D
Sbjct: 129 SMAAELRQRLLDEVVDHCIEISKEMYGCSIIQKCIEIASGESADRLFDTIEAHALDLMRD 188
Query: 346 CYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIII 405
Y NYV+Q+L+ P + R + H S K SNVVE+ L E II
Sbjct: 189 RYANYVIQYLIENARPSESLRFCRCVLTHVEELSKEKCSSNVVEKSLNRGDEATRDSIIN 248
Query: 406 ELLRSPNVSMLLMHPFGNYVIQSALLVS 433
E++ + ++ +L+ P+ NYVIQ AL++S
Sbjct: 249 EIVNASDLRSMLLDPYANYVIQKALVLS 276
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 93/238 (39%), Gaps = 42/238 (17%)
Query: 155 IVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEE 214
+V L D G ++ + S+ E + + EV+D E+ + +G ++QK +E+ S E
Sbjct: 110 VVELCADVNGNHVIKCCLKSMAAELRQRLLDEVVDHCIEISKEMYGCSIIQKCIEIASGE 169
Query: 215 QRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDT 274
R+ + A+ L +D
Sbjct: 170 SADRL----------------------------------------FDTIEAHALDLMRDR 189
Query: 275 NGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAE 334
+YVIQY +++ ++ V + ++ +K V++ + A R+ ++ E
Sbjct: 190 YANYVIQYLIENARPSESLRFCRCVLTHVEELSKEKCSSNVVEKSLNRGDEATRDSIINE 249
Query: 335 IIANALL--LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
I+ + L + D Y NYV+Q L L L + +E + + +K G +++ +
Sbjct: 250 IVNASDLRSMLLDPYANYVIQKALVLSNADQRGRLKQAIEPYAKDLADSKTGKHILSK 307
>gi|449449485|ref|XP_004142495.1| PREDICTED: pumilio homolog 4-like [Cucumis sativus]
Length = 996
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 155/288 (53%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ +++ + DQYG R +Q+ + + EE IF E+I LM D FGNYV+QK
Sbjct: 656 LSDIVDHVIEFSMDQYGSRFIQQKLETANVEEKTKIFPEIIPHARTLMTDVFGNYVIQKF 715
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + QR + L+ ++ + L +G R + K LE + + QQ +V A L
Sbjct: 716 FEHGTASQRKELAEQLSG---HVLPLSLQMYGCRVIQKALEVVDSEQQTQMV-AELDGSI 771
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ C++ E +++++ ++T GC V+Q +E+ +
Sbjct: 772 MKCVRDQNGNHVIQKCIECIPQERIQFIISAFYGQVLALSTHPYGCRVIQRVLEHCDDSN 831
Query: 328 RERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
++++ EI+ + LLA+D YGNYV+QH+L P + ++ +L G V S K+ SN
Sbjct: 832 TQQIIMDEIMQSVCLLAQDQYGNYVIQHVLEFGKPHERSVIISKLAGQIVKMSQQKFASN 891
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL E+ ++ E+L S + + ++ PFGNYV+Q L
Sbjct: 892 VVEKCLTFGSPEERQLLVNEILGSTDENEPLQAMMKDPFGNYVVQKVL 939
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 102/206 (49%), Gaps = 4/206 (1%)
Query: 230 LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSH 289
++ ++ +G R + + LE N ++ + + + P A TL D G+YVIQ +H +
Sbjct: 663 VIEFSMDQYGSRFIQQKLET-ANVEEKTKIFPEIIPHARTLMTDVFGNYVIQKFFEHGTA 721
Query: 290 EDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGN 349
K L +++ + ++ GC V+Q +E Q+ ++VAE+ + + D GN
Sbjct: 722 SQRKELAEQLSGHVLPLSLQMYGCRVIQKALEVVDSEQQTQMVAELDGSIMKCVRDQNGN 781
Query: 350 YVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIII-ELL 408
+V+Q + + ++ G ++ S + YG V++R L + + +II+ E++
Sbjct: 782 HVIQKCIECIPQERIQFIISAFYGQVLALSTHPYGCRVIQRVLEHCDDSNTQQIIMDEIM 841
Query: 409 RSPNVSMLLMHPFGNYVIQSALLVSK 434
+S V +L +GNYVIQ L K
Sbjct: 842 QS--VCLLAQDQYGNYVIQHVLEFGK 865
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S++ + L+++ D+ + D+ G +Q +E + ++ ++ EII +A L D +
Sbjct: 648 SNKTRSFELSDIVDHVIEFSMDQYGSRFIQQKLETANVEEKTKIFPEIIPHARTLMTDVF 707
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYV+Q L QL GH + S YG V+++ L EQ T+++ EL
Sbjct: 708 GNYVIQKFFEHGTASQRKELAEQLSGHVLPLSLQMYGCRVIQKALEVVDSEQQTQMVAEL 767
Query: 408 LRSPNVSMLLMHPFGNYVIQ 427
S + + GN+VIQ
Sbjct: 768 DGS--IMKCVRDQNGNHVIQ 785
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LL+ + + S L+ + + + D G IQ ++ + E+ + E+ +
Sbjct: 642 LLDEFKSNKTRSFELSDIVDHVIEFSMDQYGSRFIQQKLETANVEEKTKIFPEIIPHART 701
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ +QR+ L ++ + L L+ YG V+Q L + +
Sbjct: 702 LMTDVFGNYVIQKFFEHGTASQRKELAEQLSGHVLPLSLQMYGCRVIQKALEVVDSEQQT 761
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++ +L+G + ++ G++V+++C +E ++ + II V L HP+G V
Sbjct: 762 QMVAELDGSIMKCVRDQNGNHVIQKC-IECIPQERIQFIISAFYG-QVLALSTHPYGCRV 819
Query: 426 IQSAL 430
IQ L
Sbjct: 820 IQRVL 824
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ ++ EE +++ E++ E +M DPFGN
Sbjct: 873 ISKLAGQIVKMSQQKFASNVVEKCLTFGSPEERQLLVNEILGSTDENEPLQAMMKDPFGN 932
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C + IL + L R H + V KL+
Sbjct: 933 YVVQKVLESCDDHSLELILSRIRVHLNSLKRYTYGKHIVSRVEKLI 978
>gi|225448992|ref|XP_002273503.1| PREDICTED: pumilio homolog 4 [Vitis vinifera]
gi|296085990|emb|CBI31431.3| unnamed protein product [Vitis vinifera]
Length = 1026
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 157/288 (54%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ +++ + DQYG R +Q+ + + +E IF E+I LM D FGNYV+QK
Sbjct: 689 LSDIVDHVIEFSTDQYGSRFIQQKLETATVDEKIKIFPEIIPHSHTLMTDVFGNYVIQKF 748
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E +E QR + LT ++ + L +G R + K LE + +Q +V A L
Sbjct: 749 FEHGTESQRQALASELTG---HILPLSLQMYGCRVIQKALEVVDVDRQTQMV-AELDGSV 804
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ C++ + +++++ ++T GC V+Q +E+ +
Sbjct: 805 MKCVRDQNGNHVIQKCIECVPQDRIQFIISSFYGQVVSLSTHPYGCRVIQRVLEHCDDSS 864
Query: 328 RERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
++++ EI+ + +LA D YGNYV+QH+L P ++++ +L G V S K+ SN
Sbjct: 865 TQQIIMDEIMQSVCILAHDQYGNYVIQHVLQYGKPHERSAIISKLAGQIVKMSQQKFASN 924
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL G E+ ++ E+L S + + +++ PFGNYV+Q +
Sbjct: 925 VVEKCLTFGGPEERQLLVTEMLGSTDENEPLQIMMKDPFGNYVVQKVI 972
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 130/256 (50%), Gaps = 11/256 (4%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
+L G+I+ L+ YGCR +Q+ + + + + E+ V + + D GN+V+QK +E
Sbjct: 763 ELTGHILPLSLQMYGCRVIQKALEVVDVDRQTQMVAELDGSVMKCVRDQNGNHVIQKCIE 822
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
++ RI ++++ Q+V + + +G R + ++LE+ + +++ +
Sbjct: 823 CVPQD---RIQFIISSFYGQVVSLSTHPYGCRVIQRVLEHCDDSSTQQIIMDEIMQSVCI 879
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
L D G+YVIQ+ +++ + +++++A ++ K V++ C+ + +R+
Sbjct: 880 LAHDQYGNYVIQHVLQYGKPHERSAIISKLAGQIVKMSQQKFASNVVEKCLTFGGPEERQ 939
Query: 330 RLVAEIIANA------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
LV E++ + ++ +D +GNYVVQ ++ Q +L +++ H + Y
Sbjct: 940 LLVTEMLGSTDENEPLQIMMKDPFGNYVVQKVIETCDDQTRELILSRIKVHLNTLKRYTY 999
Query: 384 GSNVVERC--LLESGE 397
G ++V R L+ +GE
Sbjct: 1000 GKHIVSRVEKLIATGE 1015
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 106/208 (50%), Gaps = 8/208 (3%)
Query: 230 LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSH 289
++ + +G R + + LE T ++I + + P + TL D G+YVIQ +H +
Sbjct: 696 VIEFSTDQYGSRFIQQKLETATVDEKIK-IFPEIIPHSHTLMTDVFGNYVIQKFFEHGTE 754
Query: 290 EDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGN 349
+ L +E+ + ++ GC V+Q +E ++ ++VAE+ + + D GN
Sbjct: 755 SQRQALASELTGHILPLSLQMYGCRVIQKALEVVDVDRQTQMVAELDGSVMKCVRDQNGN 814
Query: 350 YVVQHLLALRVPQITAS-LLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIII--E 406
+V+Q + VPQ ++ G VS S + YG V++R +LE ++ ST+ II E
Sbjct: 815 HVIQKCIEC-VPQDRIQFIISSFYGQVVSLSTHPYGCRVIQR-VLEHCDDSSTQQIIMDE 872
Query: 407 LLRSPNVSMLLMHPFGNYVIQSALLVSK 434
+++S V +L +GNYVIQ L K
Sbjct: 873 IMQS--VCILAHDQYGNYVIQHVLQYGK 898
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 2/159 (1%)
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
T T + G + + +++ + L+++ D+ +TD+ G +Q +E + ++
Sbjct: 662 TDTSNMEGRFASTLLEEFKNNKTRSFELSDIVDHVIEFSTDQYGSRFIQQKLETATVDEK 721
Query: 329 ERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
++ EII ++ L D +GNYV+Q +L +L GH + S YG V+
Sbjct: 722 IKIFPEIIPHSHTLMTDVFGNYVIQKFFEHGTESQRQALASELTGHILPLSLQMYGCRVI 781
Query: 389 ERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQ 427
++ L ++ T+++ EL S V + GN+VIQ
Sbjct: 782 QKALEVVDVDRQTQMVAELDGS--VMKCVRDQNGNHVIQ 818
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 88/190 (46%), Gaps = 2/190 (1%)
Query: 241 RAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVA 300
R LLE N + S L+ + + + D G IQ ++ + ++ + E+
Sbjct: 670 RFASTLLEEFKNNKTRSFELSDIVDHVIEFSTDQYGSRFIQQKLETATVDEKIKIFPEII 729
Query: 301 DNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRV 360
+ + + TD G V+Q E+ +QR+ L +E+ + L L+ YG V+Q L +
Sbjct: 730 PHSHTLMTDVFGNYVIQKFFEHGTESQRQALASELTGHILPLSLQMYGCRVIQKALEVVD 789
Query: 361 PQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHP 420
++ +L+G + ++ G++V+++C +E + + II VS L HP
Sbjct: 790 VDRQTQMVAELDGSVMKCVRDQNGNHVIQKC-IECVPQDRIQFIISSFYGQVVS-LSTHP 847
Query: 421 FGNYVIQSAL 430
+G VIQ L
Sbjct: 848 YGCRVIQRVL 857
>gi|448107289|ref|XP_004205317.1| Piso0_003560 [Millerozyma farinosa CBS 7064]
gi|448110239|ref|XP_004201581.1| Piso0_003560 [Millerozyma farinosa CBS 7064]
gi|359382372|emb|CCE81209.1| Piso0_003560 [Millerozyma farinosa CBS 7064]
gi|359383137|emb|CCE80444.1| Piso0_003560 [Millerozyma farinosa CBS 7064]
Length = 792
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 164/293 (55%), Gaps = 23/293 (7%)
Query: 155 IVALAKDQYGCRHLQRTMS-------SLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
I+ LAKDQ+GCR LQ+ + + +IF E+ + EL+IDPFGNY++QKL
Sbjct: 276 ILRLAKDQHGCRFLQKKLDENIVTNYQTRVDNFNIIFKEIYPHIYELIIDPFGNYLIQKL 335
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V+ C + + +L +L + L +I +N HG RA+ KL+ +LT Q+SL+ + L P
Sbjct: 336 VDYCGSDDTSLVLEIL---QYNLFQISINQHGTRALQKLISSLTTEYQLSLLTSGLSPYI 392
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
L KD NG++VIQ + + + +++ + + ++ +AT K GCCVLQ C+ + Q
Sbjct: 393 TELIKDLNGNHVIQKILNKYPTQSCQFIYDSIINDLLIVATHKHGCCVLQKCLNHVNNTQ 452
Query: 328 RERLVAEIIANALL--LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN-KYG 384
+ +I+ L D +GNYV+Q+L+++ + +++ + C K+
Sbjct: 453 LNQFSQKILEYETFNKLINDQFGNYVLQYLISINSLCVNSTMYENFITFGIGNLCTLKFS 512
Query: 385 SNVVERCLL-----ESGEEQSTRIIIEL----LRSPNVSMLLMHPFGNYVIQS 428
SNV+E+ L E+ + + + + EL LRS +++ L+ +PFGNYVIQ+
Sbjct: 513 SNVIEKFLKNCYVNETNDVEFSSLKFELTLNILRS-DLNKLINNPFGNYVIQT 564
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 20/228 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKE-EIEMIFVEVIDRVCELMIDPFGNYVVQK 206
L L+ N+ ++ +Q+G R LQ+ +SSL E ++ ++ + + EL+ D GN+V+QK
Sbjct: 348 LEILQYNLFQISINQHGTRALQKLISSLTTEYQLSLLTSGLSPYITELIKDLNGNHVIQK 407
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
++ + I + ND L+ + + HG + K L ++ N Q L
Sbjct: 408 ILNKYPTQSCQFIYDSIIND---LLIVATHKHGCCVLQKCLNHVNNTQLNQFSQKILEYE 464
Query: 267 AVT-LTKDTNGHYVIQY-------CVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQH 318
L D G+YV+QY CV +E+ ++ + + C + L++
Sbjct: 465 TFNKLINDQFGNYVLQYLISINSLCVNSTMYEN--FITFGIGNLCTLKFSSNVIEKFLKN 522
Query: 319 C-VEYSKGAQRERLVAEIIANAL-----LLAEDCYGNYVVQHLLALRV 360
C V + + L E+ N L L + +GNYV+Q L+ + +
Sbjct: 523 CYVNETNDVEFSSLKFELTLNILRSDLNKLINNPFGNYVIQTLIDILI 570
>gi|48716356|dbj|BAD22967.1| pumilio-like [Oryza sativa Japonica Group]
gi|125541647|gb|EAY88042.1| hypothetical protein OsI_09469 [Oryza sativa Indica Group]
gi|125584167|gb|EAZ25098.1| hypothetical protein OsJ_08892 [Oryza sativa Japonica Group]
Length = 1001
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 169/332 (50%), Gaps = 17/332 (5%)
Query: 112 LRSNGNELSSVPRNQWMSSLSLKRNQW---LQDSFDCSSLR-----DLRGNIVALAKDQY 163
+ S G + P W S L N + L + F + R D+ G++V + DQY
Sbjct: 621 ISSVGKTTTGGPMGSWNSDNGLIDNGYGSSLLEEFKTNKTRSFELLDIVGHVVEFSSDQY 680
Query: 164 GCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLML 223
G R +Q+ + + EE + IF E++ + LM D FGNYV+QK E +E Q+ ++ +L
Sbjct: 681 GSRFIQQKLETASAEEKDTIFPEILPQARTLMTDVFGNYVIQKFFEYGTEPQKKQLASLL 740
Query: 224 TNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYC 283
QL L +G R + K LE + QQ + L L + +D NG++VIQ C
Sbjct: 741 KGYVLQL---SLQMYGCRVIQKALEMVEVEQQTQMAL-ELDGNIMKCVRDQNGNHVIQKC 796
Query: 284 VKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER-LVAEIIANALLL 342
++ E +++++ + ++T GC V+Q +E+ + ++ EI+ + +LL
Sbjct: 797 IECIPQERIRFIISAFYGHVVELSTHPYGCRVIQRVLEHCNDENTQSTMMEEIMQSVVLL 856
Query: 343 AEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTR 402
D YGNYV+QH+L P +++++QL G V S K+ SNVVE+CL E+
Sbjct: 857 TLDQYGNYVIQHVLQHGKPDERSAIIKQLAGQIVKMSQQKFASNVVEKCLSFGSPEERQI 916
Query: 403 IIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
+I E+L + + + ++ F NYV+Q L
Sbjct: 917 LINEMLGTTDENEPLQAMMKDQFANYVVQKVL 948
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
++ L G IV +++ ++ +++ +S EE +++ E++ E +M D F N
Sbjct: 882 IKQLAGQIVKMSQQKFASNVVEKCLSFGSPEERQILINEMLGTTDENEPLQAMMKDQFAN 941
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++ R IL + L R H + V KL+
Sbjct: 942 YVVQKVLETCDDQNRELILSRIKVHLNALKRYTYGKHIVARVEKLI 987
>gi|391327709|ref|XP_003738339.1| PREDICTED: pumilio homolog 1-like [Metaseiulus occidentalis]
Length = 374
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 164/301 (54%), Gaps = 15/301 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL G+++ A+DQ G R +Q + S E +MIF E+ V LM FGNYVVQKL
Sbjct: 31 LRDLCGHVIEFAQDQQGSRFIQHKLESATPSEKQMIFNEIFTWVYSLMTHEFGNYVVQKL 90
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+ SEEQ+ + +T +V + ++ +G R + K L +L + L+ LR
Sbjct: 91 FDFGSEEQKLALAGKMTG---HIVNLTMHIYGCRVMQKALVSLPTEVRKKLI-DELRNHV 146
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V D NG++V+Q C + +++++E + + C V+Q +EY K Q
Sbjct: 147 VQCANDENGNHVMQKCFETIEPGYLQFIVDECIGKVRQLCSHSYACRVIQRLLEYCKFEQ 206
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ EI AN L LA+D YGNYV+Q++L +P+ +++++ + G+ V+ SC+KY SNV
Sbjct: 207 SIPILQEIHANTLELAQDQYGNYVIQYILQHGLPKDKSAIIQAIRGNVVALSCHKYASNV 266
Query: 388 VERCLLESGEEQSTRIIIELLRSPN-VSMLLMHPFGNYVIQ----------SALLVSKVR 436
+E+C+ + T ++ E+ + + + ++ PF NYV+Q S LLV K+
Sbjct: 267 MEKCVTHGSSLERTVLMEEVCATKDGIFKMMKDPFANYVVQRMVEVADAHYSKLLVQKIA 326
Query: 437 L 437
L
Sbjct: 327 L 327
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 83/186 (44%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
KL++ + + L L L + +D G IQ+ ++ + + + + NE+ Y
Sbjct: 16 KLIKEFKSNRYPDLELRDLCGHVIEFAQDQQGSRFIQHKLESATPSEKQMIFNEIFTWVY 75
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ T + G V+Q ++ Q+ L ++ + + L YG V+Q L ++
Sbjct: 76 SLMTHEFGNYVVQKLFDFGSEEQKLALAGKMTGHIVNLTMHIYGCRVMQKALVSLPTEVR 135
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
L+ +L H V + ++ G++V+++C E+ E + I++ V L H +
Sbjct: 136 KKLIDELRNHVVQCANDENGNHVMQKC-FETIEPGYLQFIVDECIG-KVRQLCSHSYACR 193
Query: 425 VIQSAL 430
VIQ L
Sbjct: 194 VIQRLL 199
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI---DRVCELMIDPFGNYVV 204
++ +RGN+VAL+ +Y +++ ++ E ++ EV D + ++M DPF NYVV
Sbjct: 247 IQAIRGNVVALSCHKYASNVMEKCVTHGSSLERTVLMEEVCATKDGIFKMMKDPFANYVV 306
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
Q++VE+ ++ + + QL + H + + K L
Sbjct: 307 QRMVEVADAHYSKLLVQKIALNKEQLQKSTSGKHALAKLEKYL 349
>gi|359486781|ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
Length = 1015
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 161/300 (53%), Gaps = 9/300 (3%)
Query: 136 NQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELM 195
+++ + C L ++ G++V + DQYG R +Q+ + + EE +M+F E++ + LM
Sbjct: 666 DEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKDMVFHEIMPQALSLM 725
Query: 196 IDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ 255
D FGNYV+QK E + Q + LT ++ + L +G R + K +E + QQ
Sbjct: 726 TDVFGNYVIQKFFEHGTASQIRELADQLTG---HVLTLSLQMYGCRVIQKAIEVVDLDQQ 782
Query: 256 ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCV 315
+V+ L + +D NG++VIQ C++ + +++++ D ++T GC V
Sbjct: 783 TKMVME-LDGNVMRCVRDQNGNHVIQKCIECIPQDSIQFIISTFYDQVVTLSTHPYGCRV 841
Query: 316 LQHCVEYSKGAQRERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGH 374
+Q +E+ + +R++ EI+ + +LA+D YGNYVVQH+L P +S++ +L G
Sbjct: 842 IQRVLEHCHDPKTQRIMMDEILQSVRMLAQDQYGNYVVQHVLEHGKPHERSSIINELAGQ 901
Query: 375 YVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
V S K+ SNVVE+CL + ++ E+L S + + ++ F NYV+Q L
Sbjct: 902 IVQMSQQKFASNVVEKCLTFGAPSERQILVNEMLGSTDENEPLQAMMKDQFANYVVQKVL 961
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 84/188 (44%), Gaps = 2/188 (1%)
Query: 243 VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADN 302
V LL+ + + L+ + V + D G IQ ++ + E+ + +E+
Sbjct: 661 VSSLLDEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKDMVFHEIMPQ 720
Query: 303 CYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ 362
+ TD G V+Q E+ +Q L ++ + L L+ YG V+Q + +
Sbjct: 721 ALSLMTDVFGNYVIQKFFEHGTASQIRELADQLTGHVLTLSLQMYGCRVIQKAIEVVDLD 780
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFG 422
++ +L+G+ + ++ G++V+++C +E + S + II V L HP+G
Sbjct: 781 QQTKMVMELDGNVMRCVRDQNGNHVIQKC-IECIPQDSIQFIISTFYD-QVVTLSTHPYG 838
Query: 423 NYVIQSAL 430
VIQ L
Sbjct: 839 CRVIQRVL 846
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDP 198
S + +L G IV +++ ++ +++ ++ E +++ E++ E +M D
Sbjct: 892 SSIINELAGQIVQMSQQKFASNVVEKCLTFGAPSERQILVNEMLGSTDENEPLQAMMKDQ 951
Query: 199 FGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
F NYVVQK++E C ++Q IL + L + H + V KL+
Sbjct: 952 FANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLV 1000
>gi|256090645|ref|XP_002581294.1| pumilio [Schistosoma mansoni]
gi|353230661|emb|CCD77078.1| putative pumilio [Schistosoma mansoni]
Length = 1537
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 160/295 (54%), Gaps = 9/295 (3%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
C +L DL +IV A+DQYG R +Q+ + + +F E++ LMID FGNYV+
Sbjct: 962 CLTLHDLMNHIVEFAQDQYGSRFIQQKLEQASVVDKTSVFREILPHAYNLMIDVFGNYVI 1021
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK EL + EQ+ + + Q++ + L +G R + K +E++ QIS+V L
Sbjct: 1022 QKFFELGTPEQKQILAQRIRG---QVLSLSLQMYGCRVIQKAVESVPLEMQISIV-KELD 1077
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+ KD NG++V+Q CV++ E +++++ D+ Y I+T GC V+Q +E+
Sbjct: 1078 GCVIKCVKDQNGNHVVQKCVENVPPEHLQFIVDAFKDHVYSISTHSYGCRVIQRILEHCT 1137
Query: 325 GAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
Q +++E+ + L +D YGNYV+QH+L + + ++ ++G S +K+
Sbjct: 1138 PEQTTPILSELHQHTDALVKDQYGNYVIQHVLEHGKTEDKSRIVEHIKGRVAKLSVHKFA 1197
Query: 385 SNVVERCLLESGEEQSTRIIIELL-----RSPNVSMLLMHPFGNYVIQSALLVSK 434
SNVVE+ + + + +I E+L RS + M++ F NYVIQ L V++
Sbjct: 1198 SNVVEKAVANASRVERQSLINEILEETVTRSSVLVMMMKDQFANYVIQKMLDVAE 1252
>gi|302855378|ref|XP_002959184.1| hypothetical protein VOLCADRAFT_70487 [Volvox carteri f.
nagariensis]
gi|300255440|gb|EFJ39746.1| hypothetical protein VOLCADRAFT_70487 [Volvox carteri f.
nagariensis]
Length = 409
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 159/298 (53%), Gaps = 17/298 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRD+ G+ + DQ G R +Q SL EEI+ F +V+ + +LM D FGNYVVQK
Sbjct: 74 LRDILGHFYEFSLDQDGSRFVQENFESLRPEEIDAAFNDVLPHLLQLMTDMFGNYVVQKF 133
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E + E R RI + + ++ + L G R + K LE T QQ+ +V + L
Sbjct: 134 LEHGTPEHRARIANAIQGN---VLSLSLQLFGCRTMQKALEVFTEDQQVDIV-SELNGHV 189
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ D NG +VIQ C+++ + LL+ + ++T GC +++H ++Y + +
Sbjct: 190 MRCVCDQNGSHVIQKCIEYVPPHHSAGLLDNIVTCVVPLSTHLHGCRIIRHILKYVRDQR 249
Query: 328 RERLV-AEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
R V A+I+ A+ LA+D YGNYV+QH+L P+ +S++R L V S +K+ SN
Sbjct: 250 RRAAVMADILGAAVQLAQDQYGNYVIQHVLERGTPEEKSSIIRSLSATVVQLSMHKFASN 309
Query: 387 VVERCLLESGE------------EQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLV 432
V+E+CL+ Q+ +I +E S V ++ +PFGNYV+Q L V
Sbjct: 310 VIEKCLIHGSTADRDLIINRMLGAQTLQIQLETGYSDPVQGMMRNPFGNYVVQKVLEV 367
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 124/264 (46%), Gaps = 23/264 (8%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++GN+++L+ +GCR +Q+ + +++ I E+ V + D G++V+QK +E
Sbjct: 149 IQGNVLSLSLQLFGCRTMQKALEVFTEDQQVDIVSELNGHVMRCVCDQNGSHVIQKCIEY 208
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
+L D+ + L+TH G R + +L+ + + ++ + V+A + AV
Sbjct: 209 VPPHHSAGLL-----DNIVTCVVPLSTHLHGCRIIRHILKYVRDQRRRAAVMADILGAAV 263
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++ + E+ ++ ++ ++ K V++ C+ + A R
Sbjct: 264 QLAQDQYGNYVIQHVLERGTPEEKSSIIRSLSATVVQLSMHKFASNVIEKCLIHGSTADR 323
Query: 329 ERLVAEIIANALL--------------LAEDCYGNYVVQHLLALRVPQITASLLRQLEGH 374
+ ++ ++ L + + +GNYVVQ +L + + ++L ++
Sbjct: 324 DLIINRMLGAQTLQIQLETGYSDPVQGMMRNPFGNYVVQKVLEVCTDEQREAMLARVRMQ 383
Query: 375 YVSFSCNKYGSNVVERC--LLESG 396
Y +VV R LL +G
Sbjct: 384 LHELKHFHYSRHVVARVENLLSAG 407
>gi|256090643|ref|XP_002581293.1| pumilio [Schistosoma mansoni]
gi|353230662|emb|CCD77079.1| putative pumilio [Schistosoma mansoni]
Length = 1534
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 160/295 (54%), Gaps = 9/295 (3%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
C +L DL +IV A+DQYG R +Q+ + + +F E++ LMID FGNYV+
Sbjct: 959 CLTLHDLMNHIVEFAQDQYGSRFIQQKLEQASVVDKTSVFREILPHAYNLMIDVFGNYVI 1018
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK EL + EQ+ + + Q++ + L +G R + K +E++ QIS+V L
Sbjct: 1019 QKFFELGTPEQKQILAQRIRG---QVLSLSLQMYGCRVIQKAVESVPLEMQISIV-KELD 1074
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+ KD NG++V+Q CV++ E +++++ D+ Y I+T GC V+Q +E+
Sbjct: 1075 GCVIKCVKDQNGNHVVQKCVENVPPEHLQFIVDAFKDHVYSISTHSYGCRVIQRILEHCT 1134
Query: 325 GAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
Q +++E+ + L +D YGNYV+QH+L + + ++ ++G S +K+
Sbjct: 1135 PEQTTPILSELHQHTDALVKDQYGNYVIQHVLEHGKTEDKSRIVEHIKGRVAKLSVHKFA 1194
Query: 385 SNVVERCLLESGEEQSTRIIIELL-----RSPNVSMLLMHPFGNYVIQSALLVSK 434
SNVVE+ + + + +I E+L RS + M++ F NYVIQ L V++
Sbjct: 1195 SNVVEKAVANASRVERQSLINEILEETVTRSSVLVMMMKDQFANYVIQKMLDVAE 1249
>gi|296086206|emb|CBI31647.3| unnamed protein product [Vitis vinifera]
Length = 874
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 161/300 (53%), Gaps = 9/300 (3%)
Query: 136 NQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELM 195
+++ + C L ++ G++V + DQYG R +Q+ + + EE +M+F E++ + LM
Sbjct: 525 DEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKDMVFHEIMPQALSLM 584
Query: 196 IDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ 255
D FGNYV+QK E + Q + LT ++ + L +G R + K +E + QQ
Sbjct: 585 TDVFGNYVIQKFFEHGTASQIRELADQLTG---HVLTLSLQMYGCRVIQKAIEVVDLDQQ 641
Query: 256 ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCV 315
+V+ L + +D NG++VIQ C++ + +++++ D ++T GC V
Sbjct: 642 TKMVME-LDGNVMRCVRDQNGNHVIQKCIECIPQDSIQFIISTFYDQVVTLSTHPYGCRV 700
Query: 316 LQHCVEYSKGAQRERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGH 374
+Q +E+ + +R++ EI+ + +LA+D YGNYVVQH+L P +S++ +L G
Sbjct: 701 IQRVLEHCHDPKTQRIMMDEILQSVRMLAQDQYGNYVVQHVLEHGKPHERSSIINELAGQ 760
Query: 375 YVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
V S K+ SNVVE+CL + ++ E+L S + + ++ F NYV+Q L
Sbjct: 761 IVQMSQQKFASNVVEKCLTFGAPSERQILVNEMLGSTDENEPLQAMMKDQFANYVVQKVL 820
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 84/188 (44%), Gaps = 2/188 (1%)
Query: 243 VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADN 302
V LL+ + + L+ + V + D G IQ ++ + E+ + +E+
Sbjct: 520 VSSLLDEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKDMVFHEIMPQ 579
Query: 303 CYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ 362
+ TD G V+Q E+ +Q L ++ + L L+ YG V+Q + +
Sbjct: 580 ALSLMTDVFGNYVIQKFFEHGTASQIRELADQLTGHVLTLSLQMYGCRVIQKAIEVVDLD 639
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFG 422
++ +L+G+ + ++ G++V+++C +E + S + II V L HP+G
Sbjct: 640 QQTKMVMELDGNVMRCVRDQNGNHVIQKC-IECIPQDSIQFIISTFYD-QVVTLSTHPYG 697
Query: 423 NYVIQSAL 430
VIQ L
Sbjct: 698 CRVIQRVL 705
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPF 199
S + +L G IV +++ ++ +++ ++ E +++ E++ E +M D F
Sbjct: 752 SIINELAGQIVQMSQQKFASNVVEKCLTFGAPSERQILVNEMLGSTDENEPLQAMMKDQF 811
Query: 200 GNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
NYVVQK++E C ++Q IL + L + H + V KL+
Sbjct: 812 ANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLV 859
>gi|320166165|gb|EFW43064.1| pumilio [Capsaspora owczarzaki ATCC 30864]
Length = 1003
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 168/318 (52%), Gaps = 18/318 (5%)
Query: 123 PRNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEM 182
PR++ + RN L D +L L+ ++V A DQ+G R +Q+ + + + E +
Sbjct: 514 PRSKLLEEF---RNSRLPDL----TLTQLKDHVVEFASDQHGSRCIQQRLETATEREKNL 566
Query: 183 IFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRA 242
+F E++ LM D FGNYV+QKL E + R + L + ++R+ L +G R
Sbjct: 567 VFDEILPHALHLMTDVFGNYVIQKLFEHGTAAHRLELARRL---EGHILRLSLQMYGCRV 623
Query: 243 VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADN 302
+ K +E++ PQQ++LV L + KD NG++V+Q C++ +++++
Sbjct: 624 IQKAVESIPEPQQVALVRE-LEGSVIMCVKDQNGNHVVQKCIEQVPAMHLQFVVDSFRGL 682
Query: 303 CYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ 362
++T GC V+Q +E+ Q ++ E++ N L +D YGNYV+QH+L +
Sbjct: 683 VPSLSTHPYGCRVIQRILEHCTPTQVMSMLQEVLGNCSRLIQDQYGNYVIQHVLEHGPQE 742
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL-----RSPNVSMLL 417
A +L + G V S +K+ SNVVE+C++ S + + +I E+L SP ++L
Sbjct: 743 AKAIVLDAMRGRIVPLSQHKFASNVVEKCIVHSADLERVALINEILVQSDPGSPTSALLA 802
Query: 418 M--HPFGNYVIQSALLVS 433
M PF NYV+Q L V+
Sbjct: 803 MMRDPFANYVVQKMLDVA 820
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 4/193 (2%)
Query: 239 GIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNE 298
G++ KLLE N + L L L+ V D +G IQ ++ + + + +E
Sbjct: 511 GMQPRSKLLEEFRNSRLPDLTLTQLKDHVVEFASDQHGSRCIQQRLETATEREKNLVFDE 570
Query: 299 VADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLL-A 357
+ + + TD G V+Q E+ A R L + + L L+ YG V+Q + +
Sbjct: 571 ILPHALHLMTDVFGNYVIQKLFEHGTAAHRLELARRLEGHILRLSLQMYGCRVIQKAVES 630
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLL 417
+ PQ A L+R+LEG + ++ G++VV++C +E + +++ R V L
Sbjct: 631 IPEPQQVA-LVRELEGSVIMCVKDQNGNHVVQKC-IEQVPAMHLQFVVDSFRG-LVPSLS 687
Query: 418 MHPFGNYVIQSAL 430
HP+G VIQ L
Sbjct: 688 THPYGCRVIQRIL 700
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI---------DRVCELMIDP 198
L +RG IV L++ ++ +++ + E + E++ + +M DP
Sbjct: 748 LDAMRGRIVPLSQHKFASNVVEKCIVHSADLERVALINEILVQSDPGSPTSALLAMMRDP 807
Query: 199 FGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLK 245
F NYVVQK++++ E+QR +++ + + L + H I V K
Sbjct: 808 FANYVVQKMLDVACEDQRNQLIARIRPNILSLRKYTYGKHIIAKVEK 854
>gi|340056635|emb|CCC50971.1| RNA-binding regulatory protein (fragment) [Trypanosoma vivax Y486]
Length = 540
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 149/286 (52%), Gaps = 28/286 (9%)
Query: 151 LRGNIVALAKDQYGCRHLQRTM--SSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
LRG + AKDQ+GCRHLQR + S E +I E++ V ELM D + N++VQKL
Sbjct: 195 LRGAVYETAKDQHGCRHLQRLLGDSDGNSEVARVIMNEIVPHVAELMTDQYANFLVQKLF 254
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
++ + R ++ + ++ I L HG +V K++E ++ +++ ++ AL V
Sbjct: 255 DIMPPDVRYKVAYVAAP---KIADIALTPHGTFSVQKMIETISTREEMEIIREALSRDVV 311
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L KD NG++ IQ ++ F HED +++ V +C IA +K GCCVLQ C+EY+ QR
Sbjct: 312 RLVKDANGNHAIQKVLQRFDHEDKEFIYAAVGADCVPIAKNKQGCCVLQRCLEYASPTQR 371
Query: 329 ERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
LV I+ L +AED YGNYV+Q++L S N + +
Sbjct: 372 STLVKHILDCCLQIAEDPYGNYVLQYVLQ---------------------SGNNTTIDTI 410
Query: 389 ERCLLESGEEQSTRIIIELLRSPNVSM-LLMHPFGNYVIQSALLVS 433
L + +E + +P V+ L+ FGNYV+Q+AL S
Sbjct: 411 AIAFLPH-LPLVREMYVETMCTPEVAARLIQDDFGNYVLQTALTRS 455
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 275 NGHYVIQYCVKHFSHEDTKYLLNEVADNC-----YGIATDKSGCCVLQHCVEYSKG-AQR 328
NG Y V+ +S+ + N V+ C Y A D+ GC LQ + S G ++
Sbjct: 171 NGVYHPHVAVRPYSN-----VANGVSAECLRGAVYETAKDQHGCRHLQRLLGDSDGNSEV 225
Query: 329 ERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R++ EI+ + L D Y N++VQ L + P + + + +G+
Sbjct: 226 ARVIMNEIVPHVAELMTDQYANFLVQKLFDIMPPDVRYKVAYVAAPKIADIALTPHGTFS 285
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLMHPFGNYVIQSAL 430
V++ + E STR +E++R S +V L+ GN+ IQ L
Sbjct: 286 VQKMI----ETISTREEMEIIREALSRDVVRLVKDANGNHAIQKVL 327
>gi|356550736|ref|XP_003543740.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 6,
chloroplastic-like [Glycine max]
Length = 952
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 164/306 (53%), Gaps = 21/306 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G+IV + DQ+G R +Q+ + S EE E++F EV+ +LM D FGNYV+QK
Sbjct: 621 LSDIIGHIVEFSTDQHGSRFIQQKLESCGVEEKELVFKEVLPHTSKLMTDVFGNYVIQKF 680
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQR + L Q++ + L +G R + K LE + Q+ LV L
Sbjct: 681 FEYGSPEQRKELANRLLG---QILPLSLQMYGCRVIQKALEVIDLEQKAQLV-HELDGNV 736
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGA 326
+ +D NG++VIQ C++ ++ ++++ ++ GC V+Q +E+ S
Sbjct: 737 MRCVRDQNGNHVIQKCIESIPTKNIDFIISAFRGQIALLSMHPYGCRVIQRVLEHCSNEV 796
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q + +V EI+ + LA+D YGNYV QH+L PQ + ++ +L GH S +K+ SN
Sbjct: 797 QCQFIVDEILESVFTLAQDQYGNYVTQHVLERGKPQERSQIIHKLSGHIFQLSQHKFASN 856
Query: 387 VVERCLLESGEEQSTRIIIELL-----RSPNVSMLLMHPFGNYVIQS----------ALL 431
VVE+C LE G+ +++I + ++ N+ ++ F NYVIQ A L
Sbjct: 857 VVEKC-LEYGDATDRQLLIAEIVGHDKQNDNLLTMMKDQFANYVIQKVFEICSENQRATL 915
Query: 432 VSKVRL 437
+S++RL
Sbjct: 916 LSRIRL 921
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LE L + + L+ + V + D +G IQ ++ E+ + + EV +
Sbjct: 607 FLEELKSGKGRRFELSDIIGHIVEFSTDQHGSRFIQQKLESCGVEEKELVFKEVLPHTSK 666
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q EY QR+ L ++ L L+ YG V+Q L + + A
Sbjct: 667 LMTDVFGNYVIQKFFEYGSPEQRKELANRLLGQILPLSLQMYGCRVIQKALEVIDLEQKA 726
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
L+ +L+G+ + ++ G++V+++C +ES ++ II R +++L MHP+G V
Sbjct: 727 QLVHELDGNVMRCVRDQNGNHVIQKC-IESIPTKNIDFIISAFRG-QIALLSMHPYGCRV 784
Query: 426 IQSAL 430
IQ L
Sbjct: 785 IQRVL 789
>gi|357449403|ref|XP_003594978.1| Pumilio-like protein [Medicago truncatula]
gi|355484026|gb|AES65229.1| Pumilio-like protein [Medicago truncatula]
Length = 984
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 160/301 (53%), Gaps = 13/301 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G+IV + DQ+G R +Q+ + S EE ++F EV+ +LM D FGNYV+QK
Sbjct: 654 LSDIIGHIVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASKLMTDVFGNYVIQKF 713
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQR + L Q++ + L +G R + K LE + + Q+ LV L
Sbjct: 714 FEYGNPEQRKELAEKLAG---QILPLSLQMYGCRVIQKALEVIEHEQKAQLVRE-LDGNI 769
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGA 326
+ +D NG++VIQ C++ ++L+ ++ GC V+Q +E+ +
Sbjct: 770 MRCVRDQNGNHVIQKCIESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQRILEHCTDEV 829
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q + +V EI+ + LA+D YGNYV QH+L PQ + ++ +L GH V S +K+ SN
Sbjct: 830 QCQFIVDEILESVCSLAQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQLSQHKFASN 889
Query: 387 VVERCLLESGEEQSTRIIIELL----RSPNVSMLLMHPFGNYVIQSALLV----SKVRLF 438
VVE+CL + +I+E++ ++ N+ ++ F NYVIQ + + + RL
Sbjct: 890 VVEKCLEYGDASEREVLIVEIIAHDEQNDNLLTMMKDQFANYVIQKVIDICSENQRARLL 949
Query: 439 S 439
S
Sbjct: 950 S 950
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 129/256 (50%), Gaps = 9/256 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G I+ L+ YGCR +Q+ + + E+ + E+ + + D GN+V+QK +E
Sbjct: 729 LAGQILPLSLQMYGCRVIQKALEVIEHEQKAQLVRELDGNIMRCVRDQNGNHVIQKCIES 788
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+I +L+ Q+ + ++ +G R + ++LE+ T+ Q ++ + +L
Sbjct: 789 IP---TNKIGFILSAFRGQVANLSMHPYGCRVIQRILEHCTDEVQCQFIVDEILESVCSL 845
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YV Q+ ++ ++ ++++++ + ++ K V++ C+EY ++RE
Sbjct: 846 AQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQLSQHKFASNVVEKCLEYGDASEREV 905
Query: 331 LVAEIIA------NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ EIIA N L + +D + NYV+Q ++ + A LL + H + YG
Sbjct: 906 LIVEIIAHDEQNDNLLTMMKDQFANYVIQKVIDICSENQRARLLSHIRAHANALKKYTYG 965
Query: 385 SNVVERCLLESGEEQS 400
++V R + GE Q+
Sbjct: 966 KHIVARMEHQFGENQA 981
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 2/188 (1%)
Query: 243 VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADN 302
++ LE L + + L+ + V + D +G IQ ++ E+ + EV +
Sbjct: 637 IVNFLEELKSGKGRRFELSDIIGHIVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPH 696
Query: 303 CYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ 362
+ TD G V+Q EY QR+ L ++ L L+ YG V+Q L + +
Sbjct: 697 ASKLMTDVFGNYVIQKFFEYGNPEQRKELAEKLAGQILPLSLQMYGCRVIQKALEVIEHE 756
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFG 422
A L+R+L+G+ + ++ G++V+++C +ES I+ R V+ L MHP+G
Sbjct: 757 QKAQLVRELDGNIMRCVRDQNGNHVIQKC-IESIPTNKIGFILSAFRG-QVANLSMHPYG 814
Query: 423 NYVIQSAL 430
VIQ L
Sbjct: 815 CRVIQRIL 822
>gi|413924047|gb|AFW63979.1| hypothetical protein ZEAMMB73_492361 [Zea mays]
Length = 1002
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 171/338 (50%), Gaps = 27/338 (7%)
Query: 116 GNELSSVP---RN-------QWMSSLSLKRNQW---LQDSFDCSSLR-----DLRGNIVA 157
GN L+ +P RN W S L N + L + F + R D+ G++V
Sbjct: 617 GNRLTRLPAVVRNTAGGSMGSWNSENGLMDNGYGSSLLEEFKSNKTRSFELLDIVGHVVE 676
Query: 158 LAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRT 217
+ DQYG R +Q+ + + E+ MIF E++ + LM D FGNYV+QK E +E Q
Sbjct: 677 FSSDQYGSRFIQQKLETASTEQKNMIFPEILPQARTLMTDVFGNYVIQKFFEYGTETQTK 736
Query: 218 RILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGH 277
++ +L QL L +G R + K LE + QQ + L L + +D NG+
Sbjct: 737 QLATLLKGFVLQL---SLQMYGCRVIQKALEVVEVEQQTQMALE-LDGSIMRCVRDQNGN 792
Query: 278 YVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGAQRERLVAEII 336
+VIQ C++ E +++++ + ++ GC V+Q +E+ + + ++ EI+
Sbjct: 793 HVIQKCIECIPQERIRFIISAFYGHVVELSMHPYGCRVIQRILEHCDDESTQNAMMEEIM 852
Query: 337 ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESG 396
+ + L ED YGNYV+QH+L P+ ++++ QL G V S K+ SNVVE+CL
Sbjct: 853 QSVVTLTEDQYGNYVIQHVLQYGKPEERSTIIAQLAGQIVKMSQQKFASNVVEKCLTFGS 912
Query: 397 EEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
EQ +I E+L + + + ++ F NYV+Q L
Sbjct: 913 PEQRQILINEMLGTTDENEPLQAMMKDQFANYVVQKVL 950
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 130/255 (50%), Gaps = 11/255 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L+G ++ L+ YGCR +Q+ + + E+ + +E+ + + D GN+V+QK +E
Sbjct: 742 LKGFVLQLSLQMYGCRVIQKALEVVEVEQQTQMALELDGSIMRCVRDQNGNHVIQKCIEC 801
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+E RI +++ +V + ++ +G R + ++LE+ + + ++ + VTL
Sbjct: 802 IPQE---RIRFIISAFYGHVVELSMHPYGCRVIQRILEHCDDESTQNAMMEEIMQSVVTL 858
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
T+D G+YVIQ+ +++ E+ ++ ++A ++ K V++ C+ + QR+
Sbjct: 859 TEDQYGNYVIQHVLQYGKPEERSTIIAQLAGQIVKMSQQKFASNVVEKCLTFGSPEQRQI 918
Query: 331 LVAEIIANA------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E++ + +D + NYVVQ +L Q +L +++ H + YG
Sbjct: 919 LINEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQNRELILSRIKVHLNALKRYTYG 978
Query: 385 SNVVERC--LLESGE 397
++V R L+ +GE
Sbjct: 979 KHIVTRVEKLIAAGE 993
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 119/243 (48%), Gaps = 12/243 (4%)
Query: 194 LMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNP 253
LM + +G+ +++ E S + R+ LL + +V + +G R + + LE +
Sbjct: 644 LMDNGYGSSLLE---EFKSNKTRSFELLDIVG---HVVEFSSDQYGSRFIQQKLETAST- 696
Query: 254 QQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGC 313
+Q +++ + P A TL D G+YVIQ ++ + TK L + ++ GC
Sbjct: 697 EQKNMIFPEILPQARTLMTDVFGNYVIQKFFEYGTETQTKQLATLLKGFVLQLSLQMYGC 756
Query: 314 CVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEG 373
V+Q +E + Q+ ++ E+ + + D GN+V+Q + + ++ G
Sbjct: 757 RVIQKALEVVEVEQQTQMALELDGSIMRCVRDQNGNHVIQKCIECIPQERIRFIISAFYG 816
Query: 374 HYVSFSCNKYGSNVVERCLLESGEEQSTR--IIIELLRSPNVSMLLMHPFGNYVIQSALL 431
H V S + YG V++R +LE +++ST+ ++ E+++S V L +GNYVIQ L
Sbjct: 817 HVVELSMHPYGCRVIQR-ILEHCDDESTQNAMMEEIMQS--VVTLTEDQYGNYVIQHVLQ 873
Query: 432 VSK 434
K
Sbjct: 874 YGK 876
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ ++ E+ +++ E++ E +M D F N
Sbjct: 884 IAQLAGQIVKMSQQKFASNVVEKCLTFGSPEQRQILINEMLGTTDENEPLQAMMKDQFAN 943
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++ R IL + L R H + V KL+
Sbjct: 944 YVVQKVLETCDDQNRELILSRIKVHLNALKRYTYGKHIVTRVEKLI 989
>gi|357472855|ref|XP_003606712.1| Pumilio-like protein [Medicago truncatula]
gi|355507767|gb|AES88909.1| Pumilio-like protein [Medicago truncatula]
Length = 1025
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 157/291 (53%), Gaps = 9/291 (3%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
C L ++ G++V + DQYG R +Q+ + + EE M++ E++ LM D FGNYVV
Sbjct: 685 CFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVV 744
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK E QR + L ++ + L +G R + K +E + Q+I +V L
Sbjct: 745 QKFFEHGLAPQRRELANKLIG---HVLTLSLQMYGCRVIQKAIEVVDLDQKIEMV-KELD 800
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+ +D NG++VIQ C++ E ++++ D ++T GC V+Q +E+ +
Sbjct: 801 GNIMRCVRDQNGNHVIQKCIECVPEEAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCE 860
Query: 325 G-AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
A +++++ EI+ +LA+D YGNYVVQH+L P ++++++L G V S K+
Sbjct: 861 SPATQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGKIVQMSQQKF 920
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
SNVVE+CL SG + ++ E+L + + + ++ F NYV+Q L
Sbjct: 921 ASNVVEKCLTFSGPAERQILVSEMLGTTDENEPLQAMMKDQFANYVVQKVL 971
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE + + L+ + V + D G IQ ++ + E+ + E+ +
Sbjct: 674 LLEEFKSNKAKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALA 733
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ QR L ++I + L L+ YG V+Q + +
Sbjct: 734 LMTDVFGNYVVQKFFEHGLAPQRRELANKLIGHVLTLSLQMYGCRVIQKAIEVVDLDQKI 793
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++++L+G+ + ++ G++V+++C +E E++ I+ V L HP+G V
Sbjct: 794 EMVKELDGNIMRCVRDQNGNHVIQKC-IECVPEEAIDFIVSTFFD-QVVTLSTHPYGCRV 851
Query: 426 IQSAL 430
IQ L
Sbjct: 852 IQRVL 856
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L G IV +++ ++ +++ ++ E +++ E++ E +M D F N
Sbjct: 905 IKELAGKIVQMSQQKFASNVVEKCLTFSGPAERQILVSEMLGTTDENEPLQAMMKDQFAN 964
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C + QR IL + L + H + V KL+
Sbjct: 965 YVVQKVLETCDDHQRELILSRIKVHLNALKKYTYGKHIVARVEKLV 1010
>gi|385304539|gb|EIF48553.1| protein of the mitochondrial outer surface [Dekkera bruxellensis
AWRI1499]
Length = 419
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 165/312 (52%), Gaps = 25/312 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+ +KDQ+G R +Q+ ++ E+ EMIF E+ + +LM D FGNYV+QK
Sbjct: 83 LKDILGHAYEFSKDQHGSRFIQQQLADASAEDKEMIFNEIRNYSIDLMTDVFGNYVIQKY 142
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E +E Q +IL +F + + +G R V K +++++ ++ +V L+P
Sbjct: 143 FEYGNETQ-IKILFESMKGNFNF--LSMQMYGCRVVQKCMDSVSLDDRLQVV-DELKPNI 198
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ L KD NG++VIQ ++ T ++L + Y ++T GC V+Q +EYS
Sbjct: 199 LNLVKDQNGNHVIQKVIESIPTSRTPFILESLKHQIYHLSTHPYGCRVIQRLLEYSDEED 258
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R ++ E+ L +D +GNYV+QH++ Q T +L+ + + V+ S +K+ SN
Sbjct: 259 RAYILGELKGFIYYLVQDQFGNYVIQHIIEHGSEQYTEQILQIVIDNLVNLSKHKFASNA 318
Query: 388 VERCLLESGEEQSTRIIIELLR------SP-----NVSMLLMHPFGNYVIQS-------- 428
VE+C++ E R+ LL SP ++S+++ PF NYV+Q
Sbjct: 319 VEKCIVHQSAENRRRVYNALLAKNENKDSPLDENSSLSIMMKDPFANYVVQKMVELVDGP 378
Query: 429 --ALLVSKVRLF 438
ALLV K+R +
Sbjct: 379 ERALLVYKIRQY 390
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
+Y L ++ + Y + D+ G +Q + + +E + EI ++ L D +GNYV+
Sbjct: 80 EYKLKDILGHAYEFSKDQHGSRFIQQQLADASAEDKEMIFNEIRNYSIDLMTDVFGNYVI 139
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q L ++G++ S YG VV++C+ + +++ EL PN
Sbjct: 140 QKYFEYGNETQIKILFESMKGNFNFLSMQMYGCRVVQKCMDSVSLDDRLQVVDEL--KPN 197
Query: 413 VSMLLMHPFGNYVIQSAL 430
+ L+ GN+VIQ +
Sbjct: 198 ILNLVKDQNGNHVIQKVI 215
>gi|242063522|ref|XP_002453050.1| hypothetical protein SORBIDRAFT_04g037410 [Sorghum bicolor]
gi|241932881|gb|EES06026.1| hypothetical protein SORBIDRAFT_04g037410 [Sorghum bicolor]
Length = 998
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 155/290 (53%), Gaps = 9/290 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G++V + DQYG R +Q+ + + EE MIF E++ + LM D FGNYV+QK
Sbjct: 663 LLDIVGHVVEFSSDQYGSRFIQQKLETASIEEKNMIFPEILPQARTLMTDVFGNYVIQKF 722
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E +E Q ++ +L QL L +G R + K LE + QQ + L L
Sbjct: 723 FEYGTETQTKQLATLLKGYVLQL---SLQMYGCRVIQKALEVVEVEQQTQMALE-LDGSI 778
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGA 326
+ +D NG++VIQ C++ E +++++ + ++ GC V+Q +E+ +
Sbjct: 779 MRCVRDQNGNHVIQKCIECIPQERIRFIISAFYGHVVELSMHPYGCRVIQRVLEHCDDES 838
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ ++ EI+ + + L ED YGNYV+QH+L P+ ++++ QL G V S K+ SN
Sbjct: 839 TQNAMMEEIMQSVVTLTEDQYGNYVIQHVLQHGKPEERSTIITQLAGQIVKMSQQKFASN 898
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSALLV 432
VVE+CL EQ +I E+L + + + ++ F NYV+Q L +
Sbjct: 899 VVEKCLTFGNPEQRQILINEMLGTTDENEPLQAMMKDQFANYVVQKVLEI 948
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 131/255 (51%), Gaps = 11/255 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L+G ++ L+ YGCR +Q+ + + E+ + +E+ + + D GN+V+QK +E
Sbjct: 738 LKGYVLQLSLQMYGCRVIQKALEVVEVEQQTQMALELDGSIMRCVRDQNGNHVIQKCIEC 797
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+E RI +++ +V + ++ +G R + ++LE+ + + ++ + VTL
Sbjct: 798 IPQE---RIRFIISAFYGHVVELSMHPYGCRVIQRVLEHCDDESTQNAMMEEIMQSVVTL 854
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
T+D G+YVIQ+ ++H E+ ++ ++A ++ K V++ C+ + QR+
Sbjct: 855 TEDQYGNYVIQHVLQHGKPEERSTIITQLAGQIVKMSQQKFASNVVEKCLTFGNPEQRQI 914
Query: 331 LVAEIIANA------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E++ + +D + NYVVQ +L + Q +L +++ H + YG
Sbjct: 915 LINEMLGTTDENEPLQAMMKDQFANYVVQKVLEICDDQNRELILSRIKVHLNALKRYTYG 974
Query: 385 SNVVERC--LLESGE 397
++V R L+ +GE
Sbjct: 975 KHIVARVEKLIAAGE 989
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE + S L + V + D G IQ ++ S E+ + E+
Sbjct: 649 LLEEFKTNKTRSFELLDIVGHVVEFSSDQYGSRFIQQKLETASIEEKNMIFPEILPQART 708
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q EY Q ++L + L L+ YG V+Q L + +
Sbjct: 709 LMTDVFGNYVIQKFFEYGTETQTKQLATLLKGYVLQLSLQMYGCRVIQKALEVVEVEQQT 768
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
+ +L+G + ++ G++V+++C +E ++ R II +V L MHP+G V
Sbjct: 769 QMALELDGSIMRCVRDQNGNHVIQKC-IECIPQERIRFIISAFYG-HVVELSMHPYGCRV 826
Query: 426 IQSAL 430
IQ L
Sbjct: 827 IQRVL 831
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ ++ E+ +++ E++ E +M D F N
Sbjct: 880 ITQLAGQIVKMSQQKFASNVVEKCLTFGNPEQRQILINEMLGTTDENEPLQAMMKDQFAN 939
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E+C ++ R IL + L R H + V KL+
Sbjct: 940 YVVQKVLEICDDQNRELILSRIKVHLNALKRYTYGKHIVARVEKLI 985
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/147 (19%), Positives = 70/147 (47%), Gaps = 2/147 (1%)
Query: 141 DSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFG 200
+S + + ++ ++V L +DQYG +Q + EE I ++ ++ ++ F
Sbjct: 837 ESTQNAMMEEIMQSVVTLTEDQYGNYVIQHVLQHGKPEERSTIITQLAGQIVKMSQQKFA 896
Query: 201 NYVVQKLVELCSEEQRTRIL--LMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISL 258
+ VV+K + + EQR ++ ++ T D+ + ++ + V++ + + + Q L
Sbjct: 897 SNVVEKCLTFGNPEQRQILINEMLGTTDENEPLQAMMKDQFANYVVQKVLEICDDQNREL 956
Query: 259 VLAALRPGAVTLTKDTNGHYVIQYCVK 285
+L+ ++ L + T G +++ K
Sbjct: 957 ILSRIKVHLNALKRYTYGKHIVARVEK 983
>gi|384485031|gb|EIE77211.1| hypothetical protein RO3G_01915 [Rhizopus delemar RA 99-880]
Length = 649
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 157/291 (53%), Gaps = 9/291 (3%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
+LRD+ G+ V + DQ+G R +Q+ + + EE +M+F E++ +LM D FGNYV+QK
Sbjct: 323 TLRDITGHAVEFSGDQHGSRFIQQKLETASSEEKQMVFEEILPNALQLMTDVFGNYVIQK 382
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E S+ Q+T ++ + + +V + L +G R V K LE + QQ +LV L
Sbjct: 383 FFEHGSQAQKT---VLAKHMETHVVSLSLQMYGCRVVQKALEYVLTDQQAALV-RELDGC 438
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q ++ +++++ + Y +AT GC V+Q E+
Sbjct: 439 VLKCVKDQNGNHVVQKAIERVPAHHVQFIIDILHGQVYHLATHPYGCRVIQRVFEHCPKE 498
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q L+ E+ N L +D YGNYV+QH+L + A ++ +++GH + S +K+ SN
Sbjct: 499 QTIHLLEELNRNTSQLVQDQYGNYVIQHILEHGEAKDKALVISKVKGHVLQLSKHKFASN 558
Query: 387 VVERCLLESGEEQSTRIIIE-LLRSPNVSMLLM----HPFGNYVIQSALLV 432
VVE+C+ + +I E LL P+ + LM + NYV+Q L V
Sbjct: 559 VVEKCVAYGNPQDRQELIEEVLLTRPDGTYPLMSMMKDQYANYVVQKMLDV 609
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 110/218 (50%), Gaps = 11/218 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+R+L G ++ KDQ G +Q+ + +P ++ I + +V L P+G V+Q++
Sbjct: 432 VRELDGCVLKCVKDQNGNHVVQKAIERVPAHHVQFIIDILHGQVYHLATHPYGCRVIQRV 491
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E C +EQ +L L + QLV+ + I+ +L+ E + +LV++ ++
Sbjct: 492 FEHCPKEQTIHLLEELNRNTSQLVQDQYGNYVIQHILEHGE----AKDKALVISKVKGHV 547
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV----ADNCYGIAT---DKSGCCVLQHCV 320
+ L+K V++ CV + + +D + L+ EV D Y + + D+ V+Q +
Sbjct: 548 LQLSKHKFASNVVEKCVAYGNPQDRQELIEEVLLTRPDGTYPLMSMMKDQYANYVVQKML 607
Query: 321 EYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLAL 358
+ G+QR+ L+A+I + L + YG +++ L++
Sbjct: 608 DVVDGSQRDLLIAKIKPHLQGLKKYTYGKHLIHKNLSI 645
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 99/237 (41%), Gaps = 48/237 (20%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE + L L + AV + D +G IQ ++ S E+ + + E+ N
Sbjct: 310 LLEEFRTNKTKKLTLRDITGHAVEFSGDQHGSRFIQQKLETASSEEKQMVFEEILPNALQ 369
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ AQ+ L + + + L+ YG VVQ L + A
Sbjct: 370 LMTDVFGNYVIQKFFEHGSQAQKTVLAKHMETHVVSLSLQMYGCRVVQKALEYVLTDQQA 429
Query: 366 SLLRQLEG------------------------HYVSF------------SCNKYGSNVVE 389
+L+R+L+G H+V F + + YG V++
Sbjct: 430 ALVRELDGCVLKCVKDQNGNHVVQKAIERVPAHHVQFIIDILHGQVYHLATHPYGCRVIQ 489
Query: 390 RCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQ----------SALLVSKVR 436
R +EQ+ ++ EL R N S L+ +GNYVIQ AL++SKV+
Sbjct: 490 RVFEHCPKEQTIHLLEELNR--NTSQLVQDQYGNYVIQHILEHGEAKDKALVISKVK 544
>gi|356558296|ref|XP_003547443.1| PREDICTED: pumilio homolog 5-like [Glycine max]
Length = 982
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 160/308 (51%), Gaps = 25/308 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G+IV + DQ+G R +Q+ + S EE ++F EV+ +LM D FGNYV+QK
Sbjct: 652 LSDIIGHIVEFSSDQHGSRFIQQKLESCSGEEKALVFKEVLPHASKLMTDVFGNYVIQKF 711
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQR + L Q++ + L +G R + K LE + Q+ LV L
Sbjct: 712 FEYGSSEQRRELADRLVG---QILPLSLQMYGCRVIQKALEVIELEQKAQLV-HELDGNV 767
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQ----HCVEYS 323
+ +D NG++VIQ C++ + ++L+ ++ GC V+Q HC++ S
Sbjct: 768 MRCVRDQNGNHVIQKCIESIQTKKISFILSAFRGQVATLSMHPYGCRVIQRVLEHCMDES 827
Query: 324 KGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
Q + +V EI+ + LA+D YGNYV QH+L PQ + +L +L GH V S +K+
Sbjct: 828 ---QCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQILSKLSGHIVQLSQHKF 884
Query: 384 GSNVVERCLLESGEEQSTRIIIELL----RSPNVSMLLMHPFGNYVIQS----------A 429
SNVVE+CL + ++ E+ + N+ ++ F NYV+Q A
Sbjct: 885 ASNVVEKCLEYGDATERELLVAEIFGHDDQCDNLLTMMKDQFANYVVQKVIDICSENQRA 944
Query: 430 LLVSKVRL 437
+L+S VR+
Sbjct: 945 MLLSHVRI 952
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 126/256 (49%), Gaps = 9/256 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G I+ L+ YGCR +Q+ + + E+ + E+ V + D GN+V+QK +E
Sbjct: 727 LVGQILPLSLQMYGCRVIQKALEVIELEQKAQLVHELDGNVMRCVRDQNGNHVIQKCIES 786
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
Q +I +L+ Q+ + ++ +G R + ++LE+ + Q ++ + L
Sbjct: 787 I---QTKKISFILSAFRGQVATLSMHPYGCRVIQRVLEHCMDESQCQFIVDEILESVCAL 843
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YV Q+ ++ ++ +L++++ + ++ K V++ C+EY +RE
Sbjct: 844 AQDQYGNYVTQHVLERGKPQERSQILSKLSGHIVQLSQHKFASNVVEKCLEYGDATEREL 903
Query: 331 LVAEIIA------NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
LVAEI N L + +D + NYVVQ ++ + A LL + H + YG
Sbjct: 904 LVAEIFGHDDQCDNLLTMMKDQFANYVVQKVIDICSENQRAMLLSHVRIHAHALKKYTYG 963
Query: 385 SNVVERCLLESGEEQS 400
++V R + GE Q+
Sbjct: 964 KHIVARLEHQFGENQT 979
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 2/188 (1%)
Query: 243 VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADN 302
++ LE+L + + L+ + V + D +G IQ ++ S E+ + EV +
Sbjct: 635 MVNFLEDLKSGKGRRFELSDIIGHIVEFSSDQHGSRFIQQKLESCSGEEKALVFKEVLPH 694
Query: 303 CYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ 362
+ TD G V+Q EY QR L ++ L L+ YG V+Q L + +
Sbjct: 695 ASKLMTDVFGNYVIQKFFEYGSSEQRRELADRLVGQILPLSLQMYGCRVIQKALEVIELE 754
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFG 422
A L+ +L+G+ + ++ G++V+++C +ES + + I+ R V+ L MHP+G
Sbjct: 755 QKAQLVHELDGNVMRCVRDQNGNHVIQKC-IESIQTKKISFILSAFRG-QVATLSMHPYG 812
Query: 423 NYVIQSAL 430
VIQ L
Sbjct: 813 CRVIQRVL 820
>gi|409082310|gb|EKM82668.1| hypothetical protein AGABI1DRAFT_53014, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 394
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 172/322 (53%), Gaps = 19/322 (5%)
Query: 115 NGNELSSVPRNQWMSSL-SLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMS 173
N LS+V R+ + + K +W L D+ G+IV + DQYG R +Q +
Sbjct: 63 NNIRLSTVLRSNLLEEFRNRKSRKW--------ELIDIVGHIVEFSTDQYGSRFIQTKLE 114
Query: 174 SLPKEEIEMIFVEVID-RVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVR 232
++I +++ E++ +LM D FGNYV+QKL++ +++QR + ++ N+ +V
Sbjct: 115 GAGLDKIRVVYDEIVPLYAMKLMQDVFGNYVIQKLMDFGTQDQRAGLARLVENE---IVD 171
Query: 233 ICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDT 292
+ LN +G R V K++E T QQ LV + P +T+ KDTNG++VIQ V S E
Sbjct: 172 LSLNVYGCRVVQKVIELCTAEQQTQLV-RKIEPHVLTVVKDTNGNHVIQKFVMTVSPERL 230
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
+L D +A GC VLQ C+EY ++ E+ A L +D +GNYVV
Sbjct: 231 SFL-RTFRDAARQLAIHPYGCRVLQRCLEYLPNDYCRGMIDELHGIADSLMQDQFGNYVV 289
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q++L P + Q++G + S +K+ SNVVE+ L+ + E +++ E+L +
Sbjct: 290 QYILQHGQPHDCVIIAAQMKGSVLKMSRHKFASNVVEKVLVNANPETRFKLVDEILTIEH 349
Query: 413 ----VSMLLMHPFGNYVIQSAL 430
V L+M +GNYVIQ+AL
Sbjct: 350 GVDPVHALMMDAYGNYVIQTAL 371
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 8/166 (4%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
S LR R LA YGCR LQR + LP + + E+ LM D FGNYVVQ
Sbjct: 231 SFLRTFRDAARQLAIHPYGCRVLQRCLEYLPNDYCRGMIDELHGIADSLMQDQFGNYVVQ 290
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLV--LAAL 263
+++ Q +++ ++++ + V K+L N + LV + +
Sbjct: 291 YILQ---HGQPHDCVIIAAQMKGSVLKMSRHKFASNVVEKVLVNANPETRFKLVDEILTI 347
Query: 264 RPGAV---TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
G L D G+YVIQ + E + L V + I
Sbjct: 348 EHGVDPVHALMMDAYGNYVIQTALNQVDSEQRELLYARVRSHLISI 393
>gi|426200142|gb|EKV50066.1| hypothetical protein AGABI2DRAFT_199387 [Agaricus bisporus var.
bisporus H97]
Length = 423
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 172/322 (53%), Gaps = 19/322 (5%)
Query: 115 NGNELSSVPRNQWMSSL-SLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMS 173
N LS+V R+ + + K +W L D+ G+IV + DQYG R +Q +
Sbjct: 63 NNIRLSTVLRSNLLEEFRNRKSRKW--------ELIDIVGHIVEFSTDQYGSRFIQTKLE 114
Query: 174 SLPKEEIEMIFVEVID-RVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVR 232
++I +++ E++ +LM D FGNYV+QKL++ +++QR + ++ N+ +V
Sbjct: 115 GAGLDKIRVVYDEIVPLYAMKLMQDVFGNYVIQKLMDFGTQDQRAGLARLVENE---IVD 171
Query: 233 ICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDT 292
+ LN +G R V K++E T QQ LV + P +T+ KDTNG++VIQ V S E
Sbjct: 172 LSLNVYGCRVVQKVIELCTAEQQTQLV-RKIEPHVLTVVKDTNGNHVIQKFVMTVSPERL 230
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
+L D +A GC VLQ C+EY ++ E+ A L +D +GNYVV
Sbjct: 231 SFL-RTFRDAARQLAIHPYGCRVLQRCLEYLPNDYCRGMIDELHGIADSLMQDQFGNYVV 289
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q++L P + Q++G + S +K+ SNVVE+ L+ + E +++ E+L +
Sbjct: 290 QYILQHGQPHDCVIIAAQMKGSVLKMSRHKFASNVVEKVLVNANPETRFKLVDEILTIEH 349
Query: 413 ----VSMLLMHPFGNYVIQSAL 430
V L+M +GNYVIQ+AL
Sbjct: 350 GVDPVHALMMDAYGNYVIQTAL 371
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 8/166 (4%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
S LR R LA YGCR LQR + LP + + E+ LM D FGNYVVQ
Sbjct: 231 SFLRTFRDAARQLAIHPYGCRVLQRCLEYLPNDYCRGMIDELHGIADSLMQDQFGNYVVQ 290
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLV--LAAL 263
+++ Q +++ ++++ + V K+L N + LV + +
Sbjct: 291 YILQ---HGQPHDCVIIAAQMKGSVLKMSRHKFASNVVEKVLVNANPETRFKLVDEILTI 347
Query: 264 RPGAV---TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
G L D G+YVIQ + E + L V + I
Sbjct: 348 EHGVDPVHALMMDAYGNYVIQTALNQVDSEQRELLYARVRSHLISI 393
>gi|313229012|emb|CBY18164.1| unnamed protein product [Oikopleura dioica]
Length = 750
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 162/284 (57%), Gaps = 5/284 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL ++V ++DQ+G R +Q+ + + +++F E+I +L+ID FGNYV+QK
Sbjct: 420 LRDLLNHMVEFSQDQHGSRFIQQKLERCNPSDRQLVFNEIISHSYQLIIDVFGNYVIQKF 479
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E + EQ+ +I+ N +++++ L +G R + LE+L QQ+ +++ L+
Sbjct: 480 LEFGTAEQKQQIV---DNIKGKVLQLSLQMYGCRVIQTALESLNQEQQM-IIVNELQNSI 535
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ ++ ++ +++++ G++T GC V+Q +E+ Q
Sbjct: 536 LRCVKDQNGNHVIQKIIECLPADNLEFIISAFNGQVVGLSTHAYGCRVVQRVLEHCTEEQ 595
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ EI N +L +D YGNYV+QH+L + +LR + G V+ S +K+ SNV
Sbjct: 596 YMPIMEEIHKNHEMLIQDQYGNYVIQHILNRGKMEDRQMILRAVMGRIVTLSQHKFASNV 655
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHP-FGNYVIQSAL 430
+E+C+ S + +I E+ +SP+ ++M F NYV+Q L
Sbjct: 656 IEKCVTTSNRTERALLIEEVCQSPDSLFIMMKDQFANYVVQKML 699
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 128/252 (50%), Gaps = 10/252 (3%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
+++G ++ L+ YGCR +Q + SL +E+ +I E+ + + + D GN+V+QK++E
Sbjct: 494 NIKGKVLQLSLQMYGCRVIQTALESLNQEQQMIIVNELQNSILRCVKDQNGNHVIQKIIE 553
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
+ + +++ + Q+V + + +G R V ++LE+ T Q + ++ +
Sbjct: 554 CLPAD---NLEFIISAFNGQVVGLSTHAYGCRVVQRVLEHCTEEQYMP-IMEEIHKNHEM 609
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
L +D G+YVIQ+ + ED + +L V ++ K V++ CV S +R
Sbjct: 610 LIQDQYGNYVIQHILNRGKMEDRQMILRAVMGRIVTLSQHKFASNVIEKCVTTSNRTERA 669
Query: 330 RLVAEIIANA---LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
L+ E+ + ++ +D + NYVVQ +L + ++++++ H + YG +
Sbjct: 670 LLIEEVCQSPDSLFIMMKDQFANYVVQKMLDMGDSAQRQKMVQKMKPHVSNLKRFTYGKH 729
Query: 387 V---VERCLLES 395
+ +E+ +L S
Sbjct: 730 ILTKLEKIILHS 741
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI---DRVCELMIDPFGNYVV 204
LR + G IV L++ ++ +++ +++ + E ++ EV D + +M D F NYVV
Sbjct: 636 LRAVMGRIVTLSQHKFASNVIEKCVTTSNRTERALLIEEVCQSPDSLFIMMKDQFANYVV 695
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
QK++++ QR +++ + L R H + + K++
Sbjct: 696 QKMLDMGDSAQRQKMVQKMKPHVSNLKRFTYGKHILTKLEKII 738
>gi|356557841|ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1054
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 158/292 (54%), Gaps = 11/292 (3%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
C L ++ G++V + DQYG R +Q+ + + EE M++ E++ + LM D FGNYVV
Sbjct: 714 CFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPQALALMTDVFGNYVV 773
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQ-LVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL 263
QK E QR L N F+ ++ + L +G R + K +E + Q+I +V L
Sbjct: 774 QKFFEHGLASQRRE----LANKLFEHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMV-QEL 828
Query: 264 RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
+ +D NG++VIQ C++ + ++++ D ++T GC V+Q +E+
Sbjct: 829 DGNIMRCVRDQNGNHVIQKCIECVPEDAINFIVSTFFDQVVTLSTHPYGCRVIQRVLEHC 888
Query: 324 KGAQ-RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
K +++++ EI+ +LA+D YGNYVVQH+L P ++++++L G V S K
Sbjct: 889 KDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQK 948
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
+ SNVVE+CL G + ++ E+L S + + ++ F NYV+Q L
Sbjct: 949 FASNVVEKCLTFGGPSERQLLVNEMLGSTDENEPLQAMMKDQFANYVVQKVL 1000
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 284 VKHFSHEDTK-YLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLL 342
++ F TK + L+E++ + + D+ G +Q +E + ++ + EI+ AL L
Sbjct: 704 LEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPQALAL 763
Query: 343 AEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTR 402
D +GNYVVQ + L +L H ++ S YG V+++ + +Q +
Sbjct: 764 MTDVFGNYVVQKFFEHGLASQRRELANKLFEHVLTLSLQMYGCRVIQKAIEVVDLDQKIK 823
Query: 403 IIIELLRSPNVSMLLMHPFGNYVIQ 427
++ EL N+ + GN+VIQ
Sbjct: 824 MVQEL--DGNIMRCVRDQNGNHVIQ 846
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE + + L+ + V + D G IQ ++ + E+ + E+
Sbjct: 703 LLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPQALA 762
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ +QR L ++ + L L+ YG V+Q + +
Sbjct: 763 LMTDVFGNYVVQKFFEHGLASQRRELANKLFEHVLTLSLQMYGCRVIQKAIEVVDLDQKI 822
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++++L+G+ + ++ G++V+++C +E E + I+ V L HP+G V
Sbjct: 823 KMVQELDGNIMRCVRDQNGNHVIQKC-IECVPEDAINFIVSTFFD-QVVTLSTHPYGCRV 880
Query: 426 IQSAL 430
IQ L
Sbjct: 881 IQRVL 885
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L G IV +++ ++ +++ ++ E +++ E++ E +M D F N
Sbjct: 934 IKELAGKIVQMSQQKFASNVVEKCLTFGGPSERQLLVNEMLGSTDENEPLQAMMKDQFAN 993
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 994 YVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIVARVEKLV 1039
>gi|384488095|gb|EIE80275.1| hypothetical protein RO3G_04980 [Rhizopus delemar RA 99-880]
Length = 807
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 158/291 (54%), Gaps = 11/291 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+IV + DQ+G R +Q+ + + +E +M+F EV+ +LM D FGNYV+QK
Sbjct: 486 LKDIEGHIVEFSGDQHGSRFIQQKLETANSDEKQMVFEEVLPNALQLMTDVFGNYVLQKF 545
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+T ++ + ++ + L +G R V K LE++ QQ LV L
Sbjct: 546 FEHGNQMQKT---ILAKQMEGHVLSLSLQMYGCRVVQKALEHVLTEQQAKLV-KELDGCI 601
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ ++ + ++++N Y +AT GC V+Q E+ Q
Sbjct: 602 LKCIKDQNGNHVIQKAIERVPAQHIQFIINAFHGQVYNLATHPYGCRVIQRMFEHCTENQ 661
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
E L+ E+ L +D YGNYV+QH+L P ++ ++ GH + S +K+ SNV
Sbjct: 662 TEPLLDELHRCTGQLVQDQYGNYVIQHILERGRPVDKTFVIEKIRGHVLQLSKHKFASNV 721
Query: 388 VERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSALLV 432
VE+C ++ G ++ +++IE + P ++ ++ + NYVIQ L V
Sbjct: 722 VEKC-VDFGSKRDRQLLIEEVLQPRSDGTLPLATMMKDQYANYVIQKMLDV 771
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 119/248 (47%), Gaps = 11/248 (4%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ + G++++L+ YGCR +Q+ + + E+ + E+ + + + D GN+V+QK +
Sbjct: 559 KQMEGHVLSLSLQMYGCRVVQKALEHVLTEQQAKLVKELDGCILKCIKDQNGNHVIQKAI 618
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
E + I ++ Q+ + + +G R + ++ E+ T Q +L L
Sbjct: 619 ERVPAQ---HIQFIINAFHGQVYNLATHPYGCRVIQRMFEHCTE-NQTEPLLDELHRCTG 674
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++ D +++ ++ + ++ K V++ CV++ R
Sbjct: 675 QLVQDQYGNYVIQHILERGRPVDKTFVIEKIRGHVLQLSKHKFASNVVEKCVDFGSKRDR 734
Query: 329 ERLVAEIIA----NALLLA---EDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
+ L+ E++ L LA +D Y NYV+Q +L + L+ +++ H
Sbjct: 735 QLLIEEVLQPRSDGTLPLATMMKDQYANYVIQKMLDVVDDDQRELLVTKIKPHLQFLKKY 794
Query: 382 KYGSNVVE 389
YG ++++
Sbjct: 795 TYGKHLIQ 802
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 2/182 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE N + L + V + D +G IQ ++ + ++ + + EV N
Sbjct: 472 LLEEFRNSKNKKYELKDIEGHIVEFSGDQHGSRFIQQKLETANSDEKQMVFEEVLPNALQ 531
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G VLQ E+ Q+ L ++ + L L+ YG VVQ L + + A
Sbjct: 532 LMTDVFGNYVLQKFFEHGNQMQKTILAKQMEGHVLSLSLQMYGCRVVQKALEHVLTEQQA 591
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
L+++L+G + ++ G++V+++ +E Q + II V L HP+G V
Sbjct: 592 KLVKELDGCILKCIKDQNGNHVIQKA-IERVPAQHIQFIINAFHG-QVYNLATHPYGCRV 649
Query: 426 IQ 427
IQ
Sbjct: 650 IQ 651
>gi|356530316|ref|XP_003533728.1| PREDICTED: pumilio homolog 5-like [Glycine max]
Length = 985
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 160/305 (52%), Gaps = 19/305 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G+IV + DQ+G R +Q+ + S EE ++F EV+ +LM D FGNYV+QK
Sbjct: 655 LSDIIGHIVEFSSDQHGSRFIQQKLESCSVEEKTLVFKEVLPHASKLMTDVFGNYVIQKF 714
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQR + L Q++ + L +G R + K LE + Q+ LV L
Sbjct: 715 FEYGSPEQRRELADRLVG---QILPLSLQMYGCRVIQKALEVIELEQKAQLV-HELDGNV 770
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGA 326
+ +D NG++VIQ C++ + ++L+ ++ GC V+Q +E+ + +
Sbjct: 771 MRCVRDQNGNHVIQKCIESIPTKKISFILSAFRGQVATLSMHPYGCRVMQRVLEHCTDES 830
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q + +V EI+ + LA+D YGNYV QH+L PQ + ++ +L GH V S +K+ SN
Sbjct: 831 QCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIINKLSGHIVQLSQHKFASN 890
Query: 387 VVERCLLESGEEQSTRIIIELL----RSPNVSMLLMHPFGNYVIQS----------ALLV 432
VVE+CL + ++ E+ + N+ ++ F NYV+Q A+L+
Sbjct: 891 VVEKCLEYGDTTERELLVAEIFGHDEKCDNLLTMMKDQFANYVVQKVIDICSENQRAMLL 950
Query: 433 SKVRL 437
S VR+
Sbjct: 951 SHVRI 955
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 127/256 (49%), Gaps = 9/256 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G I+ L+ YGCR +Q+ + + E+ + E+ V + D GN+V+QK +E
Sbjct: 730 LVGQILPLSLQMYGCRVIQKALEVIELEQKAQLVHELDGNVMRCVRDQNGNHVIQKCIES 789
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ +I +L+ Q+ + ++ +G R + ++LE+ T+ Q ++ + L
Sbjct: 790 IPTK---KISFILSAFRGQVATLSMHPYGCRVMQRVLEHCTDESQCQFIVDEILESVCAL 846
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YV Q+ ++ ++ ++N+++ + ++ K V++ C+EY +RE
Sbjct: 847 AQDQYGNYVTQHVLERGKPQERSQIINKLSGHIVQLSQHKFASNVVEKCLEYGDTTEREL 906
Query: 331 LVAEIIA------NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
LVAEI N L + +D + NYVVQ ++ + A LL + H + YG
Sbjct: 907 LVAEIFGHDEKCDNLLTMMKDQFANYVVQKVIDICSENQRAMLLSHVRIHAHALKKYTYG 966
Query: 385 SNVVERCLLESGEEQS 400
++V R + GE Q+
Sbjct: 967 KHIVARLEHQFGENQT 982
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 3/203 (1%)
Query: 228 FQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
+Q+ R + H + ++ LE+L + + L+ + V + D +G IQ ++
Sbjct: 624 WQVQRSFDSAHDPK-IVNFLEDLKSGKSRRFELSDIIGHIVEFSSDQHGSRFIQQKLESC 682
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S E+ + EV + + TD G V+Q EY QR L ++ L L+ Y
Sbjct: 683 SVEEKTLVFKEVLPHASKLMTDVFGNYVIQKFFEYGSPEQRRELADRLVGQILPLSLQMY 742
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
G V+Q L + + A L+ +L+G+ + ++ G++V+++C +ES + I+
Sbjct: 743 GCRVIQKALEVIELEQKAQLVHELDGNVMRCVRDQNGNHVIQKC-IESIPTKKISFILSA 801
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
R V+ L MHP+G V+Q L
Sbjct: 802 FRG-QVATLSMHPYGCRVMQRVL 823
>gi|6056191|gb|AAF02808.1|AC009400_4 putative RNA binding protein [Arabidopsis thaliana]
Length = 1031
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 154/288 (53%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G+++ + DQYG R +Q+ + + EE IF E++ LM D FGNYV+QK
Sbjct: 662 LSEIVGHVIEFSMDQYGSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKF 721
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + +QR + +T ++ + L +G R + K LE + QQ +V L
Sbjct: 722 FEHGTTKQRKELAEQVTG---HVLALSLQMYGCRVIQKALEVVELEQQARMV-KELDGSV 777
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ D NG++VIQ C++ + +++++ ++T GC V+Q +E+ +
Sbjct: 778 MKCVHDQNGNHVIQKCIERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIE 837
Query: 328 RERLVAEIIANAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+R++ E I +++ LA+D YGNYV+QH++ P + ++ +L G V S K+ SN
Sbjct: 838 TQRIIMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASN 897
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL G E+ ++ E+L + + ++ PFGNYV+Q L
Sbjct: 898 VVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVL 945
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 129/245 (52%), Gaps = 9/245 (3%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G+++AL+ YGCR +Q+ + + E+ + E+ V + + D GN+V+QK +E
Sbjct: 739 GHVLALSLQMYGCRVIQKALEVVELEQQARMVKELDGSVMKCVHDQNGNHVIQKCIERLP 798
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
++ I ++++ +++ + + +G R + ++LE++ + + +++ + TL +
Sbjct: 799 QDW---IQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQRIIMEEIMDSVCTLAQ 855
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D G+YVIQ+ ++H + ++N++A ++ K V++ C+ + +R+ LV
Sbjct: 856 DQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNVVEKCLTFGGPEERQVLV 915
Query: 333 AEIIA----NALLLA--EDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
E++ N L A +D +GNYVVQ +L Q A +L +++ H + YG +
Sbjct: 916 NEMLGYTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLALILSRIKVHLNALKRYTYGKH 975
Query: 387 VVERC 391
+V R
Sbjct: 976 IVARV 980
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 2/192 (1%)
Query: 239 GIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNE 298
G A LLE N + SL L+ + + + D G IQ ++ + E+ + E
Sbjct: 641 GSTAEASLLEGFKNNKTRSLELSEIVGHVIEFSMDQYGSRFIQQKLETATDEEKNAIFPE 700
Query: 299 VADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLAL 358
+ + TD G V+Q E+ QR+ L ++ + L L+ YG V+Q L +
Sbjct: 701 ILPYGRTLMTDVFGNYVIQKFFEHGTTKQRKELAEQVTGHVLALSLQMYGCRVIQKALEV 760
Query: 359 RVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLM 418
+ A ++++L+G + ++ G++V+++C +E + + II V L
Sbjct: 761 VELEQQARMVKELDGSVMKCVHDQNGNHVIQKC-IERLPQDWIQFIISSFYG-KVLALST 818
Query: 419 HPFGNYVIQSAL 430
HP+G VIQ L
Sbjct: 819 HPYGCRVIQRVL 830
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ ++ EE +++ E++ E +M DPFGN
Sbjct: 879 INKLAGQIVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGN 938
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++ IL + L R H + V KL+
Sbjct: 939 YVVQKVLETCDDQSLALILSRIKVHLNALKRYTYGKHIVARVEKLI 984
>gi|357445831|ref|XP_003593193.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355482241|gb|AES63444.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 601
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 106/148 (71%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+SL + RG I +AKDQ G R LQR E+I+MIF E+I V ELM+ PFGNY+++
Sbjct: 422 NSLMEARGCIYLMAKDQNGGRFLQRMFDEGRMEDIQMIFNEIIGHVVELMMSPFGNYLIR 481
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+++CSEEQR +I+LM+ + QLVRI LNTHG R V KL+E L QQ+SLV++AL P
Sbjct: 482 KLLDVCSEEQRMQIILMVIQEPGQLVRISLNTHGTRVVQKLIETLKTKQQVSLVVSALEP 541
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTK 293
G + L KD NG++V+Q+C+++ + D K
Sbjct: 542 GFLILIKDNNGNHVVQHCLEYLRNGDNK 569
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 304 YGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLAL----R 359
Y +A D++G LQ + + + + EII + + L +GNY+++ LL + +
Sbjct: 432 YLMAKDQNGGRFLQRMFDEGRMEDIQMIFNEIIGHVVELMMSPFGNYLIRKLLDVCSEEQ 491
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMH 419
QI ++ Q G V S N +G+ VV++ + +Q +++ L P +L+
Sbjct: 492 RMQIILMVI-QEPGQLVRISLNTHGTRVVQKLIETLKTKQQVSLVVSALE-PGFLILIKD 549
Query: 420 PFGNYVIQSAL 430
GN+V+Q L
Sbjct: 550 NNGNHVVQHCL 560
>gi|395333575|gb|EJF65952.1| ARM repeat-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 410
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 160/294 (54%), Gaps = 12/294 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR-VCELMIDPFGNYVVQK 206
LRD+ G IV + DQ+G R +Q+ + S EE+E++F E++ + +LM D FGNYVVQK
Sbjct: 45 LRDIFGYIVEFSGDQHGSRFIQQKLESASSEEMEIVFDEIVPQYAVQLMQDVFGNYVVQK 104
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
+ E + Q+ R++ + Q++ + L +G R V K +E + QQ+ V L P
Sbjct: 105 MFEYGTAAQKARLVSTMEG---QVLGLSLQMYGCRVVQKAIEYVGPDQQVMFV-QELSPS 160
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++VIQ ++H E ++ N + Y ++T GC VLQ C EY
Sbjct: 161 VLRCVKDANGNHVIQKIIEHVVPERLAFV-NAFRGSVYELSTHPYGCRVLQRCFEYLPDE 219
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q L+ E+ L D +GNYVVQ +L PQ A ++ +L G + + +K+ SN
Sbjct: 220 QTRPLLDELHKYVSNLMIDQFGNYVVQFVLEHGTPQDRAMIIAKLTGQMNNMAKHKFASN 279
Query: 387 VVERCLLESGEEQSTRIIIELLR-----SPNVSMLLMH-PFGNYVIQSALLVSK 434
V E+ L+ + + ++I E++ P+ M LM FGNYV+Q AL V++
Sbjct: 280 VCEKALVTADPDSRRQLIDEIMTPKQQDGPSPLMSLMKDSFGNYVLQRALTVAE 333
>gi|297833816|ref|XP_002884790.1| hypothetical protein ARALYDRAFT_897212 [Arabidopsis lyrata subsp.
lyrata]
gi|297330630|gb|EFH61049.1| hypothetical protein ARALYDRAFT_897212 [Arabidopsis lyrata subsp.
lyrata]
Length = 1005
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 154/288 (53%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G+++ + DQYG R +Q+ + + EE IF E++ LM D FGNYV+QK
Sbjct: 664 LSEIVGHVIEFSMDQYGSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKF 723
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + +QR + +T ++ + L +G R + K LE + QQ +V L
Sbjct: 724 FEHGTNKQRKELAEQVTG---HVLALSLQMYGCRVIQKALEVVELEQQARIV-QELDGSV 779
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ D NG++VIQ C++ + +++++ ++T GC V+Q +E+ +
Sbjct: 780 MKCVHDQNGNHVIQKCIERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIE 839
Query: 328 RERLVAEIIANAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+R++ E I +++ LA+D YGNYV+QH++ P + ++ +L G V S K+ SN
Sbjct: 840 TQRIIMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASN 899
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL G E+ ++ E+L + + ++ PFGNYV+Q L
Sbjct: 900 VVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVL 947
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 134/253 (52%), Gaps = 11/253 (4%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G+++AL+ YGCR +Q+ + + E+ I E+ V + + D GN+V+QK +E
Sbjct: 741 GHVLALSLQMYGCRVIQKALEVVELEQQARIVQELDGSVMKCVHDQNGNHVIQKCIERLP 800
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
++ I ++++ +++ + + +G R + ++LE++ + + +++ + TL +
Sbjct: 801 QDW---IQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQRIIMEEIMDSVCTLAQ 857
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D G+YVIQ+ ++H + ++N++A ++ K V++ C+ + +R+ LV
Sbjct: 858 DQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNVVEKCLTFGGPEERQVLV 917
Query: 333 AEIIA----NALLLA--EDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
E++ N L A +D +GNYVVQ +L Q A +L +++ H + YG +
Sbjct: 918 NEMLGYTDENEPLQAMMKDPFGNYVVQKVLETCNDQSLALILSRIKVHLNALKRYTYGKH 977
Query: 387 VVERC--LLESGE 397
+V R L+ +GE
Sbjct: 978 IVARVEKLITTGE 990
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 2/192 (1%)
Query: 239 GIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNE 298
G A LLE N + SL L+ + + + D G IQ ++ + E+ + E
Sbjct: 643 GSMAEASLLEGFKNNKTRSLELSEIVGHVIEFSMDQYGSRFIQQKLETATDEEKNAIFPE 702
Query: 299 VADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLAL 358
+ + TD G V+Q E+ QR+ L ++ + L L+ YG V+Q L +
Sbjct: 703 ILPYGRTLMTDVFGNYVIQKFFEHGTNKQRKELAEQVTGHVLALSLQMYGCRVIQKALEV 762
Query: 359 RVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLM 418
+ A ++++L+G + ++ G++V+++C +E + + II V L
Sbjct: 763 VELEQQARIVQELDGSVMKCVHDQNGNHVIQKC-IERLPQDWIQFIISSFYG-KVLALST 820
Query: 419 HPFGNYVIQSAL 430
HP+G VIQ L
Sbjct: 821 HPYGCRVIQRVL 832
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ ++ EE +++ E++ E +M DPFGN
Sbjct: 881 INKLAGQIVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGN 940
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLA 261
YVVQK++E C+++ IL + L R H + V KL+ +S LA
Sbjct: 941 YVVQKVLETCNDQSLALILSRIKVHLNALKRYTYGKHIVARVEKLITTGERRIGLSSSLA 1000
Query: 262 A 262
A
Sbjct: 1001 A 1001
>gi|430812324|emb|CCJ30264.1| unnamed protein product [Pneumocystis jirovecii]
Length = 738
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 157/289 (54%), Gaps = 11/289 (3%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
D+ G+IV + DQ+G R +Q+ + E+ E++F E+ +LM D FGNYV+QK +E
Sbjct: 403 DIFGHIVEFSGDQHGSRFIQQALEGASAEDKEIVFQEIFPNSLQLMTDVFGNYVIQKFME 462
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
+ Q+T L+L ++ + L T+G R V K LE + Q+ISLV L +
Sbjct: 463 HGDQMQKT---LLLEQMKGHVLTLSLQTYGCRVVQKALEYIQIDQKISLV-KELNGNVLK 518
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
K+ NG++VIQ ++ E ++L+N Y +AT GC V+Q +EY +Q
Sbjct: 519 CIKNQNGNHVIQKIIEKVPIEHIQFLINTFQGQIYVLATHPYGCRVIQRMLEYC--SQTR 576
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVE 389
L+ E+ A L D YGNY +QH++ P+ + ++ ++G+ FS +K+ SNVVE
Sbjct: 577 DLIKELHLYAQNLIRDQYGNYCIQHIIEKGEPEDRSKIISVVKGNVFRFSRHKFASNVVE 636
Query: 390 RCLLESGEEQSTRIIIELLRSPNVSMLLMHP-----FGNYVIQSALLVS 433
+C+ +E+ +I E++ S M + P + NYVI+ AL V+
Sbjct: 637 KCITYGTDEEKKLLIDEIIESNENGMSFLLPMIKDQYANYVIKKALDVA 685
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 122/255 (47%), Gaps = 16/255 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++G+++ L+ YGCR +Q+ + + ++ + E+ V + + + GN+V+QK+
Sbjct: 473 LEQMKGHVLTLSLQTYGCRVVQKALEYIQIDQKISLVKELNGNVLKCIKNQNGNHVIQKI 532
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E E I ++ Q+ + + +G R + ++LE + Q ++ L A
Sbjct: 533 IEKVPIE---HIQFLINTFQGQIYVLATHPYGCRVIQRMLEYCS---QTRDLIKELHLYA 586
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
L +D G+Y IQ+ ++ ED +++ V N + + K V++ C+ Y +
Sbjct: 587 QNLIRDQYGNYCIQHIIEKGEPEDRSKIISVVKGNVFRFSRHKFASNVVEKCITYGTDEE 646
Query: 328 RERLVAEIIANA-------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSC 380
++ L+ EII + L + +D Y NYV++ L + L+ +++ H
Sbjct: 647 KKLLIDEIIESNENGMSFLLPMIKDQYANYVIKKALDVACDDQRNKLISEIKPHLQFLKK 706
Query: 381 NKYG---SNVVERCL 392
N +G S+ +ER +
Sbjct: 707 NVHGKALSSNIERLI 721
>gi|22330960|ref|NP_187647.2| protein pumilio 4 [Arabidopsis thaliana]
gi|313471414|sp|Q9SS47.2|PUM4_ARATH RecName: Full=Pumilio homolog 4; Short=APUM-4; Short=AtPUM4
gi|332641375|gb|AEE74896.1| protein pumilio 4 [Arabidopsis thaliana]
Length = 1003
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 154/288 (53%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G+++ + DQYG R +Q+ + + EE IF E++ LM D FGNYV+QK
Sbjct: 662 LSEIVGHVIEFSMDQYGSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKF 721
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + +QR + +T ++ + L +G R + K LE + QQ +V L
Sbjct: 722 FEHGTTKQRKELAEQVTG---HVLALSLQMYGCRVIQKALEVVELEQQARMV-KELDGSV 777
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ D NG++VIQ C++ + +++++ ++T GC V+Q +E+ +
Sbjct: 778 MKCVHDQNGNHVIQKCIERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIE 837
Query: 328 RERLVAEIIANAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+R++ E I +++ LA+D YGNYV+QH++ P + ++ +L G V S K+ SN
Sbjct: 838 TQRIIMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASN 897
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL G E+ ++ E+L + + ++ PFGNYV+Q L
Sbjct: 898 VVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVL 945
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 134/253 (52%), Gaps = 11/253 (4%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G+++AL+ YGCR +Q+ + + E+ + E+ V + + D GN+V+QK +E
Sbjct: 739 GHVLALSLQMYGCRVIQKALEVVELEQQARMVKELDGSVMKCVHDQNGNHVIQKCIERLP 798
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
++ I ++++ +++ + + +G R + ++LE++ + + +++ + TL +
Sbjct: 799 QDW---IQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQRIIMEEIMDSVCTLAQ 855
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D G+YVIQ+ ++H + ++N++A ++ K V++ C+ + +R+ LV
Sbjct: 856 DQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNVVEKCLTFGGPEERQVLV 915
Query: 333 AEIIA----NALLLA--EDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
E++ N L A +D +GNYVVQ +L Q A +L +++ H + YG +
Sbjct: 916 NEMLGYTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLALILSRIKVHLNALKRYTYGKH 975
Query: 387 VVERC--LLESGE 397
+V R L+ +GE
Sbjct: 976 IVARVEKLITTGE 988
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 2/192 (1%)
Query: 239 GIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNE 298
G A LLE N + SL L+ + + + D G IQ ++ + E+ + E
Sbjct: 641 GSTAEASLLEGFKNNKTRSLELSEIVGHVIEFSMDQYGSRFIQQKLETATDEEKNAIFPE 700
Query: 299 VADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLAL 358
+ + TD G V+Q E+ QR+ L ++ + L L+ YG V+Q L +
Sbjct: 701 ILPYGRTLMTDVFGNYVIQKFFEHGTTKQRKELAEQVTGHVLALSLQMYGCRVIQKALEV 760
Query: 359 RVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLM 418
+ A ++++L+G + ++ G++V+++C +E + + II V L
Sbjct: 761 VELEQQARMVKELDGSVMKCVHDQNGNHVIQKC-IERLPQDWIQFIISSFYG-KVLALST 818
Query: 419 HPFGNYVIQSAL 430
HP+G VIQ L
Sbjct: 819 HPYGCRVIQRVL 830
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ ++ EE +++ E++ E +M DPFGN
Sbjct: 879 INKLAGQIVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGN 938
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLA 261
YVVQK++E C ++ IL + L R H + V KL+ +S LA
Sbjct: 939 YVVQKVLETCDDQSLALILSRIKVHLNALKRYTYGKHIVARVEKLITTGERRIGLSSSLA 998
Query: 262 A 262
A
Sbjct: 999 A 999
>gi|146412760|ref|XP_001482351.1| hypothetical protein PGUG_05371 [Meyerozyma guilliermondii ATCC
6260]
Length = 761
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 158/292 (54%), Gaps = 16/292 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+ V KDQ+G R +Q+ + + EE E+IF E+ + ELM D FGNYV+QK
Sbjct: 416 LKDIYGHAVEFTKDQHGSRFIQQKLPTASNEEKEVIFNEIRETSYELMTDVFGNYVIQKY 475
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + Q+ +L + ++L L +G R V + LE + QI L++ LR
Sbjct: 476 FEYGNNTQKQVLLKFMIGHIYEL---SLQMYGCRVVQRALEAVDLKGQI-LIIDELRDHI 531
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ ++ + ++++ + D Y ++T GC V+Q +EY+ +
Sbjct: 532 LVCAKDQNGNHVIQKSIEKIPFSEITFIMDSLEDQIYHLSTHPYGCRVIQRLLEYADPKR 591
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ ++ E+ L +D YGNYV+QH+L + ++L + G V+FS +K+ SNV
Sbjct: 592 QQEMLDELNRFIFYLIQDQYGNYVMQHILERGSSKDREAILEVVLGSVVNFSKHKFASNV 651
Query: 388 VERCLLESGEEQSTRIIIELL---RSPNV---------SMLLMHPFGNYVIQ 427
+E+C+ +Q RI+ E++ P V ++++ + NYVIQ
Sbjct: 652 IEKCIKFGTVKQKRRILDEVMLGNEDPTVETVSDESPLALMMKDQYANYVIQ 703
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 110/223 (49%), Gaps = 18/223 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+ + G+I L+ YGCR +QR + ++ + +I E+ D + D GN+V+QK
Sbjct: 488 LKFMIGHIYELSLQMYGCRVVQRALEAVDLKGQILIIDELRDHILVCAKDQNGNHVIQKS 547
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E + T I+ L + Q+ + + +G R + +LLE +P++ +L L
Sbjct: 548 IEKIPFSEITFIMDSLED---QIYHLSTHPYGCRVIQRLLE-YADPKRQQEMLDELNRFI 603
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
L +D G+YV+Q+ ++ S +D + +L V + + K V++ C+++ Q
Sbjct: 604 FYLIQDQYGNYVMQHILERGSSKDREAILEVVLGSVVNFSKHKFASNVIEKCIKFGTVKQ 663
Query: 328 RERLVAEII--------------ANALLLAEDCYGNYVVQHLL 356
+ R++ E++ + L+ +D Y NYV+Q L+
Sbjct: 664 KRRILDEVMLGNEDPTVETVSDESPLALMMKDQYANYVIQKLV 706
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
+Y L ++ + D+ G +Q + + ++E + EI + L D +GNYV+
Sbjct: 413 EYHLKDIYGHAVEFTKDQHGSRFIQQKLPTASNEEKEVIFNEIRETSYELMTDVFGNYVI 472
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q LL+ + GH S YG VV+R LE+ + + +II+ LR +
Sbjct: 473 QKYFEYGNNTQKQVLLKFMIGHIYELSLQMYGCRVVQRA-LEAVDLKGQILIIDELRD-H 530
Query: 413 VSMLLMHPFGNYVIQSAL 430
+ + GN+VIQ ++
Sbjct: 531 ILVCAKDQNGNHVIQKSI 548
>gi|190348753|gb|EDK41273.2| hypothetical protein PGUG_05371 [Meyerozyma guilliermondii ATCC
6260]
Length = 761
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 158/292 (54%), Gaps = 16/292 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+ V KDQ+G R +Q+ + + EE E+IF E+ + ELM D FGNYV+QK
Sbjct: 416 LKDIYGHAVEFTKDQHGSRFIQQKLPTASNEEKEVIFNEIRETSYELMTDVFGNYVIQKY 475
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + Q+ +L + ++L L +G R V + LE + QIS++ LR
Sbjct: 476 FEYGNNTQKQVLLKFMIGHIYEL---SLQMYGCRVVQRALEAVDLKGQISII-DELRDHI 531
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ ++ + ++++ + D Y ++T GC V+Q +EY+ +
Sbjct: 532 LVCAKDQNGNHVIQKSIEKIPFSEITFIMDSLEDQIYHLSTHPYGCRVIQRLLEYADPKR 591
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ ++ E+ L +D YGNYV+QH+L + ++L + G V+FS +K+ SNV
Sbjct: 592 QQEMLDELNRFIFYLIQDQYGNYVMQHILERGSSKDREAILEVVLGSVVNFSKHKFASNV 651
Query: 388 VERCLLESGEEQSTRIIIELL---RSPNV---------SMLLMHPFGNYVIQ 427
+E+C+ +Q RI+ E++ P V ++++ + NYVIQ
Sbjct: 652 IEKCIKFGTVKQKRRILDEVMLGNEDPTVETVSDESPLALMMKDQYANYVIQ 703
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 109/223 (48%), Gaps = 18/223 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+ + G+I L+ YGCR +QR + ++ + I E+ D + D GN+V+QK
Sbjct: 488 LKFMIGHIYELSLQMYGCRVVQRALEAVDLKGQISIIDELRDHILVCAKDQNGNHVIQKS 547
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E + T I+ L + Q+ + + +G R + +LLE +P++ +L L
Sbjct: 548 IEKIPFSEITFIMDSLED---QIYHLSTHPYGCRVIQRLLE-YADPKRQQEMLDELNRFI 603
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
L +D G+YV+Q+ ++ S +D + +L V + + K V++ C+++ Q
Sbjct: 604 FYLIQDQYGNYVMQHILERGSSKDREAILEVVLGSVVNFSKHKFASNVIEKCIKFGTVKQ 663
Query: 328 RERLVAEII--------------ANALLLAEDCYGNYVVQHLL 356
+ R++ E++ + L+ +D Y NYV+Q L+
Sbjct: 664 KRRILDEVMLGNEDPTVETVSDESPLALMMKDQYANYVIQKLV 706
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 2/138 (1%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
+Y L ++ + D+ G +Q + + ++E + EI + L D +GNYV+
Sbjct: 413 EYHLKDIYGHAVEFTKDQHGSRFIQQKLPTASNEEKEVIFNEIRETSYELMTDVFGNYVI 472
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q LL+ + GH S YG VV+R LE+ + + II+ LR +
Sbjct: 473 QKYFEYGNNTQKQVLLKFMIGHIYELSLQMYGCRVVQRA-LEAVDLKGQISIIDELRD-H 530
Query: 413 VSMLLMHPFGNYVIQSAL 430
+ + GN+VIQ ++
Sbjct: 531 ILVCAKDQNGNHVIQKSI 548
>gi|5106561|gb|AAD39751.1|AF128626_1 RNA binding protein PufA [Dictyostelium discoideum]
Length = 795
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 169/306 (55%), Gaps = 14/306 (4%)
Query: 135 RNQWLQDSFDCS---SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRV 191
R+Q L+D + L D++G+I +KDQ G R +Q+ + + EE +++F EV+ V
Sbjct: 451 RSQLLEDFRNLKMKLELSDIKGHIAEFSKDQVGSRIIQQKIENASLEEKQLVFDEVVVAV 510
Query: 192 CELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLT 251
LM D FGNYV+QK E + EQ+ + L+ ++ + L +G R + K +E++
Sbjct: 511 HSLMTDVFGNYVLQKFFEHGTTEQKRILADKLSG---HILSLTLQMYGCRVIQKAIESIE 567
Query: 252 NPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKS 311
+QI L++ L V D NG++VIQ C++ +++++ + Y +AT
Sbjct: 568 LDKQI-LLIGELNGHIVQCVTDQNGNHVIQKCIEKIPTHLIQFIIDSFHGHIYQLATHPY 626
Query: 312 GCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQL 371
GC V+Q +E+ Q ++ E++ A+ L +D YGNYV+QH+L P+ ++++ +L
Sbjct: 627 GCRVIQRILEHCAEKQVAPILDELMRCAVSLVQDQYGNYVIQHVLENGTPRDKSAIVCKL 686
Query: 372 EGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLMH----PFGNY 424
+G + S +K+ SNV+E+C+ + II E+L SPN S +L+ P+ NY
Sbjct: 687 QGQIYNLSQHKFASNVIEKCVQHGCTAERILIINEILGDANSPNSSNVLLKILKDPYANY 746
Query: 425 VIQSAL 430
VIQ L
Sbjct: 747 VIQKIL 752
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 131/258 (50%), Gaps = 28/258 (10%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G+I++L YGCR +Q+ + S+ ++ ++ E+ + + + D GN+V+QK
Sbjct: 542 LSGHILSLTLQMYGCRVIQKAIESIELDKQILLIGELNGHIVQCVTDQNGNHVIQK---- 597
Query: 211 CSEEQRTRILLMLTNDDFQ--LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C E+ T ++ + D F + ++ + +G R + ++LE+ +Q++ +L L AV
Sbjct: 598 CIEKIPTHLIQFII-DSFHGHIYQLATHPYGCRVIQRILEHCAE-KQVAPILDELMRCAV 655
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
+L +D G+YVIQ+ +++ + D ++ ++ Y ++ K V++ CV++ A+R
Sbjct: 656 SLVQDQYGNYVIQHVLENGTPRDKSAIVCKLQGQIYNLSQHKFASNVIEKCVQHGCTAER 715
Query: 329 ERLVAEIIANA---------LLLAEDCYGNYVVQHLLAL-----------RVPQITASLL 368
++ EI+ +A L + +D Y NYV+Q +L + R+ +L
Sbjct: 716 ILIINEILGDANSPNSSNVLLKILKDPYANYVIQKILDIVEPAQRDMIINRIQPFVPTLK 775
Query: 369 RQLEGHYVSFSCNKYGSN 386
+ G ++ KY +N
Sbjct: 776 KVTPGKHIISRIEKYSAN 793
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 73/159 (45%), Gaps = 2/159 (1%)
Query: 272 KDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERL 331
+ TN + ++ F + K L+++ + + D+ G ++Q +E + +++ +
Sbjct: 443 QQTNEYTTRSQLLEDFRNLKMKLELSDIKGHIAEFSKDQVGSRIIQQKIENASLEEKQLV 502
Query: 332 VAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERC 391
E++ L D +GNYV+Q + L +L GH +S + YG V+++
Sbjct: 503 FDEVVVAVHSLMTDVFGNYVLQKFFEHGTTEQKRILADKLSGHILSLTLQMYGCRVIQKA 562
Query: 392 LLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ES E ++I L ++ + GN+VIQ +
Sbjct: 563 -IESIELDKQILLIGELNG-HIVQCVTDQNGNHVIQKCI 599
>gi|66814744|ref|XP_641551.1| RNA binding protein [Dictyostelium discoideum AX4]
gi|60469557|gb|EAL67547.1| RNA binding protein [Dictyostelium discoideum AX4]
Length = 785
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 169/306 (55%), Gaps = 14/306 (4%)
Query: 135 RNQWLQDSFDCS---SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRV 191
R+Q L+D + L D++G+I +KDQ G R +Q+ + + EE +++F EV+ V
Sbjct: 441 RSQLLEDFRNLKMKLELSDIKGHIAEFSKDQVGSRIIQQKIENASLEEKQLVFDEVVVAV 500
Query: 192 CELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLT 251
LM D FGNYV+QK E + EQ+ + L+ ++ + L +G R + K +E++
Sbjct: 501 HSLMTDVFGNYVLQKFFEHGTTEQKRILADKLSG---HILSLTLQMYGCRVIQKAIESIE 557
Query: 252 NPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKS 311
+QI L++ L V D NG++VIQ C++ +++++ + Y +AT
Sbjct: 558 LDKQI-LLIGELNGHIVQCVTDQNGNHVIQKCIEKIPTHLIQFIIDSFHGHIYQLATHPY 616
Query: 312 GCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQL 371
GC V+Q +E+ Q ++ E++ A+ L +D YGNYV+QH+L P+ ++++ +L
Sbjct: 617 GCRVIQRILEHCAEKQVAPILDELMRCAVSLVQDQYGNYVIQHVLENGTPRDKSAIVCKL 676
Query: 372 EGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLMH----PFGNY 424
+G + S +K+ SNV+E+C+ + II E+L SPN S +L+ P+ NY
Sbjct: 677 QGQIYNLSQHKFASNVIEKCVQHGCTAERILIINEILGDANSPNSSNVLLKILKDPYANY 736
Query: 425 VIQSAL 430
VIQ L
Sbjct: 737 VIQKIL 742
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 131/258 (50%), Gaps = 28/258 (10%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G+I++L YGCR +Q+ + S+ ++ ++ E+ + + + D GN+V+QK
Sbjct: 532 LSGHILSLTLQMYGCRVIQKAIESIELDKQILLIGELNGHIVQCVTDQNGNHVIQK---- 587
Query: 211 CSEEQRTRILLMLTNDDFQ--LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C E+ T ++ + D F + ++ + +G R + ++LE+ +Q++ +L L AV
Sbjct: 588 CIEKIPTHLIQFII-DSFHGHIYQLATHPYGCRVIQRILEHCAE-KQVAPILDELMRCAV 645
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
+L +D G+YVIQ+ +++ + D ++ ++ Y ++ K V++ CV++ A+R
Sbjct: 646 SLVQDQYGNYVIQHVLENGTPRDKSAIVCKLQGQIYNLSQHKFASNVIEKCVQHGCTAER 705
Query: 329 ERLVAEIIANA---------LLLAEDCYGNYVVQHLLAL-----------RVPQITASLL 368
++ EI+ +A L + +D Y NYV+Q +L + R+ +L
Sbjct: 706 ILIINEILGDANSPNSSNVLLKILKDPYANYVIQKILDIVEPAQRDMIINRIQPFVPTLK 765
Query: 369 RQLEGHYVSFSCNKYGSN 386
+ G ++ KY +N
Sbjct: 766 KVTPGKHIISRIEKYSAN 783
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 73/159 (45%), Gaps = 2/159 (1%)
Query: 272 KDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERL 331
+ TN + ++ F + K L+++ + + D+ G ++Q +E + +++ +
Sbjct: 433 QQTNEYTTRSQLLEDFRNLKMKLELSDIKGHIAEFSKDQVGSRIIQQKIENASLEEKQLV 492
Query: 332 VAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERC 391
E++ L D +GNYV+Q + L +L GH +S + YG V+++
Sbjct: 493 FDEVVVAVHSLMTDVFGNYVLQKFFEHGTTEQKRILADKLSGHILSLTLQMYGCRVIQKA 552
Query: 392 LLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ES E ++I L ++ + GN+VIQ +
Sbjct: 553 -IESIELDKQILLIGELNG-HIVQCVTDQNGNHVIQKCI 589
>gi|357143524|ref|XP_003572951.1| PREDICTED: pumilio homolog 4-like [Brachypodium distachyon]
Length = 1010
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 162/317 (51%), Gaps = 17/317 (5%)
Query: 127 WMSSLSLKRNQW---LQDSFDCSSLR-----DLRGNIVALAKDQYGCRHLQRTMSSLPKE 178
W S L N + L + F + R D+ G++V + DQYG R +Q+ + + E
Sbjct: 643 WSSENGLIDNGYGSSLLEEFKTNKTRSFELLDIVGHVVEFSSDQYGSRFIQQKLETASTE 702
Query: 179 EIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH 238
E IF E++ + LM D FGNYV+QK E +E Q+ ++ +L QL L +
Sbjct: 703 EKNTIFPEILPQARTLMTDVFGNYVIQKFFEYGTEAQKKQLASLLKGYVLQL---SLQMY 759
Query: 239 GIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNE 298
G R + K LE + Q + L L + +D NG++VIQ C++ E +++++
Sbjct: 760 GCRVIQKALEVVGVEHQTQMALE-LDGSIMKCVRDQNGNHVIQKCIECIPQERIQFIISA 818
Query: 299 VADNCYGIATDKSGCCVLQHCVEY-SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLA 357
+ ++T GC V+Q +E+ + + ++ EI+ + + L +D YGNYV+QH+L
Sbjct: 819 FYGHVVDLSTHPYGCRVIQRVLEHCDDESTQNAMMEEIMQSVVPLTQDQYGNYVIQHVLQ 878
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN----V 413
P+ S++ QL G V S K+ SNVVE+CL E+ +I E+L + + +
Sbjct: 879 YGKPEERTSIITQLAGQIVKMSQQKFASNVVEKCLSFGSHEERQILINEMLGTTDENEPL 938
Query: 414 SMLLMHPFGNYVIQSAL 430
++ F NYV+Q L
Sbjct: 939 QAMMKDQFANYVVQKVL 955
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 102/234 (43%), Gaps = 5/234 (2%)
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVL 260
Y L E + + R+ LL + +V + +G R + + LE + ++ + +
Sbjct: 653 GYGSSLLEEFKTNKTRSFELLDIVG---HVVEFSSDQYGSRFIQQKLETAST-EEKNTIF 708
Query: 261 AALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCV 320
+ P A TL D G+YVIQ ++ + K L + + ++ GC V+Q +
Sbjct: 709 PEILPQARTLMTDVFGNYVIQKFFEYGTEAQKKQLASLLKGYVLQLSLQMYGCRVIQKAL 768
Query: 321 EYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSC 380
E + ++ E+ + + D GN+V+Q + + ++ GH V S
Sbjct: 769 EVVGVEHQTQMALELDGSIMKCVRDQNGNHVIQKCIECIPQERIQFIISAFYGHVVDLST 828
Query: 381 NKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
+ YG V++R L +E + ++E + +V L +GNYVIQ L K
Sbjct: 829 HPYGCRVIQRVLEHCDDESTQNAMMEEIMQ-SVVPLTQDQYGNYVIQHVLQYGK 881
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE--- 193
Q+ + S + L G IV +++ ++ +++ +S EE +++ E++ E
Sbjct: 878 QYGKPEERTSIITQLAGQIVKMSQQKFASNVVEKCLSFGSHEERQILINEMLGTTDENEP 937
Query: 194 ---LMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
+M D F NYVVQK++E C + R IL + L R H + V KL+
Sbjct: 938 LQAMMKDQFANYVVQKVLETCDDHNRELILSRIKVHLNALKRYTYGKHIVARVEKLI 994
>gi|225434877|ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
Length = 1065
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 158/291 (54%), Gaps = 9/291 (3%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
C L ++ G++V + DQYG R +Q+ + + EE M++ E+I + LM D FGNYV+
Sbjct: 725 CFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIIPQALSLMTDVFGNYVI 784
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK E QR + L ++ + L +G R + K +E + Q+I +V L
Sbjct: 785 QKFFEHGLVSQRRELAGKLYG---HVLTLSLQMYGCRVIQKAIEVVDPDQKIKMV-EELD 840
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+ +D NG++VIQ C++ + +++++ D ++T GC V+Q +E+ +
Sbjct: 841 GHIMRCVRDQNGNHVIQKCIECVPEDAIQFIISTFFDQVVTLSTHPYGCRVIQRVLEHCR 900
Query: 325 GAQRE-RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+ + +++ EI+ + +LA+D YGNYVVQH+L P ++++++L G V S K+
Sbjct: 901 DPKTQSKVMDEILGSVSMLAQDQYGNYVVQHVLEHGQPHERSAIIKELAGKIVQMSQQKF 960
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
SNVVE+CL G + ++ E+L + + + ++ F NYV+Q L
Sbjct: 961 ASNVVEKCLTFGGPAERQILVNEMLGTTDENEPLQAMMKDQFANYVVQKVL 1011
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE + + L+ + V + D G IQ ++ + E+ + E+
Sbjct: 714 LLEEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIIPQALS 773
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ +QR L ++ + L L+ YG V+Q + + P
Sbjct: 774 LMTDVFGNYVIQKFFEHGLVSQRRELAGKLYGHVLTLSLQMYGCRVIQKAIEVVDPDQKI 833
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++ +L+GH + ++ G++V+++C +E E + + II V L HP+G V
Sbjct: 834 KMVEELDGHIMRCVRDQNGNHVIQKC-IECVPEDAIQFIISTFFD-QVVTLSTHPYGCRV 891
Query: 426 IQSAL 430
IQ L
Sbjct: 892 IQRVL 896
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L G IV +++ ++ +++ ++ E +++ E++ E +M D F N
Sbjct: 945 IKELAGKIVQMSQQKFASNVVEKCLTFGGPAERQILVNEMLGTTDENEPLQAMMKDQFAN 1004
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 1005 YVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIVARVEKLV 1050
>gi|356542325|ref|XP_003539618.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1033
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 155/291 (53%), Gaps = 9/291 (3%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
C L ++ G++V + DQYG R +Q+ + + EE M++ E++ LM D FGNYVV
Sbjct: 692 CFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVV 751
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK E Q+ + L ++ + L +G R + K +E + Q+I +V L
Sbjct: 752 QKFFEHGLASQKRELANKLLG---HVLALSLQMYGCRVIQKAIEVVDLDQKIEMV-QELD 807
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+ +D NG++VIQ C++ + ++++ D ++T GC V+Q +E+ K
Sbjct: 808 GNVMRCVRDQNGNHVIQKCIECVPEDAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCK 867
Query: 325 G-AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+++++ EI+ +LA+D YGNYVVQH+L P +S++++L G V S K+
Sbjct: 868 DPTTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSSIIKELAGKIVQMSQQKF 927
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
SNVVE+CL G + ++ E+L + + + ++ F NYV+Q L
Sbjct: 928 ASNVVEKCLTFGGPSERQLLVCEMLGTTDENEPLQAMMKDQFANYVVQKVL 978
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 284 VKHFSHEDTK-YLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLL 342
++ F TK + L+E+A + + D+ G +Q +E + ++ + EI+ +AL L
Sbjct: 682 LEEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALAL 741
Query: 343 AEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTR 402
D +GNYVVQ + L +L GH ++ S YG V+++ + +Q
Sbjct: 742 MTDVFGNYVVQKFFEHGLASQKRELANKLLGHVLALSLQMYGCRVIQKAIEVVDLDQKIE 801
Query: 403 IIIELLRSPNVSMLLMHPFGNYVIQ 427
++ EL NV + GN+VIQ
Sbjct: 802 MVQEL--DGNVMRCVRDQNGNHVIQ 824
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE + + L+ + V + D G IQ ++ + E+ + E+ +
Sbjct: 681 LLEEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALA 740
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ +Q+ L +++ + L L+ YG V+Q + +
Sbjct: 741 LMTDVFGNYVVQKFFEHGLASQKRELANKLLGHVLALSLQMYGCRVIQKAIEVVDLDQKI 800
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++++L+G+ + ++ G++V+++C +E E + I+ V L HP+G V
Sbjct: 801 EMVQELDGNVMRCVRDQNGNHVIQKC-IECVPEDAIHFIVSTFFD-QVVTLSTHPYGCRV 858
Query: 426 IQSAL 430
IQ L
Sbjct: 859 IQRVL 863
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDP 198
S +++L G IV +++ ++ +++ ++ E +++ E++ E +M D
Sbjct: 909 SSIIKELAGKIVQMSQQKFASNVVEKCLTFGGPSERQLLVCEMLGTTDENEPLQAMMKDQ 968
Query: 199 FGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
F NYVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 969 FANYVVQKVLETCDDQQRELILYRIKVHLNALKKYTYGKHIVARVEKLV 1017
>gi|297803524|ref|XP_002869646.1| hypothetical protein ARALYDRAFT_913980 [Arabidopsis lyrata subsp.
lyrata]
gi|297315482|gb|EFH45905.1| hypothetical protein ARALYDRAFT_913980 [Arabidopsis lyrata subsp.
lyrata]
Length = 858
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 161/309 (52%), Gaps = 21/309 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G+IV + DQ+G R +Q+ + + EE +F E++ C+LM D FGNYV+QK
Sbjct: 528 LSDITGHIVEFSADQHGSRFIQQKLENCKLEEKAAVFREILPHACKLMTDVFGNYVIQKF 587
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + QR + L Q+V + L +G R + K L+ + Q++ L L
Sbjct: 588 FEYGNSAQRKELADQLMG---QIVPLSLQMYGCRVIQKALDVIEPDQRVRLA-RELDGQV 643
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ C+++ + ++L+ ++ GC V+Q +E
Sbjct: 644 MRCVRDQNGNHVIQKCIENIPADRVGFMLHAFRGQVSSLSMHPYGCRVIQRLLERCSHDH 703
Query: 328 RERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ R + EI+ + +L++D YGNYV QH+L + ++R+L GH V S +K+ SN
Sbjct: 704 QCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIVRKLSGHIVQLSLHKFASN 763
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVS-----MLLMHPFGNYVIQS----------ALL 431
V+E+C LE G +II+ + P+ S M++ +GNYV+Q A L
Sbjct: 764 VIEKC-LEYGGRIERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRATL 822
Query: 432 VSKVRLFSS 440
S+VR+ +S
Sbjct: 823 FSRVRMHAS 831
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 122/246 (49%), Gaps = 9/246 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G IV L+ YGCR +Q+ + + ++ + E+ +V + D GN+V+QK +E
Sbjct: 603 LMGQIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDGQVMRCVRDQNGNHVIQKCIEN 662
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ R+ ML Q+ + ++ +G R + +LLE ++ Q + + L
Sbjct: 663 IPAD---RVGFMLHAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILESVCVL 719
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+KD G+YV Q+ ++ + E+ + ++ +++ + ++ K V++ C+EY +R+
Sbjct: 720 SKDQYGNYVTQHVLEKGTSEERERIVRKLSGHIVQLSLHKFASNVIEKCLEYGGRIERDL 779
Query: 331 LVAEIIA------NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
++ EI + L++ +D YGNYVVQ + A+L ++ H + YG
Sbjct: 780 IIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRATLFSRVRMHASALKKYTYG 839
Query: 385 SNVVER 390
++V R
Sbjct: 840 KHIVTR 845
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LE L + + L+ + V + D +G IQ +++ E+ + E+ +
Sbjct: 514 FLEELKSGKGRRFDLSDITGHIVEFSADQHGSRFIQQKLENCKLEEKAAVFREILPHACK 573
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q EY AQR+ L +++ + L+ YG V+Q L + P
Sbjct: 574 LMTDVFGNYVIQKFFEYGNSAQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQRV 633
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
L R+L+G + ++ G++V+++C +E+ ++ R VS L MHP+G V
Sbjct: 634 RLARELDGQVMRCVRDQNGNHVIQKC-IENIPADRVGFMLHAFRG-QVSSLSMHPYGCRV 691
Query: 426 IQSAL 430
IQ L
Sbjct: 692 IQRLL 696
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 89/219 (40%), Gaps = 18/219 (8%)
Query: 224 TNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK----------- 272
+N + + +N +GI+ + ++ P Q+ L PG V +
Sbjct: 448 SNSNMGRTGMGVNYYGIQPNMGIMVQYL-PTQLG---PPLSPGPVPYVEAYPGWQPQGSL 503
Query: 273 -DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERL 331
NG + + + S + ++ L+++ + + D+ G +Q +E K ++ +
Sbjct: 504 EGANGPRLCNFLEELKSGKGRRFDLSDITGHIVEFSADQHGSRFIQQKLENCKLEEKAAV 563
Query: 332 VAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERC 391
EI+ +A L D +GNYV+Q L QL G V S YG V+++
Sbjct: 564 FREILPHACKLMTDVFGNYVIQKFFEYGNSAQRKELADQLMGQIVPLSLQMYGCRVIQKA 623
Query: 392 LLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
L +Q R+ EL V + GN+VIQ +
Sbjct: 624 LDVIEPDQRVRLAREL--DGQVMRCVRDQNGNHVIQKCI 660
>gi|224112727|ref|XP_002316273.1| predicted protein [Populus trichocarpa]
gi|222865313|gb|EEF02444.1| predicted protein [Populus trichocarpa]
Length = 938
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 157/291 (53%), Gaps = 9/291 (3%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
C L ++ G++V + DQYG R +Q+ + + EE M+F E++ + LM D FGNYV+
Sbjct: 610 CFELSEIAGHVVEFSADQYGSRFIQQKLETAMTEEKNMVFDEIMPQALSLMTDVFGNYVI 669
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK E S Q + LT ++ + L +G R + K +E + QQ +V L
Sbjct: 670 QKFFEHGSASQIRELADQLTG---HVLTLSLQMYGCRVIQKAIEVVELDQQTKMV-TELD 725
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+ +D NG++VIQ C++ + +++++ D ++T GC V+Q +E+ +
Sbjct: 726 GHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVSTFYDQVVTLSTHPYGCRVIQRVLEHCQ 785
Query: 325 GAQRER-LVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+ +R ++ EI+ + +LA+D YGNYVVQH+L P ++++++L G V S K+
Sbjct: 786 DTKTQRIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKF 845
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
SNV+E+CL + ++ E+L + + + ++ F NYV+Q L
Sbjct: 846 ASNVIEKCLTFGTPAERQALVDEMLGTTDENEPLQAMMKDQFANYVVQKVL 896
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 284 VKHFSHEDTK-YLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLL 342
++ F T+ + L+E+A + + D+ G +Q +E + ++ + EI+ AL L
Sbjct: 600 LEEFKSNKTRCFELSEIAGHVVEFSADQYGSRFIQQKLETAMTEEKNMVFDEIMPQALSL 659
Query: 343 AEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTR 402
D +GNYV+Q L QL GH ++ S YG V+++ + +Q T+
Sbjct: 660 MTDVFGNYVIQKFFEHGSASQIRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTK 719
Query: 403 IIIELLRSPNVSMLLMHPFGNYVIQ 427
++ EL ++ + GN+VIQ
Sbjct: 720 MVTEL--DGHIMRCVRDQNGNHVIQ 742
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE + + L+ + V + D G IQ ++ E+ + +E+
Sbjct: 599 LLEEFKSNKTRCFELSEIAGHVVEFSADQYGSRFIQQKLETAMTEEKNMVFDEIMPQALS 658
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ +Q L ++ + L L+ YG V+Q + +
Sbjct: 659 LMTDVFGNYVIQKFFEHGSASQIRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQT 718
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++ +L+GH + ++ G++V+++C +E E + + I+ V L HP+G V
Sbjct: 719 KMVTELDGHIMRCVRDQNGNHVIQKC-IECVPEDAIQFIVSTFYD-QVVTLSTHPYGCRV 776
Query: 426 IQSAL 430
IQ L
Sbjct: 777 IQRVL 781
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
++ L G IV +++ ++ +++ ++ E + + E++ E +M D F N
Sbjct: 830 IKKLTGQIVQMSQQKFASNVIEKCLTFGTPAERQALVDEMLGTTDENEPLQAMMKDQFAN 889
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++Q IL + L + H + V KL+
Sbjct: 890 YVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLV 935
>gi|225443381|ref|XP_002266669.1| PREDICTED: pumilio homolog 5 [Vitis vinifera]
gi|297735758|emb|CBI18445.3| unnamed protein product [Vitis vinifera]
Length = 1053
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 155/292 (53%), Gaps = 11/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G V + DQ+G R +Q+ + + EE +F EV+ LM D FGNYV+QK
Sbjct: 695 LSDIAGRTVEFSVDQHGSRFIQQKLENCSGEEKASVFKEVLPHASRLMTDVFGNYVIQKF 754
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQR + L Q++ + L +G R + K LE + Q+ LV L
Sbjct: 755 FEHGTPEQRRELAYQLAG---QMIPLSLQMYGCRVIQKALEVIELDQKTQLV-HELDGHV 810
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGA 326
+ +D NG++VIQ C++ E ++++ +++ GC V+Q +E+ S+ +
Sbjct: 811 IRCVRDQNGNHVIQKCIECIPTEKIGFIISAFKGQVTVLSSHPYGCRVIQRVLEHCSEVS 870
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q + +V EI+ +A +LAED YGNYV QH+L P + ++ +L G V S +KY SN
Sbjct: 871 QSQFIVDEILESAYVLAEDQYGNYVTQHVLERGNPHERSQIISKLTGKIVQMSQHKYASN 930
Query: 387 VVERCLLESGEEQSTRIIIELL-----RSPNVSMLLMHPFGNYVIQSALLVS 433
V+E+C LE G ++IE + + N+ +++ F NYV+Q L S
Sbjct: 931 VIEKC-LEYGSTSECELLIEEIIGQSEDNDNLLVMMKDQFANYVVQKILETS 981
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
K+ L+++A + D+ G +Q +E G ++ + E++ +A L D +GNYV+
Sbjct: 692 KFELSDIAGRTVEFSVDQHGSRFIQQKLENCSGEEKASVFKEVLPHASRLMTDVFGNYVI 751
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q P+ L QL G + S YG V+++ L +Q T+++ EL +
Sbjct: 752 QKFFEHGTPEQRRELAYQLAGQMIPLSLQMYGCRVIQKALEVIELDQKTQLVHEL--DGH 809
Query: 413 VSMLLMHPFGNYVIQ 427
V + GN+VIQ
Sbjct: 810 VIRCVRDQNGNHVIQ 824
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LE L + L+ + V + D +G IQ +++ S E+ + EV +
Sbjct: 681 FLEELKSNNARKFELSDIAGRTVEFSVDQHGSRFIQQKLENCSGEEKASVFKEVLPHASR 740
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ QR L ++ + L+ YG V+Q L +
Sbjct: 741 LMTDVFGNYVIQKFFEHGTPEQRRELAYQLAGQMIPLSLQMYGCRVIQKALEVIELDQKT 800
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
L+ +L+GH + ++ G++V+++C +E + II + V++L HP+G V
Sbjct: 801 QLVHELDGHVIRCVRDQNGNHVIQKC-IECIPTEKIGFIISAFKG-QVTVLSSHPYGCRV 858
Query: 426 IQSAL 430
IQ L
Sbjct: 859 IQRVL 863
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI------DRVCELMIDPFGN 201
+ L G IV +++ +Y +++ + E E++ E+I D + +M D F N
Sbjct: 912 ISKLTGKIVQMSQHKYASNVIEKCLEYGSTSECELLIEEIIGQSEDNDNLLVMMKDQFAN 971
Query: 202 YVVQKLVELCSEEQRTRIL 220
YVVQK++E +++QR +L
Sbjct: 972 YVVQKILETSNDKQREILL 990
>gi|147775244|emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera]
Length = 1039
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 158/291 (54%), Gaps = 9/291 (3%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
C L ++ G++V + DQYG R +Q+ + + EE M++ E+I + LM D FGNYV+
Sbjct: 699 CFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIIPQALSLMTDVFGNYVI 758
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK E QR + L ++ + L +G R + K +E + Q+I +V L
Sbjct: 759 QKFFEHGLVSQRRELAGKLYG---HVLTLSLQMYGCRVIQKAIEVVDPDQKIKMV-EELD 814
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+ +D NG++VIQ C++ + +++++ D ++T GC V+Q +E+ +
Sbjct: 815 GHIMRCVRDQNGNHVIQKCIECVPEDAIQFIISTFFDQVVTLSTHPYGCRVIQRVLEHCR 874
Query: 325 GAQRE-RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+ + +++ EI+ + +LA+D YGNYVVQH+L P ++++++L G V S K+
Sbjct: 875 DPKTQSKVMDEILGSVSMLAQDQYGNYVVQHVLEHGQPHERSAIIKELAGKIVQMSQQKF 934
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
SNVVE+CL G + ++ E+L + + + ++ F NYV+Q L
Sbjct: 935 ASNVVEKCLTFGGPAERQILVNEMLGTTDENEPLQAMMKDQFANYVVQKVL 985
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE + + L+ + V + D G IQ ++ + E+ + E+
Sbjct: 688 LLEEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIIPQALS 747
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ +QR L ++ + L L+ YG V+Q + + P
Sbjct: 748 LMTDVFGNYVIQKFFEHGLVSQRRELAGKLYGHVLTLSLQMYGCRVIQKAIEVVDPDQKI 807
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++ +L+GH + ++ G++V+++C +E E + + II V L HP+G V
Sbjct: 808 KMVEELDGHIMRCVRDQNGNHVIQKC-IECVPEDAIQFIISTFFD-QVVTLSTHPYGCRV 865
Query: 426 IQSAL 430
IQ L
Sbjct: 866 IQRVL 870
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L G IV +++ ++ +++ ++ E +++ E++ E +M D F N
Sbjct: 919 IKELAGKIVQMSQQKFASNVVEKCLTFGGPAERQILVNEMLGTTDENEPLQAMMKDQFAN 978
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 979 YVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIVARVEKLV 1024
>gi|392566810|gb|EIW59985.1| ARM repeat-containing protein [Trametes versicolor FP-101664 SS1]
Length = 378
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 160/293 (54%), Gaps = 13/293 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR-VCELMIDPFGNYVVQK 206
LRD+ G IV + DQ+G R +Q+ + S EE+E+IF E++ + +LM D FGNYVVQK
Sbjct: 19 LRDIFGYIVEFSGDQHGSRFIQQKLESATSEEMEIIFDEIVPQYAIQLMQDVFGNYVVQK 78
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
+ E + Q+ R++ + Q++ + L +G R V K +E++ QQ+ L + L P
Sbjct: 79 MFEYGTSAQKARLVATMEG---QILGLSLQMYGCRVVQKAIEHILPEQQV-LFVQELGPN 134
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++VIQ ++H + D + + Y ++T GC VLQ C EY
Sbjct: 135 VLRCVKDANGNHVIQKLIEHVA-PDRLAFVTAFRGSVYDLSTHPYGCRVLQRCFEYMPED 193
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q L+ E+ L D +GNYVVQ +L PQ A ++ +L G + + +K+ SN
Sbjct: 194 QTRPLLDELHKYVPNLMIDQFGNYVVQFVLEHGRPQDRAMIISKLTGQMYNMAKHKFASN 253
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSALLVS 433
V E+ L+ + +S R +I+ + +P + L+ FGNYV+Q AL V+
Sbjct: 254 VCEKALV-CADPESRRQLIDEIMTPKQDGLSPIMGLMKDSFGNYVLQRALTVA 305
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 115/260 (44%), Gaps = 23/260 (8%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+ G I+ L+ YGCR +Q+ + + E+ + E+ V + D GN+V+QKL+E
Sbjct: 95 MEGQILGLSLQMYGCRVVQKAIEHILPEQQVLFVQELGPNVLRCVKDANGNHVIQKLIEH 154
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ ++ L +T + + + +G R + + E + Q L L L L
Sbjct: 155 VAPDR----LAFVTAFRGSVYDLSTHPYGCRVLQRCFEYMPEDQTRPL-LDELHKYVPNL 209
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
D G+YV+Q+ ++H +D +++++ Y +A K V + + + R +
Sbjct: 210 MIDQFGNYVVQFVLEHGRPQDRAMIISKLTGQMYNMAKHKFASNVCEKALVCADPESRRQ 269
Query: 331 LVAEI-------IANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVS------ 377
L+ EI ++ + L +D +GNYV+Q L + L+ ++ H V+
Sbjct: 270 LIDEIMTPKQDGLSPIMGLMKDSFGNYVLQRALTVADADQKELLISKVRPHLVNMRRYSS 329
Query: 378 -----FSCNKYGSNVVERCL 392
S + Y +V CL
Sbjct: 330 AYSKHLSASTYTCGIVMTCL 349
>gi|413950241|gb|AFW82890.1| hypothetical protein ZEAMMB73_959107 [Zea mays]
Length = 869
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 180/362 (49%), Gaps = 24/362 (6%)
Query: 84 FSHPCQEAEPINQDSSILNLLHNHNF-DGLRSNGNELSSVPRNQWMSSLSLKRNQWLQDS 142
+ P + PI S + + N F G+R+ GN S W S + K + L S
Sbjct: 462 LASPVLPSSPIAPGSPLRHGERNMRFPSGMRNFGNSFGS-----WNSGMGGKMDANLMPS 516
Query: 143 F---------DCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE 193
L ++ G++V + DQYG R +Q+ + + EE +M+F E++ +
Sbjct: 517 LLEEFKSNKSKSYELSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALT 576
Query: 194 LMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNP 253
LM D FGNYVVQK E S Q + L +++ + L +G R + K +E +
Sbjct: 577 LMTDVFGNYVVQKFFEHGSTAQIKELAGQLIG---RVLALSLQMYGCRVIQKAIEVVDLE 633
Query: 254 QQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGC 313
Q +V A L + +D NG++VIQ C++ +++++ ++T GC
Sbjct: 634 LQTKMV-AELEGHVMRCVRDQNGNHVIQKCIECIPQHAIEFIISTFYGQVVMLSTHPYGC 692
Query: 314 CVLQHCVEYSKGAQRERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLE 372
V+Q +E+ + ++++ EI+ + LLA+D YGNYVVQH+L P ++++ +L
Sbjct: 693 RVIQRVLEHCDDPKTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLI 752
Query: 373 GHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVS----MLLMHPFGNYVIQS 428
G V S K+ SNV+E+CL+ + +I E+L S + S +++ FGNYV+Q
Sbjct: 753 GQIVQMSQQKFASNVIEKCLVFGNPVERQVLIGEMLGSTSESEPLEVMMKDQFGNYVVQK 812
Query: 429 AL 430
L
Sbjct: 813 VL 814
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ + E +++ E++ E +M D FGN
Sbjct: 748 IEKLIGQIVQMSQQKFASNVIEKCLVFGNPVERQVLIGEMLGSTSESEPLEVMMKDQFGN 807
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 808 YVVQKVLETCDDQQREMILTRIKTHLNTLKKYTYGKHIVARVEKLV 853
>gi|356533951|ref|XP_003535521.1| PREDICTED: pumilio homolog 4-like [Glycine max]
Length = 983
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 153/288 (53%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ ++V + DQYG R +Q+ + + EE IF E+I LM D FGNYV+QK
Sbjct: 650 LPDIIDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEIIPHARALMTDVFGNYVIQKF 709
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E +E QR + LT ++ + L +G R + K LE + QQ +V + L
Sbjct: 710 FEHGTESQRKELANQLTG---HVLPLSLQMYGCRVIQKALEVVDVDQQGQMV-SELNGAI 765
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ C++ + +++++ ++T GC V+Q +E+
Sbjct: 766 MKCVRDQNGNHVIQKCIECVPQDKIQFIVSSFYGQVVALSTHPYGCRVIQRVLEHCDDQN 825
Query: 328 RERLV-AEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
++++ EI+ + LA+D YGNYV+QH++ P +++ +L G V S K+ SN
Sbjct: 826 TQQIIMEEIMQSVSTLAQDQYGNYVIQHIVEHGKPHERTTIISKLAGQIVKMSQQKFASN 885
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
V+E+CL E+ ++ E+L + + + ++ PFGNYV+Q L
Sbjct: 886 VIEKCLAFGSPEERQILVNEMLGTSDENEPLQAMMKDPFGNYVVQKVL 933
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 131/255 (51%), Gaps = 11/255 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G+++ L+ YGCR +Q+ + + ++ + E+ + + + D GN+V+QK +E
Sbjct: 725 LTGHVLPLSLQMYGCRVIQKALEVVDVDQQGQMVSELNGAIMKCVRDQNGNHVIQKCIEC 784
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
++ +I ++++ Q+V + + +G R + ++LE+ + +++ + TL
Sbjct: 785 VPQD---KIQFIVSSFYGQVVALSTHPYGCRVIQRVLEHCDDQNTQQIIMEEIMQSVSTL 841
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YVIQ+ V+H + +++++A ++ K V++ C+ + +R+
Sbjct: 842 AQDQYGNYVIQHIVEHGKPHERTTIISKLAGQIVKMSQQKFASNVIEKCLAFGSPEERQI 901
Query: 331 LVAEIIANA------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
LV E++ + + +D +GNYVVQ +L + +L +++ H + YG
Sbjct: 902 LVNEMLGTSDENEPLQAMMKDPFGNYVVQKVLETCDDRSLELILSRIKVHLNALKRYTYG 961
Query: 385 SNVVERC--LLESGE 397
++V R L+ +GE
Sbjct: 962 KHIVSRVEKLITTGE 976
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 3/198 (1%)
Query: 233 ICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDT 292
IC N G R LL+ N + L + V + D G IQ ++ S E+
Sbjct: 624 ICNNIEG-RFAPSLLDEFKNKKTRPFELPDIIDHVVQFSTDQYGSRFIQQKLETASVEEK 682
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
+ E+ + + TD G V+Q E+ +QR+ L ++ + L L+ YG V+
Sbjct: 683 TKIFPEIIPHARALMTDVFGNYVIQKFFEHGTESQRKELANQLTGHVLPLSLQMYGCRVI 742
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q L + ++ +L G + ++ G++V+++C +E + + I+
Sbjct: 743 QKALEVVDVDQQGQMVSELNGAIMKCVRDQNGNHVIQKC-IECVPQDKIQFIVSSFYG-Q 800
Query: 413 VSMLLMHPFGNYVIQSAL 430
V L HP+G VIQ L
Sbjct: 801 VVALSTHPYGCRVIQRVL 818
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ ++ EE +++ E++ E +M DPFGN
Sbjct: 867 ISKLAGQIVKMSQQKFASNVIEKCLAFGSPEERQILVNEMLGTSDENEPLQAMMKDPFGN 926
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLV 259
YVVQK++E C + IL + L R H + V KL+ T ++I L+
Sbjct: 927 YVVQKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLI--TTGERRIGLL 982
>gi|223947513|gb|ACN27840.1| unknown [Zea mays]
gi|413950240|gb|AFW82889.1| hypothetical protein ZEAMMB73_959107 [Zea mays]
Length = 873
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 180/362 (49%), Gaps = 24/362 (6%)
Query: 84 FSHPCQEAEPINQDSSILNLLHNHNF-DGLRSNGNELSSVPRNQWMSSLSLKRNQWLQDS 142
+ P + PI S + + N F G+R+ GN S W S + K + L S
Sbjct: 466 LASPVLPSSPIAPGSPLRHGERNMRFPSGMRNFGNSFGS-----WNSGMGGKMDANLMPS 520
Query: 143 F---------DCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE 193
L ++ G++V + DQYG R +Q+ + + EE +M+F E++ +
Sbjct: 521 LLEEFKSNKSKSYELSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALT 580
Query: 194 LMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNP 253
LM D FGNYVVQK E S Q + L +++ + L +G R + K +E +
Sbjct: 581 LMTDVFGNYVVQKFFEHGSTAQIKELAGQLIG---RVLALSLQMYGCRVIQKAIEVVDLE 637
Query: 254 QQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGC 313
Q +V A L + +D NG++VIQ C++ +++++ ++T GC
Sbjct: 638 LQTKMV-AELEGHVMRCVRDQNGNHVIQKCIECIPQHAIEFIISTFYGQVVMLSTHPYGC 696
Query: 314 CVLQHCVEYSKGAQRERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLE 372
V+Q +E+ + ++++ EI+ + LLA+D YGNYVVQH+L P ++++ +L
Sbjct: 697 RVIQRVLEHCDDPKTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLI 756
Query: 373 GHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVS----MLLMHPFGNYVIQS 428
G V S K+ SNV+E+CL+ + +I E+L S + S +++ FGNYV+Q
Sbjct: 757 GQIVQMSQQKFASNVIEKCLVFGNPVERQVLIGEMLGSTSESEPLEVMMKDQFGNYVVQK 816
Query: 429 AL 430
L
Sbjct: 817 VL 818
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ + E +++ E++ E +M D FGN
Sbjct: 752 IEKLIGQIVQMSQQKFASNVIEKCLVFGNPVERQVLIGEMLGSTSESEPLEVMMKDQFGN 811
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 812 YVVQKVLETCDDQQREMILTRIKTHLNTLKKYTYGKHIVARVEKLV 857
>gi|242054955|ref|XP_002456623.1| hypothetical protein SORBIDRAFT_03g039600 [Sorghum bicolor]
gi|241928598|gb|EES01743.1| hypothetical protein SORBIDRAFT_03g039600 [Sorghum bicolor]
Length = 1057
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 155/288 (53%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G++V + DQYG R +Q+ + + EE M+F E++ LM D FGNYVVQK
Sbjct: 720 LAEIAGHVVEFSADQYGSRFIQQKLETATVEEKNMVFEEIMPHALSLMTDVFGNYVVQKF 779
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQR + L ++ + L +G R + K +E + Q+ +V L
Sbjct: 780 FEHGSAEQRRELADKLLG---HVLALSLQMYGCRVIQKAIEVVDLDQKTKMV-TELDGHI 835
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ C++ + +++++ + ++T GC V+Q +E+ +
Sbjct: 836 MKCVRDQNGNHVIQKCIECVPEDSIQFIISTFYGHVVPLSTHPYGCRVIQRVLEHCADPK 895
Query: 328 RERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+++V EI+ + +LA+D YGNYVVQH+L P + ++ +L G + S K+ SN
Sbjct: 896 TQQIVMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSIIIEKLAGQIIQMSQQKFASN 955
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL G + +I E+L + + + ++ FGNYV+Q L
Sbjct: 956 VVEKCLTFGGATEREVLISEMLGTTDENEPLQAMMKDQFGNYVVQKVL 1003
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 119/240 (49%), Gaps = 13/240 (5%)
Query: 197 DPFG----NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTN 252
DP G N+ L E S + R+ L + +V + +G R + + LE T
Sbjct: 693 DPSGYMNENFPSSLLDEFKSNKARSFELAEIAG---HVVEFSADQYGSRFIQQKLETAT- 748
Query: 253 PQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSG 312
++ ++V + P A++L D G+YV+Q +H S E + L +++ + ++ G
Sbjct: 749 VEEKNMVFEEIMPHALSLMTDVFGNYVVQKFFEHGSAEQRRELADKLLGHVLALSLQMYG 808
Query: 313 CCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITAS-LLRQL 371
C V+Q +E Q+ ++V E+ + + D GN+V+Q + VP+ + ++
Sbjct: 809 CRVIQKAIEVVDLDQKTKMVTELDGHIMKCVRDQNGNHVIQKCIEC-VPEDSIQFIISTF 867
Query: 372 EGHYVSFSCNKYGSNVVERCLLESGEEQSTRIII-ELLRSPNVSMLLMHPFGNYVIQSAL 430
GH V S + YG V++R L + ++ +I++ E+L+S V ML +GNYV+Q L
Sbjct: 868 YGHVVPLSTHPYGCRVIQRVLEHCADPKTQQIVMDEILQS--VCMLAQDQYGNYVVQHVL 925
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G I+ +++ ++ +++ ++ E E++ E++ E +M D FGN
Sbjct: 937 IEKLAGQIIQMSQQKFASNVVEKCLTFGGATEREVLISEMLGTTDENEPLQAMMKDQFGN 996
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 997 YVVQKVLETCDDQQRELILSRVKVHLNALKKYTYGKHIVARVEKLV 1042
>gi|224098451|ref|XP_002311179.1| predicted protein [Populus trichocarpa]
gi|222850999|gb|EEE88546.1| predicted protein [Populus trichocarpa]
Length = 999
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 160/300 (53%), Gaps = 9/300 (3%)
Query: 136 NQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELM 195
+++ + C L ++ G++V + DQYG R +Q+ + + EE M+F E++ + LM
Sbjct: 648 DEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATAEENNMVFDEIMPQALSLM 707
Query: 196 IDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ 255
D FGNYV+QK E S Q + LT ++ + L +G R + K +E + QQ
Sbjct: 708 TDVFGNYVIQKFFEHGSASQIRELADQLTG---HVLTLSLQMYGCRVIQKAIEVVELDQQ 764
Query: 256 ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCV 315
+V L + +D NG++VIQ C++ + +++++ D ++T GC V
Sbjct: 765 TKMV-TELNGHILRCVRDQNGNHVIQKCIECVPEDAIQFIVSTFYDQVVTLSTHPYGCRV 823
Query: 316 LQHCVEYSKGAQRERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGH 374
+Q +E+ + +R++ EI+ + +LA+D YGNYVVQH+L P ++++++L G
Sbjct: 824 IQRVLEHCHDTKTQRIMMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQ 883
Query: 375 YVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
V S K+ SNV+E+CL + ++ E+L + + + ++ F NYV+Q L
Sbjct: 884 IVQMSQQKFASNVIEKCLTFGTPAERQALVDEMLGTTDENEPLQAMMKDQFANYVVQKVL 943
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
++ L G IV +++ ++ +++ ++ E + + E++ E +M D F N
Sbjct: 877 IKKLTGQIVQMSQQKFASNVIEKCLTFGTPAERQALVDEMLGTTDENEPLQAMMKDQFAN 936
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKL 246
YVVQK++E C ++Q + L+L+ L + T+G VL++
Sbjct: 937 YVVQKVLETCDDQQ---LGLILSRIKVHLNALKKYTYGKHIVLRV 978
>gi|226505762|ref|NP_001146200.1| uncharacterized protein LOC100279770 [Zea mays]
gi|219886161|gb|ACL53455.1| unknown [Zea mays]
Length = 873
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 180/362 (49%), Gaps = 24/362 (6%)
Query: 84 FSHPCQEAEPINQDSSILNLLHNHNF-DGLRSNGNELSSVPRNQWMSSLSLKRNQWLQDS 142
+ P + PI S + + N F G+R+ GN S W S + K + L S
Sbjct: 466 LASPVLPSSPIAPGSPLRHGERNMRFPSGMRNFGNSFGS-----WNSGMGGKMDANLMPS 520
Query: 143 F---------DCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE 193
L ++ G++V + DQYG R +Q+ + + EE +M+F E++ +
Sbjct: 521 LLEEFKSNKSKSYELSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALT 580
Query: 194 LMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNP 253
LM D FGNYVVQK E S Q + L +++ + L +G R + K +E +
Sbjct: 581 LMTDVFGNYVVQKFFEHGSTAQIKELAGQLIG---RVLALSLQMYGCRVIQKAIEVVDLE 637
Query: 254 QQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGC 313
Q +V A L + +D NG++VIQ C++ +++++ ++T GC
Sbjct: 638 LQTKMV-AELEGHVMRCVRDQNGNHVIQKCIECIPQHAIEFIISTFYGQVVMLSTHPYGC 696
Query: 314 CVLQHCVEYSKGAQRERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLE 372
V+Q +E+ + ++++ EI+ + LLA+D YGNYVVQH+L P ++++ +L
Sbjct: 697 RVIQRVLEHCDDPKTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLI 756
Query: 373 GHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVS----MLLMHPFGNYVIQS 428
G V S K+ SNV+E+CL+ + +I E+L S + S +++ FGNYV+Q
Sbjct: 757 GQIVQMSQQKFASNVIEKCLVFGNPVERQVLIGEMLGSTSESEPLEVMMKDQFGNYVVQK 816
Query: 429 AL 430
L
Sbjct: 817 VL 818
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ + E +++ E++ E +M D FGN
Sbjct: 752 IEKLIGQIVQMSQQKFASNVIEKCLVFGNPVERQVLIGEMLGSTSESEPLEVMMKDQFGN 811
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 812 YVVQKVLETCDDQQREMILTRIKTHLNTLKKYTYGKHIVARVEKLV 857
>gi|8071634|gb|AAF71823.1|AF153276_1 pumilio domain-containing protein PPD1 [Populus tremula x Populus
tremuloides]
Length = 966
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 157/291 (53%), Gaps = 9/291 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G IV + DQ+G R +Q+ + + EE E +F EV+ +LM D FGNYV+QK
Sbjct: 662 LSDVAGRIVEFSVDQHGSRFIQQKLENCNVEEKESVFKEVLPHAPKLMTDVFGNYVIQKF 721
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQR + L+ Q++++ L +G R + K LE + Q+ L L
Sbjct: 722 FEHGSPEQRIELAEKLSG---QILQLSLQMYGCRVIQKALEVIELDQKAKLA-QELDGHV 777
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGA 326
+ D NG++VIQ C++ E +++++ ++T GC V+Q +E+ S
Sbjct: 778 MRCVHDQNGNHVIQKCIECVPAEHIEFIISAFRGQVVTLSTHPYGCRVIQRVLEHCSDEL 837
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q + +V EI+ ++ LLA+D YGNYV QH+L P + ++ +L G V S +KY SN
Sbjct: 838 QSQCIVDEILESSYLLAQDQYGNYVTQHVLERGKPHERSQIISKLTGKIVQMSQHKYASN 897
Query: 387 VVERCLLESGEEQSTRIIIELL----RSPNVSMLLMHPFGNYVIQSALLVS 433
VVE+CL + + +I E++ + N+ +++ F NYV+Q L S
Sbjct: 898 VVEKCLKHADATERELMIGEIIGQSEDNDNLLIMMKDQFANYVVQKILETS 948
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
++L G+++ DQ G +Q+ + +P E IE I +V L P+G V+Q+++
Sbjct: 771 QELDGHVMRCVHDQNGNHVIQKCIECVPAEHIEFIISAFRGQVVTLSTHPYGCRVIQRVL 830
Query: 209 ELCSEEQRTR-ILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E CS+E +++ I+ + + L + + +G +LE P + S +++ L
Sbjct: 831 EHCSDELQSQCIVDEILESSYLLAQ---DQYGNYVTQHVLER-GKPHERSQIISKLTGKI 886
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVA------DNCYGIATDKSGCCVLQHCVE 321
V +++ V++ C+KH + + ++ E+ DN + D+ V+Q +E
Sbjct: 887 VQMSQHKYASNVVEKCLKHADATERELMIGEIIGQSEDNDNLLIMMKDQFANYVVQKILE 946
Query: 322 YSKGAQRERLVAEIIANALL 341
S Q+E L++ I A+ +L
Sbjct: 947 TSNDKQKEILLSRINAHLML 966
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 5/161 (3%)
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
AV D HY ++ S+ K+ L++VA + D+ G +Q +E
Sbjct: 636 AVNSADDPKRHYFLEELK---SNNARKFELSDVAGRIVEFSVDQHGSRFIQQKLENCNVE 692
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
++E + E++ +A L D +GNYV+Q P+ L +L G + S YG
Sbjct: 693 EKESVFKEVLPHAPKLMTDVFGNYVIQKFFEHGSPEQRIELAEKLSGQILQLSLQMYGCR 752
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQ 427
V+++ L +Q ++ EL +V + GN+VIQ
Sbjct: 753 VIQKALEVIELDQKAKLAQEL--DGHVMRCVHDQNGNHVIQ 791
>gi|225463345|ref|XP_002268751.1| PREDICTED: pumilio homolog 5 [Vitis vinifera]
gi|296089553|emb|CBI39372.3| unnamed protein product [Vitis vinifera]
Length = 1017
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 159/289 (55%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G+IV + DQ+G R +Q+ + + EE +F EV+ +LM D FGNYV+QK
Sbjct: 688 LSDIAGHIVEFSADQHGSRFIQQKLENCSVEEKASVFKEVLPHASKLMTDVFGNYVIQKF 747
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQR + L Q++ + L +G R + K L+ + +Q +L++ L
Sbjct: 748 FEHGNPEQRKELASQLAG---QILPLSLQMYGCRVIQKALD-VIELEQKTLLVRELDGHV 803
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGA 326
+ +D NG++VIQ C++ E ++++ + ++T GC V+Q +E+ +
Sbjct: 804 MRCVRDQNGNHVIQKCIESVPTEKIGFIISAFRSHVATLSTHPYGCRVIQRVLEHCTDEL 863
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q + +V EI+ + LA+D YGNYV QH+L P + ++ +L+GH V S +K+ SN
Sbjct: 864 QSQFIVDEILESICSLAQDQYGNYVTQHVLERGKPHERSQIINKLKGHIVQLSQHKFASN 923
Query: 387 VVERCLLESGEEQSTRIIIELL-----RSPNVSMLLMHPFGNYVIQSAL 430
VVE+C LE G+ ++IE + + N+ +++ F NYVIQ L
Sbjct: 924 VVEKC-LEYGDVNERGLLIEEIIGHNEGNDNLLIMMKDQFANYVIQKIL 971
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 123/254 (48%), Gaps = 9/254 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G I+ L+ YGCR +Q+ + + E+ ++ E+ V + D GN+V+QK +E
Sbjct: 763 LAGQILPLSLQMYGCRVIQKALDVIELEQKTLLVRELDGHVMRCVRDQNGNHVIQKCIES 822
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E +I +++ + + + +G R + ++LE+ T+ Q ++ + +L
Sbjct: 823 VPTE---KIGFIISAFRSHVATLSTHPYGCRVIQRVLEHCTDELQSQFIVDEILESICSL 879
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YV Q+ ++ + ++N++ + ++ K V++ C+EY +R
Sbjct: 880 AQDQYGNYVTQHVLERGKPHERSQIINKLKGHIVQLSQHKFASNVVEKCLEYGDVNERGL 939
Query: 331 LVAEIIA------NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ EII N L++ +D + NYV+Q +L + SL ++ H + YG
Sbjct: 940 LIEEIIGHNEGNDNLLIMMKDQFANYVIQKILDICTDNQRESLFVRIRVHAHALKKYTYG 999
Query: 385 SNVVERCLLESGEE 398
++V R GEE
Sbjct: 1000 KHIVSRFEQLFGEE 1013
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 15/228 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+R+L G+++ +DQ G +Q+ + S+P E+I I V L P+G V+Q++
Sbjct: 796 VRELDGHVMRCVRDQNGNHVIQKCIESVPTEKIGFIISAFRSHVATLSTHPYGCRVIQRV 855
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRIC---LNTHGIRAVLKLLENLTNPQQISLVLAALR 264
+E C++E +++ ++ D L IC + +G +LE P + S ++ L+
Sbjct: 856 LEHCTDELQSQFIV-----DEILESICSLAQDQYGNYVTQHVLER-GKPHERSQIINKLK 909
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLL------NEVADNCYGIATDKSGCCVLQH 318
V L++ V++ C+++ + L+ NE DN + D+ V+Q
Sbjct: 910 GHIVQLSQHKFASNVVEKCLEYGDVNERGLLIEEIIGHNEGNDNLLIMMKDQFANYVIQK 969
Query: 319 CVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITAS 366
++ QRE L I +A L + YG ++V L +I AS
Sbjct: 970 ILDICTDNQRESLFVRIRVHAHALKKYTYGKHIVSRFEQLFGEEIEAS 1017
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LE L + + L+ + V + D +G IQ +++ S E+ + EV +
Sbjct: 674 FLEELKSGKGRRFELSDIAGHIVEFSADQHGSRFIQQKLENCSVEEKASVFKEVLPHASK 733
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ QR+ L +++ L L+ YG V+Q L + +
Sbjct: 734 LMTDVFGNYVIQKFFEHGNPEQRKELASQLAGQILPLSLQMYGCRVIQKALDVIELEQKT 793
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
L+R+L+GH + ++ G++V+++C +ES + II RS +V+ L HP+G V
Sbjct: 794 LLVRELDGHVMRCVRDQNGNHVIQKC-IESVPTEKIGFIISAFRS-HVATLSTHPYGCRV 851
Query: 426 IQSAL 430
IQ L
Sbjct: 852 IQRVL 856
>gi|332017050|gb|EGI57849.1| Maternal protein pumilio [Acromyrmex echinatior]
Length = 630
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 183/354 (51%), Gaps = 14/354 (3%)
Query: 91 AEPINQDSSILNLLHNHNFDGLRSNGNELSSVPRNQWMSSLSLK----RNQWLQD----S 142
AE + S++ L N F S L S P ++++ K R++ L+D
Sbjct: 196 AEAKFRASAVPTLTANGVFGSSSSLFPNLVSKPGRGGAANINDKNSGGRSRLLEDFRNNR 255
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F LRDL +IV ++DQ+G R +Q+ + E +++F E++ LM D FGNY
Sbjct: 256 FPSLQLRDLANHIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILSSAYSLMTDVFGNY 315
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
V+QK E ++EQ++ + + ++ + L +G R + K LE++ P+Q ++
Sbjct: 316 VIQKFFEYGTQEQKSTLAQKVRG---HVLPLALQMYGCRVIQKALESI-GPEQQQEIVRE 371
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L + KD NG++V+Q C++ ++++ A Y ++T GC V+Q +E+
Sbjct: 372 LDGHVLKCVKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEH 431
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
Q + ++ E+ A L +D YGNYV+QH+L P+ A L+ + G ++ S +K
Sbjct: 432 CTAEQTQGILQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLALSQHK 491
Query: 383 YGSNVVERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
+ SNVVE+C+ + ++ +I E+ +++++ + NYV+Q + V++
Sbjct: 492 FASNVVEKCVTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAE 545
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 126/244 (51%), Gaps = 8/244 (3%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ +RG+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +
Sbjct: 334 QKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVRELDGHVLKCVKDQNGNHVVQKCI 393
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
E C E + + ++ Q+ + + +G R + ++LE+ T +Q +L L
Sbjct: 394 E-CVEPRALQFVIGAFAG--QVYSLSTHPYGCRVIQRILEHCT-AEQTQGILQELHAATD 449
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED L++ V ++ K V++ CV ++ +R
Sbjct: 450 QLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLALSQHKFASNVVEKCVTHATRQER 509
Query: 329 ERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H S YG
Sbjct: 510 AVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKVLMHKIRPHLGSLRKYTYG 569
Query: 385 SNVV 388
+++
Sbjct: 570 KHII 573
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 68/165 (41%), Gaps = 3/165 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L++L L +DQYG +Q + E+ + V +V L F + VV+K
Sbjct: 441 LQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLALSQHKFASNVVEKC 500
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + ++R ++ + + + + + V++ + ++ P Q +++ +RP
Sbjct: 501 VTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKVLMHKIRPHL 560
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSG 312
+L K T G ++I K F + V G +T G
Sbjct: 561 GSLRKYTYGKHIIVKLEKFFMKTASAM---GVGATSAGTSTSSGG 602
>gi|356574619|ref|XP_003555443.1| PREDICTED: pumilio homolog 4-like [Glycine max]
Length = 1000
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 153/288 (53%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ ++V + DQYG R +Q+ + + EE IF E+I LM D FGNYV+QK
Sbjct: 649 LPDIIDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEIIPHARALMTDVFGNYVIQKF 708
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ QR + LT ++ + L +G R + K LE + QQ LV + L
Sbjct: 709 FEHGTDSQRKELASQLTG---HVLPLSLQMYGCRVIQKALEVVDADQQGQLV-SELNGAI 764
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ C++ + +++++ ++T GC V+Q +E+
Sbjct: 765 MKCVRDQNGNHVIQKCIECVPQDKIQFIVSSFYGQVVLLSTHPYGCRVIQRVLEHCDDLN 824
Query: 328 RERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
++++ EI+ + LA+D YGNYV+QH++ P +++ +L G V S K+ SN
Sbjct: 825 TQQIIMDEIMQSVGTLAQDQYGNYVIQHIVEHGKPHERTAIISKLAGQIVKMSQQKFASN 884
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
V+E+CL E+ ++ E+L + + + ++ PFGNYV+Q L
Sbjct: 885 VIEKCLAFGSPEERQILVNEMLGTSDENEPLQAMMKDPFGNYVVQKVL 932
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 139/271 (51%), Gaps = 11/271 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G+++ L+ YGCR +Q+ + + ++ + E+ + + + D GN+V+QK +E
Sbjct: 724 LTGHVLPLSLQMYGCRVIQKALEVVDADQQGQLVSELNGAIMKCVRDQNGNHVIQKCIEC 783
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
++ +I ++++ Q+V + + +G R + ++LE+ + +++ + TL
Sbjct: 784 VPQD---KIQFIVSSFYGQVVLLSTHPYGCRVIQRVLEHCDDLNTQQIIMDEIMQSVGTL 840
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YVIQ+ V+H + +++++A ++ K V++ C+ + +R+
Sbjct: 841 AQDQYGNYVIQHIVEHGKPHERTAIISKLAGQIVKMSQQKFASNVIEKCLAFGSPEERQI 900
Query: 331 LVAEIIANA------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
LV E++ + + +D +GNYVVQ +L + +L +++ H + YG
Sbjct: 901 LVNEMLGTSDENEPLQAMMKDPFGNYVVQKVLETCDDRSLELILSRIKVHLNALKRYTYG 960
Query: 385 SNVVERC--LLESGEEQSTRIIIELLRSPNV 413
++V R L+ +GE++ +++E P V
Sbjct: 961 KHIVSRVEKLITTGEKRIGLLVLETRSPPTV 991
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 2/190 (1%)
Query: 241 RAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVA 300
R LL+ N + L + V + D G IQ ++ S E+ + E+
Sbjct: 630 RFASSLLDEFKNKKTRPFELPDIIDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEII 689
Query: 301 DNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRV 360
+ + TD G V+Q E+ +QR+ L +++ + L L+ YG V+Q L +
Sbjct: 690 PHARALMTDVFGNYVIQKFFEHGTDSQRKELASQLTGHVLPLSLQMYGCRVIQKALEVVD 749
Query: 361 PQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHP 420
L+ +L G + ++ G++V+++C +E + + I+ V +L HP
Sbjct: 750 ADQQGQLVSELNGAIMKCVRDQNGNHVIQKC-IECVPQDKIQFIVSSFYG-QVVLLSTHP 807
Query: 421 FGNYVIQSAL 430
+G VIQ L
Sbjct: 808 YGCRVIQRVL 817
>gi|403357293|gb|EJY78273.1| Pumilio [Oxytricha trifallax]
Length = 1120
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 164/301 (54%), Gaps = 18/301 (5%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
+L DL+ ++ + DQ R +Q+ + EE +++F E+++ +LM D FGNYV+QK
Sbjct: 654 TLLDLQAHLAECSLDQQCSRFIQQRLEDAKDEEKQLLFNELMNDSQKLMKDVFGNYVIQK 713
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
++E ++ QRT + + + ++ + + +G R V K LE +T QQ L+ +RP
Sbjct: 714 MLEYGNQNQRTMLYQQIKGN---MIPLSQDQYGCRVVQKALEVVTTQQQDDLI-GEIRPQ 769
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+D NG++VIQ ++ S E +++++ Y ++ + GC V+Q +E+ K
Sbjct: 770 VQLCVEDPNGNHVIQKIIEQVSSEKVQFIVDAFKGRVYEMSVHQYGCRVIQRMLEHCKED 829
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q + ++ E+ L L +D YGNYV+ H+L + ++ +++ V S +K+GSN
Sbjct: 830 QIKPILVEVFERVLDLTKDLYGNYVISHVLEHGAQKYKTFVINKMKKRVVQLSIHKFGSN 889
Query: 387 VVERCLLESGEEQSTRIIIELLR------------SPNVSML--LMHPFGNYVIQSALLV 432
V+E+CL S ++Q II E+++ S N +++ + +GN+VIQ L +
Sbjct: 890 VIEKCLQHSDQKQKDDIIEEIIQVRLMDDETYQSNSQNFTLMDVMKDKYGNFVIQRVLDI 949
Query: 433 S 433
S
Sbjct: 950 S 950
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 113/248 (45%), Gaps = 56/248 (22%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ ++GN++ L++DQYGCR +Q+ + + ++ + + E+ +V + DP GN+V+QK++
Sbjct: 728 QQIKGNMIPLSQDQYGCRVVQKALEVVTTQQQDDLIGEIRPQVQLCVEDPNGNHVIQKII 787
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
E S E ++ ++ ++ + ++ +G R + ++LE+ QI +L + +
Sbjct: 788 EQVSSE---KVQFIVDAFKGRVYEMSVHQYGCRVIQRMLEHCK-EDQIKPILVEVFERVL 843
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVA---------------------------- 300
LTKD G+YVI + ++H + + +++N++
Sbjct: 844 DLTKDLYGNYVISHVLEHGAQKYKTFVINKMKKRVVQLSIHKFGSNVIEKCLQHSDQKQK 903
Query: 301 --------------DNCY----------GIATDKSGCCVLQHCVEYSKGAQRERLVAEII 336
D Y + DK G V+Q ++ S QR+ L+ +I+
Sbjct: 904 DDIIEEIIQVRLMDDETYQSNSQNFTLMDVMKDKYGNFVIQRVLDISNENQRKALIDKIL 963
Query: 337 ANALLLAE 344
AL + +
Sbjct: 964 KVALHMKK 971
>gi|219110179|ref|XP_002176841.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411376|gb|EEC51304.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 304
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 156/292 (53%), Gaps = 14/292 (4%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G I L++DQ GCR +Q+ + +I E + E M+DPFGNY+ QK++E +
Sbjct: 1 GQIRRLSRDQVGCRLVQQALDEEGTIAATLILKEGLPFWGEAMVDPFGNYLFQKILEKVT 60
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLA----------- 261
++R ++++ + +LV LN HG R+V KL+E + +V A
Sbjct: 61 PQER---IMLVKSVSPRLVNASLNLHGTRSVQKLVELCAQDEHNQVVGANEESAADILTY 117
Query: 262 ALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVE 321
+L P A L D++G++VIQ + +++ +K++ + VA + +A + GCCV+Q C++
Sbjct: 118 SLAPAAARLCIDSHGNHVIQRILLKLNYKHSKFVFDAVALSVGDVARHRHGCCVIQRCLD 177
Query: 322 YSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
R LV I+ +L L +D YGNYVVQ++L + Q ++ + G +
Sbjct: 178 SQPTEARSHLVLRIVDKSLELMQDAYGNYVVQYVLDVCSDQDVQAVCESVAGRVNLLAIQ 237
Query: 382 KYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVS 433
K+ SNV+E+CL + + E+ R + L+M PFGNYV+Q AL V+
Sbjct: 238 KFSSNVMEKCLERCSDRIKEMYLDEMSRPERIRELMMDPFGNYVVQRALSVA 289
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI--DRVCELMIDPFGNYVVQKLVEL 210
G + LA ++ +++ + EM E+ +R+ ELM+DPFGNYVVQ+ + +
Sbjct: 229 GRVNLLAIQKFSSNVMEKCLERCSDRIKEMYLDEMSRPERIRELMMDPFGNYVVQRALSV 288
Query: 211 CSEEQRTRIL 220
+ Q R++
Sbjct: 289 ATHTQAIRLV 298
>gi|356538984|ref|XP_003537980.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1047
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 154/291 (52%), Gaps = 9/291 (3%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
C L ++ G++V + DQYG R +Q+ + + EE M++ E++ LM D FGNYVV
Sbjct: 706 CFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHSLALMTDVFGNYVV 765
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK E QR + L ++ + L +G R + K +E + Q+I +V L
Sbjct: 766 QKFFEHGLASQRRELANKLLG---HVLTLSLQMYGCRVIQKAIEVVDLDQKIEMV-QELD 821
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+ +D NG++VIQ C++ + ++++ D ++T GC V+Q +E+ K
Sbjct: 822 GNVMRCVRDQNGNHVIQKCIECVPEDAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCK 881
Query: 325 G-AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+++++ EI+ +LA+D YGNYVVQH+L P + ++++L G V S K+
Sbjct: 882 DPTTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSCIIKELAGKIVQMSQQKF 941
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
SNVVE+CL G + ++ E+L + + + ++ F NYV+Q L
Sbjct: 942 ASNVVEKCLTFGGPSERQLLVSEMLGTTDENEPLQAMMKDQFANYVVQKVL 992
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE + L+ + V + D G IQ ++ + E+ + E+ +
Sbjct: 695 LLEEFKTNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHSLA 754
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ +QR L +++ + L L+ YG V+Q + +
Sbjct: 755 LMTDVFGNYVVQKFFEHGLASQRRELANKLLGHVLTLSLQMYGCRVIQKAIEVVDLDQKI 814
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++++L+G+ + ++ G++V+++C +E E + I+ V L HP+G V
Sbjct: 815 EMVQELDGNVMRCVRDQNGNHVIQKC-IECVPEDAIHFIVSTFFD-QVVTLSTHPYGCRV 872
Query: 426 IQSAL 430
IQ L
Sbjct: 873 IQRVL 877
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L G IV +++ ++ +++ ++ E +++ E++ E +M D F N
Sbjct: 926 IKELAGKIVQMSQQKFASNVVEKCLTFGGPSERQLLVSEMLGTTDENEPLQAMMKDQFAN 985
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 986 YVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIVTRVEKLV 1031
>gi|357167245|ref|XP_003581070.1| PREDICTED: pumilio homolog 2-like [Brachypodium distachyon]
Length = 764
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 153/285 (53%), Gaps = 6/285 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D GN++ ++ DQYG R +Q+ + + E IF E++ L D FGNYV+QK
Sbjct: 415 LLDALGNVMKVSVDQYGSRFIQQKLEEASAADREKIFPEILSNAIPLTTDVFGNYVIQKF 474
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E +E Q ++ L F+L + +G R V K++E + ++I +V L+
Sbjct: 475 FEFATESQLNQLADKLNGRIFEL---SFHMYGCRVVQKVIEVVDMDRKIDIV-QELKNYV 530
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG-A 326
+ D NG++VIQ C++ E +++ + + + T + GC V+Q +E+ A
Sbjct: 531 LKCIGDQNGNHVIQKCIECVPEERIPFVIEAILSQIFMLCTHQYGCRVIQRVLEHCHDPA 590
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ ++ EI+ +A L ED +GNYVVQH+L P+ +S++++L G + S KY SN
Sbjct: 591 TQSAVMNEIVQHACGLTEDKFGNYVVQHVLQHGKPEERSSIIQKLSGQVLFLSQQKYASN 650
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMHP-FGNYVIQSAL 430
V+E+CL+ E+ +I E++ S LM FGNYV+Q L
Sbjct: 651 VIEKCLVYGTPEERDGLIREIVSSGQTFQALMKDQFGNYVVQKVL 695
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 128/252 (50%), Gaps = 8/252 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G I L+ YGCR +Q+ + + + I E+ + V + + D GN+V+QK +E
Sbjct: 490 LNGRIFELSFHMYGCRVVQKVIEVVDMDRKIDIVQELKNYVLKCIGDQNGNHVIQKCIEC 549
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
EE RI ++ Q+ +C + +G R + ++LE+ +P S V+ + A L
Sbjct: 550 VPEE---RIPFVIEAILSQIFMLCTHQYGCRVIQRVLEHCHDPATQSAVMNEIVQHACGL 606
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
T+D G+YV+Q+ ++H E+ ++ +++ ++ K V++ C+ Y +R+
Sbjct: 607 TEDKFGNYVVQHVLQHGKPEERSSIIQKLSGQVLFLSQQKYASNVIEKCLVYGTPEERDG 666
Query: 331 LVAEIIANALL---LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
L+ EI+++ L +D +GNYVVQ +L + +L ++ H YG ++
Sbjct: 667 LIREIVSSGQTFQALMKDQFGNYVVQKVLQTCDDRHLEMILSSIKLHLNELKTYTYGKHI 726
Query: 388 VERC--LLESGE 397
V R L+ +GE
Sbjct: 727 VSRIEKLIITGE 738
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR---VCELMIDPFGNY 202
S ++ L G ++ L++ +Y +++ + EE + + E++ LM D FGNY
Sbjct: 630 SIIQKLSGQVLFLSQQKYASNVIEKCLVYGTPEERDGLIREIVSSGQTFQALMKDQFGNY 689
Query: 203 VVQKLVELCSEEQRTRIL 220
VVQK+++ C + IL
Sbjct: 690 VVQKVLQTCDDRHLEMIL 707
>gi|340373711|ref|XP_003385383.1| PREDICTED: pumilio homolog 2-like [Amphimedon queenslandica]
Length = 459
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 164/307 (53%), Gaps = 10/307 (3%)
Query: 134 KRNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVID 189
KR Q L+D L D++G++V AKDQ+G R +Q+ + E+ +M+F E++
Sbjct: 107 KRCQLLEDFRNGRVTTIDLADVQGHVVDFAKDQHGSRFIQQKLEQCSDEDKDMVFSEILP 166
Query: 190 RVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLEN 249
L+ D FGNYV+QK E + +Q+ ++ L + + L+T+G R + K +E+
Sbjct: 167 ASYSLITDVFGNYVIQKFFEFGTIDQKATLVDRLHG---HVPSLSLHTYGCRVIQKAIES 223
Query: 250 LTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATD 309
+ P + ++ L + +D NG++VIQ C++ +++ Y +AT
Sbjct: 224 VP-PYLQAEIINELDGFVLKSIRDQNGNHVIQKCIECVDPPLLTFIIVSFKGQVYDMATH 282
Query: 310 KSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLR 369
GC V+Q +E+ Q + L+ EI +A L D YGNYVVQH+L P+ + ++
Sbjct: 283 PYGCRVIQRILEHCTAQQTDLLLKEIHLHADQLIADNYGNYVVQHVLEKGRPEQKSRIIG 342
Query: 370 QLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHP--FGNYVIQ 427
+ G VS S +K+ SNVVE+C++ + + +I EL +P ++L M F NYV+Q
Sbjct: 343 VIRGRVVSLSQHKFASNVVEKCIVHASRHERAGLIDELCSAPEGAILTMTKDQFANYVVQ 402
Query: 428 SALLVSK 434
L +++
Sbjct: 403 KMLDIAE 409
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 116/244 (47%), Gaps = 8/244 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G++ +L+ YGCR +Q+ + S+P I E+ V + + D GN+V+QK +E
Sbjct: 200 LHGHVPSLSLHTYGCRVIQKAIESVPPYLQAEIINELDGFVLKSIRDQNGNHVIQKCIEC 259
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
T I++ Q+ + + +G R + ++LE+ T QQ L+L + A L
Sbjct: 260 VDPPLLTFIIVSFKG---QVYDMATHPYGCRVIQRILEHCT-AQQTDLLLKEIHLHADQL 315
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
D G+YV+Q+ ++ E ++ + ++ K V++ C+ ++ +R
Sbjct: 316 IADNYGNYVVQHVLEKGRPEQKSRIIGVIRGRVVSLSQHKFASNVVEKCIVHASRHERAG 375
Query: 331 LVAEIIANA----LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
L+ E+ + L + +D + NYVVQ +L + P L+ +L H + Y +
Sbjct: 376 LIDELCSAPEGAILTMTKDQFANYVVQKMLDIAEPSQRKMLIYRLRPHLPTLRKFTYAKH 435
Query: 387 VVER 390
+V +
Sbjct: 436 IVNK 439
>gi|150951083|ref|XP_001387330.2| Translational repressor Pumilio/PUF3 and related RNA-binding
proteins (Puf superfamily) [Scheffersomyces stipitis CBS
6054]
gi|149388306|gb|EAZ63307.2| Translational repressor Pumilio/PUF3 and related RNA-binding
proteins (Puf superfamily) [Scheffersomyces stipitis CBS
6054]
Length = 835
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 157/293 (53%), Gaps = 18/293 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+ V KDQ+G R +Q+ + EE E+IF E+ D +LM D FGNYV+QK
Sbjct: 491 LKDIYGHAVEFTKDQHGSRFIQQKLPDASDEEKEVIFNEIRDISYDLMTDVFGNYVIQKY 550
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S Q+ +L + ++L L +G R V + LE + QI ++ LR
Sbjct: 551 FEHGSTTQKKVLLDYMIGHIYEL---SLQMYGCRVVQRALEAIDLDGQIKII-EELRDYI 606
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ ++ + +++L+ + + Y ++T GC V+Q +EYS
Sbjct: 607 LICAKDQNGNHVIQKSIERIPFDRIRFILDSLDNQIYHLSTHPYGCRVIQRLLEYSNVED 666
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ ++ E+ L +D YGNYV+QH+L P ++L+ + G V+FS +K+ SNV
Sbjct: 667 QQVILQELNRFIFYLIQDQYGNYVMQHILERGEPDDREAILKVVLGSVVNFSKHKFASNV 726
Query: 388 VERCLLESGEEQSTRIIIELL-------------RSPNVSMLLMHPFGNYVIQ 427
+E+C+ Q RI+ E++ SP +++++ + NYVIQ
Sbjct: 727 IEKCIKYGTLSQRKRILREVMLGNEDFNVELVSDESP-LALMMKDQYANYVIQ 778
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 108/218 (49%), Gaps = 18/218 (8%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G+I L+ YGCR +QR + ++ + I E+ D + D GN+V+QK +E
Sbjct: 568 GHIYELSLQMYGCRVVQRALEAIDLDGQIKIIEELRDYILICAKDQNGNHVIQKSIERIP 627
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
+ RI +L + D Q+ + + +G R + +LLE +N + ++L L L +
Sbjct: 628 FD---RIRFILDSLDNQIYHLSTHPYGCRVIQRLLE-YSNVEDQQVILQELNRFIFYLIQ 683
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D G+YV+Q+ ++ +D + +L V + + K V++ C++Y +QR+R++
Sbjct: 684 DQYGNYVMQHILERGEPDDREAILKVVLGSVVNFSKHKFASNVIEKCIKYGTLSQRKRIL 743
Query: 333 AEII--------------ANALLLAEDCYGNYVVQHLL 356
E++ + L+ +D Y NYV+Q L+
Sbjct: 744 REVMLGNEDFNVELVSDESPLALMMKDQYANYVIQKLV 781
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 2/138 (1%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
+Y L ++ + D+ G +Q + + ++E + EI + L D +GNYV+
Sbjct: 488 EYYLKDIYGHAVEFTKDQHGSRFIQQKLPDASDEEKEVIFNEIRDISYDLMTDVFGNYVI 547
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q LL + GH S YG VV+R LE+ + IIE LR
Sbjct: 548 QKYFEHGSTTQKKVLLDYMIGHIYELSLQMYGCRVVQRA-LEAIDLDGQIKIIEELRD-Y 605
Query: 413 VSMLLMHPFGNYVIQSAL 430
+ + GN+VIQ ++
Sbjct: 606 ILICAKDQNGNHVIQKSI 623
>gi|402225601|gb|EJU05662.1| ARM repeat-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 356
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 160/292 (54%), Gaps = 13/292 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI-DRVCELMIDPFGNYVVQK 206
LR+L G++ + DQ+G R +Q + + EE +M+F E++ + L+ D FGNYV+QK
Sbjct: 35 LRNLFGHVNEFSADQHGSRFIQIKLDTATPEEKQMVFDEILAGNIMPLVTDVFGNYVIQK 94
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L+E E +R I + + + + +G R V K +E +T P+Q S ++A L P
Sbjct: 95 LIEFGGETERNAIFEAMQG---HFLILSWHMYGCRVVQKAIEYIT-PEQQSQLIAELAPD 150
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q ++ S D + + Y ++T GC VLQ C+E+
Sbjct: 151 IMKCVKDANGNHVVQKLIERVS-PDRLTFVEAFKGSVYDLSTHTYGCRVLQRCLEHLTEE 209
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q L+ E+ + L +D +GNYVVQ +L P+ A ++ +L G + +C+K+ SN
Sbjct: 210 QTRPLLDELHEHTANLMQDQFGNYVVQFVLEHGQPEDRARVIAKLRGQMLMMACHKFASN 269
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSALLV 432
V E+ L+ + + +S R++I+ L +P V +++ F NYV+Q AL V
Sbjct: 270 VCEKALM-TADSESRRLLIDELMTPKPNGVSPVQLMMKDQFANYVLQRALSV 320
>gi|255544506|ref|XP_002513314.1| pumilio, putative [Ricinus communis]
gi|223547222|gb|EEF48717.1| pumilio, putative [Ricinus communis]
Length = 1004
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 155/292 (53%), Gaps = 11/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G+IV + DQ+G R +Q+ + EE +F EV+ +LM D FGNYV+QK
Sbjct: 673 LSDIAGHIVEFSVDQHGSRFIQQKLEHCSFEEKVSVFKEVLPHASKLMTDVFGNYVIQKF 732
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S +QR + L+ Q++++ L +G R + K LE + Q+ LV L
Sbjct: 733 FEHGSPDQRKELADKLSG---QMLQLSLQMYGCRVIQKALEVIELDQKTQLV-QELDGHV 788
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGA 326
+ D NG++VIQ C++ + +++++ +AT GC V+Q +E+ S
Sbjct: 789 LRCVHDQNGNHVIQKCIECVPTMNIEFIISAFQGQVAALATHPYGCRVIQRVLEHCSDDL 848
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q + +V EI+ +A LLA+D YGNYV QH+L P + ++ +L G V S +KY SN
Sbjct: 849 QSQCIVDEILESAYLLAQDQYGNYVTQHVLERGKPYERSQIISKLTGKIVQMSQHKYASN 908
Query: 387 VVERCLLESGEEQSTRIIIELL-----RSPNVSMLLMHPFGNYVIQSALLVS 433
V+E+C LE G ++IE + S ++ F NYV+Q L +S
Sbjct: 909 VIEKC-LEHGSPIEQELLIEEIIGQSEESDQFLTMMKDQFANYVVQKILEIS 959
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LE L + L+ + V + D +G IQ ++H S E+ + EV +
Sbjct: 659 FLEELKSSNARKFELSDIAGHIVEFSVDQHGSRFIQQKLEHCSFEEKVSVFKEVLPHASK 718
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ QR+ L ++ L L+ YG V+Q L +
Sbjct: 719 LMTDVFGNYVIQKFFEHGSPDQRKELADKLSGQMLQLSLQMYGCRVIQKALEVIELDQKT 778
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
L+++L+GH + ++ G++V+++C +E + II + V+ L HP+G V
Sbjct: 779 QLVQELDGHVLRCVHDQNGNHVIQKC-IECVPTMNIEFIISAFQG-QVAALATHPYGCRV 836
Query: 426 IQSAL 430
IQ L
Sbjct: 837 IQRVL 841
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI------DRVCELMIDPFGN 201
+ L G IV +++ +Y +++ + E E++ E+I D+ +M D F N
Sbjct: 890 ISKLTGKIVQMSQHKYASNVIEKCLEHGSPIEQELLIEEIIGQSEESDQFLTMMKDQFAN 949
Query: 202 YVVQKLVELCSEEQRTRIL 220
YVVQK++E+ +++QR +L
Sbjct: 950 YVVQKILEISNDKQREILL 968
>gi|356538982|ref|XP_003537979.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1049
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 154/291 (52%), Gaps = 9/291 (3%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
C L ++ G++V + DQYG R +Q+ + + EE +++ E++ LM D FGNYVV
Sbjct: 708 CFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNLVYQEIMPHALALMTDVFGNYVV 767
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK E QR + L ++ + L +G R + K +E + Q+I +V L
Sbjct: 768 QKFFEHGLASQRRELANKLHG---HVLTLSLQMYGCRVIQKAIEVVDLDQKIEMV-QELD 823
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+ +D NG++VIQ C++ + ++++ D ++T GC V+Q +E+ K
Sbjct: 824 GNVMRCVRDQNGNHVIQKCIECVPEDAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCK 883
Query: 325 G-AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+++++ EI+ +LA+D YGNYVVQH+L P +S++++L V S K+
Sbjct: 884 DPTTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSSIIKELADKIVQMSQQKF 943
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
SNVVE+CL G + ++ E+L S + + ++ F NYV+Q L
Sbjct: 944 ASNVVEKCLTFGGPSERQLLVSEMLGSTDENEPLQAMMKDQFANYVVQKVL 994
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 284 VKHFSHEDTK-YLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLL 342
++ F TK + L+E+A + + D+ G +Q +E + ++ + EI+ +AL L
Sbjct: 698 LEEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNLVYQEIMPHALAL 757
Query: 343 AEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTR 402
D +GNYVVQ + L +L GH ++ S YG V+++ + +Q
Sbjct: 758 MTDVFGNYVVQKFFEHGLASQRRELANKLHGHVLTLSLQMYGCRVIQKAIEVVDLDQKIE 817
Query: 403 IIIELLRSPNVSMLLMHPFGNYVIQ 427
++ EL NV + GN+VIQ
Sbjct: 818 MVQEL--DGNVMRCVRDQNGNHVIQ 840
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE + + L+ + V + D G IQ ++ + E+ + E+ +
Sbjct: 697 LLEEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNLVYQEIMPHALA 756
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ +QR L ++ + L L+ YG V+Q + +
Sbjct: 757 LMTDVFGNYVVQKFFEHGLASQRRELANKLHGHVLTLSLQMYGCRVIQKAIEVVDLDQKI 816
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++++L+G+ + ++ G++V+++C +E E + I+ V L HP+G V
Sbjct: 817 EMVQELDGNVMRCVRDQNGNHVIQKC-IECVPEDAIHFIVSTFFD-QVVTLSTHPYGCRV 874
Query: 426 IQSAL 430
IQ L
Sbjct: 875 IQRVL 879
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDP 198
S +++L IV +++ ++ +++ ++ E +++ E++ E +M D
Sbjct: 925 SSIIKELADKIVQMSQQKFASNVVEKCLTFGGPSERQLLVSEMLGSTDENEPLQAMMKDQ 984
Query: 199 FGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
F NYVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 985 FANYVVQKVLETCDDQQRELILYRIKVHLNALKKYTYGKHIVARVEKLV 1033
>gi|357454231|ref|XP_003597396.1| Pumilio-like protein [Medicago truncatula]
gi|87241276|gb|ABD33134.1| Nucleic acid binding NABP [Medicago truncatula]
gi|355486444|gb|AES67647.1| Pumilio-like protein [Medicago truncatula]
Length = 1047
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 155/291 (53%), Gaps = 9/291 (3%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
C L ++ G++V + DQYG R +Q+ + + EE M++ E+ LM D FGNYVV
Sbjct: 707 CFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHALALMTDVFGNYVV 766
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK E QR + L ++ + L +G R + K +E + Q+I +V L
Sbjct: 767 QKFFEHGLASQRRELANKLYG---HVLTLSLQMYGCRVIQKAIEVVDLDQKIKMV-QELD 822
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+ +D NG++VIQ C++ + ++++ D ++T GC V+Q +E+ +
Sbjct: 823 GNIMRCVRDQNGNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPYGCRVIQRVLEHCE 882
Query: 325 GAQ-RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+++++ EI+ +LA+D YGNYVVQH+L P ++++++L G+ V S K+
Sbjct: 883 NPDTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGNIVQMSQQKF 942
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
SNVVE+CL G + ++ E+L + + + ++ F NYV+Q L
Sbjct: 943 ASNVVEKCLTFGGPSERLLLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL 993
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L GNIV +++ ++ +++ ++ E ++ E++ E +M D F N
Sbjct: 927 IKELAGNIVQMSQQKFASNVVEKCLTFGGPSERLLLVNEMLGTTDENEPLQAMMKDQFAN 986
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 987 YVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIVARVEKLV 1032
>gi|50552866|ref|XP_503843.1| YALI0E12001p [Yarrowia lipolytica]
gi|49649712|emb|CAG79436.1| YALI0E12001p [Yarrowia lipolytica CLIB122]
Length = 752
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 164/307 (53%), Gaps = 13/307 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+DL+G+IV + DQ+G R +Q+ + S EE IF E+ +LM D FGNYVVQK
Sbjct: 425 LKDLQGHIVEFSGDQHGSRFIQQQLESASGEEKSAIFEEIRPSSLQLMTDVFGNYVVQKF 484
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
S Q+ + + ++ + L +G R V K +E + +Q L+ L
Sbjct: 485 FVHGSNAQKAVLTKQMEG---HVLSLSLQMYGCRVVQKAIEYVDTAKQAHLI-NELDKHV 540
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ ++ + ++++N + Y +AT GC V+Q +E+ + AQ
Sbjct: 541 LRCVKDQNGNHVIQKAIEKIPPQHIQFIINAFNEQVYQLATHPYGCRVIQRMLEHCEEAQ 600
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++AE+ A L +D YGNYV+QH+L P +++ ++ H + FS +K+ SNV
Sbjct: 601 AA-ILAELHNYAYHLIQDQYGNYVIQHVLEQGAPDDKEAMMLVIKQHVLIFSRHKFASNV 659
Query: 388 VERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSALLVSKVRLFSSP 441
VE+C++ G + R +IE + + +++++ F NYVIQ L VS+ F
Sbjct: 660 VEKCVI-YGNRRQRRALIEEIATEREDGTLPITVMMKDQFANYVIQKLLDVSEGEDFDL- 717
Query: 442 PISVCKP 448
+S+ KP
Sbjct: 718 LVSIIKP 724
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 126/260 (48%), Gaps = 16/260 (6%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ + G++++L+ YGCR +Q+ + + + + E+ V + D GN+V+QK +
Sbjct: 498 KQMEGHVLSLSLQMYGCRVVQKAIEYVDTAKQAHLINELDKHVLRCVKDQNGNHVIQKAI 557
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
E + I ++ + Q+ ++ + +G R + ++LE+ Q + +LA L A
Sbjct: 558 EKIPPQH---IQFIINAFNEQVYQLATHPYGCRVIQRMLEHCEEAQ--AAILAELHNYAY 612
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++ + +D + ++ + + + K V++ CV Y QR
Sbjct: 613 HLIQDQYGNYVIQHVLEQGAPDDKEAMMLVIKQHVLIFSRHKFASNVVEKCVIYGNRRQR 672
Query: 329 ERLVAEIIAN-------ALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ EI ++ +D + NYV+Q LL + + L+ ++ H S
Sbjct: 673 RALIEEIATEREDGTLPITVMMKDQFANYVIQKLLDVSEGEDFDLLVSIIKPHLASLKKY 732
Query: 382 KYGSNV--VERCLL--ESGE 397
YG ++ +ER +L E GE
Sbjct: 733 SYGKHLASIERLVLLSEGGE 752
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 2/138 (1%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
K+ L ++ + + D+ G +Q +E + G ++ + EI ++L L D +GNYVV
Sbjct: 422 KFELKDLQGHIVEFSGDQHGSRFIQQQLESASGEEKSAIFEEIRPSSLQLMTDVFGNYVV 481
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q A L +Q+EGH +S S YG VV++ + + +I EL + +
Sbjct: 482 QKFFVHGSNAQKAVLTKQMEGHVLSLSLQMYGCRVVQKAIEYVDTAKQAHLINELDK--H 539
Query: 413 VSMLLMHPFGNYVIQSAL 430
V + GN+VIQ A+
Sbjct: 540 VLRCVKDQNGNHVIQKAI 557
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE N + L L+ V + D +G IQ ++ S E+ + E+ +
Sbjct: 411 LLEEFRNNKSKKFELKDLQGHIVEFSGDQHGSRFIQQQLESASGEEKSAIFEEIRPSSLQ 470
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q + AQ+ L ++ + L L+ YG VVQ + A
Sbjct: 471 LMTDVFGNYVVQKFFVHGSNAQKAVLTKQMEGHVLSLSLQMYGCRVVQKAIEYVDTAKQA 530
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
L+ +L+ H + ++ G++V+++ +E Q + II V L HP+G V
Sbjct: 531 HLINELDKHVLRCVKDQNGNHVIQKA-IEKIPPQHIQFIINAFNE-QVYQLATHPYGCRV 588
Query: 426 IQSAL 430
IQ L
Sbjct: 589 IQRML 593
>gi|18416639|ref|NP_567733.1| pumilio 6 protein [Arabidopsis thaliana]
gi|75168940|sp|Q9C5E7.1|PUM6_ARATH RecName: Full=Pumilio homolog 6, chloroplastic; Short=APUM-6;
Short=AtPUM6; Flags: Precursor
gi|13430772|gb|AAK26008.1|AF360298_1 putative pumilio protein [Arabidopsis thaliana]
gi|22136912|gb|AAM91800.1| putative pumilio protein [Arabidopsis thaliana]
gi|227206416|dbj|BAH57263.1| AT4G25880 [Arabidopsis thaliana]
gi|332659727|gb|AEE85127.1| pumilio 6 protein [Arabidopsis thaliana]
Length = 861
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 158/309 (51%), Gaps = 21/309 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G+IV + DQ+G R +Q+ + + EE +F E++ C+LM D FGNYV+QK
Sbjct: 530 LSDITGHIVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKF 589
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + QR + L Q+V + L +G R + K L+ + Q++ L L
Sbjct: 590 FEYGNSTQRKELADQLMG---QIVPLSLQMYGCRVIQKALDVIEPDQRVRLA-RELDGQV 645
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ C+++ + ++L ++ GC V+Q +E
Sbjct: 646 MRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDH 705
Query: 328 RERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ R + EI+ + +L++D YGNYV QH+L + + R+L GH V S +K+ SN
Sbjct: 706 QCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASN 765
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVS-----MLLMHPFGNYVIQSAL----------L 431
V+E+C LE G +II+ + P+ S M++ +GNYV+Q L
Sbjct: 766 VIEKC-LEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRLTL 824
Query: 432 VSKVRLFSS 440
S+VR+ +S
Sbjct: 825 FSRVRMHAS 833
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LE L + + L+ + V + D +G IQ +++ E+ + E+ +
Sbjct: 516 FLEELKSGKGRRFDLSDITGHIVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACK 575
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q EY QR+ L +++ + L+ YG V+Q L + P
Sbjct: 576 LMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQRV 635
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
L R+L+G + ++ G++V+++C +E+ ++ R VS L MHP+G V
Sbjct: 636 RLARELDGQVMRCVRDQNGNHVIQKC-IENIPADKVGFMLYAFRG-QVSSLSMHPYGCRV 693
Query: 426 IQSAL 430
IQ L
Sbjct: 694 IQRLL 698
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 2/159 (1%)
Query: 272 KDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERL 331
+ NG + + + S + ++ L+++ + + D+ G +Q +E K ++ +
Sbjct: 506 EGANGPRLCNFLEELKSGKGRRFDLSDITGHIVEFSADQHGSRFIQQKLENCKPEEKAAV 565
Query: 332 VAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERC 391
EI+ +A L D +GNYV+Q L QL G V S YG V+++
Sbjct: 566 FREILPHACKLMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKA 625
Query: 392 LLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
L +Q R+ EL V + GN+VIQ +
Sbjct: 626 LDVIEPDQRVRLAREL--DGQVMRCVRDQNGNHVIQKCI 662
>gi|448103094|ref|XP_004199945.1| Piso0_002501 [Millerozyma farinosa CBS 7064]
gi|359381367|emb|CCE81826.1| Piso0_002501 [Millerozyma farinosa CBS 7064]
Length = 812
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 158/293 (53%), Gaps = 18/293 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+ V KDQ+G R +Q+ + EE E+IF E+ D ELM D FGNYV+QK
Sbjct: 465 LKDIYGHAVEFTKDQHGSRFIQQKLPVSSDEEKEVIFNEIRDIAFELMTDVFGNYVIQKY 524
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ +L + + + + +G R V + LE + QQIS++ L+
Sbjct: 525 FEHGNDVQKEVLLDCMKG---HIYTLSMQMYGCRVVQRALEAIKVHQQISII-EELKDHI 580
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ ++ + K++L + + Y ++T GC V+Q +EYS
Sbjct: 581 LVCAKDQNGNHVIQKSIEKIPFKRIKFVLEALDNQIYHLSTHPYGCRVIQRLLEYSSPDD 640
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ +++ E+ L +D YGNYV+QH+L + +L+ + G V+FS +K+ SNV
Sbjct: 641 QRKILDELNRFIFYLIQDQYGNYVMQHILERGSCEDREEILKVVLGSVVNFSKHKFASNV 700
Query: 388 VERCLLESGEEQSTRIIIELL-------------RSPNVSMLLMHPFGNYVIQ 427
+E+C+ EQ RI+ E++ SP +++++ + NYVIQ
Sbjct: 701 IEKCIKYGDFEQRKRILKEVMIGNEDFNVEVVGDDSP-LALMMKDQYANYVIQ 752
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 18/220 (8%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+I L+ YGCR +QR + ++ + I E+ D + D GN+V+QK +E
Sbjct: 540 MKGHIYTLSMQMYGCRVVQRALEAIKVHQQISIIEELKDHILVCAKDQNGNHVIQKSIEK 599
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ RI +L D Q+ + + +G R + +LLE ++P +L L L
Sbjct: 600 IPFK---RIKFVLEALDNQIYHLSTHPYGCRVIQRLLE-YSSPDDQRKILDELNRFIFYL 655
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YV+Q+ ++ S ED + +L V + + K V++ C++Y QR+R
Sbjct: 656 IQDQYGNYVMQHILERGSCEDREEILKVVLGSVVNFSKHKFASNVIEKCIKYGDFEQRKR 715
Query: 331 LVAEI-IANA-------------LLLAEDCYGNYVVQHLL 356
++ E+ I N L+ +D Y NYV+Q L+
Sbjct: 716 ILKEVMIGNEDFNVEVVGDDSPLALMMKDQYANYVIQKLV 755
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 2/138 (1%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
+Y L ++ + D+ G +Q + S ++E + EI A L D +GNYV+
Sbjct: 462 EYYLKDIYGHAVEFTKDQHGSRFIQQKLPVSSDEEKEVIFNEIRDIAFELMTDVFGNYVI 521
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q LL ++GH + S YG VV+R L Q II EL +
Sbjct: 522 QKYFEHGNDVQKEVLLDCMKGHIYTLSMQMYGCRVVQRALEAIKVHQQISIIEEL--KDH 579
Query: 413 VSMLLMHPFGNYVIQSAL 430
+ + GN+VIQ ++
Sbjct: 580 ILVCAKDQNGNHVIQKSI 597
>gi|356542345|ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1053
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 154/291 (52%), Gaps = 9/291 (3%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
C L ++ G++V + DQYG R +Q+ + + EE M++ E++ LM D FGNYVV
Sbjct: 712 CFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVV 771
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK E QR + L ++ + L +G R + K +E + Q+I +V L
Sbjct: 772 QKFFEHGLASQRRELANKLLG---HVLTLSLQMYGCRVIQKAIEVVDLDQKIEMV-QELD 827
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+ +D NG++VIQ C++ + ++++ D ++T GC V+Q +E+ K
Sbjct: 828 GNVMRCVRDQNGNHVIQKCIECVPEDAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCK 887
Query: 325 G-AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+++++ EI+ +LA+D YGNYVVQH+L P +S++++L V S K+
Sbjct: 888 DPTTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSSIIKELADKIVQMSQQKF 947
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
SNVVE+CL G + ++ ++L + + + ++ F NYV+Q L
Sbjct: 948 ASNVVEKCLTFGGPSERQLLVSQMLGTTDENEPLQAMMKDQFANYVVQKVL 998
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 284 VKHFSHEDTK-YLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLL 342
++ F TK + L+E+A + + D+ G +Q +E + ++ + EI+ +AL L
Sbjct: 702 LEEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALAL 761
Query: 343 AEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTR 402
D +GNYVVQ + L +L GH ++ S YG V+++ + +Q
Sbjct: 762 MTDVFGNYVVQKFFEHGLASQRRELANKLLGHVLTLSLQMYGCRVIQKAIEVVDLDQKIE 821
Query: 403 IIIELLRSPNVSMLLMHPFGNYVIQ 427
++ EL NV + GN+VIQ
Sbjct: 822 MVQEL--DGNVMRCVRDQNGNHVIQ 844
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE + + L+ + V + D G IQ ++ + E+ + E+ +
Sbjct: 701 LLEEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALA 760
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ +QR L +++ + L L+ YG V+Q + +
Sbjct: 761 LMTDVFGNYVVQKFFEHGLASQRRELANKLLGHVLTLSLQMYGCRVIQKAIEVVDLDQKI 820
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++++L+G+ + ++ G++V+++C +E E + I+ V L HP+G V
Sbjct: 821 EMVQELDGNVMRCVRDQNGNHVIQKC-IECVPEDAIHFIVSTFFD-QVVTLSTHPYGCRV 878
Query: 426 IQSAL 430
IQ L
Sbjct: 879 IQRVL 883
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDP 198
S +++L IV +++ ++ +++ ++ E +++ +++ E +M D
Sbjct: 929 SSIIKELADKIVQMSQQKFASNVVEKCLTFGGPSERQLLVSQMLGTTDENEPLQAMMKDQ 988
Query: 199 FGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
F NYVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 989 FANYVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIVSRVEKLV 1037
>gi|340719709|ref|XP_003398290.1| PREDICTED: pumilio homolog 1-like [Bombus terrestris]
Length = 1239
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 164/306 (53%), Gaps = 10/306 (3%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL +IV ++DQ+G R +Q+ + E +++F E++
Sbjct: 857 RSRLLEDFRNNRFPSLQLRDLANHIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTS 916
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
LM D FGNYV+QK E + EQ++ + + ++ + L +G R + K LE++
Sbjct: 917 AYSLMTDVFGNYVIQKFFEFGTPEQKSTLAQKVRG---HVLPLALQMYGCRVIQKALESI 973
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
P+Q ++ L + KD NG++V+Q C++ ++++ A Y ++T
Sbjct: 974 -GPEQQQEIVRELDGHVLKCVKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHP 1032
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q + ++ E+ A L +D YGNYV+QH+L P+ A L+
Sbjct: 1033 YGCRVIQRILEHCTPEQTQGILQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISS 1092
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQS 428
+ G ++ S +K+ SNVVE+C+ + ++ +I E+ +++++ + NYV+Q
Sbjct: 1093 VRGKVLTLSQHKFASNVVEKCVTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQK 1152
Query: 429 ALLVSK 434
+ V++
Sbjct: 1153 MIDVAE 1158
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 127/244 (52%), Gaps = 8/244 (3%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ +RG+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +
Sbjct: 947 QKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVRELDGHVLKCVKDQNGNHVVQKCI 1006
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
E C E + + ++ Q+ + + +G R + ++LE+ T P+Q +L L
Sbjct: 1007 E-CVEPRALQFVIGAFAG--QVYSLSTHPYGCRVIQRILEHCT-PEQTQGILQELHAATD 1062
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED L++ V ++ K V++ CV ++ +R
Sbjct: 1063 QLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQHKFASNVVEKCVTHATRQER 1122
Query: 329 ERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H S YG
Sbjct: 1123 AVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKVLMHKIRPHLGSLRKYTYG 1182
Query: 385 SNVV 388
+++
Sbjct: 1183 KHII 1186
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 62/140 (44%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L++L L +DQYG +Q + E+ + V +V L F + VV+K
Sbjct: 1054 LQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQHKFASNVVEKC 1113
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + ++R ++ + + + + + V++ + ++ P Q +++ +RP
Sbjct: 1114 VTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKVLMHKIRPHL 1173
Query: 268 VTLTKDTNGHYVIQYCVKHF 287
+L K T G ++I K F
Sbjct: 1174 GSLRKYTYGKHIIVKLEKFF 1193
>gi|350400877|ref|XP_003485990.1| PREDICTED: pumilio homolog 1-like [Bombus impatiens]
Length = 1240
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 164/306 (53%), Gaps = 10/306 (3%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL +IV ++DQ+G R +Q+ + E +++F E++
Sbjct: 858 RSRLLEDFRNNRFPSLQLRDLANHIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTS 917
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
LM D FGNYV+QK E + EQ++ + + ++ + L +G R + K LE++
Sbjct: 918 AYSLMTDVFGNYVIQKFFEFGTPEQKSTLAQKVRG---HVLPLALQMYGCRVIQKALESI 974
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
P+Q ++ L + KD NG++V+Q C++ ++++ A Y ++T
Sbjct: 975 -GPEQQQEIVRELDGHVLKCVKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHP 1033
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q + ++ E+ A L +D YGNYV+QH+L P+ A L+
Sbjct: 1034 YGCRVIQRILEHCTPEQTQGILQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISS 1093
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQS 428
+ G ++ S +K+ SNVVE+C+ + ++ +I E+ +++++ + NYV+Q
Sbjct: 1094 VRGKVLTLSQHKFASNVVEKCVTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQK 1153
Query: 429 ALLVSK 434
+ V++
Sbjct: 1154 MIDVAE 1159
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 127/244 (52%), Gaps = 8/244 (3%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ +RG+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +
Sbjct: 948 QKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVRELDGHVLKCVKDQNGNHVVQKCI 1007
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
E C E + + ++ Q+ + + +G R + ++LE+ T P+Q +L L
Sbjct: 1008 E-CVEPRALQFVIGAFAG--QVYSLSTHPYGCRVIQRILEHCT-PEQTQGILQELHAATD 1063
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED L++ V ++ K V++ CV ++ +R
Sbjct: 1064 QLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQHKFASNVVEKCVTHATRQER 1123
Query: 329 ERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H S YG
Sbjct: 1124 AVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKVLMHKIRPHLGSLRKYTYG 1183
Query: 385 SNVV 388
+++
Sbjct: 1184 KHII 1187
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 62/140 (44%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L++L L +DQYG +Q + E+ + V +V L F + VV+K
Sbjct: 1055 LQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQHKFASNVVEKC 1114
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + ++R ++ + + + + + V++ + ++ P Q +++ +RP
Sbjct: 1115 VTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKVLMHKIRPHL 1174
Query: 268 VTLTKDTNGHYVIQYCVKHF 287
+L K T G ++I K F
Sbjct: 1175 GSLRKYTYGKHIIVKLEKFF 1194
>gi|294953151|ref|XP_002787620.1| pumilio, putative [Perkinsus marinus ATCC 50983]
gi|239902644|gb|EER19416.1| pumilio, putative [Perkinsus marinus ATCC 50983]
Length = 645
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 155/291 (53%), Gaps = 8/291 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ + V LA DQYG R LQ + + E +F+ V+ +L DPFGNYV+QKL
Sbjct: 291 LGDVAADAVELAMDQYGSRFLQNALETATPSERHDVFLAVLSSAQQLTTDPFGNYVIQKL 350
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+ EE + L D ++R+ + +G R V K+LEN+ QQ+ L++ L+
Sbjct: 351 FDHLPEEHIVILSEQLLGD---ILRLSFHMYGCRVVQKVLENVNAEQQV-LIVNELKGHV 406
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V +D NG++VIQ C++ + ++++E N ++ GC V+Q +E
Sbjct: 407 VDCVEDQNGNHVIQKCIETLPTQTLGFIVDEFRGNVTRMSLHCYGCRVVQRLIERLPEEM 466
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
E L+ E++ N +L++D YGNYVVQH++ ++++ + + + C+K+ SNV
Sbjct: 467 SEPLMQEVVENLWMLSQDQYGNYVVQHVVEHGPNNFKNAVVKAVAANIEQYGCHKFASNV 526
Query: 388 VERCLLESGEEQSTRIIIELLRS--PNVSM--LLMHPFGNYVIQSALLVSK 434
VE+ LL + II ++ S P+ + + + F NYV+Q L +S+
Sbjct: 527 VEKALLSGSRQNQDEIIGAVIGSAGPDAPLHSMTVDKFANYVVQRCLELSQ 577
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 113/247 (45%), Gaps = 52/247 (21%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G+I+ L+ YGCR +Q+ + ++ E+ +I E+ V + + D GN+V+QK
Sbjct: 366 LLGDILRLSFHMYGCRVVQKVLENVNAEQQVLIVNELKGHVVDCVEDQNGNHVIQK---- 421
Query: 211 CSEEQRTRILLMLTNDDFQ--LVRICLNTHGIRAVLKLLENLTNPQQIS-LVLAALRPGA 267
C E T+ L + D+F+ + R+ L+ +G R V +L+E L P+++S ++ +
Sbjct: 422 CIETLPTQTLGFIV-DEFRGNVTRMSLHCYGCRVVQRLIERL--PEEMSEPLMQEVVENL 478
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADN-----CYGIAT-------------- 308
L++D G+YV+Q+ V+H + ++ VA N C+ A+
Sbjct: 479 WMLSQDQYGNYVVQHVVEHGPNNFKNAVVKAVAANIEQYGCHKFASNVVEKALLSGSRQN 538
Query: 309 -----------------------DKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAED 345
DK V+Q C+E S+G RE LV + + L +
Sbjct: 539 QDEIIGAVIGSAGPDAPLHSMTVDKFANYVVQRCLELSQGTNREHLVNMLQLDLPNLRKV 598
Query: 346 CYGNYVV 352
YG ++
Sbjct: 599 TYGKHIA 605
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 23/149 (15%)
Query: 119 LSSVPRNQWMSSLSLKRNQWLQ-------DSFDCSSLRDLRGNIVALAKDQYGCRH---- 167
+ V N WM S N +Q ++F + ++ + NI +QYGC
Sbjct: 471 MQEVVENLWMLSQDQYGNYVVQHVVEHGPNNFKNAVVKAVAANI-----EQYGCHKFASN 525
Query: 168 -LQRTMSSLPKEEIEMIFVEVIDRVC------ELMIDPFGNYVVQKLVELCSEEQRTRIL 220
+++ + S ++ + I VI + +D F NYVVQ+ +EL R ++
Sbjct: 526 VVEKALLSGSRQNQDEIIGAVIGSAGPDAPLHSMTVDKFANYVVQRCLELSQGTNREHLV 585
Query: 221 LMLTNDDFQLVRICLNTHGIRAVLKLLEN 249
ML D L ++ H AV KL++N
Sbjct: 586 NMLQLDLPNLRKVTYGKHIASAVEKLIQN 614
>gi|30685690|ref|NP_188660.3| pumilio 5 [Arabidopsis thaliana]
gi|313471415|sp|Q9LJX4.2|PUM5_ARATH RecName: Full=Pumilio homolog 5; Short=APUM-5; Short=AtPUM5
gi|332642831|gb|AEE76352.1| pumilio 5 [Arabidopsis thaliana]
Length = 961
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 151/292 (51%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G +V + DQ+G R +Q+ + EE +F EV+ + +LM D FGNYV+QK
Sbjct: 626 LSDIAGRVVEFSVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKF 685
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E + QR ++ L Q+V + L +G R + K LE + Q+ L+ L
Sbjct: 686 IEHGTPAQREELVKQLAG---QMVSLSLQMYGCRVIQKALEVIDVDQKTELI-RELDGNV 741
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGA 326
+ +D NG++VIQ C++ +++ ++T GC V+Q +E+ S
Sbjct: 742 LKCVRDQNGNHVIQKCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDE 801
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ ++ EI+ +A LA D YGNYV QH+L P ++ +L G+ V S +KY SN
Sbjct: 802 ETHCIIDEILESAFALAHDQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMSQHKYASN 861
Query: 387 VVERCLLESGEEQSTRIIIELLRSP----NVSMLLMHPFGNYVIQSALLVSK 434
VVE+CL + + +I E++ ++ ++ F NYV+Q L +SK
Sbjct: 862 VVEKCLEHADSTEREFLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVLEISK 913
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
L+ L +P L L+ + V + D +G IQ ++H S E+ + +EV
Sbjct: 612 FLDELKSPNARKLELSDIAGRVVEFSVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASK 671
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q +E+ AQRE LV ++ + L+ YG V+Q L +
Sbjct: 672 LMTDVFGNYVIQKFIEHGTPAQREELVKQLAGQMVSLSLQMYGCRVIQKALEVIDVDQKT 731
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
L+R+L+G+ + ++ G++V+++C +ES +I R V+ L HP+G V
Sbjct: 732 ELIRELDGNVLKCVRDQNGNHVIQKC-IESMPAGRIGFVIAAFRG-QVATLSTHPYGCRV 789
Query: 426 IQSAL 430
IQ L
Sbjct: 790 IQRIL 794
>gi|328786740|ref|XP_391849.4| PREDICTED: pumilio homolog 2 [Apis mellifera]
Length = 1240
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 164/306 (53%), Gaps = 10/306 (3%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL +IV ++DQ+G R +Q+ + E +++F E++
Sbjct: 858 RSRLLEDFRNNRFPSLQLRDLANHIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTS 917
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
LM D FGNYV+QK E + EQ++ + + ++ + L +G R + K LE++
Sbjct: 918 AYSLMTDVFGNYVIQKFFEFGTPEQKSTLAQKVRG---HVLPLALQMYGCRVIQKALESI 974
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
P+Q ++ L + KD NG++V+Q C++ ++++ A Y ++T
Sbjct: 975 -GPEQQQEIVRELDGHVLKCVKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHP 1033
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q + ++ E+ A L +D YGNYV+QH+L P+ A L+
Sbjct: 1034 YGCRVIQRILEHCTPEQTQGILQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISS 1093
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQS 428
+ G ++ S +K+ SNVVE+C+ + ++ +I E+ +++++ + NYV+Q
Sbjct: 1094 VRGKVLTLSQHKFASNVVEKCVTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQK 1153
Query: 429 ALLVSK 434
+ V++
Sbjct: 1154 MIDVAE 1159
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 127/244 (52%), Gaps = 8/244 (3%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ +RG+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +
Sbjct: 948 QKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVRELDGHVLKCVKDQNGNHVVQKCI 1007
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
E C E + + ++ Q+ + + +G R + ++LE+ T P+Q +L L
Sbjct: 1008 E-CVEPRALQFVIGAFAG--QVYSLSTHPYGCRVIQRILEHCT-PEQTQGILQELHAATD 1063
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED L++ V ++ K V++ CV ++ +R
Sbjct: 1064 QLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQHKFASNVVEKCVTHATRQER 1123
Query: 329 ERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H S YG
Sbjct: 1124 AVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKVLMHKIRPHLGSLRKYTYG 1183
Query: 385 SNVV 388
+++
Sbjct: 1184 KHII 1187
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 62/140 (44%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L++L L +DQYG +Q + E+ + V +V L F + VV+K
Sbjct: 1055 LQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQHKFASNVVEKC 1114
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + ++R ++ + + + + + V++ + ++ P Q +++ +RP
Sbjct: 1115 VTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKVLMHKIRPHL 1174
Query: 268 VTLTKDTNGHYVIQYCVKHF 287
+L K T G ++I K F
Sbjct: 1175 GSLRKYTYGKHIIVKLEKFF 1194
>gi|380029756|ref|XP_003698531.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 2-like [Apis florea]
Length = 1240
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 164/306 (53%), Gaps = 10/306 (3%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL +IV ++DQ+G R +Q+ + E +++F E++
Sbjct: 858 RSRLLEDFRNNRFPSLQLRDLANHIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTS 917
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
LM D FGNYV+QK E + EQ++ + + ++ + L +G R + K LE++
Sbjct: 918 AYSLMTDVFGNYVIQKFFEFGTPEQKSTLAQKVRG---HVLPLALQMYGCRVIQKALESI 974
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
P+Q ++ L + KD NG++V+Q C++ ++++ A Y ++T
Sbjct: 975 -GPEQQQEIVRELDGHVLKCVKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHP 1033
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q + ++ E+ A L +D YGNYV+QH+L P+ A L+
Sbjct: 1034 YGCRVIQRILEHCTPEQTQGILQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISS 1093
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQS 428
+ G ++ S +K+ SNVVE+C+ + ++ +I E+ +++++ + NYV+Q
Sbjct: 1094 VRGKVLTLSQHKFASNVVEKCVTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQK 1153
Query: 429 ALLVSK 434
+ V++
Sbjct: 1154 MIDVAE 1159
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 127/244 (52%), Gaps = 8/244 (3%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ +RG+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +
Sbjct: 948 QKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVRELDGHVLKCVKDQNGNHVVQKCI 1007
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
E C E + + ++ Q+ + + +G R + ++LE+ T P+Q +L L
Sbjct: 1008 E-CVEPRALQFVIGAFAG--QVYSLSTHPYGCRVIQRILEHCT-PEQTQGILQELHAATD 1063
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED L++ V ++ K V++ CV ++ +R
Sbjct: 1064 QLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQHKFASNVVEKCVTHATRQER 1123
Query: 329 ERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H S YG
Sbjct: 1124 AVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKVLMHKIRPHLGSLRKYTYG 1183
Query: 385 SNVV 388
+++
Sbjct: 1184 KHII 1187
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 62/140 (44%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L++L L +DQYG +Q + E+ + V +V L F + VV+K
Sbjct: 1055 LQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQHKFASNVVEKC 1114
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + ++R ++ + + + + + V++ + ++ P Q +++ +RP
Sbjct: 1115 VTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKVLMHKIRPHL 1174
Query: 268 VTLTKDTNGHYVIQYCVKHF 287
+L K T G ++I K F
Sbjct: 1175 GSLRKYTYGKHIIVKLEKFF 1194
>gi|237506877|gb|ACQ99191.1| pumilio [Bombyx mori]
Length = 364
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 161/306 (52%), Gaps = 7/306 (2%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL +IV ++DQ+G R +Q+ + +E +M+F E+I
Sbjct: 7 RSRLLEDFRNNRFPNLQLRDLANHIVEFSQDQHGSRFVQQKLERATVQEKQMVFNEIIGA 66
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
LM D FGNYV+QK E + EQ+T + + ++ + L +G R + K LE++
Sbjct: 67 AYSLMTDVFGNYVIQKFFEPGTTEQKTTLAQKVVQVRGHVLNLALQMYGCRVIQKALESI 126
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
P+Q V+ L + KD NG++V+Q C++ ++++N A Y ++T
Sbjct: 127 P-PEQQQEVVRKLDGHVLKCVKDQNGNHVVQKCIECVEPSALQFIINAFAGQVYALSTHP 185
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ A+ L D YGNYVVQH+L + + L+
Sbjct: 186 YGCSVIQRILEHCTPEQTAPVLNELHAHTDQLITDQYGNYVVQHVLEHGAGEDRSRLVAA 245
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQS 428
+ G + S +K+ SNVVE+C+ + + +I EL + +++ F NYV+Q
Sbjct: 246 VRGKVLQLSQHKFASNVVEKCVTHATRNERALLIDELCGFNDNALHVMMKDQFANYVVQK 305
Query: 429 ALLVSK 434
+ V++
Sbjct: 306 MIDVAE 311
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 116/257 (45%), Gaps = 50/257 (19%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+P E+ + + ++ V + + D GN+VVQK +E
Sbjct: 102 VRGHVLNLALQMYGCRVIQKALESIPPEQQQEVVRKLDGHVLKCVKDQNGNHVVQKCIE- 160
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C E + ++ + F L+TH G + ++LE+ T P+Q + VL L
Sbjct: 161 CVEPSALQFII----NAFAGQVYALSTHPYGCSVIQRILEHCT-PEQTAPVLNELHAHTD 215
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L D G+YV+Q+ ++H + ED L+ V ++ K V++ CV ++ +R
Sbjct: 216 QLITDQYGNYVVQHVLEHGAGEDRSRLVAAVRGKVLQLSQHKFASNVVEKCVTHATRNER 275
Query: 329 ERLVAEIIA---NAL-LLAED------------------------------------CYG 348
L+ E+ NAL ++ +D YG
Sbjct: 276 ALLIDELCGFNDNALHVMMKDQFANYVVQKMIDVAEPTQRKVLMHKIRPHIGSLRKYTYG 335
Query: 349 NYVVQHL--LALRVPQI 363
+++ L ++ P++
Sbjct: 336 KHIIAKLEKFFMKAPEL 352
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 61/140 (43%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +L + L DQYG +Q + E+ + V +V +L F + VV+K
Sbjct: 207 LNELHAHTDQLITDQYGNYVVQHVLEHGAGEDRSRLVAAVRGKVLQLSQHKFASNVVEKC 266
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + +R ++ L + + + + V++ + ++ P Q +++ +RP
Sbjct: 267 VTHATRNERALLIDELCGFNDNALHVMMKDQFANYVVQKMIDVAEPTQRKVLMHKIRPHI 326
Query: 268 VTLTKDTNGHYVIQYCVKHF 287
+L K T G ++I K F
Sbjct: 327 GSLRKYTYGKHIIAKLEKFF 346
>gi|290973641|ref|XP_002669556.1| Pumilio/Puf RNA-binding protein [Naegleria gruberi]
gi|284083105|gb|EFC36812.1| Pumilio/Puf RNA-binding protein [Naegleria gruberi]
Length = 788
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 152/291 (52%), Gaps = 12/291 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G++V ++DQ+G R +Q+ + E E+IF E+ LM D FGNYV+QK
Sbjct: 459 LHDIVGHVVEFSRDQHGSRFIQQKLEKASNSEKELIFKEIQPYALSLMTDVFGNYVIQKF 518
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + Q+ ++ L + ++ + L T+G R + K LE + N + V++ L+
Sbjct: 519 FEFGNAPQKKKLSKELQGN---VLNLTLQTYGCRVIQKALEVIDNDDK-DTVVSELKGNV 574
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ C++ + +++++ Y A GC V+Q +E+ Q
Sbjct: 575 MRCVQDQNGNHVIQKCIERVPPKIIQFIVDGFKGKVYEQAIHNYGCRVIQRILEHCTEGQ 634
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ EI+ N L L D YGNYVVQH+L P + ++ L S NK+ SNV
Sbjct: 635 TVPILQEILDNILALVVDPYGNYVVQHVLDRGKPTFKSLIIAALSKKIQELSINKFASNV 694
Query: 388 VERCLLESGEEQSTRIIIEL---LRSPNVS-----MLLMHPFGNYVIQSAL 430
+E+C ++ +++ +I EL + S ++S ++ F NYVIQ +
Sbjct: 695 IEKCFQQANKKERDNMITELIGDITSRDISETPLFAMMKDQFANYVIQKII 745
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
K+ L+++ + + D+ G +Q +E + +++E + EI AL L D +GNYV+
Sbjct: 456 KFELHDIVGHVVEFSRDQHGSRFIQQKLEKASNSEKELIFKEIQPYALSLMTDVFGNYVI 515
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q L ++L+G+ ++ + YG V+++ L + ++ EL N
Sbjct: 516 QKFFEFGNAPQKKKLSKELQGNVLNLTLQTYGCRVIQKALEVIDNDDKDTVVSEL--KGN 573
Query: 413 VSMLLMHPFGNYVIQSAL 430
V + GN+VIQ +
Sbjct: 574 VMRCVQDQNGNHVIQKCI 591
>gi|297746040|emb|CBI16096.3| unnamed protein product [Vitis vinifera]
Length = 360
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 158/291 (54%), Gaps = 9/291 (3%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
C L ++ G++V + DQYG R +Q+ + + EE M++ E+I + LM D FGNYV+
Sbjct: 20 CFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIIPQALSLMTDVFGNYVI 79
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK E QR + L ++ + L +G R + K +E + Q+I +V L
Sbjct: 80 QKFFEHGLVSQRRELAGKLYG---HVLTLSLQMYGCRVIQKAIEVVDPDQKIKMV-EELD 135
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+ +D NG++VIQ C++ + +++++ D ++T GC V+Q +E+ +
Sbjct: 136 GHIMRCVRDQNGNHVIQKCIECVPEDAIQFIISTFFDQVVTLSTHPYGCRVIQRVLEHCR 195
Query: 325 GAQRE-RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+ + +++ EI+ + +LA+D YGNYVVQH+L P ++++++L G V S K+
Sbjct: 196 DPKTQSKVMDEILGSVSMLAQDQYGNYVVQHVLEHGQPHERSAIIKELAGKIVQMSQQKF 255
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
SNVVE+CL G + ++ E+L + + + ++ F NYV+Q L
Sbjct: 256 ASNVVEKCLTFGGPAERQILVNEMLGTTDENEPLQAMMKDQFANYVVQKVL 306
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE + + L+ + V + D G IQ ++ + E+ + E+
Sbjct: 9 LLEEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIIPQALS 68
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ +QR L ++ + L L+ YG V+Q + + P
Sbjct: 69 LMTDVFGNYVIQKFFEHGLVSQRRELAGKLYGHVLTLSLQMYGCRVIQKAIEVVDPDQKI 128
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++ +L+GH + ++ G++V+++C +E E + + II V+ L HP+G V
Sbjct: 129 KMVEELDGHIMRCVRDQNGNHVIQKC-IECVPEDAIQFIISTFFDQVVT-LSTHPYGCRV 186
Query: 426 IQSAL 430
IQ L
Sbjct: 187 IQRVL 191
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L G IV +++ ++ +++ ++ E +++ E++ E +M D F N
Sbjct: 240 IKELAGKIVQMSQQKFASNVVEKCLTFGGPAERQILVNEMLGTTDENEPLQAMMKDQFAN 299
Query: 202 YVVQKLVELCSEEQRTRIL 220
YVVQK++E C ++QR IL
Sbjct: 300 YVVQKVLETCDDQQRELIL 318
>gi|224059464|ref|XP_002299859.1| predicted protein [Populus trichocarpa]
gi|222847117|gb|EEE84664.1| predicted protein [Populus trichocarpa]
Length = 1065
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 159/291 (54%), Gaps = 9/291 (3%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
C L ++ G++V + DQYG R +Q+ + + +E +++ E++ + LM D FGNYV+
Sbjct: 725 CLELSEIVGHVVEFSADQYGSRFIQQKLETATMDEKNVVYEEIMPQALPLMTDVFGNYVI 784
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK E QR + L ++ + L +G R + K +E + Q+I +V L
Sbjct: 785 QKFFEHGLPSQRRELAGNLFG---HVLTLSLQMYGCRVIQKAIEVVDLDQKIKMV-EELD 840
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+ +D NG++VIQ C++ ++ +++++ D ++T GC V+Q +E+ K
Sbjct: 841 GHVMRCVRDQNGNHVIQKCIECIPEDNIQFIVSTFFDQVVNLSTHPYGCRVIQRILEHCK 900
Query: 325 GAQRE-RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
A+ E +++ EI+ +LA+D YGNYVVQH+L ++++++L G V S K+
Sbjct: 901 DAKTESKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKSHERSAIIKELAGKIVQMSQQKF 960
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
SNVVE+CL SG + ++ E+L + + + ++ F NYV+Q L
Sbjct: 961 ASNVVEKCLTFSGPAERQILVNEMLGTTDENEPLQAMMKDQFANYVVQKVL 1011
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 130/260 (50%), Gaps = 11/260 (4%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
+L G+++ L+ YGCR +Q+ + + ++ + E+ V + D GN+V+QK +E
Sbjct: 802 NLFGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVEELDGHVMRCVRDQNGNHVIQKCIE 861
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
C E + ++ D Q+V + + +G R + ++LE+ + + S V+ +
Sbjct: 862 -CIPEDNIQFIVSTFFD--QVVNLSTHPYGCRVIQRILEHCKDAKTESKVMDEILGAVSM 918
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
L +D G+YV+Q+ ++H + ++ E+A ++ K V++ C+ +S A+R+
Sbjct: 919 LAQDQYGNYVVQHVLEHGKSHERSAIIKELAGKIVQMSQQKFASNVVEKCLTFSGPAERQ 978
Query: 330 RLVAEIIANA------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
LV E++ + +D + NYVVQ +L Q +L +++ H + Y
Sbjct: 979 ILVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILTRIKVHLNALKKYTY 1038
Query: 384 GSNVVERC--LLESGEEQST 401
G ++V R L+ +GE +S
Sbjct: 1039 GKHIVARVEKLVAAGERRSA 1058
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE + + L L+ + V + D G IQ ++ + ++ + E+
Sbjct: 714 LLEEFKSNKTKCLELSEIVGHVVEFSADQYGSRFIQQKLETATMDEKNVVYEEIMPQALP 773
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ +QR L + + L L+ YG V+Q + +
Sbjct: 774 LMTDVFGNYVIQKFFEHGLPSQRRELAGNLFGHVLTLSLQMYGCRVIQKAIEVVDLDQKI 833
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++ +L+GH + ++ G++V+++C +E E + + I+ V L HP+G V
Sbjct: 834 KMVEELDGHVMRCVRDQNGNHVIQKC-IECIPEDNIQFIVSTFFD-QVVNLSTHPYGCRV 891
Query: 426 IQSAL 430
IQ L
Sbjct: 892 IQRIL 896
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L G IV +++ ++ +++ ++ E +++ E++ E +M D F N
Sbjct: 945 IKELAGKIVQMSQQKFASNVVEKCLTFSGPAERQILVNEMLGTTDENEPLQAMMKDQFAN 1004
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 1005 YVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHIVARVEKLV 1050
>gi|448099238|ref|XP_004199094.1| Piso0_002501 [Millerozyma farinosa CBS 7064]
gi|359380516|emb|CCE82757.1| Piso0_002501 [Millerozyma farinosa CBS 7064]
Length = 812
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 158/293 (53%), Gaps = 18/293 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+ V KDQ+G R +Q+ + EE E+IF E+ D ELM D FGNYV+QK
Sbjct: 465 LKDIYGHAVEFTKDQHGSRFIQQKLPVSSDEEKEVIFNEIRDIAFELMTDVFGNYVIQKY 524
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ +L + + + + +G R V + LE + QQI L++ L+
Sbjct: 525 FEHGNDVQKEVLLDCMKG---HIYTLSMQMYGCRVVQRALEAIKVHQQI-LIIEELKDHI 580
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ ++ + K++L + + Y ++T GC V+Q +E+S
Sbjct: 581 LVCAKDQNGNHVIQKSIEKIPFKRIKFVLEALDNQIYHLSTHPYGCRVIQRLLEFSSPDD 640
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ +++ E+ L +D YGNYV+QH+L + +L+ + G V+FS +K+ SNV
Sbjct: 641 QRKILNELNRFIFYLIQDQYGNYVMQHILERGSYEDREEILKVVLGSVVNFSKHKFASNV 700
Query: 388 VERCLLESGEEQSTRIIIELL-------------RSPNVSMLLMHPFGNYVIQ 427
+E+C+ EQ RI+ E++ SP +++++ + NYVIQ
Sbjct: 701 IEKCIKYGDFEQRKRILKEVMIGNEDFNVEVVGDDSP-LALMMKDQYANYVIQ 752
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 110/220 (50%), Gaps = 18/220 (8%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+I L+ YGCR +QR + ++ + +I E+ D + D GN+V+QK +E
Sbjct: 540 MKGHIYTLSMQMYGCRVVQRALEAIKVHQQILIIEELKDHILVCAKDQNGNHVIQKSIEK 599
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ RI +L D Q+ + + +G R + +LLE ++P +L L L
Sbjct: 600 IPFK---RIKFVLEALDNQIYHLSTHPYGCRVIQRLLE-FSSPDDQRKILNELNRFIFYL 655
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YV+Q+ ++ S+ED + +L V + + K V++ C++Y QR+R
Sbjct: 656 IQDQYGNYVMQHILERGSYEDREEILKVVLGSVVNFSKHKFASNVIEKCIKYGDFEQRKR 715
Query: 331 LVAEI-IANA-------------LLLAEDCYGNYVVQHLL 356
++ E+ I N L+ +D Y NYV+Q L+
Sbjct: 716 ILKEVMIGNEDFNVEVVGDDSPLALMMKDQYANYVIQKLV 755
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
+Y L ++ + D+ G +Q + S ++E + EI A L D +GNYV+
Sbjct: 462 EYYLKDIYGHAVEFTKDQHGSRFIQQKLPVSSDEEKEVIFNEIRDIAFELMTDVFGNYVI 521
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q LL ++GH + S YG VV+R LE+ + +IIE L+ +
Sbjct: 522 QKYFEHGNDVQKEVLLDCMKGHIYTLSMQMYGCRVVQRA-LEAIKVHQQILIIEELKD-H 579
Query: 413 VSMLLMHPFGNYVIQSAL 430
+ + GN+VIQ ++
Sbjct: 580 ILVCAKDQNGNHVIQKSI 597
>gi|307187049|gb|EFN72338.1| Maternal protein pumilio [Camponotus floridanus]
Length = 787
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 181/354 (51%), Gaps = 14/354 (3%)
Query: 91 AEPINQDSSILNLLHNHNFDGLRSNGNELSSVPRNQWMSSLSLK----RNQWLQD----S 142
AE + S++ L N F S L P +++S K R++ L+D
Sbjct: 351 AEAKFRASAVPALTANGVFGSSSSLFPNLVGKPGRGGAANISDKNAGGRSRLLEDFRNNR 410
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F LRDL +IV ++DQ+G R +Q+ + E +++F E++ LM D FGNY
Sbjct: 411 FPSLQLRDLANHIVEFSQDQHGSRFIQQKLERASANEKQLVFQEILSSAYSLMTDVFGNY 470
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
V+QK E + EQ++ + + ++ + L +G R + K LE++ P+Q ++
Sbjct: 471 VIQKFFEYGTPEQKSTLAQKVRG---HVLPLALQMYGCRVIQKALESIA-PEQQQEIVRE 526
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L + KD NG++V+Q C++ ++++ A Y ++T GC V+Q +E+
Sbjct: 527 LDGHVLKCVKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEH 586
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
Q + ++ E+ A L +D YGNYV+QH+L P+ A L+ + G ++ S +K
Sbjct: 587 CTAEQTQGILQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLIGSVRGKVLALSQHK 646
Query: 383 YGSNVVERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
+ SNVVE+C+ + ++ +I E+ +++++ + NYV+Q + V++
Sbjct: 647 FASNVVEKCVTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAE 700
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 126/246 (51%), Gaps = 8/246 (3%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ +RG+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +
Sbjct: 489 QKVRGHVLPLALQMYGCRVIQKALESIAPEQQQEIVRELDGHVLKCVKDQNGNHVVQKCI 548
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
E C E + + ++ Q+ + + +G R + ++LE+ T +Q +L L
Sbjct: 549 E-CVEPRALQFVIGAFAG--QVYSLSTHPYGCRVIQRILEHCTA-EQTQGILQELHAATD 604
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED L+ V ++ K V++ CV ++ +R
Sbjct: 605 QLIQDQYGNYVIQHVLEHGKPEDKAQLIGSVRGKVLALSQHKFASNVVEKCVTHATRQER 664
Query: 329 ERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H S YG
Sbjct: 665 AVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKILMHKIRPHLGSLRKYTYG 724
Query: 385 SNVVER 390
+++ +
Sbjct: 725 KHIIVK 730
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 62/140 (44%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L++L L +DQYG +Q + E+ + V +V L F + VV+K
Sbjct: 596 LQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKAQLIGSVRGKVLALSQHKFASNVVEKC 655
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + ++R ++ + + + + + V++ + ++ P Q +++ +RP
Sbjct: 656 VTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKILMHKIRPHL 715
Query: 268 VTLTKDTNGHYVIQYCVKHF 287
+L K T G ++I K F
Sbjct: 716 GSLRKYTYGKHIIVKLEKFF 735
>gi|356538980|ref|XP_003537978.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1047
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 155/291 (53%), Gaps = 9/291 (3%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
C L ++ G++V + DQYG R +Q+ + + EE +M++ E++ LM D FGNYVV
Sbjct: 706 CFELSEIVGHVVEFSADQYGSRFIQQKLETATTEEKKMVYQEIMPHALALMTDVFGNYVV 765
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK E QR + L ++ + L +G R + K +E + Q+I +V L
Sbjct: 766 QKFFEHGLASQRRELANKLLG---HVLTLSLQMYGCRVIQKAIEVVDLDQKIEMV-QELD 821
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+ +D NG++VIQ C++ + ++++ D ++T GC V+Q +E+ +
Sbjct: 822 GNVMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCE 881
Query: 325 G-AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+++++ EI+ +LA+D YGNYVVQH+L +S++++L G V S K+
Sbjct: 882 DPTTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKSHERSSIIKELAGKIVQMSQQKF 941
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
SNVVE+CL G + ++ E+L + + + ++ F NYV+Q L
Sbjct: 942 ASNVVEKCLTFGGPSERQLLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL 992
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 284 VKHFSHEDTK-YLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLL 342
++ F TK + L+E+ + + D+ G +Q +E + +++ + EI+ +AL L
Sbjct: 696 LEEFKSNKTKCFELSEIVGHVVEFSADQYGSRFIQQKLETATTEEKKMVYQEIMPHALAL 755
Query: 343 AEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTR 402
D +GNYVVQ + L +L GH ++ S YG V+++ + +Q
Sbjct: 756 MTDVFGNYVVQKFFEHGLASQRRELANKLLGHVLTLSLQMYGCRVIQKAIEVVDLDQKIE 815
Query: 403 IIIELLRSPNVSMLLMHPFGNYVIQ 427
++ EL NV + GN+VIQ
Sbjct: 816 MVQEL--DGNVMRCVRDQNGNHVIQ 838
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 86/185 (46%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE + + L+ + V + D G IQ ++ + E+ K + E+ +
Sbjct: 695 LLEEFKSNKTKCFELSEIVGHVVEFSADQYGSRFIQQKLETATTEEKKMVYQEIMPHALA 754
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ +QR L +++ + L L+ YG V+Q + +
Sbjct: 755 LMTDVFGNYVVQKFFEHGLASQRRELANKLLGHVLTLSLQMYGCRVIQKAIEVVDLDQKI 814
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++++L+G+ + ++ G++V+++C +E E + I+ V L HP+G V
Sbjct: 815 EMVQELDGNVMRCVRDQNGNHVIQKC-IECVPEDAIDFIVSTFFD-QVVTLSTHPYGCRV 872
Query: 426 IQSAL 430
IQ L
Sbjct: 873 IQRVL 877
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDP 198
S +++L G IV +++ ++ +++ ++ E +++ E++ E +M D
Sbjct: 923 SSIIKELAGKIVQMSQQKFASNVVEKCLTFGGPSERQLLVNEMLGTTDENEPLQAMMKDQ 982
Query: 199 FGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
F NYVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 983 FANYVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIVTRVEKLV 1031
>gi|242089229|ref|XP_002440447.1| hypothetical protein SORBIDRAFT_09g001090 [Sorghum bicolor]
gi|241945732|gb|EES18877.1| hypothetical protein SORBIDRAFT_09g001090 [Sorghum bicolor]
Length = 878
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 178/362 (49%), Gaps = 24/362 (6%)
Query: 84 FSHPCQEAEPINQDSSILNLLHNHNF-DGLRSNGNELSSVPRNQWMSSLSLKRNQWLQDS 142
+ P + PI S + + N F G+R+ GN S W S + K + L S
Sbjct: 471 LTSPVLPSSPIAPGSPLRHGERNMRFPSGMRNFGNSFGS-----WNSGMGGKMDANLMPS 525
Query: 143 F---------DCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE 193
L ++ G++V + DQYG R +Q+ + + EE +M+F E++ +
Sbjct: 526 LLEEFKSNKSKSYELSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALT 585
Query: 194 LMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNP 253
LM D FGNYVVQK E S Q + L +++ + L +G R + K +E +
Sbjct: 586 LMTDVFGNYVVQKFFEHGSTAQIKELAGQLIG---RVLALSLQMYGCRVIQKAIEVVDLD 642
Query: 254 QQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGC 313
Q +V A L + +D NG++VIQ C++ +++++ ++T GC
Sbjct: 643 LQTKMV-AELEGHVMRCVRDQNGNHVIQKCIECIPQHAIEFIVSTFYGQVVMLSTHPYGC 701
Query: 314 CVLQHCVEYSKGAQRERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLE 372
V+Q +E+ + ++++ EI+ + LLA+D YGNYVVQH+L P ++++ +L
Sbjct: 702 RVIQRVLEHCDDPKTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLI 761
Query: 373 GHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVS----MLLMHPFGNYVIQS 428
G V S K+ SNV+E+CL + +I E+L S + S +++ F NYV+Q
Sbjct: 762 GQIVQMSQQKFASNVIEKCLAFGNPVERQVLIGEMLGSTSESEPLEVMMKDQFANYVVQK 821
Query: 429 AL 430
L
Sbjct: 822 VL 823
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ ++ E +++ E++ E +M D F N
Sbjct: 757 IEKLIGQIVQMSQQKFASNVIEKCLAFGNPVERQVLIGEMLGSTSESEPLEVMMKDQFAN 816
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 817 YVVQKVLETCDDQQREMILTRIKTHLNTLKKYTYGKHIVARVEKLV 862
>gi|440638601|gb|ELR08520.1| hypothetical protein GMDG_03219 [Geomyces destructans 20631-21]
Length = 976
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 155/288 (53%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+++ G++V + DQ+G R +Q + + +E E IF E+ +LM D FGNYV+QKL
Sbjct: 545 LKNIYGHVVEFSGDQHGSRFIQMKLETANSDEKEQIFREIQPNALQLMTDVFGNYVIQKL 604
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + ++ N ++ + L +G R V K LE++ QQ LV L+
Sbjct: 605 FEHGNQIQKKILAEIMKN---HVIELSLQMYGCRVVQKALEHVLADQQAELVRE-LQADV 660
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ ++ E +++L+ + +AT GC V+Q +EY
Sbjct: 661 LKCVKDQNGNHVIQKAIERCPTEQVQFILDAFRTQVHTLATHPYGCRVIQRMLEYCTPPD 720
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ ++ E+ A A +L D YGNYVVQH++ P+ A L+ + ++ S +K+ SNV
Sbjct: 721 QTSVLKELFACAQMLIVDQYGNYVVQHVIQHGKPEDQAKLISMVTNQVLTLSKHKFASNV 780
Query: 388 VERCLLESGEEQSTRIIIELLR-----SPNVSMLLMHPFGNYVIQSAL 430
VER + EQ I+ +++ S + +++ +GNYVIQ L
Sbjct: 781 VERSISCGTTEQRQTIVAKIVALESDGSSPLQLMMKDQYGNYVIQKLL 828
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 110/217 (50%), Gaps = 15/217 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++ +++ L+ YGCR +Q+ + + ++ + E+ V + + D GN+V+QK +E
Sbjct: 620 MKNHVIELSLQMYGCRVVQKALEHVLADQQAELVRELQADVLKCVKDQNGNHVIQKAIER 679
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C EQ IL D F+ L TH G R + ++LE T P Q S VL L A
Sbjct: 680 CPTEQVQFIL-----DAFRTQVHTLATHPYGCRVIQRMLEYCTPPDQTS-VLKELFACAQ 733
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L D G+YV+Q+ ++H ED L++ V + ++ K V++ + QR
Sbjct: 734 MLIVDQYGNYVVQHVIQHGKPEDQAKLISMVTNQVLTLSKHKFASNVVERSISCGTTEQR 793
Query: 329 ERLVAEIIA-------NALLLAEDCYGNYVVQHLLAL 358
+ +VA+I+A L+ +D YGNYV+Q LL L
Sbjct: 794 QTIVAKIVALESDGSSPLQLMMKDQYGNYVIQKLLGL 830
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
+Y L + + + D+ G +Q +E + ++E++ EI NAL L D +GNYV+
Sbjct: 542 QYELKNIYGHVVEFSGDQHGSRFIQMKLETANSDEKEQIFREIQPNALQLMTDVFGNYVI 601
Query: 353 QHLLALRVPQITASLLRQ-LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSP 411
Q L QI +L + ++ H + S YG VV++ L +Q ++ EL
Sbjct: 602 QKLFE-HGNQIQKKILAEIMKNHVIELSLQMYGCRVVQKALEHVLADQQAELVREL--QA 658
Query: 412 NVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 659 DVLKCVKDQNGNHVIQKAI 677
>gi|242020205|ref|XP_002430546.1| pumilio, putative [Pediculus humanus corporis]
gi|212515710|gb|EEB17808.1| pumilio, putative [Pediculus humanus corporis]
Length = 588
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 167/304 (54%), Gaps = 10/304 (3%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R+++L+D + +LRDL +IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 238 RSRFLEDFRNNRYPSLTLRDLSRHIVEFSQDQHGSRFIQQKLERATVNEKQMVFNEILPS 297
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
LM D FGNYV+QK E + EQ+ IL + L + L +G R + K LE+L
Sbjct: 298 AYNLMTDVFGNYVIQKFFEFGTPEQKA-ILSQIVRGHVLL--LALQMYGCRVIQKALESL 354
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
T+ QQ +V L + KD NG++V+Q C++ ++++N ++ + ++T
Sbjct: 355 TSEQQQEIV-RELDGHVLKCVKDQNGNHVVQKCIERVDPHALQFIINALSGQVFALSTHP 413
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ ++A L +D +GNYV+QH+L P+ + ++
Sbjct: 414 YGCRVIQRILEHCTPEQVAPILEELHSHAEQLVQDQFGNYVIQHVLEHGKPEDKSKIINN 473
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHP--FGNYVIQS 428
+ G ++ S +K+ SNVVE+C+ + + + +I E+ + ++ LM + NYV+Q
Sbjct: 474 VRGKVLALSQHKFASNVVEKCVTHATRTERSVLIEEVCNYNDNALQLMMKDQYANYVVQK 533
Query: 429 ALLV 432
+ V
Sbjct: 534 MIDV 537
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 129/246 (52%), Gaps = 12/246 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + SL E+ + I E+ V + + D GN+VVQK +E
Sbjct: 330 VRGHVLLLALQMYGCRVIQKALESLTSEQQQEIVRELDGHVLKCVKDQNGNHVVQKCIER 389
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
I+ L+ F L+TH G R + ++LE+ T P+Q++ +L L A
Sbjct: 390 VDPHALQFIINALSGQVF-----ALSTHPYGCRVIQRILEHCT-PEQVAPILEELHSHAE 443
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED ++N V ++ K V++ CV ++ +R
Sbjct: 444 QLVQDQFGNYVIQHVLEHGKPEDKSKIINNVRGKVLALSQHKFASNVVEKCVTHATRTER 503
Query: 329 ERLVAEII---ANAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E+ NAL L+ +D Y NYVVQ ++ + P L+ ++ GH + YG
Sbjct: 504 SVLIEEVCNYNDNALQLMMKDQYANYVVQKMIDVCEPTQRKILMHKIRGHISALRKYTYG 563
Query: 385 SNVVER 390
+++ +
Sbjct: 564 KHIIAK 569
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI---DRVCELMI-DPFGNYV 203
+ ++RG ++AL++ ++ +++ ++ + E ++ EV D +LM+ D + NYV
Sbjct: 471 INNVRGKVLALSQHKFASNVVEKCVTHATRTERSVLIEEVCNYNDNALQLMMKDQYANYV 530
Query: 204 VQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL 263
VQK++++C QR +IL+ +R T+G + KL + L P + V + L
Sbjct: 531 VQKMIDVCEPTQR-KILMHKIRGHISALRKY--TYGKHIIAKLDKFLMKPPTLPSVGSEL 587
>gi|158828234|gb|ABW81111.1| putative pumilio Mpt5 [Boechera divaricarpa]
Length = 975
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 157/288 (54%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G++V + DQYG R +Q+ + + +E M++ E++ + LM D FGNYV+QK
Sbjct: 635 LSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFGNYVIQKF 694
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E QR + L ++ ++ + L +G R + K +E + Q+I +V L
Sbjct: 695 FEHGLPPQRRELADKLLDN---VLPLSLQMYGCRVIQKAIEVVDLDQKIKMV-KELDGHV 750
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++V+Q C++ E+ +++++ N ++T GC V+Q +E+
Sbjct: 751 MRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPD 810
Query: 328 RE-RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ +++ EI++ +LA+D YGNYV+QH+L P ++++L G V S K+ SN
Sbjct: 811 TQSKVMEEIMSTVSMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASN 870
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL G E+ ++ E+L + + + ++ F NYV+Q L
Sbjct: 871 VVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL 918
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
+LE + + L+ + V + D G IQ ++ + ++ + E+
Sbjct: 621 MLEEFKSNKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALA 680
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ QR L +++ N L L+ YG V+Q + +
Sbjct: 681 LMTDVFGNYVIQKFFEHGLPPQRRELADKLLDNVLPLSLQMYGCRVIQKAIEVVDLDQKI 740
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++++L+GH + ++ G++VV++C +E E++ II NV L HP+G V
Sbjct: 741 KMVKELDGHVMRCVRDQNGNHVVQKC-IECVPEENIEFIISTFFG-NVVTLSTHPYGCRV 798
Query: 426 IQSAL 430
IQ L
Sbjct: 799 IQRVL 803
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 15/122 (12%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L G IV +++ ++ +++ ++ EE E++ E++ E +M D F N
Sbjct: 852 IKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFAN 911
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKL---------LENLTN 252
YVVQK++E C ++QR IL + L + H + V KL L++LT
Sbjct: 912 YVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHIVARVEKLVAAGERRMALQSLTQ 971
Query: 253 PQ 254
PQ
Sbjct: 972 PQ 973
>gi|255566430|ref|XP_002524200.1| pumilio, putative [Ricinus communis]
gi|223536477|gb|EEF38124.1| pumilio, putative [Ricinus communis]
Length = 1011
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 163/307 (53%), Gaps = 13/307 (4%)
Query: 136 NQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELM 195
+++ + C L ++ G++V + DQYG R +Q+ + + EE M+F E++ + LM
Sbjct: 649 DEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFNEIMPQALSLM 708
Query: 196 IDPFGNYVVQK-------LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLE 248
D FGNYV+QK L + +I + ++ + L +G R + K +E
Sbjct: 709 TDVFGNYVIQKKNHLSIVLSSVFEHGSAAQIRELADQLIGHVLTLSLQMYGCRVIQKAIE 768
Query: 249 NLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIAT 308
+ QQ +V + L + +D NG++VIQ C++ + +++++ D ++T
Sbjct: 769 VVELDQQTKMV-SELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVSTFYDQVVTLST 827
Query: 309 DKSGCCVLQHCVEYSKGAQRERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASL 367
GC V+Q +E+ A+ +R++ EI+ + L+LA+D YGNYVVQH+L P +S+
Sbjct: 828 HPYGCRVIQRVLEHCHDAKTQRIMMDEILQSVLMLAQDQYGNYVVQHVLEHGKPHERSSI 887
Query: 368 LRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGN 423
+++L G V S K+ SNV+E+CL + ++ E+L + + + +++ F N
Sbjct: 888 IKKLTGQIVQMSQQKFASNVIEKCLTFGTAAERQALVNEMLGTTDENEPLQVMMKDQFAN 947
Query: 424 YVIQSAL 430
YV+Q L
Sbjct: 948 YVVQKVL 954
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 122/247 (49%), Gaps = 9/247 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G+++ L+ YGCR +Q+ + + ++ + E+ + + D GN+V+QK +E
Sbjct: 746 LIGHVLTLSLQMYGCRVIQKAIEVVELDQQTKMVSELDGHIMRCVRDQNGNHVIQKCIE- 804
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
C E + ++ D Q+V + + +G R + ++LE+ + + +++ + + L
Sbjct: 805 CVPEDAIQFIVSTFYD--QVVTLSTHPYGCRVIQRVLEHCHDAKTQRIMMDEILQSVLML 862
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YV+Q+ ++H + ++ ++ ++ K V++ C+ + A+R+
Sbjct: 863 AQDQYGNYVVQHVLEHGKPHERSSIIKKLTGQIVQMSQQKFASNVIEKCLTFGTAAERQA 922
Query: 331 LVAEIIANA------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
LV E++ ++ +D + NYVVQ +L Q +L +++ H + YG
Sbjct: 923 LVNEMLGTTDENEPLQVMMKDQFANYVVQKVLETCDDQQLELILDRIKVHLNALKKYTYG 982
Query: 385 SNVVERC 391
++V R
Sbjct: 983 KHIVARV 989
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDP 198
S ++ L G IV +++ ++ +++ ++ E + + E++ E +M D
Sbjct: 885 SSIIKKLTGQIVQMSQQKFASNVIEKCLTFGTAAERQALVNEMLGTTDENEPLQVMMKDQ 944
Query: 199 FGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
F NYVVQK++E C ++Q IL + L + H + V KL+
Sbjct: 945 FANYVVQKVLETCDDQQLELILDRIKVHLNALKKYTYGKHIVARVEKLV 993
>gi|294655796|ref|XP_457992.2| DEHA2C07128p [Debaryomyces hansenii CBS767]
gi|199430612|emb|CAG86050.2| DEHA2C07128p [Debaryomyces hansenii CBS767]
Length = 820
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 172/334 (51%), Gaps = 24/334 (7%)
Query: 114 SNGNELSSVPRNQWMSSLS---LKRNQWLQD---SFDCSS--LRDLRGNIVALAKDQYGC 165
SNGN+ PRN S + R+ L++ +F L+D+ G+ V KDQ+G
Sbjct: 433 SNGNKRKGNPRNASSSGKGTNHIYRSPLLEEIRSNFKGKEYFLKDIYGHAVEFTKDQHGS 492
Query: 166 RHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTN 225
R +Q+ + EE E+IF E+ D +LM D FGNYV+QK E S Q+ +L +
Sbjct: 493 RFIQQKLPESSDEEKEVIFNEIRDISYDLMTDVFGNYVIQKYFEHGSPIQKKILLDCMIG 552
Query: 226 DDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVK 285
++L L T G R V + LE + QI ++ L+ + KD NG++VIQ ++
Sbjct: 553 HIYEL---SLQTFGCRVVQRALEAIDLDGQIQII-EELKDYILVCAKDQNGNHVIQKSIE 608
Query: 286 HFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAED 345
+ +++L + + Y ++T GC V+Q +E+S R++++ E+ L +D
Sbjct: 609 TIPFDRIEFVLESLDNQIYHLSTHPYGCRVIQRLLEHSDAEDRKKILGELNRFIFYLIQD 668
Query: 346 CYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIII 405
YGNYV+QH L P+ +L+ + G V+FS +K+ SNV+E+C+ +Q RI+
Sbjct: 669 QYGNYVMQHTLERGNPEDREEILKIVLGSVVNFSKHKFASNVIEKCIKFGTLDQRRRILH 728
Query: 406 ELL------------RSPNVSMLLMHPFGNYVIQ 427
E++ +++++ + NYVIQ
Sbjct: 729 EVMIGNEDYNVETVSDDSALALMMKDQYANYVIQ 762
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 107/218 (49%), Gaps = 18/218 (8%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G+I L+ +GCR +QR + ++ + I E+ D + D GN+V+QK +E
Sbjct: 552 GHIYELSLQTFGCRVVQRALEAIDLDGQIQIIEELKDYILVCAKDQNGNHVIQKSIETIP 611
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
+ RI +L + D Q+ + + +G R + +LLE+ ++ + +L L L +
Sbjct: 612 FD---RIEFVLESLDNQIYHLSTHPYGCRVIQRLLEH-SDAEDRKKILGELNRFIFYLIQ 667
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D G+YV+Q+ ++ + ED + +L V + + K V++ C+++ QR R++
Sbjct: 668 DQYGNYVMQHTLERGNPEDREEILKIVLGSVVNFSKHKFASNVIEKCIKFGTLDQRRRIL 727
Query: 333 AEI-IANA-------------LLLAEDCYGNYVVQHLL 356
E+ I N L+ +D Y NYV+Q L+
Sbjct: 728 HEVMIGNEDYNVETVSDDSALALMMKDQYANYVIQKLV 765
>gi|259147977|emb|CAY81226.1| Puf3p [Saccharomyces cerevisiae EC1118]
Length = 893
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 165/306 (53%), Gaps = 25/306 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+ + KDQ+G R +QR +++ P E E+IF E+ D EL D FGNYV+QK
Sbjct: 550 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 609
Query: 208 VELCSEEQRTRILLMLTNDDFQ--LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
E S+ Q+ ++ D F+ + ++ L + R + K LE + + Q+I LVL L
Sbjct: 610 FEFGSKIQKNTLV-----DQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVL-ELSD 663
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
+ + KD NG++VIQ ++ +E ++L+ + + Y ++T GC V+Q +E+
Sbjct: 664 SVLQMIKDQNGNHVIQKAIETIPNEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSS 723
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLA------LRVPQITASLLRQLEGHYVSFS 379
+E ++ E+ L +D YGNYV+Q++L + I ++ + + V +S
Sbjct: 724 EDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANNVVEYS 783
Query: 380 CNKYGSNVVERCLLESGEEQSTRIIIELL-RSPNVS--------MLLM--HPFGNYVIQS 428
+K+ SNVVE+ +L ++Q II ++L R N + M+LM F NYVIQ
Sbjct: 784 KHKFASNVVEKSILYGSKDQKDSIISKILPRDKNHALNLEDDSPMILMIKDQFANYVIQK 843
Query: 429 ALLVSK 434
+ VS+
Sbjct: 844 LVNVSE 849
>gi|224106433|ref|XP_002314164.1| predicted protein [Populus trichocarpa]
gi|222850572|gb|EEE88119.1| predicted protein [Populus trichocarpa]
Length = 998
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 157/291 (53%), Gaps = 9/291 (3%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
C L ++ G++V + DQYG R +Q+ + + +E M++ E++ + LM D FGNYV+
Sbjct: 668 CLELSEIAGHVVEFSADQYGSRFIQQKLETATTDEKNMVYQEIMPQALALMTDVFGNYVI 727
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK E QR + L ++ + L +G R + K +E + +I +V L
Sbjct: 728 QKFFEHGLPSQRRELAGKLLG---HVLTLSLQMYGCRVIQKAIEVVDLEHKIKMV-EELD 783
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+ +D NG++VIQ C++ ++ ++++ D ++T GC V+Q +E+ K
Sbjct: 784 GHVMRCVRDQNGNHVIQKCIECIPEDNIQFIVTTFFDQVVILSTHPYGCRVIQRILEHCK 843
Query: 325 GAQRE-RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
A+ + +++ EI+ +LA+D YGNYVVQH+L ++++++L G V S K+
Sbjct: 844 DAKTQSKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKSHERSAIIKELAGRIVQMSQQKF 903
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
SNVVE+CL SG + ++ E+L + + + ++ F NYV+Q L
Sbjct: 904 ASNVVEKCLTFSGPSERQLLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL 954
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 121/247 (48%), Gaps = 9/247 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G+++ L+ YGCR +Q+ + + E + E+ V + D GN+V+QK +E
Sbjct: 746 LLGHVLTLSLQMYGCRVIQKAIEVVDLEHKIKMVEELDGHVMRCVRDQNGNHVIQKCIEC 805
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E+ I ++T Q+V + + +G R + ++LE+ + + S V+ + L
Sbjct: 806 IPED---NIQFIVTTFFDQVVILSTHPYGCRVIQRILEHCKDAKTQSKVMDEILGAVSML 862
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YV+Q+ ++H + ++ E+A ++ K V++ C+ +S ++R+
Sbjct: 863 AQDQYGNYVVQHVLEHGKSHERSAIIKELAGRIVQMSQQKFASNVVEKCLTFSGPSERQL 922
Query: 331 LVAEIIANA------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
LV E++ + +D + NYVVQ +L Q +L +++ H + YG
Sbjct: 923 LVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILTRIKVHLTALKKYTYG 982
Query: 385 SNVVERC 391
++V R
Sbjct: 983 KHIVARV 989
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 87/185 (47%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE + + L L+ + V + D G IQ ++ + ++ + E+
Sbjct: 657 LLEEFKSNKTKCLELSEIAGHVVEFSADQYGSRFIQQKLETATTDEKNMVYQEIMPQALA 716
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ +QR L +++ + L L+ YG V+Q + + +
Sbjct: 717 LMTDVFGNYVIQKFFEHGLPSQRRELAGKLLGHVLTLSLQMYGCRVIQKAIEVVDLEHKI 776
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++ +L+GH + ++ G++V+++C +E E + + I+ V +L HP+G V
Sbjct: 777 KMVEELDGHVMRCVRDQNGNHVIQKC-IECIPEDNIQFIVTTFFD-QVVILSTHPYGCRV 834
Query: 426 IQSAL 430
IQ L
Sbjct: 835 IQRIL 839
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L G IV +++ ++ +++ ++ E +++ E++ E +M D F N
Sbjct: 888 IKELAGRIVQMSQQKFASNVVEKCLTFSGPSERQLLVNEMLGTTDENEPLQAMMKDQFAN 947
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 948 YVVQKVLETCDDQQRELILTRIKVHLTALKKYTYGKHIVARVEKLV 993
>gi|115442517|ref|NP_001045538.1| Os01g0971900 [Oryza sativa Japonica Group]
gi|57899216|dbj|BAD87365.1| putative pumilio domain-containing protein PPD1 [Oryza sativa
Japonica Group]
gi|113535069|dbj|BAF07452.1| Os01g0971900 [Oryza sativa Japonica Group]
gi|218189826|gb|EEC72253.1| hypothetical protein OsI_05392 [Oryza sativa Indica Group]
gi|222619956|gb|EEE56088.1| hypothetical protein OsJ_04928 [Oryza sativa Japonica Group]
Length = 894
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 154/288 (53%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G++V + DQYG R +Q+ + + EE +M+F E++ + LM D FGNYVVQK
Sbjct: 557 LSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFAEIMPQALTLMTDVFGNYVVQKF 616
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S Q + L +++ + L +G R + K +E + QQ +V A L
Sbjct: 617 FEHGSSAQIKELADQLIG---RVLALSLQMYGCRVIQKAIEVVDLDQQTKMV-AELDGQV 672
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ C++ +++++ ++T GC V+Q +E+ +
Sbjct: 673 MRCVRDQNGNHVIQKCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPK 732
Query: 328 RERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
++++ EI+ + LLA D YGNYVVQH+L P ++++ +L G V S K+ SN
Sbjct: 733 TQQIMMDEILQSVCLLATDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASN 792
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVS----MLLMHPFGNYVIQSAL 430
V+E+CL + +I E+L S N S +++ F NYV+Q L
Sbjct: 793 VIEKCLAFGNPVERQVLIGEMLGSSNESEHLEVMMKDQFANYVVQKVL 840
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 2/188 (1%)
Query: 243 VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADN 302
V LLE + + S L+ + V + D G IQ ++ S E+ + E+
Sbjct: 540 VPSLLEEFKSNKSKSYELSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFAEIMPQ 599
Query: 303 CYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ 362
+ TD G V+Q E+ AQ + L ++I L L+ YG V+Q + +
Sbjct: 600 ALTLMTDVFGNYVVQKFFEHGSSAQIKELADQLIGRVLALSLQMYGCRVIQKAIEVVDLD 659
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFG 422
++ +L+G + ++ G++V+++C +E + + + I+ V ML HP+G
Sbjct: 660 QQTKMVAELDGQVMRCVRDQNGNHVIQKC-IECIPQHAIQFIVSTFYG-QVVMLSTHPYG 717
Query: 423 NYVIQSAL 430
VIQ L
Sbjct: 718 CRVIQRVL 725
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ ++ E +++ E++ E +M D F N
Sbjct: 774 IEKLIGQIVQMSQQKFASNVIEKCLAFGNPVERQVLIGEMLGSSNESEHLEVMMKDQFAN 833
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 834 YVVQKVLETCDDQQREMILTRIKAHLNTLKKYTYGKHIVARVEKLV 879
>gi|158578543|gb|ABW74568.1| Mpt5 [Boechera divaricarpa]
Length = 970
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 156/288 (54%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G++V + DQYG R +Q+ + + +E M++ E++ + LM D FGNYV+QK
Sbjct: 630 LSEIAGHVVEFSSDQYGSRFIQQKLETATADEKNMVYEEIMPQALALMTDVFGNYVIQKF 689
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E QR + L ++ ++ + L +G R + K +E + Q+I +V L
Sbjct: 690 FEHGLPPQRRELAEKLIDN---VLPLSLQMYGCRVIQKAIEVVDLDQKIKMV-KELDGHV 745
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++V+Q C++ ++ +++++ + ++T GC V+Q +E+
Sbjct: 746 MRCVRDQNGNHVVQKCIECVPEDNIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPD 805
Query: 328 RERLV-AEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+R V EI++ +LA+D YGNYVVQH+L P ++++L G V S K+ SN
Sbjct: 806 TQRKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASN 865
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL G E+ ++ E+L + + + ++ F NYV+Q L
Sbjct: 866 VVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL 913
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
+LE + + L+ + V + D G IQ ++ + ++ + E+
Sbjct: 616 MLEEFKSNKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATADEKNMVYEEIMPQALA 675
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ QR L ++I N L L+ YG V+Q + +
Sbjct: 676 LMTDVFGNYVIQKFFEHGLPPQRRELAEKLIDNVLPLSLQMYGCRVIQKAIEVVDLDQKI 735
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++++L+GH + ++ G++VV++C +E E + II +V L HP+G V
Sbjct: 736 KMVKELDGHVMRCVRDQNGNHVVQKC-IECVPEDNIEFIISTFFG-HVVTLSTHPYGCRV 793
Query: 426 IQSAL 430
IQ L
Sbjct: 794 IQRVL 798
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 15/122 (12%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L G IV +++ ++ +++ ++ EE E++ E++ E +M D F N
Sbjct: 847 IKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFAN 906
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKL---------LENLTN 252
YVVQK++E C ++QR IL + L + H + V KL L++LT
Sbjct: 907 YVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHIVARVEKLVAAGERRMALQSLTR 966
Query: 253 PQ 254
PQ
Sbjct: 967 PQ 968
>gi|328767389|gb|EGF77439.1| hypothetical protein BATDEDRAFT_91666 [Batrachochytrium
dendrobatidis JAM81]
Length = 869
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 156/291 (53%), Gaps = 9/291 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G+IV + DQ+G R +Q+ + + +E +++F E++ +LM D FGNYV+QK+
Sbjct: 541 LGDIVGSIVEFSGDQHGSRFIQQKLETCTNDEKQLVFDEIMPNALQLMTDVFGNYVIQKI 600
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S Q+ +IL L + ++ + L +G R V K E++ QQ L+ L
Sbjct: 601 FEYGSAAQK-QILAELM--EGSVLELSLQMYGCRVVQKAFEHVPIEQQARLI-HELDGNV 656
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ ++ S E K++++ Y +AT GC V+Q E+ +
Sbjct: 657 LKCVKDQNGNHVIQKAIERVSAEHIKFIIDAFHGQVYALATHPYGCRVIQRIFEHCSEEE 716
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ L+ E+ A+ L +D YGNYV+QH+L P ++ +++G ++ S +K+ SNV
Sbjct: 717 TQPLLGELHRYAISLIQDQYGNYVIQHILERGRPSDKLFVINKVKGQILTMSKHKFASNV 776
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSML---LMHPFGNYVIQSALLVS 433
VE+C+ II E+ +S + L + F NYV+Q L V+
Sbjct: 777 VEKCVAFGSPADRQDIIDEVATTKSDGTTALFTMMKDQFANYVVQKMLDVA 827
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 119/248 (47%), Gaps = 11/248 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+ G+++ L+ YGCR +Q+ +P E+ + E+ V + + D GN+V+QK +E
Sbjct: 616 MEGSVLELSLQMYGCRVVQKAFEHVPIEQQARLIHELDGNVLKCVKDQNGNHVIQKAIER 675
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
S E I ++ Q+ + + +G R + ++ E+ + ++ +L L A++L
Sbjct: 676 VSAEH---IKFIIDAFHGQVYALATHPYGCRVIQRIFEHCSE-EETQPLLGELHRYAISL 731
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YVIQ+ ++ D +++N+V ++ K V++ CV + A R+
Sbjct: 732 IQDQYGNYVIQHILERGRPSDKLFVINKVKGQILTMSKHKFASNVVEKCVAFGSPADRQD 791
Query: 331 LVAEIIANA-------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
++ E+ + +D + NYVVQ +L + L+ +++ S Y
Sbjct: 792 IIDEVATTKSDGTTALFTMMKDQFANYVVQKMLDVASEPQKVMLVTKIKPQLPSLKKFTY 851
Query: 384 GSNVVERC 391
G +++ +
Sbjct: 852 GKHLISKV 859
>gi|383848137|ref|XP_003699708.1| PREDICTED: pumilio homolog 2-like [Megachile rotundata]
Length = 1241
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 163/306 (53%), Gaps = 10/306 (3%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL +IV ++DQ+G R +Q+ + E +++F E++
Sbjct: 859 RSRLLEDFRNNRFPSLQLRDLTNHIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTS 918
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
LM D FGNYV+QK E + EQ++ + + ++ + L +G R + K LE++
Sbjct: 919 AYSLMTDVFGNYVIQKFFEFGTPEQKSTLAQKVRG---HVLPLALQMYGCRVIQKALESI 975
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
P+Q ++ L + KD NG++V+Q C++ ++++ A Y ++T
Sbjct: 976 -GPEQQQEIVRELDGHVLKCVKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHP 1034
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q + ++ E+ A L +D YGNYV+QH+L P+ L+
Sbjct: 1035 YGCRVIQRILEHCTPEQTQGILQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKTQLISS 1094
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQS 428
+ G ++ S +K+ SNVVE+C+ + ++ +I E+ +++++ + NYV+Q
Sbjct: 1095 VRGKVLTLSQHKFASNVVEKCVTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQK 1154
Query: 429 ALLVSK 434
+ V++
Sbjct: 1155 MIDVAE 1160
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 127/244 (52%), Gaps = 8/244 (3%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ +RG+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +
Sbjct: 949 QKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVRELDGHVLKCVKDQNGNHVVQKCI 1008
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
E C E + + ++ Q+ + + +G R + ++LE+ T P+Q +L L
Sbjct: 1009 E-CVEPRALQFVIGAFAG--QVYSLSTHPYGCRVIQRILEHCT-PEQTQGILQELHAATD 1064
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED L++ V ++ K V++ CV ++ +R
Sbjct: 1065 QLIQDQYGNYVIQHVLEHGKPEDKTQLISSVRGKVLTLSQHKFASNVVEKCVTHATRQER 1124
Query: 329 ERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H S YG
Sbjct: 1125 AVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKVLMHKIRPHLGSLRKYTYG 1184
Query: 385 SNVV 388
+++
Sbjct: 1185 KHII 1188
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 62/140 (44%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L++L L +DQYG +Q + E+ + V +V L F + VV+K
Sbjct: 1056 LQELHAATDQLIQDQYGNYVIQHVLEHGKPEDKTQLISSVRGKVLTLSQHKFASNVVEKC 1115
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + ++R ++ + + + + + V++ + ++ P Q +++ +RP
Sbjct: 1116 VTHATRQERAVLIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKVLMHKIRPHL 1175
Query: 268 VTLTKDTNGHYVIQYCVKHF 287
+L K T G ++I K F
Sbjct: 1176 GSLRKYTYGKHIIVKLEKFF 1195
>gi|52353575|gb|AAU44141.1| putative pumilio/Mpt5 family RNA-binding protein [Oryza sativa
Japonica Group]
Length = 874
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 176/368 (47%), Gaps = 28/368 (7%)
Query: 77 PLVENGFFSHPCQEAEPINQDSSILNLLHNHNFDGLRSNGNELSSVPRNQWMSSLSLKRN 136
PL+ S P P+ + + G+R+ G S W L K N
Sbjct: 297 PLMSPVLPSSPAAPGSPLRHGERSMRMQ-----SGIRNFGGSFGS-----WNPDLGGKMN 346
Query: 137 ---------QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEV 187
++ + L ++ G++V + DQYG R +Q+ + + EE +M+F E+
Sbjct: 347 INMMPSLLEEFKSNKSKSYELSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEI 406
Query: 188 IDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
+ + LM D FGNYVVQK E S Q + L +++ + L +G R + K +
Sbjct: 407 MPQALTLMTDVFGNYVVQKFFEHGSPTQIKELADQLIG---RVLALSLQMYGCRVIQKAI 463
Query: 248 ENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIA 307
E + QQ +V A L + +D NG++VIQ C++ +++++ ++
Sbjct: 464 EVVGLDQQTKMV-AELDGHVMRCVRDQNGNHVIQKCIECIPQHAIQFIVSTFYGQVVMLS 522
Query: 308 TDKSGCCVLQHCVEYSKGAQRERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITAS 366
T GC V+Q +E+ ++++ EI+ + LLA+D YGNYVVQH+L P ++
Sbjct: 523 THPYGCRVIQRVLEHCDDPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSA 582
Query: 367 LLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVS----MLLMHPFG 422
++ +L G V S K+ SNV+E+CL + +I E+L S N S +++ F
Sbjct: 583 IIEKLIGQIVQMSQQKFASNVIEKCLAFGNPVERQILISEMLGSTNESEHLEVMMKDQFA 642
Query: 423 NYVIQSAL 430
NYV+Q L
Sbjct: 643 NYVVQKVL 650
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ ++ E +++ E++ E +M D F N
Sbjct: 584 IEKLIGQIVQMSQQKFASNVIEKCLAFGNPVERQILISEMLGSTNESEHLEVMMKDQFAN 643
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 644 YVVQKVLETCDDQQREAILTRIKAHLNTLKKYTYGKHIVARVEKLV 689
>gi|20160612|dbj|BAB89558.1| putative pumilio domain-containing protein PPD1 [Oryza sativa
Japonica Group]
gi|125572616|gb|EAZ14131.1| hypothetical protein OsJ_04054 [Oryza sativa Japonica Group]
Length = 1048
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 159/311 (51%), Gaps = 22/311 (7%)
Query: 138 WLQDSFDCSSLRDLRGN-------------IVALAKDQYGCRHLQRTMSSLPKEEIEMIF 184
++ D+F S L + + N +V + DQYG R +Q+ + + EE +M+F
Sbjct: 688 YMNDNFPSSLLDEFKSNKARSFELAEIASHVVEFSADQYGSRFIQQKLETATVEEKDMVF 747
Query: 185 VEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVL 244
E++ + LM D FGNYVVQK E S QR + L ++ + L +G R +
Sbjct: 748 KEIMPQALSLMTDVFGNYVVQKFFEHGSAAQRRELADQLFG---HVLALSLQMYGCRVIQ 804
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
K +E + Q+ +V L + +D NG++VIQ C++ + +++++
Sbjct: 805 KAIEVVDLDQKTKMV-TELDGHIMRCVRDQNGNHVIQKCIECVPEDSIQFIISTFYGQVV 863
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQI 363
++T GC V+Q +E+ + + +V EI+ + +LA+D YGNYVVQH+L P
Sbjct: 864 PLSTHPYGCRVIQRVLEHCTDPKTQEIVMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHE 923
Query: 364 TASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMH 419
+ ++ +L G + S K+ SNVVE+CL G + +I E+L + + + ++
Sbjct: 924 RSVIIEKLAGQIIQMSQQKFASNVVEKCLTFGGPAEREVLINEMLGTTDENEPLQAMMKD 983
Query: 420 PFGNYVIQSAL 430
FGNYV+Q L
Sbjct: 984 QFGNYVVQKVL 994
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G I+ +++ ++ +++ ++ E E++ E++ E +M D FGN
Sbjct: 928 IEKLAGQIIQMSQQKFASNVVEKCLTFGGPAEREVLINEMLGTTDENEPLQAMMKDQFGN 987
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 988 YVVQKVLETCDDQQRELILSRVKVHLSALKKYTYGKHIVARVEKLV 1033
>gi|115457242|ref|NP_001052221.1| Os04g0201200 [Oryza sativa Japonica Group]
gi|38345179|emb|CAE03335.2| OSJNBb0005B05.2 [Oryza sativa Japonica Group]
gi|113563792|dbj|BAF14135.1| Os04g0201200 [Oryza sativa Japonica Group]
Length = 795
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 153/280 (54%), Gaps = 6/280 (2%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G+++ ++ DQ+G R +Q+ + ++ E IF E++ L D FGNYV+QK E +
Sbjct: 451 GHVMEVSMDQFGSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFAT 510
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
E Q +++ L +++ +G R V K+++ + ++IS+V L+ +
Sbjct: 511 ESQLSQLADQLRG---HFLQLSFQMYGCRVVQKVIDVVDLERKISIV-GELKNSVLRCIS 566
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG-AQRERL 331
D NG++VIQ C++ + +++ ++ Y + T + GC V+Q +E+ A + +
Sbjct: 567 DQNGNHVIQKCIECVPEDHIPFVIEDILQKIYPLCTHQYGCRVIQRVLEHCHNPATQSAV 626
Query: 332 VAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERC 391
+ EI+ A L ED +GNYVVQH+L P+ +S++++L G V+ S KY SNVVE+C
Sbjct: 627 MDEIVERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEKC 686
Query: 392 LLESGEEQSTRIIIELLRSPNVSMLLMHP-FGNYVIQSAL 430
L ++ +I E++ S LM FGNYV+Q L
Sbjct: 687 LSFGTPDEREGLIREIVSSGQTFQGLMKDQFGNYVVQRIL 726
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 129/252 (51%), Gaps = 8/252 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
LRG+ + L+ YGCR +Q+ + + E I E+ + V + D GN+V+QK +E
Sbjct: 521 LRGHFLQLSFQMYGCRVVQKVIDVVDLERKISIVGELKNSVLRCISDQNGNHVIQKCIEC 580
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E+ I ++ + ++ +C + +G R + ++LE+ NP S V+ + A L
Sbjct: 581 VPEDH---IPFVIEDILQKIYPLCTHQYGCRVIQRVLEHCHNPATQSAVMDEIVERAFDL 637
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
T+D G+YV+Q+ ++H E+ ++ +++ ++ K V++ C+ + +RE
Sbjct: 638 TEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEKCLSFGTPDEREG 697
Query: 331 LVAEIIANALL---LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
L+ EI+++ L +D +GNYVVQ +L + +L ++ H +G ++
Sbjct: 698 LIREIVSSGQTFQGLMKDQFGNYVVQRILQTCDDKFLVVILSSIKMHLNELKNYTFGKHI 757
Query: 388 VERC--LLESGE 397
V R L+ +GE
Sbjct: 758 VARVEKLIITGE 769
>gi|115441005|ref|NP_001044782.1| Os01g0844800 [Oryza sativa Japonica Group]
gi|113534313|dbj|BAF06696.1| Os01g0844800 [Oryza sativa Japonica Group]
gi|215704672|dbj|BAG94300.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1060
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 159/311 (51%), Gaps = 22/311 (7%)
Query: 138 WLQDSFDCSSLRDLRGN-------------IVALAKDQYGCRHLQRTMSSLPKEEIEMIF 184
++ D+F S L + + N +V + DQYG R +Q+ + + EE +M+F
Sbjct: 700 YMNDNFPSSLLDEFKSNKARSFELAEIASHVVEFSADQYGSRFIQQKLETATVEEKDMVF 759
Query: 185 VEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVL 244
E++ + LM D FGNYVVQK E S QR + L ++ + L +G R +
Sbjct: 760 KEIMPQALSLMTDVFGNYVVQKFFEHGSAAQRRELADQLFG---HVLALSLQMYGCRVIQ 816
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
K +E + Q+ +V L + +D NG++VIQ C++ + +++++
Sbjct: 817 KAIEVVDLDQKTKMV-TELDGHIMRCVRDQNGNHVIQKCIECVPEDSIQFIISTFYGQVV 875
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQI 363
++T GC V+Q +E+ + + +V EI+ + +LA+D YGNYVVQH+L P
Sbjct: 876 PLSTHPYGCRVIQRVLEHCTDPKTQEIVMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHE 935
Query: 364 TASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMH 419
+ ++ +L G + S K+ SNVVE+CL G + +I E+L + + + ++
Sbjct: 936 RSVIIEKLAGQIIQMSQQKFASNVVEKCLTFGGPAEREVLINEMLGTTDENEPLQAMMKD 995
Query: 420 PFGNYVIQSAL 430
FGNYV+Q L
Sbjct: 996 QFGNYVVQKVL 1006
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G I+ +++ ++ +++ ++ E E++ E++ E +M D FGN
Sbjct: 940 IEKLAGQIIQMSQQKFASNVVEKCLTFGGPAEREVLINEMLGTTDENEPLQAMMKDQFGN 999
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 1000 YVVQKVLETCDDQQRELILSRVKVHLSALKKYTYGKHIVARVEKLV 1045
>gi|90265098|emb|CAH67711.1| H0512B01.6 [Oryza sativa Indica Group]
Length = 795
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 153/280 (54%), Gaps = 6/280 (2%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G+++ ++ DQ+G R +Q+ + ++ E IF E++ L D FGNYV+QK E +
Sbjct: 451 GHVMEVSMDQFGSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFAT 510
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
E Q +++ L +++ +G R V K+++ + ++IS+V L+ +
Sbjct: 511 ESQLSQLADQLRG---HFLQLSFQMYGCRVVQKVIDVVDLERKISIV-GELKNSVLRCIS 566
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG-AQRERL 331
D NG++VIQ C++ + +++ ++ Y + T + GC V+Q +E+ A + +
Sbjct: 567 DQNGNHVIQKCIECVPEDHIPFVIEDILQKIYPLCTHQYGCRVIQRVLEHCHNPATQSAV 626
Query: 332 VAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERC 391
+ EI+ A L ED +GNYVVQH+L P+ +S++++L G V+ S KY SNVVE+C
Sbjct: 627 MDEIVERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEKC 686
Query: 392 LLESGEEQSTRIIIELLRSPNVSMLLMHP-FGNYVIQSAL 430
L ++ +I E++ S LM FGNYV+Q L
Sbjct: 687 LSFGTPDEREGLIREIVSSGQTFQGLMKDQFGNYVVQRIL 726
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 129/252 (51%), Gaps = 8/252 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
LRG+ + L+ YGCR +Q+ + + E I E+ + V + D GN+V+QK +E
Sbjct: 521 LRGHFLQLSFQMYGCRVVQKVIDVVDLERKISIVGELKNSVLRCISDQNGNHVIQKCIEC 580
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E+ I ++ + ++ +C + +G R + ++LE+ NP S V+ + A L
Sbjct: 581 VPEDH---IPFVIEDILQKIYPLCTHQYGCRVIQRVLEHCHNPATQSAVMDEIVERAFDL 637
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
T+D G+YV+Q+ ++H E+ ++ +++ ++ K V++ C+ + +RE
Sbjct: 638 TEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEKCLSFGTPDEREG 697
Query: 331 LVAEIIANALL---LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
L+ EI+++ L +D +GNYVVQ +L + +L ++ H +G ++
Sbjct: 698 LIREIVSSGQTFQGLMKDQFGNYVVQRILQTCDDKFLVVILSSIKMHLNELKNYTFGKHI 757
Query: 388 VERC--LLESGE 397
V R L+ +GE
Sbjct: 758 VARVEKLIITGE 769
>gi|387594744|gb|EIJ89768.1| hypothetical protein NEQG_00538 [Nematocida parisii ERTm3]
gi|387596408|gb|EIJ94029.1| hypothetical protein NEPG_00694 [Nematocida parisii ERTm1]
Length = 461
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 181/337 (53%), Gaps = 27/337 (8%)
Query: 111 GLRSNGNE---LSSVPRNQWMSSLSL--KRNQWLQDSFDCSSLRDLRGN---IVALAKDQ 162
GL+ G L+S+ + + S S ++ Q+ ++ + R + + I A++KDQ
Sbjct: 96 GLKEKGKRHILLNSIKIDSFSSGSSEEPQKEQFFEEVLAFAKKRGITSSENLICAISKDQ 155
Query: 163 YGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLM 222
G R +Q+ + S EEI++ F E+ + EL++D FGNYVVQK +E+ + EQR +I
Sbjct: 156 EGSRFIQKKLDSATIEEIDITFEEICPWISELIVDLFGNYVVQKFLEIGTTEQREKIFFA 215
Query: 223 LTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQY 282
+ + ++ + L+ +G R + K LE ++I + ++ + L D NG++V+Q
Sbjct: 216 MES---TIISLALHMYGCRVIQKALECKDINRKI---VEKIKGHVIDLVCDQNGNHVVQK 269
Query: 283 CVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLL 342
CV+ D+ +++ E ++ ++ + GC V+Q E S + +II+NA LL
Sbjct: 270 CVECV---DSDFVIKEFEEDAVSLSRHRYGCRVIQRIFENSTKCA--SAIDKIISNAKLL 324
Query: 343 AEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTR 402
ED YGNYV+QH+L ++ +L + +S +K+ SNV+E+C++ G + R
Sbjct: 325 VEDQYGNYVIQHILEKGTHAHKRKIITELSDNIAEYSIHKFASNVMEKCVI-CGTSEDRR 383
Query: 403 IIIELLRS---PNVSMLLMH----PFGNYVIQSALLV 432
+++ L+S P LL+H FGNYV+Q L V
Sbjct: 384 YMLKQLKSAVGPAGEDLLVHITMDKFGNYVVQRLLDV 420
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 24/259 (9%)
Query: 151 LRGNIVALAKDQYGCRHLQRTM--SSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ I++LA YGCR +Q+ + + ++ +E I VID VC D GN+VVQK V
Sbjct: 216 MESTIISLALHMYGCRVIQKALECKDINRKIVEKIKGHVIDLVC----DQNGNHVVQKCV 271
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
E + ++ D L R + +G R + ++ EN T + + + + A
Sbjct: 272 ECVDSD---FVIKEFEEDAVSLSR---HRYGCRVIQRIFENST---KCASAIDKIISNAK 322
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++ +H + ++ E++DN + K V++ CV R
Sbjct: 323 LLVEDQYGNYVIQHILEKGTHAHKRKIITELSDNIAEYSIHKFASNVMEKCVICGTSEDR 382
Query: 329 ERLVAEIIANALLLAEDC--------YGNYVVQHLLALRVPQITASLLRQLEGHYVSFSC 380
++ ++ + ED +GNYVVQ LL + L+ L +
Sbjct: 383 RYMLKQLKSAVGPAGEDLLVHITMDKFGNYVVQRLLDVLTGADKEVLMSHLRANIADLKK 442
Query: 381 NKYGSNVVER-CLLESGEE 398
+ Y ++ + LL+S +E
Sbjct: 443 SSYAKCIISKLALLDSKKE 461
>gi|226287941|gb|EEH43454.1| pumilio domain-containing protein [Paracoccidioides brasiliensis
Pb18]
Length = 925
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 142/288 (49%), Gaps = 41/288 (14%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F + L +G + ++ KDQYGCR+LQ+ + ++MIF+E V ELM DPFGNY
Sbjct: 512 FGNAPLETYQGELYSMCKDQYGCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNY 571
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
+ QKL+E ++EQRT ++ N QLV+I LN HG RA+ K++E ++ P+Q + A
Sbjct: 572 LCQKLLEYSNDEQRT---ALINNAAPQLVKIALNQHGTRALQKMIEFISTPEQ--FIYDA 626
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
+ V + +G V+Q C+ H S + L+ ++ N + + D
Sbjct: 627 VGASCVPVGTHRHGCCVLQRCIDHASGDQRARLIEQITKNAFTLVQDP------------ 674
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+GNYVVQ++L L + R G+ + S K
Sbjct: 675 ------------------------FGNYVVQYILDLNERHFIEPICRSFRGNIPALSKQK 710
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ SNV+E+C+ + + +I E+L + +L F NYV+Q+A+
Sbjct: 711 FSSNVIEKCIRTADNQCRAALIEEMLVPSELEKMLRDSFANYVVQTAM 758
>gi|222629930|gb|EEE62062.1| hypothetical protein OsJ_16846 [Oryza sativa Japonica Group]
Length = 878
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 167/334 (50%), Gaps = 23/334 (6%)
Query: 111 GLRSNGNELSSVPRNQWMSSLSLKRN---------QWLQDSFDCSSLRDLRGNIVALAKD 161
G+R+ G S W L K N ++ + L ++ G++V + D
Sbjct: 498 GIRNFGGSFGS-----WNPDLGGKMNINMMPSLLEEFKSNKSKSYELSEIAGHVVEFSAD 552
Query: 162 QYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILL 221
QYG R +Q+ + + EE +M+F E++ + LM D FGNYVVQK E S Q +
Sbjct: 553 QYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSPTQIKELAD 612
Query: 222 MLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQ 281
L +++ + L +G R + K +E + QQ +V A L + +D NG++VIQ
Sbjct: 613 QLIG---RVLALSLQMYGCRVIQKAIEVVGLDQQTKMV-AELDGHVMRCVRDQNGNHVIQ 668
Query: 282 YCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVA-EIIANAL 340
C++ +++++ ++T GC V+Q +E+ ++++ EI+ +
Sbjct: 669 KCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPTTQQIMMDEILQSVC 728
Query: 341 LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQS 400
LLA+D YGNYVVQH+L P ++++ +L G V S K+ SNV+E+CL +
Sbjct: 729 LLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLAFGNPVER 788
Query: 401 TRIIIELLRSPNVS----MLLMHPFGNYVIQSAL 430
+I E+L S N S +++ F NYV+Q L
Sbjct: 789 QILISEMLGSTNESEHLEVMMKDQFANYVVQKVL 822
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ ++ E +++ E++ E +M D F N
Sbjct: 756 IEKLIGQIVQMSQQKFASNVIEKCLAFGNPVERQILISEMLGSTNESEHLEVMMKDQFAN 815
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 816 YVVQKVLETCDDQQREAILTRIKAHLNTLKKYTYGKHIVARVEKLV 861
>gi|215768674|dbj|BAH00903.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 167/334 (50%), Gaps = 23/334 (6%)
Query: 111 GLRSNGNELSSVPRNQWMSSLSLKRN---------QWLQDSFDCSSLRDLRGNIVALAKD 161
G+R+ G S W L K N ++ + L ++ G++V + D
Sbjct: 502 GIRNFGGSFGS-----WNPDLGGKMNINMMPSLLEEFKSNKSKSYELSEIAGHVVEFSAD 556
Query: 162 QYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILL 221
QYG R +Q+ + + EE +M+F E++ + LM D FGNYVVQK E S Q +
Sbjct: 557 QYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSPTQIKELAD 616
Query: 222 MLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQ 281
L +++ + L +G R + K +E + QQ +V A L + +D NG++VIQ
Sbjct: 617 QLIG---RVLALSLQMYGCRVIQKAIEVVGLDQQTKMV-AELDGHVMRCVRDQNGNHVIQ 672
Query: 282 YCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVA-EIIANAL 340
C++ +++++ ++T GC V+Q +E+ ++++ EI+ +
Sbjct: 673 KCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPTTQQIMMDEILQSVC 732
Query: 341 LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQS 400
LLA+D YGNYVVQH+L P ++++ +L G V S K+ SNV+E+CL +
Sbjct: 733 LLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLAFGNPVER 792
Query: 401 TRIIIELLRSPNVS----MLLMHPFGNYVIQSAL 430
+I E+L S N S +++ F NYV+Q L
Sbjct: 793 QILISEMLGSTNESEHLEVMMKDQFANYVVQKVL 826
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ ++ E +++ E++ E +M D F N
Sbjct: 760 IEKLIGQIVQMSQQKFASNVIEKCLAFGNPVERQILISEMLGSTNESEHLEVMMKDQFAN 819
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 820 YVVQKVLETCDDQQREAILTRIKAHLNTLKKYTYGKHIVARVEKLV 865
>gi|430811325|emb|CCJ31248.1| unnamed protein product [Pneumocystis jirovecii]
Length = 995
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 121/193 (62%), Gaps = 2/193 (1%)
Query: 238 HGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLN 297
HG RAV K++E L+ P+QI +V+ AL VTL KD NG++VIQ C+ S++D +++ +
Sbjct: 2 HGTRAVQKMIEYLSTPEQIKIVINALNSSVVTLIKDLNGNHVIQKCLNKLSNDDIQFIFD 61
Query: 298 EVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLA 357
+ NC +AT + GCCVLQ C++++ +Q+ ++ EI +AL L +D +GNYVVQ++L
Sbjct: 62 AICSNCIEVATHRHGCCVLQRCIDHASDSQKVQIAKEITNHALNLVQDPFGNYVVQYILD 121
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLL 417
L + + L+ + G+ S K+ SNV+E+C+ + + +I EL + + L+
Sbjct: 122 LGDARFSEPLIHRFIGNICLLSVQKFSSNVIEKCIRMAEPPTRSLLIEELPKK--IGSLI 179
Query: 418 MHPFGNYVIQSAL 430
+ NYVIQ++L
Sbjct: 180 RDSYANYVIQTSL 192
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 163 YGCRHLQRTMSSLPK-EEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILL 221
+G R +Q+ + L E+I+++ + V L+ D GN+V+QK C L
Sbjct: 2 HGTRAVQKMIEYLSTPEQIKIVINALNSSVVTLIKDLNGNHVIQK----C--------LN 49
Query: 222 MLTNDDFQLV--RICLN-------THGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
L+NDD Q + IC N HG + + +++ ++ Q++ + + A+ L +
Sbjct: 50 KLSNDDIQFIFDAICSNCIEVATHRHGCCVLQRCIDHASDSQKVQIA-KEITNHALNLVQ 108
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D G+YV+QY + ++ L++ N ++ K V++ C+ ++ R L+
Sbjct: 109 DPFGNYVVQYILDLGDARFSEPLIHRFIGNICLLSVQKFSSNVIEKCIRMAEPPTRSLLI 168
Query: 333 AEIIANALLLAEDCYGNYVVQHLL 356
E+ L D Y NYV+Q L
Sbjct: 169 EELPKKIGSLIRDSYANYVIQTSL 192
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 81/184 (44%), Gaps = 4/184 (2%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L ++V L KD G +Q+ ++ L ++I+ IF + E+ G V+Q+ ++
Sbjct: 27 LNSSVVTLIKDLNGNHVIQKCLNKLSNDDIQFIFDAICSNCIEVATHRHGCCVLQRCIDH 86
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
S+ Q+ +I +TN LV+ + ++ +L L + + I + + L
Sbjct: 87 ASDSQKVQIAKEITNHALNLVQDPFGNYVVQYILDLGDARFSEPLIHRFIGNI----CLL 142
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+ VI+ C++ L+ E+ + D V+Q ++Y+ QR++
Sbjct: 143 SVQKFSSNVIEKCIRMAEPPTRSLLIEELPKKIGSLIRDSYANYVIQTSLDYADSTQRKQ 202
Query: 331 LVAE 334
L+ +
Sbjct: 203 LMKD 206
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 312 GCCVLQHCVEYSKGAQRERLVAEIIANALL-LAEDCYGNYVVQHLLALRVPQITASLLRQ 370
G +Q +EY ++ ++V + ++++ L +D GN+V+Q L +
Sbjct: 3 GTRAVQKMIEYLSTPEQIKIVINALNSSVVTLIKDLNGNHVIQKCLNKLSNDDIQFIFDA 62
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ + + + +++G V++RC+ + + Q +I E+ + + L+ PFGNYV+Q L
Sbjct: 63 ICSNCIEVATHRHGCCVLQRCIDHASDSQKVQIAKEI--TNHALNLVQDPFGNYVVQYIL 120
Query: 431 LVSKVRLFSSPPI 443
+ R FS P I
Sbjct: 121 DLGDAR-FSEPLI 132
>gi|14719326|gb|AAK73144.1|AC079022_17 putative pumilio/Mpt5 family RNA-binding protein [Oryza sativa]
Length = 851
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 176/368 (47%), Gaps = 28/368 (7%)
Query: 77 PLVENGFFSHPCQEAEPINQDSSILNLLHNHNFDGLRSNGNELSSVPRNQWMSSLSLKRN 136
PL+ S P P+ + + G+R+ G S W L K N
Sbjct: 442 PLMSPVLPSSPAAPGSPLRHGERSMRMQ-----SGIRNFGGSFGS-----WNPDLGGKMN 491
Query: 137 ---------QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEV 187
++ + L ++ G++V + DQYG R +Q+ + + EE +M+F E+
Sbjct: 492 INMMPSLLEEFKSNKSKSYELSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEI 551
Query: 188 IDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
+ + LM D FGNYVVQK E S Q + L +++ + L +G R + K +
Sbjct: 552 MPQALTLMTDVFGNYVVQKFFEHGSPTQIKELADQLIG---RVLALSLQMYGCRVIQKAI 608
Query: 248 ENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIA 307
E + QQ +V A L + +D NG++VIQ C++ +++++ ++
Sbjct: 609 EVVGLDQQTKMV-AELDGHVMRCVRDQNGNHVIQKCIECIPQHAIQFIVSTFYGQVVMLS 667
Query: 308 TDKSGCCVLQHCVEYSKGAQRERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITAS 366
T GC V+Q +E+ ++++ EI+ + LLA+D YGNYVVQH+L P ++
Sbjct: 668 THPYGCRVIQRVLEHCDDPTTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSA 727
Query: 367 LLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVS----MLLMHPFG 422
++ +L G V S K+ SNV+E+CL + +I E+L S N S +++ F
Sbjct: 728 IIEKLIGQIVQMSQQKFASNVIEKCLAFGNPVERQILISEMLGSTNESEHLEVMMKDQFA 787
Query: 423 NYVIQSAL 430
NYV+Q L
Sbjct: 788 NYVVQKVL 795
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ ++ E +++ E++ E +M D F N
Sbjct: 729 IEKLIGQIVQMSQQKFASNVIEKCLAFGNPVERQILISEMLGSTNESEHLEVMMKDQFAN 788
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 789 YVVQKVLETCDDQQREAILTRIKAHLNTLKKYTYGKHIVARVEKLV 834
>gi|357443169|ref|XP_003591862.1| 60S ribosomal protein L4 [Medicago truncatula]
gi|355480910|gb|AES62113.1| 60S ribosomal protein L4 [Medicago truncatula]
Length = 1176
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 151/301 (50%), Gaps = 22/301 (7%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ ++V + DQYG R +Q+ + + EE IF E++ LM D FGNYV+QK
Sbjct: 640 LSDIIDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARALMTDVFGNYVIQKF 699
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ QR + LT ++ + L +G R + K LE + QQ +V + L
Sbjct: 700 FEHGTDSQRKELANQLTG---HVLPLSLQMYGCRVIQKALEVVDVDQQSQMV-SELSGAI 755
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ C++ ++++ ++T GC V+Q +E+ +
Sbjct: 756 MKCVRDQNGNHVIQKCIESVPQNRIQFIITSFYGQVVALSTHPYGCRVIQRVLEHCDDLK 815
Query: 328 -RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+E ++ EI+ + LA+D YGNYV+QH+L P ++ +L G V S K+ SN
Sbjct: 816 TQEIIMEEIMQSVCTLAQDQYGNYVIQHILEHGKPNERTIVISKLAGQIVKMSQQKFASN 875
Query: 387 VVERCLLESGEEQSTRIIIELLRSP-----------------NVSMLLMHPFGNYVIQSA 429
V+E+CL E+ ++ E+L + N+ ++ PFGNYV+Q
Sbjct: 876 VIEKCLAFGSPEERQILVNEMLGTSDENEPLQRFQVNDDMACNMQAMMKDPFGNYVVQKV 935
Query: 430 L 430
L
Sbjct: 936 L 936
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 134/276 (48%), Gaps = 24/276 (8%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G+++ L+ YGCR +Q+ + + ++ + E+ + + + D GN+V+QK +E
Sbjct: 715 LTGHVLPLSLQMYGCRVIQKALEVVDVDQQSQMVSELSGAIMKCVRDQNGNHVIQKCIES 774
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ RI ++T+ Q+V + + +G R + ++LE+ + + +++ + TL
Sbjct: 775 VPQ---NRIQFIITSFYGQVVALSTHPYGCRVIQRVLEHCDDLKTQEIIMEEIMQSVCTL 831
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YVIQ+ ++H + +++++A ++ K V++ C+ + +R+
Sbjct: 832 AQDQYGNYVIQHILEHGKPNERTIVISKLAGQIVKMSQQKFASNVIEKCLAFGSPEERQI 891
Query: 331 LVAEIIA-------------------NALLLAEDCYGNYVVQHLLALRVPQITASLLRQL 371
LV E++ N + +D +GNYVVQ +L Q +L ++
Sbjct: 892 LVNEMLGTSDENEPLQRFQVNDDMACNMQAMMKDPFGNYVVQKVLETCDDQSLELILSRI 951
Query: 372 EGHYVSFSCNKYGSNVVERC--LLESGEEQSTRIII 405
+ H + YG ++V R L+ +GE + I +
Sbjct: 952 KVHLNALKRYTYGKHIVSRVEKLITTGERMESMIFV 987
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 241 RAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVA 300
R LL+ N + L+ + V + D G IQ ++ S E+ + E+
Sbjct: 621 RFASSLLDEFKNNKTKPFELSDIIDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEIL 680
Query: 301 DNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRV 360
+ + TD G V+Q E+ +QR+ L ++ + L L+ YG V+Q L +
Sbjct: 681 PHARALMTDVFGNYVIQKFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKALEVVD 740
Query: 361 PQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHP 420
+ ++ +L G + ++ G++V+++C +ES + + II V L HP
Sbjct: 741 VDQQSQMVSELSGAIMKCVRDQNGNHVIQKC-IESVPQNRIQFIITSFYG-QVVALSTHP 798
Query: 421 FGNYVIQSAL 430
+G VIQ L
Sbjct: 799 YGCRVIQRVL 808
>gi|218195953|gb|EEC78380.1| hypothetical protein OsI_18154 [Oryza sativa Indica Group]
Length = 862
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 167/334 (50%), Gaps = 23/334 (6%)
Query: 111 GLRSNGNELSSVPRNQWMSSLSLKRN---------QWLQDSFDCSSLRDLRGNIVALAKD 161
G+R+ G S W L K N ++ + L ++ G++V + D
Sbjct: 482 GIRNFGGSFGS-----WNPDLGGKMNINMMPSLLEEFKSNKSKSYELSEIAGHVVEFSAD 536
Query: 162 QYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILL 221
QYG R +Q+ + + EE +M+F E++ + LM D FGNYVVQK E S Q +
Sbjct: 537 QYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSPTQIKELAD 596
Query: 222 MLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQ 281
L +++ + L +G R + K +E + QQ +V A L + +D NG++VIQ
Sbjct: 597 QLIG---RVLALSLQMYGCRVIQKAIEVVGLDQQTKMV-AELDGHVMRCVRDQNGNHVIQ 652
Query: 282 YCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVA-EIIANAL 340
C++ +++++ ++T GC V+Q +E+ ++++ EI+ +
Sbjct: 653 KCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPTTQQIMMDEILQSVC 712
Query: 341 LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQS 400
LLA+D YGNYVVQH+L P ++++ +L G V S K+ SNV+E+CL +
Sbjct: 713 LLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLAFGNPVER 772
Query: 401 TRIIIELLRSPNVS----MLLMHPFGNYVIQSAL 430
+I E+L S N S +++ F NYV+Q L
Sbjct: 773 QILIGEMLGSTNESEHLEVMMKDQFANYVVQKVL 806
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ ++ E +++ E++ E +M D F N
Sbjct: 740 IEKLIGQIVQMSQQKFASNVIEKCLAFGNPVERQILIGEMLGSTNESEHLEVMMKDQFAN 799
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 800 YVVQKVLETCDDQQREAILTRIKAHLNTLKKYTYGKHIVARVEKLV 845
>gi|256272310|gb|EEU07294.1| Puf3p [Saccharomyces cerevisiae JAY291]
Length = 883
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 164/306 (53%), Gaps = 25/306 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+ + KDQ+G R +QR +++ P E E+IF E+ D EL D FGNYV+QK
Sbjct: 540 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 599
Query: 208 VELCSEEQRTRILLMLTNDDFQ--LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
E S+ Q+ ++ D F+ + ++ L + R + K LE + + Q+I LVL L
Sbjct: 600 FEFGSKIQKNTLV-----DQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVL-ELSD 653
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
+ + KD NG++VIQ ++ E ++L+ + + Y ++T GC V+Q +E+
Sbjct: 654 SVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSS 713
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLA------LRVPQITASLLRQLEGHYVSFS 379
+E ++ E+ L +D YGNYV+Q++L + I ++ + + V +S
Sbjct: 714 EDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANNVVEYS 773
Query: 380 CNKYGSNVVERCLLESGEEQSTRIIIELL-RSPNVS--------MLLM--HPFGNYVIQS 428
+K+ SNVVE+ +L ++Q II ++L R N + M+LM F NYVIQ
Sbjct: 774 KHKFASNVVEKSILYGSKDQKDSIISKILPRDKNHALNLEDDSPMILMIKDQFANYVIQK 833
Query: 429 ALLVSK 434
+ VS+
Sbjct: 834 LVNVSE 839
>gi|390179097|ref|XP_003736803.1| GA30209, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859711|gb|EIM52876.1| GA30209, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 1192
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 153/289 (52%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK
Sbjct: 761 LRDLLNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKF 820
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+ + + + QL L +G R + K LE+++ P+Q ++ L
Sbjct: 821 FEFGTPEQKNTLGMQVKGHVLQL---ALQMYGCRVIQKALESIS-PEQQQEIVHELDGHV 876
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++N Y ++T GC V+Q +E+ Q
Sbjct: 877 LKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQ 936
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ N L +D YGNYV+QH+L + + L+ + G + S +K+ SNV
Sbjct: 937 TTPILDELHENTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNV 996
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + T +I E+ + +++ + NYV+Q + VS+
Sbjct: 997 VEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSE 1045
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 125/243 (51%), Gaps = 12/243 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +E
Sbjct: 836 VKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIE- 894
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + + L + F+ L+TH G R + ++LE+ T +Q + +L L
Sbjct: 895 CVDP----VALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTA-EQTTPILDELHENTE 949
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED L+N V ++ K V++ CV ++ +R
Sbjct: 950 QLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGER 1009
Query: 329 ERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H + YG
Sbjct: 1010 TGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMTALRKYTYG 1069
Query: 385 SNV 387
++
Sbjct: 1070 KHI 1072
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + + + +E+ Y
Sbjct: 746 RLLEDFRNQRYPNLQLRDLLNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAY 805
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q+ L ++ + L LA YG V+Q L P+
Sbjct: 806 SLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQ 865
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++ +L+GH + ++ G++VV++C +E + + + II + V L HP+G
Sbjct: 866 QEIVHELDGHVLKCVKDQNGNHVVQKC-IECVDPVALQFIINAFKG-QVYSLSTHPYGCR 923
Query: 425 VIQSAL 430
VIQ L
Sbjct: 924 VIQRIL 929
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 64/140 (45%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +L N L +DQYG +Q + +E+ ++ V +V L F + VV+K
Sbjct: 941 LDELHENTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 1000
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + +RT ++ + + + + + V++ + +++ P Q+ ++ +RP
Sbjct: 1001 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHM 1060
Query: 268 VTLTKDTNGHYVIQYCVKHF 287
L K T G ++ K++
Sbjct: 1061 TALRKYTYGKHINAKLEKYY 1080
>gi|207343240|gb|EDZ70765.1| YLL013Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323332462|gb|EGA73870.1| Puf3p [Saccharomyces cerevisiae AWRI796]
Length = 879
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 164/306 (53%), Gaps = 25/306 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+ + KDQ+G R +QR +++ P E E+IF E+ D EL D FGNYV+QK
Sbjct: 536 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 595
Query: 208 VELCSEEQRTRILLMLTNDDFQ--LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
E S+ Q+ ++ D F+ + ++ L + R + K LE + + Q+I LVL L
Sbjct: 596 FEFGSKIQKNTLV-----DQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVL-ELSD 649
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
+ + KD NG++VIQ ++ E ++L+ + + Y ++T GC V+Q +E+
Sbjct: 650 SVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSS 709
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLA------LRVPQITASLLRQLEGHYVSFS 379
+E ++ E+ L +D YGNYV+Q++L + I ++ + + V +S
Sbjct: 710 EDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANNVVEYS 769
Query: 380 CNKYGSNVVERCLLESGEEQSTRIIIELL-RSPNVS--------MLLM--HPFGNYVIQS 428
+K+ SNVVE+ +L ++Q II ++L R N + M+LM F NYVIQ
Sbjct: 770 KHKFASNVVEKSILYGSKDQKDSIISKILPRDKNHALNLEDDSPMILMIKDQFANYVIQK 829
Query: 429 ALLVSK 434
+ VS+
Sbjct: 830 LVNVSE 835
>gi|158828235|gb|ABW81112.1| putative pumilio Mpt5-2 [Boechera divaricarpa]
Length = 967
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 157/288 (54%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G++V + DQYG R +Q+ + + +E M++ E++ + LM D FGNYV+QK
Sbjct: 627 LSEIAGHVVEFSADQYGSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFGNYVIQKF 686
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E QR + L ++ ++ + L +G R + K +E + Q+I +V L
Sbjct: 687 FEHGLPPQRRELAEKLFDN---VLPLSLQMYGCRVIQKAIEVVDLDQKIKMV-KELDGHV 742
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++V+Q C++ E+ +++++ + ++T GC V+Q +E+
Sbjct: 743 MRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPD 802
Query: 328 RE-RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ +++ EI++ +LA+D YGNYVVQH+L P ++++L G V S K+ SN
Sbjct: 803 TQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASN 862
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL G E+ ++ E+L + + + ++ F NYV+Q L
Sbjct: 863 VVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL 910
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE + + L+ + V + D G IQ ++ + ++ + E+
Sbjct: 613 LLEEFKSNKTRGFELSEIAGHVVEFSADQYGSRFIQQKLETATTDEKNMVYEEIMPQALA 672
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ QR L ++ N L L+ YG V+Q + +
Sbjct: 673 LMTDVFGNYVIQKFFEHGLPPQRRELAEKLFDNVLPLSLQMYGCRVIQKAIEVVDLDQKI 732
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++++L+GH + ++ G++VV++C +E E++ II +V L HP+G V
Sbjct: 733 KMVKELDGHVMRCVRDQNGNHVVQKC-IECVPEENIEFIISTFFG-HVVTLSTHPYGCRV 790
Query: 426 IQSAL 430
IQ L
Sbjct: 791 IQRVL 795
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 62/124 (50%), Gaps = 15/124 (12%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L G IV +++ ++ +++ ++ EE E++ E++ E +M D F N
Sbjct: 844 IKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFAN 903
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKL---------LENLTN 252
YVVQK++E C ++QR IL + L + H + + KL L++LT
Sbjct: 904 YVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHVVARIEKLVAAGERRMALQSLTQ 963
Query: 253 PQQI 256
PQ +
Sbjct: 964 PQMV 967
>gi|151941156|gb|EDN59534.1| pumilio-homology domain family [Saccharomyces cerevisiae YJM789]
Length = 892
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 164/306 (53%), Gaps = 25/306 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+ + KDQ+G R +QR +++ P E E+IF E+ D EL D FGNYV+QK
Sbjct: 549 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 608
Query: 208 VELCSEEQRTRILLMLTNDDFQ--LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
E S+ Q+ ++ D F+ + ++ L + R + K LE + + Q+I LVL L
Sbjct: 609 FEFGSKIQKNTLV-----DQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVL-ELSD 662
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
+ + KD NG++VIQ ++ E ++L+ + + Y ++T GC V+Q +E+
Sbjct: 663 SVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSS 722
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLA------LRVPQITASLLRQLEGHYVSFS 379
+E ++ E+ L +D YGNYV+Q++L + I ++ + + V +S
Sbjct: 723 EDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANNVVEYS 782
Query: 380 CNKYGSNVVERCLLESGEEQSTRIIIELL-RSPNVS--------MLLM--HPFGNYVIQS 428
+K+ SNVVE+ +L ++Q II ++L R N + M+LM F NYVIQ
Sbjct: 783 KHKFASNVVEKSILYGSKDQKDSIISKILPRDKNHALNLEDDSPMILMIKDQFANYVIQK 842
Query: 429 ALLVSK 434
+ VS+
Sbjct: 843 LVNVSE 848
>gi|344232856|gb|EGV64729.1| ARM repeat-containing protein [Candida tenuis ATCC 10573]
Length = 782
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 159/293 (54%), Gaps = 18/293 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+ V KDQ+G R +Q+ + +EE E+IF E+ ELM D FGNYV+QK
Sbjct: 438 LKDIYGHAVEFTKDQHGSRFIQQKLPHSSEEEKEVIFNEIRVISYELMTDVFGNYVIQKY 497
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S Q+ +L + ++L L +G R V + LE L QI ++ L+
Sbjct: 498 FEHGSMTQKKILLESMLGHIYEL---SLQMYGCRVVQRALEALELDGQIKII-TELKNHI 553
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ ++ E+ +++L + Y ++T GC V+Q +E+S A
Sbjct: 554 LICAKDQNGNHVIQKSIERIPFENVRFILEALESQVYHLSTHPYGCRVIQRLLEHSDVAD 613
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+++++AE+ L +D YGNYV+QH+L ++L+ + G V+FS +K+ SNV
Sbjct: 614 QDKILAELNRFIFYLIQDQYGNYVMQHILERGNMVDREAILKVVLGSVVNFSKHKFASNV 673
Query: 388 VERCLLESGEEQSTRIIIELL-------------RSPNVSMLLMHPFGNYVIQ 427
+E+C+ EQ +I+ E+L SP +++++ + NYVIQ
Sbjct: 674 IEKCIKFGTFEQRKKILHEVLLGNEDLSIEDVEDDSP-LALMMKDQYANYVIQ 725
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 106/223 (47%), Gaps = 18/223 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L + G+I L+ YGCR +QR + +L + I E+ + + D GN+V+QK
Sbjct: 510 LESMLGHIYELSLQMYGCRVVQRALEALELDGQIKIITELKNHILICAKDQNGNHVIQKS 569
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E E IL L + Q+ + + +G R + +LLE+ Q +LA L
Sbjct: 570 IERIPFENVRFILEALES---QVYHLSTHPYGCRVIQRLLEHSDVADQ-DKILAELNRFI 625
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
L +D G+YV+Q+ ++ + D + +L V + + K V++ C+++ Q
Sbjct: 626 FYLIQDQYGNYVMQHILERGNMVDREAILKVVLGSVVNFSKHKFASNVIEKCIKFGTFEQ 685
Query: 328 RERLVAEII--------------ANALLLAEDCYGNYVVQHLL 356
R++++ E++ + L+ +D Y NYV+Q L+
Sbjct: 686 RKKILHEVLLGNEDLSIEDVEDDSPLALMMKDQYANYVIQKLV 728
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 2/138 (1%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
+Y L ++ + D+ G +Q + +S ++E + EI + L D +GNYV+
Sbjct: 435 EYFLKDIYGHAVEFTKDQHGSRFIQQKLPHSSEEEKEVIFNEIRVISYELMTDVFGNYVI 494
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q LL + GH S YG VV+R L + +II EL +
Sbjct: 495 QKYFEHGSMTQKKILLESMLGHIYELSLQMYGCRVVQRALEALELDGQIKIITELKN--H 552
Query: 413 VSMLLMHPFGNYVIQSAL 430
+ + GN+VIQ ++
Sbjct: 553 ILICAKDQNGNHVIQKSI 570
>gi|20465637|gb|AAM20149.1| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis
thaliana]
Length = 972
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 156/288 (54%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G++V + DQYG R +Q+ + + +E M++ E++ LM D FGNYV+QK
Sbjct: 632 LAEIAGHVVEFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFGNYVIQKF 691
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E QR + L ++ ++ + L +G R + K +E + Q+I +V L
Sbjct: 692 FEHGLPPQRRELADKLFDN---VLPLSLQMYGCRVIQKAIEVVDLDQKIKMV-KELDGHV 747
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++V+Q C++ E+ +++++ N ++T GC V+Q +E+
Sbjct: 748 MRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPD 807
Query: 328 RE-RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ +++ EI++ +LA+D YGNYV+QH+L P ++++L G V S K+ SN
Sbjct: 808 TQSKVMDEIMSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASN 867
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL G E+ ++ E+L + + + ++ F NYV+Q L
Sbjct: 868 VVEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL 915
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
+LE + + LA + V + D G IQ ++ + ++ + E+ +
Sbjct: 618 MLEEFKSNKTRGFELAEIAGHVVEFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHALA 677
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ QR L ++ N L L+ YG V+Q + +
Sbjct: 678 LMTDVFGNYVIQKFFEHGLPPQRRELADKLFDNVLPLSLQMYGCRVIQKAIEVVDLDQKI 737
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++++L+GH + ++ G++VV++C +E E++ II NV L HP+G V
Sbjct: 738 KMVKELDGHVMRCVRDQNGNHVVQKC-IECVPEENIEFIISTFFG-NVVTLSTHPYGCRV 795
Query: 426 IQSAL 430
IQ L
Sbjct: 796 IQRVL 800
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 15/122 (12%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L G IV +++ ++ +++ ++ EE E + E++ E +M D F N
Sbjct: 849 IKELAGKIVQMSQQKFASNVVEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMMKDQFAN 908
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKL---------LENLTN 252
YVVQK++E C ++QR IL + L + H + V KL L++LT
Sbjct: 909 YVVQKVLETCDDQQRELILGRIKVHLNALKKYTYGKHIVARVEKLVAAGERRMALQSLTQ 968
Query: 253 PQ 254
PQ
Sbjct: 969 PQ 970
>gi|449328595|gb|AGE94872.1| RNA-binding protein [Encephalitozoon cuniculi]
Length = 530
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 163/286 (56%), Gaps = 17/286 (5%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
S++D+ V+++KDQ G R +QR M S+ + EI F ++D EL + FGNYV+QK
Sbjct: 217 SMKDI---CVSISKDQEGSRCIQRKMDSISRAEISWFFNNIVDAAPELSANLFGNYVIQK 273
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
++ L +EE+R R++ L Q+ + ++ +G R V KL++ ++ + +L +R
Sbjct: 274 IIPLLTEEERARLIAKLAK---QINLLSVHPYGCRVVQKLVDVSSD---VDFILEEVRDN 327
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ L +D NG++VIQ C++ +D +L + ++N +AT K GC V+Q +E+ +
Sbjct: 328 LLELIEDQNGNHVIQKCIEKC--KDRNIILQQFSENSLFLATHKYGCRVIQRMLEFCRED 385
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLAL-RVPQITASLLRQLEGHYVSFSCNKYGS 385
+ + +V +I+N L +D YGNYV+QH+LA+ + + + + +E Y C K+ S
Sbjct: 386 EIKNIVEVLISNIKTLVDDQYGNYVIQHILAVGKEDEKNLVIEKIIEKSYELSRC-KFSS 444
Query: 386 NVVERCLLESGEEQSTRIIIELLR----SPNVSMLLMHPFGNYVIQ 427
NVVE+C+ S Q R + + L P + + + +GNYV+Q
Sbjct: 445 NVVEQCVKLSNNGQRERFLAKFLEPVGSKPGMYSMCVDMYGNYVVQ 490
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 163 YGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLM 222
YGCR +Q+ + +++ I EV D + EL+ D GN+V+QK +E C + R IL
Sbjct: 302 YGCRVVQKLVDV--SSDVDFILEEVRDNLLELIEDQNGNHVIQKCIEKCKD--RNIILQQ 357
Query: 223 LTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQY 282
+ + L + +G R + ++LE +I ++ L TL D G+YVIQ+
Sbjct: 358 FSENSLFLA---THKYGCRVIQRMLE-FCREDEIKNIVEVLISNIKTLVDDQYGNYVIQH 413
Query: 283 CVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA----- 337
+ ++ ++ ++ + Y ++ K V++ CV+ S QRER +A+ +
Sbjct: 414 ILAVGKEDEKNLVIEKIIEKSYELSRCKFSSNVVEQCVKLSNNGQRERFLAKFLEPVGSK 473
Query: 338 -NALLLAEDCYGNYVVQHL 355
+ D YGNYVVQ L
Sbjct: 474 PGMYSMCVDMYGNYVVQRL 492
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 7/204 (3%)
Query: 231 VRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHE 290
V I + G R + + +++++ + IS + A L+ + G+YVIQ + + E
Sbjct: 223 VSISKDQEGSRCIQRKMDSISRAE-ISWFFNNIVDAAPELSANLFGNYVIQKIIPLLTEE 281
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ L+ ++A ++ GC V+Q V+ S + ++ E+ N L L ED GN+
Sbjct: 282 ERARLIAKLAKQINLLSVHPYGCRVVQKLVDVSSDV--DFILEEVRDNLLELIEDQNGNH 339
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
V+Q + + +L+Q + + + +KYG V++R +LE E + I+E+L S
Sbjct: 340 VIQK--CIEKCKDRNIILQQFSENSLFLATHKYGCRVIQR-MLEFCREDEIKNIVEVLIS 396
Query: 411 PNVSMLLMHPFGNYVIQSALLVSK 434
N+ L+ +GNYVIQ L V K
Sbjct: 397 -NIKTLVDDQYGNYVIQHILAVGK 419
>gi|15227051|ref|NP_180482.1| pumilio 2 [Arabidopsis thaliana]
gi|334184556|ref|NP_001189630.1| pumilio 2 [Arabidopsis thaliana]
gi|75217075|sp|Q9ZW06.1|PUM2_ARATH RecName: Full=Pumilio homolog 2; Short=APUM-2; Short=AtPUM2
gi|3980413|gb|AAC95216.1| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis
thaliana]
gi|330253126|gb|AEC08220.1| pumilio 2 [Arabidopsis thaliana]
gi|330253127|gb|AEC08221.1| pumilio 2 [Arabidopsis thaliana]
Length = 972
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 156/288 (54%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G++V + DQYG R +Q+ + + +E M++ E++ LM D FGNYV+QK
Sbjct: 632 LAEIAGHVVEFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFGNYVIQKF 691
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E QR + L ++ ++ + L +G R + K +E + Q+I +V L
Sbjct: 692 FEHGLPPQRRELADKLFDN---VLPLSLQMYGCRVIQKAIEVVDLDQKIKMV-KELDGHV 747
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++V+Q C++ E+ +++++ N ++T GC V+Q +E+
Sbjct: 748 MRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPD 807
Query: 328 RE-RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ +++ EI++ +LA+D YGNYV+QH+L P ++++L G V S K+ SN
Sbjct: 808 TQSKVMDEIMSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASN 867
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL G E+ ++ E+L + + + ++ F NYV+Q L
Sbjct: 868 VVEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL 915
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
+LE + + LA + V + D G IQ ++ + ++ + E+ +
Sbjct: 618 MLEEFKSNKTRGFELAEIAGHVVEFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHALA 677
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ QR L ++ N L L+ YG V+Q + +
Sbjct: 678 LMTDVFGNYVIQKFFEHGLPPQRRELADKLFDNVLPLSLQMYGCRVIQKAIEVVDLDQKI 737
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++++L+GH + ++ G++VV++C +E E++ II NV L HP+G V
Sbjct: 738 KMVKELDGHVMRCVRDQNGNHVVQKC-IECVPEENIEFIISTFFG-NVVTLSTHPYGCRV 795
Query: 426 IQSAL 430
IQ L
Sbjct: 796 IQRVL 800
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 15/122 (12%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L G IV +++ ++ +++ ++ EE E + E++ E +M D F N
Sbjct: 849 IKELAGKIVQMSQQKFASNVVEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMMKDQFAN 908
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKL---------LENLTN 252
YVVQK++E C ++QR IL + L + H + V KL L++LT
Sbjct: 909 YVVQKVLETCDDQQRELILGRIKVHLNALKKYTYGKHIVARVEKLVAAGERRMALQSLTQ 968
Query: 253 PQ 254
PQ
Sbjct: 969 PQ 970
>gi|289449229|dbj|BAI77478.1| pumilio [Bombyx mori]
Length = 416
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 161/306 (52%), Gaps = 10/306 (3%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL +IV ++DQ+G R +Q+ + +E +M+F E+I
Sbjct: 62 RSRLLEDFRNNRFPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATVQEKQMVFNEIIGA 121
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
LM D FGNYV+QK E + EQ+T + + ++ + L +G R + K LE++
Sbjct: 122 AYSLMTDVFGNYVIQKFFEFGTTEQKTTLAQKVRG---HVLNLALQMYGSRVIQKALESI 178
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
P+Q V+ L + KD NG++V+Q C++ ++++N A Y ++T
Sbjct: 179 P-PEQQQEVVRELDGHVLKCVKDQNGNHVVQKCIECVEPSALQFIINAFAGQVYALSTHP 237
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ A+ L D YGNYVVQH+L + + L+
Sbjct: 238 YGCRVIQRILEHCTPEQTAPVLNELHAHTDQLITDQYGNYVVQHVLEHGAGEDRSRLVAA 297
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQS 428
+ G + S +K+ SNVVE+C+ + + +I EL + +++ F NYV+Q
Sbjct: 298 VRGKVLQLSQHKFASNVVEKCVTHATRNERALLIDELCGFNDNALHVMMKDQFANYVVQK 357
Query: 429 ALLVSK 434
+ V++
Sbjct: 358 MIDVAE 363
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 117/259 (45%), Gaps = 50/259 (19%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ +RG+++ LA YG R +Q+ + S+P E+ + + E+ V + + D GN+VVQK +
Sbjct: 152 QKVRGHVLNLALQMYGSRVIQKALESIPPEQQQEVVRELDGHVLKCVKDQNGNHVVQKCI 211
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C E + ++ + F L+TH G R + ++LE+ T P+Q + VL L
Sbjct: 212 E-CVEPSALQFII----NAFAGQVYALSTHPYGCRVIQRILEHCT-PEQTAPVLNELHAH 265
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L D G+YV+Q+ ++H + ED L+ V ++ K V++ CV ++
Sbjct: 266 TDQLITDQYGNYVVQHVLEHGAGEDRSRLVAAVRGKVLQLSQHKFASNVVEKCVTHATRN 325
Query: 327 QRERLVAEIIA---NAL-LLAED------------------------------------C 346
+R L+ E+ NAL ++ +D
Sbjct: 326 ERALLIDELCGFNDNALHVMMKDQFANYVVQKMIDVAEPTQRKVLMHKIRPHIGSLRKYT 385
Query: 347 YGNYVVQHL--LALRVPQI 363
YG +++ L ++ P++
Sbjct: 386 YGKHIIAKLEKFFMKAPEL 404
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 61/140 (43%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +L + L DQYG +Q + E+ + V +V +L F + VV+K
Sbjct: 259 LNELHAHTDQLITDQYGNYVVQHVLEHGAGEDRSRLVAAVRGKVLQLSQHKFASNVVEKC 318
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + +R ++ L + + + + V++ + ++ P Q +++ +RP
Sbjct: 319 VTHATRNERALLIDELCGFNDNALHVMMKDQFANYVVQKMIDVAEPTQRKVLMHKIRPHI 378
Query: 268 VTLTKDTNGHYVIQYCVKHF 287
+L K T G ++I K F
Sbjct: 379 GSLRKYTYGKHIIAKLEKFF 398
>gi|158828189|gb|ABW81068.1| Mpt5-3 [Arabidopsis lyrata subsp. lyrata]
Length = 968
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 157/288 (54%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G++V + DQYG R +Q+ + + +E M++ E++ + LM D FGNYV+QK
Sbjct: 623 LSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFGNYVIQKF 682
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E QR + L ++ ++ + L +G R + K +E + Q+I +V L
Sbjct: 683 FEHGLPPQRRELGEKLIDN---VLPLSLQMYGCRVIQKAIEVVDLDQKIKMV-KELDGHV 738
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++V+Q C++ E+ +++++ + ++T GC V+Q +E+
Sbjct: 739 MRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPD 798
Query: 328 RE-RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ +++ EI++ +LA+D YGNYVVQH+L P ++++L G V S K+ SN
Sbjct: 799 TQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASN 858
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL G E+ ++ E+L + + + ++ F NYV+Q L
Sbjct: 859 VVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL 906
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
+LE + + L+ + V + D G IQ ++ + ++ + E+
Sbjct: 609 MLEEFKSNKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALA 668
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ QR L ++I N L L+ YG V+Q + +
Sbjct: 669 LMTDVFGNYVIQKFFEHGLPPQRRELGEKLIDNVLPLSLQMYGCRVIQKAIEVVDLDQKI 728
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++++L+GH + ++ G++VV++C +E E++ II +V L HP+G V
Sbjct: 729 KMVKELDGHVMRCVRDQNGNHVVQKC-IECVPEENIEFIISTFFG-HVVTLSTHPYGCRV 786
Query: 426 IQSAL 430
IQ L
Sbjct: 787 IQRVL 791
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L G IV +++ ++ +++ ++ EE E++ E++ E +M D F N
Sbjct: 840 IKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFAN 899
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 900 YVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHIVARVEKLV 945
>gi|357148484|ref|XP_003574782.1| PREDICTED: pumilio homolog 5-like [Brachypodium distachyon]
Length = 983
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 178/358 (49%), Gaps = 38/358 (10%)
Query: 111 GLRSNGNELSSVPRNQWMSSLSLKRNQWLQDSFD----CSSLRDLRGN------------ 154
G R++ S RN M++ S + Q ++ FD CS L +L+ N
Sbjct: 600 GSRNDSVRFQSPSRN--MTASSGIQGQRDREKFDGPKACSFLEELKSNRARRVELSDITS 657
Query: 155 -IVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSE 213
IV + DQ+G R +Q+ + + EE +F EV+ LM D FGNYV+QK E +
Sbjct: 658 RIVEYSADQHGSRFIQQKLENCTAEEKAAVFAEVLPHATSLMTDVFGNYVIQKFFEHGTP 717
Query: 214 EQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKD 273
EQR + L ++ + L +G R V K LE L Q+I LVL L + +D
Sbjct: 718 EQRRDLGTKLVG---HVLPLSLQMYGCRVVQKALEVLELDQKIELVLE-LDGNIMRCVRD 773
Query: 274 TNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG-AQRERLV 332
NG++VIQ C++ E ++++ ++ GC V+Q +E+ G +Q + ++
Sbjct: 774 QNGNHVIQKCIECVPTEHIGFVVSSFQGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCII 833
Query: 333 AEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCL 392
EI+ +A +LA+D YGNYV QH+L A ++ +L G V+ S NK+ SNV+E+C
Sbjct: 834 DEILQSACVLAQDQYGNYVTQHVLEKGKSHERAQIISKLAGQVVTMSQNKFASNVIEKCF 893
Query: 393 LESGEEQSTRIIIELLRSP--NVSMLLM--HPFGNYVIQS----------ALLVSKVR 436
+ +I E+++ N ++L M + NYV+Q LLVS+V+
Sbjct: 894 QHGDFAERDLLIREIVQQTEGNDTLLAMMKDQYANYVVQKILETCNDQQRELLVSRVK 951
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 130/260 (50%), Gaps = 12/260 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G+++ L+ YGCR +Q+ + L ++ + +E+ + + D GN+V+QK +E
Sbjct: 727 LVGHVLPLSLQMYGCRVVQKALEVLELDQKIELVLELDGNIMRCVRDQNGNHVIQKCIEC 786
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E I ++++ Q+ + ++ +G R + ++LE+ Q ++ + A L
Sbjct: 787 VPTEH---IGFVVSSFQGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIIDEILQSACVL 843
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YV Q+ ++ + +++++A ++ +K V++ C ++ A+R+
Sbjct: 844 AQDQYGNYVTQHVLEKGKSHERAQIISKLAGQVVTMSQNKFASNVIEKCFQHGDFAERDL 903
Query: 331 LVAEII----ANALLLA--EDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ EI+ N LLA +D Y NYVVQ +L Q L+ +++GH + YG
Sbjct: 904 LIREIVQQTEGNDTLLAMMKDQYANYVVQKILETCNDQQRELLVSRVKGHLQALRKYTYG 963
Query: 385 SNV---VERCLLESGEEQST 401
++ VE+ E G E +
Sbjct: 964 KHIASRVEQLCGEGGAESDS 983
>gi|323336546|gb|EGA77812.1| Puf3p [Saccharomyces cerevisiae Vin13]
Length = 879
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 164/306 (53%), Gaps = 25/306 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+ + KDQ+G R +QR +++ P E E+IF E+ D EL D FGNYV+QK
Sbjct: 536 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 595
Query: 208 VELCSEEQRTRILLMLTNDDFQ--LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
E S+ Q+ ++ D F+ + ++ L + R + K LE + + Q+I LVL L
Sbjct: 596 FEFGSKIQKNTLV-----DQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVL-ELSD 649
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
+ + KD NG++VIQ ++ E ++L+ + + Y ++T GC V+Q +E+
Sbjct: 650 SVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSS 709
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLA------LRVPQITASLLRQLEGHYVSFS 379
+E ++ E+ L +D YGNYV+Q++L + I ++ + + V +S
Sbjct: 710 EDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANNVVEYS 769
Query: 380 CNKYGSNVVERCLLESGEEQSTRIIIELL-RSPNVS--------MLLM--HPFGNYVIQS 428
+K+ SNVVE+ +L ++Q II ++L R N + M+LM F NYVIQ
Sbjct: 770 KHKFASNVVEKSILYGSKDQKDSIISKILPRDKNHALNLEDDSPMILMIKDQFANYVIQK 829
Query: 429 ALLVSK 434
+ VS+
Sbjct: 830 LVNVSE 835
>gi|449450756|ref|XP_004143128.1| PREDICTED: pumilio homolog 1-like [Cucumis sativus]
Length = 1043
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 154/292 (52%), Gaps = 11/292 (3%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
C L ++ G++ + DQYG R +Q+ + + +E MI+ E++ + LM D FGNYV+
Sbjct: 699 CFELSEIAGHVFEFSGDQYGSRFIQQKLETATADEKNMIYQEIMPQALALMTDVFGNYVI 758
Query: 205 QKLVELCSEEQRTRILLMLTNDDF-QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL 263
QK E QR L N F ++ + L +G R + K +E + Q+I +V L
Sbjct: 759 QKFFEHGLAAQRRE----LANKLFGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMV-GEL 813
Query: 264 RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
+ +D NG++VIQ C++ ++++ D ++T GC V+Q +E+
Sbjct: 814 DGHVMRCVRDQNGNHVIQKCIECVPESAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHC 873
Query: 324 KG-AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
K + R++ EI+ + +LA+D YGNYVVQH+L ++++++L G V S K
Sbjct: 874 KDETTQSRVMEEILGSVSMLAQDQYGNYVVQHVLEHGKSHERSAIIKELAGRIVQMSQQK 933
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
+ SNVVE+CL G + ++ E+L + + + ++ F NYV+Q L
Sbjct: 934 FASNVVEKCLTFGGPTERQLLVSEMLGTTDENEPLQAMMKDQFANYVVQKVL 985
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 284 VKHFSHEDTK-YLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLL 342
++ F TK + L+E+A + + + D+ G +Q +E + ++ + EI+ AL L
Sbjct: 689 LEEFKSNKTKCFELSEIAGHVFEFSGDQYGSRFIQQKLETATADEKNMIYQEIMPQALAL 748
Query: 343 AEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTR 402
D +GNYV+Q + L +L GH ++ S YG V+++ + +Q +
Sbjct: 749 MTDVFGNYVIQKFFEHGLAAQRRELANKLFGHVLTLSLQMYGCRVIQKAIEVVDLDQKIK 808
Query: 403 IIIELLRSPNVSMLLMHPFGNYVIQ 427
++ EL +V + GN+VIQ
Sbjct: 809 MVGEL--DGHVMRCVRDQNGNHVIQ 831
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE + + L+ + + D G IQ ++ + ++ + E+
Sbjct: 688 LLEEFKSNKTKCFELSEIAGHVFEFSGDQYGSRFIQQKLETATADEKNMIYQEIMPQALA 747
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ AQR L ++ + L L+ YG V+Q + +
Sbjct: 748 LMTDVFGNYVIQKFFEHGLAAQRRELANKLFGHVLTLSLQMYGCRVIQKAIEVVDLDQKI 807
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++ +L+GH + ++ G++V+++C +E E + I+ V L HP+G V
Sbjct: 808 KMVGELDGHVMRCVRDQNGNHVIQKC-IECVPESAIHFIVSTFFD-QVVTLSTHPYGCRV 865
Query: 426 IQSAL 430
IQ L
Sbjct: 866 IQRVL 870
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L G IV +++ ++ +++ ++ E +++ E++ E +M D F N
Sbjct: 919 IKELAGRIVQMSQQKFASNVVEKCLTFGGPTERQLLVSEMLGTTDENEPLQAMMKDQFAN 978
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 979 YVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIVARVEKLV 1024
>gi|39644512|gb|AAH24218.2| PUM2 protein, partial [Homo sapiens]
Length = 489
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 166/306 (54%), Gaps = 13/306 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 130 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 189
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 190 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 246
Query: 251 TNPQQ-ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATD 309
++ QQ IS ++ L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 247 SSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTH 306
Query: 310 KSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLR 369
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++
Sbjct: 307 PYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVS 366
Query: 370 QLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLMHP--FGNY 424
++ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NY
Sbjct: 367 EIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANY 426
Query: 425 VIQSAL 430
V+Q +
Sbjct: 427 VVQKMI 432
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 134/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ I + E
Sbjct: 200 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKE 259
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 260 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQ 314
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+
Sbjct: 315 RILEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVL 373
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLA 357
++ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++
Sbjct: 374 ALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMID 433
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 434 MAEPAQRKIIMHKIRPHITTLRKYTYGKHILAK 466
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + L+ YGCR +QR + E+ I E+ +L+
Sbjct: 290 QFIIDAF--------KGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ 341
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L L+ F +V C+ TH RA
Sbjct: 342 DQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALL 400
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +++ +RP TL K T G
Sbjct: 401 IDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYG 460
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 461 KHILAKLEKYY 471
>gi|449459894|ref|XP_004147681.1| PREDICTED: pumilio homolog 1-like [Cucumis sativus]
gi|449503257|ref|XP_004161912.1| PREDICTED: pumilio homolog 1-like [Cucumis sativus]
Length = 1016
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 154/291 (52%), Gaps = 9/291 (3%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
C L ++ G++ + DQYG R +Q+ + + EE +M+F E++ + LM D FGNYVV
Sbjct: 672 CFELSEIAGHVFEFSSDQYGSRFIQQKLETASVEEKDMVFHEIMPQALSLMTDVFGNYVV 731
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK E + Q + L ++ + L +G R + K +E + QQ +V L
Sbjct: 732 QKFFEHGTASQIRELADQLNG---HVLALSLQMYGCRVIQKAIEVVDVDQQTKMV-TELD 787
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+ +D NG++V+Q C++ E +++++ D ++T GC V+Q +E+
Sbjct: 788 GQIMRCVRDQNGNHVVQKCIECIPEEAIQFIVSTFYDQVVTLSTHPYGCRVIQRVLEHCH 847
Query: 325 GAQRER-LVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+ + ++ EI+ + LA+D YGNYVVQH+L P ++++++L G V S K+
Sbjct: 848 NPKTQHIMMDEILQSVCTLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKF 907
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
SNV+E+CL + ++ E+L + + + +++ F NYV+Q L
Sbjct: 908 ASNVIEKCLTFGTSAERQALVNEMLGTTDENEPLQVMMKDQFANYVVQKVL 958
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 2/155 (1%)
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
+ NG +V + S++ + L+E+A + + ++D+ G +Q +E + +++ +
Sbjct: 652 NMNGGFVSSLLDEFKSNKSKCFELSEIAGHVFEFSSDQYGSRFIQQKLETASVEEKDMVF 711
Query: 333 AEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCL 392
EI+ AL L D +GNYVVQ L QL GH ++ S YG V+++ +
Sbjct: 712 HEIMPQALSLMTDVFGNYVVQKFFEHGTASQIRELADQLNGHVLALSLQMYGCRVIQKAI 771
Query: 393 LESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQ 427
+Q T+++ EL + + GN+V+Q
Sbjct: 772 EVVDVDQQTKMVTEL--DGQIMRCVRDQNGNHVVQ 804
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
++ L G IV +++ ++ +++ ++ E + + E++ E +M D F N
Sbjct: 892 IKKLTGQIVQMSQQKFASNVIEKCLTFGTSAERQALVNEMLGTTDENEPLQVMMKDQFAN 951
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++Q IL + L + H + V KL+
Sbjct: 952 YVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLV 997
>gi|125528359|gb|EAY76473.1| hypothetical protein OsI_04410 [Oryza sativa Indica Group]
Length = 1046
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 159/311 (51%), Gaps = 22/311 (7%)
Query: 138 WLQDSFDCSSLRDLRGN-------------IVALAKDQYGCRHLQRTMSSLPKEEIEMIF 184
++ D+F S L + + N +V + DQYG R +Q+ + + EE +M+F
Sbjct: 686 YMNDNFPSSLLDEFKSNKARSFELAEIASHVVEFSADQYGSRFIQQKLETATVEEKDMVF 745
Query: 185 VEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVL 244
E++ + LM D FGNYVVQK E S QR + L ++ + L +G R +
Sbjct: 746 KEIMPQALSLMTDVFGNYVVQKFFEHGSAAQRRELADQLFG---HVLALSLQMYGCRVIQ 802
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
K +E + Q+ +V L + +D NG++VIQ C++ + +++++
Sbjct: 803 KAIEVVDLDQKTKMV-TELDGHIMRCVRDQNGNHVIQKCIECVPEDSIQFIISTFYGQVV 861
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQI 363
++T GC V+Q +E+ + + +V EI+ + +LA+D YGNYVVQH+L P
Sbjct: 862 PLSTHPYGCRVIQRVLEHCTYPKTQEIVMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHE 921
Query: 364 TASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMH 419
+ ++ +L G + S K+ SNVVE+CL G + +I E+L + + + ++
Sbjct: 922 RSIIIEKLAGQIIQMSQQKFASNVVEKCLTFGGPAEREVLINEMLGTTDENEPLQAMMKD 981
Query: 420 PFGNYVIQSAL 430
FGNYV+Q L
Sbjct: 982 QFGNYVVQKVL 992
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G I+ +++ ++ +++ ++ E E++ E++ E +M D FGN
Sbjct: 926 IEKLAGQIIQMSQQKFASNVVEKCLTFGGPAEREVLINEMLGTTDENEPLQAMMKDQFGN 985
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 986 YVVQKVLETCDDQQRELILSRVKVHLSALKKYTYGKHIVARVEKLV 1031
>gi|255648502|gb|ACU24710.1| pumilo [Bombyx mori]
Length = 309
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 154/290 (53%), Gaps = 6/290 (2%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
LRDL +IV ++DQ+G R +Q+ + +E +M+F E+I LM D FGNYV+QK
Sbjct: 11 QLRDLANHIVEFSQDQHGSRFIQQKLERATVQEKQMVFNEIIGAAYSLMTDVFGNYVIQK 70
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E + EQ+T + + ++ + L +G R + K LE++ P+Q V+ L
Sbjct: 71 FFEFGTTEQKTTLAQKVRG---HVLNLALQMYGCRVIQKALESIP-PEQQQEVVRELDGH 126
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ ++++N A Y ++T GC V+Q +E+
Sbjct: 127 VLKCVKDQNGNHVVQKCIECVEPSALQFIINAFAGQVYALSTHPYGCRVIQRILEHCTPE 186
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ A+ L D YGNYVVQH+L + + L+ + G + S +K+ SN
Sbjct: 187 QTAPVLNELHAHTDQLITDQYGNYVVQHVLEHGAGEDRSRLVAAVRGKVLQLSQHKFASN 246
Query: 387 VVERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VVE+C+ + + +I EL + +++ F NYV+Q + V++
Sbjct: 247 VVEKCVTHATRNERALLIDELCGFNDNALHVMMKDQFANYVVQKMIDVAE 296
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 2/174 (1%)
Query: 257 SLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVL 316
+L L L V ++D +G IQ ++ + ++ + + NE+ Y + TD G V+
Sbjct: 9 NLQLRDLANHIVEFSQDQHGSRFIQQKLERATVQEKQMVFNEIIGAAYSLMTDVFGNYVI 68
Query: 317 QHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYV 376
Q E+ Q+ L ++ + L LA YG V+Q L P+ ++R+L+GH +
Sbjct: 69 QKFFEFGTTEQKTTLAQKVRGHVLNLALQMYGCRVIQKALESIPPEQQQEVVRELDGHVL 128
Query: 377 SFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
++ G++VV++C +E E + + II + V L HP+G VIQ L
Sbjct: 129 KCVKDQNGNHVVQKC-IECVEPSALQFIINAF-AGQVYALSTHPYGCRVIQRIL 180
>gi|340959315|gb|EGS20496.1| hypothetical protein CTHT_0023280 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 866
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 149/287 (51%), Gaps = 8/287 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+RG+IV + DQ G R +Q+ + + EE E IF E+ +LM D FGNYV+QK
Sbjct: 507 LKDIRGHIVEFSGDQDGSRFIQQKLLTANSEEKEWIFREIEPNAVQLMKDLFGNYVIQKF 566
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S +T++ + F L T+G R V K LE++ +Q LV L+P
Sbjct: 567 FEHGSMAHKTKLAQAMHGKMFDL---STQTYGCRVVQKALEHVLVEEQAVLV-KELQPEI 622
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ + K+ NG++V+Q + S + ++++ + +A+D C V+Q +E
Sbjct: 623 LKVIKNQNGNHVVQQIIAVVSRSEIDFIMDSMKGRISELASDAYACRVVQRVLERGTDDD 682
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ ++ E+ A A +L D YGNYV QH++ P+ + ++ + V S +K+ SNV
Sbjct: 683 KAFILKELHACAQMLVVDQYGNYVAQHVIQHGKPEDRSKMIEVVIPQVVGLSKHKFASNV 742
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVS----MLLMHPFGNYVIQSAL 430
VE C+ EQ I ++L + + L+ P+GNYVIQ L
Sbjct: 743 VETCIAHGTPEQQRAIRDQILPANDTQNSLLQLMKDPYGNYVIQKLL 789
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
++ L ++ + + D+ G +Q + + ++E + EI NA+ L +D +GNYV+
Sbjct: 504 RWELKDIRGHIVEFSGDQDGSRFIQQKLLTANSEEKEWIFREIEPNAVQLMKDLFGNYVI 563
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q L + + G S YG VV++ L E+ ++ EL P
Sbjct: 564 QKFFEHGSMAHKTKLAQAMHGKMFDLSTQTYGCRVVQKALEHVLVEEQAVLVKEL--QPE 621
Query: 413 VSMLLMHPFGNYVIQSALLV 432
+ ++ + GN+V+Q + V
Sbjct: 622 ILKVIKNQNGNHVVQQIIAV 641
>gi|410258978|gb|JAA17455.1| pumilio homolog 2 [Pan troglodytes]
gi|410298914|gb|JAA28057.1| pumilio homolog 2 [Pan troglodytes]
gi|410335701|gb|JAA36797.1| pumilio homolog 2 [Pan troglodytes]
Length = 1067
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 166/306 (54%), Gaps = 13/306 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 708 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 767
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 768 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 824
Query: 251 TNPQQ-ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATD 309
++ QQ IS ++ L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 825 SSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTH 884
Query: 310 KSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLR 369
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++
Sbjct: 885 PYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVS 944
Query: 370 QLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNY 424
++ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NY
Sbjct: 945 EIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANY 1004
Query: 425 VIQSAL 430
V+Q +
Sbjct: 1005 VVQKMI 1010
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 134/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ I + E
Sbjct: 778 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKE 837
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 838 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQ 892
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+
Sbjct: 893 RILEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVL 951
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLA 357
++ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++
Sbjct: 952 ALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMID 1011
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1012 MAEPAQRKIIMHKIRPHITTLRKYTYGKHILAK 1044
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 874 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 933
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 934 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 992
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 993 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1049
>gi|19074973|ref|NP_586479.1| RNA-BINDING PROTEIN OF THE PUMILIO FAMILY) [Encephalitozoon
cuniculi GB-M1]
gi|19069698|emb|CAD26083.1| RNA-BINDING PROTEIN OF THE PUMILIO FAMILY) [Encephalitozoon
cuniculi GB-M1]
Length = 530
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 163/286 (56%), Gaps = 17/286 (5%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
S++D+ V+++KDQ G R +QR M S+ + EI F ++D EL + FGNYV+QK
Sbjct: 217 SMKDI---CVSISKDQEGSRCIQRKMDSISRAEISWFFNNIVDAAPELSANLFGNYVIQK 273
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
++ L +EE+R R++ L Q+ + ++ +G R + KL++ ++ + +L +R
Sbjct: 274 IIPLLTEEERARLIAKLAK---QINLLSVHPYGCRVIQKLVDVSSD---VDFILEEVRDN 327
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ L +D NG++VIQ C++ +D +L + ++N +AT K GC V+Q +E+ +
Sbjct: 328 LLELIEDQNGNHVIQKCIEKC--KDRNIILQQFSENSLFLATHKYGCRVIQRMLEFCRED 385
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLAL-RVPQITASLLRQLEGHYVSFSCNKYGS 385
+ + +V +I+N L +D YGNYV+QH+LA+ + + + + +E Y C K+ S
Sbjct: 386 EIKNIVEVLISNIKTLVDDQYGNYVIQHILAVGKEDEKNLVIEKIIEKSYELSRC-KFSS 444
Query: 386 NVVERCLLESGEEQSTRIIIELLR----SPNVSMLLMHPFGNYVIQ 427
NVVE+C+ S Q R + + L P + + + +GNYV+Q
Sbjct: 445 NVVEQCVKLSNNGQRERFLAKFLEPVGSKPGMYSMCVDMYGNYVVQ 490
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 163 YGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLM 222
YGCR +Q+ + +++ I EV D + EL+ D GN+V+QK +E C + R IL
Sbjct: 302 YGCRVIQKLVDV--SSDVDFILEEVRDNLLELIEDQNGNHVIQKCIEKCKD--RNIILQQ 357
Query: 223 LTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQY 282
+ + L + +G R + ++LE +I ++ L TL D G+YVIQ+
Sbjct: 358 FSENSLFLA---THKYGCRVIQRMLE-FCREDEIKNIVEVLISNIKTLVDDQYGNYVIQH 413
Query: 283 CVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA----- 337
+ ++ ++ ++ + Y ++ K V++ CV+ S QRER +A+ +
Sbjct: 414 ILAVGKEDEKNLVIEKIIEKSYELSRCKFSSNVVEQCVKLSNNGQRERFLAKFLEPVGSK 473
Query: 338 -NALLLAEDCYGNYVVQHL 355
+ D YGNYVVQ L
Sbjct: 474 PGMYSMCVDMYGNYVVQRL 492
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 7/204 (3%)
Query: 231 VRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHE 290
V I + G R + + +++++ + IS + A L+ + G+YVIQ + + E
Sbjct: 223 VSISKDQEGSRCIQRKMDSISRAE-ISWFFNNIVDAAPELSANLFGNYVIQKIIPLLTEE 281
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ L+ ++A ++ GC V+Q V+ S + ++ E+ N L L ED GN+
Sbjct: 282 ERARLIAKLAKQINLLSVHPYGCRVIQKLVDVSSDV--DFILEEVRDNLLELIEDQNGNH 339
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
V+Q + + +L+Q + + + +KYG V++R +LE E + I+E+L S
Sbjct: 340 VIQK--CIEKCKDRNIILQQFSENSLFLATHKYGCRVIQR-MLEFCREDEIKNIVEVLIS 396
Query: 411 PNVSMLLMHPFGNYVIQSALLVSK 434
N+ L+ +GNYVIQ L V K
Sbjct: 397 -NIKTLVDDQYGNYVIQHILAVGK 419
>gi|41688714|sp|Q8TB72.2|PUM2_HUMAN RecName: Full=Pumilio homolog 2; Short=Pumilio-2
gi|119621229|gb|EAX00824.1| pumilio homolog 2 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 1066
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 166/306 (54%), Gaps = 13/306 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 707 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 766
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 767 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 823
Query: 251 TNPQQ-ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATD 309
++ QQ IS ++ L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 824 SSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTH 883
Query: 310 KSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLR 369
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++
Sbjct: 884 PYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVS 943
Query: 370 QLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNY 424
++ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NY
Sbjct: 944 EIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANY 1003
Query: 425 VIQSAL 430
V+Q +
Sbjct: 1004 VVQKMI 1009
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 134/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ I + E
Sbjct: 777 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKE 836
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 837 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQ 891
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+
Sbjct: 892 RILEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVL 950
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLA 357
++ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++
Sbjct: 951 ALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMID 1010
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1011 MAEPAQRKIIMHKIRPHITTLRKYTYGKHILAK 1043
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 873 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 932
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 933 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 991
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 992 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1048
>gi|255544718|ref|XP_002513420.1| conserved hypothetical protein [Ricinus communis]
gi|223547328|gb|EEF48823.1| conserved hypothetical protein [Ricinus communis]
Length = 483
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 156/289 (53%), Gaps = 11/289 (3%)
Query: 156 VALAKDQYGCRHLQRTM----SSLPKEEIEMIFVEVID--RVCELMIDPFGNYVVQKLVE 209
+ A Q G +HLQ + S + +E + V++ + LM+D +G +V KL++
Sbjct: 154 IMFASTQQGSKHLQDLLAYSNSDFASKLLETVTASVVEIPVINYLMVDQYGCHVCSKLID 213
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
C+++Q IL +T +D Q V+IC N +G + + KL++ + I + +L G
Sbjct: 214 SCNDKQLALILERITRNDEQFVQICCNINGSKMIKKLIKKVKRSCLICYMTVSLYKGFCQ 273
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
L + G YV+ +C+ + + L +C +ATD +GC + + ++ +G+ R+
Sbjct: 274 LAINQIGSYVVVFCMDCLDVKQSALLYEAAISHCLILATDATGCVSINNFIDRIQGSHRQ 333
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVE 389
L+ I NA+ L++D GN+VVQ +L L P I A + QL+GHY S K+GS+VVE
Sbjct: 334 TLLELISDNAVFLSQDPSGNHVVQKVLELENPIINAKIGAQLKGHYARLSFQKWGSHVVE 393
Query: 390 RCLLESGEEQSTRIIIELLR--SPNVSMLLMHPFGNYVIQSALLVSKVR 436
+CL+ + ++ +LL S +S + FGNYVIQ AL V+K +
Sbjct: 394 KCLV---SQPIVYVVQDLLTCGSSQLSQIARDQFGNYVIQKALKVTKKK 439
>gi|157132421|ref|XP_001656036.1| pumilio [Aedes aegypti]
gi|108871194|gb|EAT35419.1| AAEL012420-PA [Aedes aegypti]
Length = 796
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 154/289 (53%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +++F E++ LM D FGNYV+QK
Sbjct: 375 LRDLTNHIVEFSQDQHGSRFIQQKLERATAAEKQLVFNEILGAAYSLMTDVFGNYVIQKF 434
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ + + ++ + L +G R + K LE++ QQ +V L
Sbjct: 435 FEYGSPEQKQALAQQVKG---HVLPLALQMYGCRVIQKALESIPTEQQQEIVRE-LDGHV 490
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ +++++ + Y ++T GC V+Q +E+ Q
Sbjct: 491 LKCVKDQNGNHVVQKCIECVEPTALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHCTPEQ 550
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++AE+ AN L +D YGNYV+QH+L P+ + L+ + G + S +K+ SNV
Sbjct: 551 TSPILAELHANTEQLIQDQYGNYVIQHVLEHGKPEDKSVLIAAVRGKVLILSQHKFASNV 610
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ + +++ + NYV+Q + VS+
Sbjct: 611 VEKCVTHATRAERALLIEEVCSFNDAGLHVMMKDQYANYVVQKMIDVSE 659
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 130/248 (52%), Gaps = 12/248 (4%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ ++G+++ LA YGCR +Q+ + S+P E+ + I E+ V + + D GN+VVQK +
Sbjct: 448 QQVKGHVLPLALQMYGCRVIQKALESIPTEQQQEIVRELDGHVLKCVKDQNGNHVVQKCI 507
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C E + ++ D F+ L+TH G R + ++LE+ T P+Q S +LA L
Sbjct: 508 E-CVEPTALQFII----DAFRNQVYSLSTHPYGCRVIQRILEHCT-PEQTSPILAELHAN 561
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED L+ V ++ K V++ CV ++ A
Sbjct: 562 TEQLIQDQYGNYVIQHVLEHGKPEDKSVLIAAVRGKVLILSQHKFASNVVEKCVTHATRA 621
Query: 327 QRERLVAEII----ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+R L+ E+ A ++ +D Y NYVVQ ++ + P LL ++ H S
Sbjct: 622 ERALLIEEVCSFNDAGLHVMMKDQYANYVVQKMIDVSEPTQRKVLLHKIRPHMNSLKKYT 681
Query: 383 YGSNVVER 390
YG +++ +
Sbjct: 682 YGKHIIAK 689
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 94/186 (50%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + + + NE+ Y
Sbjct: 360 RLLEDFRNQRYPNLQLRDLTNHIVEFSQDQHGSRFIQQKLERATAAEKQLVFNEILGAAY 419
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q EY Q++ L ++ + L LA YG V+Q L +
Sbjct: 420 SLMTDVFGNYVIQKFFEYGSPEQKQALAQQVKGHVLPLALQMYGCRVIQKALESIPTEQQ 479
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E E + + II+ R+ V L HP+G
Sbjct: 480 QEIVRELDGHVLKCVKDQNGNHVVQKC-IECVEPTALQFIIDAFRN-QVYSLSTHPYGCR 537
Query: 425 VIQSAL 430
VIQ L
Sbjct: 538 VIQRIL 543
>gi|307210859|gb|EFN87212.1| Maternal protein pumilio [Harpegnathos saltator]
Length = 627
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 164/306 (53%), Gaps = 10/306 (3%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL +IV ++DQ+G R +Q+ + E +++F E++
Sbjct: 244 RSRLLEDFRNNRFPSLQLRDLANHIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILSS 303
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
LM D FGNYV+QK E + EQ++ + + ++ + L +G R + K LE++
Sbjct: 304 AYSLMTDVFGNYVIQKFFEYGTPEQKSTLAQKVRG---HVLPLALQMYGCRVIQKALESI 360
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
P+Q ++ L + KD NG++V+Q C++ ++++ + ++T
Sbjct: 361 -GPEQQQEIVRELDGHVLKCVKDQNGNHVVQKCIECVEPRALQFVIGAFTGQVFALSTHP 419
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q + ++ E+ A+ L +D YGNYV+QH+L P+ A L+
Sbjct: 420 YGCRVIQRILEHCTPEQTQGILQELHASTDQLIQDQYGNYVIQHVLEHGKPEDKAQLISS 479
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQS 428
+ G ++ S +K+ SNVVE+C+ + ++ +I E+ +++++ + NYV+Q
Sbjct: 480 VRGKVLALSQHKFASNVVEKCVTHATRQERAILIEEVCGFNDNALNVMMKDQYANYVVQK 539
Query: 429 ALLVSK 434
+ V++
Sbjct: 540 MIDVAE 545
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 124/246 (50%), Gaps = 12/246 (4%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ +RG+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +
Sbjct: 334 QKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVRELDGHVLKCVKDQNGNHVVQKCI 393
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E ++ T F L+TH G R + ++LE+ T P+Q +L L
Sbjct: 394 ECVEPRALQFVIGAFTGQVF-----ALSTHPYGCRVIQRILEHCT-PEQTQGILQELHAS 447
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED L++ V ++ K V++ CV ++
Sbjct: 448 TDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLALSQHKFASNVVEKCVTHATRQ 507
Query: 327 QRERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+R L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H S
Sbjct: 508 ERAILIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKVLMHKIRPHLGSLRKYT 567
Query: 383 YGSNVV 388
YG +++
Sbjct: 568 YGKHII 573
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 63/140 (45%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L++L + L +DQYG +Q + E+ + V +V L F + VV+K
Sbjct: 441 LQELHASTDQLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLALSQHKFASNVVEKC 500
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + ++R ++ + + + + + V++ + ++ P Q +++ +RP
Sbjct: 501 VTHATRQERAILIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKVLMHKIRPHL 560
Query: 268 VTLTKDTNGHYVIQYCVKHF 287
+L K T G ++I K F
Sbjct: 561 GSLRKYTYGKHIIVKLEKFF 580
>gi|355565487|gb|EHH21916.1| hypothetical protein EGK_05087 [Macaca mulatta]
gi|355751134|gb|EHH55389.1| hypothetical protein EGM_04593 [Macaca fascicularis]
gi|380811082|gb|AFE77416.1| pumilio homolog 2 [Macaca mulatta]
gi|383417011|gb|AFH31719.1| pumilio homolog 2 [Macaca mulatta]
Length = 1067
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 166/306 (54%), Gaps = 13/306 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 708 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 767
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 768 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 824
Query: 251 TNPQQ-ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATD 309
++ QQ IS ++ L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 825 SSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTH 884
Query: 310 KSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLR 369
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++
Sbjct: 885 PYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVS 944
Query: 370 QLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNY 424
++ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NY
Sbjct: 945 EIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANY 1004
Query: 425 VIQSAL 430
V+Q +
Sbjct: 1005 VVQKMI 1010
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 134/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ I + E
Sbjct: 778 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKE 837
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 838 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQ 892
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+
Sbjct: 893 RILEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVL 951
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLA 357
++ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++
Sbjct: 952 ALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMID 1011
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1012 MAEPAQRKIIMHKIRPHITTLRKYTYGKHILAK 1044
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 874 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 933
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 934 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 992
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 993 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1049
>gi|354479902|ref|XP_003502148.1| PREDICTED: pumilio homolog 2 isoform 1 [Cricetulus griseus]
Length = 1065
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 708 RSRLLEDFRNNRFPNLQLRDLMGHIVEFSQDQHGSRFIQQKLERATPAERQMVFSEILQA 767
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 768 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 824
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 825 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 883
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 884 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 943
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 944 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 1003
Query: 426 IQSAL 430
+Q +
Sbjct: 1004 VQKMI 1008
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 800 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 858
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 859 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 913
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 914 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 973
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 974 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 1033
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1034 TYGKHILAK 1042
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 872 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 931
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 932 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 990
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 991 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1047
>gi|281344230|gb|EFB19814.1| hypothetical protein PANDA_002991 [Ailuropoda melanoleuca]
Length = 1049
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 166/306 (54%), Gaps = 13/306 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 690 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 749
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 750 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 806
Query: 251 TNPQQ-ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATD 309
++ QQ IS ++ L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 807 SSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTH 866
Query: 310 KSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLR 369
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++
Sbjct: 867 PYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVS 926
Query: 370 QLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNY 424
++ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NY
Sbjct: 927 EIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANY 986
Query: 425 VIQSAL 430
V+Q +
Sbjct: 987 VVQKMI 992
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 127/251 (50%), Gaps = 17/251 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+RG+++ LA YGCR +Q+ + S+ ++ I + E+ V + + D GN+VVQK +
Sbjct: 782 IRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCI 841
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 842 E-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQH 895
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A
Sbjct: 896 TEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRA 955
Query: 327 QRERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFS 379
+R L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 956 ERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLR 1015
Query: 380 CNKYGSNVVER 390
YG +++ +
Sbjct: 1016 KYTYGKHILAK 1026
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 856 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 915
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 916 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 974
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 975 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1031
>gi|384245702|gb|EIE19195.1| ARM repeat-containing protein [Coccomyxa subellipsoidea C-169]
Length = 945
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/379 (30%), Positives = 180/379 (47%), Gaps = 60/379 (15%)
Query: 113 RSNGNELSSVPRNQWMSSLSL-------KRNQWLQDSFDCSSLRDLRGNIVALAKDQYGC 165
R+ NE S V +N+ S S+ + NQ+ L+D+ G++ L +DQ+G
Sbjct: 445 RTRSNEDSKV-QNEAGGSASILEAIKTNRGNQYY--------LKDIAGHVYDLCRDQFGS 495
Query: 166 RHLQRTMSSLPKEEIEMIFVEVI---DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLM 222
R +Q + + EE+ F EV D +LM D FGNYVVQK ++ ++Q+ + +
Sbjct: 496 RFIQMKIETASPEEVAAAFTEVCVNKDPALQLMNDVFGNYVVQKFLDFGDDDQKEVMAAL 555
Query: 223 LTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQY 282
+ + + L +G R + K +E L P + S+V A L+ + D NG++VIQ
Sbjct: 556 IQG---HVKTLSLQVYGCRVIQKAIEVLRPPLKDSIV-AELKGHVIECISDQNGNHVIQK 611
Query: 283 CVKHFS-HEDTKYLLNEVADNCYGIATDKS------------------------GCCVLQ 317
C++ + E LL E+AD G A + GC V+Q
Sbjct: 612 CIECITPSEPIADLLEELADGPEGAAAAQRSRAPLPPGKPALSAGFVPLARHPYGCRVVQ 671
Query: 318 HCVEY-SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYV 376
+E + + RLVA + NAL LA D YGNYV+QH LA P+ ++++L+ H V
Sbjct: 672 RILEKCTLEDYKHRLVATVTENALDLARDTYGNYVIQHSLAFGSPEEKVEIIQRLQAHIV 731
Query: 377 SFSCNKYGSNVVERCLLESGEEQSTRIIIEL------LRSPNVSMLLM----HPFGNYVI 426
S +K+ SNVVE+CL +Q R++ + L S LL +GNYV+
Sbjct: 732 ELSTHKFASNVVEKCLEFGTRDQRRRLVSTMLGEGSGLDSAGADQLLQTMTKDQYGNYVV 791
Query: 427 QSAL-LVSKVRLFSSPPIS 444
Q L + L +PP S
Sbjct: 792 QKTLESIKPFDLIWAPPDS 810
>gi|344252117|gb|EGW08221.1| Pumilio-like 2 [Cricetulus griseus]
Length = 1064
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 707 RSRLLEDFRNNRFPNLQLRDLMGHIVEFSQDQHGSRFIQQKLERATPAERQMVFSEILQA 766
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 767 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 823
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 824 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 882
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 883 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 942
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 943 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 1002
Query: 426 IQSAL 430
+Q +
Sbjct: 1003 VQKMI 1007
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 799 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 857
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 858 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 912
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 913 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 972
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 973 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 1032
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1033 TYGKHILAK 1041
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 871 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 930
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 931 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 989
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 990 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1046
>gi|33589344|gb|AAQ22439.1| RE63138p [Drosophila melanogaster]
Length = 1533
Score = 150 bits (379), Expect = 1e-33, Method: Composition-based stats.
Identities = 86/289 (29%), Positives = 153/289 (52%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK
Sbjct: 1109 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 1168
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+ + + + QL L +G R + K LE+++ P+Q ++ L
Sbjct: 1169 FEFGTPEQKNTLGMQVKGHVLQLA---LQMYGCRVIQKALESIS-PEQQQEIVHELDGHV 1224
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++N Y ++T GC V+Q +E+ Q
Sbjct: 1225 LKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQ 1284
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L + + L+ + G + S +K+ SNV
Sbjct: 1285 TTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNV 1344
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + T +I E+ + M++ + NYV+Q + VS+
Sbjct: 1345 VEKCVTHATRGERTGLIDEVCTFNDNALHMMMKDQYANYVVQKMIDVSE 1393
Score = 102 bits (254), Expect = 4e-19, Method: Composition-based stats.
Identities = 70/243 (28%), Positives = 125/243 (51%), Gaps = 12/243 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +E
Sbjct: 1184 VKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIE- 1242
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + + L + F+ L+TH G R + ++LE+ T +Q + +L L
Sbjct: 1243 CVDP----VALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCT-AEQTTPILDELHEHTE 1297
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED L+N V ++ K V++ CV ++ +R
Sbjct: 1298 QLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGER 1357
Query: 329 ERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H + YG
Sbjct: 1358 TGLIDEVCTFNDNALHMMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYG 1417
Query: 385 SNV 387
++
Sbjct: 1418 KHI 1420
Score = 69.7 bits (169), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + + + +E+ Y
Sbjct: 1094 RLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAY 1153
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q+ L ++ + L LA YG V+Q L P+
Sbjct: 1154 SLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQ 1213
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++ +L+GH + ++ G++VV++C +E + + + II + V L HP+G
Sbjct: 1214 QEIVHELDGHVLKCVKDQNGNHVVQKC-IECVDPVALQFIINAFKG-QVYSLSTHPYGCR 1271
Query: 425 VIQSAL 430
VIQ L
Sbjct: 1272 VIQRIL 1277
>gi|449019193|dbj|BAM82595.1| similar to translational repressor pumilio [Cyanidioschyzon merolae
strain 10D]
Length = 1506
Score = 150 bits (379), Expect = 1e-33, Method: Composition-based stats.
Identities = 101/317 (31%), Positives = 162/317 (51%), Gaps = 29/317 (9%)
Query: 141 DSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFG 200
++F L D+RG IV + DQ+G R +Q + + +++ + EV+ + L+ D FG
Sbjct: 1017 EAFTSWKLEDIRGQIVEFSTDQHGSRFIQTKLETATPDQVGWVLQEVLAEMNRLVTDVFG 1076
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVL 260
NYVVQKL+E + I + L N +++ + L+ +G RAV K LE L Q LV+
Sbjct: 1077 NYVVQKLLEHGTARDLQAIAMKLKN---RILALSLHMYGCRAVQKALEVLPASTQAELVI 1133
Query: 261 AALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCV 320
L + +D NG++VIQ C++ + +++++ V +A GC V+Q +
Sbjct: 1134 E-LDGHVLKCIRDQNGNHVIQKCIERVPGQHVQFIVDAVRGQAVSLAEHSYGCRVIQRIL 1192
Query: 321 EYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSC 380
EYS Q+ ++ EI+ L D YGNYV+QH++ + A +LR + +S S
Sbjct: 1193 EYSPEEQKVPIMREIMQACRTLIRDQYGNYVIQHVVEHGKEEERAHILRMVRDQCISMSQ 1252
Query: 381 NKYGSNVVERCLLESGEEQSTRIIIELL--RS------------------PNVSM----L 416
+KY SNVVERC L+ G + +I++L RS P S+ L
Sbjct: 1253 HKYASNVVERC-LQHGSPADRKALIDILLGRSDVAGSGSGGGGSSGATALPRNSVPLIDL 1311
Query: 417 LMHPFGNYVIQSALLVS 433
+ FGNYV+Q L V+
Sbjct: 1312 VQDQFGNYVVQRVLDVA 1328
Score = 58.5 bits (140), Expect = 7e-06, Method: Composition-based stats.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG V+LA+ YGCR +QR + P+E+ I E++ L+ D +GNYV+Q +VE
Sbjct: 1171 VRGQAVSLAEHSYGCRVIQRILEYSPEEQKVPIMREIMQACRTLIRDQYGNYVIQHVVEH 1230
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
EE+R IL M+ + Q + + + + V + L++ + + +L+ L V
Sbjct: 1231 GKEEERAHILRMVRD---QCISMSQHKYASNVVERCLQHGSPADRKALIDILLGRSDVAG 1287
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+ G S T N V + D+ G V+Q ++ + QR++
Sbjct: 1288 SGSGGGG----------SSGATALPRNSVP--LIDLVQDQFGNYVVQRVLDVAGDEQRQQ 1335
Query: 331 LVAEIIANALLLAEDCYGNYVVQHL 355
+ AN ++ YG +++ L
Sbjct: 1336 AAELLRANLNVIKRFSYGKHILARL 1360
>gi|440906069|gb|ELR56374.1| Pumilio-like protein 2 [Bos grunniens mutus]
Length = 1066
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 166/306 (54%), Gaps = 13/306 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 707 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 766
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 767 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 823
Query: 251 TNPQQ-ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATD 309
++ QQ IS ++ L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 824 SSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTH 883
Query: 310 KSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLR 369
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++
Sbjct: 884 PYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVS 943
Query: 370 QLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNY 424
++ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NY
Sbjct: 944 EIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANY 1003
Query: 425 VIQSAL 430
V+Q +
Sbjct: 1004 VVQKMI 1009
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 127/251 (50%), Gaps = 17/251 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+RG+++ LA YGCR +Q+ + S+ ++ I + E+ V + + D GN+VVQK +
Sbjct: 799 IRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCI 858
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 859 E-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQH 912
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A
Sbjct: 913 TEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRA 972
Query: 327 QRERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFS 379
+R L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 973 ERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHISTLR 1032
Query: 380 CNKYGSNVVER 390
YG +++ +
Sbjct: 1033 KYTYGKHILAK 1043
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 873 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 932
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 933 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 991
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 992 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHISTLRKYTYGKHILAKLEKYY 1048
>gi|326521732|dbj|BAK00442.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 824
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 156/304 (51%), Gaps = 19/304 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G IV + DQ+G R +Q+ + + EE ++F EV+ LM D FGNYV+QK
Sbjct: 493 LSDITGRIVDFSADQHGSRFIQQKLENCTAEEKAVVFAEVLPHASSLMTDVFGNYVIQKF 552
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQR + L +V + L +G R + K LE + Q+I LV L
Sbjct: 553 FEHGTPEQRRDLAAKLAG---HVVPLSLQMYGCRVIQKALEVMELDQKIDLV-RELDGNI 608
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ C++ E ++++ ++ GC V+Q +E+ G
Sbjct: 609 MRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDS 668
Query: 328 RER-LVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
R + ++ EI+ +A +LA+D YGNYV QH++ A ++ +L G V+ S NK+ SN
Sbjct: 669 RGQCIIDEILQSACILAQDQYGNYVTQHVVEKGKSHERAQIISKLAGQVVTMSQNKFASN 728
Query: 387 VVERCLLESGEEQSTRIIIELLRSP--NVSMLLM--HPFGNYVIQS----------ALLV 432
V+E+C + +I E++ N ++L M + NYV+Q LLV
Sbjct: 729 VIEKCFQHGDIAERDLLIREIVEQTDGNDTLLAMMKDQYANYVVQKILETCNDEQRELLV 788
Query: 433 SKVR 436
S+V+
Sbjct: 789 SRVK 792
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 124/253 (49%), Gaps = 9/253 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G++V L+ YGCR +Q+ + + ++ + E+ + + D GN+V+QK +E
Sbjct: 568 LAGHVVPLSLQMYGCRVIQKALEVMELDQKIDLVRELDGNIMRCVRDQNGNHVIQKCIEC 627
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E I +++ Q+ + ++ +G R + ++LE+ + ++ + A L
Sbjct: 628 VPTE---HIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSRGQCIIDEILQSACIL 684
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YV Q+ V+ + +++++A ++ +K V++ C ++ A+R+
Sbjct: 685 AQDQYGNYVTQHVVEKGKSHERAQIISKLAGQVVTMSQNKFASNVIEKCFQHGDIAERDL 744
Query: 331 LVAEII----ANALLLA--EDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ EI+ N LLA +D Y NYVVQ +L + L+ +++GH + YG
Sbjct: 745 LIREIVEQTDGNDTLLAMMKDQYANYVVQKILETCNDEQRELLVSRVKGHLQALRKYTYG 804
Query: 385 SNVVERCLLESGE 397
++ R GE
Sbjct: 805 KHIASRVEQLCGE 817
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 109/229 (47%), Gaps = 7/229 (3%)
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L EL S R L +T ++V + HG R + + LEN T ++ ++V A + P
Sbjct: 480 LEELKSNRARRVELSDITG---RIVDFSADQHGSRFIQQKLENCTA-EEKAVVFAEVLPH 535
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
A +L D G+YVIQ +H + E + L ++A + ++ GC V+Q +E +
Sbjct: 536 ASSLMTDVFGNYVIQKFFEHGTPEQRRDLAAKLAGHVVPLSLQMYGCRVIQKALEVMELD 595
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q+ LV E+ N + D GN+V+Q + + ++ G S S + YG
Sbjct: 596 QKIDLVRELDGNIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCR 655
Query: 387 VVERCLLESGEEQSTRIII-ELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
V++R L G + + II E+L+S +L +GNYV Q + K
Sbjct: 656 VIQRVLEHCGGDSRGQCIIDEILQS--ACILAQDQYGNYVTQHVVEKGK 702
>gi|158828184|gb|ABW81063.1| Mpt5-1 [Arabidopsis lyrata subsp. lyrata]
Length = 969
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 156/288 (54%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G++V + DQYG R +Q+ + + +E M++ E++ LM D FGNYV+QK
Sbjct: 629 LSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPHAHALMTDVFGNYVIQKF 688
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E QR + L ++ ++ + L +G R + K +E + Q+I +V L
Sbjct: 689 FEHGLPPQRRELAEKLFDN---VLPLSLQMYGCRVIQKAIEVVDLDQKIKMV-KELDGHV 744
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++V+Q C++ E+ +++++ + ++T GC V+Q +E+
Sbjct: 745 MRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPD 804
Query: 328 RE-RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ +++ EI++ +LA+D YGNYVVQH+L P ++++L G V S K+ SN
Sbjct: 805 TQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASN 864
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL G E+ ++ E+L + + + ++ F NYV+Q L
Sbjct: 865 VVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL 912
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
+LE + + L+ + V + D G IQ ++ + ++ + E+ + +
Sbjct: 615 MLEEFKSNKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPHAHA 674
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ QR L ++ N L L+ YG V+Q + +
Sbjct: 675 LMTDVFGNYVIQKFFEHGLPPQRRELAEKLFDNVLPLSLQMYGCRVIQKAIEVVDLDQKI 734
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++++L+GH + ++ G++VV++C +E E++ II +V L HP+G V
Sbjct: 735 KMVKELDGHVMRCVRDQNGNHVVQKC-IECVPEENIEFIISTFFG-HVVTLSTHPYGCRV 792
Query: 426 IQSAL 430
IQ L
Sbjct: 793 IQRVL 797
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 15/122 (12%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L G IV +++ ++ +++ ++ EE E++ E++ E +M D F N
Sbjct: 846 IKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFAN 905
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKL---------LENLTN 252
YVVQK++E C ++QR IL + L + H + + KL L++LT
Sbjct: 906 YVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHVVARIEKLVAAGERRMALQSLTQ 965
Query: 253 PQ 254
PQ
Sbjct: 966 PQ 967
>gi|297826303|ref|XP_002881034.1| mpt5-1 [Arabidopsis lyrata subsp. lyrata]
gi|297326873|gb|EFH57293.1| mpt5-1 [Arabidopsis lyrata subsp. lyrata]
Length = 969
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 156/288 (54%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G++V + DQYG R +Q+ + + +E M++ E++ LM D FGNYV+QK
Sbjct: 629 LSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPHAHALMTDVFGNYVIQKF 688
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E QR + L ++ ++ + L +G R + K +E + Q+I +V L
Sbjct: 689 FEHGLPPQRRELAEKLFDN---VLPLSLQMYGCRVIQKAIEVVDLDQKIKMV-KELDGHV 744
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++V+Q C++ E+ +++++ + ++T GC V+Q +E+
Sbjct: 745 MRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPD 804
Query: 328 RE-RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ +++ EI++ +LA+D YGNYVVQH+L P ++++L G V S K+ SN
Sbjct: 805 TQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASN 864
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL G E+ ++ E+L + + + ++ F NYV+Q L
Sbjct: 865 VVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL 912
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
+LE + + L+ + V + D G IQ ++ + ++ + E+ + +
Sbjct: 615 MLEEFKSNKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPHAHA 674
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ QR L ++ N L L+ YG V+Q + +
Sbjct: 675 LMTDVFGNYVIQKFFEHGLPPQRRELAEKLFDNVLPLSLQMYGCRVIQKAIEVVDLDQKI 734
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++++L+GH + ++ G++VV++C +E E++ II +V L HP+G V
Sbjct: 735 KMVKELDGHVMRCVRDQNGNHVVQKC-IECVPEENIEFIISTFFG-HVVTLSTHPYGCRV 792
Query: 426 IQSAL 430
IQ L
Sbjct: 793 IQRVL 797
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 15/122 (12%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L G IV +++ ++ +++ ++ EE E++ E++ E +M D F N
Sbjct: 846 IKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFAN 905
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKL---------LENLTN 252
YVVQK++E C ++QR IL + L + H + + KL L++LT
Sbjct: 906 YVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHVVARIEKLVAAGERRMALQSLTQ 965
Query: 253 PQ 254
PQ
Sbjct: 966 PQ 967
>gi|15227052|ref|NP_180483.1| pumilio 1 [Arabidopsis thaliana]
gi|75217076|sp|Q9ZW07.1|PUM1_ARATH RecName: Full=Pumilio homolog 1; Short=APUM-1; Short=AtPUM1
gi|3980412|gb|AAC95215.1| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis
thaliana]
gi|330253128|gb|AEC08222.1| pumilio 1 [Arabidopsis thaliana]
Length = 968
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 156/288 (54%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G++V + DQYG R +Q+ + + +E M++ E++ + LM D FGNYV+QK
Sbjct: 628 LSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALVLMTDVFGNYVIQKF 687
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E QR + L + ++ + L +G R + K +E + Q+I +V L
Sbjct: 688 FEHGLPPQRRELAEKLFD---HVLPLSLQMYGCRVIQKAIEVVDLDQKIKMV-KELDGHV 743
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++V+Q C++ E+ +++++ + ++T GC V+Q +E+
Sbjct: 744 MRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPD 803
Query: 328 RE-RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ +++ EI++ +LA+D YGNYVVQH+L P ++++L G V S K+ SN
Sbjct: 804 TQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASN 863
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL G E+ ++ E+L + + + ++ F NYV+Q L
Sbjct: 864 VVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL 911
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S++ + L+E+A + ++D+ G +Q +E + ++ + EI+ AL+L D +
Sbjct: 620 SNKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALVLMTDVF 679
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYV+Q +P L +L H + S YG V+++ + +Q +++ EL
Sbjct: 680 GNYVIQKFFEHGLPPQRRELAEKLFDHVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKEL 739
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
+V + GN+V+Q +
Sbjct: 740 --DGHVMRCVRDQNGNHVVQKCI 760
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
+LE + + L+ + V + D G IQ ++ + ++ + E+
Sbjct: 614 MLEEFKSNKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALV 673
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ QR L ++ + L L+ YG V+Q + +
Sbjct: 674 LMTDVFGNYVIQKFFEHGLPPQRRELAEKLFDHVLPLSLQMYGCRVIQKAIEVVDLDQKI 733
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++++L+GH + ++ G++VV++C +E E++ II +V L HP+G V
Sbjct: 734 KMVKELDGHVMRCVRDQNGNHVVQKC-IECVPEENIEFIISTFFG-HVVTLSTHPYGCRV 791
Query: 426 IQSAL 430
IQ L
Sbjct: 792 IQRVL 796
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 15/122 (12%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L G IV +++ ++ +++ ++ EE E++ E++ E +M D F N
Sbjct: 845 IKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFAN 904
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKL---------LENLTN 252
YVVQK++E C ++QR IL + L + H + + KL L++LT
Sbjct: 905 YVVQKVLETCDDQQRELILTRIKVHLTALKKYTYGKHVVARIEKLVAAGERRMALQSLTQ 964
Query: 253 PQ 254
PQ
Sbjct: 965 PQ 966
>gi|270016510|gb|EFA12956.1| pumilio [Tribolium castaneum]
Length = 1102
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 155/289 (53%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK
Sbjct: 758 LRDLANHIVEFSQDQHGSRFIQQKLERASATEKQMVFNEILSAAYNLMTDVFGNYVIQKF 817
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+T + + ++ + L +G R + K LE++ P+Q ++ L
Sbjct: 818 FEFGTAEQKTTLAQKVRG---HVLPLALQMYGCRVIQKALESIP-PEQQQEIVRELDGHV 873
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++ + Y ++T GC V+Q +E+ Q
Sbjct: 874 LKCVKDQNGNHVVQKCIECVDPNALQFIIQSFSGQVYTLSTHPYGCRVIQRILEHCTPEQ 933
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++AE+ + L +D +GNYV+QH+L P+ + L+ + G ++ S +K+ SNV
Sbjct: 934 TAPILAELHQHTDQLIQDQFGNYVIQHVLEHGKPEDKSQLISSVRGKVLALSQHKFASNV 993
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ + +++ + NYV+Q + VS+
Sbjct: 994 VEKCVTHATRAERALLIEEVCGFNDNALHVMMKDQYANYVVQKMIDVSE 1042
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 129/246 (52%), Gaps = 8/246 (3%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ +RG+++ LA YGCR +Q+ + S+P E+ + I E+ V + + D GN+VVQK +
Sbjct: 831 QKVRGHVLPLALQMYGCRVIQKALESIPPEQQQEIVRELDGHVLKCVKDQNGNHVVQKCI 890
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
E I+ + Q+ + + +G R + ++LE+ T P+Q + +LA L
Sbjct: 891 ECVDPNALQFIIQSFSG---QVYTLSTHPYGCRVIQRILEHCT-PEQTAPILAELHQHTD 946
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED L++ V ++ K V++ CV ++ A+R
Sbjct: 947 QLIQDQFGNYVIQHVLEHGKPEDKSQLISSVRGKVLALSQHKFASNVVEKCVTHATRAER 1006
Query: 329 ERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H S YG
Sbjct: 1007 ALLIEEVCGFNDNALHVMMKDQYANYVVQKMIDVSEPTQRKVLMHKIRPHLNSLRKYTYG 1066
Query: 385 SNVVER 390
+++ +
Sbjct: 1067 KHIIAK 1072
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 8/220 (3%)
Query: 217 TRILLMLTNDDFQLVRICLNT------HGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
T + TN F + L+T G + +LLE+ N + +L L L V
Sbjct: 709 TNAMFGSTNSLFTKINSSLSTVPSSLDKGQQGRSRLLEDFRNNRYPNLQLRDLANHIVEF 768
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
++D +G IQ ++ S + + + NE+ Y + TD G V+Q E+ Q+
Sbjct: 769 SQDQHGSRFIQQKLERASATEKQMVFNEILSAAYNLMTDVFGNYVIQKFFEFGTAEQKTT 828
Query: 331 LVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
L ++ + L LA YG V+Q L P+ ++R+L+GH + ++ G++VV++
Sbjct: 829 LAQKVRGHVLPLALQMYGCRVIQKALESIPPEQQQEIVRELDGHVLKCVKDQNGNHVVQK 888
Query: 391 CLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
C +E + + + II+ S V L HP+G VIQ L
Sbjct: 889 C-IECVDPNALQFIIQSF-SGQVYTLSTHPYGCRVIQRIL 926
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/176 (19%), Positives = 68/176 (38%), Gaps = 36/176 (20%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYV---- 203
++ G + L+ YGCR +QR + E+ I E+ +L+ D FGNYV
Sbjct: 902 IQSFSGQVYTLSTHPYGCRVIQRILEHCTPEQTAPILAELHQHTDQLIQDQFGNYVIQHV 961
Query: 204 --------------------------------VQKLVELCSEEQRTRILLMLTNDDFQLV 231
V+K V + +R ++ + + +
Sbjct: 962 LEHGKPEDKSQLISSVRGKVLALSQHKFASNVVEKCVTHATRAERALLIEEVCGFNDNAL 1021
Query: 232 RICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
+ + V++ + +++ P Q +++ +RP +L K T G ++I K+F
Sbjct: 1022 HVMMKDQYANYVVQKMIDVSEPTQRKVLMHKIRPHLNSLRKYTYGKHIIAKLEKYF 1077
>gi|326506354|dbj|BAJ86495.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 844
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 155/304 (50%), Gaps = 19/304 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G IV + DQ+G R +Q+ + + EE +F EV+ LM D FGNYV+QK
Sbjct: 513 LSDITGRIVDFSADQHGSRFIQQKLENCTAEEKAAVFAEVLPHASSLMTDVFGNYVIQKF 572
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQR + L +V + L +G R + K LE + Q+I LV L
Sbjct: 573 FEHGTPEQRRDLAAKLAG---HVVPLSLQMYGCRVIQKALEVMELDQKIDLV-RELDGNI 628
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ C++ E ++++ ++ GC V+Q +E+ G
Sbjct: 629 MRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDS 688
Query: 328 RER-LVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
R + ++ EI+ +A +LA+D YGNYV QH++ A ++ +L G V+ S NK+ SN
Sbjct: 689 RGQCIIDEILQSACILAQDQYGNYVTQHVVEKGKSHERAQIISKLAGQVVTMSQNKFASN 748
Query: 387 VVERCLLESGEEQSTRIIIELLRSP--NVSMLLM--HPFGNYVIQS----------ALLV 432
V+E+C + +I E++ N ++L M + NYV+Q LLV
Sbjct: 749 VIEKCFQHGDIAERDLLIREIVEQTDGNDTLLAMMKDQYANYVVQKILETCNDEQRELLV 808
Query: 433 SKVR 436
S+V+
Sbjct: 809 SRVK 812
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 124/253 (49%), Gaps = 9/253 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G++V L+ YGCR +Q+ + + ++ + E+ + + D GN+V+QK +E
Sbjct: 588 LAGHVVPLSLQMYGCRVIQKALEVMELDQKIDLVRELDGNIMRCVRDQNGNHVIQKCIEC 647
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E I +++ Q+ + ++ +G R + ++LE+ + ++ + A L
Sbjct: 648 VPTE---HIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSRGQCIIDEILQSACIL 704
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YV Q+ V+ + +++++A ++ +K V++ C ++ A+R+
Sbjct: 705 AQDQYGNYVTQHVVEKGKSHERAQIISKLAGQVVTMSQNKFASNVIEKCFQHGDIAERDL 764
Query: 331 LVAEII----ANALLLA--EDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ EI+ N LLA +D Y NYVVQ +L + L+ +++GH + YG
Sbjct: 765 LIREIVEQTDGNDTLLAMMKDQYANYVVQKILETCNDEQRELLVSRVKGHLQALRKYTYG 824
Query: 385 SNVVERCLLESGE 397
++ R GE
Sbjct: 825 KHIASRVEQLCGE 837
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 7/229 (3%)
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L EL S R L +T ++V + HG R + + LEN T ++ + V A + P
Sbjct: 500 LEELKSNRARRVELSDITG---RIVDFSADQHGSRFIQQKLENCTA-EEKAAVFAEVLPH 555
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
A +L D G+YVIQ +H + E + L ++A + ++ GC V+Q +E +
Sbjct: 556 ASSLMTDVFGNYVIQKFFEHGTPEQRRDLAAKLAGHVVPLSLQMYGCRVIQKALEVMELD 615
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q+ LV E+ N + D GN+V+Q + + ++ G S S + YG
Sbjct: 616 QKIDLVRELDGNIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCR 675
Query: 387 VVERCLLESGEEQSTRIII-ELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
V++R L G + + II E+L+S +L +GNYV Q + K
Sbjct: 676 VIQRVLEHCGGDSRGQCIIDEILQS--ACILAQDQYGNYVTQHVVEKGK 722
>gi|164658049|ref|XP_001730150.1| hypothetical protein MGL_2532 [Malassezia globosa CBS 7966]
gi|159104045|gb|EDP42936.1| hypothetical protein MGL_2532 [Malassezia globosa CBS 7966]
Length = 447
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 114/193 (59%)
Query: 238 HGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLN 297
HG RAV K ++ ++ P Q ++ A VTL KD NG++VIQ C+ D +++ +
Sbjct: 2 HGTRAVQKTIDFISTPAQTQAIIDAFARNVVTLIKDLNGNHVIQKCLNRLPAGDNQFIYD 61
Query: 298 EVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLA 357
VA C +AT + GCCVLQ C++++ +QR++LV EI +L L +D +GNYVVQ++L
Sbjct: 62 AVAAQCVDVATHRHGCCVLQRCIDHASESQRQQLVNEITMYSLTLVQDPFGNYVVQYVLD 121
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLL 417
L P T S+ Q GH S K+ SNV+E+C+ + +++ EL+ + +LL
Sbjct: 122 LNDPVSTESVTNQFLGHVFQLSTQKFSSNVIEKCIRVAEPPLRHKLVAELVDPSRLELLL 181
Query: 418 MHPFGNYVIQSAL 430
F NYV+Q+ L
Sbjct: 182 RDSFANYVVQTCL 194
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 8/251 (3%)
Query: 163 YGCRHLQRTMSSLPKEEIEMIFVEVIDR-VCELMIDPFGNYVVQKLVELCSEEQRTRILL 221
+G R +Q+T+ + ++ R V L+ D GN+V+QK + I
Sbjct: 2 HGTRAVQKTIDFISTPAQTQAIIDAFARNVVTLIKDLNGNHVIQKCLNRLPAGDNQFIYD 61
Query: 222 MLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQ 281
+ Q V + + HG + + +++ + Q+ LV + ++TL +D G+YV+Q
Sbjct: 62 AVA---AQCVDVATHRHGCCVLQRCIDHASESQRQQLV-NEITMYSLTLVQDPFGNYVVQ 117
Query: 282 YCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEII--ANA 339
Y + T+ + N+ + + ++T K V++ C+ ++ R +LVAE++ +
Sbjct: 118 YVLDLNDPVSTESVTNQFLGHVFQLSTQKFSSNVIEKCIRVAEPPLRHKLVAELVDPSRL 177
Query: 340 LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQ 399
LL D + NYVVQ L P L+ + S YG + + L G E
Sbjct: 178 ELLLRDSFANYVVQTCLDYAEPAQRTHLVECIRPILPSIRNTPYGKRIQSK-LQRDGSEP 236
Query: 400 STRIIIELLRS 410
S E RS
Sbjct: 237 SRHRRSEQSRS 247
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 12/160 (7%)
Query: 128 MSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEV 187
++ L NQ++ D+ + V +A ++GC LQR + + + + + E+
Sbjct: 48 LNRLPAGDNQFIYDA--------VAAQCVDVATHRHGCCVLQRCIDHASESQRQQLVNEI 99
Query: 188 IDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
L+ DPFGNYVVQ +++L + FQL +++ I +++
Sbjct: 100 TMYSLTLVQDPFGNYVVQYVLDLNDPVSTESVTNQFLGHVFQLSTQKFSSNVIEKCIRVA 159
Query: 248 ENLTNPQQISLVLAALRPGAVT-LTKDTNGHYVIQYCVKH 286
E P + LV + P + L +D+ +YV+Q C+ +
Sbjct: 160 E---PPLRHKLVAELVDPSRLELLLRDSFANYVVQTCLDY 196
>gi|25150422|ref|NP_508980.2| Protein PUF-9 [Caenorhabditis elegans]
gi|351061611|emb|CCD69461.1| Protein PUF-9 [Caenorhabditis elegans]
Length = 703
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 156/297 (52%), Gaps = 14/297 (4%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
+L+D++ N++ AKDQ+G R +Q+ + + IF V++ ELM D FGNYV+QK
Sbjct: 339 TLQDIKNNVIEFAKDQHGSRFIQQKLERASLRDKAAIFTPVLENAEELMTDVFGNYVIQK 398
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E + EQR +++ + + ++++ L +G R + K LE + Q +L +
Sbjct: 399 FFEFGNNEQRNQLVGTIRGN---VMKLALQMYGCRVIQKALEYVEEKYQHE-ILGEMEGQ 454
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV----ADNCYGIATDKSGCCVLQHCVEY 322
+ KD NG++VIQ ++ E +++++ +DN Y ++ GC V+Q +EY
Sbjct: 455 VLKCVKDQNGNHVIQKVIERVEPERLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLEY 514
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ-LEGHYVSFSCN 381
Q++ ++ + + L D YGNYV+QH++ P +++ + + F+ +
Sbjct: 515 CNEEQKQPVLDALQIHLKQLVLDQYGNYVIQHVIEHGSPSDKEQIVQDVISDDLLKFAQH 574
Query: 382 KYGSNVVERCLLESGEEQSTRIIIELLRSPN-----VSMLLMHPFGNYVIQSALLVS 433
K+ SNV+E+CL G + II ++ PN + ++ PF NYV+Q L V+
Sbjct: 575 KFASNVIEKCLTFGGHAERNLIIDKVCGDPNDPSPPLLQMMKDPFANYVVQKMLDVA 631
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 127/247 (51%), Gaps = 10/247 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RGN++ LA YGCR +Q+ + + ++ I E+ +V + + D GN+V+QK++E
Sbjct: 415 IRGNVMKLALQMYGCRVIQKALEYVEEKYQHEILGEMEGQVLKCVKDQNGNHVIQKVIER 474
Query: 211 CSEEQRTRILLMLT-NDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
E+ I+ T N+ + + ++ +G R + ++LE N +Q VL AL+
Sbjct: 475 VEPERLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLE-YCNEEQKQPVLDALQIHLKQ 533
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEV-ADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L D G+YVIQ+ ++H S D + ++ +V +D+ A K V++ C+ + A+R
Sbjct: 534 LVLDQYGNYVIQHVIEHGSPSDKEQIVQDVISDDLLKFAQHKFASNVIEKCLTFGGHAER 593
Query: 329 ERLVAEIIANA-------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
++ ++ + L + +D + NYVVQ +L + PQ + ++ H +
Sbjct: 594 NLIIDKVCGDPNDPSPPLLQMMKDPFANYVVQKMLDVADPQHRKKITLTIKPHIATLRKY 653
Query: 382 KYGSNVV 388
+G +++
Sbjct: 654 NFGKHIL 660
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 4/179 (2%)
Query: 255 QISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCC 314
Q L ++ + KD +G IQ ++ S D + V +N + TD G
Sbjct: 335 QTPKTLQDIKNNVIEFAKDQHGSRFIQQKLERASLRDKAAIFTPVLENAEELMTDVFGNY 394
Query: 315 VLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGH 374
V+Q E+ QR +LV I N + LA YG V+Q L + +L ++EG
Sbjct: 395 VIQKFFEFGNNEQRNQLVGTIRGNVMKLALQMYGCRVIQKALEYVEEKYQHEILGEMEGQ 454
Query: 375 YVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLMHPFGNYVIQSAL 430
+ ++ G++V+++ ++E E + + II+ S NV L +HP+G VIQ L
Sbjct: 455 VLKCVKDQNGNHVIQK-VIERVEPERLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVL 512
>gi|396082534|gb|AFN84143.1| Puf RNA-binding protein [Encephalitozoon romaleae SJ-2008]
Length = 529
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 163/292 (55%), Gaps = 15/292 (5%)
Query: 140 QDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPF 199
++ F +S++++ ++++KDQ G R +QR M ++ KEEI F + D EL + F
Sbjct: 209 KNVFGGTSMKEI---CISISKDQEGSRCIQRKMDNISKEEISWFFNNIADAAAELSANLF 265
Query: 200 GNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLV 259
GNYV+QK++ L +EE+RTR+ L Q+ + ++ +G R + KL++ +P + +
Sbjct: 266 GNYVIQKIIPLVTEEERTRLTTSLVG---QIHLLSVHPYGCRVIQKLVD--VSP-DVDFI 319
Query: 260 LAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHC 319
L ++ + L +D NG++VIQ C++ +D + +L + + N +AT K GC V+Q
Sbjct: 320 LEEVKGNLLELIEDQNGNHVIQKCIEKC--KDRRIILQQFSKNSLFLATHKYGCRVIQRM 377
Query: 320 VEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFS 379
+E+ K + + +V +I N L +D YGNYV+QH+L + + ++ ++ S
Sbjct: 378 LEFCKEEEIKDIVEILINNIKTLVDDQYGNYVIQHILTVGKEKEKNLVIEKIIEKSYELS 437
Query: 380 CNKYGSNVVERCLLESGEEQSTRIIIELLR----SPNVSMLLMHPFGNYVIQ 427
K+ SNVVE+C+ S Q R + + L P + + + +GNYV+Q
Sbjct: 438 KCKFSSNVVEQCVKLSNNGQRERFLEKFLEPVGSKPGMYSMCIDMYGNYVVQ 489
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 18/213 (8%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G I L+ YGCR +Q+ + P +++ I EV + EL+ D GN+V+QK +E
Sbjct: 289 LVGQIHLLSVHPYGCRVIQKLVDVSP--DVDFILEEVKGNLLELIEDQNGNHVIQKCIEK 346
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + RI+L F + L TH G R + ++LE ++I ++ L
Sbjct: 347 CKDR---RIILQ----QFSKNSLFLATHKYGCRVIQRMLE-FCKEEEIKDIVEILINNIK 398
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
TL D G+YVIQ+ + ++ ++ ++ + Y ++ K V++ CV+ S QR
Sbjct: 399 TLVDDQYGNYVIQHILTVGKEKEKNLVIEKIIEKSYELSKCKFSSNVVEQCVKLSNNGQR 458
Query: 329 ERLVAEIIA------NALLLAEDCYGNYVVQHL 355
ER + + + + D YGNYVVQ L
Sbjct: 459 ERFLEKFLEPVGSKPGMYSMCIDMYGNYVVQRL 491
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 104/204 (50%), Gaps = 7/204 (3%)
Query: 231 VRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHE 290
+ I + G R + + ++N++ ++IS + A L+ + G+YVIQ + + E
Sbjct: 222 ISISKDQEGSRCIQRKMDNISK-EEISWFFNNIADAAAELSANLFGNYVIQKIIPLVTEE 280
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ L + + ++ GC V+Q V+ S + ++ E+ N L L ED GN+
Sbjct: 281 ERTRLTTSLVGQIHLLSVHPYGCRVIQKLVDVSPDV--DFILEEVKGNLLELIEDQNGNH 338
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
V+Q + + +L+Q + + + +KYG V++R +LE +E+ + I+E+L +
Sbjct: 339 VIQK--CIEKCKDRRIILQQFSKNSLFLATHKYGCRVIQR-MLEFCKEEEIKDIVEILIN 395
Query: 411 PNVSMLLMHPFGNYVIQSALLVSK 434
N+ L+ +GNYVIQ L V K
Sbjct: 396 -NIKTLVDDQYGNYVIQHILTVGK 418
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 4/134 (2%)
Query: 303 CYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ 362
C I+ D+ G +Q ++ + I A L+ + +GNYV+Q ++ L +
Sbjct: 221 CISISKDQEGSRCIQRKMDNISKEEISWFFNNIADAAAELSANLFGNYVIQKIIPLVTEE 280
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFG 422
L L G S + YG V+++ + S + I+E ++ N+ L+ G
Sbjct: 281 ERTRLTTSLVGQIHLLSVHPYGCRVIQKLVDVSPD---VDFILEEVKG-NLLELIEDQNG 336
Query: 423 NYVIQSALLVSKVR 436
N+VIQ + K R
Sbjct: 337 NHVIQKCIEKCKDR 350
>gi|354479904|ref|XP_003502149.1| PREDICTED: pumilio homolog 2 isoform 2 [Cricetulus griseus]
Length = 986
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 629 RSRLLEDFRNNRFPNLQLRDLMGHIVEFSQDQHGSRFIQQKLERATPAERQMVFSEILQA 688
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 689 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 745
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 746 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 804
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 805 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 864
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 865 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 924
Query: 426 IQSAL 430
+Q +
Sbjct: 925 VQKMI 929
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 721 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 779
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 780 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 834
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 835 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 894
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 895 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 954
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 955 TYGKHILAK 963
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 793 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 852
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 853 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 911
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 912 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 968
>gi|297822641|ref|XP_002879203.1| mpt5-3 [Arabidopsis lyrata subsp. lyrata]
gi|297325042|gb|EFH55462.1| mpt5-3 [Arabidopsis lyrata subsp. lyrata]
Length = 973
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 156/288 (54%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G++V + DQYG R +Q+ + + +E M++ E++ + LM D FGNYV+QK
Sbjct: 633 LSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFGNYVIQKF 692
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E QR + L ++ ++ + L +G R + K +E + Q+I +V L
Sbjct: 693 FEHGLPPQRRELGEKLIDN---VLPLSLQMYGCRVIQKAIEVVDLDQKIKMV-KELDGHV 748
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++V+Q C++ E+ +++++ + ++T GC V+Q +E+
Sbjct: 749 MRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPD 808
Query: 328 RE-RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ +++ EI+ +LA+D YGNYVVQH+L P ++++L G V S K+ SN
Sbjct: 809 TQSKVMEEILITVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASN 868
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL G E+ ++ E+L + + + ++ F NYV+Q L
Sbjct: 869 VVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL 916
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
+LE + + L+ + V + D G IQ ++ + ++ + E+
Sbjct: 619 MLEEFKSNKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALA 678
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ QR L ++I N L L+ YG V+Q + +
Sbjct: 679 LMTDVFGNYVIQKFFEHGLPPQRRELGEKLIDNVLPLSLQMYGCRVIQKAIEVVDLDQKI 738
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++++L+GH + ++ G++VV++C +E E++ II +V L HP+G V
Sbjct: 739 KMVKELDGHVMRCVRDQNGNHVVQKC-IECVPEENIEFIISTFFG-HVVTLSTHPYGCRV 796
Query: 426 IQSAL 430
IQ L
Sbjct: 797 IQRVL 801
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 15/121 (12%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L G IV +++ ++ +++ ++ EE E++ E++ E +M D F N
Sbjct: 850 IKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFAN 909
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKL---------LENLTN 252
YVVQK++E C ++QR IL + L + H + V KL L++LT
Sbjct: 910 YVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHIVARVEKLVAAGERRMALQSLTQ 969
Query: 253 P 253
P
Sbjct: 970 P 970
>gi|344305475|gb|EGW35707.1| hypothetical protein SPAPADRAFT_58907 [Spathaspora passalidarum
NRRL Y-27907]
Length = 546
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 157/293 (53%), Gaps = 17/293 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+ V KDQYG R +Q+ ++S EE +F E+ D +LM D FGNYV+QK
Sbjct: 204 LKDIYGHAVEFTKDQYGSRFIQQKLNSSSDEEKATVFNEIKDISYDLMTDVFGNYVIQKY 263
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++Q+ +LT + + L +G R V + LE+L+ P Q++ ++ L+
Sbjct: 264 FEYGLKDQKE---FLLTKMKGHIYELSLQMYGCRVVQRALESLSLPGQLA-IIDELKDYI 319
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDT-KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++VIQ ++ D +++L ++D Y ++ GC V+Q +E+S
Sbjct: 320 LICAKDQNGNHVIQKSIEMIKPFDKIRFILTSLSDQIYQLSIHPYGCRVIQRLLEFSNLD 379
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
++ ++ ++ L +D YGNYV+QH+L +L+ + G V+FS +K+ SN
Sbjct: 380 DQKDILEQLNRYIFYLIQDQYGNYVIQHILEHGNENERNEILKVVTGSVVTFSKHKFASN 439
Query: 387 VVERCLLESGEEQSTRIIIELL------------RSPNVSMLLMHPFGNYVIQ 427
V+E+C+ Q +I+ E++ ++++++ + NYVIQ
Sbjct: 440 VIEKCIKFGSTAQKRKILDEVMIGNEDFSMELVSDDSSLALMMKDQYANYVIQ 492
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 110/223 (49%), Gaps = 17/223 (7%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++G+I L+ YGCR +QR + SL I E+ D + D GN+V+QK
Sbjct: 276 LTKMKGHIYELSLQMYGCRVVQRALESLSLPGQLAIIDELKDYILICAKDQNGNHVIQKS 335
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E+ + R +L +D Q+ ++ ++ +G R + +LLE +N +L L
Sbjct: 336 IEMIKPFDKIRFILTSLSD--QIYQLSIHPYGCRVIQRLLE-FSNLDDQKDILEQLNRYI 392
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
L +D G+YVIQ+ ++H + + +L V + + K V++ C+++ AQ
Sbjct: 393 FYLIQDQYGNYVIQHILEHGNENERNEILKVVTGSVVTFSKHKFASNVIEKCIKFGSTAQ 452
Query: 328 RERLVAEII--------------ANALLLAEDCYGNYVVQHLL 356
+ +++ E++ ++ L+ +D Y NYV+Q L+
Sbjct: 453 KRKILDEVMIGNEDFSMELVSDDSSLALMMKDQYANYVIQKLV 495
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 4/190 (2%)
Query: 246 LLENL-TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
LLE + NP+ L + AV TKD G IQ + S E+ + NE+ D Y
Sbjct: 189 LLEEIRANPKDKEFFLKDIYGHAVEFTKDQYGSRFIQQKLNSSSDEEKATVFNEIKDISY 248
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLL-ALRVPQI 363
+ TD G V+Q EY Q+E L+ ++ + L+ YG VVQ L +L +P
Sbjct: 249 DLMTDVFGNYVIQKYFEYGLKDQKEFLLTKMKGHIYELSLQMYGCRVVQRALESLSLPGQ 308
Query: 364 TASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGN 423
A ++ +L+ + + + ++ G++V+++ + R I+ L S + L +HP+G
Sbjct: 309 LA-IIDELKDYILICAKDQNGNHVIQKSIEMIKPFDKIRFILTSL-SDQIYQLSIHPYGC 366
Query: 424 YVIQSALLVS 433
VIQ L S
Sbjct: 367 RVIQRLLEFS 376
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 95/201 (47%), Gaps = 4/201 (1%)
Query: 231 VRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHE 290
V + +G R + + L N ++ ++ + V ++ + L D G+YVIQ ++ +
Sbjct: 212 VEFTKDQYGSRFIQQKL-NSSSDEEKATVFNEIKDISYDLMTDVFGNYVIQKYFEYGLKD 270
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
++LL ++ + Y ++ GC V+Q +E + ++ E+ L+ A+D GN+
Sbjct: 271 QKEFLLTKMKGHIYELSLQMYGCRVVQRALESLSLPGQLAIIDELKDYILICAKDQNGNH 330
Query: 351 VVQHLLALRVP-QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLR 409
V+Q + + P +L L S + YG V++R L S + I+ +L R
Sbjct: 331 VIQKSIEMIKPFDKIRFILTSLSDQIYQLSIHPYGCRVIQRLLEFSNLDDQKDILEQLNR 390
Query: 410 SPNVSMLLMHPFGNYVIQSAL 430
+ L+ +GNYVIQ L
Sbjct: 391 Y--IFYLIQDQYGNYVIQHIL 409
>gi|323353882|gb|EGA85735.1| Puf3p [Saccharomyces cerevisiae VL3]
Length = 831
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 160/299 (53%), Gaps = 25/299 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+ + KDQ+G R +QR +++ P E E+IF E+ D EL D FGNYV+QK
Sbjct: 536 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 595
Query: 208 VELCSEEQRTRILLMLTNDDFQ--LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
E S+ Q+ ++ D F+ + ++ L + R + K LE + + Q+I LVL L
Sbjct: 596 FEFGSKIQKNTLV-----DQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVL-ELSD 649
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
+ + KD NG++VIQ ++ E ++L+ + + Y ++T GC V+Q +E+
Sbjct: 650 SVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSS 709
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLA------LRVPQITASLLRQLEGHYVSFS 379
+E ++ E+ L +D YGNYV+Q++L + I ++ + + V +S
Sbjct: 710 EDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANNVVEYS 769
Query: 380 CNKYGSNVVERCLLESGEEQSTRIIIELL-RSPNVS--------MLLM--HPFGNYVIQ 427
+K+ SNVVE+ +L ++Q II ++L R N + M+LM F NYVIQ
Sbjct: 770 KHKFASNVVEKSILYGSKDQKDSIISKILPRDKNHALNLEDDSPMILMIKDQFANYVIQ 828
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 5/201 (2%)
Query: 231 VRICLNTHGIRAVLKLLENLTNP-QQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSH 289
+ C + HG R + + L T+P + ++ +R A+ L+ D G+YVIQ + S
Sbjct: 544 LEFCKDQHGSRFIQREL--ATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKFFEFGSK 601
Query: 290 EDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGN 349
L+++ N ++ C V+Q +EY QR LV E+ + L + +D GN
Sbjct: 602 IQKNTLVDQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVLELSDSVLQMIKDQNGN 661
Query: 350 YVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLR 409
+V+Q + + +L L GH S + YG V++R LLE G + I+ L+
Sbjct: 662 HVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQR-LLEFGSSEDQESILNELK 720
Query: 410 SPNVSMLLMHPFGNYVIQSAL 430
+ L+ +GNYVIQ L
Sbjct: 721 D-FIPYLIQDQYGNYVIQYVL 740
>gi|344280367|ref|XP_003411955.1| PREDICTED: pumilio homolog 2 [Loxodonta africana]
Length = 1067
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 710 RSRLLEDFRNNRFPNLQLRDLMGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 769
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 770 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 826
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 827 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 885
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 886 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 945
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 946 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 1005
Query: 426 IQSAL 430
+Q +
Sbjct: 1006 VQKMI 1010
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 802 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 860
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 861 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 915
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 916 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 975
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 976 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 1035
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1036 TYGKHILAK 1044
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 874 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 933
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 934 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 992
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 993 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1049
>gi|15227038|ref|NP_180478.1| pumilio 3 [Arabidopsis thaliana]
gi|75217073|sp|Q9ZW02.1|PUM3_ARATH RecName: Full=Pumilio homolog 3; Short=APUM-3; Short=AtPUM3
gi|3980417|gb|AAC95220.1| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis
thaliana]
gi|330253122|gb|AEC08216.1| pumilio 3 [Arabidopsis thaliana]
Length = 964
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 156/288 (54%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G++V + DQYG R +Q+ + + +E M++ E++ + LM D FGNYV+QK
Sbjct: 624 LSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPKALALMTDVFGNYVIQKF 683
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E QR + L ++ ++ + L +G R + K +E + Q+I +V L
Sbjct: 684 FEHGLPPQRRELGEKLIDN---VLPLSLQMYGCRVIQKAIEVVDLDQKIQMV-KELDGHV 739
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++V+Q C++ E+ +++++ + ++T GC V+Q +E+
Sbjct: 740 MRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHNPD 799
Query: 328 RE-RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ +++ EI++ +L +D YGNYVVQH+L P ++++L G V S K+ SN
Sbjct: 800 TQSKVMEEILSTVSMLTQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASN 859
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL G E+ ++ E+L + + + ++ F NYV+Q L
Sbjct: 860 VVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL 907
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 132/269 (49%), Gaps = 14/269 (5%)
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSE 213
N++ L+ YGCR +Q+ + + ++ + E+ V + D GN+VVQK +E E
Sbjct: 702 NVLPLSLQMYGCRVIQKAIEVVDLDQKIQMVKELDGHVMRCVRDQNGNHVVQKCIECVPE 761
Query: 214 EQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKD 273
E I +++ +V + + +G R + ++LE+ NP S V+ + LT+D
Sbjct: 762 EN---IEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHNPDTQSKVMEEILSTVSMLTQD 818
Query: 274 TNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVA 333
G+YV+Q+ ++H ++ ++ E+A ++ K V++ C+ + +RE LV
Sbjct: 819 QYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVN 878
Query: 334 EIIANA------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
E++ + +D + NYVVQ +L Q +L +++ H + YG ++
Sbjct: 879 EMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHI 938
Query: 388 VERC--LLESGEEQSTRIIIELLRSPNVS 414
V R L+ +GE R+ ++ L P V+
Sbjct: 939 VARVEKLVAAGER---RMALQSLPQPLVA 964
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
+LE + + L+ + V + D G IQ ++ + ++ + E+
Sbjct: 610 MLEEFKSNKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPKALA 669
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ QR L ++I N L L+ YG V+Q + +
Sbjct: 670 LMTDVFGNYVIQKFFEHGLPPQRRELGEKLIDNVLPLSLQMYGCRVIQKAIEVVDLDQKI 729
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++++L+GH + ++ G++VV++C +E E++ II +V L HP+G V
Sbjct: 730 QMVKELDGHVMRCVRDQNGNHVVQKC-IECVPEENIEFIISTFFG-HVVTLSTHPYGCRV 787
Query: 426 IQSAL 430
IQ L
Sbjct: 788 IQRVL 792
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L G IV +++ ++ +++ ++ EE E++ E++ E +M D F N
Sbjct: 841 IKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFAN 900
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 901 YVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHIVARVEKLV 946
>gi|348517676|ref|XP_003446359.1| PREDICTED: pumilio homolog 2 isoform 3 [Oreochromis niloticus]
Length = 1076
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 169/316 (53%), Gaps = 13/316 (4%)
Query: 121 SVPRNQWMSSLSLKRNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLP 176
S PR + R++ L+D F LRDL G++V ++DQ+G R +Q+ +
Sbjct: 705 SRPRYSRSDVMPSGRSRLLEDFRNNRFPNLQLRDLPGHMVEFSQDQHGSRFIQQKLERAT 764
Query: 177 KEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLN 236
E +M+F E++ +LM D FGNYV+QK E S +Q+ L + T ++ + L
Sbjct: 765 PAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSADQK---LALATRIRGHVLPLALQ 821
Query: 237 THGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLL 296
+G R + K LE++++ QQ S ++ L + KD NG++V+Q C++ + ++++
Sbjct: 822 MYGCRVIQKALESISSDQQ-SDIVRELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFII 880
Query: 297 NEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLL 356
+ + ++T GC V+Q +E+ Q ++ E+ ++ L +D YGNYV+QH+L
Sbjct: 881 DAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHSEQLGQDQYGNYVIQHVL 940
Query: 357 ALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL---LRSPNV 413
P+ + ++ ++ G + S +K+ SNVVE+C++ S + +I E+ P+
Sbjct: 941 EHGRPEDKSKIVAEVRGKVLVLSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHS 1000
Query: 414 SMLLM--HPFGNYVIQ 427
++ M + NYV+Q
Sbjct: 1001 ALYTMMKDQYANYVVQ 1016
>gi|326512890|dbj|BAK03352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 603
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 178/368 (48%), Gaps = 38/368 (10%)
Query: 103 LLHNHNFDGLRSNGNELSS--VPRNQWMSSLSLKRNQWLQDSFD----CS---------- 146
+ F G+ +G + P ++ M+++S + Q ++ FD C+
Sbjct: 208 VFQGQPFSGISPSGRNDPARFQPASRNMTAVSGFQGQREREKFDSPKACTFLEELKSNRA 267
Query: 147 ---SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYV 203
L D+ G IV + DQ+G R +Q+ + + EE +F EV+ LM D FGNYV
Sbjct: 268 RRVELSDITGRIVDFSADQHGSRFIQQKLENCTAEEKAAVFAEVLPHASSLMTDVFGNYV 327
Query: 204 VQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL 263
+QK E + EQR + L +V + L +G R + K LE + Q+I LV L
Sbjct: 328 IQKFFEHGTPEQRRDLAAKLAG---HVVPLSLQMYGCRVIQKALEVMELDQKIDLV-REL 383
Query: 264 RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
+ +D NG++VIQ C++ E ++++ ++ GC V+Q +E+
Sbjct: 384 DGNIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHC 443
Query: 324 KGAQRER-LVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
G R + ++ EI+ +A +LA+D YGNYV QH++ A ++ +L G V+ S NK
Sbjct: 444 GGDSRGQCIIDEILQSACILAQDQYGNYVTQHVVEKGKSHERAQIISKLAGQVVTMSQNK 503
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSP--NVSMLLM--HPFGNYVIQS---------- 428
+ SNV+E+C + +I E++ N ++L M + NYV+Q
Sbjct: 504 FASNVIEKCFQHGDIAERDLLIREIVEQTDGNDTLLAMMKDQYANYVVQKILETCNDEQR 563
Query: 429 ALLVSKVR 436
LLVS+V+
Sbjct: 564 ELLVSRVK 571
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 124/253 (49%), Gaps = 9/253 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G++V L+ YGCR +Q+ + + ++ + E+ + + D GN+V+QK +E
Sbjct: 347 LAGHVVPLSLQMYGCRVIQKALEVMELDQKIDLVRELDGNIMRCVRDQNGNHVIQKCIEC 406
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E I +++ Q+ + ++ +G R + ++LE+ + ++ + A L
Sbjct: 407 VPTEH---IGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSRGQCIIDEILQSACIL 463
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YV Q+ V+ + +++++A ++ +K V++ C ++ A+R+
Sbjct: 464 AQDQYGNYVTQHVVEKGKSHERAQIISKLAGQVVTMSQNKFASNVIEKCFQHGDIAERDL 523
Query: 331 LVAEII----ANALLLA--EDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ EI+ N LLA +D Y NYVVQ +L + L+ +++GH + YG
Sbjct: 524 LIREIVEQTDGNDTLLAMMKDQYANYVVQKILETCNDEQRELLVSRVKGHLQALRKYTYG 583
Query: 385 SNVVERCLLESGE 397
++ R GE
Sbjct: 584 KHIASRVEQLCGE 596
>gi|348517674|ref|XP_003446358.1| PREDICTED: pumilio homolog 2 isoform 2 [Oreochromis niloticus]
Length = 1188
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 169/316 (53%), Gaps = 13/316 (4%)
Query: 121 SVPRNQWMSSLSLKRNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLP 176
S PR + R++ L+D F LRDL G++V ++DQ+G R +Q+ +
Sbjct: 817 SRPRYSRSDVMPSGRSRLLEDFRNNRFPNLQLRDLPGHMVEFSQDQHGSRFIQQKLERAT 876
Query: 177 KEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLN 236
E +M+F E++ +LM D FGNYV+QK E S +Q+ L + T ++ + L
Sbjct: 877 PAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSADQK---LALATRIRGHVLPLALQ 933
Query: 237 THGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLL 296
+G R + K LE++++ QQ S ++ L + KD NG++V+Q C++ + ++++
Sbjct: 934 MYGCRVIQKALESISSDQQ-SDIVRELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFII 992
Query: 297 NEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLL 356
+ + ++T GC V+Q +E+ Q ++ E+ ++ L +D YGNYV+QH+L
Sbjct: 993 DAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHSEQLGQDQYGNYVIQHVL 1052
Query: 357 ALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL---LRSPNV 413
P+ + ++ ++ G + S +K+ SNVVE+C++ S + +I E+ P+
Sbjct: 1053 EHGRPEDKSKIVAEVRGKVLVLSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHS 1112
Query: 414 SMLLM--HPFGNYVIQ 427
++ M + NYV+Q
Sbjct: 1113 ALYTMMKDQYANYVVQ 1128
>gi|158828285|gb|ABW81161.1| unknown [Capsella rubella]
Length = 991
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 155/288 (53%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G++V + DQYG R +Q+ + + +E M++ E++ LM D FGNYV+QK
Sbjct: 620 LSEIAGHVVEFSADQYGSRFIQQKLETATTDEKNMVYEEIMPHALALMTDVFGNYVIQKF 679
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E QR + L + ++ + L +G R + K +E + Q+I +V L
Sbjct: 680 FEHGLPPQRRELGDKLFEN---VLPLSLQMYGCRVIQKAIEVVDLDQKIKMV-KELDGHV 735
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++V+Q C++ E+ +++++ + ++T GC V+Q +E+
Sbjct: 736 MRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVSLSTHPYGCRVIQRVLEHCHDPD 795
Query: 328 RE-RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ +++ EI++ +LA+D YGNYVVQH+L P ++++L G V S K+ SN
Sbjct: 796 TQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASN 855
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL G E+ ++ E+L + + + ++ F NYV+Q L
Sbjct: 856 VVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL 903
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE + + L+ + V + D G IQ ++ + ++ + E+ +
Sbjct: 606 LLEEFKSNKTRGFELSEIAGHVVEFSADQYGSRFIQQKLETATTDEKNMVYEEIMPHALA 665
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ QR L ++ N L L+ YG V+Q + +
Sbjct: 666 LMTDVFGNYVIQKFFEHGLPPQRRELGDKLFENVLPLSLQMYGCRVIQKAIEVVDLDQKI 725
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++++L+GH + ++ G++VV++C +E E++ II VS L HP+G V
Sbjct: 726 KMVKELDGHVMRCVRDQNGNHVVQKC-IECVPEENIEFIISTFFGHVVS-LSTHPYGCRV 783
Query: 426 IQSAL 430
IQ L
Sbjct: 784 IQRVL 788
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L G IV +++ ++ +++ ++ EE E++ E++ E +M D F N
Sbjct: 837 IKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFAN 896
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + + KL+
Sbjct: 897 YVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHVVARIEKLV 942
>gi|6323016|ref|NP_013088.1| Puf3p [Saccharomyces cerevisiae S288c]
gi|34922927|sp|Q07807.1|PUF3_YEAST RecName: Full=mRNA-binding protein PUF3; AltName: Full=Pumilio
homology domain family member 3
gi|1360181|emb|CAA97458.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1495211|emb|CAA62779.1| L1325 protein [Saccharomyces cerevisiae]
gi|285813409|tpg|DAA09305.1| TPA: Puf3p [Saccharomyces cerevisiae S288c]
Length = 879
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 163/306 (53%), Gaps = 25/306 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+ + KDQ+G R +QR +++ P E E+IF E+ D EL D FGNYV+QK
Sbjct: 536 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 595
Query: 208 VELCSEEQRTRILLMLTNDDFQ--LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
E S+ Q+ ++ D F+ + ++ L + R + K LE + + Q+I LVL L
Sbjct: 596 FEFGSKIQKNTLV-----DQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVL-ELSD 649
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
+ + KD NG++VIQ ++ E ++L+ + + Y ++T GC V+Q +E+
Sbjct: 650 SVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSS 709
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLA------LRVPQITASLLRQLEGHYVSFS 379
+E ++ E+ L +D YGNYV+Q++L + I ++ + + V +S
Sbjct: 710 EDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANNVVEYS 769
Query: 380 CNKYGSNVVERCLLESGEEQSTRIIIELL-RSPNVS--------MLLM--HPFGNYVIQS 428
+K+ SNVVE+ +L + Q II ++L R N + M+LM F NYVIQ
Sbjct: 770 KHKFASNVVEKSILYGSKNQKDLIISKILPRDKNHALNLEDDSPMILMIKDQFANYVIQK 829
Query: 429 ALLVSK 434
+ VS+
Sbjct: 830 LVNVSE 835
>gi|392297936|gb|EIW09035.1| Puf3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 879
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 163/306 (53%), Gaps = 25/306 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+ + KDQ+G R +QR +++ P E E+IF E+ D EL D FGNYV+QK
Sbjct: 536 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 595
Query: 208 VELCSEEQRTRILLMLTNDDFQ--LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
E S+ Q+ ++ D F+ + ++ L + R + K LE + + Q+I LVL L
Sbjct: 596 FEFGSKIQKNTLV-----DQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVL-ELSD 649
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
+ + KD NG++VIQ ++ E ++L+ + + Y ++T GC V+Q +E+
Sbjct: 650 SVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSS 709
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLA------LRVPQITASLLRQLEGHYVSFS 379
+E ++ E+ L +D YGNYV+Q++L + I ++ + + V +S
Sbjct: 710 EDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANNVVEYS 769
Query: 380 CNKYGSNVVERCLLESGEEQSTRIIIELL-RSPNVS--------MLLM--HPFGNYVIQS 428
+K+ SNVVE+ +L + Q II ++L R N + M+LM F NYVIQ
Sbjct: 770 KHKFASNVVEKSILYGSKNQKDLIISKILPRDKNHALNLEDDSPMILMIKDQFANYVIQK 829
Query: 429 ALLVSK 434
+ VS+
Sbjct: 830 LVNVSE 835
>gi|367007100|ref|XP_003688280.1| hypothetical protein TPHA_0N00650 [Tetrapisispora phaffii CBS 4417]
gi|357526588|emb|CCE65846.1| hypothetical protein TPHA_0N00650 [Tetrapisispora phaffii CBS 4417]
Length = 957
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 164/311 (52%), Gaps = 27/311 (8%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
+L+D+ G+ + KDQ+G R +Q ++ + E E+IF ++ D + EL D FGNYV+QK
Sbjct: 606 TLKDIHGHTLEFCKDQHGSRFIQHELAVVKPSEKEIIFNKIRDHILELSDDVFGNYVIQK 665
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E SE QR +++ N +++++ + + R + + LE + Q+I LVL L+
Sbjct: 666 FFEFGSETQRK---VLVENFRGKMIKLSMQMYACRVIQRALEFIEPDQKIELVLE-LKDC 721
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ + KD NG++VIQ ++H + ++L + Y ++T GC V+Q +E+
Sbjct: 722 VLPMIKDQNGNHVIQKAIEHIPISEISFILQSLTGQIYHLSTHAYGCRVIQRLLEFGSKE 781
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLL------------ALRVPQITASLLRQLEGH 374
+ ++ E+ L +D YGNYV+Q+LL + R+ + ++ + +
Sbjct: 782 NQTAILEELFDFIPYLIQDQYGNYVIQYLLQQKEEDLEQENFSPRIKKAKQEIINIVSEN 841
Query: 375 YVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLR---------SPNVSMLLM--HPFGN 423
V FS +K+ SNVVE+ +L +EQ I+ ++L + + M+LM F N
Sbjct: 842 VVDFSKHKFASNVVEKTILYGNKEQRKTILSQILPHDLKHASSLNDDDPMILMMRDQFAN 901
Query: 424 YVIQSALLVSK 434
YV+Q + V++
Sbjct: 902 YVVQKLVGVTE 912
>gi|349579714|dbj|GAA24875.1| K7_Puf3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 879
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 163/306 (53%), Gaps = 25/306 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+ + KDQ+G R +QR +++ P E E+IF E+ D EL D FGNYV+QK
Sbjct: 536 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 595
Query: 208 VELCSEEQRTRILLMLTNDDFQ--LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
E S+ Q+ ++ D F+ + ++ L + R + K LE + + Q+I LVL L
Sbjct: 596 FEFGSKIQKNTLV-----DQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVL-ELSD 649
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
+ + KD NG++VIQ ++ E ++L+ + + Y ++T GC V+Q +E+
Sbjct: 650 SVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSS 709
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLA------LRVPQITASLLRQLEGHYVSFS 379
+E ++ E+ L +D YGNYV+Q++L + I ++ + + V +S
Sbjct: 710 EDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANNVVEYS 769
Query: 380 CNKYGSNVVERCLLESGEEQSTRIIIELL-RSPNVS--------MLLM--HPFGNYVIQS 428
+K+ SNVVE+ +L + Q II ++L R N + M+LM F NYVIQ
Sbjct: 770 KHKFASNVVEKSILYGSKNQKDLIISKILPRDKNHALNLEDDSPMILMIKDQFANYVIQK 829
Query: 429 ALLVSK 434
+ VS+
Sbjct: 830 LVNVSE 835
>gi|297790299|ref|XP_002863049.1| hypothetical protein ARALYDRAFT_920647 [Arabidopsis lyrata subsp.
lyrata]
gi|297308854|gb|EFH39308.1| hypothetical protein ARALYDRAFT_920647 [Arabidopsis lyrata subsp.
lyrata]
Length = 503
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 157/288 (54%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G++V + DQYG R +Q+ + + +E M++ E++ + LM D FGNYV+QK
Sbjct: 163 LSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFGNYVIQKF 222
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E QR + L ++ ++ + L +G R + K +E + Q+I +V L
Sbjct: 223 FEHGLPPQRRELGEKLIDN---VLPLSLQMYGCRVIQKAIEVVDLDQKIKMV-KELDGHV 278
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++V+Q C++ E+ +++++ + ++T GC V+Q +E+
Sbjct: 279 MRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPD 338
Query: 328 RE-RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ +++ EI++ +LA+D YGNYVVQH+L P ++++L G V S K+ SN
Sbjct: 339 TQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASN 398
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL G E+ ++ E+L + + + ++ F NYV+Q L
Sbjct: 399 VVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL 446
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
+LE + + L+ + V + D G IQ ++ + ++ + E+
Sbjct: 149 MLEEFKSNKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALA 208
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ QR L ++I N L L+ YG V+Q + +
Sbjct: 209 LMTDVFGNYVIQKFFEHGLPPQRRELGEKLIDNVLPLSLQMYGCRVIQKAIEVVDLDQKI 268
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++++L+GH + ++ G++VV++C +E E++ II +V L HP+G V
Sbjct: 269 KMVKELDGHVMRCVRDQNGNHVVQKC-IECVPEENIEFIISTFFG-HVVTLSTHPYGCRV 326
Query: 426 IQSAL 430
IQ L
Sbjct: 327 IQRVL 331
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 15/121 (12%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L G IV +++ ++ +++ ++ EE E++ E++ E +M D F N
Sbjct: 380 IKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFAN 439
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKL---------LENLTN 252
YVVQK++E C ++QR IL + L + H + V KL L++LT
Sbjct: 440 YVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHIVARVEKLVAAGERRMALQSLTQ 499
Query: 253 P 253
P
Sbjct: 500 P 500
>gi|390179099|ref|XP_002137873.2| GA30209, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859712|gb|EDY68431.2| GA30209, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 907
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 153/289 (52%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK
Sbjct: 476 LRDLLNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKF 535
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+ + + + QL L +G R + K LE+++ P+Q ++ L
Sbjct: 536 FEFGTPEQKNTLGMQVKGHVLQL---ALQMYGCRVIQKALESIS-PEQQQEIVHELDGHV 591
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++N Y ++T GC V+Q +E+ Q
Sbjct: 592 LKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQ 651
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ N L +D YGNYV+QH+L + + L+ + G + S +K+ SNV
Sbjct: 652 TTPILDELHENTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNV 711
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + T +I E+ + +++ + NYV+Q + VS+
Sbjct: 712 VEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSE 760
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 125/244 (51%), Gaps = 12/244 (4%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
++G+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +E
Sbjct: 550 QVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIE 609
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGA 267
C + + L + F+ L+TH G R + ++LE+ T +Q + +L L
Sbjct: 610 -CVDP----VALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTA-EQTTPILDELHENT 663
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
L +D G+YVIQ+ ++H ED L+N V ++ K V++ CV ++ +
Sbjct: 664 EQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGE 723
Query: 328 RERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
R L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H + Y
Sbjct: 724 RTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMTALRKYTY 783
Query: 384 GSNV 387
G ++
Sbjct: 784 GKHI 787
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + + + +E+ Y
Sbjct: 461 RLLEDFRNQRYPNLQLRDLLNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAY 520
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q+ L ++ + L LA YG V+Q L P+
Sbjct: 521 SLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQ 580
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++ +L+GH + ++ G++VV++C +E + + + II + V L HP+G
Sbjct: 581 QEIVHELDGHVLKCVKDQNGNHVVQKC-IECVDPVALQFIINAFKG-QVYSLSTHPYGCR 638
Query: 425 VIQSAL 430
VIQ L
Sbjct: 639 VIQRIL 644
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 64/140 (45%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +L N L +DQYG +Q + +E+ ++ V +V L F + VV+K
Sbjct: 656 LDELHENTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 715
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + +RT ++ + + + + + V++ + +++ P Q+ ++ +RP
Sbjct: 716 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHM 775
Query: 268 VTLTKDTNGHYVIQYCVKHF 287
L K T G ++ K++
Sbjct: 776 TALRKYTYGKHINAKLEKYY 795
>gi|355714563|gb|AES05045.1| pumilio-like protein 2 [Mustela putorius furo]
Length = 600
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 243 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 302
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 303 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 359
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 360 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 418
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 419 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 478
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLMHP--FGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 479 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 538
Query: 426 IQSAL 430
+Q +
Sbjct: 539 VQKMI 543
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ + E+
Sbjct: 313 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELD 372
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 373 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 427
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 428 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 486
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 487 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMA 546
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 547 EPAQRKIIMHKIRPHITTLRKYTYGKHILAK 577
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + L+ YGCR +QR + E+ I E+ +L+
Sbjct: 401 QFIIDAF--------KGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ 452
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L L+ F +V C+ TH RA
Sbjct: 453 DQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALL 511
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +++ +RP TL K T G
Sbjct: 512 IDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYG 571
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 572 KHILAKLEKYY 582
>gi|351699449|gb|EHB02368.1| Pumilio-like protein 2 [Heterocephalus glaber]
Length = 1059
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 165/303 (54%), Gaps = 13/303 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 700 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 759
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 760 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 816
Query: 251 TNPQQ-ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATD 309
++ QQ IS ++ L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 817 SSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTH 876
Query: 310 KSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLR 369
GC V+Q +E+ Q ++ E+ + L +D YGNYVVQH+L P+ + ++
Sbjct: 877 PYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVVQHVLEHGRPEDRSRVVS 936
Query: 370 QLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNY 424
++ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NY
Sbjct: 937 EVRGEVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANY 996
Query: 425 VIQ 427
V+Q
Sbjct: 997 VVQ 999
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 99/227 (43%), Gaps = 15/227 (6%)
Query: 216 RTRILLMLTNDDF----------QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
R+R+L N+ F +V + HG R + + LE T P + +V +
Sbjct: 700 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERAT-PAERQMVFNEILQ 758
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
A L D G+YVIQ + S + L + + +A GC V+Q +E
Sbjct: 759 AAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISS 818
Query: 326 AQR--ERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
Q+ +V E+ + L +D GN+VVQ + PQ ++ +G S + Y
Sbjct: 819 DQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPY 878
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
G V++R L EQ+ I+ EL + + L+ +GNYV+Q L
Sbjct: 879 GCRVIQRILEHCTAEQTLPILEELHQ--HTEQLVQDQYGNYVVQHVL 923
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 106/215 (49%), Gaps = 11/215 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+++L G+++ KDQ G +Q+ + + + ++ I +V L P+G V+Q++
Sbjct: 827 VKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRI 886
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E C+ EQ IL L QLV+ + +G V +LE+ P+ S V++ +R
Sbjct: 887 LEHCTAEQTLPILEELHQHTEQLVQ---DQYGNYVVQHVLEH-GRPEDRSRVVSEVRGEV 942
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVA-------DNCYGIATDKSGCCVLQHCV 320
+ L++ V++ CV H S + L++EV Y + D+ V+Q V
Sbjct: 943 LALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMV 1002
Query: 321 EYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHL 355
+ ++ AQR+ ++ +I + L + YG +++ L
Sbjct: 1003 DMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKL 1037
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYVVQ ++E
Sbjct: 866 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVVQHVLEH 925
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E R+R++ L L+ F +V C+ TH RA
Sbjct: 926 GRPEDRSRVVSEVRGEVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 984
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 985 LYTMMKDQYANYVVQKMVDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1041
>gi|432096853|gb|ELK27431.1| Pumilio like protein 2 [Myotis davidii]
Length = 959
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 602 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 661
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 662 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 718
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 719 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 777
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 778 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 837
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 838 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 897
Query: 426 IQSAL 430
IQ +
Sbjct: 898 IQKMI 902
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ + E+
Sbjct: 672 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELD 731
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 732 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 786
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 787 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 845
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ + + +D Y NYV+Q ++ +
Sbjct: 846 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVIQKMIDMA 905
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 906 EPAQRKIIMHKIRPHITTLRKYTYGKHILAK 936
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + L+ YGCR +QR + E+ I E+ +L+
Sbjct: 760 QFIIDAF--------KGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ 811
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L L+ F +V C+ TH RA
Sbjct: 812 DQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALL 870
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +++ +RP TL K T G
Sbjct: 871 IDEVCCQNDGPHSALYTMMKDQYANYVIQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYG 930
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 931 KHILAKLEKYY 941
>gi|403333004|gb|EJY65564.1| Pumilio domain-containing protein [Oxytricha trifallax]
Length = 1075
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 145/287 (50%), Gaps = 4/287 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++G + LA Q G R LQ+ ++ + E+ +C+LMID +GNY Q L
Sbjct: 695 LEIIKGQVHKLALTQKGSRFLQKQVTKANSGIVAYFLNEISPHLCDLMIDNYGNYFCQSL 754
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+ CS EQR IL + + + IC + G + + E + P++ + AL
Sbjct: 755 LSSCSGEQRLSILRAIQP---KFIEICCDRKGTHTIQTMFELVNLPEEEDFIRDALMGNV 811
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA- 326
+ L+KD G +V+Q + F ++ EV D +A + +G CV++ V+++K
Sbjct: 812 IRLSKDPQGTHVVQKVMASFPEHKRAFIYEEVFDQFIELAKNNNGLCVVKKLVQFTKNTD 871
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q L+ + NA+ L +D +GNY V ++ P++ + L S K+ SN
Sbjct: 872 QAVILMKRLQENAIDLVQDPFGNYAVTEIVVKWEPEVCRPIFEVLRSRISQLSSQKFSSN 931
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVS 433
V+E+CL + E+ +I+EL S ++ L+ + +GNYV+Q AL +S
Sbjct: 932 VIEKCLERADEQMRAGLIVELAYSDRLTSLIRNQYGNYVVQKALKLS 978
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 8/231 (3%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMS--SLPKEEIEMIFVEVIDRVCELMIDPFGNYV 203
S LR ++ + + D+ G +Q +LP+EE + I ++ V L DP G +V
Sbjct: 765 SILRAIQPKFIEICCDRKGTHTIQTMFELVNLPEEE-DFIRDALMGNVIRLSKDPQGTHV 823
Query: 204 VQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL 263
VQK++ E +R I + + Q + + N +G+ V KL++ N Q +++ L
Sbjct: 824 VQKVMASFPEHKRAFIYEEVFD---QFIELAKNNNGLCVVKKLVQFTKNTDQAVILMKRL 880
Query: 264 RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
+ A+ L +D G+Y + V + E + + + +++ K V++ C+E +
Sbjct: 881 QENAIDLVQDPFGNYAVTEIVVKWEPEVCRPIFEVLRSRISQLSSQKFSSNVIEKCLERA 940
Query: 324 KGAQRERLVAEIIANALL--LAEDCYGNYVVQHLLALRVPQITASLLRQLE 372
R L+ E+ + L L + YGNYVVQ L L + Q L+ ++
Sbjct: 941 DEQMRAGLIVELAYSDRLTSLIRNQYGNYVVQKALKLSLGQEKEILMASIQ 991
>gi|347970897|ref|XP_003436658.1| AGAP003914-PB [Anopheles gambiae str. PEST]
gi|333469539|gb|EGK97332.1| AGAP003914-PB [Anopheles gambiae str. PEST]
Length = 1378
Score = 149 bits (376), Expect = 3e-33, Method: Composition-based stats.
Identities = 86/289 (29%), Positives = 155/289 (53%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +++F E++ LM D FGNYV+QK
Sbjct: 931 LRDLTNHIVEFSQDQHGSRFIQQKLERAISVEKQLVFNEILGAAYSLMTDVFGNYVIQKF 990
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ + + ++ + L +G R + K LE++ QQ +V L
Sbjct: 991 FEFGSPEQKQALAQQVKG---HVLPLALQMYGCRVIQKALESIPAEQQQEIV-RELDGHV 1046
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ +++++ + Y ++T GC V+Q +E+ Q
Sbjct: 1047 LKCVKDQNGNHVVQKCIECVDPVALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHCTPEQ 1106
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++AE+ AN L +D YGNYV+QH+L P+ ++L+ + G + S +K+ SNV
Sbjct: 1107 TAPILAELHANTEHLIQDQYGNYVIQHVLEHGKPEDKSALIASVRGKVLILSQHKFASNV 1166
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ + +++ + NYV+Q + VS+
Sbjct: 1167 VEKCVTHATRAERALLIEEVCSFNDSGLHVMMKDQYANYVVQKMIDVSE 1215
Score = 110 bits (274), Expect = 2e-21, Method: Composition-based stats.
Identities = 73/248 (29%), Positives = 129/248 (52%), Gaps = 12/248 (4%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ ++G+++ LA YGCR +Q+ + S+P E+ + I E+ V + + D GN+VVQK +
Sbjct: 1004 QQVKGHVLPLALQMYGCRVIQKALESIPAEQQQEIVRELDGHVLKCVKDQNGNHVVQKCI 1063
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + + L D F+ L+TH G R + ++LE+ T P+Q + +LA L
Sbjct: 1064 E-CVDP----VALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHCT-PEQTAPILAELHAN 1117
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED L+ V ++ K V++ CV ++ A
Sbjct: 1118 TEHLIQDQYGNYVIQHVLEHGKPEDKSALIASVRGKVLILSQHKFASNVVEKCVTHATRA 1177
Query: 327 QRERLVAEIIA----NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+R L+ E+ + ++ +D Y NYVVQ ++ + P LL ++ H S
Sbjct: 1178 ERALLIEEVCSFNDSGLHVMMKDQYANYVVQKMIDVSEPTQRKVLLHKIRPHMNSLKKYT 1237
Query: 383 YGSNVVER 390
YG +++ +
Sbjct: 1238 YGKHIIAK 1245
Score = 72.8 bits (177), Expect = 4e-10, Method: Composition-based stats.
Identities = 52/186 (27%), Positives = 93/186 (50%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + + NE+ Y
Sbjct: 916 RLLEDFRNQRYPNLQLRDLTNHIVEFSQDQHGSRFIQQKLERAISVEKQLVFNEILGAAY 975
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q++ L ++ + L LA YG V+Q L +
Sbjct: 976 SLMTDVFGNYVIQKFFEFGSPEQKQALAQQVKGHVLPLALQMYGCRVIQKALESIPAEQQ 1035
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + + + II+ R+ V L HP+G
Sbjct: 1036 QEIVRELDGHVLKCVKDQNGNHVVQKC-IECVDPVALQFIIDAFRN-QVYSLSTHPYGCR 1093
Query: 425 VIQSAL 430
VIQ L
Sbjct: 1094 VIQRIL 1099
Score = 40.4 bits (93), Expect = 1.9, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 61/133 (45%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +L N L +DQYG +Q + E+ + V +V L F + VV+K
Sbjct: 1111 LAELHANTEHLIQDQYGNYVIQHVLEHGKPEDKSALIASVRGKVLILSQHKFASNVVEKC 1170
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + +R ++ + + + + + + V++ + +++ P Q ++L +RP
Sbjct: 1171 VTHATRAERALLIEEVCSFNDSGLHVMMKDQYANYVVQKMIDVSEPTQRKVLLHKIRPHM 1230
Query: 268 VTLTKDTNGHYVI 280
+L K T G ++I
Sbjct: 1231 NSLKKYTYGKHII 1243
>gi|406861814|gb|EKD14867.1| pumilio domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 948
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 151/287 (52%), Gaps = 13/287 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRD+ ++V + DQ+G R +Q + + +E E +F E+ +LM D FGNYV+QKL
Sbjct: 543 LRDIYNHVVEFSGDQHGSRFIQNRLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKL 602
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + N ++ + L +G R V K LE++ QQ L LR
Sbjct: 603 FEHGNQVQKRVLAEQMKN---HVLELSLQMYGCRVVQKALEHVLADQQAELA-QELRADV 658
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q ++ E ++++ + +A GC V+Q +EY K +
Sbjct: 659 LKCVKDQNGNHVVQKAIERVPTEHVRFIIEAFRGQVHTLAVHPYGCRVIQRILEYCKPHE 718
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ ++ E+ +L D YGNYV QH++ P+ A ++R + + S +K+ SNV
Sbjct: 719 QVGILEELHQCTAMLITDQYGNYVTQHVIEHGQPEDQAKVIRIVTSQLLELSKHKFASNV 778
Query: 388 VERCLLESGEEQSTRIIIELLR-------SPNVSMLLMHPFGNYVIQ 427
VE+C +E G + R I+ + SP + +++ P+GNYVIQ
Sbjct: 779 VEKC-IEFGTHEQRRAIVNTVNHVHSNGISP-LQLMIKDPYGNYVIQ 823
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 102/214 (47%), Gaps = 11/214 (5%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++ +++ L+ YGCR +Q+ + + ++ + E+ V + + D GN+VVQK +E
Sbjct: 618 MKNHVLELSLQMYGCRVVQKALEHVLADQQAELAQELRADVLKCVKDQNGNHVVQKAIER 677
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E I+ Q+ + ++ +G R + ++LE +Q+ +L L L
Sbjct: 678 VPTEHVRFIIEAFRG---QVHTLAVHPYGCRVIQRILEYCKPHEQVG-ILEELHQCTAML 733
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
D G+YV Q+ ++H ED ++ V ++ K V++ C+E+ QR
Sbjct: 734 ITDQYGNYVTQHVIEHGQPEDQAKVIRIVTSQLLELSKHKFASNVVEKCIEFGTHEQRRA 793
Query: 331 LVAEI-------IANALLLAEDCYGNYVVQHLLA 357
+V + I+ L+ +D YGNYV+Q ++
Sbjct: 794 IVNTVNHVHSNGISPLQLMIKDPYGNYVIQRIIG 827
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S + KY L ++ ++ + D+ G +Q+ +E + ++E+L EI NAL L D +
Sbjct: 535 SKANKKYELRDIYNHVVEFSGDQHGSRFIQNRLETANSDEKEQLFREIQPNALQLMTDVF 594
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYV+Q L L Q++ H + S YG VV++ L +Q + EL
Sbjct: 595 GNYVIQKLFEHGNQVQKRVLAEQMKNHVLELSLQMYGCRVVQKALEHVLADQQAELAQEL 654
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
+V + GN+V+Q A+
Sbjct: 655 RA--DVLKCVKDQNGNHVVQKAI 675
>gi|296224411|ref|XP_002758049.1| PREDICTED: pumilio homolog 2 isoform 2 [Callithrix jacchus]
Length = 1064
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 707 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 766
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 767 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 823
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 824 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 882
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 883 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 942
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 943 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 1002
Query: 426 IQSAL 430
+Q +
Sbjct: 1003 VQKMI 1007
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 799 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 857
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 858 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 912
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 913 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 972
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 973 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 1032
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1033 TYGKHILAK 1041
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 871 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 930
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 931 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 989
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 990 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1046
>gi|383417007|gb|AFH31717.1| pumilio homolog 2 [Macaca mulatta]
Length = 1060
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 703 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 762
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 763 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 819
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 820 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 878
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 879 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 938
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 939 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 998
Query: 426 IQSAL 430
+Q +
Sbjct: 999 VQKMI 1003
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 795 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 853
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 854 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 908
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 909 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 968
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 969 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 1028
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1029 TYGKHILAK 1037
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 867 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 926
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 927 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 985
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 986 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1042
>gi|390179095|ref|XP_003736802.1| GA30209, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|388859710|gb|EIM52875.1| GA30209, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 1531
Score = 149 bits (376), Expect = 3e-33, Method: Composition-based stats.
Identities = 86/289 (29%), Positives = 153/289 (52%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK
Sbjct: 1100 LRDLLNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKF 1159
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+ + + + QL L +G R + K LE+++ P+Q ++ L
Sbjct: 1160 FEFGTPEQKNTLGMQVKGHVLQLA---LQMYGCRVIQKALESIS-PEQQQEIVHELDGHV 1215
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++N Y ++T GC V+Q +E+ Q
Sbjct: 1216 LKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQ 1275
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ N L +D YGNYV+QH+L + + L+ + G + S +K+ SNV
Sbjct: 1276 TTPILDELHENTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNV 1335
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + T +I E+ + +++ + NYV+Q + VS+
Sbjct: 1336 VEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSE 1384
Score = 101 bits (252), Expect = 6e-19, Method: Composition-based stats.
Identities = 70/243 (28%), Positives = 125/243 (51%), Gaps = 12/243 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +E
Sbjct: 1175 VKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIE- 1233
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + + L + F+ L+TH G R + ++LE+ T +Q + +L L
Sbjct: 1234 CVDP----VALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCT-AEQTTPILDELHENTE 1288
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED L+N V ++ K V++ CV ++ +R
Sbjct: 1289 QLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGER 1348
Query: 329 ERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H + YG
Sbjct: 1349 TGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMTALRKYTYG 1408
Query: 385 SNV 387
++
Sbjct: 1409 KHI 1411
Score = 68.9 bits (167), Expect = 5e-09, Method: Composition-based stats.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + + + +E+ Y
Sbjct: 1085 RLLEDFRNQRYPNLQLRDLLNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAY 1144
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q+ L ++ + L LA YG V+Q L P+
Sbjct: 1145 SLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQ 1204
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++ +L+GH + ++ G++VV++C +E + + + II + V L HP+G
Sbjct: 1205 QEIVHELDGHVLKCVKDQNGNHVVQKC-IECVDPVALQFIINAFKG-QVYSLSTHPYGCR 1262
Query: 425 VIQSAL 430
VIQ L
Sbjct: 1263 VIQRIL 1268
Score = 41.6 bits (96), Expect = 0.85, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 61/132 (46%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +L N L +DQYG +Q + +E+ ++ V +V L F + VV+K
Sbjct: 1280 LDELHENTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 1339
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + +RT ++ + + + + + V++ + +++ P Q+ ++ +RP
Sbjct: 1340 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHM 1399
Query: 268 VTLTKDTNGHYV 279
L K T G ++
Sbjct: 1400 TALRKYTYGKHI 1411
>gi|302410901|ref|XP_003003284.1| pumilio domain-containing protein [Verticillium albo-atrum
VaMs.102]
gi|261358308|gb|EEY20736.1| pumilio domain-containing protein [Verticillium albo-atrum
VaMs.102]
Length = 852
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 155/289 (53%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G++V + DQ+G R +Q+ + + +E + IF E+ +LM D FGNYV+QK
Sbjct: 449 LKDIYGHVVEFSGDQHGSRFIQQKLETANSDEKDQIFREIEPNAVQLMKDVFGNYVIQKF 508
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + ++V + + + R V K LE++ QQ LV L+P
Sbjct: 509 FEHGNQVQKKVLAAQMKG---KVVDLSMQMYACRVVQKALEHVLVEQQAELV-DELQPDI 564
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V + KD NG++V+Q ++ + ++++ +A GC V+Q +EY
Sbjct: 565 VKVVKDQNGNHVVQKVIELVPRQYIDFVMDSFRGQVSQLAAHTYGCRVIQRMLEYGTDQD 624
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+E ++ E+ +A +L D YGNYV QH++ P+ A ++ + V+ S +K+ SNV
Sbjct: 625 KEVILTELHNSAQVLITDQYGNYVTQHVIQHGKPEDRAKMIHLVTSQLVTLSKHKFASNV 684
Query: 388 VERCLLESGEEQSTRIIIELLRS--PN----VSMLLMHPFGNYVIQSAL 430
VE+C +E G + + I E L + P+ + +++ +GNYVIQ L
Sbjct: 685 VEKC-IEHGSPEERKSIREQLTTMGPDGTSPLQLMMKDQYGNYVIQKLL 732
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 9/171 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ RG + LA YGCR +QR + ++ E+I E+ + L+ D +GNYV Q +
Sbjct: 593 MDSFRGQVSQLAAHTYGCRVIQRMLEYGTDQDKEVILTELHNSAQVLITDQYGNYVTQHV 652
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISL--VLAALRP 265
++ E R +++ ++T+ QLV + + V K +E+ + ++ S+ L + P
Sbjct: 653 IQHGKPEDRAKMIHLVTS---QLVTLSKHKFASNVVEKCIEHGSPEERKSIREQLTTMGP 709
Query: 266 GAVT----LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSG 312
+ + KD G+YVIQ + D + + E+ + +G
Sbjct: 710 DGTSPLQLMMKDQYGNYVIQKLLNQLDGGDREAFIEEMKPQFIALKKTSTG 760
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S + +Y L ++ + + D+ G +Q +E + +++++ EI NA+ L +D +
Sbjct: 441 SKSNKRYDLKDIYGHVVEFSGDQHGSRFIQQKLETANSDEKDQIFREIEPNAVQLMKDVF 500
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYV+Q L Q++G V S Y VV++ L EQ ++ EL
Sbjct: 501 GNYVIQKFFEHGNQVQKKVLAAQMKGKVVDLSMQMYACRVVQKALEHVLVEQQAELVDEL 560
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
P++ ++ GN+V+Q +
Sbjct: 561 --QPDIVKVVKDQNGNHVVQKVI 581
>gi|227204207|dbj|BAH56955.1| AT4G25880 [Arabidopsis thaliana]
Length = 806
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 158/309 (51%), Gaps = 22/309 (7%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G+IV + DQ+G R +Q+ + + EE +F E++ C+LM D FGNYV+QK
Sbjct: 473 LSDITGHIVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKF 532
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + QR + L Q+V + L +G R + K L+ + Q++ L L
Sbjct: 533 FEYGNSTQRKELADQLMG---QIVPL-LQMYGCRVIQKALDVIEPDQRVRLA-RELDGQV 587
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ C+++ + ++L ++ GC V+Q +E
Sbjct: 588 MRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDH 647
Query: 328 RERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ R + EI+ + +L++D YGNYV QH+L + + R+L GH V S +K+ SN
Sbjct: 648 QCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASN 707
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVS-----MLLMHPFGNYVIQSAL----------L 431
V+E+C LE G +II+ + P+ S M++ +GNYV+Q L
Sbjct: 708 VIEKC-LEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRLTL 766
Query: 432 VSKVRLFSS 440
S+VR+ +S
Sbjct: 767 FSRVRMHAS 775
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 3/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LE L + + L+ + V + D +G IQ +++ E+ + E+ +
Sbjct: 459 FLEELKSGKGRRFDLSDITGHIVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACK 518
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q EY QR+ L +++ + L + YG V+Q L + P
Sbjct: 519 LMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLLQ-MYGCRVIQKALDVIEPDQRV 577
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
L R+L+G + ++ G++V+++C +E+ ++ R VS L MHP+G V
Sbjct: 578 RLARELDGQVMRCVRDQNGNHVIQKC-IENIPADKVGFMLYAFRG-QVSSLSMHPYGCRV 635
Query: 426 IQSAL 430
IQ L
Sbjct: 636 IQRLL 640
>gi|383417009|gb|AFH31718.1| pumilio homolog 2 [Macaca mulatta]
Length = 1059
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 702 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 761
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 762 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 818
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 819 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 877
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 878 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 937
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 938 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 997
Query: 426 IQSAL 430
+Q +
Sbjct: 998 VQKMI 1002
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 794 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 852
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 853 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 907
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 908 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 967
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 968 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 1027
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1028 TYGKHILAK 1036
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 866 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 925
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 926 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 984
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 985 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1041
>gi|346971293|gb|EGY14745.1| pumilio domain-containing protein [Verticillium dahliae VdLs.17]
Length = 825
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 155/289 (53%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G++V + DQ+G R +Q+ + + +E + IF E+ +LM D FGNYV+QK
Sbjct: 422 LKDIYGHVVEFSGDQHGSRFIQQKLETANSDEKDQIFREIEPNAVQLMKDVFGNYVIQKF 481
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + ++V + + + R V K LE++ QQ LV L+P
Sbjct: 482 FEHGNQVQKKVLAAQMKG---KVVDLSMQMYACRVVQKALEHVLVEQQAELV-DELQPDI 537
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V + KD NG++V+Q ++ + ++++ +A GC V+Q +EY
Sbjct: 538 VKVVKDQNGNHVVQKVIELVPRQYIDFVMDSFRGQVSQLAAHTYGCRVIQRMLEYGTDQD 597
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+E ++ E+ +A +L D YGNYV QH++ P+ A ++ + V+ S +K+ SNV
Sbjct: 598 KEVILTELHNSAQVLITDQYGNYVTQHVIQHGKPEDRAKMIHLVTSQLVTLSKHKFASNV 657
Query: 388 VERCLLESGEEQSTRIIIELLRS--PN----VSMLLMHPFGNYVIQSAL 430
VE+C +E G + + I E L + P+ + +++ +GNYVIQ L
Sbjct: 658 VEKC-IEHGSPEERKSIREQLTTMGPDGTSPLQLMMKDQYGNYVIQKLL 705
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 9/171 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ RG + LA YGCR +QR + ++ E+I E+ + L+ D +GNYV Q +
Sbjct: 566 MDSFRGQVSQLAAHTYGCRVIQRMLEYGTDQDKEVILTELHNSAQVLITDQYGNYVTQHV 625
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISL--VLAALRP 265
++ E R +++ ++T+ QLV + + V K +E+ + ++ S+ L + P
Sbjct: 626 IQHGKPEDRAKMIHLVTS---QLVTLSKHKFASNVVEKCIEHGSPEERKSIREQLTTMGP 682
Query: 266 GAVT----LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSG 312
+ + KD G+YVIQ + D + + E+ + +G
Sbjct: 683 DGTSPLQLMMKDQYGNYVIQKLLNQLDGADREAFIEEMKPQFIALKKTSTG 733
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S + +Y L ++ + + D+ G +Q +E + +++++ EI NA+ L +D +
Sbjct: 414 SKSNKRYDLKDIYGHVVEFSGDQHGSRFIQQKLETANSDEKDQIFREIEPNAVQLMKDVF 473
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYV+Q L Q++G V S Y VV++ L EQ ++ EL
Sbjct: 474 GNYVIQKFFEHGNQVQKKVLAAQMKGKVVDLSMQMYACRVVQKALEHVLVEQQAELVDEL 533
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
P++ ++ GN+V+Q +
Sbjct: 534 --QPDIVKVVKDQNGNHVVQKVI 554
>gi|189242503|ref|XP_967865.2| PREDICTED: similar to pumilio [Tribolium castaneum]
Length = 718
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 155/289 (53%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK
Sbjct: 374 LRDLANHIVEFSQDQHGSRFIQQKLERASATEKQMVFNEILSAAYNLMTDVFGNYVIQKF 433
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+T + + ++ + L +G R + K LE++ P+Q ++ L
Sbjct: 434 FEFGTAEQKTTLAQKVRG---HVLPLALQMYGCRVIQKALESIP-PEQQQEIVRELDGHV 489
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++ + Y ++T GC V+Q +E+ Q
Sbjct: 490 LKCVKDQNGNHVVQKCIECVDPNALQFIIQSFSGQVYTLSTHPYGCRVIQRILEHCTPEQ 549
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++AE+ + L +D +GNYV+QH+L P+ + L+ + G ++ S +K+ SNV
Sbjct: 550 TAPILAELHQHTDQLIQDQFGNYVIQHVLEHGKPEDKSQLISSVRGKVLALSQHKFASNV 609
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ + +++ + NYV+Q + VS+
Sbjct: 610 VEKCVTHATRAERALLIEEVCGFNDNALHVMMKDQYANYVVQKMIDVSE 658
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 129/246 (52%), Gaps = 8/246 (3%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ +RG+++ LA YGCR +Q+ + S+P E+ + I E+ V + + D GN+VVQK +
Sbjct: 447 QKVRGHVLPLALQMYGCRVIQKALESIPPEQQQEIVRELDGHVLKCVKDQNGNHVVQKCI 506
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
E I+ + Q+ + + +G R + ++LE+ T P+Q + +LA L
Sbjct: 507 ECVDPNALQFIIQSFSG---QVYTLSTHPYGCRVIQRILEHCT-PEQTAPILAELHQHTD 562
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED L++ V ++ K V++ CV ++ A+R
Sbjct: 563 QLIQDQFGNYVIQHVLEHGKPEDKSQLISSVRGKVLALSQHKFASNVVEKCVTHATRAER 622
Query: 329 ERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H S YG
Sbjct: 623 ALLIEEVCGFNDNALHVMMKDQYANYVVQKMIDVSEPTQRKVLMHKIRPHLNSLRKYTYG 682
Query: 385 SNVVER 390
+++ +
Sbjct: 683 KHIIAK 688
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 8/220 (3%)
Query: 217 TRILLMLTNDDFQLVRICLNT------HGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
T + TN F + L+T G + +LLE+ N + +L L L V
Sbjct: 325 TNAMFGSTNSLFTKINSSLSTVPSSLDKGQQGRSRLLEDFRNNRYPNLQLRDLANHIVEF 384
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
++D +G IQ ++ S + + + NE+ Y + TD G V+Q E+ Q+
Sbjct: 385 SQDQHGSRFIQQKLERASATEKQMVFNEILSAAYNLMTDVFGNYVIQKFFEFGTAEQKTT 444
Query: 331 LVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
L ++ + L LA YG V+Q L P+ ++R+L+GH + ++ G++VV++
Sbjct: 445 LAQKVRGHVLPLALQMYGCRVIQKALESIPPEQQQEIVRELDGHVLKCVKDQNGNHVVQK 504
Query: 391 CLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
C +E + + + II+ S V L HP+G VIQ L
Sbjct: 505 C-IECVDPNALQFIIQSF-SGQVYTLSTHPYGCRVIQRIL 542
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/176 (19%), Positives = 68/176 (38%), Gaps = 36/176 (20%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYV---- 203
++ G + L+ YGCR +QR + E+ I E+ +L+ D FGNYV
Sbjct: 518 IQSFSGQVYTLSTHPYGCRVIQRILEHCTPEQTAPILAELHQHTDQLIQDQFGNYVIQHV 577
Query: 204 --------------------------------VQKLVELCSEEQRTRILLMLTNDDFQLV 231
V+K V + +R ++ + + +
Sbjct: 578 LEHGKPEDKSQLISSVRGKVLALSQHKFASNVVEKCVTHATRAERALLIEEVCGFNDNAL 637
Query: 232 RICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
+ + V++ + +++ P Q +++ +RP +L K T G ++I K+F
Sbjct: 638 HVMMKDQYANYVVQKMIDVSEPTQRKVLMHKIRPHLNSLRKYTYGKHIIAKLEKYF 693
>gi|149727740|ref|XP_001503365.1| PREDICTED: pumilio homolog 2 [Equus caballus]
Length = 1063
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 706 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 765
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 766 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 822
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 823 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 881
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 882 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 941
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 942 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 1001
Query: 426 IQSAL 430
+Q +
Sbjct: 1002 VQKMI 1006
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 798 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 856
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 857 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 911
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 912 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 971
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 972 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 1031
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1032 TYGKHILAK 1040
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 870 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 929
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 930 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 988
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 989 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1045
>gi|350582680|ref|XP_003125422.3| PREDICTED: pumilio homolog 2 isoform 1 [Sus scrofa]
Length = 1060
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 703 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 762
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 763 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 819
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 820 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 878
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 879 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 938
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 939 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 998
Query: 426 IQSAL 430
+Q +
Sbjct: 999 VQKMI 1003
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 795 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 853
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 854 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 908
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 909 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 968
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 969 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 1028
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1029 TYGKHILAK 1037
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 867 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 926
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 927 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 985
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 986 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1042
>gi|291387142|ref|XP_002710095.1| PREDICTED: pumilio homolog 2-like isoform 2 [Oryctolagus cuniculus]
Length = 1065
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 708 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 767
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 768 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 824
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 825 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 883
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 884 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 943
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 944 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQSDGPHSALYTMMKDQYANYV 1003
Query: 426 IQSAL 430
+Q +
Sbjct: 1004 VQKMI 1008
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 800 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 858
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 859 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 913
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 914 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 973
Query: 329 ERLVAEIIANA-------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 974 ALLIDEVCCQSDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 1033
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1034 TYGKHILAK 1042
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 872 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 931
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 932 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQSDGPHSA 990
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 991 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1047
>gi|297668109|ref|XP_002812297.1| PREDICTED: pumilio homolog 2 isoform 2 [Pongo abelii]
Length = 1065
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 708 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 767
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 768 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 824
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 825 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 883
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 884 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 943
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 944 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 1003
Query: 426 IQSAL 430
+Q +
Sbjct: 1004 VQKMI 1008
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 800 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 858
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 859 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 913
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 914 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 973
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 974 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 1033
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1034 TYGKHILAK 1042
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 872 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 931
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 932 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 990
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 991 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1047
>gi|380811084|gb|AFE77417.1| pumilio homolog 2 [Macaca mulatta]
gi|383417013|gb|AFH31720.1| pumilio homolog 2 [Macaca mulatta]
gi|384946088|gb|AFI36649.1| pumilio homolog 2 [Macaca mulatta]
Length = 1065
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 708 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 767
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 768 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 824
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 825 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 883
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 884 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 943
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 944 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 1003
Query: 426 IQSAL 430
+Q +
Sbjct: 1004 VQKMI 1008
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ + E+
Sbjct: 778 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELD 837
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 838 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 892
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 893 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 951
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 952 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMA 1011
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1012 EPAQRKIIMHKIRPHITTLRKYTYGKHILAK 1042
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 872 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 931
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 932 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 990
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 991 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1047
>gi|332253819|ref|XP_003276029.1| PREDICTED: pumilio homolog 2 isoform 2 [Nomascus leucogenys]
Length = 1009
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 652 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 711
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 712 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 768
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 769 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 827
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 828 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 887
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 888 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 947
Query: 426 IQSAL 430
+Q +
Sbjct: 948 VQKMI 952
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ + E+
Sbjct: 722 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELD 781
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 782 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 836
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 837 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 895
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 896 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMA 955
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 956 EPAQRKIIMHKIRPHITTLRKYTYGKHILAK 986
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + L+ YGCR +QR + E+ I E+ +L+
Sbjct: 810 QFIIDAF--------KGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ 861
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L L+ F +V C+ TH RA
Sbjct: 862 DQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALL 920
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +++ +RP TL K T G
Sbjct: 921 IDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYG 980
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 981 KHILAKLEKYY 991
>gi|73979795|ref|XP_849088.1| PREDICTED: pumilio homolog 2 isoform 1 [Canis lupus familiaris]
Length = 1063
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 706 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 765
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 766 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 822
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 823 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 881
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 882 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 941
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 942 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 1001
Query: 426 IQSAL 430
+Q +
Sbjct: 1002 VQKMI 1006
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 798 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 856
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 857 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 911
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 912 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 971
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 972 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 1031
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1032 TYGKHILAK 1040
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 870 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 929
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 930 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 988
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 989 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1045
>gi|395828861|ref|XP_003787581.1| PREDICTED: pumilio homolog 2 [Otolemur garnettii]
Length = 1027
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 157/288 (54%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL G+IV ++DQ+G R +Q+ + E +M+F E++ +LM D FGNYV+QK
Sbjct: 725 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 784
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S +Q+ L + T ++ + L +G R + K LE++++ QQ +V L
Sbjct: 785 FEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMV-KELDGHV 840
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 841 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ 900
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G ++ S +K+ SNV
Sbjct: 901 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 960
Query: 388 VERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYVIQSAL 430
VE+C+ + + +I E+ P+ ++ M + NYV+Q +
Sbjct: 961 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI 1008
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 121/238 (50%), Gaps = 20/238 (8%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 800 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 858
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 859 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 913
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 914 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 973
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFS 379
L+ E+ + + +D Y NYVVQ ++ + P R++ H V FS
Sbjct: 974 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEP-----AQRKIIMHKVIFS 1026
>gi|342321718|gb|EGU13650.1| Hypothetical Protein RTG_00087 [Rhodotorula glutinis ATCC 204091]
Length = 949
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 157/301 (52%), Gaps = 13/301 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+DL G++V + DQ G RH+Q + + EE M+F E++ + +L D F NYV+QK
Sbjct: 587 LQDLAGHMVEFSGDQLGSRHIQTKLETATTEERNMVFKEILPNMLQLSTDVFANYVIQKF 646
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S+ Q+T + +L + ++++ L +G R V K LE + QQ+ LV L
Sbjct: 647 FEQGSQVQKTAMAKVL---EGHVLQLSLQMYGCRVVQKALEYVLVDQQVRLV-KELDGNV 702
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D ++VIQ ++ E ++ N + +AT GC VLQ E Q
Sbjct: 703 LKCARDAQSNHVIQRALERVPPEHLLFITNACVGEVHSLATHPYGCRVLQRIFENCPAHQ 762
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
L+ E+ + L +D YGNYVVQ +L + ++ ++ G + + K+ SNV
Sbjct: 763 TRTLLDELHRSTQHLIQDQYGNYVVQWVLEKGDTADRSLVIAKVYGQLLPLAQQKFASNV 822
Query: 388 VERCLLESGEEQSTRIIIELLR-----SPNVSMLLMHPFGNYVIQ----SALLVSKVRLF 438
VE+C+L +++ R+I E+L+ S + +L+HP+ NYVIQ SAL + LF
Sbjct: 823 VEKCILYGTDDERRRLIDEVLQTGHDGSSTIKAMLVHPYANYVIQKCLHSALSPQREALF 882
Query: 439 S 439
+
Sbjct: 883 A 883
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 98/218 (44%), Gaps = 13/218 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+++L GN++ A+D +QR + +P E + I + V L P+G V+Q++
Sbjct: 695 VKELDGNVLKCARDAQSNHVIQRALERVPPEHLLFITNACVGEVHSLATHPYGCRVLQRI 754
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E C Q +L L L++ + ++ VL+ + SLV+A +
Sbjct: 755 FENCPAHQTRTLLDELHRSTQHLIQDQYGNYVVQWVLEKGDTADR----SLVIAKVYGQL 810
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY-GIATDKS------GCCVLQHCV 320
+ L + V++ C+ + + ++ + L++EV + G +T K+ V+Q C+
Sbjct: 811 LPLAQQKFASNVVEKCILYGTDDERRRLIDEVLQTGHDGSSTIKAMLVHPYANYVIQKCL 870
Query: 321 EYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLAL 358
+ QRE L AE L L + Y +HL+ +
Sbjct: 871 HSALSPQREALFAETTQQILNLRK--YSTTYSKHLVTI 906
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S+ + + L ++A + + D+ G +Q +E + +R + EI+ N L L+ D +
Sbjct: 579 SNRNRSWELQDLAGHMVEFSGDQLGSRHIQTKLETATTEERNMVFKEILPNMLQLSTDVF 638
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
NYV+Q ++ + LEGH + S YG VV++ L +Q R++ EL
Sbjct: 639 ANYVIQKFFEQGSQVQKTAMAKVLEGHVLQLSLQMYGCRVVQKALEYVLVDQQVRLVKEL 698
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
NV N+VIQ AL
Sbjct: 699 --DGNVLKCARDAQSNHVIQRAL 719
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 2/182 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE + + S L L V + D G IQ ++ + E+ + E+ N
Sbjct: 573 LLEEFRSNRNRSWELQDLAGHMVEFSGDQLGSRHIQTKLETATTEERNMVFKEILPNMLQ 632
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
++TD V+Q E Q+ + + + L L+ YG VVQ L +
Sbjct: 633 LSTDVFANYVIQKFFEQGSQVQKTAMAKVLEGHVLQLSLQMYGCRVVQKALEYVLVDQQV 692
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
L+++L+G+ + + + ++V++R L E I + V L HP+G V
Sbjct: 693 RLVKELDGNVLKCARDAQSNHVIQRALERVPPEHLLFITNACVG--EVHSLATHPYGCRV 750
Query: 426 IQ 427
+Q
Sbjct: 751 LQ 752
>gi|168030468|ref|XP_001767745.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681065|gb|EDQ67496.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1148
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 160/306 (52%), Gaps = 14/306 (4%)
Query: 135 RNQWLQDSFDCSSLR-----DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVID 189
R L + F S R D+ G++V + DQ+G R +Q+ + + E+ M+F EV+
Sbjct: 781 RGSTLLEEFKNSKTRRFELSDIAGHVVEFSADQHGSRFIQQKLETATLEDKNMVFQEVLP 840
Query: 190 RVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLEN 249
R LM D FGNYV+QK E + +QR + L + Q++ + L +G R + K LE
Sbjct: 841 RALVLMTDVFGNYVIQKFFEHGTHQQRRELASKL---EGQVLVLSLQMYGCRVIQKALEV 897
Query: 250 LTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATD 309
+ QQ LV + L + +D NG++VIQ C++ ++++ + ++T
Sbjct: 898 VDVDQQTQLV-SELDGNVMRCVRDQNGNHVIQKCIECVPPAKIHFIISAFYNQVVTLSTH 956
Query: 310 KSGCCVLQHCVEYSKGAQRER-LVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLL 368
GC V+Q +E+ Q+++ ++ EI+ + LA+D YGNYVVQH+L + ++
Sbjct: 957 PYGCRVIQRVLEHCTDEQKQKGIMEEILRSTCTLAQDQYGNYVVQHVLEHGRDHERSEII 1016
Query: 369 RQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL----RSPNVSMLLMHPFGNY 424
+L G V S +K+ SNVVE+CL G + +I E+L + + ++ F NY
Sbjct: 1017 TKLAGQIVQMSQHKFASNVVEKCLEYGGPVERQILIDEMLGLTDENEPLQAMMKDQFANY 1076
Query: 425 VIQSAL 430
V+Q L
Sbjct: 1077 VVQKVL 1082
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ + E +++ E++ E +M D F N
Sbjct: 1016 ITKLAGQIVQMSQHKFASNVVEKCLEYGGPVERQILIDEMLGLTDENEPLQAMMKDQFAN 1075
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C E QR +L + L + H + V KL+
Sbjct: 1076 YVVQKVLETCDESQRELLLGRIRVHLHALKKYTYGKHIVARVEKLV 1121
>gi|403288165|ref|XP_003935283.1| PREDICTED: pumilio homolog 2 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1066
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 709 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 768
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 769 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 825
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 826 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 884
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 885 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 944
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 945 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 1004
Query: 426 IQSAL 430
+Q +
Sbjct: 1005 VQKMI 1009
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ + E+
Sbjct: 779 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELD 838
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 839 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 893
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 894 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 952
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 953 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMA 1012
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1013 EPAQRKIIMHKIRPHITTLRKYTYGKHILAK 1043
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 873 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 932
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 933 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 991
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 992 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1048
>gi|332253817|ref|XP_003276028.1| PREDICTED: pumilio homolog 2 isoform 1 [Nomascus leucogenys]
Length = 1065
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 708 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 767
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 768 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 824
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 825 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 883
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 884 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 943
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 944 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 1003
Query: 426 IQSAL 430
+Q +
Sbjct: 1004 VQKMI 1008
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ + E+
Sbjct: 778 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELD 837
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 838 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 892
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 893 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 951
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 952 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMA 1011
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1012 EPAQRKIIMHKIRPHITTLRKYTYGKHILAK 1042
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 872 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 931
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 932 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 990
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 991 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1047
>gi|291387144|ref|XP_002710096.1| PREDICTED: pumilio homolog 2-like isoform 3 [Oryctolagus cuniculus]
Length = 1009
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 652 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 711
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 712 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 768
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 769 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 827
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 828 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 887
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 888 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQSDGPHSALYTMMKDQYANYV 947
Query: 426 IQSAL 430
+Q +
Sbjct: 948 VQKMI 952
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ + E+
Sbjct: 722 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELD 781
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 782 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 836
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 837 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 895
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIANA-------LLLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 896 SQHKFASNVVEKCVTHASRAERALLIDEVCCQSDGPHSALYTMMKDQYANYVVQKMIDMA 955
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 956 EPAQRKIIMHKIRPHITTLRKYTYGKHILAK 986
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + L+ YGCR +QR + E+ I E+ +L+
Sbjct: 810 QFIIDAF--------KGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ 861
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L L+ F +V C+ TH RA
Sbjct: 862 DQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALL 920
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +++ +RP TL K T G
Sbjct: 921 IDEVCCQSDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYG 980
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 981 KHILAKLEKYY 991
>gi|417405515|gb|JAA49467.1| Putative rna-binding protein of the puf family [Desmodus rotundus]
Length = 985
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 628 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 687
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 688 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 744
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 745 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 803
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 804 YGCRVIQRILEHCTAEQTLPVLEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 863
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 864 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 923
Query: 426 IQSAL 430
IQ +
Sbjct: 924 IQKMI 928
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 720 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 778
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + VL L
Sbjct: 779 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-VLEELHQHTE 833
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 834 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 893
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYV+Q ++ + P ++ ++ H +
Sbjct: 894 ALLIDEVCCQNDGPHSALYTMMKDQYANYVIQKMIDMAEPAQRKIIMHKIRPHITTLRKY 953
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 954 TYGKHILAK 962
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ + E+ +L+ D +GNYV+Q ++E
Sbjct: 792 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPVLEELHQHTEQLVQDQYGNYVIQHVLEH 851
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 852 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 910
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 911 LYTMMKDQYANYVIQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 967
>gi|13491168|ref|NP_056132.1| pumilio homolog 2 [Homo sapiens]
gi|11139704|gb|AAG31806.1|AF315591_1 Pumilio 2 [Homo sapiens]
gi|20521854|dbj|BAA19665.3| KIAA0235 protein [Homo sapiens]
gi|62822478|gb|AAY15026.1| unknown [Homo sapiens]
gi|85566710|gb|AAI12047.1| Pumilio homolog 2 (Drosophila) [Homo sapiens]
gi|85567007|gb|AAI12049.1| Pumilio homolog 2 [Homo sapiens]
gi|119621226|gb|EAX00821.1| pumilio homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
gi|119621228|gb|EAX00823.1| pumilio homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
gi|168267226|dbj|BAG09669.1| pumilio homolog 2 [synthetic construct]
gi|193787566|dbj|BAG52772.1| unnamed protein product [Homo sapiens]
Length = 1064
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 707 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 766
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 767 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 823
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 824 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 882
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 883 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 942
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 943 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 1002
Query: 426 IQSAL 430
+Q +
Sbjct: 1003 VQKMI 1007
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ + E+
Sbjct: 777 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELD 836
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 837 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 891
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 892 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 950
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 951 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMA 1010
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1011 EPAQRKIIMHKIRPHITTLRKYTYGKHILAK 1041
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 871 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 930
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 931 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 989
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 990 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1046
>gi|301758394|ref|XP_002915042.1| PREDICTED: pumilio homolog 2-like [Ailuropoda melanoleuca]
Length = 1064
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 707 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 766
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 767 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 823
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 824 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 882
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 883 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 942
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 943 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 1002
Query: 426 IQSAL 430
+Q +
Sbjct: 1003 VQKMI 1007
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 799 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 857
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 858 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 912
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 913 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 972
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 973 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 1032
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1033 TYGKHILAK 1041
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 871 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 930
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 931 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 989
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 990 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1046
>gi|114576339|ref|XP_001140678.1| PREDICTED: pumilio homolog 2 isoform 10 [Pan troglodytes]
gi|397513515|ref|XP_003827058.1| PREDICTED: pumilio homolog 2 isoform 1 [Pan paniscus]
gi|426334841|ref|XP_004028945.1| PREDICTED: pumilio homolog 2 isoform 1 [Gorilla gorilla gorilla]
gi|410258976|gb|JAA17454.1| pumilio homolog 2 [Pan troglodytes]
gi|410298912|gb|JAA28056.1| pumilio homolog 2 [Pan troglodytes]
gi|410335699|gb|JAA36796.1| pumilio homolog 2 [Pan troglodytes]
Length = 1065
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 708 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 767
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 768 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 824
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 825 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 883
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 884 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 943
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 944 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 1003
Query: 426 IQSAL 430
+Q +
Sbjct: 1004 VQKMI 1008
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ + E+
Sbjct: 778 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELD 837
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 838 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 892
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 893 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 951
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 952 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMA 1011
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1012 EPAQRKIIMHKIRPHITTLRKYTYGKHILAK 1042
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 872 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 931
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 932 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 990
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 991 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1047
>gi|185132391|ref|NP_001117710.1| pumilio-2 [Oncorhynchus mykiss]
gi|90991428|dbj|BAE93116.1| pumilio-2A [Oncorhynchus mykiss]
Length = 1184
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 169/316 (53%), Gaps = 13/316 (4%)
Query: 121 SVPRNQWMSSLSLKRNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLP 176
S PR + R++ L+D F LRDL G++V ++DQ+G R +Q+ +
Sbjct: 813 SRPRYSRSDVMPSGRSRLLEDFRNNRFPNLQLRDLPGHMVEFSQDQHGSRFIQQKLERAT 872
Query: 177 KEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLN 236
E +M+F E++ +LM D FGNYV+QK E S +Q+ L + T ++ + L
Sbjct: 873 PAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSADQK---LALATRIRGHVLPLALQ 929
Query: 237 THGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLL 296
+G R + K LE++++ QQ S ++ L + KD NG++V+Q C++ + ++++
Sbjct: 930 MYGCRVIQKALESISSDQQ-SDIVRELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFII 988
Query: 297 NEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLL 356
+ + ++T GC V+Q +E+ Q ++ E+ ++ L +D YGNYV+QH+L
Sbjct: 989 DAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHSEQLGQDQYGNYVIQHVL 1048
Query: 357 ALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL---LRSPNV 413
P+ + ++ ++ G + S +K+ SNVVE+C++ S + +I E+ P+
Sbjct: 1049 EHGRPEDKSKIVAEVRGKVLLLSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHS 1108
Query: 414 SMLLM--HPFGNYVIQ 427
++ M + NYV+Q
Sbjct: 1109 ALYTMMKDQYANYVVQ 1124
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 113/250 (45%), Gaps = 51/250 (20%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ I E+ V + + D GN+VVQK +E
Sbjct: 919 IRGHVLPLALQMYGCRVIQKALESISSDQQSDIVRELDGHVLKCVKDQNGNHVVQKCIE- 977
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D FQ L+TH G R + ++LE+ T Q + +L L +
Sbjct: 978 CVQPQALQFII----DAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLP-ILEELHQHSE 1032
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV----------------ADNC--------- 303
L +D G+YVIQ+ ++H ED ++ EV + C
Sbjct: 1033 QLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLLLSQHKFASNVVEKCVIHSSRAER 1092
Query: 304 ------------------YGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAED 345
Y + D+ V+Q ++ ++ AQR+ ++ +I + L +
Sbjct: 1093 ALLIDEVCCQKDGPHSALYTMMKDQYANYVVQRMIDMAEPAQRKIIMHKIRPHIATLRKY 1152
Query: 346 CYGNYVVQHL 355
YG +++ L
Sbjct: 1153 TYGKHILAKL 1162
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + +E+ I E+ +L D +GNYV+Q ++E
Sbjct: 991 FQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHSEQLGQDQYGNYVIQHVLEH 1050
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L+L+ F +V C+ H RA
Sbjct: 1051 GRPEDKSKIVAEVRGKVLLLSQHKFASNVVEKCV-IHSSRAERALLIDEVCCQKDGPHSA 1109
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 1110 LYTMMKDQYANYVVQRMIDMAEPAQRKIIMHKIRPHIATLRKYTYGKHILAKLEKYY 1166
>gi|358414521|ref|XP_003582858.1| PREDICTED: pumilio homolog 2 [Bos taurus]
gi|359070244|ref|XP_002691562.2| PREDICTED: pumilio homolog 2 isoform 1 [Bos taurus]
Length = 1007
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 650 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 709
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 710 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 766
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 767 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 825
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 826 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 885
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 886 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 945
Query: 426 IQSAL 430
+Q +
Sbjct: 946 VQKMI 950
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ + E+
Sbjct: 720 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELD 779
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 780 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 834
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 835 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 893
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 894 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMA 953
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 954 EPAQRKIIMHKIRPHISTLRKYTYGKHILAK 984
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + L+ YGCR +QR + E+ I E+ +L+
Sbjct: 808 QFIIDAF--------KGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ 859
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L L+ F +V C+ TH RA
Sbjct: 860 DQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALL 918
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +++ +RP TL K T G
Sbjct: 919 IDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHISTLRKYTYG 978
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 979 KHILAKLEKYY 989
>gi|403288169|ref|XP_003935285.1| PREDICTED: pumilio homolog 2 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 1010
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 653 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 712
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 713 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 769
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 770 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 828
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 829 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 888
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 889 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 948
Query: 426 IQSAL 430
+Q +
Sbjct: 949 VQKMI 953
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ + E+
Sbjct: 723 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELD 782
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 783 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 837
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 838 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 896
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 897 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMA 956
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 957 EPAQRKIIMHKIRPHITTLRKYTYGKHILAK 987
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + L+ YGCR +QR + E+ I E+ +L+
Sbjct: 811 QFIIDAF--------KGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ 862
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L L+ F +V C+ TH RA
Sbjct: 863 DQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALL 921
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +++ +RP TL K T G
Sbjct: 922 IDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYG 981
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 982 KHILAKLEKYY 992
>gi|194385402|dbj|BAG65078.1| unnamed protein product [Homo sapiens]
Length = 1008
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 651 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 710
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 711 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 767
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 768 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 826
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 827 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 886
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 887 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 946
Query: 426 IQSAL 430
+Q +
Sbjct: 947 VQKMI 951
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ + E+
Sbjct: 721 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELD 780
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 781 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 835
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 836 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 894
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 895 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMA 954
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 955 EPAQRKIIMHKIRPHITTLRKYTYGKHILAK 985
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + L+ YGCR +QR + E+ I E+ +L+
Sbjct: 809 QFIIDAF--------KGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ 860
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L L+ F +V C+ TH RA
Sbjct: 861 DQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALL 919
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +++ +RP TL K T G
Sbjct: 920 IDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYG 979
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 980 KHILAKLEKYY 990
>gi|332812701|ref|XP_003308953.1| PREDICTED: pumilio homolog 2 [Pan troglodytes]
gi|397513517|ref|XP_003827059.1| PREDICTED: pumilio homolog 2 isoform 2 [Pan paniscus]
gi|426334845|ref|XP_004028947.1| PREDICTED: pumilio homolog 2 isoform 3 [Gorilla gorilla gorilla]
Length = 1009
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 652 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 711
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 712 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 768
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 769 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 827
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 828 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 887
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 888 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 947
Query: 426 IQSAL 430
+Q +
Sbjct: 948 VQKMI 952
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ + E+
Sbjct: 722 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELD 781
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 782 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 836
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 837 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 895
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 896 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMA 955
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 956 EPAQRKIIMHKIRPHITTLRKYTYGKHILAK 986
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + L+ YGCR +QR + E+ I E+ +L+
Sbjct: 810 QFIIDAF--------KGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ 861
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L L+ F +V C+ TH RA
Sbjct: 862 DQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALL 920
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +++ +RP TL K T G
Sbjct: 921 IDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYG 980
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 981 KHILAKLEKYY 991
>gi|452821137|gb|EME28171.1| RNA-binding protein [Galdieria sulphuraria]
Length = 996
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 152/292 (52%), Gaps = 10/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+RG+I A DQ+G R +Q+ + EEI + E+ + L+ID FGNYVVQKL
Sbjct: 672 LLDIRGHIAEFASDQHGSRFIQQKLEGANLEEIRSLVAELGPDIDRLVIDVFGNYVVQKL 731
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E E R L+ + ++ + L+ +G R V K LE L ++ LV L
Sbjct: 732 LEHGDENIRQ---LLTKKLEGHMLSLSLHMYGCRVVQKALEVLKGNERTQLV-QELDGHV 787
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ C++ E+ ++++ V +A GC V+Q +E+
Sbjct: 788 LQCIRDQNGNHVIQKCIELVEPENIVFIVDSVKGQAVALAEHAYGCRVVQRVLEHCPKEH 847
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ ++AEI+ A L D YGNYV+QH++ A +++ + V+F+ +K+ SNV
Sbjct: 848 KAEILAEIMGCARDLIRDQYGNYVIQHIVEKGDADNKAVIMKVVLNEVVAFAQHKFASNV 907
Query: 388 VERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSALLVS 433
VERCL Q I L+R + +S L+ FGNYV+Q L V+
Sbjct: 908 VERCLQYGSPVQRMDFIEVLVRGKDSAEDCPLSNLVKDQFGNYVVQRILDVA 959
>gi|402890199|ref|XP_003908378.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 2 [Papio anubis]
Length = 984
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 627 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 686
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 687 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 743
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 744 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 802
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 803 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 862
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 863 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 922
Query: 426 IQSAL 430
+Q +
Sbjct: 923 VQKMI 927
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ + E+
Sbjct: 697 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELD 756
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 757 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 811
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 812 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 870
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 871 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMA 930
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 931 EPAQRKIIMHKIRPHITTLRKYTYGKHILAK 961
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 791 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 850
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 851 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 909
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 910 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 966
>gi|62718869|emb|CAG25892.1| Pumilio homolog [Dugesia japonica]
Length = 925
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 146/263 (55%), Gaps = 4/263 (1%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
+L+D+ G++V A+DQ+G R +Q+ + E M+F E++ + LM D FGNYV+Q+
Sbjct: 546 TLQDISGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPQCYSLMTDVFGNYVIQR 605
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
+L + EQ I ++ Q++++ L +G R + K LE ++ QI++V L
Sbjct: 606 FFDLGTPEQ---IQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIV-RELEGS 661
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q CV+ E ++++ DN Y ++T GC V+Q +E+
Sbjct: 662 VIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPE 721
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++AE+ L +D YGNYV+QH+L + + ++ L G V S +K+ SN
Sbjct: 722 QTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVNLLRGRIVELSIHKFASN 781
Query: 387 VVERCLLESGEEQSTRIIIELLR 409
VVE+ + + ++ +I E+L+
Sbjct: 782 VVEKAVAHATRQERQALINEVLQ 804
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+R ++ L+ YGCR +Q+ + ++ K I E+ V + + D GN+VVQK VE
Sbjct: 622 IRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVEC 681
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
E I+ D F+ L+TH G R + ++LE+ T P+Q + +LA L
Sbjct: 682 VPPEHLDFII-----DAFKDNVYSLSTHSYGCRVIQRILEHCT-PEQTAPILAELHHFTE 735
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L KD G+YVIQ+ ++H ED ++N + ++ K V++ V ++ +R
Sbjct: 736 ELVKDQYGNYVIQHVLEHGKTEDKSKIVNLLRGRIVELSIHKFASNVVEKAVAHATRQER 795
Query: 329 ERLVAEII--------ANALLLAEDCYG 348
+ L+ E++ +NA++ D G
Sbjct: 796 QALINEVLQDSIPVSASNAIMRTADVSG 823
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 6/188 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ + +L L + V +D +G IQ ++ SH + + E+ CY
Sbjct: 532 RLLEDFRANRLTTLTLQDISGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPQCY 591
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLAL--RVPQ 362
+ TD G V+Q + Q + L I L L+ YG V+Q L +V Q
Sbjct: 592 SLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQ 651
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFG 422
I +++R+LEG + ++ G++VV++C +E + II+ + NV L H +G
Sbjct: 652 I--NIVRELEGSVIKCVKDQNGNHVVQKC-VECVPPEHLDFIIDAFKD-NVYSLSTHSYG 707
Query: 423 NYVIQSAL 430
VIQ L
Sbjct: 708 CRVIQRIL 715
>gi|358414517|ref|XP_003582857.1| PREDICTED: pumilio homolog 2 [Bos taurus]
gi|359070234|ref|XP_003586698.1| PREDICTED: pumilio homolog 2 isoform 2 [Bos taurus]
Length = 1063
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 706 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 765
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 766 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 822
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 823 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 881
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 882 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 941
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 942 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 1001
Query: 426 IQSAL 430
+Q +
Sbjct: 1002 VQKMI 1006
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 798 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 856
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 857 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 911
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 912 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 971
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 972 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHISTLRKY 1031
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1032 TYGKHILAK 1040
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 870 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 929
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 930 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 988
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 989 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHISTLRKYTYGKHILAKLEKYY 1045
>gi|426223186|ref|XP_004005758.1| PREDICTED: pumilio homolog 2 isoform 1 [Ovis aries]
Length = 1063
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 706 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 765
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 766 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 822
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 823 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 881
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 882 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 941
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 942 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 1001
Query: 426 IQSAL 430
+Q +
Sbjct: 1002 VQKMI 1006
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 798 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 856
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 857 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 911
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 912 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 971
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 972 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 1031
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1032 TYGKHILAK 1040
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 870 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 929
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 930 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 988
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 989 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1045
>gi|45551850|ref|NP_731316.2| pumilio, isoform B [Drosophila melanogaster]
gi|45446432|gb|AAF54338.2| pumilio, isoform B [Drosophila melanogaster]
Length = 1185
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 153/289 (52%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK
Sbjct: 761 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 820
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+ + + + QL L +G R + K LE+++ P+Q ++ L
Sbjct: 821 FEFGTPEQKNTLGMQVKGHVLQL---ALQMYGCRVIQKALESIS-PEQQQEIVHELDGHV 876
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++N Y ++T GC V+Q +E+ Q
Sbjct: 877 LKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQ 936
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L + + L+ + G + S +K+ SNV
Sbjct: 937 TTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNV 996
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + T +I E+ + +++ + NYV+Q + VS+
Sbjct: 997 VEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSE 1045
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 125/243 (51%), Gaps = 12/243 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +E
Sbjct: 836 VKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIE- 894
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + + L + F+ L+TH G R + ++LE+ T +Q + +L L
Sbjct: 895 CVDP----VALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTA-EQTTPILDELHEHTE 949
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED L+N V ++ K V++ CV ++ +R
Sbjct: 950 QLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGER 1009
Query: 329 ERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H + YG
Sbjct: 1010 TGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYG 1069
Query: 385 SNV 387
++
Sbjct: 1070 KHI 1072
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + + + +E+ Y
Sbjct: 746 RLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAY 805
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q+ L ++ + L LA YG V+Q L P+
Sbjct: 806 SLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQ 865
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++ +L+GH + ++ G++VV++C +E + + + II + V L HP+G
Sbjct: 866 QEIVHELDGHVLKCVKDQNGNHVVQKC-IECVDPVALQFIINAFKG-QVYSLSTHPYGCR 923
Query: 425 VIQSAL 430
VIQ L
Sbjct: 924 VIQRIL 929
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 64/140 (45%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +L + L +DQYG +Q + +E+ ++ V +V L F + VV+K
Sbjct: 941 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 1000
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + +RT ++ + + + + + V++ + +++ P Q+ ++ +RP
Sbjct: 1001 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHM 1060
Query: 268 VTLTKDTNGHYVIQYCVKHF 287
L K T G ++ K++
Sbjct: 1061 AALRKYTYGKHINAKLEKYY 1080
>gi|350582684|ref|XP_003481332.1| PREDICTED: pumilio homolog 2 [Sus scrofa]
Length = 1004
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 647 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 706
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 707 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 763
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 764 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 822
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 823 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 882
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 883 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 942
Query: 426 IQSAL 430
+Q +
Sbjct: 943 VQKMI 947
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ + E+
Sbjct: 717 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELD 776
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 777 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 831
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 832 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 890
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 891 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMA 950
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 951 EPAQRKIIMHKIRPHITTLRKYTYGKHILAK 981
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + L+ YGCR +QR + E+ I E+ +L+
Sbjct: 805 QFIIDAF--------KGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ 856
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L L+ F +V C+ TH RA
Sbjct: 857 DQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALL 915
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +++ +RP TL K T G
Sbjct: 916 IDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYG 975
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 976 KHILAKLEKYY 986
>gi|237649070|ref|NP_109648.2| pumilio homolog 2 isoform 1 [Mus musculus]
gi|237649081|ref|NP_001153691.1| pumilio homolog 2 isoform 1 [Mus musculus]
gi|41688655|sp|Q80U58.2|PUM2_MOUSE RecName: Full=Pumilio homolog 2
gi|13919630|gb|AAK21966.1| PUM1 [Mus musculus]
gi|148665992|gb|EDK98408.1| pumilio 2 (Drosophila) [Mus musculus]
Length = 1066
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 166/306 (54%), Gaps = 13/306 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +++F E++
Sbjct: 707 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQA 766
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 767 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 823
Query: 251 TNPQQ-ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATD 309
++ QQ IS ++ L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 824 SSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTH 883
Query: 310 KSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLR 369
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++
Sbjct: 884 PYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVS 943
Query: 370 QLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNY 424
++ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NY
Sbjct: 944 EIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANY 1003
Query: 425 VIQSAL 430
V+Q +
Sbjct: 1004 VVQKMI 1009
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 127/251 (50%), Gaps = 17/251 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+RG+++ LA YGCR +Q+ + S+ ++ I + E+ V + + D GN+VVQK +
Sbjct: 799 IRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCI 858
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 859 E-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQH 912
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A
Sbjct: 913 TEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRA 972
Query: 327 QRERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFS 379
+R L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 973 ERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLR 1032
Query: 380 CNKYGSNVVER 390
YG +++ +
Sbjct: 1033 KYTYGKHILAK 1043
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 873 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 932
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 933 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 991
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 992 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1048
>gi|297668111|ref|XP_002812298.1| PREDICTED: pumilio homolog 2 isoform 3 [Pongo abelii]
Length = 1009
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 652 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 711
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 712 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 768
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 769 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 827
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 828 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 887
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 888 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 947
Query: 426 IQSAL 430
+Q +
Sbjct: 948 VQKMI 952
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ + E+
Sbjct: 722 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELD 781
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 782 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 836
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 837 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 895
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 896 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMA 955
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 956 EPAQRKIIMHKIRPHITTLRKYTYGKHILAK 986
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + L+ YGCR +QR + E+ I E+ +L+
Sbjct: 810 QFIIDAF--------KGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ 861
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L L+ F +V C+ TH RA
Sbjct: 862 DQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALL 920
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +++ +RP TL K T G
Sbjct: 921 IDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYG 980
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 981 KHILAKLEKYY 991
>gi|427782705|gb|JAA56804.1| Putative pumilio log 1 [Rhipicephalus pulchellus]
Length = 1138
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 155/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +++F E++ LM D FGNYV+QK
Sbjct: 794 LRDLANHIVEFSQDQHGSRFIQQKLERATLAEKQLVFSEILGAAYNLMTDVFGNYVIQKF 853
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ + L + ++ + L +G R + K LE+++ P Q V+ L
Sbjct: 854 FEFGSAEQKQALALKVKG---HVLPLALQMYGCRVIQKALESIS-PDQQKEVVKELDGHV 909
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++N + ++T GC V+Q +E+ G Q
Sbjct: 910 LKCVKDQNGNHVVQKCIECVDPSALQFIINAFQGQVFCLSTHPYGCRVIQRILEHCTGEQ 969
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYVVQH+L P+ ++ + G + S +K+ SNV
Sbjct: 970 TGPVLEELHQHTEQLVQDQYGNYVVQHVLEHGRPEDKGRIVAAVRGRVLPLSQHKFASNV 1029
Query: 388 VERCLLESGEEQSTRIIIEL---LRSPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ + P+ ++ M + NYV+Q + V++
Sbjct: 1030 VEKCVTHASRSERALLIEEVCAYVDGPHSALYTMMKDQYANYVVQKMIEVAE 1081
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 136/260 (52%), Gaps = 18/260 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+++ LA YGCR +Q+ + S+ ++ + + E+ V + + D GN+VVQK +E
Sbjct: 869 VKGHVLPLALQMYGCRVIQKALESISPDQQKEVVKELDGHVLKCVKDQNGNHVVQKCIE- 927
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + + ++ + FQ CL+TH G R + ++LE+ T +Q VL L
Sbjct: 928 CVDPSALQFII----NAFQGQVFCLSTHPYGCRVIQRILEHCTG-EQTGPVLEELHQHTE 982
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YV+Q+ ++H ED ++ V ++ K V++ CV ++ ++R
Sbjct: 983 QLVQDQYGNYVVQHVLEHGRPEDKGRIVAAVRGRVLPLSQHKFASNVVEKCVTHASRSER 1042
Query: 329 ERLVAEIIA------NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ A +AL + +D Y NYVVQ ++ + P LL ++ H S
Sbjct: 1043 ALLIEEVCAYVDGPHSALYTMMKDQYANYVVQKMIEVAEPPQRKLLLHKIRPHVPSLRKY 1102
Query: 382 KYGSNV---VERCLLESGEE 398
YG ++ +E+ LL+SG++
Sbjct: 1103 TYGKHILAKLEKHLLKSGDQ 1122
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 92/186 (49%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + + + +E+ Y
Sbjct: 779 RLLEDFRNNRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATLAEKQLVFSEILGAAY 838
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q++ L ++ + L LA YG V+Q L P
Sbjct: 839 NLMTDVFGNYVIQKFFEFGSAEQKQALALKVKGHVLPLALQMYGCRVIQKALESISPDQQ 898
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++++L+GH + ++ G++VV++C +E + + + II + V L HP+G
Sbjct: 899 KEVVKELDGHVLKCVKDQNGNHVVQKC-IECVDPSALQFIINAFQG-QVFCLSTHPYGCR 956
Query: 425 VIQSAL 430
VIQ L
Sbjct: 957 VIQRIL 962
>gi|403288167|ref|XP_003935284.1| PREDICTED: pumilio homolog 2 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 987
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 630 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 689
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 690 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 746
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 747 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 805
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 806 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 865
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 866 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 925
Query: 426 IQSAL 430
+Q +
Sbjct: 926 VQKMI 930
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ + E+
Sbjct: 700 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELD 759
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 760 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 814
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 815 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 873
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 874 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMA 933
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 934 EPAQRKIIMHKIRPHITTLRKYTYGKHILAK 964
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 794 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 853
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 854 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 912
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 913 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 969
>gi|426223188|ref|XP_004005759.1| PREDICTED: pumilio homolog 2 isoform 2 [Ovis aries]
Length = 1007
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 650 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 709
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 710 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 766
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 767 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 825
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 826 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 885
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 886 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 945
Query: 426 IQSAL 430
+Q +
Sbjct: 946 VQKMI 950
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ + E+
Sbjct: 720 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELD 779
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 780 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 834
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 835 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 893
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 894 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMA 953
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 954 EPAQRKIIMHKIRPHITTLRKYTYGKHILAK 984
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + L+ YGCR +QR + E+ I E+ +L+
Sbjct: 808 QFIIDAF--------KGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ 859
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L L+ F +V C+ TH RA
Sbjct: 860 DQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALL 918
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +++ +RP TL K T G
Sbjct: 919 IDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYG 978
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 979 KHILAKLEKYY 989
>gi|291387140|ref|XP_002710094.1| PREDICTED: pumilio homolog 2-like isoform 1 [Oryctolagus cuniculus]
Length = 986
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 629 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 688
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 689 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 745
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 746 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 804
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 805 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 864
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 865 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQSDGPHSALYTMMKDQYANYV 924
Query: 426 IQSAL 430
+Q +
Sbjct: 925 VQKMI 929
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 721 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 779
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 780 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 834
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 835 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 894
Query: 329 ERLVAEIIANA-------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 895 ALLIDEVCCQSDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 954
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 955 TYGKHILAK 963
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 793 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 852
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 853 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQSDGPHSA 911
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 912 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 968
>gi|358414519|ref|XP_869549.5| PREDICTED: pumilio homolog 2 isoform 7 [Bos taurus]
gi|359070241|ref|XP_003586699.1| PREDICTED: pumilio homolog 2 isoform 3 [Bos taurus]
Length = 984
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 627 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 686
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 687 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 743
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 744 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 802
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 803 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 862
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 863 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 922
Query: 426 IQSAL 430
+Q +
Sbjct: 923 VQKMI 927
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 719 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 777
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 778 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 832
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 833 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 892
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 893 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHISTLRKY 952
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 953 TYGKHILAK 961
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 791 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 850
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 851 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 909
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 910 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHISTLRKYTYGKHILAKLEKYY 966
>gi|9293981|dbj|BAB01884.1| RNA binding protein-like [Arabidopsis thaliana]
Length = 962
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 150/293 (51%), Gaps = 10/293 (3%)
Query: 148 LRDLRGNIVALAK-DQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
L D+ G +V DQ+G R +Q+ + EE +F EV+ + +LM D FGNYV+QK
Sbjct: 626 LSDIAGRVVEFRHVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQK 685
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
+E + QR ++ L Q+V + L +G R + K LE + Q+ L+ L
Sbjct: 686 FIEHGTPAQREELVKQLAG---QMVSLSLQMYGCRVIQKALEVIDVDQKTELI-RELDGN 741
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKG 325
+ +D NG++VIQ C++ +++ ++T GC V+Q +E+ S
Sbjct: 742 VLKCVRDQNGNHVIQKCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDD 801
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
+ ++ EI+ +A LA D YGNYV QH+L P ++ +L G+ V S +KY S
Sbjct: 802 EETHCIIDEILESAFALAHDQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMSQHKYAS 861
Query: 386 NVVERCLLESGEEQSTRIIIELL----RSPNVSMLLMHPFGNYVIQSALLVSK 434
NVVE+CL + + +I E++ ++ ++ F NYV+Q L +SK
Sbjct: 862 NVVEKCLEHADSTEREFLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVLEISK 914
>gi|426334843|ref|XP_004028946.1| PREDICTED: pumilio homolog 2 isoform 2 [Gorilla gorilla gorilla]
Length = 986
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 629 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 688
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 689 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 745
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 746 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 804
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 805 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 864
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 865 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 924
Query: 426 IQSAL 430
+Q +
Sbjct: 925 VQKMI 929
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ + E+
Sbjct: 699 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELD 758
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 759 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 813
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 814 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 872
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 873 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMA 932
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 933 EPAQRKIIMHKIRPHITTLRKYTYGKHILAK 963
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 793 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 852
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 853 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 911
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 912 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 968
>gi|119621227|gb|EAX00822.1| pumilio homolog 2 (Drosophila), isoform CRA_b [Homo sapiens]
gi|219517887|gb|AAI43551.1| PUM2 protein [Homo sapiens]
Length = 985
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 628 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 687
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 688 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 744
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 745 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 803
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 804 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 863
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 864 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 923
Query: 426 IQSAL 430
+Q +
Sbjct: 924 VQKMI 928
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ + E+
Sbjct: 698 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELD 757
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 758 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 812
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 813 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 871
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 872 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMA 931
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 932 EPAQRKIIMHKIRPHITTLRKYTYGKHILAK 962
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 792 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 851
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 852 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 910
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 911 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 967
>gi|73979803|ref|XP_858023.1| PREDICTED: pumilio homolog 2 isoform 5 [Canis lupus familiaris]
Length = 984
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 627 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 686
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 687 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 743
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 744 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 802
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 803 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 862
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 863 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 922
Query: 426 IQSAL 430
+Q +
Sbjct: 923 VQKMI 927
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 719 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 777
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 778 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 832
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 833 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 892
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 893 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 952
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 953 TYGKHILAK 961
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 791 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 850
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 851 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 909
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 910 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 966
>gi|350582682|ref|XP_003481331.1| PREDICTED: pumilio homolog 2 [Sus scrofa]
Length = 981
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 624 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 683
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 684 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 740
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 741 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 799
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 800 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 859
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 860 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 919
Query: 426 IQSAL 430
+Q +
Sbjct: 920 VQKMI 924
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 716 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 774
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 775 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 829
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 830 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 889
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 890 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 949
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 950 TYGKHILAK 958
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 788 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 847
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 848 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 906
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 907 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 963
>gi|330797119|ref|XP_003286610.1| hypothetical protein DICPUDRAFT_31148 [Dictyostelium purpureum]
gi|325083435|gb|EGC36888.1| hypothetical protein DICPUDRAFT_31148 [Dictyostelium purpureum]
Length = 332
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 161/290 (55%), Gaps = 11/290 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D++G+I +KDQ G R +Q+ + + EE +++F EV+ V LM D FGNYV+QK
Sbjct: 5 LSDIKGHIAEFSKDQVGSRIIQQKIENASLEEKQLVFDEVVVAVHSLMTDVFGNYVLQKF 64
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+ + L+ ++ + L +G R + K +E++ +QI L++ L
Sbjct: 65 FEHGTTEQKRILADKLSG---HILSLTLQMYGCRVIQKAIESIELDKQI-LLIGELNGHI 120
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V D NG++VIQ C++ +++++ + Y +AT GC V+Q +E+ +Q
Sbjct: 121 VQCVTDQNGNHVIQKCIEKIPTNLIQFIIDSFHGHIYQLATHPYGCRVIQRILEHCAESQ 180
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E++ A+ L +D YGNYV+QH+L + +++ +L+G + S +K+ SNV
Sbjct: 181 VAPILDELMRCAVSLVQDQYGNYVIQHVLENGSQRDKTAIVYKLQGQIYNLSQHKFASNV 240
Query: 388 VERCLLESGEEQSTRIIIELL---RSPNVSMLLMH----PFGNYVIQSAL 430
+E+C+ + II E+L +PN S +L+ P+ NYVIQ L
Sbjct: 241 IEKCVQHGVSSERILIINEILGDINAPNSSNVLLKILKDPYANYVIQKIL 290
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 133/258 (51%), Gaps = 17/258 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G+I++L YGCR +Q+ + S+ ++ ++ E+ + + + D GN+V+QK
Sbjct: 80 LSGHILSLTLQMYGCRVIQKAIESIELDKQILLIGELNGHIVQCVTDQNGNHVIQK---- 135
Query: 211 CSEEQRTRILLMLTNDDFQ--LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C E+ T L+ D F + ++ + +G R + ++LE+ Q ++ +L L AV
Sbjct: 136 CIEKIPTN-LIQFIIDSFHGHIYQLATHPYGCRVIQRILEHCAESQ-VAPILDELMRCAV 193
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
+L +D G+YVIQ+ +++ S D ++ ++ Y ++ K V++ CV++ ++R
Sbjct: 194 SLVQDQYGNYVIQHVLENGSQRDKTAIVYKLQGQIYNLSQHKFASNVIEKCVQHGVSSER 253
Query: 329 ERLVAEII--------ANALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFS 379
++ EI+ +N LL + +D Y NYV+Q +L + P ++ +++ +
Sbjct: 254 ILIINEILGDINAPNSSNVLLKILKDPYANYVIQKILDIVEPSQRDVIINRIQPFIPTLK 313
Query: 380 CNKYGSNVVERCLLESGE 397
G +++ R SG+
Sbjct: 314 KVTPGKHIISRIDKYSGQ 331
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 6/177 (3%)
Query: 256 ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCV 315
+ L L+ ++ +KD G +IQ +++ S E+ + + +EV + + TD G V
Sbjct: 1 MKLELSDIKGHIAEFSKDQVGSRIIQQKIENASLEEKQLVFDEVVVAVHSLMTDVFGNYV 60
Query: 316 LQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHY 375
LQ E+ Q+ L ++ + L L YG V+Q + L+ +L GH
Sbjct: 61 LQKFFEHGTTEQKRILADKLSGHILSLTLQMYGCRVIQKAIESIELDKQILLIGELNGHI 120
Query: 376 VSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS--PNVSMLLMHPFGNYVIQSAL 430
V ++ G++V+++C+ E+ T +I ++ S ++ L HP+G VIQ L
Sbjct: 121 VQCVTDQNGNHVIQKCI----EKIPTNLIQFIIDSFHGHIYQLATHPYGCRVIQRIL 173
>gi|158191|gb|AAB59189.1| pumilio protein [Drosophila melanogaster]
gi|384208|prf||1905306A pumilio gene
Length = 1533
Score = 148 bits (374), Expect = 5e-33, Method: Composition-based stats.
Identities = 85/289 (29%), Positives = 153/289 (52%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK
Sbjct: 1109 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 1168
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+ + + + QL L +G R + K LE+++ P+Q ++ L
Sbjct: 1169 FEFGTPEQKNTLGMQVKGHVLQLA---LQMYGCRVIQKALESIS-PEQQQEIVHELDGHV 1224
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++N Y ++T GC V+Q +E+ Q
Sbjct: 1225 LKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQ 1284
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L + + L+ + G + S +K+ SNV
Sbjct: 1285 TTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNV 1344
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + T +I E+ + +++ + NYV+Q + VS+
Sbjct: 1345 VEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSE 1393
Score = 102 bits (253), Expect = 5e-19, Method: Composition-based stats.
Identities = 70/243 (28%), Positives = 125/243 (51%), Gaps = 12/243 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +E
Sbjct: 1184 VKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIE- 1242
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + + L + F+ L+TH G R + ++LE+ T +Q + +L L
Sbjct: 1243 CVDP----VALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCT-AEQTTPILDELHEHTE 1297
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED L+N V ++ K V++ CV ++ +R
Sbjct: 1298 QLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGER 1357
Query: 329 ERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H + YG
Sbjct: 1358 TGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYG 1417
Query: 385 SNV 387
++
Sbjct: 1418 KHI 1420
Score = 68.6 bits (166), Expect = 6e-09, Method: Composition-based stats.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N +L L L V ++D +G IQ ++ + + + + +E+ Y
Sbjct: 1094 RLLEDFRNQPYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAY 1153
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q+ L ++ + L LA YG V+Q L P+
Sbjct: 1154 SLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQ 1213
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++ +L+GH + ++ G++VV++C +E + + + II + V L HP+G
Sbjct: 1214 QEIVHELDGHVLKCVKDQNGNHVVQKC-IECVDPVALQFIINAFKG-QVYSLSTHPYGCR 1271
Query: 425 VIQSAL 430
VIQ L
Sbjct: 1272 VIQRIL 1277
Score = 39.7 bits (91), Expect = 3.2, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 61/132 (46%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +L + L +DQYG +Q + +E+ ++ V +V L F + VV+K
Sbjct: 1289 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 1348
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + +RT ++ + + + + + V++ + +++ P Q+ ++ +RP
Sbjct: 1349 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHM 1408
Query: 268 VTLTKDTNGHYV 279
L K T G ++
Sbjct: 1409 AALRKYTYGKHI 1420
>gi|357445493|ref|XP_003593024.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355482072|gb|AES63275.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 396
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 151/277 (54%), Gaps = 14/277 (5%)
Query: 152 RGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL- 210
RG++V++A + C++L + MI +V D + +LM+ FG+ +++K+ E
Sbjct: 113 RGSVVSMAITERDCQYLHAIIDEGNPTNAAMILSKVKDYLHDLMMHRFGSTLIKKIFEAK 172
Query: 211 --CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
+ EQ I+ ++ +D ++ +C+N +G R + +L N +P +V A++
Sbjct: 173 KGMAMEQMDSIVYLILANDRKMWDVCINYYGTRVMQTILHNTRHPFMKFVVAYAVKRNTT 232
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L K+TNG +VI CVK F K +L+EVA NC IATDK GC ++ C+++ +G
Sbjct: 233 ALMKNTNGSHVIVQCVKLFPSILKKMILDEVARNCCNIATDKIGCLAVKRCLKHGEGTAI 292
Query: 329 ERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
+ LV +II+NA++L YV++ ++ P ++ + + + S NKY SNV+
Sbjct: 293 DLLVTQIISNAMVL-------YVIK----MKFPLAKEWMIEEFQNKFDRLSMNKYASNVM 341
Query: 389 ERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
E L S + I+ E++RS N +L PFGNYV
Sbjct: 342 EYLLRFSNKSAVKVIVEEIMRSRNFLKVLQDPFGNYV 378
>gi|8394|emb|CAA44474.1| pumilio [Drosophila melanogaster]
Length = 1533
Score = 148 bits (374), Expect = 5e-33, Method: Composition-based stats.
Identities = 85/289 (29%), Positives = 153/289 (52%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK
Sbjct: 1109 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 1168
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+ + + + QL L +G R + K LE+++ P+Q ++ L
Sbjct: 1169 FEFGTPEQKNTLGMQVKGHVLQLA---LQMYGCRVIQKALESIS-PEQQQEIVHELDGHV 1224
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++N Y ++T GC V+Q +E+ Q
Sbjct: 1225 LKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQ 1284
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L + + L+ + G + S +K+ SNV
Sbjct: 1285 TTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNV 1344
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + T +I E+ + +++ + NYV+Q + VS+
Sbjct: 1345 VEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSE 1393
Score = 99.4 bits (246), Expect = 3e-18, Method: Composition-based stats.
Identities = 69/243 (28%), Positives = 125/243 (51%), Gaps = 12/243 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +E
Sbjct: 1184 VKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIE- 1242
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + + L + F+ L+TH G R + ++LE+ T +Q + +L L
Sbjct: 1243 CVDP----VALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCT-AEQTTPILDELHEHTE 1297
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED L+N V ++ K V++ CV ++ +R
Sbjct: 1298 QLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGER 1357
Query: 329 ERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ + + YG
Sbjct: 1358 TGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRKNMAALRKYTYG 1417
Query: 385 SNV 387
++
Sbjct: 1418 KHI 1420
Score = 69.7 bits (169), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + + + +E+ Y
Sbjct: 1094 RLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAY 1153
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q+ L ++ + L LA YG V+Q L P+
Sbjct: 1154 SLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQ 1213
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++ +L+GH + ++ G++VV++C +E + + + II + V L HP+G
Sbjct: 1214 QEIVHELDGHVLKCVKDQNGNHVVQKC-IECVDPVALQFIINAFKG-QVYSLSTHPYGCR 1271
Query: 425 VIQSAL 430
VIQ L
Sbjct: 1272 VIQRIL 1277
>gi|449496651|ref|XP_004160189.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1-like [Cucumis
sativus]
Length = 1043
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 153/292 (52%), Gaps = 11/292 (3%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
C L ++ G++ + DQYG R +Q+ + + + MI+ E++ + LM D FGNYV+
Sbjct: 699 CFELSEIAGHVFEFSGDQYGSRFIQQKLETATADXKNMIYQEIMPQALALMTDVFGNYVI 758
Query: 205 QKLVELCSEEQRTRILLMLTNDDF-QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL 263
QK E QR L N F ++ + L +G R + K +E + Q+I +V L
Sbjct: 759 QKFFEHGLAAQRRE----LANKLFGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMV-GEL 813
Query: 264 RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
+ +D NG++VIQ C++ ++++ D ++T GC V+Q +E+
Sbjct: 814 DGHVMRCVRDQNGNHVIQKCIECVPESAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHC 873
Query: 324 KG-AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
K + R++ EI+ + +LA+D YGNYVVQH+L ++++++L G V S K
Sbjct: 874 KDETTQSRVMEEILGSVSMLAQDQYGNYVVQHVLEHGKSHERSAIIKELAGRIVQMSQQK 933
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
+ SNVVE+CL G + ++ E+L + + + ++ F NYV+Q L
Sbjct: 934 FASNVVEKCLTFGGPTERQLLVSEMLGTTDENEPLQAMMKDQFANYVVQKVL 985
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 284 VKHFSHEDTK-YLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLL 342
++ F TK + L+E+A + + + D+ G +Q +E + + + EI+ AL L
Sbjct: 689 LEEFKSNKTKCFELSEIAGHVFEFSGDQYGSRFIQQKLETATADXKNMIYQEIMPQALAL 748
Query: 343 AEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTR 402
D +GNYV+Q + L +L GH ++ S YG V+++ + +Q +
Sbjct: 749 MTDVFGNYVIQKFFEHGLAAQRRELANKLFGHVLTLSLQMYGCRVIQKAIEVVDLDQKIK 808
Query: 403 IIIELLRSPNVSMLLMHPFGNYVIQ 427
++ EL +V + GN+VIQ
Sbjct: 809 MVGEL--DGHVMRCVRDQNGNHVIQ 831
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE + + L+ + + D G IQ ++ + + + E+
Sbjct: 688 LLEEFKSNKTKCFELSEIAGHVFEFSGDQYGSRFIQQKLETATADXKNMIYQEIMPQALA 747
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ AQR L ++ + L L+ YG V+Q + +
Sbjct: 748 LMTDVFGNYVIQKFFEHGLAAQRRELANKLFGHVLTLSLQMYGCRVIQKAIEVVDLDQKI 807
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++ +L+GH + ++ G++V+++C +E E + I+ V L HP+G V
Sbjct: 808 KMVGELDGHVMRCVRDQNGNHVIQKC-IECVPESAIHFIVSTFFD-QVVTLSTHPYGCRV 865
Query: 426 IQSAL 430
IQ L
Sbjct: 866 IQRVL 870
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L G IV +++ ++ +++ ++ E +++ E++ E +M D F N
Sbjct: 919 IKELAGRIVQMSQQKFASNVVEKCLTFGGPTERQLLVSEMLGTTDENEPLQAMMKDQFAN 978
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 979 YVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIVARVEKLV 1024
>gi|11139702|gb|AAG31805.1|AF315590_1 Pumilio 2 [Mus musculus]
Length = 1066
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 166/306 (54%), Gaps = 13/306 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +++F E++
Sbjct: 707 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQA 766
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 767 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 823
Query: 251 TNPQQ-ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATD 309
++ QQ IS ++ L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 824 SSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTH 883
Query: 310 KSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLR 369
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++
Sbjct: 884 PYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVS 943
Query: 370 QLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNY 424
++ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NY
Sbjct: 944 EIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANY 1003
Query: 425 VIQSAL 430
V+Q +
Sbjct: 1004 VVQKMI 1009
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 127/251 (50%), Gaps = 17/251 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+RG+++ LA YGCR +Q+ + S+ ++ I + E+ V + + D GN+VVQK +
Sbjct: 799 IRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCI 858
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 859 E-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQH 912
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A
Sbjct: 913 TEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRA 972
Query: 327 QRERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFS 379
+R L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 973 ERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLR 1032
Query: 380 CNKYGSNVVER 390
YG +++ +
Sbjct: 1033 KYTYGKHILAK 1043
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 873 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 932
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 933 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 991
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 992 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1048
>gi|431911864|gb|ELK14008.1| Pumilio like protein 2 [Pteropus alecto]
Length = 1056
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 699 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 758
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 759 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 815
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 816 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKAQVFVLSTHP 874
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 875 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 934
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 935 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 994
Query: 426 IQSAL 430
+Q +
Sbjct: 995 VQKMI 999
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 791 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 849
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 850 CVQPQSLQFII----DAFKAQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 904
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 905 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 964
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 965 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 1024
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1025 TYGKHILAK 1033
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 74/177 (41%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+ + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 863 FKAQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 922
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 923 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 981
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 982 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1038
>gi|347970899|ref|XP_318367.5| AGAP003914-PA [Anopheles gambiae str. PEST]
gi|347970901|ref|XP_003436659.1| AGAP003914-PC [Anopheles gambiae str. PEST]
gi|333469538|gb|EAA13588.5| AGAP003914-PA [Anopheles gambiae str. PEST]
gi|333469540|gb|EGK97333.1| AGAP003914-PC [Anopheles gambiae str. PEST]
Length = 869
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 155/289 (53%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +++F E++ LM D FGNYV+QK
Sbjct: 422 LRDLTNHIVEFSQDQHGSRFIQQKLERAISVEKQLVFNEILGAAYSLMTDVFGNYVIQKF 481
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ + + ++ + L +G R + K LE++ QQ +V L
Sbjct: 482 FEFGSPEQKQALAQQVKG---HVLPLALQMYGCRVIQKALESIPAEQQQEIVRE-LDGHV 537
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ +++++ + Y ++T GC V+Q +E+ Q
Sbjct: 538 LKCVKDQNGNHVVQKCIECVDPVALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHCTPEQ 597
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++AE+ AN L +D YGNYV+QH+L P+ ++L+ + G + S +K+ SNV
Sbjct: 598 TAPILAELHANTEHLIQDQYGNYVIQHVLEHGKPEDKSALIASVRGKVLILSQHKFASNV 657
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ + +++ + NYV+Q + VS+
Sbjct: 658 VEKCVTHATRAERALLIEEVCSFNDSGLHVMMKDQYANYVVQKMIDVSE 706
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 129/248 (52%), Gaps = 12/248 (4%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ ++G+++ LA YGCR +Q+ + S+P E+ + I E+ V + + D GN+VVQK +
Sbjct: 495 QQVKGHVLPLALQMYGCRVIQKALESIPAEQQQEIVRELDGHVLKCVKDQNGNHVVQKCI 554
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + + L D F+ L+TH G R + ++LE+ T P+Q + +LA L
Sbjct: 555 E-CVDP----VALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHCT-PEQTAPILAELHAN 608
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED L+ V ++ K V++ CV ++ A
Sbjct: 609 TEHLIQDQYGNYVIQHVLEHGKPEDKSALIASVRGKVLILSQHKFASNVVEKCVTHATRA 668
Query: 327 QRERLVAEIIA----NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+R L+ E+ + ++ +D Y NYVVQ ++ + P LL ++ H S
Sbjct: 669 ERALLIEEVCSFNDSGLHVMMKDQYANYVVQKMIDVSEPTQRKVLLHKIRPHMNSLKKYT 728
Query: 383 YGSNVVER 390
YG +++ +
Sbjct: 729 YGKHIIAK 736
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 93/186 (50%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + + NE+ Y
Sbjct: 407 RLLEDFRNQRYPNLQLRDLTNHIVEFSQDQHGSRFIQQKLERAISVEKQLVFNEILGAAY 466
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q++ L ++ + L LA YG V+Q L +
Sbjct: 467 SLMTDVFGNYVIQKFFEFGSPEQKQALAQQVKGHVLPLALQMYGCRVIQKALESIPAEQQ 526
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + + + II+ R+ V L HP+G
Sbjct: 527 QEIVRELDGHVLKCVKDQNGNHVVQKC-IECVDPVALQFIIDAFRN-QVYSLSTHPYGCR 584
Query: 425 VIQSAL 430
VIQ L
Sbjct: 585 VIQRIL 590
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 61/133 (45%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +L N L +DQYG +Q + E+ + V +V L F + VV+K
Sbjct: 602 LAELHANTEHLIQDQYGNYVIQHVLEHGKPEDKSALIASVRGKVLILSQHKFASNVVEKC 661
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + +R ++ + + + + + + V++ + +++ P Q ++L +RP
Sbjct: 662 VTHATRAERALLIEEVCSFNDSGLHVMMKDQYANYVVQKMIDVSEPTQRKVLLHKIRPHM 721
Query: 268 VTLTKDTNGHYVI 280
+L K T G ++I
Sbjct: 722 NSLKKYTYGKHII 734
>gi|17224452|gb|AAL36981.1|AF272350_1 translational repressor pumilio [Homo sapiens]
Length = 876
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 519 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 578
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 579 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 635
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 636 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 694
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 695 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 754
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 755 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 814
Query: 426 IQSAL 430
+Q +
Sbjct: 815 VQKMI 819
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ + E+
Sbjct: 589 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELD 648
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 649 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 703
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 704 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 762
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 763 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMA 822
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 823 EPAQRKIIMHKIRPHITTLRKYTYGKHILAK 853
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + L+ YGCR +QR + E+ I E+ +L+
Sbjct: 677 QFIIDAF--------KGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ 728
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L L+ F +V C+ TH RA
Sbjct: 729 DQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALL 787
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +++ +RP TL K T G
Sbjct: 788 IDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYG 847
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 848 KHILAKLEKYY 858
>gi|297834954|ref|XP_002885359.1| hypothetical protein ARALYDRAFT_342166 [Arabidopsis lyrata subsp.
lyrata]
gi|297331199|gb|EFH61618.1| hypothetical protein ARALYDRAFT_342166 [Arabidopsis lyrata subsp.
lyrata]
Length = 965
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 150/293 (51%), Gaps = 10/293 (3%)
Query: 148 LRDLRGNIVALAK-DQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
L D+ G +V DQ+G R +Q+ + EE +F EV+ + +LM D FGNYV+QK
Sbjct: 629 LSDIAGRVVEFRHVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQK 688
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
+E + QR ++ L Q+V + L +G R + K LE + Q+ L+ L
Sbjct: 689 FIEHGTPAQREELVKQLAG---QMVSLSLQMYGCRVIQKALEVIDVDQKTELI-RELDGN 744
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKG 325
+ +D NG++VIQ C++ +++ ++T GC V+Q +E+ S
Sbjct: 745 VLKCVRDQNGNHVIQKCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDD 804
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
+ ++ EI+ +A LA D YGNYV QH+L P ++ +L G+ V S +KY S
Sbjct: 805 EETHCIIDEILESAFALAHDQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMSQHKYAS 864
Query: 386 NVVERCLLESGEEQSTRIIIELLRSP----NVSMLLMHPFGNYVIQSALLVSK 434
NVVE+CL + + +I E++ ++ ++ F NYV+Q L +SK
Sbjct: 865 NVVEKCLEHADSTEREFLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVLEISK 917
>gi|24645262|ref|NP_731314.1| pumilio, isoform A [Drosophila melanogaster]
gi|24645264|ref|NP_524285.2| pumilio, isoform C [Drosophila melanogaster]
gi|24645266|ref|NP_731315.1| pumilio, isoform D [Drosophila melanogaster]
gi|442618162|ref|NP_001262403.1| pumilio, isoform G [Drosophila melanogaster]
gi|34978383|sp|P25822.2|PUM_DROME RecName: Full=Maternal protein pumilio
gi|23170765|gb|AAF54340.2| pumilio, isoform A [Drosophila melanogaster]
gi|23170766|gb|AAN13409.1| pumilio, isoform C [Drosophila melanogaster]
gi|23170767|gb|AAN13410.1| pumilio, isoform D [Drosophila melanogaster]
gi|440217234|gb|AGB95785.1| pumilio, isoform G [Drosophila melanogaster]
Length = 1533
Score = 148 bits (374), Expect = 5e-33, Method: Composition-based stats.
Identities = 85/289 (29%), Positives = 153/289 (52%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK
Sbjct: 1109 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 1168
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+ + + + QL L +G R + K LE+++ P+Q ++ L
Sbjct: 1169 FEFGTPEQKNTLGMQVKGHVLQLA---LQMYGCRVIQKALESIS-PEQQQEIVHELDGHV 1224
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++N Y ++T GC V+Q +E+ Q
Sbjct: 1225 LKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQ 1284
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L + + L+ + G + S +K+ SNV
Sbjct: 1285 TTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNV 1344
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + T +I E+ + +++ + NYV+Q + VS+
Sbjct: 1345 VEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSE 1393
Score = 102 bits (253), Expect = 6e-19, Method: Composition-based stats.
Identities = 70/243 (28%), Positives = 125/243 (51%), Gaps = 12/243 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +E
Sbjct: 1184 VKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIE- 1242
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + + L + F+ L+TH G R + ++LE+ T +Q + +L L
Sbjct: 1243 CVDP----VALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCT-AEQTTPILDELHEHTE 1297
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED L+N V ++ K V++ CV ++ +R
Sbjct: 1298 QLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGER 1357
Query: 329 ERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H + YG
Sbjct: 1358 TGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYG 1417
Query: 385 SNV 387
++
Sbjct: 1418 KHI 1420
Score = 69.7 bits (169), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + + + +E+ Y
Sbjct: 1094 RLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAY 1153
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q+ L ++ + L LA YG V+Q L P+
Sbjct: 1154 SLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQ 1213
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++ +L+GH + ++ G++VV++C +E + + + II + V L HP+G
Sbjct: 1214 QEIVHELDGHVLKCVKDQNGNHVVQKC-IECVDPVALQFIINAFKG-QVYSLSTHPYGCR 1271
Query: 425 VIQSAL 430
VIQ L
Sbjct: 1272 VIQRIL 1277
Score = 39.7 bits (91), Expect = 3.2, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 61/132 (46%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +L + L +DQYG +Q + +E+ ++ V +V L F + VV+K
Sbjct: 1289 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 1348
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + +RT ++ + + + + + V++ + +++ P Q+ ++ +RP
Sbjct: 1349 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHM 1408
Query: 268 VTLTKDTNGHYV 279
L K T G ++
Sbjct: 1409 AALRKYTYGKHI 1420
>gi|327261367|ref|XP_003215502.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 2-like [Anolis
carolinensis]
Length = 1180
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 163/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 823 RSRLLEDFRNNRFPNLQLRDLVGHIVEFSRDQHGSRFIQQKLERATPAERQMVFSEILQA 882
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 883 AYQLMTDVFGNYVIQKFFEFGSIDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 939
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
+ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 940 SPDQQNEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 998
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 999 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVTE 1058
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 1059 IRGKVLTLSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 1118
Query: 426 IQSAL 430
+Q +
Sbjct: 1119 VQKMI 1123
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 128/250 (51%), Gaps = 17/250 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSL-PKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
+RG+++ LA YGCR +Q+ + S+ P ++ EM+ E+ V + + D GN+VVQK +E
Sbjct: 915 IRGHVLPLALQMYGCRVIQKALESISPDQQNEMV-KELDGHVLKCVKDQNGNHVVQKCIE 973
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGA 267
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 974 -CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHT 1027
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
L +D G+YVIQ+ ++H ED ++ E+ ++ K V++ CV ++ A+
Sbjct: 1028 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVTEIRGKVLTLSQHKFASNVVEKCVTHASRAE 1087
Query: 328 RERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSC 380
R L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 1088 RALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRK 1147
Query: 381 NKYGSNVVER 390
YG +++ +
Sbjct: 1148 YTYGKHILAK 1157
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 987 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1046
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 1047 GRPEDKSKIVTEIRGKVLTLSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 1105
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 1106 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1162
>gi|157818169|ref|NP_001100185.1| pumilio homolog 2 [Rattus norvegicus]
gi|149050904|gb|EDM03077.1| pumilio 2 (Drosophila) [Rattus norvegicus]
Length = 1061
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 163/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 704 RSRLLEDFRNNRFPNLQLRDLMGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEIVQA 763
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + ++ + L +G R + K LE++
Sbjct: 764 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALANRIRGHVLPLALQMYGCRVIQKALESI 820
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 821 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 879
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 880 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 939
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 940 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 999
Query: 426 IQSAL 430
+Q +
Sbjct: 1000 VQKMI 1004
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 796 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 854
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 855 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 909
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 910 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 969
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 970 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 1029
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1030 TYGKHILAK 1038
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 868 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 927
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 928 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 986
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 987 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1043
>gi|224048793|ref|XP_002187244.1| PREDICTED: pumilio homolog 2 [Taeniopygia guttata]
Length = 1061
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 163/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 704 RSRLLEDFRNNRFPNLQLRDLVGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 763
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 764 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 820
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
+ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 821 SPDQQNEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 879
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 880 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 939
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 940 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 999
Query: 426 IQSAL 430
+Q +
Sbjct: 1000 VQKMI 1004
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 136/272 (50%), Gaps = 24/272 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSL-PKEEIEMIFVEV 187
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ P ++ EM+ E+
Sbjct: 774 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISPDQQNEMV-KEL 832
Query: 188 IDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLK 245
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + +
Sbjct: 833 DGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQR 887
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
+LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+
Sbjct: 888 ILEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLA 946
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLAL 358
++ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 947 LSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDM 1006
Query: 359 RVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1007 AEPAQRKIIMHKIRPHITTLRKYTYGKHILAK 1038
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 868 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 927
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 928 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 986
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 987 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1043
>gi|170063110|ref|XP_001866961.1| pumilio [Culex quinquefasciatus]
gi|167880847|gb|EDS44230.1| pumilio [Culex quinquefasciatus]
Length = 852
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 153/289 (52%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +++F E++ LM D FGNYV+QK
Sbjct: 442 LRDLTNHIVEFSQDQHGSRFIQQKLERATAAEKQLVFNEILGAAYSLMTDVFGNYVIQKF 501
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ + + ++ + L +G R + K LE++ QQ +V L
Sbjct: 502 FEFGSPEQKQALAQQVKG---HVLPLALQMYGCRVIQKALESIPAEQQQEIVRE-LDGHV 557
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ +++++ + Y ++T GC V+Q +E+ Q
Sbjct: 558 LKCVKDQNGNHVVQKCIECVDPVALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHCTQEQ 617
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ AN L +D YGNYV+QH+L P+ + L+ + G + S +K+ SNV
Sbjct: 618 TAPILGELHANTEQLIQDQYGNYVIQHVLEHGKPEDKSVLIAAVRGKVLILSQHKFASNV 677
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ + +++ + NYV+Q + VS+
Sbjct: 678 VEKCVTHATRAERALLIEEVCSFNDAGLHVMMKDQYANYVVQKMIDVSE 726
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 127/248 (51%), Gaps = 12/248 (4%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ ++G+++ LA YGCR +Q+ + S+P E+ + I E+ V + + D GN+VVQK +
Sbjct: 515 QQVKGHVLPLALQMYGCRVIQKALESIPAEQQQEIVRELDGHVLKCVKDQNGNHVVQKCI 574
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + + L D F+ L+TH G R + ++LE+ T +Q + +L L
Sbjct: 575 E-CVDP----VALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHCTQ-EQTAPILGELHAN 628
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED L+ V ++ K V++ CV ++ A
Sbjct: 629 TEQLIQDQYGNYVIQHVLEHGKPEDKSVLIAAVRGKVLILSQHKFASNVVEKCVTHATRA 688
Query: 327 QRERLVAEII----ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+R L+ E+ A ++ +D Y NYVVQ ++ + P LL ++ H S
Sbjct: 689 ERALLIEEVCSFNDAGLHVMMKDQYANYVVQKMIDVSEPTQRKVLLHKIRPHMNSLKKYT 748
Query: 383 YGSNVVER 390
YG +++ +
Sbjct: 749 YGKHIIAK 756
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + + + NE+ Y
Sbjct: 427 RLLEDFRNQRYPNLQLRDLTNHIVEFSQDQHGSRFIQQKLERATAAEKQLVFNEILGAAY 486
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q++ L ++ + L LA YG V+Q L +
Sbjct: 487 SLMTDVFGNYVIQKFFEFGSPEQKQALAQQVKGHVLPLALQMYGCRVIQKALESIPAEQQ 546
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + + + II+ R+ V L HP+G
Sbjct: 547 QEIVRELDGHVLKCVKDQNGNHVVQKC-IECVDPVALQFIIDAFRN-QVYSLSTHPYGCR 604
Query: 425 VIQSAL 430
VIQ L
Sbjct: 605 VIQRIL 610
>gi|401828248|ref|XP_003888416.1| RNA binding repeat domain-containing protein [Encephalitozoon
hellem ATCC 50504]
gi|392999688|gb|AFM99435.1| RNA binding repeat domain-containing protein [Encephalitozoon
hellem ATCC 50504]
Length = 529
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 165/292 (56%), Gaps = 15/292 (5%)
Query: 140 QDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPF 199
++ F +S++++ ++++KDQ G R +QR M ++ KEEI F + D +L + F
Sbjct: 209 KNVFGGTSMKEI---CISVSKDQEGSRCIQRKMDNISKEEISWFFNNIADAAADLSANLF 265
Query: 200 GNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLV 259
GNYV+QK++ L +EE+RTR+ L Q+ + ++ +G R + KL++ +P + +
Sbjct: 266 GNYVIQKIIPLLTEEERTRLTASLVG---QIHLLSVHPYGCRVIQKLVD--VSP-DVDFI 319
Query: 260 LAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHC 319
L ++ + L +D NG++VIQ C++ +D + +L + ++N +AT K GC V+Q
Sbjct: 320 LEEVKGNLLELIEDQNGNHVIQKCIEKC--KDRRIILKQFSENSLFLATHKYGCRVIQRM 377
Query: 320 VEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFS 379
+E+ K + + +V +I+N L +D YGNYV+QH+L + + ++ ++ S
Sbjct: 378 LEFCKEEEIKDIVEVLISNIKTLVDDQYGNYVIQHILTVGKEKERNLVIEKIIEKSYELS 437
Query: 380 CNKYGSNVVERCLLESGEEQSTRIIIELLR----SPNVSMLLMHPFGNYVIQ 427
K+ SNVVE+C+ S Q + + + L P + + + +GNYV+Q
Sbjct: 438 KCKFSSNVVEQCVKLSNNGQREQFLEKFLEPVGAKPGMYSMCIDMYGNYVVQ 489
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 104/213 (48%), Gaps = 18/213 (8%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G I L+ YGCR +Q+ + P +++ I EV + EL+ D GN+V+QK +E
Sbjct: 289 LVGQIHLLSVHPYGCRVIQKLVDVSP--DVDFILEEVKGNLLELIEDQNGNHVIQKCIEK 346
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + RI+L F + L TH G R + ++LE ++I ++ L
Sbjct: 347 CKDR---RIILK----QFSENSLFLATHKYGCRVIQRMLE-FCKEEEIKDIVEVLISNIK 398
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
TL D G+YVIQ+ + ++ ++ ++ + Y ++ K V++ CV+ S QR
Sbjct: 399 TLVDDQYGNYVIQHILTVGKEKERNLVIEKIIEKSYELSKCKFSSNVVEQCVKLSNNGQR 458
Query: 329 ERLVAEIIA------NALLLAEDCYGNYVVQHL 355
E+ + + + + D YGNYVVQ L
Sbjct: 459 EQFLEKFLEPVGAKPGMYSMCIDMYGNYVVQRL 491
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 104/204 (50%), Gaps = 7/204 (3%)
Query: 231 VRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHE 290
+ + + G R + + ++N++ ++IS + A L+ + G+YVIQ + + E
Sbjct: 222 ISVSKDQEGSRCIQRKMDNISK-EEISWFFNNIADAAADLSANLFGNYVIQKIIPLLTEE 280
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ L + + ++ GC V+Q V+ S + ++ E+ N L L ED GN+
Sbjct: 281 ERTRLTASLVGQIHLLSVHPYGCRVIQKLVDVSPDV--DFILEEVKGNLLELIEDQNGNH 338
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
V+Q + + +L+Q + + + +KYG V++R +LE +E+ + I+E+L S
Sbjct: 339 VIQK--CIEKCKDRRIILKQFSENSLFLATHKYGCRVIQR-MLEFCKEEEIKDIVEVLIS 395
Query: 411 PNVSMLLMHPFGNYVIQSALLVSK 434
N+ L+ +GNYVIQ L V K
Sbjct: 396 -NIKTLVDDQYGNYVIQHILTVGK 418
>gi|218202388|gb|EEC84815.1| hypothetical protein OsI_31896 [Oryza sativa Indica Group]
Length = 988
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 150/288 (52%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D++G IV + DQ G R +Q+ + + EE +++F EV+ ELM D FGNYV+QK
Sbjct: 649 LADIKGQIVKYSSDQNGSRFIQQKLENCTIEEKDLLFAEVLPHALELMTDVFGNYVIQKF 708
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S +Q+ I L F L L +G R + K LE + Q+I LV L
Sbjct: 709 FEKGSPQQKREIANKLAGHVFSL---SLQMYGCRVIQKALEVIDLEQKIVLV-GELDGHV 764
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGA 326
+ D NG++VIQ C++ E +L++ ++ GC V+Q +E S +
Sbjct: 765 LRCVHDQNGNHVIQKCIECIPLEHIGFLVSSFQCQVAKLSMHTYGCRVIQRILERCSNNS 824
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ ++ EI+ +A +LA+D YGNYVVQH+L ++ +L G V S NK+ SN
Sbjct: 825 ECLCIIDEILQSACILAQDQYGNYVVQHVLEKGNEHERGQIITKLAGQVVPMSQNKFASN 884
Query: 387 VVERCLLESGEEQSTRIIIELLRSP---NVSMLLMHP-FGNYVIQSAL 430
V+ERC G + ++ E+L+ N +++M + NYV+Q L
Sbjct: 885 VIERCFEHGGSAERELLVKEILKQTEGNNYLLVIMKDQYANYVVQKML 932
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 124/244 (50%), Gaps = 9/244 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G++ +L+ YGCR +Q+ + + E+ ++ E+ V + D GN+V+QK +E
Sbjct: 724 LAGHVFSLSLQMYGCRVIQKALEVIDLEQKIVLVGELDGHVLRCVHDQNGNHVIQKCIEC 783
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E I ++++ Q+ ++ ++T+G R + ++LE +N + ++ + A L
Sbjct: 784 IPLEH---IGFLVSSFQCQVAKLSMHTYGCRVIQRILERCSNNSECLCIIDEILQSACIL 840
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YV+Q+ ++ + + ++ ++A ++ +K V++ C E+ A+RE
Sbjct: 841 AQDQYGNYVVQHVLEKGNEHERGQIITKLAGQVVPMSQNKFASNVIERCFEHGGSAEREL 900
Query: 331 LVAEIIANA------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
LV EI+ L++ +D Y NYVVQ +L Q LL +++ H Y
Sbjct: 901 LVKEILKQTEGNNYLLVIMKDQYANYVVQKMLTTCNEQHKEILLSRVKIHLPLLKKYTYA 960
Query: 385 SNVV 388
++V
Sbjct: 961 KHIV 964
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
+E L + + + LA ++ V + D NG IQ +++ + E+ L EV + +
Sbjct: 636 VEELISSRTHRVELADIKGQIVKYSSDQNGSRFIQQKLENCTIEEKDLLFAEVLPHALEL 695
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITAS 366
TD G V+Q E Q+ + ++ + L+ YG V+Q L + +
Sbjct: 696 MTDVFGNYVIQKFFEKGSPQQKREIANKLAGHVFSLSLQMYGCRVIQKALEVIDLEQKIV 755
Query: 367 LLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVI 426
L+ +L+GH + ++ G++V+++C +E + ++ + V+ L MH +G VI
Sbjct: 756 LVGELDGHVLRCVHDQNGNHVIQKC-IECIPLEHIGFLVSSFQC-QVAKLSMHTYGCRVI 813
Query: 427 QSAL 430
Q L
Sbjct: 814 QRIL 817
>gi|195452258|ref|XP_002073278.1| GK14049 [Drosophila willistoni]
gi|194169363|gb|EDW84264.1| GK14049 [Drosophila willistoni]
Length = 873
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 153/289 (52%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK
Sbjct: 447 LRDLTNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKF 506
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+ + + + QL L +G R + K LE+++ P+Q ++ L
Sbjct: 507 FEFGTPEQKNTLGMQVKGHVLQL---ALQMYGCRVIQKALESIS-PEQQQEIVHELDGHV 562
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++N Y ++T GC V+Q +E+ Q
Sbjct: 563 LKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQ 622
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L + + L+ + G + S +K+ SNV
Sbjct: 623 TTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILITSVRGKVLVLSQHKFASNV 682
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + T +I E+ + +++ + NYV+Q + VS+
Sbjct: 683 VEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSE 731
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 124/244 (50%), Gaps = 12/244 (4%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
++G+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +E
Sbjct: 521 QVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIE 580
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGA 267
C + + L + F+ L+TH G R + ++LE+ T +Q + +L L
Sbjct: 581 -CVDP----VALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTA-EQTTPILDELHEHT 634
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
L +D G+YVIQ+ ++H ED L+ V ++ K V++ CV ++ +
Sbjct: 635 EQLIQDQYGNYVIQHVLEHGKQEDKSILITSVRGKVLVLSQHKFASNVVEKCVTHATRGE 694
Query: 328 RERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
R L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H + Y
Sbjct: 695 RTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTY 754
Query: 384 GSNV 387
G ++
Sbjct: 755 GKHI 758
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + + + +E+ Y
Sbjct: 432 RLLEDFRNQRYPNLQLRDLTNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAY 491
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q+ L ++ + L LA YG V+Q L P+
Sbjct: 492 SLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQ 551
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++ +L+GH + ++ G++VV++C +E + + + II + V L HP+G
Sbjct: 552 QEIVHELDGHVLKCVKDQNGNHVVQKC-IECVDPVALQFIINAFKG-QVYSLSTHPYGCR 609
Query: 425 VIQSAL 430
VIQ L
Sbjct: 610 VIQRIL 615
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +L + L +DQYG +Q + +E+ ++ V +V L F + VV+K
Sbjct: 627 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILITSVRGKVLVLSQHKFASNVVEKC 686
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + +RT ++ + + + + + V++ + +++ P Q+ ++ +RP
Sbjct: 687 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHM 746
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCV 315
L K T G KH + + KY + ++ + AT G V
Sbjct: 747 AALRKYTYG--------KHINAKLEKYYM-KITNPMAATATSAVGGGV 785
>gi|125562207|gb|EAZ07655.1| hypothetical protein OsI_29908 [Oryza sativa Indica Group]
Length = 1806
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 151/288 (52%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G+IV + DQ+G R +Q+ + + EE +F EV+ LM D FGNYV+QK
Sbjct: 1468 LSDIAGHIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKF 1527
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQR + L ++ + L +G R + K LE + Q+I LV L
Sbjct: 1528 FEHGTPEQRRDLATKLVG---HVLPLSLQMYGCRVIQKALEVMELDQKIELV-RELDGNI 1583
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG-A 326
+ +D NG++VIQ C++ E ++++ ++ GC V+Q +E+ G +
Sbjct: 1584 MRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDS 1643
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q + ++ EI+ +A +LA+D YGNYV QH+L ++ +L G V+ S NK+ SN
Sbjct: 1644 QGQCIIDEILESACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASN 1703
Query: 387 VVERCLLESGEEQSTRIIIELLR----SPNVSMLLMHPFGNYVIQSAL 430
V+E+C + +I E+++ + N+ ++ + NYV+Q L
Sbjct: 1704 VIEKCFQHGDMTERDLLIREIVKQTEGNDNLLAMMKDQYANYVVQKIL 1751
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 119/243 (48%), Gaps = 9/243 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G+++ L+ YGCR +Q+ + + ++ + E+ + + D GN+V+QK +E
Sbjct: 1543 LVGHVLPLSLQMYGCRVIQKALEVMELDQKIELVRELDGNIMRCVRDQNGNHVIQKCIEC 1602
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E I +++ Q+ + ++ +G R + ++LE+ Q ++ + A L
Sbjct: 1603 VPTEH---IGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIIDEILESACVL 1659
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YV Q+ ++ + +++++A ++ +K V++ C ++ +R+
Sbjct: 1660 AQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNVIEKCFQHGDMTERDL 1719
Query: 331 LVAEIIA------NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ EI+ N L + +D Y NYVVQ +L Q LL +++GH + YG
Sbjct: 1720 LIREIVKQTEGNDNLLAMMKDQYANYVVQKILETCNEQQRELLLSRVKGHLQALRKYTYG 1779
Query: 385 SNV 387
++
Sbjct: 1780 KHI 1782
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LE L + + + L+ + V + D +G IQ +++ + E+ + +EV +
Sbjct: 1454 FLEELKSNRARRVELSDIAGHIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASS 1513
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ QR L +++ + L L+ YG V+Q L +
Sbjct: 1514 LMTDVFGNYVIQKFFEHGTPEQRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKI 1573
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
L+R+L+G+ + ++ G++V+++C +E + ++ R V+ L MHP+G V
Sbjct: 1574 ELVRELDGNIMRCVRDQNGNHVIQKC-IECVPTEHIGFVVSAFRG-QVASLSMHPYGCRV 1631
Query: 426 IQSAL 430
IQ L
Sbjct: 1632 IQRVL 1636
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI------DRVCELMIDPFGN 201
+ L G +V ++++++ +++ E +++ E++ D + +M D + N
Sbjct: 1685 ISKLAGQVVTMSQNKFASNVIEKCFQHGDMTERDLLIREIVKQTEGNDNLLAMMKDQYAN 1744
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLT 251
YVVQK++E C+E+QR +LL Q +R I ++LE L
Sbjct: 1745 YVVQKILETCNEQQR-ELLLSRVKGHLQALRKYTYGKHIETPSQILEKLA 1793
>gi|74148485|dbj|BAE36346.1| unnamed protein product [Mus musculus]
Length = 534
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +++F E++
Sbjct: 177 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQA 236
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 237 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGYRVIQKALESI 293
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 294 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 352
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 353 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 412
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLMHP--FGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 413 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 472
Query: 426 IQSAL 430
+Q +
Sbjct: 473 VQKMI 477
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 132/271 (48%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YG R +Q+ + S+ ++ + E+
Sbjct: 247 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGYRVIQKALESISSDQQSEMVKELD 306
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 307 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 361
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 362 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 420
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 421 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMA 480
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 481 EPAQRKIIMHKIRPHITTLRKYTYGKHILAK 511
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 106/215 (49%), Gaps = 11/215 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+++L G+++ KDQ G +Q+ + + + ++ I +V L P+G V+Q++
Sbjct: 302 VKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRI 361
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E C+ EQ IL L QLV+ + +G + +LE+ P+ S +++ +R
Sbjct: 362 LEHCTAEQTLPILEELHQHTEQLVQ---DQYGNYVIQHVLEH-GRPEDKSKIVSEIRGKV 417
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVA-------DNCYGIATDKSGCCVLQHCV 320
+ L++ V++ CV H S + L++EV Y + D+ V+Q +
Sbjct: 418 LALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI 477
Query: 321 EYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHL 355
+ ++ AQR+ ++ +I + L + YG +++ L
Sbjct: 478 DMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKL 512
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + L+ YGCR +QR + E+ I E+ +L+
Sbjct: 335 QFIIDAF--------KGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ 386
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L L+ F +V C+ TH RA
Sbjct: 387 DQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALL 445
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +++ +RP TL K T G
Sbjct: 446 IDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYG 505
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 506 KHILAKLEKYY 516
>gi|449268799|gb|EMC79640.1| Pumilio like protein 2 [Columba livia]
Length = 1062
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 163/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 705 RSRLLEDFRNNRFPNLQLRDLVGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 764
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 765 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 821
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
+ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 822 SPDQQNEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 880
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 881 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 940
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 941 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 1000
Query: 426 IQSAL 430
+Q +
Sbjct: 1001 VQKMI 1005
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 136/272 (50%), Gaps = 24/272 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSL-PKEEIEMIFVEV 187
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ P ++ EM+ E+
Sbjct: 775 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISPDQQNEMV-KEL 833
Query: 188 IDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLK 245
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + +
Sbjct: 834 DGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQR 888
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
+LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+
Sbjct: 889 ILEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLA 947
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLAL 358
++ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 948 LSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDM 1007
Query: 359 RVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1008 AEPAQRKIIMHKIRPHITTLRKYTYGKHILAK 1039
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 869 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 928
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 929 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 987
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 988 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1044
>gi|222640878|gb|EEE69010.1| hypothetical protein OsJ_27957 [Oryza sativa Japonica Group]
Length = 1138
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 151/288 (52%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G+IV + DQ+G R +Q+ + + EE +F EV+ LM D FGNYV+QK
Sbjct: 807 LSDIAGHIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKF 866
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQR + L ++ + L +G R + K LE + Q+I LV L
Sbjct: 867 FEHGTPEQRRDLATKLVG---HVLPLSLQMYGCRVIQKALEVMELDQKIELV-RELDGNI 922
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG-A 326
+ +D NG++VIQ C++ E ++++ ++ GC V+Q +E+ G +
Sbjct: 923 MRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDS 982
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q + ++ EI+ +A +LA+D YGNYV QH+L ++ +L G V+ S NK+ SN
Sbjct: 983 QGQCIIDEILESACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASN 1042
Query: 387 VVERCLLESGEEQSTRIIIELLR----SPNVSMLLMHPFGNYVIQSAL 430
V+E+C + +I E+++ + N+ ++ + NYV+Q L
Sbjct: 1043 VIEKCFQHGDMTERDLLIREIVKQTEGNDNLLAMMKDQYANYVVQKIL 1090
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 123/253 (48%), Gaps = 9/253 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G+++ L+ YGCR +Q+ + + ++ + E+ + + D GN+V+QK +E
Sbjct: 882 LVGHVLPLSLQMYGCRVIQKALEVMELDQKIELVRELDGNIMRCVRDQNGNHVIQKCIEC 941
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E I +++ Q+ + ++ +G R + ++LE+ Q ++ + A L
Sbjct: 942 VPTEH---IGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIIDEILESACVL 998
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YV Q+ ++ + +++++A ++ +K V++ C ++ +R+
Sbjct: 999 AQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNVIEKCFQHGDMTERDL 1058
Query: 331 LVAEIIA------NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ EI+ N L + +D Y NYVVQ +L Q LL +++GH + YG
Sbjct: 1059 LIREIVKQTEGNDNLLAMMKDQYANYVVQKILETCNEQQRELLLSRVKGHLQALRKYTYG 1118
Query: 385 SNVVERCLLESGE 397
++V R GE
Sbjct: 1119 KHIVSRVEQLCGE 1131
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LE L + + + L+ + V + D +G IQ +++ + E+ + +EV +
Sbjct: 793 FLEELKSNRARRVELSDIAGHIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASS 852
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ QR L +++ + L L+ YG V+Q L +
Sbjct: 853 LMTDVFGNYVIQKFFEHGTPEQRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKI 912
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
L+R+L+G+ + ++ G++V+++C +E + ++ R V+ L MHP+G V
Sbjct: 913 ELVRELDGNIMRCVRDQNGNHVIQKC-IECVPTEHIGFVVSAFRG-QVASLSMHPYGCRV 970
Query: 426 IQSAL 430
IQ L
Sbjct: 971 IQRVL 975
>gi|326916555|ref|XP_003204572.1| PREDICTED: pumilio homolog 2-like [Meleagris gallopavo]
Length = 1061
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 163/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 704 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 763
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 764 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 820
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
+ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 821 SPDQQNEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 879
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 880 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 939
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 940 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 999
Query: 426 IQSAL 430
+Q +
Sbjct: 1000 VQKMI 1004
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 136/272 (50%), Gaps = 24/272 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSL-PKEEIEMIFVEV 187
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ P ++ EM+ E+
Sbjct: 774 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISPDQQNEMV-KEL 832
Query: 188 IDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLK 245
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + +
Sbjct: 833 DGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQR 887
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
+LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+
Sbjct: 888 ILEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLA 946
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLAL 358
++ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 947 LSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDM 1006
Query: 359 RVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1007 AEPAQRKIIMHKIRPHITTLRKYTYGKHILAK 1038
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 868 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 927
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 928 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 986
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 987 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1043
>gi|86129498|ref|NP_001034381.1| pumilio homolog 2 [Gallus gallus]
gi|82569974|gb|ABB83589.1| pumilio 2 [Gallus gallus]
Length = 1061
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 163/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 704 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 763
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 764 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 820
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
+ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 821 SPDQQNEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 879
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 880 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 939
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 940 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 999
Query: 426 IQSAL 430
+Q +
Sbjct: 1000 VQKMI 1004
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 136/272 (50%), Gaps = 24/272 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSL-PKEEIEMIFVEV 187
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ P ++ EM+ E+
Sbjct: 774 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISPDQQNEMV-KEL 832
Query: 188 IDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLK 245
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + +
Sbjct: 833 DGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQR 887
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
+LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+
Sbjct: 888 ILEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLA 946
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLAL 358
++ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 947 LSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDM 1006
Query: 359 RVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1007 AEPAQRKIIMHKIRPHITTLRKYTYGKHILAK 1038
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 868 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 927
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 928 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 986
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 987 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1043
>gi|308510969|ref|XP_003117667.1| CRE-PUF-9 protein [Caenorhabditis remanei]
gi|308238313|gb|EFO82265.1| CRE-PUF-9 protein [Caenorhabditis remanei]
Length = 714
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 158/297 (53%), Gaps = 14/297 (4%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
+L+D++ N++ AKDQ+G R +Q+ + + +IF V++ ELM D FGNYV+QK
Sbjct: 354 TLQDIKNNVIEFAKDQHGSRFIQQKLERASIRDKAVIFTPVLEHAEELMTDVFGNYVIQK 413
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E + EQR ++ + + ++++ L +G R + K LE + Q +L +
Sbjct: 414 FFEFGNNEQRNLLVGTIRGN---VMKLALQMYGCRVIQKALEYVEEKYQHE-ILGEMEGQ 469
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV----ADNCYGIATDKSGCCVLQHCVEY 322
+ KD NG++VIQ ++ + +++++ +DN Y ++ GC V+Q +EY
Sbjct: 470 VLKCVKDQNGNHVIQKVIERVEPDRLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLEY 529
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ-LEGHYVSFSCN 381
Q++ ++ + + L D YGNYV+QH++ P+ +++ + + ++ +
Sbjct: 530 CNDEQKQPVLDALNLHLKQLVLDQYGNYVIQHVIEHGSPKDKEQIVQDVINDDLLKYAQH 589
Query: 382 KYGSNVVERCLLESGEEQSTRIIIELLRSPN-----VSMLLMHPFGNYVIQSALLVS 433
K+ SNV+E+CL G+ + II ++ PN + ++ PF NYV+Q L V+
Sbjct: 590 KFASNVIEKCLTFGGDAERNIIIDKVCGDPNDPSPPLLQMMKDPFANYVVQKMLDVA 646
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 128/251 (50%), Gaps = 10/251 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RGN++ LA YGCR +Q+ + + ++ I E+ +V + + D GN+V+QK++E
Sbjct: 430 IRGNVMKLALQMYGCRVIQKALEYVEEKYQHEILGEMEGQVLKCVKDQNGNHVIQKVIER 489
Query: 211 CSEEQRTRILLMLT-NDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
++ I+ T N+ + + ++ +G R + ++LE N +Q VL AL
Sbjct: 490 VEPDRLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLE-YCNDEQKQPVLDALNLHLKQ 548
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVA-DNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L D G+YVIQ+ ++H S +D + ++ +V D+ A K V++ C+ + A+R
Sbjct: 549 LVLDQYGNYVIQHVIEHGSPKDKEQIVQDVINDDLLKYAQHKFASNVIEKCLTFGGDAER 608
Query: 329 ERLVAEIIANA-------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
++ ++ + L + +D + NYVVQ +L + PQ + ++ H +
Sbjct: 609 NIIIDKVCGDPNDPSPPLLQMMKDPFANYVVQKMLDVADPQHRKKITLTIKPHIATLRKY 668
Query: 382 KYGSNVVERCL 392
+G +++ + +
Sbjct: 669 NFGKHILRKYI 679
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 11/71 (15%)
Query: 187 VIDRVC-----------ELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICL 235
+ID+VC ++M DPF NYVVQK++++ + R +I L + L +
Sbjct: 611 IIDKVCGDPNDPSPPLLQMMKDPFANYVVQKMLDVADPQHRKKITLTIKPHIATLRKYNF 670
Query: 236 NTHGIRAVLKL 246
H +R +K+
Sbjct: 671 GKHILRKYIKI 681
>gi|115477332|ref|NP_001062262.1| Os08g0519800 [Oryza sativa Japonica Group]
gi|113624231|dbj|BAF24176.1| Os08g0519800 [Oryza sativa Japonica Group]
Length = 1001
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 151/288 (52%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G+IV + DQ+G R +Q+ + + EE +F EV+ LM D FGNYV+QK
Sbjct: 670 LSDIAGHIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKF 729
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQR + L ++ + L +G R + K LE + Q+I LV L
Sbjct: 730 FEHGTPEQRRDLATKLVG---HVLPLSLQMYGCRVIQKALEVMELDQKIELV-RELDGNI 785
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG-A 326
+ +D NG++VIQ C++ E ++++ ++ GC V+Q +E+ G +
Sbjct: 786 MRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDS 845
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q + ++ EI+ +A +LA+D YGNYV QH+L ++ +L G V+ S NK+ SN
Sbjct: 846 QGQCIIDEILESACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASN 905
Query: 387 VVERCLLESGEEQSTRIIIELLR----SPNVSMLLMHPFGNYVIQSAL 430
V+E+C + +I E+++ + N+ ++ + NYV+Q L
Sbjct: 906 VIEKCFQHGDMTERDLLIREIVKQTEGNDNLLAMMKDQYANYVVQKIL 953
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 123/253 (48%), Gaps = 9/253 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G+++ L+ YGCR +Q+ + + ++ + E+ + + D GN+V+QK +E
Sbjct: 745 LVGHVLPLSLQMYGCRVIQKALEVMELDQKIELVRELDGNIMRCVRDQNGNHVIQKCIEC 804
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E I +++ Q+ + ++ +G R + ++LE+ Q ++ + A L
Sbjct: 805 VPTEH---IGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIIDEILESACVL 861
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YV Q+ ++ + +++++A ++ +K V++ C ++ +R+
Sbjct: 862 AQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNVIEKCFQHGDMTERDL 921
Query: 331 LVAEIIA------NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ EI+ N L + +D Y NYVVQ +L Q LL +++GH + YG
Sbjct: 922 LIREIVKQTEGNDNLLAMMKDQYANYVVQKILETCNEQQRELLLSRVKGHLQALRKYTYG 981
Query: 385 SNVVERCLLESGE 397
++V R GE
Sbjct: 982 KHIVSRVEQLCGE 994
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LE L + + + L+ + V + D +G IQ +++ + E+ + +EV +
Sbjct: 656 FLEELKSNRARRVELSDIAGHIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASS 715
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ QR L +++ + L L+ YG V+Q L +
Sbjct: 716 LMTDVFGNYVIQKFFEHGTPEQRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKI 775
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
L+R+L+G+ + ++ G++V+++C +E + ++ R V+ L MHP+G V
Sbjct: 776 ELVRELDGNIMRCVRDQNGNHVIQKC-IECVPTEHIGFVVSAFRG-QVASLSMHPYGCRV 833
Query: 426 IQSAL 430
IQ L
Sbjct: 834 IQRVL 838
>gi|115479929|ref|NP_001063558.1| Os09g0497100 [Oryza sativa Japonica Group]
gi|113631791|dbj|BAF25472.1| Os09g0497100 [Oryza sativa Japonica Group]
gi|215678529|dbj|BAG92184.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641849|gb|EEE69981.1| hypothetical protein OsJ_29881 [Oryza sativa Japonica Group]
Length = 988
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 150/288 (52%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D++G IV + DQ G R +Q+ + + EE +++F EV+ ELM D FGNYV+QK
Sbjct: 649 LADIKGQIVKYSSDQNGSRFIQQKLENCTIEEKDLLFAEVLPHALELMTDVFGNYVIQKF 708
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S +Q+ I L F L L +G R + K LE + Q+I LV L
Sbjct: 709 FEKGSPQQKREIANKLAGHVFSL---SLQMYGCRVIQKALEVIDLEQKIVLV-GELDGHV 764
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGA 326
+ D NG++VIQ C++ E +L++ ++ GC V+Q +E S +
Sbjct: 765 LRCVHDQNGNHVIQKCIECIPLEHIGFLVSSFQCQVAKLSMHTYGCRVIQRILERCSNNS 824
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ ++ EI+ +A +LA+D YGNYVVQH+L ++ +L G V S NK+ SN
Sbjct: 825 ECLCIIDEILQSACILAQDQYGNYVVQHVLEKGNEHERGQIITKLAGQVVPMSQNKFASN 884
Query: 387 VVERCLLESGEEQSTRIIIELLRSP---NVSMLLMHP-FGNYVIQSAL 430
V+ERC G + ++ E+L+ N +++M + NYV+Q L
Sbjct: 885 VIERCFEHGGSAERELLVKEILKQTEGNNYLLVIMKDQYANYVVQKML 932
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 124/244 (50%), Gaps = 9/244 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G++ +L+ YGCR +Q+ + + E+ ++ E+ V + D GN+V+QK +E
Sbjct: 724 LAGHVFSLSLQMYGCRVIQKALEVIDLEQKIVLVGELDGHVLRCVHDQNGNHVIQKCIEC 783
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E I ++++ Q+ ++ ++T+G R + ++LE +N + ++ + A L
Sbjct: 784 IPLEH---IGFLVSSFQCQVAKLSMHTYGCRVIQRILERCSNNSECLCIIDEILQSACIL 840
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YV+Q+ ++ + + ++ ++A ++ +K V++ C E+ A+RE
Sbjct: 841 AQDQYGNYVVQHVLEKGNEHERGQIITKLAGQVVPMSQNKFASNVIERCFEHGGSAEREL 900
Query: 331 LVAEIIANA------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
LV EI+ L++ +D Y NYVVQ +L Q LL +++ H Y
Sbjct: 901 LVKEILKQTEGNNYLLVIMKDQYANYVVQKMLTTCNEQHKEILLSRVKIHLPLLKKYTYA 960
Query: 385 SNVV 388
++V
Sbjct: 961 KHIV 964
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
+E L + + + LA ++ V + D NG IQ +++ + E+ L EV + +
Sbjct: 636 VEELISSRTHRVELADIKGQIVKYSSDQNGSRFIQQKLENCTIEEKDLLFAEVLPHALEL 695
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITAS 366
TD G V+Q E Q+ + ++ + L+ YG V+Q L + +
Sbjct: 696 MTDVFGNYVIQKFFEKGSPQQKREIANKLAGHVFSLSLQMYGCRVIQKALEVIDLEQKIV 755
Query: 367 LLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVI 426
L+ +L+GH + ++ G++V+++C +E + ++ + V+ L MH +G VI
Sbjct: 756 LVGELDGHVLRCVHDQNGNHVIQKC-IECIPLEHIGFLVSSFQC-QVAKLSMHTYGCRVI 813
Query: 427 QSAL 430
Q L
Sbjct: 814 QRIL 817
>gi|198433949|ref|XP_002130197.1| PREDICTED: similar to pumilio 2 [Ciona intestinalis]
Length = 1043
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 156/288 (54%), Gaps = 7/288 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +L G+IV ++DQ+G R +Q+ + +E +++F E+I +LM D FGNYV+QK
Sbjct: 688 LHELVGHIVEFSQDQHGSRFIQQKLERATPQEKQLVFNEIIGAAYQLMTDVFGNYVIQKF 747
Query: 208 VELCSEEQRTRILLMLTN-DDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E S E + L L N ++ + L +G R + K LE + QQ+ +V L
Sbjct: 748 FEFGSLEHK----LALANCIHGHVLPLALQMYGCRVIQKALECIPQEQQVEIV-KELDGH 802
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ +++++ G+++ GC V+Q +E+
Sbjct: 803 LLKCVKDQNGNHVVQKCIECVPPAQLQFIVDGFKGQVVGLSSHPYGCRVMQRILEHCNED 862
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ ++ +L +D YGNYV+QH+L + ++ +L G ++ S +K+ SN
Sbjct: 863 QTGPILEELHQHSEMLVKDQYGNYVIQHILEHGRTENKNQIINELRGRILTLSQHKFASN 922
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMH-PFGNYVIQSALLVS 433
V+E+C+ S + +I E+ + P+ ++M + NYV+Q L V+
Sbjct: 923 VIEKCVSHSSPQTRAWLIDEVCQEPDALFIMMKDQYANYVVQKMLDVA 970
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 123/245 (50%), Gaps = 11/245 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+ G+++ LA YGCR +Q+ + +P+E+ I E+ + + + D GN+VVQK +E
Sbjct: 763 IHGHVLPLALQMYGCRVIQKALECIPQEQQVEIVKELDGHLLKCVKDQNGNHVVQKCIEC 822
Query: 211 CSEEQRTRILLMLTNDDF--QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
Q L D F Q+V + + +G R + ++LE+ N Q +L L +
Sbjct: 823 VPPAQ-----LQFIVDGFKGQVVGLSSHPYGCRVMQRILEHC-NEDQTGPILEELHQHSE 876
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L KD G+YVIQ+ ++H E+ ++NE+ ++ K V++ CV +S R
Sbjct: 877 MLVKDQYGNYVIQHILEHGRTENKNQIINELRGRILTLSQHKFASNVIEKCVSHSSPQTR 936
Query: 329 ERLVAEIIANA---LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
L+ E+ ++ +D Y NYVVQ +L + PQ L+ ++ H ++ YG
Sbjct: 937 AWLIDEVCQEPDALFIMMKDQYANYVVQKMLDVADPQQKKLLIHKIRPHILTLRKFTYGK 996
Query: 386 NVVER 390
+++ +
Sbjct: 997 HIITK 1001
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
KLL++ N + + L L V ++D +G IQ ++ + ++ + + NE+ Y
Sbjct: 673 KLLDDFRNNRLTNPHLHELVGHIVEFSQDQHGSRFIQQKLERATPQEKQLVFNEIIGAAY 732
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ + L I + L LA YG V+Q L +
Sbjct: 733 QLMTDVFGNYVIQKFFEFGSLEHKLALANCIHGHVLPLALQMYGCRVIQKALECIPQEQQ 792
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++++L+GH + ++ G++VV++C +E + I++ + V L HP+G
Sbjct: 793 VEIVKELDGHLLKCVKDQNGNHVVQKC-IECVPPAQLQFIVDGFKG-QVVGLSSHPYGCR 850
Query: 425 VIQSAL 430
V+Q L
Sbjct: 851 VMQRIL 856
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 35/172 (20%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G +V L+ YGCR +QR + +++ I E+ L+ D +GNYV+Q ++E
Sbjct: 835 FKGQVVGLSSHPYGCRVMQRILEHCNEDQTGPILEELHQHSEMLVKDQYGNYVIQHILEH 894
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLN--THGIRA----------------- 242
E + +I+ L L+ F ++ C++ + RA
Sbjct: 895 GRTENKNQIINELRGRILTLSQHKFASNVIEKCVSHSSPQTRAWLIDEVCQEPDALFIMM 954
Query: 243 -------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ +PQQ L++ +RP +TL K T G ++I K F
Sbjct: 955 KDQYANYVVQKMLDVADPQQKKLLIHKIRPHILTLRKFTYGKHIITKLEKFF 1006
>gi|42408517|dbj|BAD09696.1| putative pumilio-family RNA-binding domain-containing protein(PPD1)
[Oryza sativa Japonica Group]
gi|42409165|dbj|BAD10431.1| putative pumilio-family RNA-binding domain-containing protein(PPD1)
[Oryza sativa Japonica Group]
gi|215694322|dbj|BAG89315.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1006
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 151/288 (52%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G+IV + DQ+G R +Q+ + + EE +F EV+ LM D FGNYV+QK
Sbjct: 675 LSDIAGHIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKF 734
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQR + L ++ + L +G R + K LE + Q+I LV L
Sbjct: 735 FEHGTPEQRRDLATKLVG---HVLPLSLQMYGCRVIQKALEVMELDQKIELV-RELDGNI 790
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG-A 326
+ +D NG++VIQ C++ E ++++ ++ GC V+Q +E+ G +
Sbjct: 791 MRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDS 850
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q + ++ EI+ +A +LA+D YGNYV QH+L ++ +L G V+ S NK+ SN
Sbjct: 851 QGQCIIDEILESACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASN 910
Query: 387 VVERCLLESGEEQSTRIIIELLR----SPNVSMLLMHPFGNYVIQSAL 430
V+E+C + +I E+++ + N+ ++ + NYV+Q L
Sbjct: 911 VIEKCFQHGDMTERDLLIREIVKQTEGNDNLLAMMKDQYANYVVQKIL 958
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 123/253 (48%), Gaps = 9/253 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G+++ L+ YGCR +Q+ + + ++ + E+ + + D GN+V+QK +E
Sbjct: 750 LVGHVLPLSLQMYGCRVIQKALEVMELDQKIELVRELDGNIMRCVRDQNGNHVIQKCIEC 809
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E I +++ Q+ + ++ +G R + ++LE+ Q ++ + A L
Sbjct: 810 VPTEH---IGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIIDEILESACVL 866
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YV Q+ ++ + +++++A ++ +K V++ C ++ +R+
Sbjct: 867 AQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNVIEKCFQHGDMTERDL 926
Query: 331 LVAEIIA------NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ EI+ N L + +D Y NYVVQ +L Q LL +++GH + YG
Sbjct: 927 LIREIVKQTEGNDNLLAMMKDQYANYVVQKILETCNEQQRELLLSRVKGHLQALRKYTYG 986
Query: 385 SNVVERCLLESGE 397
++V R GE
Sbjct: 987 KHIVSRVEQLCGE 999
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LE L + + + L+ + V + D +G IQ +++ + E+ + +EV +
Sbjct: 661 FLEELKSNRARRVELSDIAGHIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASS 720
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ QR L +++ + L L+ YG V+Q L +
Sbjct: 721 LMTDVFGNYVIQKFFEHGTPEQRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKI 780
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
L+R+L+G+ + ++ G++V+++C +E + ++ R V+ L MHP+G V
Sbjct: 781 ELVRELDGNIMRCVRDQNGNHVIQKC-IECVPTEHIGFVVSAFRG-QVASLSMHPYGCRV 838
Query: 426 IQSAL 430
IQ L
Sbjct: 839 IQRVL 843
>gi|348574638|ref|XP_003473097.1| PREDICTED: pumilio homolog 2 isoform 1 [Cavia porcellus]
Length = 1068
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 711 RSRLLEDFRNNRFPNLQLRDLLGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 770
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E + +Q+ L + T ++ + L +G R + K LE++
Sbjct: 771 AYQLMTDVFGNYVIQKFFEFGNLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 827
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 828 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 886
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 887 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 946
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 947 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 1006
Query: 426 IQSAL 430
+Q +
Sbjct: 1007 VQKMI 1011
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 803 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 861
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 862 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 916
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 917 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 976
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 977 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 1036
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1037 TYGKHILAK 1045
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 875 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 934
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 935 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 993
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 994 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1050
>gi|326328009|pdb|3Q0Q|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio2 In Complex With P38alpha Nrea
gi|326328011|pdb|3Q0R|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio2 In Complex With P38alpha Nreb
gi|326328013|pdb|3Q0S|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio2 In Complex With Erk2 Nre
Length = 351
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 166/306 (54%), Gaps = 13/306 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 2 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 61
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 62 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 118
Query: 251 TNPQQ-ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATD 309
++ QQ IS ++ L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 119 SSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTH 178
Query: 310 KSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLR 369
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++
Sbjct: 179 PYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVS 238
Query: 370 QLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLMHP--FGNY 424
++ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NY
Sbjct: 239 EIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANY 298
Query: 425 VIQSAL 430
V+Q +
Sbjct: 299 VVQKMI 304
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 136/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ I + E
Sbjct: 72 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKE 131
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 132 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQ 186
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+
Sbjct: 187 RILEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVL 245
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ A+R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 246 ALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMID 305
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 306 MAEPAQRKIIMHKIRPHITTLRKYTYGKHILAK 338
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + L+ YGCR +QR + E+ I E+ +L+
Sbjct: 162 QFIIDAF--------KGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ 213
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L L+ F +V C+ TH RA
Sbjct: 214 DQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALL 272
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +++ +RP TL K T G
Sbjct: 273 IDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYG 332
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 333 KHILAKLEKYY 343
>gi|195396057|ref|XP_002056649.1| GJ10105 [Drosophila virilis]
gi|194143358|gb|EDW59761.1| GJ10105 [Drosophila virilis]
Length = 812
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 154/289 (53%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK
Sbjct: 384 LRDLTNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFNEILGAAYSLMTDVFGNYVIQKF 443
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+ + + + QL L +G R + K LE+++ P+Q ++ L
Sbjct: 444 FEFGTPEQKNTLGMQVKGHVLQL---ALQMYGCRVIQKALESIS-PEQQQEIVHELDGHV 499
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++N Y ++T GC V+Q +E+ Q
Sbjct: 500 LKCVKDQNGNHVVQKCIECVDPVALQFVINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQ 559
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ ++ E+ + L +D YGNYV+QH+L + + L+ + G + S +K+ SNV
Sbjct: 560 TQPILDELHEHTENLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNV 619
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + T +I E+ + +++ + NYV+Q + VS+
Sbjct: 620 VEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSE 668
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 124/243 (51%), Gaps = 12/243 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +E
Sbjct: 459 VKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIE- 517
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + + L + F+ L+TH G R + ++LE+ T +Q +L L
Sbjct: 518 CVDP----VALQFVINAFKGQVYSLSTHPYGCRVIQRILEHCTA-EQTQPILDELHEHTE 572
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED L+N V ++ K V++ CV ++ +R
Sbjct: 573 NLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGER 632
Query: 329 ERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H + YG
Sbjct: 633 TGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYG 692
Query: 385 SNV 387
++
Sbjct: 693 KHI 695
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + + + NE+ Y
Sbjct: 369 RLLEDFRNQRYPNLQLRDLTNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFNEILGAAY 428
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q+ L ++ + L LA YG V+Q L P+
Sbjct: 429 SLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQ 488
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++ +L+GH + ++ G++VV++C +E + + + +I + V L HP+G
Sbjct: 489 QEIVHELDGHVLKCVKDQNGNHVVQKC-IECVDPVALQFVINAFKG-QVYSLSTHPYGCR 546
Query: 425 VIQSAL 430
VIQ L
Sbjct: 547 VIQRIL 552
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 60/130 (46%)
Query: 158 LAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRT 217
L +DQYG +Q + +E+ ++ V +V L F + VV+K V + +RT
Sbjct: 574 LIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERT 633
Query: 218 RILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGH 277
++ + + + + + V++ + +++ P Q+ ++ +RP L K T G
Sbjct: 634 GLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYGK 693
Query: 278 YVIQYCVKHF 287
++ K++
Sbjct: 694 HINAKLEKYY 703
>gi|268579547|ref|XP_002644756.1| C. briggsae CBR-PUF-9 protein [Caenorhabditis briggsae]
Length = 709
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 155/297 (52%), Gaps = 14/297 (4%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
+L+D+R N++ AKDQ+G R +Q+ + + +IF V++ ELM D FGNYV+QK
Sbjct: 339 TLQDIRANVIEYAKDQHGSRFIQQKLERASPRDKAVIFTPVLENAEELMTDVFGNYVIQK 398
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E + EQR ++ + + ++++ L +G R + K LE + Q +L +
Sbjct: 399 FFEFGNNEQRNLLVGTIRGN---VMKLALQMYGCRVIQKALEYVEEKYQHE-ILGEMEGQ 454
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV----ADNCYGIATDKSGCCVLQHCVEY 322
+ KD NG++VIQ ++ E +++++ +DN Y ++ GC V+Q +EY
Sbjct: 455 VLKCVKDQNGNHVIQKVIERVEPERLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLEY 514
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ-LEGHYVSFSCN 381
Q++ ++ + + L D YGNYV+QH++ +++ + + F+ +
Sbjct: 515 CSDDQKQPVLDALHIHLKQLVLDQYGNYVIQHVIEHGSASDKEKIVQDVISDDLLKFAQH 574
Query: 382 KYGSNVVERCLLESGEEQSTRIIIELLRSPN-----VSMLLMHPFGNYVIQSALLVS 433
K+ SNV+E+CL G + II ++ PN + ++ PF NYV+Q L V+
Sbjct: 575 KFASNVIEKCLTYGGHAERNLIIDKVCGDPNDPSPPLLQMMKDPFANYVVQKMLDVA 631
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 126/246 (51%), Gaps = 10/246 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RGN++ LA YGCR +Q+ + + ++ I E+ +V + + D GN+V+QK++E
Sbjct: 415 IRGNVMKLALQMYGCRVIQKALEYVEEKYQHEILGEMEGQVLKCVKDQNGNHVIQKVIER 474
Query: 211 CSEEQRTRILLMLT-NDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
E+ I+ T N+ + + ++ +G R + ++LE ++ Q+ VL AL
Sbjct: 475 VEPERLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLEYCSDDQK-QPVLDALHIHLKQ 533
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEV-ADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L D G+YVIQ+ ++H S D + ++ +V +D+ A K V++ C+ Y A+R
Sbjct: 534 LVLDQYGNYVIQHVIEHGSASDKEKIVQDVISDDLLKFAQHKFASNVIEKCLTYGGHAER 593
Query: 329 ERLVAEIIANA-------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
++ ++ + L + +D + NYVVQ +L + PQ + ++ H +
Sbjct: 594 NLIIDKVCGDPNDPSPPLLQMMKDPFANYVVQKMLDVADPQHRKKITLTIKPHIATLRKY 653
Query: 382 KYGSNV 387
+G ++
Sbjct: 654 NFGKHI 659
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 4/182 (2%)
Query: 252 NPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKS 311
+P L +R + KD +G IQ ++ S D + V +N + TD
Sbjct: 332 DPNGAPRTLQDIRANVIEYAKDQHGSRFIQQKLERASPRDKAVIFTPVLENAEELMTDVF 391
Query: 312 GCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQL 371
G V+Q E+ QR LV I N + LA YG V+Q L + +L ++
Sbjct: 392 GNYVIQKFFEFGNNEQRNLLVGTIRGNVMKLALQMYGCRVIQKALEYVEEKYQHEILGEM 451
Query: 372 EGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLMHPFGNYVIQS 428
EG + ++ G++V+++ ++E E + + II+ S NV L +HP+G VIQ
Sbjct: 452 EGQVLKCVKDQNGNHVIQK-VIERVEPERLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQR 510
Query: 429 AL 430
L
Sbjct: 511 VL 512
>gi|194744548|ref|XP_001954755.1| GF18428 [Drosophila ananassae]
gi|190627792|gb|EDV43316.1| GF18428 [Drosophila ananassae]
Length = 896
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 153/289 (52%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK
Sbjct: 449 LRDLVNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKF 508
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+ + + + QL L +G R + K LE+++ P+Q ++ L
Sbjct: 509 FEFGTPEQKNTLGMQVKGHVLQL---ALQMYGCRVIQKALESIS-PEQQQEIVHELDGHV 564
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++N Y ++T GC V+Q +E+ Q
Sbjct: 565 LKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQ 624
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L + + L+ + G + S +K+ SNV
Sbjct: 625 TTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNV 684
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + T +I E+ + +++ + NYV+Q + VS+
Sbjct: 685 VEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSE 733
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 125/243 (51%), Gaps = 12/243 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +E
Sbjct: 524 VKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIE- 582
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + + L + F+ L+TH G R + ++LE+ T +Q + +L L
Sbjct: 583 CVDP----VALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTA-EQTTPILDELHEHTE 637
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED L+N V ++ K V++ CV ++ +R
Sbjct: 638 QLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGER 697
Query: 329 ERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H + YG
Sbjct: 698 TGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYG 757
Query: 385 SNV 387
++
Sbjct: 758 KHI 760
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + + + +E+ Y
Sbjct: 434 RLLEDFRNQRYPNLQLRDLVNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAY 493
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q+ L ++ + L LA YG V+Q L P+
Sbjct: 494 SLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQ 553
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++ +L+GH + ++ G++VV++C +E + + + II + V L HP+G
Sbjct: 554 QEIVHELDGHVLKCVKDQNGNHVVQKC-IECVDPVALQFIINAFKG-QVYSLSTHPYGCR 611
Query: 425 VIQSAL 430
VIQ L
Sbjct: 612 VIQRIL 617
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 64/140 (45%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +L + L +DQYG +Q + +E+ ++ V +V L F + VV+K
Sbjct: 629 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 688
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + +RT ++ + + + + + V++ + +++ P Q+ ++ +RP
Sbjct: 689 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHM 748
Query: 268 VTLTKDTNGHYVIQYCVKHF 287
L K T G ++ K++
Sbjct: 749 AALRKYTYGKHINAKLEKYY 768
>gi|302759032|ref|XP_002962939.1| hypothetical protein SELMODRAFT_1983 [Selaginella moellendorffii]
gi|300169800|gb|EFJ36402.1| hypothetical protein SELMODRAFT_1983 [Selaginella moellendorffii]
Length = 337
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 154/288 (53%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G++V + DQ+G R +Q+ + + EE M+F EV+ + LM D FGNYV+QK
Sbjct: 17 LSDIVGHVVEFSADQHGSRFIQQKLEAATAEEKAMVFDEVLPQAFTLMTDVFGNYVIQKF 76
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + +QR + +L ++ + L +G R + K LE QQ LV+ L
Sbjct: 77 FEHGNSQQRRELANLLVG---HMLELSLQMYGCRVIQKALEVCDVDQQTQLVV-ELDGHV 132
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ C++ + +++++ ++T GC V+Q +E+ Q
Sbjct: 133 MRCVRDQNGNHVIQKCIECVPPDKIQFIISAFYGQVLVLSTHPYGCRVIQRVLEHCTDDQ 192
Query: 328 RER-LVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
++ ++ EI+ LA+D YGNYV+QH+L P + ++ +L G V S +K+ SN
Sbjct: 193 KQAGIMEEILGATCSLAQDQYGNYVIQHVLEHGKPHERSEIITKLAGQIVQMSQHKFASN 252
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL G + ++ E+L + + + ++ F NYV+Q L
Sbjct: 253 VVEKCLEFGGPAERQILVDEMLGTTDENAPLQAMMKDQFANYVVQKVL 300
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 2/185 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE + + L+ + V + D +G IQ ++ + E+ + +EV +
Sbjct: 3 LLEEFKSSKSRRFELSDIVGHVVEFSADQHGSRFIQQKLEAATAEEKAMVFDEVLPQAFT 62
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ QR L ++ + L L+ YG V+Q L +
Sbjct: 63 LMTDVFGNYVIQKFFEHGNSQQRRELANLLVGHMLELSLQMYGCRVIQKALEVCDVDQQT 122
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
L+ +L+GH + ++ G++V+++C +E + II V +L HP+G V
Sbjct: 123 QLVVELDGHVMRCVRDQNGNHVIQKC-IECVPPDKIQFIISAFYG-QVLVLSTHPYGCRV 180
Query: 426 IQSAL 430
IQ L
Sbjct: 181 IQRVL 185
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ + E +++ E++ E +M D F N
Sbjct: 234 ITKLAGQIVQMSQHKFASNVVEKCLEFGGPAERQILVDEMLGTTDENAPLQAMMKDQFAN 293
Query: 202 YVVQKLVELCSEEQRTRIL 220
YVVQK++E CS++QR +L
Sbjct: 294 YVVQKVLETCSDQQREMLL 312
>gi|57834079|emb|CAE02858.2| OSJNBa0014F04.24 [Oryza sativa Japonica Group]
Length = 623
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 147/272 (54%), Gaps = 6/272 (2%)
Query: 161 DQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRIL 220
DQ+G R +Q+ + ++ E IF E++ L D FGNYV+QK E +E Q +++
Sbjct: 287 DQFGSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFATESQLSQLA 346
Query: 221 LMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVI 280
L +++ +G R V K+++ + ++IS+V L+ + D NG++VI
Sbjct: 347 DQLRG---HFLQLSFQMYGCRVVQKVIDVVDLERKISIV-GELKNSVLRCISDQNGNHVI 402
Query: 281 QYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG-AQRERLVAEIIANA 339
Q C++ + +++ ++ Y + T + GC V+Q +E+ A + ++ EI+ A
Sbjct: 403 QKCIECVPEDHIPFVIEDILQKIYPLCTHQYGCRVIQRVLEHCHNPATQSAVMDEIVERA 462
Query: 340 LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQ 399
L ED +GNYVVQH+L P+ +S++++L G V+ S KY SNVVE+CL ++
Sbjct: 463 FDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEKCLSFGTPDE 522
Query: 400 STRIIIELLRSPNVSMLLMHP-FGNYVIQSAL 430
+I E++ S LM FGNYV+Q L
Sbjct: 523 REGLIREIVSSGQTFQGLMKDQFGNYVVQRIL 554
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 132/258 (51%), Gaps = 9/258 (3%)
Query: 146 SSLRD-LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
S L D LRG+ + L+ YGCR +Q+ + + E I E+ + V + D GN+V+
Sbjct: 343 SQLADQLRGHFLQLSFQMYGCRVVQKVIDVVDLERKISIVGELKNSVLRCISDQNGNHVI 402
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK +E E+ I ++ + ++ +C + +G R + ++LE+ NP S V+ +
Sbjct: 403 QKCIECVPEDH---IPFVIEDILQKIYPLCTHQYGCRVIQRVLEHCHNPATQSAVMDEIV 459
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
A LT+D G+YV+Q+ ++H E+ ++ +++ ++ K V++ C+ +
Sbjct: 460 ERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEKCLSFGT 519
Query: 325 GAQRERLVAEIIANALL---LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
+RE L+ EI+++ L +D +GNYVVQ +L + +L ++ H
Sbjct: 520 PDEREGLIREIVSSGQTFQGLMKDQFGNYVVQRILQTCDDKFLVVILSSIKMHLNELKNY 579
Query: 382 KYGSNVVERC--LLESGE 397
+G ++V R L+ +GE
Sbjct: 580 TFGKHIVARVEKLIITGE 597
>gi|390598145|gb|EIN07544.1| hypothetical protein PUNSTDRAFT_53691 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 570
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 158/307 (51%), Gaps = 24/307 (7%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI--DRVCELMIDPFGNYVVQ 205
L D+ G++ DQ+G R +Q+ + EE E +F E++ +L D FGNYVVQ
Sbjct: 234 LADIAGHVAEFGGDQHGSRFIQQKLEGASAEEREAVFAEIVPGGHALQLTQDVFGNYVVQ 293
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+E CS QR I L++ ++ + L +G R V K LE L Q V L P
Sbjct: 294 KLLEHCSPAQRVAIAECLSD---HVLALSLQMYGCRVVQKALEYLPESHQAKFVRE-LEP 349
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
+ KD NG++VIQ ++ + ++ N + + +A+ GC VLQ C+EY
Sbjct: 350 HVIRCVKDANGNHVIQKIIERVNPSLLTFV-NGFQSHVFELASHPYGCRVLQRCLEYLSP 408
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
Q L+AE+ + L +D +GNYV+Q +L PQ A ++++L G + + +K+ S
Sbjct: 409 EQTRGLLAELHECTIQLMQDQFGNYVIQFVLEHGAPQDRAEVVQKLRGQMLPMARHKFAS 468
Query: 386 NVVERCLLESGEEQSTRIIIELL------RSPNVSMLLMHPFGNYVIQSAL--------- 430
NV E+ L+ + + +I E+L SP V+M + + NYV+Q A+
Sbjct: 469 NVCEKALVTAEPDSRRALIDEILAQGADGSSPIVTM-MKDQYANYVLQRAVSTAEPDQQE 527
Query: 431 -LVSKVR 436
L+S++R
Sbjct: 528 TLISRIR 534
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEII--ANALLLAEDCYGNY 350
K+ L ++A + D+ G +Q +E + +RE + AEI+ +AL L +D +GNY
Sbjct: 231 KWELADIAGHVAEFGGDQHGSRFIQQKLEGASAEEREAVFAEIVPGGHALQLTQDVFGNY 290
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
VVQ LL P ++ L H ++ S YG VV++ L E + + EL
Sbjct: 291 VVQKLLEHCSPAQRVAIAECLSDHVLALSLQMYGCRVVQKALEYLPESHQAKFVREL--E 348
Query: 411 PNVSMLLMHPFGNYVIQ 427
P+V + GN+VIQ
Sbjct: 349 PHVIRCVKDANGNHVIQ 365
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 80/204 (39%), Gaps = 38/204 (18%)
Query: 134 KRNQWLQDSFDCSSLRDLRGNIVALAKDQ------------------------------- 162
K ++L +S +R+L +++ KD
Sbjct: 330 KALEYLPESHQAKFVRELEPHVIRCVKDANGNHVIQKIIERVNPSLLTFVNGFQSHVFEL 389
Query: 163 ----YGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTR 218
YGCR LQR + L E+ + E+ + +LM D FGNYV+Q ++E + + R
Sbjct: 390 ASHPYGCRVLQRCLEYLSPEQTRGLLAELHECTIQLMQDQFGNYVIQFVLEHGAPQDRAE 449
Query: 219 ILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA---VTLTKDTN 275
++ L + R ++ L E + I +LA G+ VT+ KD
Sbjct: 450 VVQKLRGQMLPMARHKFASNVCEKALVTAEPDSRRALIDEILAQGADGSSPIVTMMKDQY 509
Query: 276 GHYVIQYCVKHFSHEDTKYLLNEV 299
+YV+Q V + + L++ +
Sbjct: 510 ANYVLQRAVSTAEPDQQETLISRI 533
>gi|348574640|ref|XP_003473098.1| PREDICTED: pumilio homolog 2 isoform 2 [Cavia porcellus]
Length = 989
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 632 RSRLLEDFRNNRFPNLQLRDLLGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 691
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E + +Q+ L + T ++ + L +G R + K LE++
Sbjct: 692 AYQLMTDVFGNYVIQKFFEFGNLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 748
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 749 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 807
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 808 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 867
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 868 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 927
Query: 426 IQSAL 430
+Q +
Sbjct: 928 VQKMI 932
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 724 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 782
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 783 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 837
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 838 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 897
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 898 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 957
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 958 TYGKHILAK 966
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 796 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 855
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 856 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 914
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 915 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 971
>gi|195330502|ref|XP_002031942.1| GM26283 [Drosophila sechellia]
gi|194120885|gb|EDW42928.1| GM26283 [Drosophila sechellia]
Length = 873
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 153/289 (52%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK
Sbjct: 449 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 508
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+ + + + QL L +G R + K LE+++ P+Q ++ L
Sbjct: 509 FEFGTPEQKNTLGMQVKGHVLQL---ALQMYGCRVIQKALESIS-PEQQQEIVHELDGHV 564
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++N Y ++T GC V+Q +E+ Q
Sbjct: 565 LKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQ 624
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L + + L+ + G + S +K+ SNV
Sbjct: 625 TTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNV 684
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + T +I E+ + +++ + NYV+Q + VS+
Sbjct: 685 VEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSE 733
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 125/243 (51%), Gaps = 12/243 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +E
Sbjct: 524 VKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIE- 582
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + + L + F+ L+TH G R + ++LE+ T +Q + +L L
Sbjct: 583 CVDP----VALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTA-EQTTPILDELHEHTE 637
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED L+N V ++ K V++ CV ++ +R
Sbjct: 638 QLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGER 697
Query: 329 ERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H + YG
Sbjct: 698 TGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYG 757
Query: 385 SNV 387
++
Sbjct: 758 KHI 760
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + + + +E+ Y
Sbjct: 434 RLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAY 493
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q+ L ++ + L LA YG V+Q L P+
Sbjct: 494 SLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQ 553
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++ +L+GH + ++ G++VV++C +E + + + II + V L HP+G
Sbjct: 554 QEIVHELDGHVLKCVKDQNGNHVVQKC-IECVDPVALQFIINAFKG-QVYSLSTHPYGCR 611
Query: 425 VIQSAL 430
VIQ L
Sbjct: 612 VIQRIL 617
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 64/140 (45%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +L + L +DQYG +Q + +E+ ++ V +V L F + VV+K
Sbjct: 629 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 688
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + +RT ++ + + + + + V++ + +++ P Q+ ++ +RP
Sbjct: 689 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHM 748
Query: 268 VTLTKDTNGHYVIQYCVKHF 287
L K T G ++ K++
Sbjct: 749 AALRKYTYGKHINAKLEKYY 768
>gi|393245475|gb|EJD52985.1| ARM repeat-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 503
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 156/293 (53%), Gaps = 13/293 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI-DRVCELMIDPFGNYVVQK 206
LRD+ G IV + DQ+G R +Q+ + S EE +++F E++ + +L+ D FGNYV+QK
Sbjct: 35 LRDIFGYIVEFSGDQHGSRFIQQKLESATSEEKQIVFDEIVPESALQLIQDVFGNYVIQK 94
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L E ++ Q+T + + N QL L +G R V K +E + QQ S V L
Sbjct: 95 LFEYGTQVQKTALANTMENHILQL---SLQMYGCRVVQKAIEYILPEQQASFV-KELEAH 150
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ + D NG++VIQ ++ S E ++ + + Y ++T GC VLQ C EY
Sbjct: 151 VLKIVMDANGNHVIQKLIERVSPERLGFV-HSFRGSVYELSTHPFGCRVLQRCFEYLTDD 209
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q L+ E+ L +D +GNYVVQ +L P+ ++ +L G + + +K+ SN
Sbjct: 210 QTRPLLDELHKYTSNLMQDQFGNYVVQFVLEHGKPEDRLLIISRLRGQMLHMAKHKFASN 269
Query: 387 VVERCLLESGEEQSTRIIIELLR------SPNVSMLLMHPFGNYVIQSALLVS 433
V E+ L+ + EE +I E++ SP V+M + F NYV+Q AL V+
Sbjct: 270 VCEKALITADEENQRLLIDEIMTPRADGFSPVVTM-MKDQFANYVLQRALSVA 321
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 9/155 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ RG++ L+ +GCR LQR L ++ + E+ LM D FGNYVVQ +
Sbjct: 179 VHSFRGSVYELSTHPFGCRVLQRCFEYLTDDQTRPLLDELHKYTSNLMQDQFGNYVVQFV 238
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E E R LL+++ Q++ + + K L Q L+ + P A
Sbjct: 239 LEHGKPEDR---LLIISRLRGQMLHMAKHKFASNVCEKALITADEENQRLLIDEIMTPRA 295
Query: 268 ------VTLTKDTNGHYVIQYCVKHFSHEDTKYLL 296
VT+ KD +YV+Q + + E K L+
Sbjct: 296 DGFSPVVTMMKDQFANYVLQRALSVATGEQKKQLV 330
>gi|320584088|gb|EFW98300.1| hypothetical protein HPODL_0192 [Ogataea parapolymorpha DL-1]
Length = 959
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 162/313 (51%), Gaps = 25/313 (7%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
+L+D+ G+ AKDQ+G R +Q+ ++ + E+IF E+ + +LM D FGNYV+QK
Sbjct: 425 TLKDIYGHGYEFAKDQHGSRFIQQQLALSNDRDKEVIFNEIRNHAMDLMTDVFGNYVIQK 484
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E ++ QR + + + L L +G R V K LE L +Q+ +L LR
Sbjct: 485 YFEHGNDVQRKVMFESMRGSFYDL---SLQMYGCRVVQKGLEALQLEEQLQ-ILDELREN 540
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ L KD NG++VIQ ++ ++L+ + Y ++T GC V+Q +E+S
Sbjct: 541 ILLLVKDQNGNHVIQKSIECIPIAKIPFILDSIKHQIYHLSTHPYGCRVIQRLLEFSDQT 600
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
++ ++ E+ L +D +GNYV+QH++ + T +L+ + + V S +K+ SN
Sbjct: 601 DQQFILDELKDYVYYLIQDQFGNYVIQHVVEHGSVKYTDEILQVVLENLVELSKHKFASN 660
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPN--------VSMLLMHPFGNYVIQ-------- 427
VE+C++ EE +I E++R P+ + +++ PF NYV+Q
Sbjct: 661 AVEKCIIHQTEENRGKIYKEIMRDNMDPHGKLDENSCLCLMMKDPFANYVVQKLVELIDD 720
Query: 428 --SALLVSKVRLF 438
LLV K+R +
Sbjct: 721 EKKGLLVKKIRDY 733
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 48/233 (20%)
Query: 235 LNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKY 294
+ H +R+ LLE N + L + KD +G IQ + + D +
Sbjct: 403 MKKHIVRS--PLLEEFRNNKNKEYTLKDIYGHGYEFAKDQHGSRFIQQQLALSNDRDKEV 460
Query: 295 LLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE------------------------- 329
+ NE+ ++ + TD G V+Q E+ QR+
Sbjct: 461 IFNEIRNHAMDLMTDVFGNYVIQKYFEHGNDVQRKVMFESMRGSFYDLSLQMYGCRVVQK 520
Query: 330 -----------RLVAEIIANALLLAEDCYGNYVVQHLLA----LRVPQITASLLRQLEGH 374
+++ E+ N LLL +D GN+V+Q + ++P I S+ Q+
Sbjct: 521 GLEALQLEEQLQILDELRENILLLVKDQNGNHVIQKSIECIPIAKIPFILDSIKHQI--- 577
Query: 375 YVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQ 427
S + YG V++R LLE ++ + I++ L+ V L+ FGNYVIQ
Sbjct: 578 -YHLSTHPYGCRVIQR-LLEFSDQTDQQFILDELKD-YVYYLIQDQFGNYVIQ 627
>gi|341874392|gb|EGT30327.1| CBN-PUF-9 protein [Caenorhabditis brenneri]
Length = 688
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 177/356 (49%), Gaps = 24/356 (6%)
Query: 108 NFDGLRSNGNELSSVPRNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRH 167
NF G+ N N L P N + + +R + +L D+R N++ AKDQ+G R
Sbjct: 293 NFGGMPPNQNGL---PPN-FSQNPPRRRGPEDPNGQSPRTLLDIRNNVIEFAKDQHGSRF 348
Query: 168 LQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDD 227
+Q+ + + IF V++ ELM D FGNYV+QK E + +QR +++ + +
Sbjct: 349 IQQKLERASSRDKAAIFTPVLEHAEELMTDVFGNYVIQKFFEYGNNDQRNQLVATIRGN- 407
Query: 228 FQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
++++ L +G R + K LE + Q +L + + KD NG++VIQ ++
Sbjct: 408 --VMKLALQMYGCRVIQKALEYVEEKYQHE-ILGEMEGQVLKCVKDQNGNHVIQKVIERV 464
Query: 288 SHEDTKYLLNEV----ADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLA 343
+ +++++ +DN Y ++ GC V+Q +EY Q++ ++ + + L
Sbjct: 465 EPDRLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLEYCNDEQKQPVLDALNLHLKQLV 524
Query: 344 EDCYGNYVVQHLLALRVPQITASLLRQ-LEGHYVSFSCNKYGSNVVERCLLESGEEQSTR 402
D YGNYV+QH++ + +++ + + F+ +K+ SNV+E+CL +E
Sbjct: 525 LDQYGNYVIQHVIEHGSAKDKEQIVKDVINDDLLKFAQHKFASNVIEKCLSFGSQEDRNL 584
Query: 403 IIIELLRSPNVS-----MLLMHPFGNYVIQSALLVS------KVRLFSSPPISVCK 447
II ++ PN + +++ PF NYV+Q L V+ K+ L P I+ +
Sbjct: 585 IIDKVCGDPNDASPPLLLMMKDPFANYVVQKMLDVADPQHRKKITLTIKPHIATLR 640
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 127/251 (50%), Gaps = 10/251 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RGN++ LA YGCR +Q+ + + ++ I E+ +V + + D GN+V+QK++E
Sbjct: 404 IRGNVMKLALQMYGCRVIQKALEYVEEKYQHEILGEMEGQVLKCVKDQNGNHVIQKVIER 463
Query: 211 CSEEQRTRILLMLT-NDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
++ I+ T N+ + + ++ +G R + ++LE N +Q VL AL
Sbjct: 464 VEPDRLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLE-YCNDEQKQPVLDALNLHLKQ 522
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVA-DNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L D G+YVIQ+ ++H S +D + ++ +V D+ A K V++ C+ + R
Sbjct: 523 LVLDQYGNYVIQHVIEHGSAKDKEQIVKDVINDDLLKFAQHKFASNVIEKCLSFGSQEDR 582
Query: 329 ERLVAEIIANA-------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
++ ++ + LL+ +D + NYVVQ +L + PQ + ++ H +
Sbjct: 583 NLIIDKVCGDPNDASPPLLLMMKDPFANYVVQKMLDVADPQHRKKITLTIKPHIATLRKY 642
Query: 382 KYGSNVVERCL 392
+G +++ + +
Sbjct: 643 NFGKHILRKYI 653
>gi|168030336|ref|XP_001767679.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680999|gb|EDQ67430.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1134
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 158/306 (51%), Gaps = 14/306 (4%)
Query: 135 RNQWLQDSFDCSSLR-----DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVID 189
R L + F S R D+ G++V + DQ+G R +Q+ + + E+ M F E++
Sbjct: 777 RGSTLLEEFKNSKTRRFELSDIAGHVVEFSADQHGSRFIQQKLETATPEDKNMGFQEIVP 836
Query: 190 RVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLEN 249
R LM D FGNYV+QK E +++QR + L ++ + L +G R + K LE
Sbjct: 837 RAITLMSDVFGNYVIQKFFEHGTQQQRRELASQLVG---HVLVLSLQMYGCRVIQKALEV 893
Query: 250 LTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATD 309
+ QQ LV + L + +D NG++VIQ C++ ++++ + ++T
Sbjct: 894 VDVDQQTQLV-SELDGHVMRCVRDQNGNHVIQKCIECVPPAKIHFIISAFYNQVVTLSTH 952
Query: 310 KSGCCVLQHCVEYSKGAQRER-LVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLL 368
GC V+Q +E+ Q+++ ++ EI+ + LA+D YGNYVVQH+L + ++
Sbjct: 953 PYGCRVIQRVLEHCTDEQKQKGIMEEILRSTCTLAQDQYGNYVVQHVLEHGRDHERSDII 1012
Query: 369 RQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNY 424
+L G V S +K+ SNVVE+CL G + ++ E+L + + ++ F NY
Sbjct: 1013 TKLAGQIVQMSQHKFASNVVEKCLEYGGPAERQILVDEMLGHTDENEPLQAMMKDQFANY 1072
Query: 425 VIQSAL 430
V+Q L
Sbjct: 1073 VVQKVL 1078
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 14/243 (5%)
Query: 199 FGNYVVQKLVELCSEEQRTRILLMLTNDD---FQL-------VRICLNTHGIRAVLKLLE 248
+ + VQK E E + + +L N F+L V + HG R + + LE
Sbjct: 761 YPGWQVQKTGETTEETRGSTLLEEFKNSKTRRFELSDIAGHVVEFSADQHGSRFIQQKLE 820
Query: 249 NLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIAT 308
T P+ ++ + P A+TL D G+YVIQ +H + + + L +++ + ++
Sbjct: 821 TAT-PEDKNMGFQEIVPRAITLMSDVFGNYVIQKFFEHGTQQQRRELASQLVGHVLVLSL 879
Query: 309 DKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLL 368
GC V+Q +E Q+ +LV+E+ + + D GN+V+Q + P ++
Sbjct: 880 QMYGCRVIQKALEVVDVDQQTQLVSELDGHVMRCVRDQNGNHVIQKCIECVPPAKIHFII 939
Query: 369 RQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIII-ELLRSPNVSMLLMHPFGNYVIQ 427
V+ S + YG V++R L +EQ + I+ E+LRS L +GNYV+Q
Sbjct: 940 SAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQKQKGIMEEILRS--TCTLAQDQYGNYVVQ 997
Query: 428 SAL 430
L
Sbjct: 998 HVL 1000
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ + E +++ E++ E +M D F N
Sbjct: 1012 ITKLAGQIVQMSQHKFASNVVEKCLEYGGPAERQILVDEMLGHTDENEPLQAMMKDQFAN 1071
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C E QR +L + L + H + V KL+
Sbjct: 1072 YVVQKVLETCDESQRELLLGRIRVHLHALKKYTYGKHIVARVEKLV 1117
>gi|384484809|gb|EIE76989.1| hypothetical protein RO3G_01693 [Rhizopus delemar RA 99-880]
Length = 747
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 146/264 (55%), Gaps = 5/264 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+IV + DQ+G R +Q+ + + +E +M+F EV+ +LM D FGNYV+QK
Sbjct: 485 LKDIDGHIVEFSGDQHGSRFIQQKLETANSDEKQMVFEEVLPNALQLMTDVFGNYVLQKF 544
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+T ++ + ++ + L +G R V K LE++ QQ LV L
Sbjct: 545 FEHGNQMQKT---ILAKQMEGHVLSLSLQMYGCRVVQKALEHVLTEQQAKLV-KELDGCV 600
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ ++ + +++++ Y +AT GC V+Q E+ Q
Sbjct: 601 LKCIKDQNGNHVIQKAIERVPAQHIQFIIDAFHGQVYNLATHPYGCRVIQRMFEHCTEDQ 660
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
L+ E+ L +D YGNYV+QH+L P + ++ ++ GH + S +K+ SNV
Sbjct: 661 TGPLLDELHRCTSQLVQDQYGNYVIQHILERGRPADKSLVIEKIRGHVLQLSKHKFASNV 720
Query: 388 VERCLLESGEEQSTRIIIELLRSP 411
VE+C ++ G ++ +++IE + P
Sbjct: 721 VEKC-VDFGSKRDRQLLIEEVLQP 743
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 15/225 (6%)
Query: 223 LTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQY 282
L + D +V + HG R + + LE N + +V + P A+ L D G+YV+Q
Sbjct: 485 LKDIDGHIVEFSGDQHGSRFIQQKLET-ANSDEKQMVFEEVLPNALQLMTDVFGNYVLQK 543
Query: 283 CVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLL 342
+H + L ++ + ++ GC V+Q +E+ Q+ +LV E+ L
Sbjct: 544 FFEHGNQMQKTILAKQMEGHVLSLSLQMYGCRVVQKALEHVLTEQQAKLVKELDGCVLKC 603
Query: 343 AEDCYGNYVVQHLLALRVP-QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQST 401
+D GN+V+Q + RVP Q ++ G + + + YG V++R E+Q+
Sbjct: 604 IKDQNGNHVIQKAIE-RVPAQHIQFIIDAFHGQVYNLATHPYGCRVIQRMFEHCTEDQTG 662
Query: 402 RIIIELLRSPNVSMLLMHPFGNYVIQ----------SALLVSKVR 436
++ EL R S L+ +GNYVIQ +L++ K+R
Sbjct: 663 PLLDELHRC--TSQLVQDQYGNYVIQHILERGRPADKSLVIEKIR 705
>gi|195111827|ref|XP_002000478.1| GI22503 [Drosophila mojavensis]
gi|193917072|gb|EDW15939.1| GI22503 [Drosophila mojavensis]
Length = 871
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 153/289 (52%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK
Sbjct: 420 LRDLSNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFNEILGAAYSLMTDVFGNYVIQKF 479
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+ + + + QL L +G R + K LE+++ P+Q ++ L
Sbjct: 480 FEFGTPEQKNTLGMQVKGHVLQL---ALQMYGCRVIQKALESIS-PEQQQEIVHELDGHV 535
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++N Y ++T GC V+Q +E+ Q
Sbjct: 536 LKCVKDQNGNHVVQKCIECVDPAALQFVINAFKGQVYSLSTHPYGCRVIQRILEHCTPEQ 595
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L + + L+ + G + S +K+ SNV
Sbjct: 596 TTPILDELHEHTENLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNV 655
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + T +I E+ + +++ + NYV+Q + VS+
Sbjct: 656 VEKCVTHATRSERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSE 704
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 128/243 (52%), Gaps = 12/243 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +E
Sbjct: 495 VKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIE- 553
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + + ++ + F+ L+TH G R + ++LE+ T P+Q + +L L
Sbjct: 554 CVDPAALQFVI----NAFKGQVYSLSTHPYGCRVIQRILEHCT-PEQTTPILDELHEHTE 608
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED L+N V ++ K V++ CV ++ ++R
Sbjct: 609 NLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRSER 668
Query: 329 ERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H + YG
Sbjct: 669 TGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMTALRKYTYG 728
Query: 385 SNV 387
++
Sbjct: 729 KHI 731
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + + + NE+ Y
Sbjct: 405 RLLEDFRNQRYPNLQLRDLSNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFNEILGAAY 464
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q+ L ++ + L LA YG V+Q L P+
Sbjct: 465 SLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQ 524
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++ +L+GH + ++ G++VV++C +E + + + +I + V L HP+G
Sbjct: 525 QEIVHELDGHVLKCVKDQNGNHVVQKC-IECVDPAALQFVINAFKG-QVYSLSTHPYGCR 582
Query: 425 VIQSAL 430
VIQ L
Sbjct: 583 VIQRIL 588
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 60/130 (46%)
Query: 158 LAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRT 217
L +DQYG +Q + +E+ ++ V +V L F + VV+K V + +RT
Sbjct: 610 LIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRSERT 669
Query: 218 RILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGH 277
++ + + + + + V++ + +++ P Q+ ++ +RP L K T G
Sbjct: 670 GLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMTALRKYTYGK 729
Query: 278 YVIQYCVKHF 287
++ K++
Sbjct: 730 HINAKLEKYY 739
>gi|357445829|ref|XP_003593192.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355482240|gb|AES63443.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 198
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 91/138 (65%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
K++ A +C IAT + GCCVL C+ YS G R+RLVAEI ANALLLA+D YGNYVV
Sbjct: 22 KFIFVAAARHCIDIATHQHGCCVLPKCIRYSSGEHRQRLVAEISANALLLAQDKYGNYVV 81
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q++L R+P +L RQ EG+YV S K+ S VVE+CL+ +E +II ELL P+
Sbjct: 82 QYVLDFRIPSAATTLTRQFEGNYVHMSMQKFSSRVVEKCLVVFNDENRAKIIHELLSDPH 141
Query: 413 VSMLLMHPFGNYVIQSAL 430
+LL P NYVIQ AL
Sbjct: 142 FDLLLQDPHANYVIQKAL 159
>gi|28573153|ref|NP_788604.1| pumilio, isoform E [Drosophila melanogaster]
gi|25013093|gb|AAN71644.1| SD07661p [Drosophila melanogaster]
gi|28381200|gb|AAO41523.1| pumilio, isoform E [Drosophila melanogaster]
Length = 935
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 153/289 (52%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK
Sbjct: 511 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 570
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+ + + + QL L +G R + K LE+++ P+Q ++ L
Sbjct: 571 FEFGTPEQKNTLGMQVKGHVLQL---ALQMYGCRVIQKALESIS-PEQQQEIVHELDGHV 626
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++N Y ++T GC V+Q +E+ Q
Sbjct: 627 LKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQ 686
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L + + L+ + G + S +K+ SNV
Sbjct: 687 TTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNV 746
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + T +I E+ + +++ + NYV+Q + VS+
Sbjct: 747 VEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSE 795
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 125/244 (51%), Gaps = 12/244 (4%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
++G+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +E
Sbjct: 585 QVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIE 644
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGA 267
C + + L + F+ L+TH G R + ++LE+ T +Q + +L L
Sbjct: 645 -CVDP----VALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTA-EQTTPILDELHEHT 698
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
L +D G+YVIQ+ ++H ED L+N V ++ K V++ CV ++ +
Sbjct: 699 EQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGE 758
Query: 328 RERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
R L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H + Y
Sbjct: 759 RTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTY 818
Query: 384 GSNV 387
G ++
Sbjct: 819 GKHI 822
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + + + +E+ Y
Sbjct: 496 RLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAY 555
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q+ L ++ + L LA YG V+Q L P+
Sbjct: 556 SLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQ 615
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++ +L+GH + ++ G++VV++C +E + + + II + V L HP+G
Sbjct: 616 QEIVHELDGHVLKCVKDQNGNHVVQKC-IECVDPVALQFIINAFKG-QVYSLSTHPYGCR 673
Query: 425 VIQSAL 430
VIQ L
Sbjct: 674 VIQRIL 679
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 64/140 (45%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +L + L +DQYG +Q + +E+ ++ V +V L F + VV+K
Sbjct: 691 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 750
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + +RT ++ + + + + + V++ + +++ P Q+ ++ +RP
Sbjct: 751 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHM 810
Query: 268 VTLTKDTNGHYVIQYCVKHF 287
L K T G ++ K++
Sbjct: 811 AALRKYTYGKHINAKLEKYY 830
>gi|237649087|ref|NP_001153694.1| pumilio homolog 2 isoform 3 [Mus musculus]
gi|27692665|gb|AAH41773.1| Pum2 protein [Mus musculus]
Length = 985
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +++F E++
Sbjct: 628 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQA 687
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 688 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 744
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 745 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 803
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 804 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 863
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 864 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 923
Query: 426 IQSAL 430
+Q +
Sbjct: 924 VQKMI 928
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 720 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 778
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 779 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 833
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 834 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 893
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 894 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 953
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 954 TYGKHILAK 962
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 792 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 851
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 852 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 910
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 911 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 967
>gi|386765393|ref|NP_001247002.1| pumilio, isoform F [Drosophila melanogaster]
gi|383292588|gb|AFH06320.1| pumilio, isoform F [Drosophila melanogaster]
Length = 925
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 153/289 (52%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK
Sbjct: 501 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 560
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+ + + + QL L +G R + K LE+++ P+Q ++ L
Sbjct: 561 FEFGTPEQKNTLGMQVKGHVLQL---ALQMYGCRVIQKALESIS-PEQQQEIVHELDGHV 616
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++N Y ++T GC V+Q +E+ Q
Sbjct: 617 LKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQ 676
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L + + L+ + G + S +K+ SNV
Sbjct: 677 TTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNV 736
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + T +I E+ + +++ + NYV+Q + VS+
Sbjct: 737 VEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSE 785
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 125/244 (51%), Gaps = 12/244 (4%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
++G+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +E
Sbjct: 575 QVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIE 634
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGA 267
C + + L + F+ L+TH G R + ++LE+ T +Q + +L L
Sbjct: 635 -CVDP----VALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTA-EQTTPILDELHEHT 688
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
L +D G+YVIQ+ ++H ED L+N V ++ K V++ CV ++ +
Sbjct: 689 EQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGE 748
Query: 328 RERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
R L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H + Y
Sbjct: 749 RTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTY 808
Query: 384 GSNV 387
G ++
Sbjct: 809 GKHI 812
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + + + +E+ Y
Sbjct: 486 RLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAY 545
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q+ L ++ + L LA YG V+Q L P+
Sbjct: 546 SLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQ 605
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++ +L+GH + ++ G++VV++C +E + + + II + V L HP+G
Sbjct: 606 QEIVHELDGHVLKCVKDQNGNHVVQKC-IECVDPVALQFIINAFKG-QVYSLSTHPYGCR 663
Query: 425 VIQSAL 430
VIQ L
Sbjct: 664 VIQRIL 669
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 64/140 (45%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +L + L +DQYG +Q + +E+ ++ V +V L F + VV+K
Sbjct: 681 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 740
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + +RT ++ + + + + + V++ + +++ P Q+ ++ +RP
Sbjct: 741 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHM 800
Query: 268 VTLTKDTNGHYVIQYCVKHF 287
L K T G ++ K++
Sbjct: 801 AALRKYTYGKHINAKLEKYY 820
>gi|345317188|ref|XP_001506884.2| PREDICTED: pumilio homolog 2-like [Ornithorhynchus anatinus]
Length = 429
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 163/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 72 RSRLLEDFRNNRFPNLQLRDLVGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 131
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 132 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 188
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
+ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 189 SPDQQNEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 247
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 248 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 307
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLMHP--FGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 308 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQSDGPHSALYTMMKDQYANYV 367
Query: 426 IQSAL 430
+Q +
Sbjct: 368 VQKMI 372
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 136/272 (50%), Gaps = 24/272 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSL-PKEEIEMIFVEV 187
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ P ++ EM+ E+
Sbjct: 142 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISPDQQNEMV-KEL 200
Query: 188 IDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLK 245
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + +
Sbjct: 201 DGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQR 255
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
+LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+
Sbjct: 256 ILEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLA 314
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANA-------LLLAEDCYGNYVVQHLLAL 358
++ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 315 LSQHKFASNVVEKCVTHASRAERALLIDEVCCQSDGPHSALYTMMKDQYANYVVQKMIDM 374
Query: 359 RVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 375 AEPAQRKIIMHKIRPHISTLRKYTYGKHILAK 406
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 83/205 (40%), Gaps = 57/205 (27%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + L+ YGCR +QR + E+ I E+ +L+
Sbjct: 230 QFIIDAF--------KGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ 281
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L L+ F +V C+ TH RA
Sbjct: 282 DQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALL 340
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +++ +RP TL K T G
Sbjct: 341 IDEVCCQSDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHISTLRKYTYG 400
Query: 277 HYVIQYCVKHFSHEDTKYLLNEVAD 301
KH + KY L AD
Sbjct: 401 --------KHILAKLEKYYLKNSAD 417
>gi|451845819|gb|EMD59130.1| hypothetical protein COCSADRAFT_175690 [Cochliobolus sativus
ND90Pr]
Length = 893
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 148/288 (51%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D++G++V A DQ+G R +Q+ + + E E +F E+ + +LM D FGNYV+QK
Sbjct: 507 LTDIKGHVVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKF 566
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + Q+ ++ + ++ + + R V K LE+ QQ S+V L
Sbjct: 567 FEHGDQTQKKILVGKMKG---HVLELANQMYACRVVQKALEHALTEQQASMV-KELEKDV 622
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ + + ++ N ++ + GC V+Q +E + Q
Sbjct: 623 LKTVKDQNGNHVIQKVIDRVPMHHIQKIVEAFRGNVGVLSVNSYGCRVIQRLLEKVEEPQ 682
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R ++ E+ A L D YGNYV QH++ +P+ A ++ ++ ++ FS +K+ SNV
Sbjct: 683 RRFILTELHAEGPKLITDQYGNYVTQHVIEHGLPEDRAKIVALIKAQFLVFSKHKFASNV 742
Query: 388 VERCLLESGEEQSTRIIIELLRS-----PNVSMLLMHPFGNYVIQSAL 430
VERCL+ S + Q ++ +L NV LL +GNYVIQ L
Sbjct: 743 VERCLICSNDAQRRELVSVVLSKNERGESNVMNLLRDGYGNYVIQKLL 790
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 2/146 (1%)
Query: 285 KHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAE 344
K + ++ L ++ + A D+ G +Q +E + +E + E+ NAL L +
Sbjct: 496 KREQKQSKRWELTDIKGHVVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQ 555
Query: 345 DCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRII 404
D +GNYV+Q L+ +++GH + + Y VV++ L + EQ ++
Sbjct: 556 DVFGNYVIQKFFEHGDQTQKKILVGKMKGHVLELANQMYACRVVQKALEHALTEQQASMV 615
Query: 405 IELLRSPNVSMLLMHPFGNYVIQSAL 430
EL + +V + GN+VIQ +
Sbjct: 616 KELEK--DVLKTVKDQNGNHVIQKVI 639
>gi|237649083|ref|NP_001153692.1| pumilio homolog 2 isoform 2 [Mus musculus]
gi|237649085|ref|NP_001153693.1| pumilio homolog 2 isoform 2 [Mus musculus]
gi|74200874|dbj|BAE24797.1| unnamed protein product [Mus musculus]
Length = 1064
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +++F E++
Sbjct: 707 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQA 766
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 767 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 823
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 824 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 882
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 883 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 942
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 943 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 1002
Query: 426 IQSAL 430
+Q +
Sbjct: 1003 VQKMI 1007
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 799 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 857
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 858 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 912
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 913 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 972
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 973 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 1032
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1033 TYGKHILAK 1041
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 871 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 930
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 931 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 989
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 990 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1046
>gi|389748876|gb|EIM90053.1| ARM repeat-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 400
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 165/294 (56%), Gaps = 13/294 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI-DRVCELMIDPFGNYVVQK 206
LRD++G++V + DQ+G R +Q+ + S EE + +F E++ L+ D FGNYV+QK
Sbjct: 37 LRDIQGHVVEFSGDQHGSRFIQQKLESASSEEKQFVFDEIVPSNALALIQDVFGNYVIQK 96
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L E ++ Q+T ++ T+ + ++ + L +G R V K +E + P+Q S+ + L P
Sbjct: 97 LFEHGTQVQKT---VLATSMETHILSLSLQMYGCRVVQKAVEYIL-PEQQSIFVKELEPH 152
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++VIQ ++ + E ++ + + + ++T GC VLQ C E+
Sbjct: 153 VLRCVKDANGNHVIQKLIERVAPERLGFVPS-FQGHVWELSTHPYGCRVLQRCFEHLAED 211
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q L+ E+ + L +D +GNYV+Q++L PQ ++ QL G ++ S +K+ SN
Sbjct: 212 QTRPLLEELHKHTRNLMQDQFGNYVIQYVLEHGKPQDRNLIINQLRGQMMAMSRHKFASN 271
Query: 387 VVERCLLESGEEQSTRIIIELL------RSPNVSMLLMHPFGNYVIQSALLVSK 434
V E+ L+ + ++I E++ SP ++M + + NYV+Q A++V++
Sbjct: 272 VCEKALVTADSASRRQLIDEIMVPRHDGASPIITM-MKDQYANYVLQRAMVVAE 324
>gi|26450884|dbj|BAC42549.1| putative RNA binding protein [Arabidopsis thaliana]
gi|28950903|gb|AAO63375.1| At3g10360 [Arabidopsis thaliana]
Length = 330
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 146/275 (53%), Gaps = 9/275 (3%)
Query: 161 DQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRIL 220
DQYG R +Q+ + + EE IF E++ LM D FGNYV+QK E + +QR +
Sbjct: 2 DQYGSRFIQQKLKTATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFEHGTTKQRKELA 61
Query: 221 LMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVI 280
+T ++ + L +G R + K LE + QQ +V L + D NG++VI
Sbjct: 62 EQVTG---HVLALSLQMYGCRVIQKALEVVELEQQARMV-KELDGSVMKCVHDQNGNHVI 117
Query: 281 QYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANAL 340
Q C++ + +++++ ++T GC V+Q +E+ + +R++ E I +++
Sbjct: 118 QKCIERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQRIIMEEIMDSV 177
Query: 341 -LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQ 399
LA+D YGNYV+QH++ P + ++ +L G V S K+ SNVVE+CL G E+
Sbjct: 178 CTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNVVEKCLTFGGPEE 237
Query: 400 STRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
++ E+L + + ++ PFGNYV+Q L
Sbjct: 238 RQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVL 272
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 134/253 (52%), Gaps = 11/253 (4%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G+++AL+ YGCR +Q+ + + E+ + E+ V + + D GN+V+QK +E
Sbjct: 66 GHVLALSLQMYGCRVIQKALEVVELEQQARMVKELDGSVMKCVHDQNGNHVIQKCIERLP 125
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
++ I ++++ +++ + + +G R + ++LE++ + + +++ + TL +
Sbjct: 126 QDW---IQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQRIIMEEIMDSVCTLAQ 182
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D G+YVIQ+ ++H + ++N++A ++ K V++ C+ + +R+ LV
Sbjct: 183 DQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNVVEKCLTFGGPEERQVLV 242
Query: 333 AEIIA----NALLLA--EDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
E++ N L A +D +GNYVVQ +L Q A +L +++ H + YG +
Sbjct: 243 NEMLGYTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLALILSRIKVHLNALKRYTYGKH 302
Query: 387 VVERC--LLESGE 397
+V R L+ +GE
Sbjct: 303 IVARVEKLITTGE 315
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 99/194 (51%), Gaps = 4/194 (2%)
Query: 235 LNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKY 294
++ +G R + + L+ T+ ++ + + + P TL D G+YVIQ +H + + K
Sbjct: 1 MDQYGSRFIQQKLKTATDEEK-NAIFPEILPYGRTLMTDVFGNYVIQKFFEHGTTKQRKE 59
Query: 295 LLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQH 354
L +V + ++ GC V+Q +E + Q+ R+V E+ + + D GN+V+Q
Sbjct: 60 LAEQVTGHVLALSLQMYGCRVIQKALEVVELEQQARMVKELDGSVMKCVHDQNGNHVIQK 119
Query: 355 LLALRVPQ-ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNV 413
+ R+PQ ++ G ++ S + YG V++R L + ++ RII+E + +V
Sbjct: 120 CIE-RLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQRIIMEEIMD-SV 177
Query: 414 SMLLMHPFGNYVIQ 427
L +GNYVIQ
Sbjct: 178 CTLAQDQYGNYVIQ 191
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ ++ EE +++ E++ E +M DPFGN
Sbjct: 206 INKLAGQIVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGN 265
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLA 261
YVVQK++E C ++ IL + L R H + V KL+ +S LA
Sbjct: 266 YVVQKVLETCDDQSLALILSRIKVHLNALKRYTYGKHIVARVEKLITTGERRIGLSSSLA 325
Query: 262 A 262
A
Sbjct: 326 A 326
>gi|442618164|ref|NP_001262404.1| pumilio, isoform H [Drosophila melanogaster]
gi|440217235|gb|AGB95786.1| pumilio, isoform H [Drosophila melanogaster]
Length = 921
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 153/289 (52%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK
Sbjct: 497 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 556
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+ + + + QL L +G R + K LE+++ P+Q ++ L
Sbjct: 557 FEFGTPEQKNTLGMQVKGHVLQL---ALQMYGCRVIQKALESIS-PEQQQEIVHELDGHV 612
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++N Y ++T GC V+Q +E+ Q
Sbjct: 613 LKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQ 672
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L + + L+ + G + S +K+ SNV
Sbjct: 673 TTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNV 732
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + T +I E+ + +++ + NYV+Q + VS+
Sbjct: 733 VEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSE 781
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 125/244 (51%), Gaps = 12/244 (4%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
++G+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +E
Sbjct: 571 QVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIE 630
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGA 267
C + + L + F+ L+TH G R + ++LE+ T +Q + +L L
Sbjct: 631 -CVDP----VALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTA-EQTTPILDELHEHT 684
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
L +D G+YVIQ+ ++H ED L+N V ++ K V++ CV ++ +
Sbjct: 685 EQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGE 744
Query: 328 RERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
R L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H + Y
Sbjct: 745 RTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTY 804
Query: 384 GSNV 387
G ++
Sbjct: 805 GKHI 808
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + + + +E+ Y
Sbjct: 482 RLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAY 541
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q+ L ++ + L LA YG V+Q L P+
Sbjct: 542 SLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQ 601
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++ +L+GH + ++ G++VV++C +E + + + II + V L HP+G
Sbjct: 602 QEIVHELDGHVLKCVKDQNGNHVVQKC-IECVDPVALQFIINAFKG-QVYSLSTHPYGCR 659
Query: 425 VIQSAL 430
VIQ L
Sbjct: 660 VIQRIL 665
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 64/140 (45%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +L + L +DQYG +Q + +E+ ++ V +V L F + VV+K
Sbjct: 677 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 736
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + +RT ++ + + + + + V++ + +++ P Q+ ++ +RP
Sbjct: 737 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHM 796
Query: 268 VTLTKDTNGHYVIQYCVKHF 287
L K T G ++ K++
Sbjct: 797 AALRKYTYGKHINAKLEKYY 816
>gi|74208592|dbj|BAE37556.1| unnamed protein product [Mus musculus]
Length = 980
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +++F E++
Sbjct: 623 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQA 682
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 683 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 739
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 740 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 798
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 799 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 858
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 859 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 918
Query: 426 IQSAL 430
+Q +
Sbjct: 919 VQKMI 923
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 715 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 773
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 774 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 828
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 829 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 888
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 889 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 948
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 949 TYGKHILAK 957
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 787 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 846
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 847 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 905
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 906 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 962
>gi|194903420|ref|XP_001980865.1| GG17394 [Drosophila erecta]
gi|190652568|gb|EDV49823.1| GG17394 [Drosophila erecta]
Length = 937
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 153/289 (52%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK
Sbjct: 513 LRDLVNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 572
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+ + + + QL L +G R + K LE+++ P+Q ++ L
Sbjct: 573 FEFGTPEQKNTLGMQVKGHVLQL---ALQMYGCRVIQKALESIS-PEQQQEIVHELDGHV 628
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++N Y ++T GC V+Q +E+ Q
Sbjct: 629 LKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQ 688
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L + + L+ + G + S +K+ SNV
Sbjct: 689 TTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNV 748
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + T +I E+ + +++ + NYV+Q + VS+
Sbjct: 749 VEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSE 797
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 125/244 (51%), Gaps = 12/244 (4%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
++G+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +E
Sbjct: 587 QVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIE 646
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGA 267
C + + L + F+ L+TH G R + ++LE+ T +Q + +L L
Sbjct: 647 -CVDP----VALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTA-EQTTPILDELHEHT 700
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
L +D G+YVIQ+ ++H ED L+N V ++ K V++ CV ++ +
Sbjct: 701 EQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGE 760
Query: 328 RERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
R L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H + Y
Sbjct: 761 RTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTY 820
Query: 384 GSNV 387
G ++
Sbjct: 821 GKHI 824
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + + + +E+ Y
Sbjct: 498 RLLEDFRNQRYPNLQLRDLVNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAY 557
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q+ L ++ + L LA YG V+Q L P+
Sbjct: 558 SLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQ 617
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++ +L+GH + ++ G++VV++C +E + + + II + V L HP+G
Sbjct: 618 QEIVHELDGHVLKCVKDQNGNHVVQKC-IECVDPVALQFIINAFKG-QVYSLSTHPYGCR 675
Query: 425 VIQSAL 430
VIQ L
Sbjct: 676 VIQRIL 681
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 64/140 (45%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +L + L +DQYG +Q + +E+ ++ V +V L F + VV+K
Sbjct: 693 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 752
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + +RT ++ + + + + + V++ + +++ P Q+ ++ +RP
Sbjct: 753 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHM 812
Query: 268 VTLTKDTNGHYVIQYCVKHF 287
L K T G ++ K++
Sbjct: 813 AALRKYTYGKHINAKLEKYY 832
>gi|410955766|ref|XP_003984521.1| PREDICTED: pumilio homolog 2 isoform 2 [Felis catus]
Length = 1063
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 162/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 706 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 765
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 766 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 822
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 823 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 881
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 882 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 941
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL-----RSPNVSMLLMHPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ + ++ + NYV
Sbjct: 942 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGAHSALYTMMKDQYANYV 1001
Query: 426 IQSAL 430
+Q +
Sbjct: 1002 VQKMI 1006
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 129/249 (51%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 798 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 856
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 857 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 911
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 912 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 971
Query: 329 ERLVAEII-----ANALL--LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ A++ L + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 972 ALLIDEVCCQNDGAHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 1031
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1032 TYGKHILAK 1040
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 870 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 929
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 930 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGAHSA 988
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 989 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1045
>gi|308163019|gb|EFO65384.1| Pumilio-family RNA-binding protein, putative [Giardia lamblia P15]
Length = 652
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 161/317 (50%), Gaps = 23/317 (7%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE-----LMIDPFGNYVV 204
D +V L K+ GC+ LQ+ ++ P + ++ V + + L+I P GNY
Sbjct: 319 DYERKLVLLFKEPTGCKTLQQYLTDFPDKSRYLLDVFIAEYNTPSLMEGLLIHPSGNYCF 378
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK++E+ QR +ILL++ + F+ IC N HG R++ KL E +++ ++ +++ L
Sbjct: 379 QKVIEVSDASQRLKILLLIQDSLFE---ICHNLHGTRSIQKLFERVSSDEEKAIIAQQLG 435
Query: 265 PG--AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
G + L D NG++ +Q C++ F+ +D ++ +++ ++T + GCC++Q C++
Sbjct: 436 TGDRIIKLIVDINGNHCVQRCIETFAPKDCTFIYDQIIRELVLVSTHQHGCCIIQRCLDL 495
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITAS-----LLRQLEGHYVS 377
AQR ++V I + + L D +GNYV Q+ L + S L+R + GH S
Sbjct: 496 CSEAQRVQIVTAIKTHVMELIVDRFGNYVFQYSLEKANNGLCGSISADDLIRPILGHEGS 555
Query: 378 FSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVS---- 433
K+ S+ VE+CL + T I L+ S + L M FGNYVIQ +
Sbjct: 556 LVSQKFSSHAVEKCLKYGSRKIRTLITENLMASDSFLSLAMDKFGNYVIQRVFTCATDEQ 615
Query: 434 ----KVRLFSSPPISVC 446
R+ +SP + C
Sbjct: 616 KRIISQRVLASPEVLSC 632
>gi|28972107|dbj|BAC65507.1| mKIAA0235 protein [Mus musculus]
Length = 969
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +++F E++
Sbjct: 612 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQA 671
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 672 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 728
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 729 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 787
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 788 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 847
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 848 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 907
Query: 426 IQSAL 430
+Q +
Sbjct: 908 VQKMI 912
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 704 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 762
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 763 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 817
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 818 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 877
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ + + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 878 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 937
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 938 TYGKHILAK 946
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 776 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 835
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 836 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 894
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 895 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 951
>gi|410955768|ref|XP_003984522.1| PREDICTED: pumilio homolog 2 isoform 3 [Felis catus]
Length = 1007
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 162/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 650 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 709
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 710 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 766
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 767 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 825
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 826 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 885
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL-----RSPNVSMLLMHPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ + ++ + NYV
Sbjct: 886 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGAHSALYTMMKDQYANYV 945
Query: 426 IQSAL 430
+Q +
Sbjct: 946 VQKMI 950
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 136/271 (50%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ + E+
Sbjct: 720 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELD 779
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 780 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 834
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 835 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 893
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEII-----ANALL--LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ A++ L + +D Y NYVVQ ++ +
Sbjct: 894 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGAHSALYTMMKDQYANYVVQKMIDMA 953
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 954 EPAQRKIIMHKIRPHITTLRKYTYGKHILAK 984
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + L+ YGCR +QR + E+ I E+ +L+
Sbjct: 808 QFIIDAF--------KGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ 859
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L L+ F +V C+ TH RA
Sbjct: 860 DQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALL 918
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +++ +RP TL K T G
Sbjct: 919 IDEVCCQNDGAHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYG 978
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 979 KHILAKLEKYY 989
>gi|321475178|gb|EFX86141.1| hypothetical protein DAPPUDRAFT_308458 [Daphnia pulex]
Length = 581
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 163/310 (52%), Gaps = 14/310 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRD+ +IV ++DQ+G R +Q+ + E +M+F E+I
Sbjct: 222 RSRLLEDFRNNRFPNLQLRDIANHIVEFSQDQHGSRFIQQKLERATPAEKQMVFTEIIVG 281
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
LM D FGNYV+QK E S EQ++ + + ++ + L +G R + K LE++
Sbjct: 282 TYALMTDVFGNYVIQKFFEFGSPEQKSTLAQKIRG---HVLPLALQMYGCRVIQKALESV 338
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
+ QQ +V L + KD NG++V+Q C++ +++++ ++T
Sbjct: 339 PSDQQKEIV-RELDGHVLKCVKDQNGNHVVQKCIECVDPMQLQFIIDAFEGQVLSLSTHP 397
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ N L +D YGNYV+QH+L P+ ++
Sbjct: 398 YGCRVIQRILEHCTPEQTSPVLNELHHNTETLIQDQYGNYVIQHVLEHGKPEDKLRIVTA 457
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLR----SPNVSM--LLMHPFGNY 424
++G +S S +K+ SNVVE+C+ + + +I E++ SP+ + ++ + NY
Sbjct: 458 VKGKVLSLSQHKFASNVVEKCVSHATRSERASLIDEVISFNDASPHSPLHTMMKDQYANY 517
Query: 425 VIQSALLVSK 434
V+Q + V++
Sbjct: 518 VVQKMIDVAE 527
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 132/252 (52%), Gaps = 16/252 (6%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ +RG+++ LA YGCR +Q+ + S+P ++ + I E+ V + + D GN+VVQK +
Sbjct: 312 QKIRGHVLPLALQMYGCRVIQKALESVPSDQQKEIVRELDGHVLKCVKDQNGNHVVQKCI 371
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + + + ++ D F+ + L+TH G R + ++LE+ T P+Q S VL L
Sbjct: 372 E-CVDPMQLQFII----DAFEGQVLSLSTHPYGCRVIQRILEHCT-PEQTSPVLNELHHN 425
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
TL +D G+YVIQ+ ++H ED ++ V ++ K V++ CV ++ +
Sbjct: 426 TETLIQDQYGNYVIQHVLEHGKPEDKLRIVTAVKGKVLSLSQHKFASNVVEKCVSHATRS 485
Query: 327 QRERLVAEIIA--------NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSF 378
+R L+ E+I+ + +D Y NYVVQ ++ + P L+ ++ H +
Sbjct: 486 ERASLIDEVISFNDASPHSPLHTMMKDQYANYVVQKMIDVAEPSQRKLLMHKIRPHVSTL 545
Query: 379 SCNKYGSNVVER 390
YG +++ +
Sbjct: 546 RKYTYGKHILAK 557
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 50/192 (26%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F+ G +++L+ YGCR +QR + E+ + E+ L+
Sbjct: 380 QFIIDAFE--------GQVLSLSTHPYGCRVIQRILEHCTPEQTSPVLNELHHNTETLIQ 431
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E + RI+ L L+ F +V C+ +H R+
Sbjct: 432 DQYGNYVIQHVLEHGKPEDKLRIVTAVKGKVLSLSQHKFASNVVEKCV-SHATRSERASL 490
Query: 243 ---------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTN 275
V++ + ++ P Q L++ +RP TL K T
Sbjct: 491 IDEVISFNDASPHSPLHTMMKDQYANYVVQKMIDVAEPSQRKLLMHKIRPHVSTLRKYTY 550
Query: 276 GHYVIQYCVKHF 287
G +++ K+F
Sbjct: 551 GKHILAKLEKYF 562
>gi|296417426|ref|XP_002838359.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634287|emb|CAZ82550.1| unnamed protein product [Tuber melanosporum]
Length = 999
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 155/291 (53%), Gaps = 11/291 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ ++V + DQ+G R +Q+ + + +E E IF E+ +LM D FGNYV+QK
Sbjct: 614 LKDIFHHVVEFSGDQHGSRFIQQKLETANSDEKETIFAEIKSNSLQLMTDVFGNYVIQKF 673
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q++ ++ + ++ + L +G R V K LE++ QQ SLV L
Sbjct: 674 FEHGNQLQKS---ILAKQMEGHVLALSLQMYGCRVVQKALEHILTEQQASLV-KELDGSV 729
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q ++ E ++++ + +AT GC V+Q +E+
Sbjct: 730 LKCVKDQNGNHVVQKAIERVPAEHIQFIIKAFRGQVHTLATHPYGCRVIQRMLEHCDETA 789
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ L+ E+ + L +D YGNYV QH++ P+ A ++ + + FS +K+ SNV
Sbjct: 790 QASLLQELHVCTIALVQDQYGNYVTQHVIEHGKPEDRAKIISLVTTQLLQFSKHKFASNV 849
Query: 388 VERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSALLV 432
VE+ + G E+ R I++++ +P + +L+ +GNYVIQ L +
Sbjct: 850 VEKSIT-FGSEEEKREIVKVVTTPRSDGNSPLQILMRDQYGNYVIQKLLTL 899
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 11/198 (5%)
Query: 237 THGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF---SHEDTK 293
+GIR + + T P IS ++A P A + GH + ++ F S + +
Sbjct: 556 ANGIRVPMP---SYTGPP-ISPLIAPTHPAARRPVHEDFGHNLRSVLLEEFRANSKSNKR 611
Query: 294 YLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQ 353
Y L ++ + + D+ G +Q +E + ++E + AEI +N+L L D +GNYV+Q
Sbjct: 612 YELKDIFHHVVEFSGDQHGSRFIQQKLETANSDEKETIFAEIKSNSLQLMTDVFGNYVIQ 671
Query: 354 HLLALRVPQITASLL-RQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q+ S+L +Q+EGH ++ S YG VV++ L EQ ++ EL S
Sbjct: 672 KFFE-HGNQLQKSILAKQMEGHVLALSLQMYGCRVVQKALEHILTEQQASLVKELDGS-- 728
Query: 413 VSMLLMHPFGNYVIQSAL 430
V + GN+V+Q A+
Sbjct: 729 VLKCVKDQNGNHVVQKAI 746
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 115/295 (38%), Gaps = 55/295 (18%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
S +++L G+++ KDQ G +Q+ + +P E I+ I +V L P+G V+
Sbjct: 719 ASLVKELDGSVLKCVKDQNGNHVVQKAIERVPAEHIQFIIKAFRGQVHTLATHPYGCRVI 778
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
Q+++E C E + +L Q + +C
Sbjct: 779 QRMLEHCDETAQASLL--------QELHVC------------------------------ 800
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+ L +D G+YV Q+ ++H ED +++ V + K V++ + +
Sbjct: 801 --TIALVQDQYGNYVTQHVIEHGKPEDRAKIISLVTTQLLQFSKHKFASNVVEKSITFGS 858
Query: 325 GAQRERLVAEII-----ANALL--LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVS 377
++ +V + N+ L L D YGNYV+Q LL L +L+ Q++ +
Sbjct: 859 EEEKREIVKVVTTPRSDGNSPLQILMRDQYGNYVIQKLLTLLQGPDRETLVEQIKPQLQA 918
Query: 378 FSCNKYGS--NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
YG N +E+ + S T P S L P IQS +
Sbjct: 919 LKKFTYGKQINAIEKLIYNSSTPSQT------ASPPPGSALATPPLLTMDIQSPV 967
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 5/143 (3%)
Query: 141 DSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFG 200
++ S L++L +AL +DQYG Q + E+ I V ++ + F
Sbjct: 787 ETAQASLLQELHVCTIALVQDQYGNYVTQHVIEHGKPEDRAKIISLVTTQLLQFSKHKFA 846
Query: 201 NYVVQKLVELCSEEQRTRILLMLT---NDDFQLVRICL-NTHGIRAVLKLLENLTNPQQI 256
+ VV+K + SEE++ I+ ++T +D ++I + + +G + KLL L P +
Sbjct: 847 SNVVEKSITFGSEEEKREIVKVVTTPRSDGNSPLQILMRDQYGNYVIQKLLTLLQGPDRE 906
Query: 257 SLVLAALRPGAVTLTKDTNGHYV 279
+LV ++P L K T G +
Sbjct: 907 TLV-EQIKPQLQALKKFTYGKQI 928
>gi|195499330|ref|XP_002096903.1| GE24797 [Drosophila yakuba]
gi|194183004|gb|EDW96615.1| GE24797 [Drosophila yakuba]
Length = 935
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 153/289 (52%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK
Sbjct: 511 LRDLVNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 570
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+ + + + QL L +G R + K LE+++ P+Q ++ L
Sbjct: 571 FEFGTPEQKNTLGMQVKGHVLQL---ALQMYGCRVIQKALESIS-PEQQQEIVHELDGHV 626
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++N Y ++T GC V+Q +E+ Q
Sbjct: 627 LKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQ 686
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L + + L+ + G + S +K+ SNV
Sbjct: 687 TTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNV 746
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + T +I E+ + +++ + NYV+Q + VS+
Sbjct: 747 VEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSE 795
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 125/244 (51%), Gaps = 12/244 (4%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
++G+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +E
Sbjct: 585 QVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIE 644
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGA 267
C + + L + F+ L+TH G R + ++LE+ T +Q + +L L
Sbjct: 645 -CVDP----VALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTA-EQTTPILDELHEHT 698
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
L +D G+YVIQ+ ++H ED L+N V ++ K V++ CV ++ +
Sbjct: 699 EQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGE 758
Query: 328 RERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
R L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H + Y
Sbjct: 759 RTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTY 818
Query: 384 GSNV 387
G ++
Sbjct: 819 GKHI 822
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + + + +E+ Y
Sbjct: 496 RLLEDFRNQRYPNLQLRDLVNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAY 555
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q+ L ++ + L LA YG V+Q L P+
Sbjct: 556 SLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQ 615
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++ +L+GH + ++ G++VV++C +E + + + II + V L HP+G
Sbjct: 616 QEIVHELDGHVLKCVKDQNGNHVVQKC-IECVDPVALQFIINAFKG-QVYSLSTHPYGCR 673
Query: 425 VIQSAL 430
VIQ L
Sbjct: 674 VIQRIL 679
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 64/140 (45%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +L + L +DQYG +Q + +E+ ++ V +V L F + VV+K
Sbjct: 691 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 750
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + +RT ++ + + + + + V++ + +++ P Q+ ++ +RP
Sbjct: 751 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHM 810
Query: 268 VTLTKDTNGHYVIQYCVKHF 287
L K T G ++ K++
Sbjct: 811 AALRKYTYGKHINAKLEKYY 830
>gi|451995215|gb|EMD87684.1| hypothetical protein COCHEDRAFT_1034063 [Cochliobolus
heterostrophus C5]
Length = 889
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 148/288 (51%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D++G++V A DQ+G R +Q+ + + E E +F E+ + +LM D FGNYV+QK
Sbjct: 503 LTDIKGHVVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKF 562
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + Q+ ++ + ++ + + R V K LE+ QQ S+V L
Sbjct: 563 FEHGDQTQKKILVGKMKG---HVLELANQMYACRVVQKALEHALTEQQASMV-KELEKDV 618
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ + + ++ N ++ + GC V+Q +E + Q
Sbjct: 619 LKTVKDQNGNHVIQKVIDRVPMHHIQKIVEAFRGNVGVLSVNSYGCRVIQRLLEKVEEPQ 678
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R ++ E+ A L D YGNYV QH++ +P+ A ++ ++ ++ FS +K+ SNV
Sbjct: 679 RRFILTELHAEGPKLITDQYGNYVTQHVIEHGLPEDRAKIVALIKAQFLVFSKHKFASNV 738
Query: 388 VERCLLESGEEQSTRIIIELLRS-----PNVSMLLMHPFGNYVIQSAL 430
VERCL+ S + Q ++ +L NV LL +GNYVIQ L
Sbjct: 739 VERCLICSDDAQRRELVSVVLSKNERGESNVMNLLRDGYGNYVIQKLL 786
>gi|413921572|gb|AFW61504.1| hypothetical protein ZEAMMB73_884166 [Zea mays]
Length = 986
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 156/304 (51%), Gaps = 19/304 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G I+ + DQ+G R +Q+ + + EE +F EV+ LM D FGNYV+QK
Sbjct: 655 LSDITGRIIEYSADQHGSRFIQQKLENCTAEEKAYVFAEVLPHASSLMTDVFGNYVIQKF 714
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQR + L ++ + L +G R + K LE + Q+I LV L
Sbjct: 715 FEHGTREQRRDLATKLVG---HVLPLSLQMYGCRVIQKALEVMELDQKIDLV-HELDGHV 770
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG-A 326
+ +D NG++VIQ C++ E ++++ ++ GC V+Q +E+ G +
Sbjct: 771 MRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVASLSMHPYGCRVIQRVLEHCGGTS 830
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q + +V EI+ +A +LA+D YGNYV QH+L + ++ +L G V+ S NK+ SN
Sbjct: 831 QSQCIVDEILQSACVLAQDQYGNYVTQHVLERGNAHERSQIIIKLAGQVVTMSQNKFASN 890
Query: 387 VVERCLLESGEEQSTRIIIELLR----SPNVSMLLMHPFGNYVIQS----------ALLV 432
V+E+C + +I +++ + N+ ++ + NYV+Q LLV
Sbjct: 891 VIEKCFQHGDMAERDLLIRQIVEQTEGNDNLLAMMKDQYANYVVQKILETCNENQRELLV 950
Query: 433 SKVR 436
S+V+
Sbjct: 951 SRVK 954
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 7/225 (3%)
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L EL S R L +T +++ + HG R + + LEN T ++ + V A + P
Sbjct: 642 LEELKSNRARRVELSDITG---RIIEYSADQHGSRFIQQKLENCTA-EEKAYVFAEVLPH 697
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
A +L D G+YVIQ +H + E + L ++ + ++ GC V+Q +E +
Sbjct: 698 ASSLMTDVFGNYVIQKFFEHGTREQRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELD 757
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q+ LV E+ + + D GN+V+Q + + ++ +G S S + YG
Sbjct: 758 QKIDLVHELDGHVMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVASLSMHPYGCR 817
Query: 387 VVERCLLE-SGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
V++R L G QS I+ E+L+S +L +GNYV Q L
Sbjct: 818 VIQRVLEHCGGTSQSQCIVDEILQS--ACVLAQDQYGNYVTQHVL 860
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ +L G+++ +DQ G +Q+ + +P E I + +V L + P+G V+Q++
Sbjct: 763 VHELDGHVMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVASLSMHPYGCRVIQRV 822
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICL---NTHGIRAVLKLLENLTNPQQISLVLAALR 264
+E C +++ ++ D L C+ + +G +LE N + S ++ L
Sbjct: 823 LEHCGGTSQSQCIV-----DEILQSACVLAQDQYGNYVTQHVLER-GNAHERSQIIIKLA 876
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVA------DNCYGIATDKSGCCVLQH 318
VT++++ VI+ C +H + L+ ++ DN + D+ V+Q
Sbjct: 877 GQVVTMSQNKFASNVIEKCFQHGDMAERDLLIRQIVEQTEGNDNLLAMMKDQYANYVVQK 936
Query: 319 CVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLAL 358
+E QRE LV+ + + L + YG ++V + L
Sbjct: 937 ILETCNENQRELLVSRVKGHMQALRKYTYGKHIVSRVEQL 976
>gi|156845539|ref|XP_001645660.1| hypothetical protein Kpol_541p44 [Vanderwaltozyma polyspora DSM
70294]
gi|156116326|gb|EDO17802.1| hypothetical protein Kpol_541p44 [Vanderwaltozyma polyspora DSM
70294]
Length = 756
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 184/391 (47%), Gaps = 61/391 (15%)
Query: 78 LVENGFFSHPCQEAEPINQDSSILNLLHNHNFDGLRSNGNELSSVPRNQWMSSLSLKRNQ 137
+V+ FF P E EP N + NGN S+ N + + + N
Sbjct: 60 IVDYSFFQAPPFEIEPNNPN---------------LKNGNSTPSLLCNNNIKTTTQSSN- 103
Query: 138 WLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEI---EMIFVEVIDRVCEL 194
D S+ L + V LA DQYGCR LQ+ + S P E + ++++ ++ + +L
Sbjct: 104 -----LDIHSIPLLELDYVKLATDQYGCRFLQKKLES-PSESMIVKDVLYEQIKPIILDL 157
Query: 195 MIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQ 254
M+DPFGNY++QKL E + QR+ I+ + FQL +N +G R+ K+++ + N
Sbjct: 158 MLDPFGNYLIQKLSEYINSSQRSLIIQSIYPHVFQL---SINQYGTRSFQKIIDTIDNEA 214
Query: 255 QISLVLAALR------PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVA--DNCYGI 306
QI +++ VTL D NG++VIQ C+ F +++N + DN I
Sbjct: 215 QIDMIIKGFEQEYTTIKQIVTLINDLNGNHVIQKCILKFPTSKFNFIINAMVHEDNIIAI 274
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ--IT 364
+T K GCCVLQ + S Q ++ +I+ L D +GNY++Q LL +R +
Sbjct: 275 STHKHGCCVLQKLLSVSTLQQFFKISIKIVEYLPNLINDQFGNYIIQFLLDVRELDFYLV 334
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCL--------------LESGEEQSTRIIIEL--- 407
+ + +++E S K+ SNV+E+ + ES S + I
Sbjct: 335 SEIYKKIELSLCQLSRLKFSSNVIEKFIKKIYKVMTSYIIPRKESSSNTSDDLFISTVGI 394
Query: 408 ------LRSPNVSMLLMHPFGNYVIQSALLV 432
L + N+S ++ +GNYV+Q+ L V
Sbjct: 395 LFSIIDLFTNNLSNIIRDNYGNYVLQTLLDV 425
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 104/220 (47%), Gaps = 16/220 (7%)
Query: 231 VRICLNTHGIRAVLKLLENLTNPQQISLVL-AALRPGAVTLTKDTNGHYVIQYCVKHFSH 289
V++ + +G R + K LE+ + + VL ++P + L D G+Y+IQ ++ +
Sbjct: 117 VKLATDQYGCRFLQKKLESPSESMIVKDVLYEQIKPIILDLMLDPFGNYLIQKLSEYINS 176
Query: 290 EDTKYLLNEVADNCYGIATDKSGCCVLQHCVE-YSKGAQRERLVA------EIIANALLL 342
++ + + + ++ ++ G Q ++ AQ + ++ I + L
Sbjct: 177 SQRSLIIQSIYPHVFQLSINQYGTRSFQKIIDTIDNEAQIDMIIKGFEQEYTTIKQIVTL 236
Query: 343 AEDCYGNYVVQHLLALRVPQITASLLRQL---EGHYVSFSCNKYGSNVVERCLLESGEEQ 399
D GN+V+Q + L+ P + + E + ++ S +K+G V+++ L S +Q
Sbjct: 237 INDLNGNHVIQKCI-LKFPTSKFNFIINAMVHEDNIIAISTHKHGCCVLQKLLSVSTLQQ 295
Query: 400 STRIIIELLRS-PNVSMLLMHPFGNYVIQSALLVSKVRLF 438
+I I+++ PN L+ FGNY+IQ L V ++ +
Sbjct: 296 FFKISIKIVEYLPN---LINDQFGNYIIQFLLDVRELDFY 332
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Query: 309 DKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLAL--RVPQITAS 366
D G ++Q EY +QR ++ I + L+ + YG Q ++ QI
Sbjct: 160 DPFGNYLIQKLSEYINSSQRSLIIQSIYPHVFQLSINQYGTRSFQKIIDTIDNEAQIDM- 218
Query: 367 LLRQLEGHY------VSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHP 420
+++ E Y V+ + G++V+++C+L+ + II ++ N+ + H
Sbjct: 219 IIKGFEQEYTTIKQIVTLINDLNGNHVIQKCILKFPTSKFNFIINAMVHEDNIIAISTHK 278
Query: 421 FGNYVIQSALLVSKVRLFSSPPISVCK 447
G V+Q L VS ++ F I + +
Sbjct: 279 HGCCVLQKLLSVSTLQQFFKISIKIVE 305
>gi|365759578|gb|EHN01360.1| Puf3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 866
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 159/305 (52%), Gaps = 21/305 (6%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
SL+D+ G+ + KDQ+G R +QR +++ P E E+IF E+ D EL D FGNYV+QK
Sbjct: 522 SLKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQK 581
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E S+ Q+ ++ + + L + R + K LE + + Q+I LVL L
Sbjct: 582 FFEFGSKIQKDALVEQFKG---HMKELSLQMYACRVIQKALEYIDSKQRIKLVL-ELSDT 637
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ + KD NG++VIQ ++ E ++L+ + + Y ++T GC V+Q +E+
Sbjct: 638 VLQMIKDQNGNHVIQKAIETIPLEKLPFVLSSLTGHIYHLSTHSYGCRVIQRLLEFGSSE 697
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLA------LRVPQITASLLRQLEGHYVSFSC 380
++ E+ L +D YGNYV+Q++L + + ++ + + V +S
Sbjct: 698 DERNILNELKDFIPYLIQDQYGNYVIQYILQQDQFTNKEMVDVKQEIIETVASNVVEYSK 757
Query: 381 NKYGSNVVERCLLESGEEQSTRIIIELL-RSPNVS--------MLLM--HPFGNYVIQSA 429
+K+ SNVVE+ +L ++Q I+ ++L R N + M+LM F NYVIQ
Sbjct: 758 HKFASNVVEKSILYGSKDQKDLIMSKILPRDKNHALNLEDDSPMILMIKDQFANYVIQKL 817
Query: 430 LLVSK 434
+ VS+
Sbjct: 818 VNVSE 822
>gi|242781200|ref|XP_002479753.1| mRNA binding protein Pumilio 2, putative [Talaromyces stipitatus
ATCC 10500]
gi|218719900|gb|EED19319.1| mRNA binding protein Pumilio 2, putative [Talaromyces stipitatus
ATCC 10500]
Length = 943
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 160/291 (54%), Gaps = 15/291 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ +IV + DQ+G R +Q+ + S +E + +F E+ +LM D FGNYVVQKL
Sbjct: 514 LKDIYNHIVEFSGDQHGSRFIQQKLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKL 573
Query: 208 VELCSEEQRTRILL--MLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
E ++ Q+ RIL M T+ ++ + +G R V K LE++ QQ ++V L
Sbjct: 574 FEHGNQSQK-RILANQMKTH----ILALSTQMYGCRVVQKALEHILTDQQAAMV-KELDQ 627
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
+ +D NG++VIQ ++ + +++++ N +AT GC V+Q +E+ +
Sbjct: 628 HVMKCVRDQNGNHVIQKAIERVPTQHIRFIIDAFKGNVNKLATHPYGCRVIQRMLEHCET 687
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
RE ++AE+ LL D +GNYV+QH++ + + +++ + + +FS +K+ S
Sbjct: 688 PDRESILAELHVCTELLIPDQFGNYVIQHVIENGEEKDRSVMIKSVIKNVHNFSKHKFAS 747
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSAL 430
NVVE+ +E GEE R II LL + N + L+ +GNYVIQ L
Sbjct: 748 NVVEKS-IEFGEESQRREIIRLLTAHNDRGESPLLALMRDQYGNYVIQKVL 797
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 105/247 (42%), Gaps = 51/247 (20%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++ +I+AL+ YGCR +Q+ + + ++ + E+ V + + D GN+V+QK +E
Sbjct: 589 MKTHILALSTQMYGCRVVQKALEHILTDQQAAMVKELDQHVMKCVRDQNGNHVIQKAIER 648
Query: 211 CSEEQRTRILLMLTNDDFQ--LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
Q R ++ D F+ + ++ + +G R + ++LE+ P + S +LA L
Sbjct: 649 V-PTQHIRFII----DAFKGNVNKLATHPYGCRVIQRMLEHCETPDRES-ILAELHVCTE 702
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS----- 323
L D G+YVIQ+ +++ +D ++ V N + + K V++ +E+
Sbjct: 703 LLIPDQFGNYVIQHVIENGEEKDRSVMIKSVIKNVHNFSKHKFASNVVEKSIEFGEESQR 762
Query: 324 --------------------------------------KGAQRERLVAEIIANALLLAED 345
KG++RE ++ EI L +
Sbjct: 763 REIIRLLTAHNDRGESPLLALMRDQYGNYVIQKVLGQVKGSEREMIIDEIKPLLSQLKKF 822
Query: 346 CYGNYVV 352
YG ++
Sbjct: 823 SYGKQIM 829
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ +Y L ++ ++ + D+ G +Q +E + +++++ EI N L L D +GNY
Sbjct: 509 NKRYELKDIYNHIVEFSGDQHGSRFIQQKLESANSDEKDQVFREIQPNCLQLMTDVFGNY 568
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
VVQ L L Q++ H ++ S YG VV++ L +Q ++ EL +
Sbjct: 569 VVQKLFEHGNQSQKRILANQMKTHILALSTQMYGCRVVQKALEHILTDQQAAMVKELDQ- 627
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 628 -HVMKCVRDQNGNHVIQKAI 646
>gi|410955764|ref|XP_003984520.1| PREDICTED: pumilio homolog 2 isoform 1 [Felis catus]
Length = 984
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 162/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 627 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 686
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 687 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 743
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 744 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 802
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 803 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 862
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL-----RSPNVSMLLMHPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ + ++ + NYV
Sbjct: 863 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGAHSALYTMMKDQYANYV 922
Query: 426 IQSAL 430
+Q +
Sbjct: 923 VQKMI 927
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 129/249 (51%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 719 IRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIE- 777
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L
Sbjct: 778 CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTE 832
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV ++ A+R
Sbjct: 833 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 892
Query: 329 ERLVAEII-----ANALL--LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ A++ L + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 893 ALLIDEVCCQNDGAHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 952
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 953 TYGKHILAK 961
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 791 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 850
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 851 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGAHSA 909
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 910 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 966
>gi|195055380|ref|XP_001994597.1| GH15257 [Drosophila grimshawi]
gi|193892360|gb|EDV91226.1| GH15257 [Drosophila grimshawi]
Length = 805
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 159/306 (51%), Gaps = 10/306 (3%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL +IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 368 RSRLLEDFRNQRFPNLQLRDLTNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFNEILGA 427
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
LM D FGNYV+QK E + EQ+ + + + QL L +G R + K LE++
Sbjct: 428 AYSLMTDVFGNYVIQKFFEFGTPEQKNNLGMQVKGHVLQL---ALQMYGCRVIQKALESI 484
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
+ P Q ++ L + KD NG++V+Q C++ ++++N Y ++T
Sbjct: 485 S-PDQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFVINAFKGQVYSLSTHP 543
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L + + L+
Sbjct: 544 YGCRVIQRILEHCTAEQTTPILDELHEHTENLIQDQYGNYVIQHVLEHGKQEDKSILINS 603
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQS 428
+ G + S +K+ SNVVE+C+ + + T +I E+ + +++ + NYV+Q
Sbjct: 604 VRGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK 663
Query: 429 ALLVSK 434
+ VS+
Sbjct: 664 MIDVSE 669
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 125/243 (51%), Gaps = 12/243 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+++ LA YGCR +Q+ + S+ ++ + I E+ V + + D GN+VVQK +E
Sbjct: 460 VKGHVLQLALQMYGCRVIQKALESISPDQQQEIVHELDGHVLKCVKDQNGNHVVQKCIE- 518
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + + L + F+ L+TH G R + ++LE+ T +Q + +L L
Sbjct: 519 CVDP----VALQFVINAFKGQVYSLSTHPYGCRVIQRILEHCTA-EQTTPILDELHEHTE 573
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED L+N V ++ K V++ CV ++ +R
Sbjct: 574 NLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGER 633
Query: 329 ERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H + YG
Sbjct: 634 TGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYG 693
Query: 385 SNV 387
++
Sbjct: 694 KHI 696
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 60/130 (46%)
Query: 158 LAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRT 217
L +DQYG +Q + +E+ ++ V +V L F + VV+K V + +RT
Sbjct: 575 LIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERT 634
Query: 218 RILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGH 277
++ + + + + + V++ + +++ P Q+ ++ +RP L K T G
Sbjct: 635 GLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYGK 694
Query: 278 YVIQYCVKHF 287
++ K++
Sbjct: 695 HINAKLEKYY 704
>gi|409046090|gb|EKM55570.1| hypothetical protein PHACADRAFT_95334 [Phanerochaete carnosa
HHB-10118-sp]
Length = 372
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 161/295 (54%), Gaps = 15/295 (5%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI-DRVCELMIDPFGNYVVQ 205
+L+D+ G++V + DQ+G R +Q+ + + +EE ++IF E++ +L+ D FGNYVVQ
Sbjct: 37 TLKDIYGHVVEFSMDQHGSRFIQQKIETADEEEKQIIFDEIMPHHALKLIQDVFGNYVVQ 96
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
K E +E Q + L+ + ++ + L +G R V K +E++ QQ + V L
Sbjct: 97 KFFEHGNELQTS---LLAKTMEGHILPLSLQMYGCRVVQKAIEHMPAEQQSAFV-DELAG 152
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
+ KD NG++VIQ ++ E ++ C +AT GC VLQ C E
Sbjct: 153 DVLRCVKDANGNHVIQRLIESVPPERLTFIAAFQGHVC-DLATHPYGCRVLQRCFENLPE 211
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
Q L++E+ +AL L +D +GNYV+Q +L PQ AS++ +L G + S +K+ S
Sbjct: 212 HQTRVLLSEVQEHALQLMQDQFGNYVIQFVLEHGQPQDRASIVSKLHGQMLHMSRHKFAS 271
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPN-------VSMLLMHPFGNYVIQSALLVS 433
NVVE+ L+ E S R +IE + +P VSM + F NYV+Q AL+V+
Sbjct: 272 NVVEKALV-MAEPSSRRALIEEVMAPRPDGPNPFVSM-MKDQFANYVLQRALMVA 324
>gi|361128047|gb|EHK99999.1| putative Pumilio like protein [Glarea lozoyensis 74030]
Length = 447
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 153/288 (53%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ ++V + DQ+G R +Q+ + + +E E +F E+ +LM D FGNYV+QKL
Sbjct: 45 LKDIYNHVVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKL 104
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + N ++ + + +G R V K LE++ QQ LV LR
Sbjct: 105 FEHGNQIQKRVLAEQMKN---HVMELSMQMYGCRVVQKALEHVLADQQAELV-EELRSDV 160
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q ++ E +++++ + +AT GC V+Q +EY K
Sbjct: 161 LKCVKDQNGNHVVQKAIERVPTEHIQFVIDAFRGQVHVLATHPYGCRVIQRILEYCKPHD 220
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ ++ E+ A +L D YGNYV QH++ P+ A +++ + ++ S +K+ SNV
Sbjct: 221 QAVVLEELHQCASMLITDQYGNYVTQHVIQHGKPEDRAKIIKIITAQLLTLSKHKFASNV 280
Query: 388 VERCLLESGEEQSTRIIIELLR-----SPNVSMLLMHPFGNYVIQSAL 430
VE+ + EQ I+ +L S + +++ +GNYVIQ L
Sbjct: 281 VEKSIQFGTSEQRKAIVAQLTAMHSDGSSPLQLMMKDQYGNYVIQKLL 328
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S + +Y L ++ ++ + D+ G +Q +E + ++E+L EI NAL L D +
Sbjct: 37 SKSNKRYELKDIYNHVVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVF 96
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYV+Q L L Q++ H + S YG VV++ L +Q ++E
Sbjct: 97 GNYVIQKLFEHGNQIQKRVLAEQMKNHVMELSMQMYGCRVVQKALEHVLADQQAE-LVEE 155
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
LRS +V + GN+V+Q A+
Sbjct: 156 LRS-DVLKCVKDQNGNHVVQKAI 177
>gi|162312380|ref|NP_593141.2| RNA-binding protein Puf3 (predicted) [Schizosaccharomyces pombe
972h-]
gi|229891786|sp|O94462.4|PUF3_SCHPO RecName: Full=mRNA-binding protein puf3; AltName: Full=Pumilio
homology domain family member 3
gi|159883910|emb|CAA22616.2| RNA-binding protein Puf3 (predicted) [Schizosaccharomyces pombe]
Length = 732
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 158/292 (54%), Gaps = 11/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVC-ELMIDPFGNYVVQK 206
L D+ GN+V + DQ+G R +Q+ +++ +EE E +F E+ C +LM+D FGNYVVQK
Sbjct: 394 LSDILGNVVLFSTDQHGSRFIQQKLATATEEEREAVFQEIASTSCLQLMMDIFGNYVVQK 453
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E +E+Q+ +L + F L L +G R V K +E ++ Q+ L+ L
Sbjct: 454 YFEFGNEKQKQILLSQIKGHVFSL---SLQMYGCRVVQKAIEYISPEHQVQLI-QELDGH 509
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ D NG++VIQ ++ +++L + + ++ GC V+Q +E+ +
Sbjct: 510 VLDCVCDQNGNHVIQKAIECIDTGHLQFILRALRPQIHVLSAHPYGCRVIQRAIEHCH-S 568
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+R+ ++ E++ + L L +D YGNYVVQH+L + + H + SC+K+ SN
Sbjct: 569 ERKLIIEELLPHILKLTQDQYGNYVVQHILRTGSESDKKYIFDLMIDHLLFLSCHKFASN 628
Query: 387 VVERCLLESGEEQSTRIIIELL--RSPNVSMLLM---HPFGNYVIQSALLVS 433
VVERC+ + RI+ +++ ++ N S+L++ + NYVIQ L S
Sbjct: 629 VVERCISYISDVDRRRILNKIISEKAENCSILMLMMKDKYANYVIQKLLDAS 680
>gi|297265504|ref|XP_001095426.2| PREDICTED: pumilio homolog 2-like isoform 1 [Macaca mulatta]
Length = 986
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 163/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 629 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 688
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 689 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 745
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ Q +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 746 SSDMQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 804
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 805 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 864
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 865 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 924
Query: 426 IQSAL 430
+Q +
Sbjct: 925 VQKMI 929
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 132/271 (48%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ + + E+
Sbjct: 699 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDMQSEMVKELD 758
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 759 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 813
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 814 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 872
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ + + +D Y NYVVQ ++ +
Sbjct: 873 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMA 932
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 933 EPAQRKIIMHKIRPHITTLRKYTYGKHILAK 963
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 793 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 852
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 853 GRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSA 911
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 912 LYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 968
>gi|440800301|gb|ELR21340.1| Pumiliofamily RNA binding repeat domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 1039
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 162/312 (51%), Gaps = 35/312 (11%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
+L+D+ G+IV + DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK
Sbjct: 708 TLQDIIGHIVEFSGDQHGSRFIQQQLEEASPAEKQMVFKEILPSALRLMTDVFGNYVIQK 767
Query: 207 LVELCSEEQRTRILLMLTNDDF--QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
E + EQ + + D+ ++ + + +G R + K LE ++ QQ V+ L
Sbjct: 768 FFEHGTPEQ-----IKILGDELIGNVLALSMQMYGCRVIQKALEVISVEQQ-EKVVKELE 821
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+ KD NG++VIQ C++ ++++ Y +AT GC V+Q +EY
Sbjct: 822 GNIMKCVKDQNGNHVIQKCIEKVPSPLIQFIV-------YHLATHPYGCRVIQRILEYCT 874
Query: 325 GAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
Q ++ E++ + L +D YGNYV+QH+L PQ A +L +L G + S +K+
Sbjct: 875 EEQTTPILDELLRCTISLVQDQYGNYVIQHVLEHGKPQDKAPILHKLRGQLLQLSQHKFA 934
Query: 385 SNVVERCLL----ESGEEQSTRIIIE---LLRSPNVS---MLLMHPFGNYVIQSAL---- 430
SNVVE+C+ G+E +++IE LR+ + +++ + NYVIQ L
Sbjct: 935 SNVVEKCIQCAFGPYGDESDRQMVIEEILQLRNDGATPLQIMMKDQYANYVIQKLLDVVN 994
Query: 431 ------LVSKVR 436
L++K+R
Sbjct: 995 ENQRDQLITKIR 1006
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 23/226 (10%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+++L GNI+ KDQ G +Q+ + +P I+ I V L P+G V+Q++
Sbjct: 817 VKELEGNIMKCVKDQNGNHVIQKCIEKVPSPLIQFI-------VYHLATHPYGCRVIQRI 869
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E C+EEQ T IL L LV+ + +G + +LE+ PQ + +L LR
Sbjct: 870 LEYCTEEQTTPILDELLRCTISLVQ---DQYGNYVIQHVLEH-GKPQDKAPILHKLRGQL 925
Query: 268 VTLTKDTNGHYVIQYCV------------KHFSHEDTKYLLNEVADNCYGIATDKSGCCV 315
+ L++ V++ C+ + E+ L N+ A + D+ V
Sbjct: 926 LQLSQHKFASNVVEKCIQCAFGPYGDESDRQMVIEEILQLRNDGATPLQIMMKDQYANYV 985
Query: 316 LQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP 361
+Q ++ QR++L+ +I + L + YG +++ L + P
Sbjct: 986 IQKLLDVVNENQRDQLITKIRPHVPALKKYTYGKHIINRLEKMGSP 1031
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 289 HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYG 348
+++ K+ L ++ + + D+ G +Q +E + A+++ + EI+ +AL L D +G
Sbjct: 702 NKNRKFTLQDIIGHIVEFSGDQHGSRFIQQQLEEASPAEKQMVFKEILPSALRLMTDVFG 761
Query: 349 NYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL 408
NYV+Q P+ L +L G+ ++ S YG V+++ L EQ +++ EL
Sbjct: 762 NYVIQKFFEHGTPEQIKILGDELIGNVLALSMQMYGCRVIQKALEVISVEQQEKVVKEL- 820
Query: 409 RSPNVSMLLMHPFGNYVIQ 427
N+ + GN+VIQ
Sbjct: 821 -EGNIMKCVKDQNGNHVIQ 838
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 9/185 (4%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE N + L + V + D +G IQ ++ S + + + E+ +
Sbjct: 695 LLEEFRNNKNRKFTLQDIIGHIVEFSGDQHGSRFIQQQLEEASPAEKQMVFKEILPSALR 754
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q E+ Q + L E+I N L L+ YG V+Q L + +
Sbjct: 755 LMTDVFGNYVIQKFFEHGTPEQIKILGDELIGNVLALSMQMYGCRVIQKALEVISVEQQE 814
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++++LEG+ + ++ G++V+++C+ E+ +I+ + V L HP+G V
Sbjct: 815 KVVKELEGNIMKCVKDQNGNHVIQKCI-----EKVPSPLIQFI----VYHLATHPYGCRV 865
Query: 426 IQSAL 430
IQ L
Sbjct: 866 IQRIL 870
>gi|414587978|tpg|DAA38549.1| TPA: hypothetical protein ZEAMMB73_234832 [Zea mays]
Length = 764
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 153/289 (52%), Gaps = 6/289 (2%)
Query: 144 DCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYV 203
D L D+ G++ ++ DQYG R +Q+ + ++ E IF E++ V L D FGNYV
Sbjct: 411 DSVELIDVVGHVKEVSMDQYGSRFIQQKLEIASPDDREKIFPEILSNVIVLTTDVFGNYV 470
Query: 204 VQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL 263
+QK E +E Q ++ L +++ + L +G R V K+LE + Q++ +V L
Sbjct: 471 IQKFFEFATESQLIQLADQLKG---RILELSLQMYGCRVVQKVLEVVGMDQKVDIV-HEL 526
Query: 264 RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
+ + D NG++VIQ C++ + ++++ + + T + GC V+Q +E+
Sbjct: 527 KNYILKCIGDQNGNHVIQKCIECVPEDRIPFVIDPILSQILVLCTHQYGCRVIQRVLEHC 586
Query: 324 KG-AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ ++ EI+ L +D +GNYVVQH+L P+ + ++++L G V+ S K
Sbjct: 587 HDPVTQSAIMNEIMQQTFHLTDDKFGNYVVQHVLEHGKPEERSVIIQKLSGQVVTLSKQK 646
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHP-FGNYVIQSAL 430
+ SNV+E+CL E+ +I E++ S LM FGNYV+Q L
Sbjct: 647 FASNVIEKCLEFGTPEERDSLIGEIISSGQTFQELMKDQFGNYVVQKVL 695
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 132/255 (51%), Gaps = 8/255 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L+G I+ L+ YGCR +Q+ + + ++ I E+ + + + + D GN+V+QK +E
Sbjct: 490 LKGRILELSLQMYGCRVVQKVLEVVGMDQKVDIVHELKNYILKCIGDQNGNHVIQKCIEC 549
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E+ RI ++ Q++ +C + +G R + ++LE+ +P S ++ + L
Sbjct: 550 VPED---RIPFVIDPILSQILVLCTHQYGCRVIQRVLEHCHDPVTQSAIMNEIMQQTFHL 606
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
T D G+YV+Q+ ++H E+ ++ +++ ++ K V++ C+E+ +R+
Sbjct: 607 TDDKFGNYVVQHVLEHGKPEERSVIIQKLSGQVVTLSKQKFASNVIEKCLEFGTPEERDS 666
Query: 331 LVAEIIANALLLAE---DCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
L+ EII++ E D +GNYVVQ +L + +L ++ H YG ++
Sbjct: 667 LIGEIISSGQTFQELMKDQFGNYVVQKVLETCDDKYLEMILSSIKLHLNELKNYTYGKHI 726
Query: 388 VERC--LLESGEEQS 400
V R L+ +GE ++
Sbjct: 727 VARVEKLIVTGENRA 741
>gi|303391583|ref|XP_003074021.1| Puf RNA-binding protein [Encephalitozoon intestinalis ATCC 50506]
gi|303303170|gb|ADM12661.1| Puf RNA-binding protein [Encephalitozoon intestinalis ATCC 50506]
Length = 528
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 156/277 (56%), Gaps = 14/277 (5%)
Query: 156 VALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQ 215
+ ++KDQ G R +QR M S+ +EEI F +++ EL + FGNYVVQK++ L +E +
Sbjct: 221 INVSKDQEGSRCIQRKMDSISREEISWFFNNIVEAASELSANLFGNYVVQKIIPLLTEGE 280
Query: 216 RTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTN 275
RT ++ L Q+ + ++ +G R V KL++ ++ + +L ++ + L +D N
Sbjct: 281 RTILITKLVG---QIHLLSVHPYGCRVVQKLVDVSSD---VDFILEEVKGNLLELIEDQN 334
Query: 276 GHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEI 335
G++VIQ C++ +D K +L + ++N +AT K GC V+Q +E+ K + + +V +
Sbjct: 335 GNHVIQKCIEKC--KDRKIILQQFSENSLFLATHKYGCRVIQRMLEFCKKDEIKGIVEVL 392
Query: 336 IANALLLAEDCYGNYVVQHLLAL-RVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLE 394
I N L +D YGNYV+QH+LA+ + + + R +E Y C K+ SNVVE+C+
Sbjct: 393 IGNIKTLVDDQYGNYVIQHILAVGKEEERNLVIERIIEKSYELSKC-KFSSNVVEQCVKL 451
Query: 395 SGEEQSTRIIIELLR----SPNVSMLLMHPFGNYVIQ 427
S Q + + + L P + + +GNYV+Q
Sbjct: 452 SNNGQREQFLEKFLEPVGGKPGMYSMCTDMYGNYVVQ 488
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G I L+ YGCR +Q+ + +++ I EV + EL+ D GN+V+QK +E
Sbjct: 288 LVGQIHLLSVHPYGCRVVQKLVDV--SSDVDFILEEVKGNLLELIEDQNGNHVIQKCIEK 345
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
C + R IL + + L + +G R + ++LE +I ++ L TL
Sbjct: 346 CKD--RKIILQQFSENSLFL---ATHKYGCRVIQRMLE-FCKKDEIKGIVEVLIGNIKTL 399
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
D G+YVIQ+ + E+ ++ + + Y ++ K V++ CV+ S QRE+
Sbjct: 400 VDDQYGNYVIQHILAVGKEEERNLVIERIIEKSYELSKCKFSSNVVEQCVKLSNNGQREQ 459
Query: 331 LVAEIIA------NALLLAEDCYGNYVVQHL 355
+ + + + D YGNYVVQ L
Sbjct: 460 FLEKFLEPVGGKPGMYSMCTDMYGNYVVQRL 490
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 230 LVRICLNT----HGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVK 285
+ IC+N G R + + +++++ ++IS + A L+ + G+YV+Q +
Sbjct: 216 MKEICINVSKDQEGSRCIQRKMDSISR-EEISWFFNNIVEAASELSANLFGNYVVQKIIP 274
Query: 286 HFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAED 345
+ + L+ ++ + ++ GC V+Q V+ S + + ++ E+ N L L ED
Sbjct: 275 LLTEGERTILITKLVGQIHLLSVHPYGCRVVQKLVDVS--SDVDFILEEVKGNLLELIED 332
Query: 346 CYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIII 405
GN+V+Q + + +L+Q + + + +KYG V++R +LE ++ + I+
Sbjct: 333 QNGNHVIQK--CIEKCKDRKIILQQFSENSLFLATHKYGCRVIQR-MLEFCKKDEIKGIV 389
Query: 406 ELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
E+L N+ L+ +GNYVIQ L V K
Sbjct: 390 EVLIG-NIKTLVDDQYGNYVIQHILAVGK 417
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+ N + LA +YGCR +QR + K+EI+ I +I + L+ D +GNYV+Q +
Sbjct: 353 LQQFSENSLFLATHKYGCRVIQRMLEFCKKDEIKGIVEVLIGNIKTLVDDQYGNYVIQHI 412
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL--RP 265
+ + EE+R ++ + ++L + +++ + +KL N Q + L + +P
Sbjct: 413 LAVGKEEERNLVIERIIEKSYELSKCKFSSNVVEQCVKLSNNGQREQFLEKFLEPVGGKP 472
Query: 266 GAVTLTKDTNGHYVIQ 281
G ++ D G+YV+Q
Sbjct: 473 GMYSMCTDMYGNYVVQ 488
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 4/140 (2%)
Query: 297 NEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLL 356
N + + C ++ D+ G +Q ++ + I+ A L+ + +GNYVVQ ++
Sbjct: 214 NTMKEICINVSKDQEGSRCIQRKMDSISREEISWFFNNIVEAASELSANLFGNYVVQKII 273
Query: 357 ALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSML 416
L L+ +L G S + YG VV++ + S + I+E ++ N+ L
Sbjct: 274 PLLTEGERTILITKLVGQIHLLSVHPYGCRVVQKLVDVSSD---VDFILEEVKG-NLLEL 329
Query: 417 LMHPFGNYVIQSALLVSKVR 436
+ GN+VIQ + K R
Sbjct: 330 IEDQNGNHVIQKCIEKCKDR 349
>gi|262411024|gb|ACY66878.1| P30Sh115J16 [Saccharum hybrid cultivar R570]
Length = 764
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 150/288 (52%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G IV + DQ+G R +Q+ + + EE +F EV+ LM D FGNYV+QK
Sbjct: 433 LSDITGRIVEYSADQHGSRFIQQKLENCTAEEKASVFAEVLPHASSLMTDVFGNYVIQKF 492
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQR + L ++ + L +G R + K LE + Q+I LV L
Sbjct: 493 FEHGTREQRRDLATKLVG---HVLPLSLQMYGCRVIQKALEVMELDQKIDLV-HELDGHV 548
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG-A 326
+ +D NG++VIQ C++ E ++++ ++ GC V+Q +E+ G +
Sbjct: 549 MRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVASLSMHPYGCRVIQRVLEHCGGNS 608
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q + ++ EI+ +A +LA+D YGNYV QH+L + ++ +L G V+ S NK+ SN
Sbjct: 609 QGQCIIDEILQSACILAQDQYGNYVTQHVLERGKAHERSQIITKLAGQVVTMSQNKFASN 668
Query: 387 VVERCLLESGEEQSTRIIIELLR----SPNVSMLLMHPFGNYVIQSAL 430
V+E+C + +I +++ + N+ ++ + NYV+Q L
Sbjct: 669 VIEKCFQHGDIAERDLLIRQIVEQTEANDNLLAMMKDQYANYVVQKIL 716
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 120/246 (48%), Gaps = 9/246 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G+++ L+ YGCR +Q+ + + ++ + E+ V + D GN+V+QK +E
Sbjct: 508 LVGHVLPLSLQMYGCRVIQKALEVMELDQKIDLVHELDGHVMRCVRDQNGNHVIQKCIEC 567
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E I +++ Q+ + ++ +G R + ++LE+ Q ++ + A L
Sbjct: 568 VPTE---HIGFVVSAFQGQVASLSMHPYGCRVIQRVLEHCGGNSQGQCIIDEILQSACIL 624
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YV Q+ ++ + ++ ++A ++ +K V++ C ++ A+R+
Sbjct: 625 AQDQYGNYVTQHVLERGKAHERSQIITKLAGQVVTMSQNKFASNVIEKCFQHGDIAERDL 684
Query: 331 LVAEIIA------NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ +I+ N L + +D Y NYVVQ +L LL +++GH + YG
Sbjct: 685 LIRQIVEQTEANDNLLAMMKDQYANYVVQKILETCNENQRELLLSRVKGHMQALRKYTYG 744
Query: 385 SNVVER 390
++V R
Sbjct: 745 KHIVSR 750
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 107/230 (46%), Gaps = 7/230 (3%)
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L EL S R L +T ++V + HG R + + LEN T ++ S V A + P
Sbjct: 420 LEELKSNRARRVELSDITG---RIVEYSADQHGSRFIQQKLENCTAEEKAS-VFAEVLPH 475
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
A +L D G+YVIQ +H + E + L ++ + ++ GC V+Q +E +
Sbjct: 476 ASSLMTDVFGNYVIQKFFEHGTREQRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELD 535
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q+ LV E+ + + D GN+V+Q + + ++ +G S S + YG
Sbjct: 536 QKIDLVHELDGHVMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVASLSMHPYGCR 595
Query: 387 VVERCLLE-SGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKV 435
V++R L G Q II E+L+S +L +GNYV Q L K
Sbjct: 596 VIQRVLEHCGGNSQGQCIIDEILQS--ACILAQDQYGNYVTQHVLERGKA 643
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 98/220 (44%), Gaps = 15/220 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ +L G+++ +DQ G +Q+ + +P E I + +V L + P+G V+Q++
Sbjct: 541 VHELDGHVMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVASLSMHPYGCRVIQRV 600
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICL---NTHGIRAVLKLLENLTNPQQISLVLAALR 264
+E C + + ++ D L C+ + +G +LE + S ++ L
Sbjct: 601 LEHCGGNSQGQCII-----DEILQSACILAQDQYGNYVTQHVLER-GKAHERSQIITKLA 654
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVA------DNCYGIATDKSGCCVLQH 318
VT++++ VI+ C +H + L+ ++ DN + D+ V+Q
Sbjct: 655 GQVVTMSQNKFASNVIEKCFQHGDIAERDLLIRQIVEQTEANDNLLAMMKDQYANYVVQK 714
Query: 319 CVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLAL 358
+E QRE L++ + + L + YG ++V + L
Sbjct: 715 ILETCNENQRELLLSRVKGHMQALRKYTYGKHIVSRVEQL 754
>gi|339246841|ref|XP_003375054.1| pumilio protein [Trichinella spiralis]
gi|316971694|gb|EFV55440.1| pumilio protein [Trichinella spiralis]
Length = 369
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 167/311 (53%), Gaps = 13/311 (4%)
Query: 124 RNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMI 183
R+Q S S + + F LRD+ ++V A+DQYG R +Q+ + ++ +M+
Sbjct: 17 RDQGSSHRSRLLEDFRNNRFPTLQLRDVTNHVVEFAQDQYGSRFIQQKLERANMQDRQMV 76
Query: 184 FVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAV 243
F E+I+ LM D FGNYV+QK E + EQ+ + +L + ++ + L +G R +
Sbjct: 77 FSEIIESAQMLMTDVFGNYVIQKFFEFGTVEQKNELARVLRPN---VLALALQMYGCRVI 133
Query: 244 LKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNC 303
K LE + + QQ +V L + KD NG++VIQ ++ + +++++ D
Sbjct: 134 QKCLEAVDHEQQREIV-KELEGNILKCVKDQNGNHVIQKIIETVDPKSLQFVIDAFKDQV 192
Query: 304 YGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQI 363
+ ++T GC V+Q +E+ Q++ ++ E+ + L D YGNYV+QH+L +
Sbjct: 193 FALSTHSYGCRVIQRILEHCMMEQKKPILEELHQHIKSLVCDQYGNYVIQHVLEHGQAED 252
Query: 364 TASLLRQLEGHYVSFSCNKYGSNVVERCL-LESGEEQSTRIIIELLRSPNVSMLLMHPFG 422
+ +++++ + +S +K+ SNVVE+C+ + EE++ II+ V+M + +
Sbjct: 253 KSRIIKEMREEILRYSQHKFASNVVEKCVCFATAEERNCLIIL-------VAM-MKDQYA 304
Query: 423 NYVIQSALLVS 433
NYV+Q L V+
Sbjct: 305 NYVVQKLLDVA 315
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 96/230 (41%), Gaps = 40/230 (17%)
Query: 87 PCQEAEPINQDSSILNLLHNHNFDGLR-SNGNELSSVPRNQWMSSLSLKRNQWLQDSFDC 145
C EA Q I+ L + ++ NGN + + + ++ K Q++ D+F
Sbjct: 135 KCLEAVDHEQQREIVKELEGNILKCVKDQNGNHVIQ----KIIETVDPKSLQFVIDAF-- 188
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+ + AL+ YGCR +QR + E+ + I E+ + L+ D +GNYV+Q
Sbjct: 189 ------KDQVFALSTHSYGCRVIQRILEHCMMEQKKPILEELHQHIKSLVCDQYGNYVIQ 242
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVR-----------ICLNTHGIR------------- 241
++E E ++RI+ + + + + +C T R
Sbjct: 243 HVLEHGQAEDKSRIIKEMREEILRYSQHKFASNVVEKCVCFATAEERNCLIILVAMMKDQ 302
Query: 242 ---AVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFS 288
V++ L ++ +P Q ++ +RP L + T G +++ K+F
Sbjct: 303 YANYVVQKLLDVADPSQRKRLMQNIRPHVPQLRRFTYGKHILSKLEKYFQ 352
>gi|228312515|pdb|3H3D|X Chain X, Drosophila Pumilio Rna Binding Domain (Puf Domain)
gi|228312516|pdb|3H3D|Y Chain Y, Drosophila Pumilio Rna Binding Domain (Puf Domain)
Length = 323
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 153/289 (52%), Gaps = 6/289 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK
Sbjct: 21 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 80
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+ + + + QL L +G R + K LE+++ P+Q ++ L
Sbjct: 81 FEFGTPEQKNTLGMQVKGHVLQL---ALQMYGCRVIQKALESIS-PEQQQEIVHELDGHV 136
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++N Y ++T GC V+Q +E+ Q
Sbjct: 137 LKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQ 196
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L + + L+ + G + S +K+ SNV
Sbjct: 197 TTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNV 256
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+C+ + + T +I E+ + +++ + NYV+Q + VS+
Sbjct: 257 VEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSE 305
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 119/227 (52%), Gaps = 12/227 (5%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +E
Sbjct: 96 VKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIE- 154
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + + L + F+ L+TH G R + ++LE+ T +Q + +L L
Sbjct: 155 CVDP----VALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCT-AEQTTPILDELHEHTE 209
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED L+N V ++ K V++ CV ++ +R
Sbjct: 210 QLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGER 269
Query: 329 ERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQL 371
L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++
Sbjct: 270 TGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKI 316
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + + + +E+ Y
Sbjct: 6 RLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAY 65
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q+ L ++ + L LA YG V+Q L P+
Sbjct: 66 SLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQ 125
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++ +L+GH + ++ G++VV++C +E + + + II + V L HP+G
Sbjct: 126 QEIVHELDGHVLKCVKDQNGNHVVQKC-IECVDPVALQFIINAFKG-QVYSLSTHPYGCR 183
Query: 425 VIQSAL 430
VIQ L
Sbjct: 184 VIQRIL 189
>gi|378756380|gb|EHY66404.1| hypothetical protein NERG_00044 [Nematocida sp. 1 ERTm2]
Length = 461
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 181/337 (53%), Gaps = 27/337 (8%)
Query: 111 GLRSNGNE---LSSVPRNQWMSSLSLK--RNQWLQDSFDCSSLRDLRGN---IVALAKDQ 162
GL+ G L+S+ + + S+ + + ++Q+ ++ + + R + + I A++KDQ
Sbjct: 96 GLKEKGKRHILLNSIKIDSFSSTPAAEPLKDQFFEEVYAFAKKRGISSSENLICAISKDQ 155
Query: 163 YGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLM 222
G R +Q+ + EEI M F E+ + +L+ D FGNYVVQK +E+ + EQR +I
Sbjct: 156 EGSRFIQKKLDGASAEEIAMTFEEICPWIGDLIADLFGNYVVQKFLEIGTHEQREKIFSA 215
Query: 223 LTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQY 282
+ ++ + L+ +G R + K LE ++I + ++ + L D NG++V+Q
Sbjct: 216 MEG---TIIPLALHMYGCRVIQKALECKDINRKI---VERIKGHVIDLVCDQNGNHVVQK 269
Query: 283 CVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLL 342
CV+ D+ +++ E ++ ++ + GC V+Q E S + + +II+NA LL
Sbjct: 270 CVECV---DSDFVIKEFEEDAVSLSRHRYGCRVIQRIFENS--TKCASAIDKIISNAKLL 324
Query: 343 AEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTR 402
ED YGNYV+QH+L ++ L + +S +K+ SNV+E+C++ G + +
Sbjct: 325 VEDQYGNYVIQHILEKGTHAHKRKIITDLSDNIAEYSTHKFASNVMEKCVI-CGTMEDRK 383
Query: 403 IIIELLRS---PNVSMLLMH----PFGNYVIQSALLV 432
+++ L+S P+ +L+H FGNYVIQ L V
Sbjct: 384 HMLKQLKSAVGPSGEDMLIHITMDKFGNYVIQRLLDV 420
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 121/259 (46%), Gaps = 24/259 (9%)
Query: 151 LRGNIVALAKDQYGCRHLQRTM--SSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ G I+ LA YGCR +Q+ + + ++ +E I VID VC D GN+VVQK V
Sbjct: 216 MEGTIIPLALHMYGCRVIQKALECKDINRKIVERIKGHVIDLVC----DQNGNHVVQKCV 271
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
E + ++ D L R + +G R + ++ EN T + + + + A
Sbjct: 272 ECVDSD---FVIKEFEEDAVSLSR---HRYGCRVIQRIFENST---KCASAIDKIISNAK 322
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++ +H + ++ +++DN +T K V++ CV R
Sbjct: 323 LLVEDQYGNYVIQHILEKGTHAHKRKIITDLSDNIAEYSTHKFASNVMEKCVICGTMEDR 382
Query: 329 ERLVAEIIANA--------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSC 380
+ ++ ++ + + + D +GNYV+Q LL + L+ L+ +
Sbjct: 383 KHMLKQLKSAVGPSGEDMLIHITMDKFGNYVIQRLLDVLTGADKEVLMAHLKANISDLKK 442
Query: 381 NKYGSNVVER-CLLESGEE 398
+ Y ++ + LL+S E
Sbjct: 443 SSYAKCIISKLALLDSKRE 461
>gi|384490402|gb|EIE81624.1| hypothetical protein RO3G_06329 [Rhizopus delemar RA 99-880]
Length = 492
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 126/225 (56%), Gaps = 23/225 (10%)
Query: 226 DDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP-------------------- 265
DD L IC + +G R + K LE T+ QQ ++ + P
Sbjct: 238 DDIYL--ICKDQNGCRYLQKKLEE-TDLQQREVIFNQVYPHFVELMTGKYLQNNLDEQVR 294
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
+ TL KD NG++VIQ C+ F+ + +++ + V++NC +AT + GCCVLQ C++YS
Sbjct: 295 SSFTLIKDINGNHVIQKCLHRFTTKHKQFIYDAVSENCIEVATHRHGCCVLQRCIDYSAN 354
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
Q ++LV EII +AL L +D YGNYVVQ++L L Q + L+RQ G+ S KY S
Sbjct: 355 NQTKQLVDEIINHALTLVQDPYGNYVVQYVLELGDAQFSNRLIRQFIGNLSKLSTQKYSS 414
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
NV+E+C+ + E+ ++ E++ + LL + NYV+Q+AL
Sbjct: 415 NVMEKCIRVAEEDTRHDLVQEMMNKDRLEKLLKDSYANYVVQTAL 459
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 73/155 (47%), Gaps = 22/155 (14%)
Query: 296 LNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEI-------------------- 335
L ++ D+ Y I D++GC LQ +E + QRE + ++
Sbjct: 233 LEDMKDDIYLICKDQNGCRYLQKKLEETDLQQREVIFNQVYPHFVELMTGKYLQNNLDEQ 292
Query: 336 IANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLES 395
+ ++ L +D GN+V+Q L + + + + + + +++G V++RC+ S
Sbjct: 293 VRSSFTLIKDINGNHVIQKCLHRFTTKHKQFIYDAVSENCIEVATHRHGCCVLQRCIDYS 352
Query: 396 GEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
Q+ +++ E++ + L+ P+GNYV+Q L
Sbjct: 353 ANNQTKQLVDEIIN--HALTLVQDPYGNYVVQYVL 385
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSE 213
N + +A ++GC LQR + + + + E+I+ L+ DP+GNYVVQ ++EL
Sbjct: 331 NCIEVATHRHGCCVLQRCIDYSANNQTKQLVDEIINHALTLVQDPYGNYVVQYVLELGDA 390
Query: 214 EQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKD 273
+ R++ + +L +++ + +++ E T + ++ R L KD
Sbjct: 391 QFSNRLIRQFIGNLSKLSTQKYSSNVMEKCIRVAEEDTRHDLVQEMMNKDR--LEKLLKD 448
Query: 274 TNGHYVIQYCVKHFSHEDTKYL 295
+ +YV+Q + + S + L
Sbjct: 449 SYANYVVQTALDYASESQHRQL 470
>gi|262118746|pdb|3K49|A Chain A, Puf3 Rna Binding Domain Bound To Cox17 Rna 3' Utr
Recognition Sequence Site B
gi|262118748|pdb|3K49|C Chain C, Puf3 Rna Binding Domain Bound To Cox17 Rna 3' Utr
Recognition Sequence Site B
gi|262118750|pdb|3K49|E Chain E, Puf3 Rna Binding Domain Bound To Cox17 Rna 3' Utr
Recognition Sequence Site B
gi|262118752|pdb|3K4E|A Chain A, Puf3 Rna Binding Domain Bound To Cox17 Rna 3' Utr
Recognition Sequence Site A
gi|262118754|pdb|3K4E|C Chain C, Puf3 Rna Binding Domain Bound To Cox17 Rna 3' Utr
Recognition Sequence Site A
gi|262118756|pdb|3K4E|E Chain E, Puf3 Rna Binding Domain Bound To Cox17 Rna 3' Utr
Recognition Sequence Site A
Length = 369
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 163/306 (53%), Gaps = 25/306 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+ + KDQ+G R +QR +++ P E E+IF E+ D EL D FGNYV+QK
Sbjct: 26 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 85
Query: 208 VELCSEEQRTRILLMLTNDDFQ--LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
E S+ Q+ ++ D F+ + ++ L + R + K LE + + Q+I LVL L
Sbjct: 86 FEFGSKIQKNTLV-----DQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVL-ELSD 139
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
+ + KD NG++VIQ ++ E ++L+ + + Y ++T GC V+Q +E+
Sbjct: 140 SVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSS 199
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLA------LRVPQITASLLRQLEGHYVSFS 379
+E ++ E+ L +D YGNYV+Q++L + I ++ + + V +S
Sbjct: 200 EDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANNVVEYS 259
Query: 380 CNKYGSNVVERCLLESGEEQSTRIIIELL-RSPNVS--------MLLM--HPFGNYVIQS 428
+K+ SNVVE+ +L + Q II ++L R N + M+LM F NYVIQ
Sbjct: 260 KHKFASNVVEKSILYGSKNQKDLIISKILPRDKNHALNLEDDSPMILMIKDQFANYVIQK 319
Query: 429 ALLVSK 434
+ VS+
Sbjct: 320 LVNVSE 325
>gi|222628370|gb|EEE60502.1| hypothetical protein OsJ_13800 [Oryza sativa Japonica Group]
Length = 750
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 148/275 (53%), Gaps = 6/275 (2%)
Query: 158 LAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRT 217
L+ DQ+G R +Q+ + ++ E IF E++ L D FGNYV+QK E +E Q +
Sbjct: 411 LSMDQFGSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFATESQLS 470
Query: 218 RILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGH 277
++ L QL +G R V K+++ + ++IS+V L+ + D NG+
Sbjct: 471 QLADQLRGHFLQL---SFQMYGCRVVQKVIDVVDLERKISIV-GELKNSVLRCISDQNGN 526
Query: 278 YVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG-AQRERLVAEII 336
+VIQ C++ + +++ ++ Y + T + GC V+Q +E+ A + ++ EI+
Sbjct: 527 HVIQKCIECVPEDHIPFVIEDILQKIYPLCTHQYGCRVIQRVLEHCHNPATQSAVMDEIV 586
Query: 337 ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESG 396
A L ED +GNYVVQH+L P+ +S++++L G V+ S KY SNVVE+CL
Sbjct: 587 ERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEKCLSFGT 646
Query: 397 EEQSTRIIIELLRSPNVSMLLMHP-FGNYVIQSAL 430
++ +I E++ S LM FGNYV+Q L
Sbjct: 647 PDEREGLIREIVSSGQTFQGLMKDQFGNYVVQRIL 681
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 131/259 (50%), Gaps = 11/259 (4%)
Query: 146 SSLRD-LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
S L D LRG+ + L+ YGCR +Q+ + + E I E+ + V + D GN+V+
Sbjct: 470 SQLADQLRGHFLQLSFQMYGCRVVQKVIDVVDLERKISIVGELKNSVLRCISDQNGNHVI 529
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVR-ICLNTHGIRAVLKLLENLTNPQQISLVLAAL 263
QK +E E+ + + D Q + +C + +G R + ++LE+ NP S V+ +
Sbjct: 530 QKCIECVPEDH----IPFVIEDILQKIYPLCTHQYGCRVIQRVLEHCHNPATQSAVMDEI 585
Query: 264 RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
A LT+D G+YV+Q+ ++H E+ ++ +++ ++ K V++ C+ +
Sbjct: 586 VERAFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEKCLSFG 645
Query: 324 KGAQRERLVAEIIANALL---LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSC 380
+RE L+ EI+++ L +D +GNYVVQ +L + +L ++ H
Sbjct: 646 TPDEREGLIREIVSSGQTFQGLMKDQFGNYVVQRILQTCDDKFLVVILSSIKMHLNELKN 705
Query: 381 NKYGSNVVERC--LLESGE 397
+G ++V R L+ +GE
Sbjct: 706 YTFGKHIVARVEKLIITGE 724
>gi|328866169|gb|EGG14555.1| RNA binding protein [Dictyostelium fasciculatum]
Length = 652
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 154/289 (53%), Gaps = 10/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D++G+I +KDQ G R +Q+ + + E+ +++F EVI V LM D FGNYV+QK
Sbjct: 325 LVDIKGHIAEFSKDQVGSRIIQQKIENANAEDKQLVFDEVIVAVHSLMTDVFGNYVLQKF 384
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S +Q+ RIL + L + L +G R + K +E++ QQI L+ L
Sbjct: 385 FEHGSSDQK-RILAEKLKGNILL--LALQMYGCRVIQKAIESIELDQQIMLI-QELDGHI 440
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V D NG++VIQ C++ +++++ + Y +AT GC V+Q +E+ Q
Sbjct: 441 VQCVTDQNGNHVIQKCIEKIPTNLIQFIIDSFNGHIYHLATHPYGCRVIQRILEHCSEQQ 500
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E++ A+ L +D YGNYV+QH+L ++++++L S +K+ SNV
Sbjct: 501 VAPILEELMRCAVSLVQDQYGNYVIQHVLEHGTQSDKSAIVQKLHNQVYQLSQHKFASNV 560
Query: 388 VERCLLESGEEQSTRIIIELL------RSPNVSMLLMHPFGNYVIQSAL 430
+E+C+ + II E+L S + +L P+ NYVIQ L
Sbjct: 561 IEKCVQYGSTAERAMIINEILGDQSGTTSSAMLKVLKDPYANYVIQKIL 609
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 134/250 (53%), Gaps = 16/250 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L+GNI+ LA YGCR +Q+ + S+ ++ M+ E+ + + + D GN+V+QK
Sbjct: 400 LKGNILLLALQMYGCRVIQKAIESIELDQQIMLIQELDGHIVQCVTDQNGNHVIQK---- 455
Query: 211 CSEEQRTRILLMLTNDDF--QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C E+ T ++ + D F + + + +G R + ++LE+ + QQ++ +L L AV
Sbjct: 456 CIEKIPTNLIQFII-DSFNGHIYHLATHPYGCRVIQRILEHCSE-QQVAPILEELMRCAV 513
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
+L +D G+YVIQ+ ++H + D ++ ++ + Y ++ K V++ CV+Y A+R
Sbjct: 514 SLVQDQYGNYVIQHVLEHGTQSDKSAIVQKLHNQVYQLSQHKFASNVIEKCVQYGSTAER 573
Query: 329 ERLVAEIIANA--------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSC 380
++ EI+ + L + +D Y NYV+Q +L + ++++++ + +
Sbjct: 574 AMIINEILGDQSGTTSSAMLKVLKDPYANYVIQKILDIVDQSQREMIIQRIQPYIATLRK 633
Query: 381 NKYGSNVVER 390
YG +++ R
Sbjct: 634 VTYGKHIISR 643
>gi|156064143|ref|XP_001597993.1| hypothetical protein SS1G_00079 [Sclerotinia sclerotiorum 1980]
gi|154690941|gb|EDN90679.1| hypothetical protein SS1G_00079 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 964
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 153/288 (53%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ ++V + DQ+G R +Q+ + + +E E +F E+ +LM D FGNYV+QKL
Sbjct: 557 LKDIYQHVVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKL 616
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + N ++ + + +G R V K LE++ QQ LV L
Sbjct: 617 FEHGNQVQKRVLAEQMKN---HVMELSMQMYGCRVVQKALEHVLADQQAELV-KELEADV 672
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q ++ E ++++ + +AT GC V+Q +EY +
Sbjct: 673 LKCVKDQNGNHVVQKAIERVPTEHIQFIIEAFRGQVHILATHPYGCRVIQRILEYCQPRD 732
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ER++ E+ A L D YGNYV QH++ P+ A +++ + ++ S +K+ SNV
Sbjct: 733 QERVLEELHQCASNLITDQYGNYVTQHVIQHGKPEDRAKIIKIVTAQLLTLSKHKFASNV 792
Query: 388 VERCLLESGEEQSTRII--IELLRSPNVS---MLLMHPFGNYVIQSAL 430
VE+ + +EQ I+ + L S S +++ +GNYVIQ L
Sbjct: 793 VEKSIQFGTDEQRHTIVSLLTALHSDGTSPLQLMMKDQYGNYVIQKLL 840
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ +Y L ++ + + D+ G +Q +E + ++E+L EI NAL L D +GNY
Sbjct: 552 NKRYELKDIYQHVVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNY 611
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
V+Q L L Q++ H + S YG VV++ L +Q ++ EL
Sbjct: 612 VIQKLFEHGNQVQKRVLAEQMKNHVMELSMQMYGCRVVQKALEHVLADQQAELVKEL--E 669
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
+V + GN+V+Q A+
Sbjct: 670 ADVLKCVKDQNGNHVVQKAI 689
>gi|20513851|gb|AAM22812.1|AF427791_3 BPM [Hordeum vulgare subsp. vulgare]
Length = 911
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 152/288 (52%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G++V + DQYG R +Q+ + + EE +M+F E++ + LM D FGNYVVQK
Sbjct: 573 LSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKF 632
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S Q + L +++ + L +G R + K +E + QQ +V L
Sbjct: 633 FEHGSTTQIKELSDQLIG---RVLALSLQMYGCRVIQKAIEVVDLAQQTKMV-GELDGHI 688
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ C++ + +++++ ++T GC V+Q +E+
Sbjct: 689 MRCVRDQNGNHVIQKCIECIPQDIIQFIVSTFYGQVVLLSTHPYGCRVIQRVLEHCDDPT 748
Query: 328 RERLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
++++ EI+ + LLA+D YGNYVVQH+L P +++ +L G V S K+ SN
Sbjct: 749 TQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERTAIIDKLIGQIVQMSQQKFASN 808
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVS----MLLMHPFGNYVIQSAL 430
V+E+CL + +I E+L S S +++ F NYV+Q L
Sbjct: 809 VIEKCLAFGNPVERQILIGEMLESTTESEPLEVMMKDQFANYVVQKVL 856
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 111/232 (47%), Gaps = 7/232 (3%)
Query: 200 GNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLV 259
GN + L E S + RT L + +V + +G R + + LE + ++ +V
Sbjct: 553 GNLMPSLLEEFKSNKSRTYELSEIAG---HVVEFSADQYGSRFIQQKLETASTEEK-DMV 608
Query: 260 LAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHC 319
+ + P A+TL D G+YV+Q +H S K L +++ ++ GC V+Q
Sbjct: 609 FSEIMPQALTLMTDVFGNYVVQKFFEHGSTTQIKELSDQLIGRVLALSLQMYGCRVIQKA 668
Query: 320 VEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFS 379
+E AQ+ ++V E+ + + D GN+V+Q + I ++ G V S
Sbjct: 669 IEVVDLAQQTKMVGELDGHIMRCVRDQNGNHVIQKCIECIPQDIIQFIVSTFYGQVVLLS 728
Query: 380 CNKYGSNVVERCLLESGEEQSTRIII-ELLRSPNVSMLLMHPFGNYVIQSAL 430
+ YG V++R L + + +I++ E+L+S V +L +GNYV+Q L
Sbjct: 729 THPYGCRVIQRVLEHCDDPTTQQIMMDEILQS--VCLLAQDQYGNYVVQHVL 778
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGNYVV 204
L G IV +++ ++ +++ ++ E +++ E+++ E +M D F NYVV
Sbjct: 793 LIGQIVQMSQQKFASNVIEKCLAFGNPVERQILIGEMLESTTESEPLEVMMKDQFANYVV 852
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
QK++E C ++QR IL + L + H + V KL+
Sbjct: 853 QKVLETCDDQQREMILTRIKAHLNTLKKYTYGKHIVARVEKLV 895
>gi|357130137|ref|XP_003566709.1| PREDICTED: pumilio homolog 1-like [Brachypodium distachyon]
Length = 857
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 152/286 (53%), Gaps = 9/286 (3%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
++ G++V + DQYG R +Q+ + + EE +M+F E++ + LM D FGNYVVQK E
Sbjct: 521 EIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFE 580
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
S Q + L +++ + L +G R + K +E + QQ +V A L +
Sbjct: 581 HGSTTQIKELSDQLIG---RVLALSLQMYGCRVIQKAIEVVDLAQQTKMV-AELDGHIMR 636
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
+D NG++VIQ C++ + +++++ ++T GC V+Q +E+ +
Sbjct: 637 CVRDQNGNHVIQKCIECIPQDVIQFIVSTFYGQVVLLSTHPYGCRVIQRVLEHCDDPTTQ 696
Query: 330 RLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
+++ EI+ + LLA+D YGNYVVQH+L P +++ +L G V S K+ SNV+
Sbjct: 697 QIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERTAIIDKLIGQVVQMSQQKFASNVI 756
Query: 389 ERCLLESGEEQSTRIIIELLRSPNVS----MLLMHPFGNYVIQSAL 430
E+CL + +I E+L S S +++ F NYV+Q L
Sbjct: 757 EKCLAFGNPVERQILIGEMLGSTTESEPLEVMMKDQFANYVVQKVL 802
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 112/232 (48%), Gaps = 7/232 (3%)
Query: 200 GNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLV 259
GN + L E S + RT L + +V + +G R + + LE + ++ +V
Sbjct: 499 GNLMPSLLEEFKSNKSRTYELCEIAG---HVVEFSADQYGSRFIQQKLETASTEEK-DMV 554
Query: 260 LAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHC 319
+ + P A+TL D G+YV+Q +H S K L +++ ++ GC V+Q
Sbjct: 555 FSEIMPQALTLMTDVFGNYVVQKFFEHGSTTQIKELSDQLIGRVLALSLQMYGCRVIQKA 614
Query: 320 VEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFS 379
+E AQ+ ++VAE+ + + D GN+V+Q + + ++ G V S
Sbjct: 615 IEVVDLAQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECIPQDVIQFIVSTFYGQVVLLS 674
Query: 380 CNKYGSNVVERCLLESGEEQSTRIII-ELLRSPNVSMLLMHPFGNYVIQSAL 430
+ YG V++R L + + +I++ E+L+S V +L +GNYV+Q L
Sbjct: 675 THPYGCRVIQRVLEHCDDPTTQQIMMDEILQS--VCLLAQDQYGNYVVQHVL 724
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGNYVV 204
L G +V +++ ++ +++ ++ E +++ E++ E +M D F NYVV
Sbjct: 739 LIGQVVQMSQQKFASNVIEKCLAFGNPVERQILIGEMLGSTTESEPLEVMMKDQFANYVV 798
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
QK++E C ++QR IL + L + H + V KL+
Sbjct: 799 QKVLETCDDQQREMILTRIKAHLNTLKKYTYGKHIVARVEKLV 841
>gi|347836748|emb|CCD51320.1| similar to pumilio domain-containing protein [Botryotinia
fuckeliana]
Length = 964
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 153/288 (53%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ ++V + DQ+G R +Q+ + + +E E +F E+ +LM D FGNYV+QKL
Sbjct: 557 LKDIYQHVVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKL 616
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + N ++ + + +G R V K LE++ QQ LV L
Sbjct: 617 FEHGNQVQKRVLAEQMKN---HVMELSMQMYGCRVVQKALEHVLADQQAELV-KELEADV 672
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q ++ E ++++ + +AT GC V+Q +EY +
Sbjct: 673 LKCVKDQNGNHVVQKAIERVPTEHIQFIIEAFRGQVHVLATHPYGCRVIQRILEYCQPRD 732
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ER++ E+ A L D YGNYV QH++ P+ A +++ + ++ S +K+ SNV
Sbjct: 733 QERVLEELHQCASNLITDQYGNYVTQHVIQHGKPEDRAKIVKIVTAQLLTLSKHKFASNV 792
Query: 388 VERCLLESGEEQSTRII--IELLRSPNVS---MLLMHPFGNYVIQSAL 430
VE+ + +EQ I+ + L S S +++ +GNYVIQ L
Sbjct: 793 VEKSIQFGTDEQRHTIVSLLTALHSDGTSPLQLMMKDQYGNYVIQKLL 840
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ +Y L ++ + + D+ G +Q +E + ++E+L EI NAL L D +GNY
Sbjct: 552 NKRYELKDIYQHVVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNY 611
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
V+Q L L Q++ H + S YG VV++ L +Q ++ EL
Sbjct: 612 VIQKLFEHGNQVQKRVLAEQMKNHVMELSMQMYGCRVVQKALEHVLADQQAELVKEL--E 669
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
+V + GN+V+Q A+
Sbjct: 670 ADVLKCVKDQNGNHVVQKAI 689
>gi|154298974|ref|XP_001549908.1| hypothetical protein BC1G_11734 [Botryotinia fuckeliana B05.10]
Length = 964
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 153/288 (53%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ ++V + DQ+G R +Q+ + + +E E +F E+ +LM D FGNYV+QKL
Sbjct: 557 LKDIYQHVVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKL 616
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + N ++ + + +G R V K LE++ QQ LV L
Sbjct: 617 FEHGNQVQKRVLAEQMKN---HVMELSMQMYGCRVVQKALEHVLADQQAELV-KELEADV 672
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q ++ E ++++ + +AT GC V+Q +EY +
Sbjct: 673 LKCVKDQNGNHVVQKAIERVPTEHIQFIIEAFRGQVHVLATHPYGCRVIQRILEYCQPRD 732
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ER++ E+ A L D YGNYV QH++ P+ A +++ + ++ S +K+ SNV
Sbjct: 733 QERVLEELHQCASNLITDQYGNYVTQHVIQHGKPEDRAKIVKIVTAQLLTLSKHKFASNV 792
Query: 388 VERCLLESGEEQSTRII--IELLRSPNVS---MLLMHPFGNYVIQSAL 430
VE+ + +EQ I+ + L S S +++ +GNYVIQ L
Sbjct: 793 VEKSIQFGTDEQRHTIVSLLTALHSDGTSPLQLMMKDQYGNYVIQKLL 840
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ +Y L ++ + + D+ G +Q +E + ++E+L EI NAL L D +GNY
Sbjct: 552 NKRYELKDIYQHVVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNY 611
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
V+Q L L Q++ H + S YG VV++ L +Q ++ EL
Sbjct: 612 VIQKLFEHGNQVQKRVLAEQMKNHVMELSMQMYGCRVVQKALEHVLADQQAELVKEL--E 669
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
+V + GN+V+Q A+
Sbjct: 670 ADVLKCVKDQNGNHVVQKAI 689
>gi|449453445|ref|XP_004144468.1| PREDICTED: pumilio homolog 5-like [Cucumis sativus]
Length = 1031
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 156/291 (53%), Gaps = 11/291 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G IV + DQ+G R +Q+ + EE +F EV+ +L+ D FGNYV+QK
Sbjct: 684 LSDIAGRIVEFSVDQHGSRFIQQKLEHCSPEEKASVFKEVLPHASKLITDVFGNYVIQKF 743
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQR + L Q++ + L +G R + K LE + Q+ LV L
Sbjct: 744 FEHGTHEQRKELADQLAG---QILPLSLQMYGCRVIQKALEVIELDQKTHLV-RELDGHV 799
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGA 326
+ +D NG++VIQ C++ E+ ++++ ++T GC V+Q +E+ S A
Sbjct: 800 MRCVRDQNGNHVIQKCIECVPSEEIDFIISSFEGQVATLSTHPYGCRVIQRILEHCSDEA 859
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q + +V EI+ + LA+D YGNYV+QH+L + + ++ +L G +V S +KY SN
Sbjct: 860 QSQCIVDEILDSVYGLAQDQYGNYVIQHVLERGMHHERSQIISKLTGKFVRMSQHKYASN 919
Query: 387 VVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYVIQSALLV 432
VVE+C LE G+ +IIE + N ++L M F NYV+Q + +
Sbjct: 920 VVEKC-LEHGDTIERELIIEEIMGQSEENDTLLAMMKDQFANYVVQKIIEI 969
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQR------TMSSLPKEEIEMIFVEVIDRVCELMIDPFGN 201
+ L G V +++ +Y +++ T+ E M E D + +M D F N
Sbjct: 901 ISKLTGKFVRMSQHKYASNVVEKCLEHGDTIERELIIEEIMGQSEENDTLLAMMKDQFAN 960
Query: 202 YVVQKLVELCSEEQRTRIL 220
YVVQK++E+C+++QR R+L
Sbjct: 961 YVVQKIIEICNDDQRERLL 979
>gi|449500099|ref|XP_004161004.1| PREDICTED: pumilio homolog 5-like [Cucumis sativus]
Length = 1031
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 156/291 (53%), Gaps = 11/291 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G IV + DQ+G R +Q+ + EE +F EV+ +L+ D FGNYV+QK
Sbjct: 684 LSDIAGRIVEFSVDQHGSRFIQQKLEHCSPEEKASVFKEVLPHASKLITDVFGNYVIQKF 743
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQR + L Q++ + L +G R + K LE + Q+ LV L
Sbjct: 744 FEHGTHEQRKELADQLAG---QILPLSLQMYGCRVIQKALEVIELDQKTHLV-RELDGHV 799
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGA 326
+ +D NG++VIQ C++ E+ ++++ ++T GC V+Q +E+ S A
Sbjct: 800 MRCVRDQNGNHVIQKCIECVPSEEIDFIISSFEGQVATLSTHPYGCRVIQRILEHCSDEA 859
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q + +V EI+ + LA+D YGNYV+QH+L + + ++ +L G +V S +KY SN
Sbjct: 860 QSQCIVDEILDSVYGLAQDQYGNYVIQHVLERGMHHERSQIISKLTGKFVRMSQHKYASN 919
Query: 387 VVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYVIQSALLV 432
VVE+C LE G+ +IIE + N ++L M F NYV+Q + +
Sbjct: 920 VVEKC-LEHGDTIERELIIEEIMGQSEENDTLLAMMKDQFANYVVQKIIEI 969
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQR------TMSSLPKEEIEMIFVEVIDRVCELMIDPFGN 201
+ L G V +++ +Y +++ T+ E M E D + +M D F N
Sbjct: 901 ISKLTGKFVRMSQHKYASNVVEKCLEHGDTIERELIIEEIMGQSEENDTLLAMMKDQFAN 960
Query: 202 YVVQKLVELCSEEQRTRIL 220
YVVQK++E+C+++QR R+L
Sbjct: 961 YVVQKIIEICNDDQRERLL 979
>gi|326512976|dbj|BAK03395.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 886
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 153/286 (53%), Gaps = 9/286 (3%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
++ G++V + DQYG R +Q+ + + EE +M+F E++ + LM D FGNYVVQK E
Sbjct: 548 EIAGHVVEFSADQYGSRFIQQKLETASVEEKDMVFTEIMPQALTLMTDVFGNYVVQKFFE 607
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
S Q + L +++ + L +G R + K +E + QQ +V A L +
Sbjct: 608 HGSTAQIKELADQLIG---RVLALSLQMYGCRVIQKAIEVVDLDQQTKMV-AELDGHVMR 663
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
+D NG++VIQ C++ +++++ ++T GC V+Q +E+ + +
Sbjct: 664 CVRDQNGNHVIQKCIECIPQNIIEFIVSTFYGQVVVLSTHPYGCRVIQRVLEHCDDPKTQ 723
Query: 330 RLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
+++ E++ + LLA D YGNYVVQH++ P ++++ +L G V S K+ SNV+
Sbjct: 724 QIMMDEVLQSVCLLATDQYGNYVVQHVMEHGKPHERSAIIEKLIGQIVQMSQQKFASNVI 783
Query: 389 ERCLLESGEEQSTRIIIELL----RSPNVSMLLMHPFGNYVIQSAL 430
E+CL + +I E+L S ++ +++ F NYV+Q L
Sbjct: 784 EKCLSFGSPVERQILIGEMLGSTEESEHLEVMMKDQFANYVVQKVL 829
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 110/231 (47%), Gaps = 7/231 (3%)
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVL 260
N V L E S + R+ L + +V + +G R + + LE + ++ +V
Sbjct: 527 NLVPSLLEEFKSNKSRSYELCEIAG---HVVEFSADQYGSRFIQQKLET-ASVEEKDMVF 582
Query: 261 AALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCV 320
+ P A+TL D G+YV+Q +H S K L +++ ++ GC V+Q +
Sbjct: 583 TEIMPQALTLMTDVFGNYVVQKFFEHGSTAQIKELADQLIGRVLALSLQMYGCRVIQKAI 642
Query: 321 EYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSC 380
E Q+ ++VAE+ + + D GN+V+Q + I ++ G V S
Sbjct: 643 EVVDLDQQTKMVAELDGHVMRCVRDQNGNHVIQKCIECIPQNIIEFIVSTFYGQVVVLST 702
Query: 381 NKYGSNVVERCLLESGEEQSTRIII-ELLRSPNVSMLLMHPFGNYVIQSAL 430
+ YG V++R L + ++ +I++ E+L+S V +L +GNYV+Q +
Sbjct: 703 HPYGCRVIQRVLEHCDDPKTQQIMMDEVLQS--VCLLATDQYGNYVVQHVM 751
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ +S E +++ E++ E +M D F N
Sbjct: 763 IEKLIGQIVQMSQQKFASNVIEKCLSFGSPVERQILIGEMLGSTEESEHLEVMMKDQFAN 822
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 823 YVVQKVLETCDDQQREAILTRIKAHLNTLKKYTYGKHIVARVEKLV 868
>gi|413917932|gb|AFW57864.1| hypothetical protein ZEAMMB73_710513 [Zea mays]
Length = 658
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 150/289 (51%), Gaps = 6/289 (2%)
Query: 144 DCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYV 203
D L DL G++ ++ DQYG R +Q+ + ++ E IF E++ L D FGNYV
Sbjct: 302 DSVELIDLVGHVKEISMDQYGSRFIQQKLEIASLDDREKIFPEILSNAIALTTDVFGNYV 361
Query: 204 VQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL 263
+QK E +E Q ++ L ++ + L +G R V K+LE + ++I +V L
Sbjct: 362 IQKFFEFATERQLIQLADQLKG---HILELSLQMYGCRVVQKVLEVVDKDRKIDIV-HEL 417
Query: 264 RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
R + D NG++VIQ C++ + ++++ + + T + GC V+Q +E+
Sbjct: 418 RNHILKCIGDQNGNHVIQKCIECVPEDRIPFVIDPILSQILVLCTHQYGCRVIQRVLEHC 477
Query: 324 KG-AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ + EI+ L +D +GNYVVQH+L P+ ++++++L G V S K
Sbjct: 478 HDPVTQSATMNEIVQQTFHLTDDKFGNYVVQHVLKHGKPEERSAIIQKLSGQVVILSKLK 537
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHP-FGNYVIQSAL 430
Y SNV+E+CL E+ +I E++ S LM FGNYV+Q L
Sbjct: 538 YASNVIEKCLEFGTLEERDSLIGEIISSGQTFQELMKDQFGNYVVQKVL 586
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 132/256 (51%), Gaps = 8/256 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L+G+I+ L+ YGCR +Q+ + + K+ I E+ + + + + D GN+V+QK +E
Sbjct: 381 LKGHILELSLQMYGCRVVQKVLEVVDKDRKIDIVHELRNHILKCIGDQNGNHVIQKCIEC 440
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E+ RI ++ Q++ +C + +G R + ++LE+ +P S + + L
Sbjct: 441 VPED---RIPFVIDPILSQILVLCTHQYGCRVIQRVLEHCHDPVTQSATMNEIVQQTFHL 497
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
T D G+YV+Q+ +KH E+ ++ +++ ++ K V++ C+E+ +R+
Sbjct: 498 TDDKFGNYVVQHVLKHGKPEERSAIIQKLSGQVVILSKLKYASNVIEKCLEFGTLEERDS 557
Query: 331 LVAEIIANALLLAE---DCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
L+ EII++ E D +GNYVVQ +L + +L ++ H YG ++
Sbjct: 558 LIGEIISSGQTFQELMKDQFGNYVVQKVLKTCDERYLEMILSSIKLHLNELKNYTYGKHI 617
Query: 388 VERC--LLESGEEQST 401
V R L+ +G EQ+
Sbjct: 618 VTRVEKLIVTGGEQTA 633
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR---VCELMIDPFGNYVV 204
++ L G +V L+K +Y +++ + EE + + E+I ELM D FGNYVV
Sbjct: 523 IQKLSGQVVILSKLKYASNVIEKCLEFGTLEERDSLIGEIISSGQTFQELMKDQFGNYVV 582
Query: 205 QKLVELCSEEQRTRIL 220
QK+++ C E IL
Sbjct: 583 QKVLKTCDERYLEMIL 598
>gi|413917933|gb|AFW57865.1| hypothetical protein ZEAMMB73_710513 [Zea mays]
Length = 654
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 150/289 (51%), Gaps = 6/289 (2%)
Query: 144 DCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYV 203
D L DL G++ ++ DQYG R +Q+ + ++ E IF E++ L D FGNYV
Sbjct: 302 DSVELIDLVGHVKEISMDQYGSRFIQQKLEIASLDDREKIFPEILSNAIALTTDVFGNYV 361
Query: 204 VQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL 263
+QK E +E Q ++ L ++ + L +G R V K+LE + ++I +V L
Sbjct: 362 IQKFFEFATERQLIQLADQLKG---HILELSLQMYGCRVVQKVLEVVDKDRKIDIV-HEL 417
Query: 264 RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
R + D NG++VIQ C++ + ++++ + + T + GC V+Q +E+
Sbjct: 418 RNHILKCIGDQNGNHVIQKCIECVPEDRIPFVIDPILSQILVLCTHQYGCRVIQRVLEHC 477
Query: 324 KG-AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ + EI+ L +D +GNYVVQH+L P+ ++++++L G V S K
Sbjct: 478 HDPVTQSATMNEIVQQTFHLTDDKFGNYVVQHVLKHGKPEERSAIIQKLSGQVVILSKLK 537
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHP-FGNYVIQSAL 430
Y SNV+E+CL E+ +I E++ S LM FGNYV+Q L
Sbjct: 538 YASNVIEKCLEFGTLEERDSLIGEIISSGQTFQELMKDQFGNYVVQKVL 586
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 133/255 (52%), Gaps = 8/255 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L+G+I+ L+ YGCR +Q+ + + K+ I E+ + + + + D GN+V+QK +E
Sbjct: 381 LKGHILELSLQMYGCRVVQKVLEVVDKDRKIDIVHELRNHILKCIGDQNGNHVIQKCIEC 440
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E+ RI ++ Q++ +C + +G R + ++LE+ +P S + + L
Sbjct: 441 VPED---RIPFVIDPILSQILVLCTHQYGCRVIQRVLEHCHDPVTQSATMNEIVQQTFHL 497
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
T D G+YV+Q+ +KH E+ ++ +++ ++ K V++ C+E+ +R+
Sbjct: 498 TDDKFGNYVVQHVLKHGKPEERSAIIQKLSGQVVILSKLKYASNVIEKCLEFGTLEERDS 557
Query: 331 LVAEIIANALLLAE---DCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
L+ EII++ E D +GNYVVQ +L + +L ++ H YG ++
Sbjct: 558 LIGEIISSGQTFQELMKDQFGNYVVQKVLKTCDERYLEMILSSIKLHLNELKNYTYGKHI 617
Query: 388 VERC--LLESGEEQS 400
V R L+ +GEE++
Sbjct: 618 VTRVEKLIVTGEERA 632
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR---VCELMIDPFGNYVV 204
++ L G +V L+K +Y +++ + EE + + E+I ELM D FGNYVV
Sbjct: 523 IQKLSGQVVILSKLKYASNVIEKCLEFGTLEERDSLIGEIISSGQTFQELMKDQFGNYVV 582
Query: 205 QKLVELCSEEQRTRIL 220
QK+++ C E IL
Sbjct: 583 QKVLKTCDERYLEMIL 598
>gi|448514914|ref|XP_003867201.1| Puf3 protein [Candida orthopsilosis Co 90-125]
gi|380351540|emb|CCG21763.1| Puf3 protein [Candida orthopsilosis]
Length = 769
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 154/288 (53%), Gaps = 10/288 (3%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
SL+D+ G+ V KDQ+G R +Q + EE E+IF E+ D +LM D FGNYV+QK
Sbjct: 445 SLKDIYGHGVEFTKDQHGSRFIQTKLPQASDEEKEVIFKEICDISFDLMTDVFGNYVMQK 504
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E S EQ+ +L + ++L L T+G R V + LE+L P Q+ ++L L+
Sbjct: 505 YFEYGSIEQKQILLQKMLGHIYEL---SLQTYGCRVVQRALESLEEPDQLKIIL-ELQDK 560
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ D N ++VIQ ++ + +++ + + + Y + TD+ GC V+Q + +
Sbjct: 561 VLVCATDQNSNHVIQKSIELIPFDKVRFISDVLQTHFYHLCTDQYGCRVVQRLIHFGNDN 620
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLL--ALRVPQITASLLRQLEGHYVSFSCNKYG 384
++ + EI + L +GNYVVQ L +LR +I +++ + + F+ NKY
Sbjct: 621 DKQEIYTEIKDHVSFLITHKFGNYVVQACLENSLRESEIFTTVVSK----FTHFATNKYA 676
Query: 385 SNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLV 432
SNV E+ + + + Q +I+ +++ + ++ +GNYV+Q + V
Sbjct: 677 SNVCEKLVDLATQSQIQQILEVVMQGNELERIMGDEYGNYVVQKIVSV 724
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 5/149 (3%)
Query: 294 YLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQ 353
+ L ++ + D+ G +Q + + ++E + EI + L D +GNYV+Q
Sbjct: 444 FSLKDIYGHGVEFTKDQHGSRFIQTKLPQASDEEKEVIFKEICDISFDLMTDVFGNYVMQ 503
Query: 354 HLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNV 413
+ LL+++ GH S YG VV+R L E +II+EL V
Sbjct: 504 KYFEYGSIEQKQILLQKMLGHIYELSLQTYGCRVVQRALESLEEPDQLKIILEL--QDKV 561
Query: 414 SMLLMHPFGNYVIQSALLV---SKVRLFS 439
+ N+VIQ ++ + KVR S
Sbjct: 562 LVCATDQNSNHVIQKSIELIPFDKVRFIS 590
>gi|357135024|ref|XP_003569112.1| PREDICTED: pumilio homolog 1-like, partial [Brachypodium
distachyon]
Length = 639
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 152/286 (53%), Gaps = 9/286 (3%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
++ G++V + DQYG R +Q+ + + EE +M+F E++ + LM D FGNYVVQK E
Sbjct: 303 EIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFE 362
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
S Q + L +++ + L +G R + K +E + QQ +V A L +
Sbjct: 363 HGSTTQIKELSDQLIG---RVLALSLQMYGCRVIQKAIEVVDLAQQTKMV-AELDGHIMR 418
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
+D NG++VIQ C++ + +++++ ++T GC V+Q +E+ +
Sbjct: 419 CVRDQNGNHVIQKCIECIPQDVIQFIVSTFYGQVVLLSTHPYGCRVIQRVLEHCDDPTTQ 478
Query: 330 RLVA-EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
+++ EI+ + LLA+D YGNYVVQH+L P +++ +L G V S K+ SNV+
Sbjct: 479 QIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERTAIIDKLIGQVVQMSQQKFASNVI 538
Query: 389 ERCLLESGEEQSTRIIIELLRSPNVS----MLLMHPFGNYVIQSAL 430
E+CL + +I E+L S S +++ F NYV+Q L
Sbjct: 539 EKCLAFGNPVERQILIGEMLGSTTESEPLEVMMKDQFANYVVQKVL 584
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 112/232 (48%), Gaps = 7/232 (3%)
Query: 200 GNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLV 259
GN + L E S + RT L + +V + +G R + + LE + ++ +V
Sbjct: 281 GNLMPSLLEEFKSNKSRTYELCEIAG---HVVEFSADQYGSRFIQQKLETASTEEK-DMV 336
Query: 260 LAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHC 319
+ + P A+TL D G+YV+Q +H S K L +++ ++ GC V+Q
Sbjct: 337 FSEIMPQALTLMTDVFGNYVVQKFFEHGSTTQIKELSDQLIGRVLALSLQMYGCRVIQKA 396
Query: 320 VEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFS 379
+E AQ+ ++VAE+ + + D GN+V+Q + + ++ G V S
Sbjct: 397 IEVVDLAQQTKMVAELDGHIMRCVRDQNGNHVIQKCIECIPQDVIQFIVSTFYGQVVLLS 456
Query: 380 CNKYGSNVVERCLLESGEEQSTRIII-ELLRSPNVSMLLMHPFGNYVIQSAL 430
+ YG V++R L + + +I++ E+L+S V +L +GNYV+Q L
Sbjct: 457 THPYGCRVIQRVLEHCDDPTTQQIMMDEILQS--VCLLAQDQYGNYVVQHVL 506
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGNYVV 204
L G +V +++ ++ +++ ++ E +++ E++ E +M D F NYVV
Sbjct: 521 LIGQVVQMSQQKFASNVIEKCLAFGNPVERQILIGEMLGSTTESEPLEVMMKDQFANYVV 580
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
QK++E C ++QR IL + L + H + V KL+
Sbjct: 581 QKVLETCDDQQREMILTRIKAHLNTLKKYTYGKHIVARVEKLV 623
>gi|302853691|ref|XP_002958359.1| pumilio family protein [Volvox carteri f. nagariensis]
gi|300256312|gb|EFJ40581.1| pumilio family protein [Volvox carteri f. nagariensis]
Length = 345
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 153/299 (51%), Gaps = 18/299 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRT------MSSLPKEEIEMIFVEVIDRVCELMIDPFGN 201
LR++ G++ + DQ+G R +Q+ + + E+++ F EV+ R+ LM D FGN
Sbjct: 16 LREILGHVYEFSLDQHGSRFIQQARGGGLKLECVNNEDVDAAFGEVVPRILHLMTDVFGN 75
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLA 261
YVVQK +E + + R I L QL L +G R V K LE T QQ+ LV +
Sbjct: 76 YVVQKFLEHGTPQHRACISKALHGHVLQL---SLQMYGCRVVQKALEVFTEDQQVDLV-S 131
Query: 262 ALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVE 321
L + +D NG++VIQ C++ LL+ ++T GC ++Q +E
Sbjct: 132 ELDGHVMRCVRDQNGNHVIQKCIECVPTHRIAGLLDNFLMCVVPLSTHPFGCRIIQRILE 191
Query: 322 YSKGAQRERLV-AEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSC 380
+ + +R V A+I+ A+ L +D YGNYV+QH+L P+ +S++ L V S
Sbjct: 192 HVRDQRRRAAVMADILGAAVQLTQDQYGNYVIQHVLERGTPEEKSSIIGSLSATVVQLSM 251
Query: 381 NKYGSNVVERCLLESGEEQSTRIIIELLRSPNVS-------MLLMHPFGNYVIQSALLV 432
+K+ SNV+E+CL+ II +L N+S ++ FGNYV+Q L V
Sbjct: 252 HKFASNVIEKCLIHGSTADRDLIINRMLGPLNISPKRGPWTAMIKDQFGNYVVQKVLEV 310
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 128/253 (50%), Gaps = 16/253 (6%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ L G+++ L+ YGCR +Q+ + +++ + E+ V + D GN+V+QK +
Sbjct: 95 KALHGHVLQLSLQMYGCRVVQKALEVFTEDQQVDLVSELDGHVMRCVRDQNGNHVIQKCI 154
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C R LL D+F + + L+TH G R + ++LE++ + ++ + V+A +
Sbjct: 155 E-CVPTHRIAGLL----DNFLMCVVPLSTHPFGCRIIQRILEHVRDQRRRAAVMADILGA 209
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
AV LT+D G+YVIQ+ ++ + E+ ++ ++ ++ K V++ C+ + A
Sbjct: 210 AVQLTQDQYGNYVIQHVLERGTPEEKSSIIGSLSATVVQLSMHKFASNVIEKCLIHGSTA 269
Query: 327 QRERLVAEIIANALL---------LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVS 377
R+ ++ ++ + + +D +GNYVVQ +L + ++L ++ +
Sbjct: 270 DRDLIINRMLGPLNISPKRGPWTAMIKDQFGNYVVQKVLEVCTDVQREAMLARVRAQLHA 329
Query: 378 FSCNKYGSNVVER 390
YG ++V R
Sbjct: 330 LKRFTYGKHIVAR 342
>gi|406607837|emb|CCH40775.1| putative translational repressor [Wickerhamomyces ciferrii]
Length = 729
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 161/298 (54%), Gaps = 25/298 (8%)
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSE 213
+I+ L+ DQYGCR LQ+ + L ++IF ++ + + +L+I+PFGNY++QKL++ S
Sbjct: 270 DILKLSVDQYGCRFLQKKLD-LDVSIKDVIFNKIFNNLIDLIINPFGNYLIQKLIDYLSN 328
Query: 214 EQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT---- 269
Q+ L++ L I +N +G R++ K+++ ++N QI L++ L+ VT
Sbjct: 329 YQKD---LLIEKIHTYLFLISINQYGTRSLQKIIDKVSNTYQIDLIIKGLQINDVTNGID 385
Query: 270 ------LTKDTNGHYVIQYCVKHFSHEDTKYLLNE--VADNCYGIATDKSGCCVLQHCVE 321
L KD NG++VIQ C+ F E +++++ + +N I+T K GCCVLQ +
Sbjct: 386 DNNIVKLIKDLNGNHVIQKCIFKFPPEKFQFIIDSICINNNIVRISTHKHGCCVLQKLLN 445
Query: 322 YSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASL-------LRQLEGH 374
+ Q + ++ L D +GNY++Q L L + + ++ ++ +
Sbjct: 446 NANFNQILNIAKMLLIYLDDLINDQFGNYIIQFLFELNFLKTSKNISFLIDEFFNKIYNN 505
Query: 375 YVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLR--SPNVSMLLMHPFGNYVIQSAL 430
+ SC K+ SNVVE+ + +Q+ + E+++ N +L+ FGNYVIQ+ +
Sbjct: 506 LIQLSCLKFSSNVVEKFIKILKFKQNYLYLTEIIKLVDYNFELLIKDKFGNYVIQTLI 563
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 71/144 (49%), Gaps = 7/144 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+ NIV ++ ++GC LQ+ +++ +I I ++ + +L+ D FGNY++Q L EL
Sbjct: 423 INNNIVRISTHKHGCCVLQKLLNNANFNQILNIAKMLLIYLDDLINDQFGNYIIQFLFEL 482
Query: 211 CSEEQRTRILLMLT-------NDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL 263
+ I ++ N+ QL + +++ + +K+L+ N ++ ++ +
Sbjct: 483 NFLKTSKNISFLIDEFFNKIYNNLIQLSCLKFSSNVVEKFIKILKFKQNYLYLTEIIKLV 542
Query: 264 RPGAVTLTKDTNGHYVIQYCVKHF 287
L KD G+YVIQ + F
Sbjct: 543 DYNFELLIKDKFGNYVIQTLIDQF 566
>gi|296482387|tpg|DAA24502.1| TPA: pumilio homolog 2 [Bos taurus]
Length = 370
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 168/313 (53%), Gaps = 21/313 (6%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 5 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQA 64
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 65 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 121
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNE-----VADNCYG 305
++ QQ +V L + KD NG++V+Q C++ + +++++ ++ NC+
Sbjct: 122 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQFISSNCFK 180
Query: 306 I---ATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ 362
+ +T GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+
Sbjct: 181 VFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPE 240
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLMH 419
+ ++ ++ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M
Sbjct: 241 DKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMM 300
Query: 420 P--FGNYVIQSAL 430
+ NYV+Q +
Sbjct: 301 KDQYANYVVQKMI 313
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 138/275 (50%), Gaps = 22/275 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ + E+
Sbjct: 75 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELD 134
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILL------MLTNDDFQLVRICLNTHGIRA 242
V + + D GN+VVQK +E C + Q + ++ ++++ F++ + + +G R
Sbjct: 135 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFIIDAFKGQFISSNCFKVFVLSTHPYGCRV 193
Query: 243 VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADN 302
+ ++LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+
Sbjct: 194 IQRILEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGK 252
Query: 303 CYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHL 355
++ K V++ CV ++ A+R L+ E+ +AL + +D Y NYVVQ +
Sbjct: 253 VLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKM 312
Query: 356 LALRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ + P ++ ++ H + YG +++ +
Sbjct: 313 IDMAEPAQRKIIMHKIRPHISTLRKYTYGKHILAK 347
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 97/234 (41%), Gaps = 46/234 (19%)
Query: 95 NQDSSILNLLHNHNFDGLR-SNGNELSSVPRNQWMSSLSLKRNQWLQDSFDCSSLRDLRG 153
+Q S ++ L H ++ NGN + + + + + Q++ D+F +
Sbjct: 124 DQQSEMVKELDGHVLKCVKDQNGNHVV----QKCIECVQPQSLQFIIDAFKGQFISSNCF 179
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSE 213
+ L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 180 KVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRP 239
Query: 214 EQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA---------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 240 EDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSALYT 298
Query: 243 ---------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 299 MMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHISTLRKYTYGKHILAKLEKYY 352
>gi|242556581|pdb|3GVO|A Chain A, Structure And Rna Binding Of The Mouse Pumilio-2 Puf
Domain
gi|242556583|pdb|3GVT|A Chain A, Structure And Rna Binding Of The Mouse Pumilio-2 Puf
Domain
gi|242556584|pdb|3GVT|B Chain B, Structure And Rna Binding Of The Mouse Pumilio-2 Puf
Domain
Length = 351
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +++F E++
Sbjct: 4 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQA 63
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++
Sbjct: 64 AYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 120
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
++ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 121 SSDQQSEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHP 179
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++ +
Sbjct: 180 YGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 239
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLMHP--FGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 240 IRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 299
Query: 426 IQSAL 430
+Q +
Sbjct: 300 VQKMI 304
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 135/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG+++ LA YGCR +Q+ + S+ ++ + E+
Sbjct: 74 NYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELD 133
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 134 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRI 188
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ T Q + +L L L +D G+YVIQ+ ++H ED +++E+ +
Sbjct: 189 LEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLAL 247
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ A+R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 248 SQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMA 307
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 308 EPAQRKIIMHKIRPHITTLRKYTYGKHILAK 338
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 98/234 (41%), Gaps = 54/234 (23%)
Query: 95 NQDSSILNLLHNHNFDGLR-SNGNELSSVPRNQWMSSLSLKRNQWLQDSFDCSSLRDLRG 153
+Q S ++ L H ++ NGN + + + + + Q++ D+F +G
Sbjct: 123 DQQSEMVKELDGHVLKCVKDQNGNHVV----QKCIECVQPQSLQFIIDAF--------KG 170
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSE 213
+ L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 171 QVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRP 230
Query: 214 EQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA---------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 231 EDKSKIVSEIRGKVLALSQHKFASNVVEKCV-THASRAERALLIDEVCCQNDGPHSALYT 289
Query: 243 ---------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 290 MMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 343
>gi|367014775|ref|XP_003681887.1| hypothetical protein TDEL_0E04330 [Torulaspora delbrueckii]
gi|359749548|emb|CCE92676.1| hypothetical protein TDEL_0E04330 [Torulaspora delbrueckii]
Length = 589
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 161/306 (52%), Gaps = 22/306 (7%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
SL D+ G ++ KDQ+G R +Q +S + E E+IF EV D EL D FGNYV+QK
Sbjct: 244 SLNDILGYVLEFCKDQHGSRFIQHELSVVSLAEREVIFNEVRDHAIELSDDVFGNYVIQK 303
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E S Q+ ++++ ++ ++ + + R + K+LE + PQ+I+LV L
Sbjct: 304 FFEFGSTTQKA---VLVSQFRGKMKKLSMQMYACRVIQKVLEYIDLPQRIALV-NELSSC 359
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ + KD NG++VIQ ++ + ++L+ + Y ++T GC V+Q +E+
Sbjct: 360 VLQMIKDQNGNHVIQKAIERIPMTELPFILDSLDGQIYHLSTHSYGCRVIQRLLEFGSEQ 419
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALR----VPQITAS---LLRQLEGHYVSFS 379
+ R++AE+ +D YGNYV+QH+L + P++ + +++ + + V FS
Sbjct: 420 DQSRILAELKDFIPYSIQDQYGNYVIQHILQQKDSESYPEMRETKQVIVKTVSQNVVEFS 479
Query: 380 CNKYGSNVVERCLLESGEEQSTRIIIELL-----------RSPNVSMLLMHPFGNYVIQS 428
+K+ SNVVE+ +L Q I+ ++L S + +++ F NYV+Q
Sbjct: 480 KHKFASNVVEKAILYGSPNQKAMIVSQILPRNESHARDLEDSAPMILMMRDQFANYVVQK 539
Query: 429 ALLVSK 434
+ VS+
Sbjct: 540 LVGVSE 545
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 2/137 (1%)
Query: 294 YLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQ 353
Y LN++ D+ G +QH + A+RE + E+ +A+ L++D +GNYV+Q
Sbjct: 243 YSLNDILGYVLEFCKDQHGSRFIQHELSVVSLAEREVIFNEVRDHAIELSDDVFGNYVIQ 302
Query: 354 HLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNV 413
A L+ Q G S Y V+++ L Q ++ EL S V
Sbjct: 303 KFFEFGSTTQKAVLVSQFRGKMKKLSMQMYACRVIQKVLEYIDLPQRIALVNEL--SSCV 360
Query: 414 SMLLMHPFGNYVIQSAL 430
++ GN+VIQ A+
Sbjct: 361 LQMIKDQNGNHVIQKAI 377
>gi|301609979|ref|XP_002934529.1| PREDICTED: pumilio homolog 2-like [Xenopus (Silurana) tropicalis]
Length = 1175
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 154/288 (53%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL G+IV ++DQ+G R +Q+ + E +++F E++ +LM D FGNYV+QK
Sbjct: 835 LRDLMGHIVEFSQDQHGSRFIQQKLERASPAERQLVFSEILQAAYQLMTDVFGNYVIQKF 894
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S +Q+ L + T ++ + L +G R + K LE+++ QQ +V L
Sbjct: 895 FEFGSMDQK---LALATRIRGHVLPLALQMYGCRVIQKALESISIDQQSEMV-RELDGHV 950
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ Y ++T GC V+Q +E+ Q
Sbjct: 951 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVYVLSTHPYGCRVIQRILEHCTPEQ 1010
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L + ++ ++ G ++ S +K+ SNV
Sbjct: 1011 TLPILEELHQSTEQLVQDQYGNYVIQHVLEHGRSDDKSKIVSEVRGKVLALSQHKFASNV 1070
Query: 388 VERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYVIQSAL 430
VE+C+ S + +I E+ P+ ++ M + NYV+Q +
Sbjct: 1071 VEKCVTHSSRTERALLIDEICCQNDGPHCALYTMMKDQYANYVVQKMI 1118
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 137/271 (50%), Gaps = 17/271 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 910 IRGHVLPLALQMYGCRVIQKALESISIDQQSEMVRELDGHVLKCVKDQNGNHVVQKCIE- 968
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T P+Q +L L
Sbjct: 969 CVQPQSLQFII----DAFKGQVYVLSTHPYGCRVIQRILEHCT-PEQTLPILEELHQSTE 1023
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H +D +++EV ++ K V++ CV +S +R
Sbjct: 1024 QLVQDQYGNYVIQHVLEHGRSDDKSKIVSEVRGKVLALSQHKFASNVVEKCVTHSSRTER 1083
Query: 329 ERLVAEIIAN------ALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ EI AL + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 1084 ALLIDEICCQNDGPHCALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 1143
Query: 382 KYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
YG +++ + LE ++T + L+ PN
Sbjct: 1144 TYGKHILAK--LEKYYMKNTPDLGPLVGPPN 1172
>gi|196010159|ref|XP_002114944.1| hypothetical protein TRIADDRAFT_28798 [Trichoplax adhaerens]
gi|190582327|gb|EDV22400.1| hypothetical protein TRIADDRAFT_28798 [Trichoplax adhaerens]
Length = 488
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 159/311 (51%), Gaps = 22/311 (7%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L++L +IV ++DQ+G R +Q+ + E +++F E+I+ +LM D FGNYV+QK
Sbjct: 140 LKELCNHIVEFSQDQHGSRFIQQKLERATTAEKQLVFNEIINSAYDLMTDVFGNYVIQKF 199
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L+ ++ + L +G R + K LE++ QQ +V L
Sbjct: 200 FEFGSSEQKQ---LLAERVKGHVLPLALQMYGCRVIQKALESIPVEQQTEVV-KELDGHV 255
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ S ++++N + ++T GC V+Q +E+ Q
Sbjct: 256 LKCVKDQNGNHVVQKCIECVSPSALQFIINAFKKQVFSLSTHPYGCRVIQRILEHCTPEQ 315
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
E ++ E+ L D YGNYV+QH+L + + ++ +L G V S +K+ SNV
Sbjct: 316 TEPILDELHEATEQLVLDQYGNYVIQHVLEHGRLEDKSKIISKLTGKIVELSQHKFASNV 375
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVS--------MLLMHPFGNYVIQS----------A 429
+E+C+ S + + ++ E+ S + S ++ F NYVIQ
Sbjct: 376 IEKCVSHSTKAERALLVEEVCSSHSDSNQNNSGLYTMMKDQFANYVIQKMIDMADSPQRK 435
Query: 430 LLVSKVRLFSS 440
+L+ K+R F+
Sbjct: 436 ILIQKIRPFTG 446
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 109/253 (43%), Gaps = 54/253 (21%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+++ LA YGCR +Q+ + S+P E+ + E+ V + + D GN+VVQK +E
Sbjct: 215 VKGHVLPLALQMYGCRVIQKALESIPVEQQTEVVKELDGHVLKCVKDQNGNHVVQKCIEC 274
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
S L + F+ L+TH G R + ++LE+ T P+Q +L L
Sbjct: 275 VSPS-----ALQFIINAFKKQVFSLSTHPYGCRVIQRILEHCT-PEQTEPILDELHEATE 328
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L D G+YVIQ+ ++H ED +++++ ++ K V++ CV +S A+R
Sbjct: 329 QLVLDQYGNYVIQHVLEHGRLEDKSKIISKLTGKIVELSQHKFASNVIEKCVSHSTKAER 388
Query: 329 ERLVAEI---------------------IANALL-------------------------L 342
LV E+ AN ++ L
Sbjct: 389 ALLVEEVCSSHSDSNQNNSGLYTMMKDQFANYVIQKMIDMADSPQRKILIQKIRPFTGVL 448
Query: 343 AEDCYGNYVVQHL 355
+ YG +++ L
Sbjct: 449 RKYTYGKHILAKL 461
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 95/187 (50%), Gaps = 4/187 (2%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE N + +L L L V ++D +G IQ ++ + + + + NE+ ++ Y
Sbjct: 125 RLLEEFRNNRYPNLQLKELCNHIVEFSQDQHGSRFIQQKLERATTAEKQLVFNEIINSAY 184
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLL-ALRVPQI 363
+ TD G V+Q E+ Q++ L + + L LA YG V+Q L ++ V Q
Sbjct: 185 DLMTDVFGNYVIQKFFEFGSSEQKQLLAERVKGHVLPLALQMYGCRVIQKALESIPVEQQ 244
Query: 364 TASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGN 423
T ++++L+GH + ++ G++VV++C +E + + II + V L HP+G
Sbjct: 245 T-EVVKELDGHVLKCVKDQNGNHVVQKC-IECVSPSALQFIINAFKK-QVFSLSTHPYGC 301
Query: 424 YVIQSAL 430
VIQ L
Sbjct: 302 RVIQRIL 308
>gi|328849409|gb|EGF98590.1| hypothetical protein MELLADRAFT_40771 [Melampsora larici-populina
98AG31]
Length = 370
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 165/335 (49%), Gaps = 24/335 (7%)
Query: 105 HNHNFDGLRSNGNELSSVPRNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYG 164
H +FDG R + + + RN K +W L D+ G+IV A DQ G
Sbjct: 22 HKGSFDGNRVHRSAILEEFRNN-------KHRRW--------ELTDMAGHIVEFAGDQLG 66
Query: 165 CRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLT 224
RH+Q + + EE E++F E+ V +L +D F NYVVQK E ++ Q+T++ L
Sbjct: 67 SRHIQSKLDTATTEEKEIVFNEIYPNVLQLSMDVFANYVVQKFFEQGNQAQKTQLAESLR 126
Query: 225 NDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCV 284
QL L +G R + K LE + QQ +++ L + KD N ++V+Q +
Sbjct: 127 GHVLQL---SLQMYGCRVIQKALEFVLVDQQHAII-KELEGEVIQCAKDQNANHVLQRSL 182
Query: 285 KHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAE 344
+ + +++ + +AT GC VLQ E+ Q L+ E+ + L
Sbjct: 183 ERIDPKMNRFISQAFVGQAFALATHPYGCRVLQRVFEHMPEDQTRGLLEELHRFSNNLMT 242
Query: 345 DCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRII 404
D YGNYV Q ++ + A+++ +++G + S +K+ SNVVE+ +L+S EE+ ++I
Sbjct: 243 DQYGNYVAQWIITDGKKEDAAAMMAKVKGQVLLMSKHKFASNVVEKAILKSTEEEMHQMI 302
Query: 405 IELLR-----SPNVSMLLMHPFGNYVIQSALLVSK 434
E+L + V ++L F N+ +Q L SK
Sbjct: 303 EEILAPRADGTSTVGVMLKDAFANFPLQKFLQASK 337
>gi|4539306|emb|CAB39609.1| pumilio-like protein [Arabidopsis thaliana]
gi|7269439|emb|CAB79443.1| pumilio-like protein [Arabidopsis thaliana]
Length = 849
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 152/302 (50%), Gaps = 21/302 (6%)
Query: 155 IVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEE 214
+ + DQ+G R +Q+ + + EE +F E++ C+LM D FGNYV+QK E +
Sbjct: 525 LFPFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNST 584
Query: 215 QRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDT 274
QR + L Q+V + L +G R + K L+ + Q++ L L + +D
Sbjct: 585 QRKELADQLMG---QIVPLSLQMYGCRVIQKALDVIEPDQRVRLA-RELDGQVMRCVRDQ 640
Query: 275 NGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAE 334
NG++VIQ C+++ + ++L ++ GC V+Q +E + R + E
Sbjct: 641 NGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITE 700
Query: 335 -IIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLL 393
I+ + +L++D YGNYV QH+L + + R+L GH V S +K+ SNV+E+C L
Sbjct: 701 EILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASNVIEKC-L 759
Query: 394 ESGEEQSTRIIIELLRSPNVS-----MLLMHPFGNYVIQSAL----------LVSKVRLF 438
E G +II+ + P+ S M++ +GNYV+Q L S+VR+
Sbjct: 760 EYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRLTLFSRVRMH 819
Query: 439 SS 440
+S
Sbjct: 820 AS 821
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 123/254 (48%), Gaps = 9/254 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G IV L+ YGCR +Q+ + + ++ + E+ +V + D GN+V+QK +E
Sbjct: 593 LMGQIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDGQVMRCVRDQNGNHVIQKCIEN 652
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ ++ ML Q+ + ++ +G R + +LLE ++ Q + + L
Sbjct: 653 IPAD---KVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILESVCVL 709
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+KD G+YV Q+ ++ + E+ + + +++ + ++ K V++ C+EY +R+
Sbjct: 710 SKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASNVIEKCLEYGGRVERDL 769
Query: 331 LVAEIIA------NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
++ EI + L++ +D YGNYVVQ + +L ++ H + YG
Sbjct: 770 IIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRLTLFSRVRMHASALKKYTYG 829
Query: 385 SNVVERCLLESGEE 398
++V R S EE
Sbjct: 830 KHIVSRLEQPSIEE 843
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 96/218 (44%), Gaps = 6/218 (2%)
Query: 216 RTRIL--LMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKD 273
R R L M+TN L + HG R + + LEN P++ + V + P A L D
Sbjct: 509 RLRFLPNYMITNLSKILFPFSADQHGSRFIQQKLENC-KPEEKAAVFREILPHACKLMTD 567
Query: 274 TNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVA 333
G+YVIQ ++ + K L +++ ++ GC V+Q ++ + QR RL
Sbjct: 568 VFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQRVRLAR 627
Query: 334 EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLL 393
E+ + D GN+V+Q + +L G S S + YG V++R L
Sbjct: 628 ELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLE 687
Query: 394 ESGEEQSTRIII-ELLRSPNVSMLLMHPFGNYVIQSAL 430
+ R I E+L S V +L +GNYV Q L
Sbjct: 688 RCSHDHQCRFITEEILES--VCVLSKDQYGNYVTQHVL 723
>gi|345567293|gb|EGX50227.1| hypothetical protein AOL_s00076g302 [Arthrobotrys oligospora ATCC
24927]
Length = 880
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 151/291 (51%), Gaps = 10/291 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ ++V + DQ+G R +Q+ + + +E ++IF E+ +LM D FGNYV+QK
Sbjct: 508 LKDIYNHVVEFSGDQHGSRFIQQKLETATSDEKDVIFSEIRPNALQLMTDVFGNYVIQKF 567
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + + ++++ L +G R V K LE++ QQ +L+ +
Sbjct: 568 FEHGNQLQKAMLAKQM---EGHVLKLSLQMYGCRVVQKALEHVLTEQQATLI-KEIDGNV 623
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q ++ + ++L +AT GC V+Q +E+
Sbjct: 624 LKCVKDQNGNHVVQKAIERVPAQHIDFILKAFKGQVQSLATHPYGCRVIQRMLEHCDEPA 683
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ ++ E+ L +D YGNYV QH++ P+ A ++ + H + FS +K+ SNV
Sbjct: 684 QSSILQELNMCLYALIQDQYGNYVTQHVIEHGKPEDRAKIIHVVSQHVIQFSKHKFASNV 743
Query: 388 VERCLLESGEEQSTRII--IELLRS----PNVSMLLMHPFGNYVIQSALLV 432
VE+ + E+Q ++ I +S P + L+ +GNYVIQ L +
Sbjct: 744 VEKSIQYGNEKQRKEVLGTITAPKSADGPPPLQTLMKDQYGNYVIQKLLFL 794
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 119/254 (46%), Gaps = 14/254 (5%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ + G+++ L+ YGCR +Q+ + + E+ + E+ V + + D GN+VVQK +
Sbjct: 581 KQMEGHVLKLSLQMYGCRVVQKALEHVLTEQQATLIKEIDGNVLKCVKDQNGNHVVQKAI 640
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
E + IL Q+ + + +G R + ++LE+ P Q S +L L
Sbjct: 641 ERVPAQHIDFILKAFKG---QVQSLATHPYGCRVIQRMLEHCDEPAQSS-ILQELNMCLY 696
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YV Q+ ++H ED +++ V+ + + K V++ ++Y QR
Sbjct: 697 ALIQDQYGNYVTQHVIEHGKPEDRAKIIHVVSQHVIQFSKHKFASNVVEKSIQYGNEKQR 756
Query: 329 ERLVAEIIANA--------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSC 380
+ ++ I A L +D YGNYV+Q LL L + +L+ ++ +
Sbjct: 757 KEVLGTITAPKSADGPPPLQTLMKDQYGNYVIQKLLFLLDEEDRDTLIEAIKPQLANLKR 816
Query: 381 NKYGS--NVVERCL 392
YG N +E+ +
Sbjct: 817 FSYGKQLNAIEKMI 830
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
+Y L ++ ++ + D+ G +Q +E + +++ + +EI NAL L D +GNYV+
Sbjct: 505 RYELKDIYNHVVEFSGDQHGSRFIQQKLETATSDEKDVIFSEIRPNALQLMTDVFGNYVI 564
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q A L +Q+EGH + S YG VV++ L EQ +I E+ N
Sbjct: 565 QKFFEHGNQLQKAMLAKQMEGHVLKLSLQMYGCRVVQKALEHVLTEQQATLIKEI--DGN 622
Query: 413 VSMLLMHPFGNYVIQSAL 430
V + GN+V+Q A+
Sbjct: 623 VLKCVKDQNGNHVVQKAI 640
>gi|261328601|emb|CBH11579.1| pumillio RNA binding protein 4, putative [Trypanosoma brucei
gambiense DAL972]
Length = 1033
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 142/250 (56%), Gaps = 16/250 (6%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLP--KEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
G IV LA DQ GCR LQ + P E++ + E++ + ++M DP+GN++VQKL+E+
Sbjct: 539 GRIVKLAADQQGCRMLQSVLERFPFHSSEVQKVISELLPVLTDVMKDPYGNFLVQKLLEV 598
Query: 211 CSEEQRTRILLMLTNDDFQ----LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
+E+R R+L D+ L + ++ HG AV KL+++L + Q++ +V AL+ G
Sbjct: 599 APDEERMRLL------DYHISASLCDVAISPHGNYAVQKLIDSLRSSQEVQVVCRALQRG 652
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ L D NG +VIQ ++ S +D +L + + + + DK GCCV+Q C++++
Sbjct: 653 TLQLMTDLNGGHVIQKLLQCISQKDLTFLYDVIVKDTVDVCNDKHGCCVVQKCMDHAINV 712
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQL---EGHYVSFSC-NK 382
+R I+ + L L+ + YGNYVV HL+++ Q ++ + G + C NK
Sbjct: 713 HLQRTQKAILRHMLQLSLNPYGNYVVTHLISMCNSQSQRHVVNEAAHCAGPALELLCANK 772
Query: 383 YGSNVVERCL 392
+ SNVVE+ +
Sbjct: 773 FASNVVEKIV 782
>gi|331214059|ref|XP_003319711.1| hypothetical protein PGTG_01885 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309298701|gb|EFP75292.1| hypothetical protein PGTG_01885 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 807
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 148/292 (50%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G IV A DQ G RH+Q + + EE ++F E+ V +L +D F NYVVQK
Sbjct: 442 LKDMTGLIVEFAGDQLGSRHIQSKLDTATPEEKTIVFEEIYPHVLQLSMDVFANYVVQKF 501
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E SE Q+ ++ L QL L +G R + K LE + PQQ L++ L
Sbjct: 502 FEQGSEAQKAKLAESLRGHVLQL---SLQMYGCRVIQKALEFIQVPQQ-HLLIKELEGEV 557
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD N ++V+Q ++ ++ + +AT GC VLQ E+ Q
Sbjct: 558 IQCAKDQNANHVLQRSLERIDCNVNLFISKAFTGQAFALATHPYGCRVLQKVFEHMPDEQ 617
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ L+ E+ + L D YGNYV Q ++ + A++L +++G + S +K+ SNV
Sbjct: 618 TKPLLEELHRFSNNLMTDQYGNYVAQWIITDGKKEDAAAMLAKVQGQVLLLSKHKFASNV 677
Query: 388 VERCLLESGEEQSTRIIIELLR-----SPNVSMLLMHPFGNYVIQSALLVSK 434
VE+ +L+S +++ +I E+L + V ++L F N+ +Q L +K
Sbjct: 678 VEKAILKSTDDEKKEMIDEILAPRTDGTSTVGIMLKDAFANFPLQKFLQAAK 729
>gi|340518502|gb|EGR48743.1| predicted protein [Trichoderma reesei QM6a]
Length = 341
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 152/289 (52%), Gaps = 9/289 (3%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
LRD+ + V + DQ+G R +Q+ + + +E E IF E+ +LM D FGNYV+QK
Sbjct: 21 ELRDIYNHAVEFSGDQHGSRFIQQKLETANSDEKEQIFREIEPNAVQLMKDVFGNYVIQK 80
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E S+ Q+ ++ ++V + + + R V K LE++ QQ +L L P
Sbjct: 81 FFEYGSQLQKK---ILAEKMKGKVVDLSVQVYACRVVQKALEHILVEQQAALT-RELEPE 136
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ + KD NG++V+Q ++ + +++ V +A+ GC V+Q +E+ A
Sbjct: 137 ILRVIKDQNGNHVVQKIIELVPRQHIDFIMKAVRGQVTPLASHAYGCRVIQRLLEHGTEA 196
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ ++ E+ A+A LL D YGNYV QH++ P+ ++R + G ++ S +K+ SN
Sbjct: 197 DKAEIMGELHASAQLLITDQYGNYVAQHVIQNGEPEDRERIIRLVMGQLLTLSKHKFASN 256
Query: 387 VVERCLLESGEEQSTRIIIELLRS-PN----VSMLLMHPFGNYVIQSAL 430
VVE+C+ Q T I +L + P+ + ++ FGNYVIQ L
Sbjct: 257 VVEKCIEYGTPAQRTTIREQLTTAGPDGNNPLQQMMRDQFGNYVIQKLL 305
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 94/228 (41%), Gaps = 47/228 (20%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G +V L+ Y CR +Q+ + + E+ + E+ + ++ D GN+VVQK++EL
Sbjct: 97 MKGKVVDLSVQVYACRVVQKALEHILVEQQAALTRELEPEILRVIKDQNGNHVVQKIIEL 156
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
R I ++ Q+ + + +G R + +LLE+ T + ++ L A L
Sbjct: 157 VP---RQHIDFIMKAVRGQVTPLASHAYGCRVIQRLLEHGTEADKAE-IMGELHASAQLL 212
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS------- 323
D G+YV Q+ +++ ED + ++ V ++ K V++ C+EY
Sbjct: 213 ITDQYGNYVAQHVIQNGEPEDRERIIRLVMGQLLTLSKHKFASNVVEKCIEYGTPAQRTT 272
Query: 324 ------------------------------------KGAQRERLVAEI 335
+G +RE LV EI
Sbjct: 273 IREQLTTAGPDGNNPLQQMMRDQFGNYVIQKLLGQLQGDEREALVEEI 320
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ +Y L ++ ++ + D+ G +Q +E + ++E++ EI NA+ L +D +GNY
Sbjct: 17 NKRYELRDIYNHAVEFSGDQHGSRFIQQKLETANSDEKEQIFREIEPNAVQLMKDVFGNY 76
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
V+Q L +++G V S Y VV++ L EQ + EL
Sbjct: 77 VIQKFFEYGSQLQKKILAEKMKGKVVDLSVQVYACRVVQKALEHILVEQQAALTREL--E 134
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
P + ++ GN+V+Q +
Sbjct: 135 PEILRVIKDQNGNHVVQKII 154
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
++ +RG + LA YGCR +QR + + + I E+ L+ D +GNYV Q +
Sbjct: 166 MKAVRGQVTPLASHAYGCRVIQRLLEHGTEADKAEIMGELHASAQLLITDQYGNYVAQHV 225
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISL--VLAALRP 265
++ E R RI+ ++ QL+ + + V K +E T Q+ ++ L P
Sbjct: 226 IQNGEPEDRERIIRLVMG---QLLTLSKHKFASNVVEKCIEYGTPAQRTTIREQLTTAGP 282
Query: 266 GA----VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+ +D G+YVIQ + ++ + L+ E+ Y
Sbjct: 283 DGNNPLQQMMRDQFGNYVIQKLLGQLQGDEREALVEEIKPQFY 325
>gi|123432416|ref|XP_001308417.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
gi|121890096|gb|EAX95487.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
Length = 399
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 152/278 (54%), Gaps = 11/278 (3%)
Query: 156 VALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQ 215
V A+D R LQ+ M+ K+E+++IF + + EL+ D N+V+QKL E +EEQ
Sbjct: 82 VMQARDPMKSRSLQKKMTECSKQELDIIFNSLYPSLNELVFDQSANFVIQKLCETATEEQ 141
Query: 216 RTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTN 275
+ + L +D L I ++ R + + +E T + I + AL+P ++L N
Sbjct: 142 QQKFLKFFLSD---LNNIVDHSIACRVLQRFIET-TQKENIEKLFNALKPNLMSLCLSQN 197
Query: 276 GHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEI 335
G++++Q V + +++ + + +A D GC ++Q + K Q E +VAE+
Sbjct: 198 GNHIVQRFVMSLPSK-LNVIIDAILPSVVPLAIDNCGCRIVQRLFDQYKIEQLESIVAEV 256
Query: 336 IANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLES 395
+ NA+ LA + YGNYVVQ++LA + ++LL+ +G + FS +K+ SNV+E+C+ +
Sbjct: 257 MRNAVELATNQYGNYVVQYILASNKHEHISNLLKAFKGRFYQFSLHKFASNVIEKCIRGA 316
Query: 396 GEEQSTRIIIELLRSP------NVSMLLMHPFGNYVIQ 427
EE+ I E++ S +S ++ FGNYVIQ
Sbjct: 317 SEEERMEIFPEIIGSAPDFNATRISTMVEDQFGNYVIQ 354
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 13/233 (5%)
Query: 164 GCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLML 223
CR LQR + + KE IE +F + + L + GN++VQ+ V + I +L
Sbjct: 162 ACRVLQRFIETTQKENIEKLFNALKPNLMSLCLSQNGNHIVQRFVMSLPSKLNVIIDAIL 221
Query: 224 TNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYC 283
+ +V + ++ G R V +L + Q S+V +R AV L + G+YV+QY
Sbjct: 222 PS----VVPLAIDNCGCRIVQRLFDQYKIEQLESIVAEVMR-NAVELATNQYGNYVVQYI 276
Query: 284 VKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANA---- 339
+ HE LL Y + K V++ C+ + +R + EII +A
Sbjct: 277 LASNKHEHISNLLKAFKGRFYQFSLHKFASNVIEKCIRGASEEERMEIFPEIIGSAPDFN 336
Query: 340 ----LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
+ ED +GNYV+Q ++ + ++ + +Y +Y +V+
Sbjct: 337 ATRISTMVEDQFGNYVIQRIIEFGTEEQQTAIYNVVFDNYQKLEGIQYSKHVL 389
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 3/181 (1%)
Query: 254 QQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGC 313
Q++ ++ +L P L D + ++VIQ + + E + L + I C
Sbjct: 104 QELDIIFNSLYPSLNELVFDQSANFVIQKLCETATEEQQQKFLKFFLSDLNNIVDHSIAC 163
Query: 314 CVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEG 373
VLQ +E ++ E+L + N + L GN++VQ + + +P ++ +
Sbjct: 164 RVLQRFIETTQKENIEKLFNALKPNLMSLCLSQNGNHIVQRFV-MSLPSKLNVIIDAILP 222
Query: 374 HYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVS 433
V + + G +V+R + EQ I+ E++R N L + +GNYV+Q L +
Sbjct: 223 SVVPLAIDNCGCRIVQRLFDQYKIEQLESIVAEVMR--NAVELATNQYGNYVVQYILASN 280
Query: 434 K 434
K
Sbjct: 281 K 281
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 13/175 (7%)
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSE 213
++V LA D GCR +QR E++E I EV+ EL + +GNYVVQ ++
Sbjct: 223 SVVPLAIDNCGCRIVQRLFDQYKIEQLESIVAEVMRNAVELATNQYGNYVVQYILASNKH 282
Query: 214 EQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA------ 267
E + +L +Q L+ + K + + +++ + +
Sbjct: 283 EHISNLLKAFKGRFYQF---SLHKFASNVIEKCIRGASEEERMEIFPEIIGSAPDFNATR 339
Query: 268 -VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADN---CYGIATDKSGCCVLQH 318
T+ +D G+YVIQ ++ + E + N V DN GI K LQH
Sbjct: 340 ISTMVEDQFGNYVIQRIIEFGTEEQQTAIYNVVFDNYQKLEGIQYSKHVLLKLQH 394
>gi|212526552|ref|XP_002143433.1| mRNA binding protein Pumilio 2, putative [Talaromyces marneffei
ATCC 18224]
gi|210072831|gb|EEA26918.1| mRNA binding protein Pumilio 2, putative [Talaromyces marneffei
ATCC 18224]
Length = 929
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 155/289 (53%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ +IV + DQ+G R +Q+ + S +E + +F E+ +LM D FGNYVVQKL
Sbjct: 500 LKDIYNHIVEFSGDQHGSRFIQQKLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKL 559
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ RIL ++ + +G R V K LE++ QQ ++V L
Sbjct: 560 FEHGNQSQK-RILANQMKS--HILALSTQMYGCRVVQKALEHILTDQQAAMV-KELDQHV 615
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ ++ +++++ N +AT GC V+Q +E+ + A
Sbjct: 616 MKCVRDQNGNHVIQKAIERVPTHHIRFIIDAFKGNVNKLATHPYGCRVIQRMLEHCETAD 675
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
RE ++ E+ L D +GNYV+QH++ + + +++ + + +FS +K+ SNV
Sbjct: 676 RESILTELHVCTESLIPDQFGNYVIQHVIENGEEKDRSVMIKSVVKNIHNFSKHKFASNV 735
Query: 388 VERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSAL 430
VE+ +E GEE R II LL + N + L+ +GNYVIQ L
Sbjct: 736 VEKS-IEFGEESQRREIIRLLTAHNDRGESPLLALMRDQYGNYVIQKVL 783
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ +Y L ++ ++ + D+ G +Q +E + +++++ EI N L L D +GNY
Sbjct: 495 NKRYELKDIYNHIVEFSGDQHGSRFIQQKLESANSDEKDQVFREIQPNCLQLMTDVFGNY 554
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
VVQ L L Q++ H ++ S YG VV++ L +Q ++ EL +
Sbjct: 555 VVQKLFEHGNQSQKRILANQMKSHILALSTQMYGCRVVQKALEHILTDQQAAMVKELDQ- 613
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 614 -HVMKCVRDQNGNHVIQKAI 632
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVC--ELMIDPFGNYVVQKLV 208
+GN+ LA YGCR +QR + + E I E+ VC L+ D FGNYV+Q ++
Sbjct: 647 FKGNVNKLATHPYGCRVIQRMLEHCETADRESILTEL--HVCTESLIPDQFGNYVIQHVI 704
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA- 267
E E+ R+ ++ + + + ++ + ++ E + I L+ A G
Sbjct: 705 ENGEEKDRSVMIKSVVKNIHNFSKHKFASNVVEKSIEFGEESQRREIIRLLTAHNDRGES 764
Query: 268 --VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV 299
+ L +D G+YVIQ + + + +++E+
Sbjct: 765 PLLALMRDQYGNYVIQKVLGQVKDSEREMIIDEI 798
>gi|62002537|gb|AAX58753.1| PUF-domain RNA-binding protein [Physcomitrella patens]
Length = 1118
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 157/306 (51%), Gaps = 14/306 (4%)
Query: 135 RNQWLQDSFDCSSLR-----DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVID 189
R L + F S R D+ ++V + DQ+G R +Q+ + + E+ M+F EV+
Sbjct: 761 RGSTLLEEFKNSKTRRFDLLDITEHVVEFSVDQHGSRFIQQKLETATPEDKNMVFQEVLP 820
Query: 190 RVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLEN 249
R LM D FGNYV+QK E +++QR + L ++ + L +G R + K LE
Sbjct: 821 RALTLMTDVFGNYVIQKFFEHGTQQQRRELANQLVG---HVLVLSLQMYGCRVIQKALEV 877
Query: 250 LTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATD 309
+ QQ LV + L + +D NG++VIQ C++ ++++ + ++T
Sbjct: 878 VDVDQQTVLV-SELDGHVMRCVRDQNGNHVIQKCIECVPPAKINFIISAFYNQVVTLSTH 936
Query: 310 KSGCCVLQHCVEYSKGAQRER-LVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLL 368
GC V+Q +E+ Q+++ ++ EI+ + LA+D YGNYVVQH+L ++
Sbjct: 937 PYGCRVIQRVLEHCTDEQKQKGIMEEILRSTCTLAQDQYGNYVVQHVLEHGRDYERTEII 996
Query: 369 RQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNY 424
+L G V S +K+ SNVVE+CL G + +I E+L + + ++ F NY
Sbjct: 997 TKLAGQIVQMSQHKFASNVVEKCLEYGGPVERQILIDEMLGHTDENEPLQAMMKDQFANY 1056
Query: 425 VIQSAL 430
V+Q L
Sbjct: 1057 VVQKVL 1062
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 109/250 (43%), Gaps = 45/250 (18%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G+++ L+ YGCR +Q+ + + ++ ++ E+ V + D GN+V+QK +E
Sbjct: 854 LVGHVLVLSLQMYGCRVIQKALEVVDVDQQTVLVSELDGHVMRCVRDQNGNHVIQKCIEC 913
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ I+ N Q+V + + +G R + ++LE+ T+ Q+ ++ + TL
Sbjct: 914 VPPAKINFIISAFYN---QVVTLSTHPYGCRVIQRVLEHCTDEQKQKGIMEEILRSTCTL 970
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YV+Q+ ++H + ++ ++A ++ K V++ C+EY +R+
Sbjct: 971 AQDQYGNYVVQHVLEHGRDYERTEIITKLAGQIVQMSQHKFASNVVEKCLEYGGPVERQI 1030
Query: 331 LVAEIIANA--------------------------------LLLA----------EDCYG 348
L+ E++ + LLL + YG
Sbjct: 1031 LIDEMLGHTDENEPLQAMMKDQFANYVVQKVLETCDESQRELLLGRIRVHLHALKKYTYG 1090
Query: 349 NYVVQHLLAL 358
++V + L
Sbjct: 1091 KHIVARVEKL 1100
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ + E +++ E++ E +M D F N
Sbjct: 996 ITKLAGQIVQMSQHKFASNVVEKCLEYGGPVERQILIDEMLGHTDENEPLQAMMKDQFAN 1055
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C E QR +L + L + H + V KL+
Sbjct: 1056 YVVQKVLETCDESQRELLLGRIRVHLHALKKYTYGKHIVARVEKLV 1101
>gi|403340179|gb|EJY69363.1| Pumilio [Oxytricha trifallax]
Length = 1146
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 160/301 (53%), Gaps = 16/301 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ +L+ +IV A DQYG R +Q+ E E+IF E++ LM D FGNYVVQKL
Sbjct: 670 IAELKDHIVECAMDQYGSRFIQQKYDITSSAEKELIFNEILPESFNLMNDVFGNYVVQKL 729
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E +EE R+ + L + ++++ + +G R V K LE ++ QQ ++++ L+
Sbjct: 730 FEYGTEEHRSTLAEQLLGN---VLKLTKSMYGCRVVQKALEVISLHQQ-KILVSELKDNI 785
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ D NG++VIQ C++ +D ++++ V + + GC V+Q +E S A
Sbjct: 786 IDCINDQNGNHVIQKCIEKMPCDDIEFIIKPVIEKTSELCVHTYGCRVIQRVLENSNEAY 845
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLA-LRVPQITASLLRQLEGHYVSFSCNKYGSN 386
++ I+ + L D +GNYV+QH+L +V + +++ ++G + S +K+ SN
Sbjct: 846 TRSIIEGILNDLHNLTMDQFGNYVIQHILENGKVQEDKDRVVKSIKGKVIELSNHKFASN 905
Query: 387 VVERCLLESGEEQSTRIIIELL-----------RSPNVSMLLMHPFGNYVIQSALLVSKV 435
VVE+CL + E+ +I E L ++ + ++ +GNYVIQ + VS+
Sbjct: 906 VVEKCLQYASEKDKAELIEEFLDLNFDEEAAMNQNGVLYQMMKDRYGNYVIQKCIEVSQG 965
Query: 436 R 436
+
Sbjct: 966 K 966
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 102/212 (48%), Gaps = 16/212 (7%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ +L+ NI+ DQ G +Q+ + +P ++IE I VI++ EL + +G V+Q++
Sbjct: 778 VSELKDNIIDCINDQNGNHVIQKCIEKMPCDDIEFIIKPVIEKTSELCVHTYGCRVIQRV 837
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E +E I+ + ND L + ++ G + +LEN + V+ +++
Sbjct: 838 LENSNEAYTRSIIEGILND---LHNLTMDQFGNYVIQHILENGKVQEDKDRVVKSIKGKV 894
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVAD-------------NCYGIATDKSGCC 314
+ L+ V++ C+++ S +D L+ E D Y + D+ G
Sbjct: 895 IELSNHKFASNVVEKCLQYASEKDKAELIEEFLDLNFDEEAAMNQNGVLYQMMKDRYGNY 954
Query: 315 VLQHCVEYSKGAQRERLVAEIIANALLLAEDC 346
V+Q C+E S+G QRE L+ I A A +L +
Sbjct: 955 VIQKCIEVSQGKQREILMKRITACANILKKQA 986
>gi|168012861|ref|XP_001759120.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689819|gb|EDQ76189.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1119
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 157/306 (51%), Gaps = 14/306 (4%)
Query: 135 RNQWLQDSFDCSSLR-----DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVID 189
R L + F S R D+ ++V + DQ+G R +Q+ + + E+ M+F EV+
Sbjct: 762 RGSTLLEEFKNSKTRRFDLLDITEHVVEFSVDQHGSRFIQQKLETATPEDKNMVFQEVLP 821
Query: 190 RVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLEN 249
R LM D FGNYV+QK E +++QR + L ++ + L +G R + K LE
Sbjct: 822 RALTLMTDVFGNYVIQKFFEHGTQQQRRELANQLVG---HVLVLSLQMYGCRVIQKALEV 878
Query: 250 LTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATD 309
+ QQ LV + L + +D NG++VIQ C++ ++++ + ++T
Sbjct: 879 VDVDQQTVLV-SELDGHVMRCVRDQNGNHVIQKCIECVPPAKINFIISAFYNQVVTLSTH 937
Query: 310 KSGCCVLQHCVEYSKGAQRER-LVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLL 368
GC V+Q +E+ Q+++ ++ EI+ + LA+D YGNYVVQH+L ++
Sbjct: 938 PYGCRVIQRVLEHCTDEQKQKGIMEEILRSTCTLAQDQYGNYVVQHVLEHGRDYERTEII 997
Query: 369 RQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNY 424
+L G V S +K+ SNVVE+CL G + +I E+L + + ++ F NY
Sbjct: 998 TKLAGQIVQMSQHKFASNVVEKCLEYGGPVERQILIDEMLGHTDENEPLQAMMKDQFANY 1057
Query: 425 VIQSAL 430
V+Q L
Sbjct: 1058 VVQKVL 1063
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 109/250 (43%), Gaps = 45/250 (18%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G+++ L+ YGCR +Q+ + + ++ ++ E+ V + D GN+V+QK +E
Sbjct: 855 LVGHVLVLSLQMYGCRVIQKALEVVDVDQQTVLVSELDGHVMRCVRDQNGNHVIQKCIEC 914
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ I+ N Q+V + + +G R + ++LE+ T+ Q+ ++ + TL
Sbjct: 915 VPPAKINFIISAFYN---QVVTLSTHPYGCRVIQRVLEHCTDEQKQKGIMEEILRSTCTL 971
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YV+Q+ ++H + ++ ++A ++ K V++ C+EY +R+
Sbjct: 972 AQDQYGNYVVQHVLEHGRDYERTEIITKLAGQIVQMSQHKFASNVVEKCLEYGGPVERQI 1031
Query: 331 LVAEIIANA--------------------------------LLLA----------EDCYG 348
L+ E++ + LLL + YG
Sbjct: 1032 LIDEMLGHTDENEPLQAMMKDQFANYVVQKVLETCDESQRELLLGRIRVHLHALKKYTYG 1091
Query: 349 NYVVQHLLAL 358
++V + L
Sbjct: 1092 KHIVARVEKL 1101
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ + E +++ E++ E +M D F N
Sbjct: 997 ITKLAGQIVQMSQHKFASNVVEKCLEYGGPVERQILIDEMLGHTDENEPLQAMMKDQFAN 1056
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C E QR +L + L + H + V KL+
Sbjct: 1057 YVVQKVLETCDESQRELLLGRIRVHLHALKKYTYGKHIVARVEKLV 1102
>gi|242072408|ref|XP_002446140.1| hypothetical protein SORBIDRAFT_06g002250 [Sorghum bicolor]
gi|241937323|gb|EES10468.1| hypothetical protein SORBIDRAFT_06g002250 [Sorghum bicolor]
Length = 761
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 151/293 (51%), Gaps = 6/293 (2%)
Query: 140 QDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPF 199
++ D L D+ G + ++ DQYG R +Q+ + + E IF E++ L D F
Sbjct: 406 RNGLDSVELIDVVGRVKEVSMDQYGSRFIQQKLEIASLDVREKIFPEILSNAIALTTDVF 465
Query: 200 GNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLV 259
GNYV+QK E +E Q ++ L ++ + L +G R V K+LE + ++I +V
Sbjct: 466 GNYVIQKFFEFATESQLIQLADKLKG---HILELSLQMYGCRVVQKVLEVVDMDRKIDIV 522
Query: 260 LAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHC 319
L+ + D NG++VIQ C++ + ++++ + + T + GC V+Q
Sbjct: 523 -HELKNYVLKCIGDQNGNHVIQKCIECVPEDRIPFVIDPILSQILVLCTHQYGCRVIQRV 581
Query: 320 VEYSKG-AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSF 378
+E+ + ++ EI+ L +D +GNYVVQH+L P+ +S++++L G V
Sbjct: 582 LEHCHDPVTQSAIMNEIVQQTFHLTDDKFGNYVVQHVLEHGKPEERSSIIQKLSGQVVIL 641
Query: 379 SCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHP-FGNYVIQSAL 430
S K+ SNV+E+CL E+ +I E++ S LM FGNYV+Q L
Sbjct: 642 SKQKFASNVIEKCLAFGTPEERDSLIGEIISSGQTFQELMKDQFGNYVVQRVL 694
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 132/255 (51%), Gaps = 8/255 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L+G+I+ L+ YGCR +Q+ + + + I E+ + V + + D GN+V+QK +E
Sbjct: 489 LKGHILELSLQMYGCRVVQKVLEVVDMDRKIDIVHELKNYVLKCIGDQNGNHVIQKCIEC 548
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E+ RI ++ Q++ +C + +G R + ++LE+ +P S ++ + L
Sbjct: 549 VPED---RIPFVIDPILSQILVLCTHQYGCRVIQRVLEHCHDPVTQSAIMNEIVQQTFHL 605
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
T D G+YV+Q+ ++H E+ ++ +++ ++ K V++ C+ + +R+
Sbjct: 606 TDDKFGNYVVQHVLEHGKPEERSSIIQKLSGQVVILSKQKFASNVIEKCLAFGTPEERDS 665
Query: 331 LVAEIIANALLLAE---DCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
L+ EII++ E D +GNYVVQ +L + +L ++ H YG ++
Sbjct: 666 LIGEIISSGQTFQELMKDQFGNYVVQRVLQTCDDKYLEMILSSIKLHLNELKNYTYGKHI 725
Query: 388 VERC--LLESGEEQS 400
V R L+ +GE+++
Sbjct: 726 VARVEKLIVTGEKRA 740
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR---VCELMIDPFGN 201
S ++ L G +V L+K ++ +++ ++ EE + + E+I ELM D FGN
Sbjct: 628 SSIIQKLSGQVVILSKQKFASNVIEKCLAFGTPEERDSLIGEIISSGQTFQELMKDQFGN 687
Query: 202 YVVQKLVELCSEEQRTRIL 220
YVVQ++++ C ++ IL
Sbjct: 688 YVVQRVLQTCDDKYLEMIL 706
>gi|213402367|ref|XP_002171956.1| PUF3 [Schizosaccharomyces japonicus yFS275]
gi|212000003|gb|EEB05663.1| PUF3 [Schizosaccharomyces japonicus yFS275]
Length = 840
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 157/296 (53%), Gaps = 11/296 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVC-ELMIDPFGNYVVQK 206
++ L G++ A + DQ+G R LQ+ + + E+ ++F ++++ C +LM+D FGNYVVQK
Sbjct: 499 IKQLVGHLAAFSTDQHGSRFLQQKIETCSDEDRALLFHDIVNGNCLQLMMDVFGNYVVQK 558
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L+E ++EQR + ++ + L +G R K LE++ +Q+ L+ L
Sbjct: 559 LLEFGTDEQREVFTEKMKG---HVLTLSLQMYGCRVAQKALEHIPLNRQVELI-QELDGD 614
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++VIQ ++ + +++++ V N Y +++ GC V+Q +E+ A
Sbjct: 615 VLKCVKDQNGNHVIQKAIECIPYGHLQFVVDAVMPNVYNLSSHPYGCRVIQRIIEHFADA 674
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
R + ++ L LA+D YGNYV+QHL+ P ++ + G+ + S +K+ SN
Sbjct: 675 -RSSVYLQLHTQILHLAQDQYGNYVIQHLMKKGSPSEQREIVEVVLGNVLHLSRHKFASN 733
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN-----VSMLLMHPFGNYVIQSALLVSKVRL 437
VVERC+ + R LL + L+ + NYVIQ + VSK L
Sbjct: 734 VVERCISYCSDTDRERFFNSLLGENEDGDTYLLNLIKDKYANYVIQKLIDVSKPEL 789
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 123/261 (47%), Gaps = 17/261 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLP-KEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
++G+++ L+ YGCR Q+ + +P ++E+I E+ V + + D GN+V+QK +E
Sbjct: 575 MKGHVLTLSLQMYGCRVAQKALEHIPLNRQVELI-QELDGDVLKCVKDQNGNHVIQKAIE 633
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
++ + + + L + +G R + +++E+ + + S V L +
Sbjct: 634 CIPYGHLQFVVDAVMPNVYNL---SSHPYGCRVIQRIIEHFADAR--SSVYLQLHTQILH 688
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
L +D G+YVIQ+ +K S + + ++ V N ++ K V++ C+ Y RE
Sbjct: 689 LAQDQYGNYVIQHLMKKGSPSEQREIVEVVLGNVLHLSRHKFASNVVERCISYCSDTDRE 748
Query: 330 RLVAEIIANA-------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
R ++ L L +D Y NYV+Q L+ + P++ ++ L H
Sbjct: 749 RFFNSLLGENEDGDTYLLNLIKDKYANYVIQKLIDVSKPELRDRIITVLNPHLNVLKNYT 808
Query: 383 YGSN---VVERCLLESGEEQS 400
YG + VVE+ + EE S
Sbjct: 809 YGKHLYLVVEKFQRGNAEEPS 829
>gi|346327596|gb|EGX97192.1| Armadillo-type fold domain containing protein [Cordyceps militaris
CM01]
Length = 816
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 156/289 (53%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+++ G+IV + DQ+G R +Q + S +E + +F E+ +LM D FGNYV+QK
Sbjct: 431 LKEVYGHIVEFSGDQHGSRFIQSKLESANSDEKDRVFCEIEPNAIQLMKDVFGNYVIQKF 490
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + ++V + + + R V K LE++ QQ +L L P
Sbjct: 491 FEHGNQVQKKILAEKMRG---KVVDLSVQVYACRVVQKALEHVLVEQQAALT-KELDPEI 546
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ + +D NG++VIQ ++ + ++++ V G+A+ GC V+Q +E+
Sbjct: 547 LRVIRDQNGNHVIQKIIELVPRQYIDFIMDAVRGQVTGLASHTYGCRVIQRMLEHGTDID 606
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ ++ E+ A+A +L D YGNYV QH++ P+ L++ + ++ S +K+ SNV
Sbjct: 607 KLEIMTELHASAQILITDQYGNYVAQHVIQNGKPEDRDKLIQLVMSQLLTLSKHKFASNV 666
Query: 388 VERCLLESGEEQSTRIIIELL------RSPNVSMLLMHPFGNYVIQSAL 430
VE+C+ ++Q + I ++L SP + +++ +GNYVIQ L
Sbjct: 667 VEKCIEHGTQQQRSAIRVQLTTVGPDGTSP-LQLMMRDQYGNYVIQKLL 714
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 97/228 (42%), Gaps = 47/228 (20%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG +V L+ Y CR +Q+ + + E+ + E+ + ++ D GN+V+QK++EL
Sbjct: 506 MRGKVVDLSVQVYACRVVQKALEHVLVEQQAALTKELDPEILRVIRDQNGNHVIQKIIEL 565
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
R I ++ Q+ + +T+G R + ++LE+ T+ ++ ++ L A L
Sbjct: 566 VP---RQYIDFIMDAVRGQVTGLASHTYGCRVIQRMLEHGTDIDKLE-IMTELHASAQIL 621
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS------- 323
D G+YV Q+ +++ ED L+ V ++ K V++ C+E+
Sbjct: 622 ITDQYGNYVAQHVIQNGKPEDRDKLIQLVMSQLLTLSKHKFASNVVEKCIEHGTQQQRSA 681
Query: 324 ------------------------------------KGAQRERLVAEI 335
+GA++E LV EI
Sbjct: 682 IRVQLTTVGPDGTSPLQLMMRDQYGNYVIQKLLGQLQGAEKEILVEEI 729
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 9/160 (5%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG + LA YGCR +QR + + I E+ L+ D +GNYV Q +++
Sbjct: 578 VRGQVTGLASHTYGCRVIQRMLEHGTDIDKLEIMTELHASAQILITDQYGNYVAQHVIQN 637
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ--ISLVLAALRPGAV 268
E R +++ ++ + QL+ + + V K +E+ T Q+ I + L + P
Sbjct: 638 GKPEDRDKLIQLVMS---QLLTLSKHKFASNVVEKCIEHGTQQQRSAIRVQLTTVGPDGT 694
Query: 269 T----LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+ + +D G+YVIQ + + + L+ E+ Y
Sbjct: 695 SPLQLMMRDQYGNYVIQKLLGQLQGAEKEILVEEIKPQFY 734
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 2/135 (1%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
+Y L EV + + D+ G +Q +E + +++R+ EI NA+ L +D +GNYV+
Sbjct: 428 RYDLKEVYGHIVEFSGDQHGSRFIQSKLESANSDEKDRVFCEIEPNAIQLMKDVFGNYVI 487
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q L ++ G V S Y VV++ L EQ + EL P
Sbjct: 488 QKFFEHGNQVQKKILAEKMRGKVVDLSVQVYACRVVQKALEHVLVEQQAALTKEL--DPE 545
Query: 413 VSMLLMHPFGNYVIQ 427
+ ++ GN+VIQ
Sbjct: 546 ILRVIRDQNGNHVIQ 560
>gi|189195550|ref|XP_001934113.1| mRNA binding protein Pumilio 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979992|gb|EDU46618.1| mRNA binding protein Pumilio 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 891
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 161/326 (49%), Gaps = 23/326 (7%)
Query: 110 DGLRSNGNELSSVPRNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQ 169
DGL + ELS+ R Q S +W L D++ ++V A DQ+G R +Q
Sbjct: 485 DGLGAMSIELSNFKREQKQS------KRW--------ELTDIKDHVVEFAGDQHGSRFIQ 530
Query: 170 RTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQ 229
+ + + E E +F E+ + +LM D FGNYV+QK E + Q+ ++ +
Sbjct: 531 QKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGDQVQKKILVGKMKG---H 587
Query: 230 LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSH 289
++ + + R V K LE+ QQ ++V L + KD NG++VIQ +
Sbjct: 588 VLELANQMYACRVVQKALEHALTEQQAAMV-KELEKDVLKTVKDQNGNHVIQKVIDRVPM 646
Query: 290 EDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGN 349
+ + ++ N ++ + GC V+Q +E + QR ++ E+ A L D YGN
Sbjct: 647 QHIQKIVEAFRGNVGVLSVNSYGCRVIQRLLEKVQEPQRRFILTELHAEGPKLITDQYGN 706
Query: 350 YVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLR 409
YV QH++ +P+ A ++ ++ ++ FS +K+ SNVVERCL+ + Q +++ +L
Sbjct: 707 YVTQHVIEHGLPEDRAKIVSLIKAQFLMFSKHKFASNVVERCLICGDDAQRRQLVAVVLS 766
Query: 410 S-----PNVSMLLMHPFGNYVIQSAL 430
NV LL +GNYVIQ L
Sbjct: 767 KNERGETNVMNLLRDGYGNYVIQKLL 792
>gi|336263338|ref|XP_003346449.1| hypothetical protein SMAC_05344 [Sordaria macrospora k-hell]
gi|380089961|emb|CCC12272.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 856
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 152/297 (51%), Gaps = 23/297 (7%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+ ++G+I A D+ G R +Q + S EE +F E+ D + LM D +GNYVVQK
Sbjct: 413 LKQIQGSIADFAADRTGSRFIQEKLQSASSEEKTFVFQELYDELIPLMTDVYGNYVVQKF 472
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++EQ+T++ L++ ++ ++R+ N +G R V K L+N+ + ++ LV + LR
Sbjct: 473 FEHGTQEQKTKMALVIKDN---MLRLSENKYGCRVVQKALDNIFSNYKVELV-SELRGHI 528
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV--ADNCYGIATDKSGCCVLQHCVEYSKG 325
L K G++VIQ +K E+ ++ + +A ++ C V+Q +E+
Sbjct: 529 DKLNKSQEGNHVIQMIIKLLPRENIGFIYDSFRGPGKVMELALNQYACRVIQRTLEHGNE 588
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
R LV+E+ A L D YGNYV QH++ + A ++ + V+ S +K+ S
Sbjct: 589 EDRLYLVSELHKGAHTLITDAYGNYVAQHIIEAGKSEDRARMIATVMSQAVALSTHKHAS 648
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPN----------------VSMLLMHPFGNYVI 426
NVVE+C ++ G + R I ++ +P + L++ F NYVI
Sbjct: 649 NVVEKC-IKYGTPEDVRRIRDMFFNPQDGVGGYSSEQQSPDSFLRYLMLDHFANYVI 704
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 2/135 (1%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
K+ L ++ + A D++G +Q ++ + ++ + E+ + L D YGNYVV
Sbjct: 410 KWDLKQIQGSIADFAADRTGSRFIQEKLQSASSEEKTFVFQELYDELIPLMTDVYGNYVV 469
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q + + ++ + + S NKYG VV++ L ++ EL +
Sbjct: 470 QKFFEHGTQEQKTKMALVIKDNMLRLSENKYGCRVVQKALDNIFSNYKVELVSELRG--H 527
Query: 413 VSMLLMHPFGNYVIQ 427
+ L GN+VIQ
Sbjct: 528 IDKLNKSQEGNHVIQ 542
>gi|126305609|ref|XP_001369426.1| PREDICTED: pumilio homolog 2 isoform 1 [Monodelphis domestica]
Length = 1082
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 162/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 725 RSRLLEDFRNNRFPNLQLRDLLGHIVEFSQDQHGSRFIQQKLERATPTERQMVFNEILQA 784
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E + +Q+ L + T ++ + L +G R + K LE++
Sbjct: 785 AYQLMTDVFGNYVIQKFFEFGNLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 841
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
+ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 842 SPDQQNEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAFKGQVFVLSTHP 900
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P + ++ +
Sbjct: 901 YGCRVIQRILEHCTAEQTLPVLEELHQHTEQLVQDQYGNYVIQHVLEHGRPDDKSKIVAE 960
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 961 IRGKVLALSQHKFASNVVEKCVSHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 1020
Query: 426 IQSAL 430
+Q +
Sbjct: 1021 VQKMI 1025
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSL-PKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
+RG+++ LA YGCR +Q+ + S+ P ++ EM+ E+ V + + D GN+VVQK +E
Sbjct: 817 IRGHVLPLALQMYGCRVIQKALESISPDQQNEMV-KELDGHVLKCVKDQNGNHVVQKCIE 875
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGA 267
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + VL L
Sbjct: 876 -CVQPQALQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-VLEELHQHT 929
Query: 268 VTLTKDTNGHYVIQY------------------------------------CVKHFSHED 291
L +D G+YVIQ+ CV H S +
Sbjct: 930 EQLVQDQYGNYVIQHVLEHGRPDDKSKIVAEIRGKVLALSQHKFASNVVEKCVSHASRAE 989
Query: 292 TKYLLNEVA-------DNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAE 344
L++EV Y + D+ V+Q ++ ++ AQR+ L+ +I + L +
Sbjct: 990 RALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKVLMHKIRPHVTTLRK 1049
Query: 345 DCYGNYVVQHL 355
YG +++ L
Sbjct: 1050 YTYGKHILVKL 1060
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 81/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + L+ YGCR +QR + E+ + E+ +L+
Sbjct: 883 QFIIDAF--------KGQVFVLSTHPYGCRVIQRILEHCTAEQTLPVLEELHQHTEQLVQ 934
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E + +++I+ L L+ F +V C+ +H RA
Sbjct: 935 DQYGNYVIQHVLEHGRPDDKSKIVAEIRGKVLALSQHKFASNVVEKCV-SHASRAERALL 993
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +++ +RP TL K T G
Sbjct: 994 IDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKVLMHKIRPHVTTLRKYTYG 1053
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 1054 KHILVKLEKYY 1064
>gi|72389821|ref|XP_845205.1| pumilio/PUF RNA binding protein 4 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|62359913|gb|AAX80338.1| pumilio/PUF RNA binding protein 4, putative [Trypanosoma brucei]
gi|70801740|gb|AAZ11646.1| pumilio/PUF RNA binding protein 4, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 988
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 142/250 (56%), Gaps = 16/250 (6%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLP--KEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
G IV LA DQ GCR LQ + P E++ + E++ + ++M DP+GN++VQKL+E+
Sbjct: 494 GRIVKLAADQQGCRMLQSVLERFPFHSSEVQKVISELLPVLTDVMKDPYGNFLVQKLLEV 553
Query: 211 CSEEQRTRILLMLTNDDFQ----LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
+E+R R+L D+ L + ++ HG AV KL+++L + Q++ +V AL+ G
Sbjct: 554 APDEERMRLL------DYHISASLCDVAISPHGNYAVQKLIDSLRSSQEVQVVCRALQRG 607
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ L D NG +VIQ ++ S +D +L + + + + DK GCCV+Q C++++
Sbjct: 608 TLQLMTDLNGGHVIQKLLQCISPKDLTFLYDVIVKDTVDVCNDKHGCCVVQKCMDHAINV 667
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQL---EGHYVSFSC-NK 382
+R I+ + L L+ + YGNYVV HL+++ Q ++ + G + C NK
Sbjct: 668 HLQRTQKAILRHMLQLSLNPYGNYVVTHLISMCNSQSQRHVVNEAAHCAGPALELLCANK 727
Query: 383 YGSNVVERCL 392
+ SNVVE+ +
Sbjct: 728 FASNVVEKIV 737
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 100/214 (46%), Gaps = 5/214 (2%)
Query: 216 RTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLT-NPQQISLVLAALRPGAVTLTKDT 274
R+R + + ++V++ + G R + +LE + ++ V++ L P + KD
Sbjct: 482 RSRAPVQMPLHGGRIVKLAADQQGCRMLQSVLERFPFHSSEVQKVISELLPVLTDVMKDP 541
Query: 275 NGHYVIQYCVKHFSHEDTKYLLN-EVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVA 333
G++++Q ++ E+ LL+ ++ + +A G +Q ++ + +Q ++V
Sbjct: 542 YGNFLVQKLLEVAPDEERMRLLDYHISASLCDVAISPHGNYAVQKLIDSLRSSQEVQVVC 601
Query: 334 EIIANALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCL 392
+ L L D G +V+Q LL P+ L + V +K+G VV++C+
Sbjct: 602 RALQRGTLQLMTDLNGGHVIQKLLQCISPKDLTFLYDVIVKDTVDVCNDKHGCCVVQKCM 661
Query: 393 LESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVI 426
+ R +LR ++ L ++P+GNYV+
Sbjct: 662 DHAINVHLQRTQKAILR--HMLQLSLNPYGNYVV 693
>gi|334313569|ref|XP_003339931.1| PREDICTED: pumilio homolog 2 isoform 2 [Monodelphis domestica]
Length = 1002
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 162/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 645 RSRLLEDFRNNRFPNLQLRDLLGHIVEFSQDQHGSRFIQQKLERATPTERQMVFNEILQA 704
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E + +Q+ L + T ++ + L +G R + K LE++
Sbjct: 705 AYQLMTDVFGNYVIQKFFEFGNLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESI 761
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
+ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 762 SPDQQNEMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAFKGQVFVLSTHP 820
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P + ++ +
Sbjct: 821 YGCRVIQRILEHCTAEQTLPVLEELHQHTEQLVQDQYGNYVIQHVLEHGRPDDKSKIVAE 880
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 881 IRGKVLALSQHKFASNVVEKCVSHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 940
Query: 426 IQSAL 430
+Q +
Sbjct: 941 VQKMI 945
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSL-PKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
+RG+++ LA YGCR +Q+ + S+ P ++ EM+ E+ V + + D GN+VVQK +E
Sbjct: 737 IRGHVLPLALQMYGCRVIQKALESISPDQQNEMV-KELDGHVLKCVKDQNGNHVVQKCIE 795
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGA 267
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + VL L
Sbjct: 796 -CVQPQALQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-VLEELHQHT 849
Query: 268 VTLTKDTNGHYVIQY------------------------------------CVKHFSHED 291
L +D G+YVIQ+ CV H S +
Sbjct: 850 EQLVQDQYGNYVIQHVLEHGRPDDKSKIVAEIRGKVLALSQHKFASNVVEKCVSHASRAE 909
Query: 292 TKYLLNEVA-------DNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAE 344
L++EV Y + D+ V+Q ++ ++ AQR+ L+ +I + L +
Sbjct: 910 RALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKVLMHKIRPHVTTLRK 969
Query: 345 DCYGNYVVQHL 355
YG +++ L
Sbjct: 970 YTYGKHILVKL 980
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + L+ YGCR +QR + E+ + E+ +L+ D +GNYV+Q ++E
Sbjct: 809 FKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPVLEELHQHTEQLVQDQYGNYVIQHVLEH 868
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
+ +++I+ L L+ F +V C+ +H RA
Sbjct: 869 GRPDDKSKIVAEIRGKVLALSQHKFASNVVEKCV-SHASRAERALLIDEVCCQNDGPHSA 927
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 928 LYTMMKDQYANYVVQKMIDMAEPAQRKVLMHKIRPHVTTLRKYTYGKHILVKLEKYY 984
>gi|449547439|gb|EMD38407.1| hypothetical protein CERSUDRAFT_82658 [Ceriporiopsis subvermispora
B]
Length = 414
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 164/307 (53%), Gaps = 25/307 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR-VCELMIDPFGNYVVQK 206
LRD+ G +V + DQ+G R +Q+ + + EE +++F E++ +L+ D FGNYVVQK
Sbjct: 66 LRDIFGYVVEFSGDQHGSRFIQQKLETANSEEKQIVFDEIVPHNALQLIQDVFGNYVVQK 125
Query: 207 LVELCSEEQRTRILLMLTND-DFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
L E ++ Q+T ML N + ++ + L +G R V K +E + P+Q S + L
Sbjct: 126 LFEHGTQVQKT----MLANAMEGHVLPLSLQMYGCRVVQKAVEYVL-PEQQSAFVKELDV 180
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
+ KD NG++V+Q ++ + E ++ N Y ++T GC VLQ C E+
Sbjct: 181 NVLRCVKDANGNHVVQKLIERVAPERLTFV-QAFRGNVYELSTHPYGCRVLQRCFEHLPE 239
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
Q L+ E+ + L +D +GNYVVQ +L P A ++ +L G ++ + +K+ S
Sbjct: 240 EQTRPLLDELHKYIINLMQDQFGNYVVQFVLEHGTPHDRAVIISKLRGQMLNMARHKFAS 299
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSAL--------- 430
NV E+ L+ + E +S R++IE + +P + ++ F NYV+Q AL
Sbjct: 300 NVCEKALI-TAESESRRLLIEEIMTPKHDGVSPILAMMKDQFANYVLQRALSVVEGEQKE 358
Query: 431 -LVSKVR 436
L+SKVR
Sbjct: 359 VLISKVR 365
>gi|322702154|gb|EFY93902.1| hypothetical protein MAC_00393 [Metarhizium acridum CQMa 102]
Length = 829
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 152/289 (52%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ ++V + DQ+G R +Q+ + S +E + +F E+ +LM D FGNYVVQK
Sbjct: 431 LKDIYNHVVEFSGDQHGSRFIQQKLESANSDEKDQVFREIEPNAIQLMKDVFGNYVVQKF 490
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + ++V + + + R V K LE++ QQ L L P
Sbjct: 491 FEHGNQVQKKVLAEKMKG---KVVDLSMQVYACRVVQKALEHVLVEQQAELT-KELEPDI 546
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ + +D NG++V+Q ++ + +++N V +A+ GC V+Q +E+ +
Sbjct: 547 LRVIRDQNGNHVVQKIIELVPRQCIDFIMNAVRGQVTALASHTYGCRVIQRMLEHGTESD 606
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ ++ E+ A+A +L D YGNYV QH++ P+ A ++ + ++ S +K+ SNV
Sbjct: 607 KMEIMTELHASAQILITDQYGNYVAQHVIQNGKPEDRARMIDLVMAQLLTLSKHKFASNV 666
Query: 388 VERCLLESGEEQSTRIIIELL------RSPNVSMLLMHPFGNYVIQSAL 430
VE+C+ EQ T I +L SP + ++ +GNYVIQ L
Sbjct: 667 VEKCIEHGTAEQRTSIREQLTTVGSDGTSP-LQQMMRDQYGNYVIQKLL 714
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 2/192 (1%)
Query: 239 GIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNE 298
G+R+VL L+N L + V + D +G IQ ++ + ++ + E
Sbjct: 410 GVRSVLLDEFRLSNKSNKRYELKDIYNHVVEFSGDQHGSRFIQQKLESANSDEKDQVFRE 469
Query: 299 VADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLAL 358
+ N + D G V+Q E+ Q++ L ++ + L+ Y VVQ L
Sbjct: 470 IEPNAIQLMKDVFGNYVVQKFFEHGNQVQKKVLAEKMKGKVVDLSMQVYACRVVQKALEH 529
Query: 359 RVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLM 418
+ + A L ++LE + ++ G++VV++ ++E Q I+ +R V+ L
Sbjct: 530 VLVEQQAELTKELEPDILRVIRDQNGNHVVQK-IIELVPRQCIDFIMNAVRG-QVTALAS 587
Query: 419 HPFGNYVIQSAL 430
H +G VIQ L
Sbjct: 588 HTYGCRVIQRML 599
>gi|414869530|tpg|DAA48087.1| TPA: hypothetical protein ZEAMMB73_002196 [Zea mays]
Length = 1036
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 147/288 (51%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G +V + DQ+G R +Q+ + + EE +F E++ LM D FGNYV+QK
Sbjct: 705 LSDITGRVVEYSADQHGSRFIQQKLENCTAEEKTSVFAEILPHASALMTDVFGNYVIQKF 764
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQR + L ++ + L +G R + K LE + Q+I LV L
Sbjct: 765 FEHGTREQRRDLATKLVG---HVLPLSLQMYGCRVIQKALEVMELDQKIDLV-HELDGHI 820
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG-A 326
+ +D NG++VIQ C++ E ++++ ++ GC V+Q +E+ G +
Sbjct: 821 MRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHPYGCRVIQRILEHCGGNS 880
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q + ++ EI+ +LA+D YGNYV QH+L + ++ +L G V+ S NKY SN
Sbjct: 881 QGQCIIDEILQWVCILAQDQYGNYVTQHVLERGKAHERSQIITKLAGQVVTMSQNKYASN 940
Query: 387 VVERCLLESGEEQST----RIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
V+E+C + RI+ + + N+ ++ + NYV+Q L
Sbjct: 941 VIEKCFQHGDIAERDLLIRRIVEQTEGNNNLLAMMKDQYANYVVQKIL 988
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 7/230 (3%)
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L EL S R ++ L++ ++V + HG R + + LEN T ++ S V A + P
Sbjct: 692 LEELKSNRAR---MVELSDITGRVVEYSADQHGSRFIQQKLENCTAEEKTS-VFAEILPH 747
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
A L D G+YVIQ +H + E + L ++ + ++ GC V+Q +E +
Sbjct: 748 ASALMTDVFGNYVIQKFFEHGTREQRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELD 807
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q+ LV E+ + + D GN+V+Q + + ++ +G S S + YG
Sbjct: 808 QKIDLVHELDGHIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHPYGCR 867
Query: 387 VVERCLLE-SGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKV 435
V++R L G Q II E+L+ V +L +GNYV Q L K
Sbjct: 868 VIQRILEHCGGNSQGQCIIDEILQW--VCILAQDQYGNYVTQHVLERGKA 915
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 98/220 (44%), Gaps = 15/220 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ +L G+I+ +DQ G +Q+ + +P E I + +V L + P+G V+Q++
Sbjct: 813 VHELDGHIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHPYGCRVIQRI 872
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICL---NTHGIRAVLKLLENLTNPQQISLVLAALR 264
+E C + + ++ D L +C+ + +G +LE + S ++ L
Sbjct: 873 LEHCGGNSQGQCII-----DEILQWVCILAQDQYGNYVTQHVLER-GKAHERSQIITKLA 926
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG------IATDKSGCCVLQH 318
VT++++ VI+ C +H + L+ + + G + D+ V+Q
Sbjct: 927 GQVVTMSQNKYASNVIEKCFQHGDIAERDLLIRRIVEQTEGNNNLLAMMKDQYANYVVQK 986
Query: 319 CVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLAL 358
+E QRE L++ + + L + YG ++V + L
Sbjct: 987 ILETCNEDQRELLLSRVKDHMQALRKYTYGKHIVSRVEQL 1026
>gi|156839900|ref|XP_001643636.1| hypothetical protein Kpol_478p14 [Vanderwaltozyma polyspora DSM
70294]
gi|156114255|gb|EDO15778.1| hypothetical protein Kpol_478p14 [Vanderwaltozyma polyspora DSM
70294]
Length = 841
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 161/310 (51%), Gaps = 27/310 (8%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
+L+D+ G ++ KDQ+G R +Q+ ++ + E E+IF E+ D + EL D FGNYV+QK
Sbjct: 491 TLKDIFGYVLEFCKDQHGSRFIQQELAVVTPSEREVIFNEIRDHILELSDDVFGNYVIQK 550
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E SE Q+ ++ N ++ ++ + + R + + LE + Q+I LVL L
Sbjct: 551 FFEYGSETQKNILVDQFRN---RMQKLSMQMYACRVIQRALEFIELQQRIDLVL-ELADC 606
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ + KD NG++VIQ ++ + ++L+ + Y ++T GC V+Q +E+
Sbjct: 607 VLPMIKDQNGNHVIQKAIERIPIDKLPFILDSLKGQIYHLSTHAYGCRVIQRLLEFGSKD 666
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALR------------VPQITASLLRQLEGH 374
+ R++ E+ L +D YGNYV+QH+L + + + ++ + +
Sbjct: 667 DQTRILEELHDFIPYLIQDQYGNYVIQHILQQKDEDLMKENMSPSIAKAKQEIVDIVSEN 726
Query: 375 YVSFSCNKYGSNVVERCLLESGEEQ----STRIIIELLR-----SPNVSMLLM--HPFGN 423
V FS +K+ SNVVE+ +L E+Q +++II L N M+LM F N
Sbjct: 727 VVEFSKHKFASNVVEKTILHGNEKQRNAVTSKIIPRDLEHAANLEDNAPMILMMRDQFAN 786
Query: 424 YVIQSALLVS 433
YV+Q + V+
Sbjct: 787 YVVQKLVSVT 796
>gi|293331587|ref|NP_001169459.1| uncharacterized protein LOC100383330 [Zea mays]
gi|224029501|gb|ACN33826.1| unknown [Zea mays]
Length = 453
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 150/289 (51%), Gaps = 6/289 (2%)
Query: 144 DCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYV 203
D L DL G++ ++ DQYG R +Q+ + ++ E IF E++ L D FGNYV
Sbjct: 101 DSVELIDLVGHVKEISMDQYGSRFIQQKLEIASLDDREKIFPEILSNAIALTTDVFGNYV 160
Query: 204 VQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL 263
+QK E +E Q ++ L ++ + L +G R V K+LE + ++I +V L
Sbjct: 161 IQKFFEFATERQLIQLADQLKG---HILELSLQMYGCRVVQKVLEVVDKDRKIDIV-HEL 216
Query: 264 RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
R + D NG++VIQ C++ + ++++ + + T + GC V+Q +E+
Sbjct: 217 RNHILKCIGDQNGNHVIQKCIECVPEDRIPFVIDPILSQILVLCTHQYGCRVIQRVLEHC 276
Query: 324 KG-AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ + EI+ L +D +GNYVVQH+L P+ ++++++L G V S K
Sbjct: 277 HDPVTQSATMNEIVQQTFHLTDDKFGNYVVQHVLKHGKPEERSAIIQKLSGQVVILSKLK 336
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHP-FGNYVIQSAL 430
Y SNV+E+CL E+ +I E++ S LM FGNYV+Q L
Sbjct: 337 YASNVIEKCLEFGTLEERDSLIGEIISSGQTFQELMKDQFGNYVVQKVL 385
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 133/255 (52%), Gaps = 8/255 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L+G+I+ L+ YGCR +Q+ + + K+ I E+ + + + + D GN+V+QK +E
Sbjct: 180 LKGHILELSLQMYGCRVVQKVLEVVDKDRKIDIVHELRNHILKCIGDQNGNHVIQKCIEC 239
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E+ RI ++ Q++ +C + +G R + ++LE+ +P S + + L
Sbjct: 240 VPED---RIPFVIDPILSQILVLCTHQYGCRVIQRVLEHCHDPVTQSATMNEIVQQTFHL 296
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
T D G+YV+Q+ +KH E+ ++ +++ ++ K V++ C+E+ +R+
Sbjct: 297 TDDKFGNYVVQHVLKHGKPEERSAIIQKLSGQVVILSKLKYASNVIEKCLEFGTLEERDS 356
Query: 331 LVAEIIANALLLAE---DCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
L+ EII++ E D +GNYVVQ +L + +L ++ H YG ++
Sbjct: 357 LIGEIISSGQTFQELMKDQFGNYVVQKVLKTCDERYLEMILSSIKLHLNELKNYTYGKHI 416
Query: 388 VERC--LLESGEEQS 400
V R L+ +GEE++
Sbjct: 417 VTRVEKLIVTGEERA 431
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR---VCELMIDPFGNYVV 204
++ L G +V L+K +Y +++ + EE + + E+I ELM D FGNYVV
Sbjct: 322 IQKLSGQVVILSKLKYASNVIEKCLEFGTLEERDSLIGEIISSGQTFQELMKDQFGNYVV 381
Query: 205 QKLVELCSEEQRTRIL 220
QK+++ C E IL
Sbjct: 382 QKVLKTCDERYLEMIL 397
>gi|168030344|ref|XP_001767683.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681003|gb|EDQ67434.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1085
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 144/262 (54%), Gaps = 5/262 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G++V + DQ+G R +Q+ + + E+ M+F EV+ R LM D FGNYV+QK
Sbjct: 799 LSDIAGHVVEFSADQHGSRFIQQKLETATLEDKNMVFQEVLPRALVLMTDVFGNYVIQKF 858
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + +QR + L + Q++ + L +G R + K LE + QQ LV + L
Sbjct: 859 FEHGTHQQRRELASKL---EGQVLVLSLQMYGCRVIQKALEVVDVDQQTQLV-SELDGNV 914
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ C++ ++++ + ++T GC V+Q +E+ Q
Sbjct: 915 MRCVRDQNGNHVIQKCIECVPPAKIHFIISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQ 974
Query: 328 RER-LVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+++ ++ EI+ + LA+D YGNYVVQH+L + ++ +L G V S +K+ SN
Sbjct: 975 KQKGIMEEILRSTCTLAQDQYGNYVVQHVLEHGRDHERSEIITKLAGQIVQMSQHKFASN 1034
Query: 387 VVERCLLESGEEQSTRIIIELL 408
VVE+CL G + +I E+L
Sbjct: 1035 VVEKCLEYGGPVERQILIDEML 1056
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 111/243 (45%), Gaps = 14/243 (5%)
Query: 199 FGNYVVQKLVELCSEEQRTRILLMLTNDD---FQL-------VRICLNTHGIRAVLKLLE 248
+ + QK E E + + +L N F+L V + HG R + + LE
Sbjct: 765 YAGWQGQKTGETTEESRGSTLLEEFKNSKTRRFELSDIAGHVVEFSADQHGSRFIQQKLE 824
Query: 249 NLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIAT 308
T + ++V + P A+ L D G+YVIQ +H +H+ + L +++ ++
Sbjct: 825 TATL-EDKNMVFQEVLPRALVLMTDVFGNYVIQKFFEHGTHQQRRELASKLEGQVLVLSL 883
Query: 309 DKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLL 368
GC V+Q +E Q+ +LV+E+ N + D GN+V+Q + P ++
Sbjct: 884 QMYGCRVIQKALEVVDVDQQTQLVSELDGNVMRCVRDQNGNHVIQKCIECVPPAKIHFII 943
Query: 369 RQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIII-ELLRSPNVSMLLMHPFGNYVIQ 427
V+ S + YG V++R L +EQ + I+ E+LRS L +GNYV+Q
Sbjct: 944 SAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQKQKGIMEEILRS--TCTLAQDQYGNYVVQ 1001
Query: 428 SAL 430
L
Sbjct: 1002 HVL 1004
>gi|414869535|tpg|DAA48092.1| TPA: hypothetical protein ZEAMMB73_002196 [Zea mays]
Length = 1043
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 147/288 (51%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G +V + DQ+G R +Q+ + + EE +F E++ LM D FGNYV+QK
Sbjct: 712 LSDITGRVVEYSADQHGSRFIQQKLENCTAEEKTSVFAEILPHASALMTDVFGNYVIQKF 771
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQR + L ++ + L +G R + K LE + Q+I LV L
Sbjct: 772 FEHGTREQRRDLATKLVG---HVLPLSLQMYGCRVIQKALEVMELDQKIDLV-HELDGHI 827
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG-A 326
+ +D NG++VIQ C++ E ++++ ++ GC V+Q +E+ G +
Sbjct: 828 MRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHPYGCRVIQRILEHCGGNS 887
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q + ++ EI+ +LA+D YGNYV QH+L + ++ +L G V+ S NKY SN
Sbjct: 888 QGQCIIDEILQWVCILAQDQYGNYVTQHVLERGKAHERSQIITKLAGQVVTMSQNKYASN 947
Query: 387 VVERCLLESGEEQST----RIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
V+E+C + RI+ + + N+ ++ + NYV+Q L
Sbjct: 948 VIEKCFQHGDIAERDLLIRRIVEQTEGNNNLLAMMKDQYANYVVQKIL 995
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 7/230 (3%)
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L EL S R ++ L++ ++V + HG R + + LEN T ++ S V A + P
Sbjct: 699 LEELKSNRAR---MVELSDITGRVVEYSADQHGSRFIQQKLENCTAEEKTS-VFAEILPH 754
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
A L D G+YVIQ +H + E + L ++ + ++ GC V+Q +E +
Sbjct: 755 ASALMTDVFGNYVIQKFFEHGTREQRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELD 814
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q+ LV E+ + + D GN+V+Q + + ++ +G S S + YG
Sbjct: 815 QKIDLVHELDGHIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHPYGCR 874
Query: 387 VVERCLLE-SGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKV 435
V++R L G Q II E+L+ V +L +GNYV Q L K
Sbjct: 875 VIQRILEHCGGNSQGQCIIDEILQW--VCILAQDQYGNYVTQHVLERGKA 922
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 98/220 (44%), Gaps = 15/220 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ +L G+I+ +DQ G +Q+ + +P E I + +V L + P+G V+Q++
Sbjct: 820 VHELDGHIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHPYGCRVIQRI 879
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICL---NTHGIRAVLKLLENLTNPQQISLVLAALR 264
+E C + + ++ D L +C+ + +G +LE + S ++ L
Sbjct: 880 LEHCGGNSQGQCII-----DEILQWVCILAQDQYGNYVTQHVLER-GKAHERSQIITKLA 933
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG------IATDKSGCCVLQH 318
VT++++ VI+ C +H + L+ + + G + D+ V+Q
Sbjct: 934 GQVVTMSQNKYASNVIEKCFQHGDIAERDLLIRRIVEQTEGNNNLLAMMKDQYANYVVQK 993
Query: 319 CVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLAL 358
+E QRE L++ + + L + YG ++V + L
Sbjct: 994 ILETCNEDQRELLLSRVKDHMQALRKYTYGKHIVSRVEQL 1033
>gi|12082247|dbj|BAB20864.1| pumilio [Xenopus laevis]
Length = 576
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 165/310 (53%), Gaps = 13/310 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +++F E++
Sbjct: 217 RSRLLEDFRNNRFPNLQLRDLMGHIVEFSQDQHGSRFIQQKLERASPAERQLVFNEILQA 276
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM+D GNYV+QK E S EQ+ L + ++ + L +G R + K LE +
Sbjct: 277 AYQLMVDVIGNYVIQKFFEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFI 333
Query: 251 TNPQQ-ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATD 309
QQ I+ ++ L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 334 PPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKSQVFALSTH 393
Query: 310 KSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLR 369
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++
Sbjct: 394 PYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVA 453
Query: 370 QLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLR---SPNVSMLLMHP--FGNY 424
++ G+ + S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NY
Sbjct: 454 EIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANY 513
Query: 425 VIQSALLVSK 434
V+Q + V++
Sbjct: 514 VVQKMIDVAE 523
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 136/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 287 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRE 346
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 347 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKSQVFALSTHPYGCRVIQ 401
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P+Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 402 RILEHCL-PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 460
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 461 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 520
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 521 VAEPAQRKIVMHKIRPHIATLRKYTYGKHILAK 553
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F + + AL+ YGCR +QR + E+ I E+ +L+
Sbjct: 377 QFIIDAF--------KSQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQ 428
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L+L+ F +V C+ TH R
Sbjct: 429 DQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAML 487
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +V+ +RP TL K T G
Sbjct: 488 IDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYG 547
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 548 KHILAKLEKYY 558
>gi|353242398|emb|CCA74046.1| related to PUF3-transcript-specific regulator of mRNA degradation
[Piriformospora indica DSM 11827]
Length = 684
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 164/306 (53%), Gaps = 14/306 (4%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI--DRVCELMIDPFG 200
F L+D+ G+ V + DQ+G R +Q+ + + +E + +F EVI L D FG
Sbjct: 316 FKRFELKDVFGHCVEFSTDQHGSRFIQQKLDTASSDERQAVFDEVIPAGNFSVLAFDVFG 375
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVL 260
NYV+QKL E S R L+ + + ++++ L+ +G R V K L+ T PQQ + V+
Sbjct: 376 NYVIQKLFEYGSPLHRR---LLCSAMEGHVLQLSLDMYGCRVVQKALDCGT-PQQQAAVV 431
Query: 261 AALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCV 320
+ L + KD NG++VIQ ++ LL+ + N +A+ GC VLQ +
Sbjct: 432 SELNGHVLQCVKDANGNHVIQKIME-LVPSQRNVLLDAFSGNVRNLASHPYGCRVLQRSI 490
Query: 321 EYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSC 380
E++ + L+ E+ N+ LL +D +GNYVVQ++L P ++ L G+ +S +
Sbjct: 491 EHAAPEETASLLEELHQNSSLLMQDQFGNYVVQYILEHGAPAHRDRMIDSLRGNVLSMAR 550
Query: 381 NKYGSNVVERCLLESGEEQSTRIIIELL------RSPNVSMLLMHPFGNYVIQSALLVSK 434
+K+ SNV E+ LL S + Q +I E+L SP VS+++ + NYV+Q A+ +S+
Sbjct: 551 HKFASNVCEKALLVSNDVQRRALIEEMLAPMSNGTSP-VSIMMKDQYANYVLQKAISLSE 609
Query: 435 VRLFSS 440
L +
Sbjct: 610 PELLQA 615
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 4/144 (2%)
Query: 289 HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEII--ANALLLAEDC 346
H+ ++ L +V +C +TD+ G +Q ++ + +R+ + E+I N +LA D
Sbjct: 314 HKFKRFELKDVFGHCVEFSTDQHGSRFIQQKLDTASSDERQAVFDEVIPAGNFSVLAFDV 373
Query: 347 YGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIE 406
+GNYV+Q L P L +EGH + S + YG VV++ L +Q ++ E
Sbjct: 374 FGNYVIQKLFEYGSPLHRRLLCSAMEGHVLQLSLDMYGCRVVQKALDCGTPQQQAAVVSE 433
Query: 407 LLRSPNVSMLLMHPFGNYVIQSAL 430
L + +V + GN+VIQ +
Sbjct: 434 L--NGHVLQCVKDANGNHVIQKIM 455
>gi|15131678|emb|CAC48394.1| putative RNA binding protein [Saprolegnia parasitica]
Length = 773
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 156/297 (52%), Gaps = 15/297 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D RG++V AKDQ+G R +Q+ + + + +++F E+ LM D FGNYV+QK
Sbjct: 440 LLDARGHMVEFAKDQHGSRFIQQKLETAKADIKDIVFAEIYPVALTLMTDVFGNYVIQKF 499
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+ + + +L ++ +++ + L +G R + K LE P+++ L+ + L
Sbjct: 500 FDFGTSHHLSLLLRTISG---RVLELALQMYGCRVIQKALELKNMPEKLHLI-SELTGHV 555
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDT------KYLLNEVADNCYGIATDKSGCCVLQHCVE 321
+ KD NG++V+Q C++ + ++L+ N Y +AT GC V+Q +E
Sbjct: 556 LKCVKDQNGNHVVQKCIEILPWKTPVAMDVGGFILSAFLGNVYSLATHPYGCRVIQRVLE 615
Query: 322 YSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
+ AQ ++ EI LL ED YGNYV+QH+L P + ++ ++ V FS +
Sbjct: 616 HCTEAQMAPILKEIHDCCCLLVEDQYGNYVIQHVLEHGQPSERSQVINKVYPDIVRFSYH 675
Query: 382 KYGSNVVERCLLESGEEQSTRIIIELLRSPN-----VSMLLMHPFGNYVIQSALLVS 433
K+ SNV+E+CL+ + Q I+ ++ + + +++ + NYV+Q + V+
Sbjct: 676 KFASNVIEKCLMYASVHQLHVIVAHVMEANERGECPLQVMMKDQYANYVVQKLIDVA 732
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
K+ L + + A D+ G +Q +E +K ++ + AEI AL L D +GNYV+
Sbjct: 437 KWELLDARGHMVEFAKDQHGSRFIQQKLETAKADIKDIVFAEIYPVALTLMTDVFGNYVI 496
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q + LLR + G + + YG V+++ L + +I EL + +
Sbjct: 497 QKFFDFGTSHHLSLLLRTISGRVLELALQMYGCRVIQKALELKNMPEKLHLISEL--TGH 554
Query: 413 VSMLLMHPFGNYVIQSALLV 432
V + GN+V+Q + +
Sbjct: 555 VLKCVKDQNGNHVVQKCIEI 574
>gi|395508974|ref|XP_003758782.1| PREDICTED: pumilio homolog 2 isoform 1 [Sarcophilus harrisii]
Length = 1082
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 162/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 725 RSRLLEDFRNNRFPNLQLRDLMGHIVEFSQDQHGSRFIQQKLERATPTERQMVFNEILQA 784
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E + +Q+ L + T ++ + L +G R + K LE++
Sbjct: 785 AYQLMTDVFGNYVIQKFFEFGNLDQK---LSLTTRIRGHVLPLALQMYGCRVIQKALESI 841
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
+ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 842 SPDQQNDMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAFKGQVFVLSTHP 900
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P + ++ +
Sbjct: 901 YGCRVIQRILEHCTVEQTLPVLEELHQHTEQLVQDQYGNYVIQHVLEHGRPDDKSKIVSE 960
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 961 IRGKVLTLSQHKFASNVVEKCVSHASRAERALLIDEICCQNDGPHSALYTMMKDQYANYV 1020
Query: 426 IQSAL 430
+Q +
Sbjct: 1021 VQKMI 1025
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 125/247 (50%), Gaps = 15/247 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 817 IRGHVLPLALQMYGCRVIQKALESISPDQQNDMVKELDGHVLKCVKDQNGNHVVQKCIE- 875
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + VL L
Sbjct: 876 CVQPQALQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTVEQTLP-VLEELHQHTE 930
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H +D +++E+ ++ K V++ CV ++ A+R
Sbjct: 931 QLVQDQYGNYVIQHVLEHGRPDDKSKIVSEIRGKVLTLSQHKFASNVVEKCVSHASRAER 990
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ EI + + +D Y NYVVQ ++ + P L+ ++ H +
Sbjct: 991 ALLIDEICCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPGQRKVLMHKIRPHVTTLRKY 1050
Query: 382 KYGSNVV 388
YG +++
Sbjct: 1051 TYGKHIL 1057
>gi|357492315|ref|XP_003616446.1| Pumilio-like protein [Medicago truncatula]
gi|355517781|gb|AES99404.1| Pumilio-like protein [Medicago truncatula]
Length = 1066
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 181/396 (45%), Gaps = 50/396 (12%)
Query: 77 PLVENGFFSHPCQEAEPINQDSSILNLLHNHNFDGLRSNGNELSSVPRNQWMSSLSLKRN 136
PL + F S P++Q + L G+R+ + + +SSL
Sbjct: 620 PLAGSPFPSSMYGPGSPMSQSERNMRLAA-----GMRNVAGVFTGAWHSDAVSSLDENFP 674
Query: 137 QWLQDSFD-----CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRV 191
L D F C L ++ G++V + DQYG R +Q+ + + EE M+F E++ +
Sbjct: 675 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETASMEEKTMVFNEIMPKA 734
Query: 192 CELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKL----- 246
LM D FGNYVVQK E + EQ + LT ++ + L +G R + K
Sbjct: 735 LTLMTDVFGNYVVQKFFEHGTAEQIRELADQLTG---HVLTLSLQMYGCRVIQKQSHYAK 791
Query: 247 ----LENLTNP---------------QQISLVLAALRPGAVT--------LTKDTNGHYV 279
E + P Q I +V + VT +D NG++V
Sbjct: 792 GARKYEVVGRPDGFPRLLIFFSFYIVQAIEVVNLDQKTKMVTELDGHIMRCVRDQNGNHV 851
Query: 280 IQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVA-EIIAN 338
IQ C++ ++ K++++ D ++T GC V+Q +EY + ++++ EI+
Sbjct: 852 IQKCIECVPEDEIKFIVSTFYDQVVTLSTHPYGCRVIQRVLEYCHDPKTQQIMMDEILQC 911
Query: 339 ALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEE 398
+LA+D YGNYVVQH+L P +++++ G V S K+ SNV+E+CL
Sbjct: 912 VSMLAQDQYGNYVVQHVLEHGKPHERTAIIKEFTGQIVQMSQQKFASNVIEKCLSFGTPT 971
Query: 399 QSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
+ ++ E++ S + + +++ F NYV+Q L
Sbjct: 972 ERQVLVNEMIGSTDDNEPLQVMMKDQFANYVVQKVL 1007
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 129/288 (44%), Gaps = 44/288 (15%)
Query: 151 LRGNIVALAKDQYGCRHLQRTM---------------SSLPKEEIEMIF-----VEVID- 189
L G+++ L+ YGCR +Q+ P+ I F +EV++
Sbjct: 766 LTGHVLTLSLQMYGCRVIQKQSHYAKGARKYEVVGRPDGFPRLLIFFSFYIVQAIEVVNL 825
Query: 190 -----RVCEL-------MIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNT 237
V EL + D GN+V+QK +E C E + ++ D Q+V + +
Sbjct: 826 DQKTKMVTELDGHIMRCVRDQNGNHVIQKCIE-CVPEDEIKFIVSTFYD--QVVTLSTHP 882
Query: 238 HGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLN 297
+G R + ++LE +P+ +++ + L +D G+YV+Q+ ++H + ++
Sbjct: 883 YGCRVIQRVLEYCHDPKTQQIMMDEILQCVSMLAQDQYGNYVVQHVLEHGKPHERTAIIK 942
Query: 298 EVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANA------LLLAEDCYGNYV 351
E ++ K V++ C+ + +R+ LV E+I + ++ +D + NYV
Sbjct: 943 EFTGQIVQMSQQKFASNVIEKCLSFGTPTERQVLVNEMIGSTDDNEPLQVMMKDQFANYV 1002
Query: 352 VQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERC--LLESGE 397
VQ +L Q +L +++ H + YG ++V R L+ +GE
Sbjct: 1003 VQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGE 1050
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++ G IV +++ ++ +++ +S E +++ E+I + +M D F N
Sbjct: 941 IKEFTGQIVQMSQQKFASNVIEKCLSFGTPTERQVLVNEMIGSTDDNEPLQVMMKDQFAN 1000
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++Q IL + L + H + V KL+
Sbjct: 1001 YVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLV 1046
>gi|349916591|dbj|GAA27968.1| pumilio homolog 1 [Clonorchis sinensis]
Length = 1618
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 158/302 (52%), Gaps = 14/302 (4%)
Query: 111 GLRSNGNELSSVP--RNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHL 168
GL +G S++P R++ + R WL +LRDL +IV A+DQYG R +
Sbjct: 991 GLVPSGTS-STLPTDRSRLLDEFRNGRLPWL-------TLRDLTNHIVEFAQDQYGSRFI 1042
Query: 169 QRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDF 228
Q+ + + +F E++ LM+D FGNYV+QK EL + EQ+ + +
Sbjct: 1043 QQKLEQASAVDKTAVFREILPHAYSLMVDVFGNYVIQKFFELGTPEQKQILGQRIRG--- 1099
Query: 229 QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFS 288
Q++ + L +G R + K +E++ Q++++ L + KD NG++V+Q C++
Sbjct: 1100 QVLTLSLQMYGCRVIQKAVESVPLDMQVAIIRE-LDGCVIKCVKDQNGNHVVQKCIESVP 1158
Query: 289 HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYG 348
E +++++ +N I+T GC V+Q +E+ Q ++AE+ + L +D YG
Sbjct: 1159 PEHLQFIVDSFTNNVQSISTHSYGCRVIQRILEHCTPEQTAPILAELHQHTESLVKDQYG 1218
Query: 349 NYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL 408
NYV+QH+L + + ++ ++G S +K+ SNVVE+ + + + +I E+L
Sbjct: 1219 NYVIQHVLEHGKTEDKSRIVDLIKGRVAELSVHKFASNVVEKAVANATRAERHSLINEVL 1278
Query: 409 RS 410
S
Sbjct: 1279 ES 1280
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 128/277 (46%), Gaps = 41/277 (14%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG ++ L+ YGCR +Q+ + S+P + I E+ V + + D GN+VVQK +E
Sbjct: 1097 IRGQVLTLSLQMYGCRVIQKAVESVPLDMQVAIIRELDGCVIKCVKDQNGNHVVQKCIES 1156
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E I+ TN+ + I +++G R + ++LE+ T P+Q + +LA L +L
Sbjct: 1157 VPPEHLQFIVDSFTNN---VQSISTHSYGCRVIQRILEHCT-PEQTAPILAELHQHTESL 1212
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
KD G+YVIQ+ ++H ED +++ + ++ K V++ V + A+R
Sbjct: 1213 VKDQYGNYVIQHVLEHGKTEDKSRIVDLIKGRVAELSVHKFASNVVEKAVANATRAERHS 1272
Query: 331 LVAEIIAN----------------AL---------------------LLAEDCYGNYVVQ 353
L+ E++ + AL ++ +D Y NYVVQ
Sbjct: 1273 LINEVLESNYPTDPNDRPRSGDFLALSGSSDGGGSADEPHGNTSILCMMMKDQYANYVVQ 1332
Query: 354 HLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+L + I L+ Q+ H S YG +++ +
Sbjct: 1333 KMLDVAEQPIRKELMNQIRPHLNSLRKYTYGKHIINK 1369
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 359 RVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLM 418
R+P +T LR L H V F+ ++YGS +++ L ++ T + E+L P+ L++
Sbjct: 1016 RLPWLT---LRDLTNHIVEFAQDQYGSRFIQQKLEQASAVDKTAVFREIL--PHAYSLMV 1070
Query: 419 HPFGNYVIQ 427
FGNYVIQ
Sbjct: 1071 DVFGNYVIQ 1079
>gi|224100489|ref|XP_002311896.1| predicted protein [Populus trichocarpa]
gi|222851716|gb|EEE89263.1| predicted protein [Populus trichocarpa]
Length = 339
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 150/278 (53%), Gaps = 9/278 (3%)
Query: 161 DQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRIL 220
DQ+G R +Q+ + + EE E +F EV+ +LM D FGNYV+QK E S EQR +
Sbjct: 21 DQHGSRFIQQKLENCNVEEKESVFKEVLPHAPKLMTDVFGNYVIQKFFEHGSPEQRMELA 80
Query: 221 LMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVI 280
L+ Q++++ L +G R + K LE + Q+ L L + D NG++VI
Sbjct: 81 EKLSG---QILQLSLQMYGCRVIQKALEVIELDQKAKLA-QELDGHVMRCVHDQNGNHVI 136
Query: 281 QYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGAQRERLVAEIIANA 339
Q C++ E +++++ ++T GC V+Q +E+ S Q + +V EI+ ++
Sbjct: 137 QKCIECVPAEHIEFIISAFRGQVVTLSTHPYGCRVIQRVLEHCSDELQSQCIVDEILESS 196
Query: 340 LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQ 399
LLA+D YGNYV QH+L P + ++ +L G V S +KY SNVVE+CL + +
Sbjct: 197 YLLAQDQYGNYVTQHVLERGKPHERSQIISKLTGKIVQMSQHKYASNVVEKCLKHADAAE 256
Query: 400 STRIIIELL----RSPNVSMLLMHPFGNYVIQSALLVS 433
+I E++ + N+ +++ F NYV+Q L S
Sbjct: 257 RELMIGEIIGQSEENDNLLIMMKDQFANYVVQKILETS 294
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 122/246 (49%), Gaps = 9/246 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G I+ L+ YGCR +Q+ + + ++ + E+ V + D GN+V+QK +E
Sbjct: 83 LSGQILQLSLQMYGCRVIQKALEVIELDQKAKLAQELDGHVMRCVHDQNGNHVIQKCIEC 142
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E I +++ Q+V + + +G R + ++LE+ ++ Q ++ + + L
Sbjct: 143 VPAE---HIEFIISAFRGQVVTLSTHPYGCRVIQRVLEHCSDELQSQCIVDEILESSYLL 199
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YV Q+ ++ + +++++ ++ K V++ C++++ A+RE
Sbjct: 200 AQDQYGNYVTQHVLERGKPHERSQIISKLTGKIVQMSQHKYASNVVEKCLKHADAAEREL 259
Query: 331 LVAEIIA------NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
++ EII N L++ +D + NYVVQ +L + LL ++ H + YG
Sbjct: 260 MIGEIIGQSEENDNLLIMMKDQFANYVVQKILETSNDKQKEILLSRINAHLNALKKYTYG 319
Query: 385 SNVVER 390
++V R
Sbjct: 320 KHIVAR 325
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Query: 304 YGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQI 363
+G D+ G +Q +E ++E + E++ +A L D +GNYV+Q P+
Sbjct: 16 HGDDVDQHGSRFIQQKLENCNVEEKESVFKEVLPHAPKLMTDVFGNYVIQKFFEHGSPEQ 75
Query: 364 TASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGN 423
L +L G + S YG V+++ L +Q ++ EL +V + GN
Sbjct: 76 RMELAEKLSGQILQLSLQMYGCRVIQKALEVIELDQKAKLAQEL--DGHVMRCVHDQNGN 133
Query: 424 YVIQSAL 430
+VIQ +
Sbjct: 134 HVIQKCI 140
>gi|350636136|gb|EHA24496.1| translation repression protein [Aspergillus niger ATCC 1015]
Length = 894
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 153/289 (52%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+IV + DQ+G R +Q+ + + +E E +F E+ +LM D FGNYVVQKL
Sbjct: 472 LKDIYGHIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNYVVQKL 531
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ ++ ++ + +G R V K LE++ QQ S+V L
Sbjct: 532 FEHGNQTQKK---ILANQMKGHILSLSTQMYGCRVVQKALEHILTDQQASMV-KELENHV 587
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ ++ + ++++N +AT GC V+Q +E+ +
Sbjct: 588 LRCVRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVERLATHPYGCRVIQRMLEHCEEVD 647
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
RE ++ E+ A L D +GNYV+QH++ + + ++ + +++S +K+ SNV
Sbjct: 648 RESILGELHACTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMSQLLTYSKHKFASNV 707
Query: 388 VERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSAL 430
VE+ +E GEE R +I L S N + L+ +GNYVIQ L
Sbjct: 708 VEKS-IEYGEESQRRQMISTLTSVNERGDSSLISLMRDQYGNYVIQKIL 755
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ +Y L ++ + + D+ G +Q +E + ++E++ EI +N+L L D +GNY
Sbjct: 467 NKRYELKDIYGHIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNY 526
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
VVQ L L Q++GH +S S YG VV++ L +Q ++ EL
Sbjct: 527 VVQKLFEHGNQTQKKILANQMKGHILSLSTQMYGCRVVQKALEHILTDQQASMVKELEN- 585
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 586 -HVLRCVRDQNGNHVIQKAI 604
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 91/220 (41%), Gaps = 47/220 (21%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
S +++L +++ +DQ G +Q+ + +P + ++ I +V L P+G V+
Sbjct: 577 ASMVKELENHVLRCVRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVERLATHPYGCRVI 636
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
Q+++E C E R IL L C +
Sbjct: 637 QRMLEHCEEVDRESILGEL--------HACTS---------------------------- 660
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
L D G+YVIQ+ +++ +D ++ V + K V++ +EY +
Sbjct: 661 ----KLITDQFGNYVIQHVIENGEDKDRSRMIVVVMSQLLTYSKHKFASNVVEKSIEYGE 716
Query: 325 GAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLA 357
+QR ++++ + ++ + L D YGNYV+Q +L
Sbjct: 717 ESQRRQMISTLTSVNERGDSSLISLMRDQYGNYVIQKILG 756
>gi|336367609|gb|EGN95953.1| hypothetical protein SERLA73DRAFT_111921 [Serpula lacrymans var.
lacrymans S7.3]
Length = 372
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 157/292 (53%), Gaps = 13/292 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI-DRVCELMIDPFGNYVVQK 206
LRD+ G +V + DQ+G R +Q+ + + EE +++F E++ + +L+ D FGNYV+QK
Sbjct: 33 LRDIFGYVVEFSGDQHGSRFIQQKLETATSEEKQLMFDEIVPNNTLQLIQDVFGNYVIQK 92
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L E ++ Q+T ++ + ++ + L +G R V K +E + P+Q + L P
Sbjct: 93 LFEHGTQVQKT---VLANTMEGHVLPLSLQMYGCRVVQKAVEYVL-PEQQGAFVKELEPH 148
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++VIQ ++ S E ++ N N Y ++T GC VLQ C E+
Sbjct: 149 VLKCVKDANGNHVIQKLIERVSPERLAFI-NSFRGNVYDLSTHPYGCRVLQRCFEHLPED 207
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q L+ E+ + L +D +GNYVVQ +L A ++ +L G + + +K+ SN
Sbjct: 208 QTRPLLDELHRYMINLMQDQFGNYVVQFVLEHGKATDRAQVILKLRGQILQMARHKFASN 267
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSALLV 432
V E+ L+ + + S RI+IE + +P + ++ F NYV+Q AL V
Sbjct: 268 VCEKALM-TADADSRRILIEEIMTPKADGVSPIVTMMKDQFANYVLQRALGV 318
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
RGN+ L+ YGCR LQR LP+++ + E+ + LM D FGNYVVQ ++E
Sbjct: 180 FRGNVYDLSTHPYGCRVLQRCFEHLPEDQTRPLLDELHRYMINLMQDQFGNYVVQFVLEH 239
Query: 211 CSEEQRTRILLMLTNDDFQLVR------IC---LNTHGIRAVLKLLENLTNPQQISLVLA 261
R +++L L Q+ R +C L T + L+E + P+
Sbjct: 240 GKATDRAQVILKLRGQILQMARHKFASNVCEKALMTADADSRRILIEEIMTPKA-----D 294
Query: 262 ALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV 299
+ P VT+ KD +YV+Q + E + L+N V
Sbjct: 295 GVSP-IVTMMKDQFANYVLQRALGVVEGEQRERLMNLV 331
>gi|395508976|ref|XP_003758783.1| PREDICTED: pumilio homolog 2 isoform 2 [Sarcophilus harrisii]
Length = 1002
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 162/305 (53%), Gaps = 13/305 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 645 RSRLLEDFRNNRFPNLQLRDLMGHIVEFSQDQHGSRFIQQKLERATPTERQMVFNEILQA 704
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E + +Q+ L + T ++ + L +G R + K LE++
Sbjct: 705 AYQLMTDVFGNYVIQKFFEFGNLDQK---LSLTTRIRGHVLPLALQMYGCRVIQKALESI 761
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
+ QQ +V L + KD NG++V+Q C++ + +++++ + ++T
Sbjct: 762 SPDQQNDMV-KELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAFKGQVFVLSTHP 820
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P + ++ +
Sbjct: 821 YGCRVIQRILEHCTVEQTLPVLEELHQHTEQLVQDQYGNYVIQHVLEHGRPDDKSKIVSE 880
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYV 425
+ G ++ S +K+ SNVVE+C+ + + +I E+ P+ ++ M + NYV
Sbjct: 881 IRGKVLTLSQHKFASNVVEKCVSHASRAERALLIDEICCQNDGPHSALYTMMKDQYANYV 940
Query: 426 IQSAL 430
+Q +
Sbjct: 941 VQKMI 945
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 125/247 (50%), Gaps = 15/247 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 737 IRGHVLPLALQMYGCRVIQKALESISPDQQNDMVKELDGHVLKCVKDQNGNHVVQKCIE- 795
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ T Q + VL L
Sbjct: 796 CVQPQALQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTVEQTLP-VLEELHQHTE 850
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H +D +++E+ ++ K V++ CV ++ A+R
Sbjct: 851 QLVQDQYGNYVIQHVLEHGRPDDKSKIVSEIRGKVLTLSQHKFASNVVEKCVSHASRAER 910
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ EI + + +D Y NYVVQ ++ + P L+ ++ H +
Sbjct: 911 ALLIDEICCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPGQRKVLMHKIRPHVTTLRKY 970
Query: 382 KYGSNVV 388
YG +++
Sbjct: 971 TYGKHIL 977
>gi|350538385|ref|NP_001233239.1| Pumilio2 [Xenopus laevis]
gi|313661062|dbj|BAJ41096.1| Pumilio2 [Xenopus laevis]
Length = 1173
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 152/288 (52%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL G+IV ++DQ+G R +Q+ + E +++F E++ +LM D FGNYV+QK
Sbjct: 833 LRDLMGHIVEFSQDQHGSRFIQQKLERASPAERQLVFSEILQAAYQLMTDVFGNYVIQKF 892
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S +Q+ L + T ++ + L +G R + K LE+++ QQ +V L
Sbjct: 893 FEFGSMDQK---LALATRIRGHVLPLALQMYGCRVIQKALESISTDQQSEMVRE-LDGHV 948
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + + +++ Y ++T GC V+Q +E+ Q
Sbjct: 949 LKCVKDQNGNHVVQKCIECVTPQSLHFIIEAFKGQVYVLSTHPYGCRVIQRILEHCTPEQ 1008
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L + ++ ++ G + S +K+ SNV
Sbjct: 1009 TLPILEELHQSTEQLVQDQYGNYVIQHVLEHGRSDDKSKIVCEVRGQVLVLSQHKFASNV 1068
Query: 388 VERCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYVIQSAL 430
VE+C+ S + +I E+ P+ ++ M + NYV+Q +
Sbjct: 1069 VEKCVTHSSRTERAFLIDEICCQNDGPHSALYTMMKDQYANYVVQKMI 1116
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 111/250 (44%), Gaps = 51/250 (20%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+ ++ + E+ V + + D GN+VVQK +E
Sbjct: 908 IRGHVLPLALQMYGCRVIQKALESISTDQQSEMVRELDGHVLKCVKDQNGNHVVQKCIE- 966
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C Q ++ + F+ L+TH G R + ++LE+ T P+Q +L L
Sbjct: 967 CVTPQSLHFII----EAFKGQVYVLSTHPYGCRVIQRILEHCT-PEQTLPILEELHQSTE 1021
Query: 269 TLTKDTNGHYVIQY------------------------------------CVKHFSHEDT 292
L +D G+YVIQ+ CV H S +
Sbjct: 1022 QLVQDQYGNYVIQHVLEHGRSDDKSKIVCEVRGQVLVLSQHKFASNVVEKCVTHSSRTER 1081
Query: 293 KYLLNEVA-------DNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAED 345
+L++E+ Y + D+ V+Q ++ ++ AQR+ ++ +I + L +
Sbjct: 1082 AFLIDEICCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKY 1141
Query: 346 CYGNYVVQHL 355
YG +++ L
Sbjct: 1142 TYGKHILAKL 1151
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 41/180 (22%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ +G + L+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q +
Sbjct: 977 IEAFKGQVYVLSTHPYGCRVIQRILEHCTPEQTLPILEELHQSTEQLVQDQYGNYVIQHV 1036
Query: 208 VELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA---------------- 242
+E + +++I+ L+L+ F +V C+ TH R
Sbjct: 1037 LEHGRSDDKSKIVCEVRGQVLVLSQHKFASNVVEKCV-THSSRTERAFLIDEICCQNDGP 1095
Query: 243 ---------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +++ +RP TL K T G +++ K++
Sbjct: 1096 HSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY 1155
>gi|134082176|emb|CAK42288.1| unnamed protein product [Aspergillus niger]
Length = 950
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 153/289 (52%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+IV + DQ+G R +Q+ + + +E E +F E+ +LM D FGNYVVQKL
Sbjct: 528 LKDIYGHIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNYVVQKL 587
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ ++ ++ + +G R V K LE++ QQ S+V L
Sbjct: 588 FEHGNQTQKK---ILANQMKGHILSLSTQMYGCRVVQKALEHILTDQQASMV-KELENHV 643
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ ++ + ++++N +AT GC V+Q +E+ +
Sbjct: 644 LRCVRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVERLATHPYGCRVIQRMLEHCEEVD 703
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
RE ++ E+ A L D +GNYV+QH++ + + ++ + +++S +K+ SNV
Sbjct: 704 RESILGELHACTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMSQLLTYSKHKFASNV 763
Query: 388 VERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSAL 430
VE+ +E GEE R +I L S N + L+ +GNYVIQ L
Sbjct: 764 VEKS-IEYGEESQRRQMISTLTSVNERGDSSLISLMRDQYGNYVIQKIL 811
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ +Y L ++ + + D+ G +Q +E + ++E++ EI +N+L L D +GNY
Sbjct: 523 NKRYELKDIYGHIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNY 582
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
VVQ L L Q++GH +S S YG VV++ L +Q ++ EL
Sbjct: 583 VVQKLFEHGNQTQKKILANQMKGHILSLSTQMYGCRVVQKALEHILTDQQASMVKELEN- 641
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 642 -HVLRCVRDQNGNHVIQKAI 660
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 91/220 (41%), Gaps = 47/220 (21%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
S +++L +++ +DQ G +Q+ + +P + ++ I +V L P+G V+
Sbjct: 633 ASMVKELENHVLRCVRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVERLATHPYGCRVI 692
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
Q+++E C E R IL L C +
Sbjct: 693 QRMLEHCEEVDRESILGEL--------HACTS---------------------------- 716
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
L D G+YVIQ+ +++ +D ++ V + K V++ +EY +
Sbjct: 717 ----KLITDQFGNYVIQHVIENGEDKDRSRMIVVVMSQLLTYSKHKFASNVVEKSIEYGE 772
Query: 325 GAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLA 357
+QR ++++ + ++ + L D YGNYV+Q +L
Sbjct: 773 ESQRRQMISTLTSVNERGDSSLISLMRDQYGNYVIQKILG 812
>gi|342181330|emb|CCC90809.1| putative pumillio RNA binding protein 4 [Trypanosoma congolense
IL3000]
Length = 998
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 140/248 (56%), Gaps = 16/248 (6%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLP--KEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
G IV +A DQ GCR LQ + P +E++ I E++ + +M DP+GN++VQKL+E+
Sbjct: 516 GRIVKMASDQQGCRMLQSVLERYPYNSQEVQCIVTELLPVITSVMTDPYGNFLVQKLLEI 575
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
E+R +L + L + ++ HG AV KL+++ + Q+ +V AL+ GA+ L
Sbjct: 576 APNEERMHLLSYYISGS--LCEVAVSPHGNYAVQKLIDSFRSKQEGKVVCLALQRGALWL 633
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
KD NG +VIQ ++ E+ +L + + ++ + DK GCCV+Q C++++ Q +R
Sbjct: 634 MKDLNGSHVIQKLLQCIDQENLVFLYDIIVEHTVDVCNDKYGCCVVQKCMDHASALQLQR 693
Query: 331 LVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLE-------GHYVSFSC-NK 382
+ ++ + + L+ + YGNYVV H++ + +SL R + G + C NK
Sbjct: 694 VKGALLPHMVPLSLNPYGNYVVTHIIGMH----NSSLGRHVADEAARCVGPVLEVLCENK 749
Query: 383 YGSNVVER 390
+ SNVVE+
Sbjct: 750 FASNVVEK 757
>gi|317035324|ref|XP_001396658.2| mRNA binding protein Pumilio 2 [Aspergillus niger CBS 513.88]
Length = 912
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 153/289 (52%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+IV + DQ+G R +Q+ + + +E E +F E+ +LM D FGNYVVQKL
Sbjct: 490 LKDIYGHIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNYVVQKL 549
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ ++ ++ + +G R V K LE++ QQ S+V L
Sbjct: 550 FEHGNQTQKK---ILANQMKGHILSLSTQMYGCRVVQKALEHILTDQQASMV-KELENHV 605
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ ++ + ++++N +AT GC V+Q +E+ +
Sbjct: 606 LRCVRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVERLATHPYGCRVIQRMLEHCEEVD 665
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
RE ++ E+ A L D +GNYV+QH++ + + ++ + +++S +K+ SNV
Sbjct: 666 RESILGELHACTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMSQLLTYSKHKFASNV 725
Query: 388 VERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSAL 430
VE+ +E GEE R +I L S N + L+ +GNYVIQ L
Sbjct: 726 VEKS-IEYGEESQRRQMISTLTSVNERGDSSLISLMRDQYGNYVIQKIL 773
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ +Y L ++ + + D+ G +Q +E + ++E++ EI +N+L L D +GNY
Sbjct: 485 NKRYELKDIYGHIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNY 544
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
VVQ L L Q++GH +S S YG VV++ L +Q ++ EL
Sbjct: 545 VVQKLFEHGNQTQKKILANQMKGHILSLSTQMYGCRVVQKALEHILTDQQASMVKELEN- 603
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 604 -HVLRCVRDQNGNHVIQKAI 622
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 91/220 (41%), Gaps = 47/220 (21%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
S +++L +++ +DQ G +Q+ + +P + ++ I +V L P+G V+
Sbjct: 595 ASMVKELENHVLRCVRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVERLATHPYGCRVI 654
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
Q+++E C E R IL L C +
Sbjct: 655 QRMLEHCEEVDRESILGEL--------HACTS---------------------------- 678
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
L D G+YVIQ+ +++ +D ++ V + K V++ +EY +
Sbjct: 679 ----KLITDQFGNYVIQHVIENGEDKDRSRMIVVVMSQLLTYSKHKFASNVVEKSIEYGE 734
Query: 325 GAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLA 357
+QR ++++ + ++ + L D YGNYV+Q +L
Sbjct: 735 ESQRRQMISTLTSVNERGDSSLISLMRDQYGNYVIQKILG 774
>gi|330933813|ref|XP_003304306.1| hypothetical protein PTT_16851 [Pyrenophora teres f. teres 0-1]
gi|311319138|gb|EFQ87583.1| hypothetical protein PTT_16851 [Pyrenophora teres f. teres 0-1]
Length = 890
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 157/306 (51%), Gaps = 14/306 (4%)
Query: 131 LSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
L+ KR Q ++ L D++ ++V A DQ+G R +Q+ + + E E +F E+ +
Sbjct: 494 LNFKREQKQSKRWE---LTDIKDHVVEFAGDQHGSRFIQQKLETANSEVKESVFRELEEN 550
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
+LM D FGNYV+QK E + Q+ ++ + ++ + + R V K LE+
Sbjct: 551 ALQLMQDVFGNYVIQKFFEHGDQVQKKILVGKMKG---HVLELANQMYACRVVQKALEHA 607
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
QQ ++V L + KD NG++VIQ + + + ++ N ++ +
Sbjct: 608 LTEQQAAMV-KELEKDVLKTVKDQNGNHVIQKVIDRVPMQHIQKIVEAFRGNVGVLSVNS 666
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E + QR ++ E+ A L D YGNYV QH++ +P+ A ++
Sbjct: 667 YGCRVIQRLLEKVQEPQRRFILTELHAEGSKLITDQYGNYVTQHVIEHGLPEDRAKIVSL 726
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSP------NVSMLLMHPFGNY 424
++ ++ FS +K+ SNVVERCL+ G++ R ++ ++ S NV LL +GNY
Sbjct: 727 IKAQFLMFSKHKFASNVVERCLI-CGDDAQRRELVAVVLSKNERGETNVMNLLRDGYGNY 785
Query: 425 VIQSAL 430
VIQ L
Sbjct: 786 VIQKLL 791
>gi|328698838|ref|XP_003240745.1| PREDICTED: pumilio homolog 2-like isoform 2 [Acyrthosiphon pisum]
Length = 1151
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 151/287 (52%), Gaps = 6/287 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +++F E++ LM D FGNYV+QK
Sbjct: 808 LRDLTNHIVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGNYVIQKF 867
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ++ + + ++ + L +G R + K LE++ QQ+ +V L
Sbjct: 868 FEFGTPEQKSTLAQKVRG---HVLPLALQMYGCRVIQKALESVGGEQQVEIV-RELDGHV 923
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++N ++T GC V+Q +E+ Q
Sbjct: 924 LKCVKDQNGNHVVQKCIECVDPHALQFIINAFQGQVLTLSTHPYGCRVIQRILEHCTSEQ 983
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L + + L+ + G ++ S +K+ SNV
Sbjct: 984 TAPILDEMHQHVEQLIQDQYGNYVIQHVLEHGKQEDKSKLICSVRGKVLTLSQHKFASNV 1043
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLV 432
VE+C+ + + + +I E+ + +++ + NYV+Q L V
Sbjct: 1044 VEKCVTHATRSERSMLIEEVCGFNDNALHVMMKDQYANYVVQKMLDV 1090
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 136/259 (52%), Gaps = 15/259 (5%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ +RG+++ LA YGCR +Q+ + S+ E+ I E+ V + + D GN+VVQK +
Sbjct: 881 QKVRGHVLPLALQMYGCRVIQKALESVGGEQQVEIVRELDGHVLKCVKDQNGNHVVQKCI 940
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + + ++ + FQ + L+TH G R + ++LE+ T+ +Q + +L +
Sbjct: 941 E-CVDPHALQFII----NAFQGQVLTLSTHPYGCRVIQRILEHCTS-EQTAPILDEMHQH 994
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED L+ V ++ K V++ CV ++ +
Sbjct: 995 VEQLIQDQYGNYVIQHVLEHGKQEDKSKLICSVRGKVLTLSQHKFASNVVEKCVTHATRS 1054
Query: 327 QRERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+R L+ E+ NAL ++ +D Y NYVVQ +L + L+ ++ H+ S
Sbjct: 1055 ERSMLIEEVCGFNDNALHVMMKDQYANYVVQKMLDVCESSQRKVLMHKIRPHFASLRKYT 1114
Query: 383 YGSNVV---ERCLLESGEE 398
YG +++ E+ ++S ++
Sbjct: 1115 YGKHIISKLEKYFMKSNQQ 1133
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 290 EDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGN 349
ED L ++ ++ + D+ G +Q +E + +++ + +EI+A A L D +GN
Sbjct: 802 EDFSLQLRDLTNHIVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGN 861
Query: 350 YVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLR 409
YV+Q P+ ++L +++ GH + + YG V+++ L G EQ I+ EL
Sbjct: 862 YVIQKFFEFGTPEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESVGGEQQVEIVREL-- 919
Query: 410 SPNVSMLLMHPFGNYVIQ 427
+V + GN+V+Q
Sbjct: 920 DGHVLKCVKDQNGNHVVQ 937
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 2/177 (1%)
Query: 254 QQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGC 313
+ SL L L V ++D +G IQ ++ S + + + +E+ Y + TD G
Sbjct: 802 EDFSLQLRDLTNHIVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGN 861
Query: 314 CVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEG 373
V+Q E+ Q+ L ++ + L LA YG V+Q L + ++R+L+G
Sbjct: 862 YVIQKFFEFGTPEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESVGGEQQVEIVRELDG 921
Query: 374 HYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
H + ++ G++VV++C +E + + + II + V L HP+G VIQ L
Sbjct: 922 HVLKCVKDQNGNHVVQKC-IECVDPHALQFIINAFQG-QVLTLSTHPYGCRVIQRIL 976
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 64/140 (45%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ ++ L +DQYG +Q + +E+ + V +V L F + VV+K
Sbjct: 988 LDEMHQHVEQLIQDQYGNYVIQHVLEHGKQEDKSKLICSVRGKVLTLSQHKFASNVVEKC 1047
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + +R+ ++ + + + + + V++ + ++ Q +++ +RP
Sbjct: 1048 VTHATRSERSMLIEEVCGFNDNALHVMMKDQYANYVVQKMLDVCESSQRKVLMHKIRPHF 1107
Query: 268 VTLTKDTNGHYVIQYCVKHF 287
+L K T G ++I K+F
Sbjct: 1108 ASLRKYTYGKHIISKLEKYF 1127
>gi|291238122|ref|XP_002738980.1| PREDICTED: pumilio homolog 2-like [Saccoglossus kowalevskii]
Length = 643
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 162/309 (52%), Gaps = 13/309 (4%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL +IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 287 RSRLLEDFRNNRFPNLQLRDLVNHIVEFSQDQHGSRFIQQKLERATPTERQMVFNEILGS 346
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
LM D FGNYV+QK E + +Q+ + + ++ + L +G R + K LE++
Sbjct: 347 AYNLMTDVFGNYVIQKFFEFGTPDQKMALAQRVRG---HVLPLALQMYGCRVIQKALESI 403
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
QQ+ +V L + KD NG++V+Q C++ +++++ + ++T
Sbjct: 404 PPDQQVDIV-KELDGHVLKCVKDQNGNHVVQKCIECVEPVALQFIIDAFRGQIFVLSTHP 462
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ N L +D YGNYV+QH+L P+ + ++ +
Sbjct: 463 YGCRVIQRILEHCTVDQTIPILEELHDNTERLVQDQYGNYVIQHVLEHGRPEDKSKIVAE 522
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLR---SPNVSMLLMHP--FGNYV 425
L G + S +K+ SNVVE+C+ + + +I E++ P+ ++ M + NYV
Sbjct: 523 LRGKVLVLSQHKFASNVVEKCVTHASRPERALLIDEVISYNDGPHSALYTMMKDQYANYV 582
Query: 426 IQSALLVSK 434
+Q + VS+
Sbjct: 583 VQKMIDVSE 591
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 128/249 (51%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+P ++ I E+ V + + D GN+VVQK +E
Sbjct: 379 VRGHVLPLALQMYGCRVIQKALESIPPDQQVDIVKELDGHVLKCVKDQNGNHVVQKCIE- 437
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C E + L D F+ L+TH G R + ++LE+ T Q I +L L
Sbjct: 438 CVEP----VALQFIIDAFRGQIFVLSTHPYGCRVIQRILEHCTVDQTIP-ILEELHDNTE 492
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED ++ E+ ++ K V++ CV ++ +R
Sbjct: 493 RLVQDQYGNYVIQHVLEHGRPEDKSKIVAELRGKVLVLSQHKFASNVVEKCVTHASRPER 552
Query: 329 ERLVAEIIA------NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+I+ +AL + +D Y NYVVQ ++ + P L++++ H +
Sbjct: 553 ALLIDEVISYNDGPHSALYTMMKDQYANYVVQKMIDVSEPGQRRILMQKIRPHIATLRKF 612
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 613 TYGKHILAK 621
>gi|367028016|ref|XP_003663292.1| hypothetical protein MYCTH_2305032 [Myceliophthora thermophila ATCC
42464]
gi|347010561|gb|AEO58047.1| hypothetical protein MYCTH_2305032 [Myceliophthora thermophila ATCC
42464]
Length = 891
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 157/315 (49%), Gaps = 21/315 (6%)
Query: 122 VPRNQWMSSL------SLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSL 175
P N + S+L S K +W L+D+ G+IV + DQ R +Q+ + +
Sbjct: 467 APGNSFRSALLHEFKHSPKSKRW--------ELKDIWGHIVEFSGDQQASRFIQQKLETA 518
Query: 176 PKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICL 235
+E + +F E+ +LM D FGNYV+QKL E + Q+ + + ++V + +
Sbjct: 519 NSDERDQVFAEIEKNAIQLMKDVFGNYVMQKLFEYGDQVQKKVLASAMKG---KVVDLSM 575
Query: 236 NTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYL 295
+ R V K LE++ QQ LV L + + KD +G++VIQ + E ++
Sbjct: 576 QPYACRVVQKALEHVLVEQQTELV-KELESDLLKVAKDQHGNHVIQQAIVLVPREHIDFI 634
Query: 296 LNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHL 355
+ Y +A+ + GC V+Q +E+ A + L+ E+ +A L D YGNYV+QH+
Sbjct: 635 MTGFKGRVYELASHQFGCRVIQRILEHGTEADKAALMVELHNSAQSLVTDMYGNYVIQHV 694
Query: 356 LALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL-RSPNVS 414
L P+ A ++ + + S +K SNVVE+C++ E+ I +L+ PN
Sbjct: 695 LEKGRPEDRAKMIGVVTPQLLMLSRHKNASNVVEKCIMLGTPEEQRAIRDKLMGEEPNSP 754
Query: 415 M--LLMHPFGNYVIQ 427
+ L+ FGNYVIQ
Sbjct: 755 LFQLMKDQFGNYVIQ 769
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 16/191 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ +G + LA Q+GCR +QR + + + + VE+ + L+ D +GNYV+Q +
Sbjct: 635 MTGFKGRVYELASHQFGCRVIQRILEHGTEADKAALMVELHNSAQSLVTDMYGNYVIQHV 694
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLK--LLENLTNPQQISLVLAALRP 265
+E E R +++ ++T QL+ + + + V K +L + I L P
Sbjct: 695 LEKGRPEDRAKMIGVVTP---QLLMLSRHKNASNVVEKCIMLGTPEEQRAIRDKLMGEEP 751
Query: 266 GA--VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
+ L KD G+YVIQ VK +D L+N++A + + KSG Q +E
Sbjct: 752 NSPLFQLMKDQFGNYVIQKLVKALQGQDRMVLVNKLASHLQSL--RKSGATSKQ--IE-- 805
Query: 324 KGAQRERLVAE 334
ERLVAE
Sbjct: 806 ---AMERLVAE 813
>gi|320586016|gb|EFW98695.1| pumilio family mRNA-binding protein [Grosmannia clavigera kw1407]
Length = 953
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 147/288 (51%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ +IV + DQ+G R +Q + + +E E +F E+ LM D FGNYVVQK
Sbjct: 536 LKDIYDHIVEFSGDQHGSRFIQSKLETANSDEKEHVFREISANTLVLMQDVFGNYVVQKF 595
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S+ Q+ + + ++V + T+ R V K L+++ QQ+ ++ L
Sbjct: 596 FEHGSQLQKKYLAEQMRG---KIVDLSTQTYACRVVQKALQHILVDQQV-ILAKELEIDV 651
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ + KD NG++VIQ V+ E ++++ ++ GC V+Q +E+
Sbjct: 652 IRVVKDPNGNHVIQKVVELVPREHINFIIDAFRGRVRELSAHNYGCRVIQRMLEHGLEED 711
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+E +++E+ NA+ L D YGNYV QH++ P+ ++ ++ V+ S NK+ SNV
Sbjct: 712 KEMILSELHDNAMDLINDQYGNYVAQHVIQFGKPRDREKVISRVLNQLVTMSNNKFASNV 771
Query: 388 VERCLLESGEEQSTRIIIELLR-----SPNVSMLLMHPFGNYVIQSAL 430
VE+C+ RI EL R P + ++ +GNYVIQ L
Sbjct: 772 VEKCIEFGTAADRQRIREELSRLGPDGQPILQQMIKDQYGNYVIQKLL 819
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 9/147 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
RG + L+ YGCR +QR + +E+ EMI E+ D +L+ D +GNYV Q +++
Sbjct: 683 FRGRVRELSAHNYGCRVIQRMLEHGLEEDKEMILSELHDNAMDLINDQYGNYVAQHVIQF 742
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLE--NLTNPQQISLVLAALRPGAV 268
R +++ + N QLV + N V K +E + Q+I L+ L P
Sbjct: 743 GKPRDREKVISRVLN---QLVTMSNNKFASNVVEKCIEFGTAADRQRIREELSRLGPDGQ 799
Query: 269 T----LTKDTNGHYVIQYCVKHFSHED 291
+ KD G+YVIQ +K E+
Sbjct: 800 PILQQMIKDQYGNYVIQKLLKQLKGEE 826
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
++ L ++ D+ + D+ G +Q +E + ++E + EI AN L+L +D +GNYVV
Sbjct: 533 RFELKDIYDHIVEFSGDQHGSRFIQSKLETANSDEKEHVFREISANTLVLMQDVFGNYVV 592
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q L Q+ G V S Y VV++ L +Q + EL +
Sbjct: 593 QKFFEHGSQLQKKYLAEQMRGKIVDLSTQTYACRVVQKALQHILVDQQVILAKEL--EID 650
Query: 413 VSMLLMHPFGNYVIQ 427
V ++ P GN+VIQ
Sbjct: 651 VIRVVKDPNGNHVIQ 665
>gi|390336472|ref|XP_794621.3| PREDICTED: pumilio homolog 1 [Strongylocentrotus purpuratus]
Length = 1183
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 162/314 (51%), Gaps = 10/314 (3%)
Query: 127 WMSSLSLKRNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEM 182
+M + R++ L+D F LRDL +IV ++DQ+G R +Q+ + E +M
Sbjct: 822 YMEKSAPGRSRLLEDFRNNRFPNLQLRDLVSHIVEFSQDQHGSRFIQQKLERATPTERQM 881
Query: 183 IFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRA 242
+F E++ LM D FGNYV+QK E EQ+ + + ++ + L +G R
Sbjct: 882 VFSEILGAAYSLMTDVFGNYVIQKFFEFGLPEQKQALAQRIRG---HVLPLALQMYGCRV 938
Query: 243 VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADN 302
+ K LE++ P+ + ++ L + KD NG++V+Q C++ +++++
Sbjct: 939 IQKALESIP-PELQTEMVKELDGHVLKCVKDQNGNHVVQKCIECVEPAALQFIVDAFRGQ 997
Query: 303 CYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ 362
Y ++T GC V+Q +E+ Q + L+ E+ L +D YGNYV+QH+L P+
Sbjct: 998 VYSLSTHPYGCRVIQRILEHCIVEQTKPLLDELHQQTESLVQDQYGNYVIQHVLEHGRPE 1057
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLM--HP 420
+ ++ ++ G + S +K+ SNVVE+C+ S + +I E+ + ++ M
Sbjct: 1058 DKSKIVLEMRGKVLVLSQHKFASNVVEKCITHSSRPERALLIDEVCSYNDGALYTMMKDQ 1117
Query: 421 FGNYVIQSALLVSK 434
+ NYV+Q + VS+
Sbjct: 1118 YANYVVQKMIDVSE 1131
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 112/248 (45%), Gaps = 50/248 (20%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKE-EIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
+RG+++ LA YGCR +Q+ + S+P E + EM+ E+ V + + D GN+VVQK +E
Sbjct: 922 IRGHVLPLALQMYGCRVIQKALESIPPELQTEMV-KELDGHVLKCVKDQNGNHVVQKCIE 980
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGA 267
C E + ++ D F+ L+TH G R + ++LE+ +Q +L L
Sbjct: 981 -CVEPAALQFIV----DAFRGQVYSLSTHPYGCRVIQRILEHCIV-EQTKPLLDELHQQT 1034
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNE----------------VADNC-------- 303
+L +D G+YVIQ+ ++H ED ++ E V + C
Sbjct: 1035 ESLVQDQYGNYVIQHVLEHGRPEDKSKIVLEMRGKVLVLSQHKFASNVVEKCITHSSRPE 1094
Query: 304 ----------------YGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
Y + D+ V+Q ++ S+ QR+ L+ +I L + Y
Sbjct: 1095 RALLIDEVCSYNDGALYTMMKDQYANYVVQKMIDVSEPNQRKILMHKIRPYVASLRKYTY 1154
Query: 348 GNYVVQHL 355
G +++ L
Sbjct: 1155 GKHILAKL 1162
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 38/174 (21%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
RG + +L+ YGCR +QR + E+ + + E+ + L+ D +GNYV+Q ++E
Sbjct: 994 FRGQVYSLSTHPYGCRVIQRILEHCIVEQTKPLLDELHQQTESLVQDQYGNYVIQHVLEH 1053
Query: 211 CSEEQRTRILL-------MLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+L +L+ F +V C+ TH R
Sbjct: 1054 GRPEDKSKIVLEMRGKVLVLSQHKFASNVVEKCI-THSSRPERALLIDEVCSYNDGALYT 1112
Query: 243 ---------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + +++ P Q +++ +RP +L K T G +++ K F
Sbjct: 1113 MMKDQYANYVVQKMIDVSEPNQRKILMHKIRPYVASLRKYTYGKHILAKLEKFF 1166
>gi|358369705|dbj|GAA86319.1| mRNA binding protein Pumilio 2 [Aspergillus kawachii IFO 4308]
Length = 932
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 153/289 (52%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+IV + DQ+G R +Q+ + + +E E +F E+ +LM D FGNYVVQKL
Sbjct: 510 LKDIYGHIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNSLQLMTDVFGNYVVQKL 569
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ ++ ++ + +G R V K LE++ QQ S+V L
Sbjct: 570 FEHGNQTQKK---ILANQMKGHILSLSTQMYGCRVVQKALEHILTDQQASMV-KELESHV 625
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ ++ + ++++N +AT GC V+Q +E+ +
Sbjct: 626 LRCVRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVDRLATHPYGCRVIQRMLEHCEEVD 685
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
RE ++ E+ A L D +GNYV+QH++ + + ++ + +++S +K+ SNV
Sbjct: 686 RESILGELHACTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMSQLLTYSKHKFASNV 745
Query: 388 VERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSAL 430
VE+ +E GEE R +I L S N + L+ +GNYVIQ L
Sbjct: 746 VEKS-IEYGEESQRRQMISTLTSVNERGDSPLISLMRDQYGNYVIQKIL 793
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ +Y L ++ + + D+ G +Q +E + ++E++ EI N+L L D +GNY
Sbjct: 505 NKRYELKDIYGHIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNSLQLMTDVFGNY 564
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
VVQ L L Q++GH +S S YG VV++ L +Q ++ EL
Sbjct: 565 VVQKLFEHGNQTQKKILANQMKGHILSLSTQMYGCRVVQKALEHILTDQQASMVKEL--E 622
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 623 SHVLRCVRDQNGNHVIQKAI 642
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 90/220 (40%), Gaps = 47/220 (21%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
S +++L +++ +DQ G +Q+ + +P + ++ I +V L P+G V+
Sbjct: 615 ASMVKELESHVLRCVRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVDRLATHPYGCRVI 674
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
Q+++E C E R IL L C +
Sbjct: 675 QRMLEHCEEVDRESILGEL--------HACTS---------------------------- 698
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
L D G+YVIQ+ +++ +D ++ V + K V++ +EY +
Sbjct: 699 ----KLITDQFGNYVIQHVIENGEDKDRSRMIVVVMSQLLTYSKHKFASNVVEKSIEYGE 754
Query: 325 GAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLA 357
+QR ++++ + + + L D YGNYV+Q +L
Sbjct: 755 ESQRRQMISTLTSVNERGDSPLISLMRDQYGNYVIQKILG 794
>gi|195153222|ref|XP_002017528.1| GL22345 [Drosophila persimilis]
gi|194112585|gb|EDW34628.1| GL22345 [Drosophila persimilis]
Length = 675
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 151/290 (52%), Gaps = 6/290 (2%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
S L +IV ++DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK
Sbjct: 243 SCATLLNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQK 302
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E + EQ+ + + + QL L +G R + K LE+++ P+Q ++ L
Sbjct: 303 FFEFGTPEQKNTLGMQVKGHVLQL---ALQMYGCRVIHKGLESIS-PEQQQEIVHELDGH 358
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ ++++N Y ++T GC V+Q +E+
Sbjct: 359 VLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAE 418
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ N L +D YGNYV+QH+L + + L+ + G + S +K+ SN
Sbjct: 419 QTTPILDELHENTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASN 478
Query: 387 VVERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLVSK 434
VVE+C+ + + T +I E+ + +++ + NYV+Q + VS+
Sbjct: 479 VVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSE 528
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 124/243 (51%), Gaps = 12/243 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+++ LA YGCR + + + S+ E+ + I E+ V + + D GN+VVQK +E
Sbjct: 319 VKGHVLQLALQMYGCRVIHKGLESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIE- 377
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + + L + F+ L+TH G R + ++LE+ T +Q + +L L
Sbjct: 378 CVDP----VALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCT-AEQTTPILDELHENTE 432
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED L+N V ++ K V++ CV ++ +R
Sbjct: 433 QLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGER 492
Query: 329 ERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H + YG
Sbjct: 493 TGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMTALRKYTYG 552
Query: 385 SNV 387
++
Sbjct: 553 KHI 555
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 61/132 (46%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +L N L +DQYG +Q + +E+ ++ V +V L F + VV+K
Sbjct: 424 LDELHENTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKC 483
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + +RT ++ + + + + + V++ + +++ P Q+ ++ +RP
Sbjct: 484 VTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHM 543
Query: 268 VTLTKDTNGHYV 279
L K T G ++
Sbjct: 544 TALRKYTYGKHI 555
>gi|67540834|ref|XP_664191.1| hypothetical protein AN6587.2 [Aspergillus nidulans FGSC A4]
gi|40738926|gb|EAA58116.1| hypothetical protein AN6587.2 [Aspergillus nidulans FGSC A4]
gi|259480164|tpe|CBF71045.1| TPA: mRNA binding protein Pumilio 2, putative (AFU_orthologue;
AFUA_6G04310) [Aspergillus nidulans FGSC A4]
Length = 849
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 161/314 (51%), Gaps = 14/314 (4%)
Query: 123 PRNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEM 182
P+ W L+ R F+ L+D+ G+IV + DQYG R LQ+ + + +E +
Sbjct: 435 PQESWGPVLADFRLHGKNKRFE---LKDIYGHIVEFSGDQYGSRFLQQKIETANSDEKDR 491
Query: 183 IFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTND-DFQLVRICLNTHGIR 241
+F E++ +L D FGNYV QKL E ++ Q+ M+T D ++V++ L+ +G R
Sbjct: 492 VFREILPNFLQLAQDIFGNYVAQKLYEHGNQTQKK----MMTEDMRSKVVKLSLSPYGCR 547
Query: 242 AVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVAD 301
V K LE++ QQ LV ++P + + +G++VIQ ++ + TK L++
Sbjct: 548 VVQKALEHVLTDQQAWLVRE-IQPQVLECVESQHGNHVIQKVFEYVPTQYTKGLVDSFRG 606
Query: 302 NCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP 361
+T GC V+Q +E+ + R ++AEI A A L ED YGNYV+QH++
Sbjct: 607 QVERQSTHSYGCRVIQRMLEFCEDVDRRFILAEIRACAPRLIEDQYGNYVIQHIIQSGEE 666
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL-----RSPNVSML 416
+ + ++ ++ + +S +K+ SNVVE+ + E Q II L + L
Sbjct: 667 EDRSFMIEMVKQKLLWYSKHKFASNVVEKSIEFGNEAQRQDIITRLTAKTEGHETQLIEL 726
Query: 417 LMHPFGNYVIQSAL 430
+ +GNYV Q L
Sbjct: 727 MADQYGNYVFQKVL 740
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVC--ELMIDPFGNYVVQKLV 208
RG + + YGCR +QR + E+++ F+ R C L+ D +GNYV+Q ++
Sbjct: 604 FRGQVERQSTHSYGCRVIQRMLEFC--EDVDRRFILAEIRACAPRLIEDQYGNYVIQHII 661
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLE--NLTNPQQISLVLAALRPG 266
+ EE R+ ++ M+ +L+ + V K +E N Q I L A G
Sbjct: 662 QSGEEEDRSFMIEMVKQ---KLLWYSKHKFASNVVEKSIEFGNEAQRQDIITRLTAKTEG 718
Query: 267 AVT----LTKDTNGHYVIQYCVKHFSHEDTKYLLNEV 299
T L D G+YV Q + H S + L++ +
Sbjct: 719 HETQLIELMADQYGNYVFQKVLGHLSGVERAALVDRI 755
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++R L +DQYG +Q + S +E+ + V ++ F + VV+K
Sbjct: 637 LAEIRACAPRLIEDQYGNYVIQHIIQSGEEEDRSFMIEMVKQKLLWYSKHKFASNVVEKS 696
Query: 208 VELCSEEQRTRILLMLT----NDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL 263
+E +E QR I+ LT + QL+ + + +G K+L +L+ ++ +LV +
Sbjct: 697 IEFGNEAQRQDIITRLTAKTEGHETQLIELMADQYGNYVFQKVLGHLSGVERAALV-DRI 755
Query: 264 RPGAVTLTKDTNGHYV 279
+P V L K G +
Sbjct: 756 KPLLVHLKKSNCGKQI 771
>gi|358377871|gb|EHK15554.1| hypothetical protein TRIVIDRAFT_165243 [Trichoderma virens Gv29-8]
Length = 308
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 152/290 (52%), Gaps = 9/290 (3%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
LRD+ + V + DQ+G R +Q+ + S +E E +F E+ +LM D FGNYVVQK
Sbjct: 21 ELRDIYNHAVEFSGDQHGSRFIQQKLESANSDEKEQVFREIEPNALQLMKDVFGNYVVQK 80
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E S+ Q+ ++ ++V + + + R V K LE++ QQ L L P
Sbjct: 81 FFEYGSQLQKK---ILAEKMKGKVVDLSVQVYACRVVQKALEHILVEQQAELT-RELEPE 136
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ + KD NG++V+Q ++ + +++N V +A+ GC V+Q +E+ A
Sbjct: 137 ILRVIKDQNGNHVVQKIIELVPRQYIDFIMNAVRGQVTPLASHAYGCRVIQRLLEHGTEA 196
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ ++ E+ A+A +L D YGNYV QH++ P+ +++ + G ++ S +K+ SN
Sbjct: 197 DKAEIMGELHASAQILITDQYGNYVAQHVIQNGEPEDRERIIQLVMGQLLTLSKHKFASN 256
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN-----VSMLLMHPFGNYVIQSALL 431
VVE+C+ Q T I +L + + ++ FGNYVI+ +L+
Sbjct: 257 VVEKCIEYGTPAQRTTIREQLTTTGADGNNPLQQMMRDQFGNYVIRKSLV 306
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ +Y L ++ ++ + D+ G +Q +E + ++E++ EI NAL L +D +GNY
Sbjct: 17 NKRYELRDIYNHAVEFSGDQHGSRFIQQKLESANSDEKEQVFREIEPNALQLMKDVFGNY 76
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
VVQ L +++G V S Y VV++ L EQ + EL
Sbjct: 77 VVQKFFEYGSQLQKKILAEKMKGKVVDLSVQVYACRVVQKALEHILVEQQAELTREL--E 134
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
P + ++ GN+V+Q +
Sbjct: 135 PEILRVIKDQNGNHVVQKII 154
>gi|336380323|gb|EGO21476.1| hypothetical protein SERLADRAFT_473873 [Serpula lacrymans var.
lacrymans S7.9]
Length = 360
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 157/292 (53%), Gaps = 13/292 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI-DRVCELMIDPFGNYVVQK 206
LRD+ G +V + DQ+G R +Q+ + + EE +++F E++ + +L+ D FGNYV+QK
Sbjct: 21 LRDIFGYVVEFSGDQHGSRFIQQKLETATSEEKQLMFDEIVPNNTLQLIQDVFGNYVIQK 80
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L E ++ Q+T ++ + ++ + L +G R V K +E + P+Q + L P
Sbjct: 81 LFEHGTQVQKT---VLANTMEGHVLPLSLQMYGCRVVQKAVEYVL-PEQQGAFVKELEPH 136
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++VIQ ++ S E ++ N N Y ++T GC VLQ C E+
Sbjct: 137 VLKCVKDANGNHVIQKLIERVSPERLAFI-NSFRGNVYDLSTHPYGCRVLQRCFEHLPED 195
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q L+ E+ + L +D +GNYVVQ +L A ++ +L G + + +K+ SN
Sbjct: 196 QTRPLLDELHRYMINLMQDQFGNYVVQFVLEHGKATDRAQVILKLRGQILQMARHKFASN 255
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSALLV 432
V E+ L+ + + S RI+IE + +P + ++ F NYV+Q AL V
Sbjct: 256 VCEKALM-TADADSRRILIEEIMTPKADGVSPIVTMMKDQFANYVLQRALGV 306
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
RGN+ L+ YGCR LQR LP+++ + E+ + LM D FGNYVVQ ++E
Sbjct: 168 FRGNVYDLSTHPYGCRVLQRCFEHLPEDQTRPLLDELHRYMINLMQDQFGNYVVQFVLEH 227
Query: 211 CSEEQRTRILLMLTNDDFQLVR------IC---LNTHGIRAVLKLLENLTNPQQISLVLA 261
R +++L L Q+ R +C L T + L+E + P+
Sbjct: 228 GKATDRAQVILKLRGQILQMARHKFASNVCEKALMTADADSRRILIEEIMTPKA-----D 282
Query: 262 ALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV 299
+ P VT+ KD +YV+Q + E + L+N V
Sbjct: 283 GVSP-IVTMMKDQFANYVLQRALGVVEGEQRERLMNLV 319
>gi|47208830|emb|CAF90334.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1182
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 166/316 (52%), Gaps = 13/316 (4%)
Query: 121 SVPRNQWMSSLSLKRNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLP 176
S PR + R++ L+D F LRDL G++V ++DQ+G R +Q+ +
Sbjct: 810 SRPRYSRSDVMPSGRSRLLEDFRNNRFPNLQLRDLPGHMVEFSQDQHGSRFIQQKLERAT 869
Query: 177 KEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLN 236
E +M+F E++ +LM D FGNYV+QK E S +Q+ L + T ++ + L
Sbjct: 870 PAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSADQK---LALATRIRGHVLPLALQ 926
Query: 237 THGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLL 296
+G R + K LE++++ QQ S ++ L + KD NG++V+Q C++ + ++++
Sbjct: 927 MYGCRVIQKALESISSEQQ-SDIVRELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFII 985
Query: 297 NEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLL 356
+ + ++T GC V+Q +E+ Q ++ E+ ++ L +D YGNYV+QH+L
Sbjct: 986 DAFKGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHSEQLGQDQYGNYVIQHVL 1045
Query: 357 ALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL---LRSPNV 413
P+ + ++ ++ G + S +K+ + E+C++ S + +I E+ P+
Sbjct: 1046 EHGRPEDKSKIVAEVRGKVLVLSQHKFARTLWEKCVIHSSRAERALLIDEVCCQKDGPHS 1105
Query: 414 SMLLM--HPFGNYVIQ 427
++ M + NYV+Q
Sbjct: 1106 ALYTMMKDQYANYVVQ 1121
>gi|328698840|ref|XP_003240746.1| PREDICTED: pumilio homolog 2-like isoform 3 [Acyrthosiphon pisum]
Length = 1116
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 151/287 (52%), Gaps = 6/287 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +++F E++ LM D FGNYV+QK
Sbjct: 773 LRDLTNHIVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGNYVIQKF 832
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ++ + + ++ + L +G R + K LE++ QQ+ +V L
Sbjct: 833 FEFGTPEQKSTLAQKVRG---HVLPLALQMYGCRVIQKALESVGGEQQVEIVRE-LDGHV 888
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++N ++T GC V+Q +E+ Q
Sbjct: 889 LKCVKDQNGNHVVQKCIECVDPHALQFIINAFQGQVLTLSTHPYGCRVIQRILEHCTSEQ 948
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L + + L+ + G ++ S +K+ SNV
Sbjct: 949 TAPILDEMHQHVEQLIQDQYGNYVIQHVLEHGKQEDKSKLICSVRGKVLTLSQHKFASNV 1008
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLV 432
VE+C+ + + + +I E+ + +++ + NYV+Q L V
Sbjct: 1009 VEKCVTHATRSERSMLIEEVCGFNDNALHVMMKDQYANYVVQKMLDV 1055
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 136/259 (52%), Gaps = 15/259 (5%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ +RG+++ LA YGCR +Q+ + S+ E+ I E+ V + + D GN+VVQK +
Sbjct: 846 QKVRGHVLPLALQMYGCRVIQKALESVGGEQQVEIVRELDGHVLKCVKDQNGNHVVQKCI 905
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + + ++ + FQ + L+TH G R + ++LE+ T+ +Q + +L +
Sbjct: 906 E-CVDPHALQFII----NAFQGQVLTLSTHPYGCRVIQRILEHCTS-EQTAPILDEMHQH 959
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED L+ V ++ K V++ CV ++ +
Sbjct: 960 VEQLIQDQYGNYVIQHVLEHGKQEDKSKLICSVRGKVLTLSQHKFASNVVEKCVTHATRS 1019
Query: 327 QRERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+R L+ E+ NAL ++ +D Y NYVVQ +L + L+ ++ H+ S
Sbjct: 1020 ERSMLIEEVCGFNDNALHVMMKDQYANYVVQKMLDVCESSQRKVLMHKIRPHFASLRKYT 1079
Query: 383 YGSNVV---ERCLLESGEE 398
YG +++ E+ ++S ++
Sbjct: 1080 YGKHIISKLEKYFMKSNQQ 1098
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 290 EDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGN 349
ED L ++ ++ + D+ G +Q +E + +++ + +EI+A A L D +GN
Sbjct: 767 EDFSLQLRDLTNHIVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGN 826
Query: 350 YVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLR 409
YV+Q P+ ++L +++ GH + + YG V+++ L G EQ I+ EL
Sbjct: 827 YVIQKFFEFGTPEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESVGGEQQVEIVREL-- 884
Query: 410 SPNVSMLLMHPFGNYVIQ 427
+V + GN+V+Q
Sbjct: 885 DGHVLKCVKDQNGNHVVQ 902
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 2/177 (1%)
Query: 254 QQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGC 313
+ SL L L V ++D +G IQ ++ S + + + +E+ Y + TD G
Sbjct: 767 EDFSLQLRDLTNHIVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGN 826
Query: 314 CVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEG 373
V+Q E+ Q+ L ++ + L LA YG V+Q L + ++R+L+G
Sbjct: 827 YVIQKFFEFGTPEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESVGGEQQVEIVRELDG 886
Query: 374 HYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
H + ++ G++VV++C +E + + + II + V L HP+G VIQ L
Sbjct: 887 HVLKCVKDQNGNHVVQKC-IECVDPHALQFIINAFQG-QVLTLSTHPYGCRVIQRIL 941
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 64/140 (45%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ ++ L +DQYG +Q + +E+ + V +V L F + VV+K
Sbjct: 953 LDEMHQHVEQLIQDQYGNYVIQHVLEHGKQEDKSKLICSVRGKVLTLSQHKFASNVVEKC 1012
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + +R+ ++ + + + + + V++ + ++ Q +++ +RP
Sbjct: 1013 VTHATRSERSMLIEEVCGFNDNALHVMMKDQYANYVVQKMLDVCESSQRKVLMHKIRPHF 1072
Query: 268 VTLTKDTNGHYVIQYCVKHF 287
+L K T G ++I K+F
Sbjct: 1073 ASLRKYTYGKHIISKLEKYF 1092
>gi|260813527|ref|XP_002601469.1| hypothetical protein BRAFLDRAFT_286861 [Branchiostoma floridae]
gi|229286765|gb|EEN57481.1| hypothetical protein BRAFLDRAFT_286861 [Branchiostoma floridae]
Length = 734
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 154/296 (52%), Gaps = 13/296 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL ++V ++DQ+G R +Q+ + E +M+F E++ +LM D FGNYV+QK
Sbjct: 390 LRDLANHVVEFSQDQHGSRFIQQKLERATPAEKQMVFNEILSAAYQLMTDVFGNYVIQKF 449
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLE----NLTNPQQISLVLAAL 263
E + EQ+ + + ++ + L +G R + K LE +L Q+ LV L
Sbjct: 450 FEFGTPEQKNALAQKIRG---HVLPLALQMYGCRVIQKALECIPPDLKFSYQVELV-KEL 505
Query: 264 RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 506 DGHVLKCVKDQNGNHVVQKCIECVDPSELQFIIDAFRGQVFALSTHPYGCRVIQRILEHC 565
Query: 324 KGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
Q ++ E+ N L +D YGNYV+QH+L P+ + ++ +L G ++ S +K+
Sbjct: 566 TVEQTIPILEELHENTERLVQDQYGNYVIQHVLEHGRPEDKSKIVNELRGKVLALSQHKF 625
Query: 384 GSNVVERCLLESGEEQSTRIIIELLR-----SPNVSMLLMHPFGNYVIQSALLVSK 434
SNVVE+C+ S + +I E+ + ++ F NYV+Q + V++
Sbjct: 626 ASNVVEKCVSHSSRAERAMLIDEVCSYCDGTHSALYTMMKDQFANYVVQKMIDVAE 681
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 133/256 (51%), Gaps = 21/256 (8%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKE-----EIEMIFVEVIDRVCELMIDPFGNYV 203
+ +RG+++ LA YGCR +Q+ + +P + ++E++ E+ V + + D GN+V
Sbjct: 463 QKIRGHVLPLALQMYGCRVIQKALECIPPDLKFSYQVELV-KELDGHVLKCVKDQNGNHV 521
Query: 204 VQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLA 261
VQK +E C + + ++ D F+ L+TH G R + ++LE+ T Q I +L
Sbjct: 522 VQKCIE-CVDPSELQFII----DAFRGQVFALSTHPYGCRVIQRILEHCTVEQTIP-ILE 575
Query: 262 ALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVE 321
L L +D G+YVIQ+ ++H ED ++NE+ ++ K V++ CV
Sbjct: 576 ELHENTERLVQDQYGNYVIQHVLEHGRPEDKSKIVNELRGKVLALSQHKFASNVVEKCVS 635
Query: 322 YSKGAQRERLVAEIIA------NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGH 374
+S A+R L+ E+ + +AL + +D + NYVVQ ++ + PQ L+ ++ H
Sbjct: 636 HSSRAERAMLIDEVCSYCDGTHSALYTMMKDQFANYVVQKMIDVAEPQQRKILMHKIRPH 695
Query: 375 YVSFSCNKYGSNVVER 390
+ YG +++ +
Sbjct: 696 IATLRKYTYGKHILAK 711
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 110/224 (49%), Gaps = 11/224 (4%)
Query: 139 LQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDP 198
L+ S+ +++L G+++ KDQ G +Q+ + + E++ I +V L P
Sbjct: 493 LKFSYQVELVKELDGHVLKCVKDQNGNHVVQKCIECVDPSELQFIIDAFRGQVFALSTHP 552
Query: 199 FGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISL 258
+G V+Q+++E C+ EQ IL L + +LV+ + +G + +LE+ P+ S
Sbjct: 553 YGCRVIQRILEHCTVEQTIPILEELHENTERLVQ---DQYGNYVIQHVLEH-GRPEDKSK 608
Query: 259 VLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNC-------YGIATDKS 311
++ LR + L++ V++ CV H S + L++EV C Y + D+
Sbjct: 609 IVNELRGKVLALSQHKFASNVVEKCVSHSSRAERAMLIDEVCSYCDGTHSALYTMMKDQF 668
Query: 312 GCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHL 355
V+Q ++ ++ QR+ L+ +I + L + YG +++ L
Sbjct: 669 ANYVVQKMIDVAEPQQRKILMHKIRPHIATLRKYTYGKHILAKL 712
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F RG + AL+ YGCR +QR + E+ I E+ + L+
Sbjct: 535 QFIIDAF--------RGQVFALSTHPYGCRVIQRILEHCTVEQTIPILEELHENTERLVQ 586
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L L+ F +V C+ +H RA
Sbjct: 587 DQYGNYVIQHVLEHGRPEDKSKIVNELRGKVLALSQHKFASNVVEKCV-SHSSRAERAML 645
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ PQQ +++ +RP TL K T G
Sbjct: 646 IDEVCSYCDGTHSALYTMMKDQFANYVVQKMIDVAEPQQRKILMHKIRPHIATLRKYTYG 705
Query: 277 HYVIQYCVKHF 287
+++ K+F
Sbjct: 706 KHILAKLEKYF 716
>gi|403332189|gb|EJY65091.1| mRNA binding protein Pumilio 2 [Oxytricha trifallax]
gi|403345849|gb|EJY72304.1| mRNA binding protein Pumilio 2 [Oxytricha trifallax]
Length = 1648
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 152/285 (53%), Gaps = 6/285 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L L+GN++ L+ +Q G + LQR + + + ++ + E+ + +M+D +GNY Q+L
Sbjct: 1007 LNSLKGNVIKLSINQTGSKFLQRLLDNANPQIVQFLLDEIQSHLPMVMVDNYGNYFCQEL 1066
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+ CS QR +IL ++ D V IC N G + K ++ L N + + G
Sbjct: 1067 LINCSSAQRMQILERISVD---FVAICCNKKGTHTIQKFID-LVNLEAEEKFFQRVLAGH 1122
Query: 268 VTL-TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS-KG 325
V L + D G +VIQ +K F +++ +E+ + +ATD SG V++ + + K
Sbjct: 1123 VALLSSDVQGTHVIQNIIKCFEESKRQFVFDEIYEQFIELATDYSGLSVIKTIISKTHKP 1182
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
R+RL+ +++ANA+ LA++ YGNY +Q ++ ++ Q G S K S
Sbjct: 1183 ENRKRLMGKLVANAIELAQNPYGNYAIQQSFEHWDKELCQDIIPQFFGKVYQLSLQKCSS 1242
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
NV+++C+ S E I+ EL+ ++ L+ + +GN+V+Q+AL
Sbjct: 1243 NVIDKCIQNSKPEYLAIIMQELINCERLNNLITNSYGNFVVQNAL 1287
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 112/250 (44%), Gaps = 16/250 (6%)
Query: 144 DCSS------LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI-DRVCELMI 196
+CSS L + + VA+ ++ G +Q+ + + E E F V+ V L
Sbjct: 1069 NCSSAQRMQILERISVDFVAICCNKKGTHTIQKFIDLVNLEAEEKFFQRVLAGHVALLSS 1128
Query: 197 DPFGNYVVQKLVELCSEEQRTRILLMLTNDDF--QLVRICLNTHGIRAVLKLLENLTNPQ 254
D G +V+Q +++ C EE + + + D+ Q + + + G+ + ++ P+
Sbjct: 1129 DVQGTHVIQNIIK-CFEESKRQFVF----DEIYEQFIELATDYSGLSVIKTIISKTHKPE 1183
Query: 255 QISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCC 314
++ L A+ L ++ G+Y IQ +H+ E + ++ + Y ++ K
Sbjct: 1184 NRKRLMGKLVANAIELAQNPYGNYAIQQSFEHWDKELCQDIIPQFFGKVYQLSLQKCSSN 1243
Query: 315 VLQHCVEYSKGAQRERLVAEIIANALL--LAEDCYGNYVVQHLLALRVPQITASLLRQLE 372
V+ C++ SK ++ E+I L L + YGN+VVQ+ L + L Q+E
Sbjct: 1244 VIDKCIQNSKPEYLAIIMQELINCERLNNLITNSYGNFVVQNALKFATQEEKKKLSEQIE 1303
Query: 373 GHYVSFSCNK 382
+ + S +K
Sbjct: 1304 KNIPNISDSK 1313
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 105/223 (47%), Gaps = 5/223 (2%)
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
+C+ E+ T + L + ++++ +N G + + +LL+N NPQ + +L ++
Sbjct: 994 MCNYEEATSQVQKLNSLKGNVIKLSINQTGSKFLQRLLDN-ANPQIVQFLLDEIQSHLPM 1052
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
+ D G+Y Q + + S +L ++ + I +K G +Q ++ E
Sbjct: 1053 VMVDNYGNYFCQELLINCSSAQRMQILERISVDFVAICCNKKGTHTIQKFIDLVNLEAEE 1112
Query: 330 RLVAEIIANAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
+ ++A + LL+ D G +V+Q+++ + ++ ++ + + G +V+
Sbjct: 1113 KFFQRVLAGHVALLSSDVQGTHVIQNIIKCFEESKRQFVFDEIYEQFIELATDYSGLSVI 1172
Query: 389 ERCLLESGE-EQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ + ++ + E R++ +L+ N L +P+GNY IQ +
Sbjct: 1173 KTIISKTHKPENRKRLMGKLVA--NAIELAQNPYGNYAIQQSF 1213
>gi|313231125|emb|CBY19123.1| unnamed protein product [Oikopleura dioica]
Length = 725
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 148/290 (51%), Gaps = 5/290 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL ++V ++DQ+G R +Q+ + + E++F E++ L+ID FGNYV+QK
Sbjct: 393 LRDLVNHMVEFSQDQHGSRFIQQKLERCTPGDRELVFNEILSSSYNLIIDVFGNYVIQKF 452
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTN-PQQISLVLAALRPG 266
+E S EQR ++L + QL L +G R + K LE ++ P+ ++ L
Sbjct: 453 LEFGSVEQRVQLLNSIKGHVLQL---SLQMYGCRVIQKGLEAFSHLPEHQIDIVKELEGH 509
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q ++ E ++++ A Y ++T GC V+Q +E+
Sbjct: 510 VLKCVKDQNGNHVVQKVIECVPSEHLNFIVDAFAGQVYQLSTHPYGCRVIQRILEHCNTD 569
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q +++ EI L D YGNYVVQH+L + ++ G V + +K+ SN
Sbjct: 570 QTAQILDEIHPQTEQLTMDQYGNYVVQHILEHGRADDKTKITGEMRGRVVQLAQHKFASN 629
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMHP-FGNYVIQSALLVSKV 435
V+E+C+ S +I E+ S +M + NYV+Q L ++ +
Sbjct: 630 VIEKCVTSSSRTTRALMIDEVCGSSEALFTMMKDQYANYVVQKMLDIADM 679
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 126/250 (50%), Gaps = 13/250 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTM---SSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
L ++G+++ L+ YGCR +Q+ + S LP+ +I+ I E+ V + + D GN+VV
Sbjct: 465 LNSIKGHVLQLSLQMYGCRVIQKGLEAFSHLPEHQID-IVKELEGHVLKCVKDQNGNHVV 523
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK++E E I+ +QL + +G R + ++LE+ N Q + +L +
Sbjct: 524 QKVIECVPSEHLNFIVDAFAGQVYQL---STHPYGCRVIQRILEH-CNTDQTAQILDEIH 579
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
P LT D G+YV+Q+ ++H +D + E+ +A K V++ CV S
Sbjct: 580 PQTEQLTMDQYGNYVVQHILEHGRADDKTKITGEMRGRVVQLAQHKFASNVIEKCVTSSS 639
Query: 325 GAQRERLVAEIIANA---LLLAEDCYGNYVVQHLLALR-VPQITASLLRQLEGHYVSFSC 380
R ++ E+ ++ + +D Y NYVVQ +L + +PQ L+ Q++ H +
Sbjct: 640 RTTRALMIDEVCGSSEALFTMMKDQYANYVVQKMLDIADMPQ-KRKLVSQMKPHINNLKR 698
Query: 381 NKYGSNVVER 390
YG +++ +
Sbjct: 699 YTYGKHIITK 708
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 40/224 (17%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
KLLE+ N + + L L V ++D +G IQ ++ + D + + NE+ + Y
Sbjct: 378 KLLEDFRNNKLPNPQLRDLVNHMVEFSQDQHGSRFIQQKLERCTPGDRELVFNEILSSSY 437
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLAL--RVPQ 362
+ D G V+Q +E+ QR +L+ I + L L+ YG V+Q L +P+
Sbjct: 438 NLIIDVFGNYVIQKFLEFGSVEQRVQLLNSIKGHVLQLSLQMYGCRVIQKGLEAFSHLPE 497
Query: 363 ITASLLRQLEGHYVS------------------------------------FSCNKYGSN 386
++++LEGH + S + YG
Sbjct: 498 HQIDIVKELEGHVLKCVKDQNGNHVVQKVIECVPSEHLNFIVDAFAGQVYQLSTHPYGCR 557
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
V++R L +Q+ +I+ E+ P L M +GNYV+Q L
Sbjct: 558 VIQRILEHCNTDQTAQILDEI--HPQTEQLTMDQYGNYVVQHIL 599
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVC-------ELMIDPFGNY 202
++RG +V LA+ ++ +++ ++S + ++ ID VC +M D + NY
Sbjct: 613 EMRGRVVQLAQHKFASNVIEKCVTSSSRTTRALM----IDEVCGSSEALFTMMKDQYANY 668
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQI 256
VVQK++++ Q+ +++ + L R H ++ L+ L N Q I
Sbjct: 669 VVQKMLDIADMPQKRKLVSQMKPHINNLKRYTYGKH----IITKLDKLVNEQNI 718
>gi|328698836|ref|XP_001950648.2| PREDICTED: pumilio homolog 2-like isoform 1 [Acyrthosiphon pisum]
Length = 983
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 151/287 (52%), Gaps = 6/287 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +++F E++ LM D FGNYV+QK
Sbjct: 640 LRDLTNHIVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGNYVIQKF 699
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ++ + + ++ + L +G R + K LE++ QQ+ +V L
Sbjct: 700 FEFGTPEQKSTLAQKVRG---HVLPLALQMYGCRVIQKALESVGGEQQVEIV-RELDGHV 755
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++N ++T GC V+Q +E+ Q
Sbjct: 756 LKCVKDQNGNHVVQKCIECVDPHALQFIINAFQGQVLTLSTHPYGCRVIQRILEHCTSEQ 815
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L + + L+ + G ++ S +K+ SNV
Sbjct: 816 TAPILDEMHQHVEQLIQDQYGNYVIQHVLEHGKQEDKSKLICSVRGKVLTLSQHKFASNV 875
Query: 388 VERCLLESGEEQSTRIIIEL--LRSPNVSMLLMHPFGNYVIQSALLV 432
VE+C+ + + + +I E+ + +++ + NYV+Q L V
Sbjct: 876 VEKCVTHATRSERSMLIEEVCGFNDNALHVMMKDQYANYVVQKMLDV 922
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 136/259 (52%), Gaps = 15/259 (5%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ +RG+++ LA YGCR +Q+ + S+ E+ I E+ V + + D GN+VVQK +
Sbjct: 713 QKVRGHVLPLALQMYGCRVIQKALESVGGEQQVEIVRELDGHVLKCVKDQNGNHVVQKCI 772
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + + ++ + FQ + L+TH G R + ++LE+ T+ +Q + +L +
Sbjct: 773 E-CVDPHALQFII----NAFQGQVLTLSTHPYGCRVIQRILEHCTS-EQTAPILDEMHQH 826
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED L+ V ++ K V++ CV ++ +
Sbjct: 827 VEQLIQDQYGNYVIQHVLEHGKQEDKSKLICSVRGKVLTLSQHKFASNVVEKCVTHATRS 886
Query: 327 QRERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+R L+ E+ NAL ++ +D Y NYVVQ +L + L+ ++ H+ S
Sbjct: 887 ERSMLIEEVCGFNDNALHVMMKDQYANYVVQKMLDVCESSQRKVLMHKIRPHFASLRKYT 946
Query: 383 YGSNVV---ERCLLESGEE 398
YG +++ E+ ++S ++
Sbjct: 947 YGKHIISKLEKYFMKSNQQ 965
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 290 EDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGN 349
ED L ++ ++ + D+ G +Q +E + +++ + +EI+A A L D +GN
Sbjct: 634 EDFSLQLRDLTNHIVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGN 693
Query: 350 YVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLR 409
YV+Q P+ ++L +++ GH + + YG V+++ L G EQ I+ EL
Sbjct: 694 YVIQKFFEFGTPEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESVGGEQQVEIVREL-- 751
Query: 410 SPNVSMLLMHPFGNYVIQSAL 430
+V + GN+V+Q +
Sbjct: 752 DGHVLKCVKDQNGNHVVQKCI 772
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 2/177 (1%)
Query: 254 QQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGC 313
+ SL L L V ++D +G IQ ++ S + + + +E+ Y + TD G
Sbjct: 634 EDFSLQLRDLTNHIVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGN 693
Query: 314 CVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEG 373
V+Q E+ Q+ L ++ + L LA YG V+Q L + ++R+L+G
Sbjct: 694 YVIQKFFEFGTPEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESVGGEQQVEIVRELDG 753
Query: 374 HYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
H + ++ G++VV++C +E + + + II + V L HP+G VIQ L
Sbjct: 754 HVLKCVKDQNGNHVVQKC-IECVDPHALQFIINAFQG-QVLTLSTHPYGCRVIQRIL 808
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 64/140 (45%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ ++ L +DQYG +Q + +E+ + V +V L F + VV+K
Sbjct: 820 LDEMHQHVEQLIQDQYGNYVIQHVLEHGKQEDKSKLICSVRGKVLTLSQHKFASNVVEKC 879
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + +R+ ++ + + + + + V++ + ++ Q +++ +RP
Sbjct: 880 VTHATRSERSMLIEEVCGFNDNALHVMMKDQYANYVVQKMLDVCESSQRKVLMHKIRPHF 939
Query: 268 VTLTKDTNGHYVIQYCVKHF 287
+L K T G ++I K+F
Sbjct: 940 ASLRKYTYGKHIISKLEKYF 959
>gi|121703716|ref|XP_001270122.1| mRNA binding protein Pumilio 2, putative [Aspergillus clavatus NRRL
1]
gi|119398266|gb|EAW08696.1| mRNA binding protein Pumilio 2, putative [Aspergillus clavatus NRRL
1]
Length = 908
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 152/289 (52%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ +IV + DQ+G R +Q+ + + +E E +F E+ +LM D FGNYVVQKL
Sbjct: 487 LKDIYNHIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKL 546
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ ++ ++ + +G R V K LE++ QQ S+V L
Sbjct: 547 FEHGNQSQKK---ILANQMKGHVLALSTQMYGCRVVQKALEHILTDQQASMV-KELENHV 602
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ ++ + ++++N +A GC V+Q +E+ +
Sbjct: 603 LKCVRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVNRLAAHPYGCRVIQRMLEHCEEED 662
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
RE ++AE+ A L D +GNYV+QH++ + + ++ + + +S +K+ SNV
Sbjct: 663 RESILAELHACTTHLIPDQFGNYVIQHVIENGEEKDRSRMITIVLSQLLVYSKHKFASNV 722
Query: 388 VERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSAL 430
VE+ +E GEE R II L SPN + L+ +GNYVIQ L
Sbjct: 723 VEKS-IEFGEESQRRQIISTLTSPNDRGESPLLGLMRDQYGNYVIQKVL 770
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 117/245 (47%), Gaps = 11/245 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+++AL+ YGCR +Q+ + + ++ + E+ + V + + D GN+V+QK +E
Sbjct: 562 MKGHVLALSTQMYGCRVVQKALEHILTDQQASMVKELENHVLKCVRDQNGNHVIQKAIER 621
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ + ++ Q+ R+ + +G R + ++LE+ + S +LA L L
Sbjct: 622 VPSQ---YVQFIINAFKGQVNRLAAHPYGCRVIQRMLEHCEEEDRES-ILAELHACTTHL 677
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
D G+YVIQ+ +++ +D ++ V + K V++ +E+ + +QR +
Sbjct: 678 IPDQFGNYVIQHVIENGEEKDRSRMITIVLSQLLVYSKHKFASNVVEKSIEFGEESQRRQ 737
Query: 331 LVAEIIANA-------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+++ + + L L D YGNYV+Q +L + L+ Q+ Y
Sbjct: 738 IISTLTSPNDRGESPLLGLMRDQYGNYVIQKVLGQLKGEEREGLIEQIRPLLSQLKKFSY 797
Query: 384 GSNVV 388
G +V
Sbjct: 798 GKQIV 802
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S + +Y L ++ ++ + D+ G +Q +E + ++E++ EI N L L D +
Sbjct: 479 SKGNKRYELKDIYNHIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVF 538
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYVVQ L L Q++GH ++ S YG VV++ L +Q ++ EL
Sbjct: 539 GNYVVQKLFEHGNQSQKKILANQMKGHVLALSTQMYGCRVVQKALEHILTDQQASMVKEL 598
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 599 EN--HVLKCVRDQNGNHVIQKAI 619
>gi|268562677|ref|XP_002646736.1| Hypothetical protein CBG13130 [Caenorhabditis briggsae]
Length = 514
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 149/293 (50%), Gaps = 14/293 (4%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
L D+RG ++ AKDQ G R +Q+ + E + IF EV+D EL+ D FGNYVVQK
Sbjct: 175 KLSDVRGMLLKFAKDQVGSRFIQQKLEFCDINEKDAIFDEVVDNAAELVDDIFGNYVVQK 234
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E E+ TR++ + + ++ + R + K LE + P QI +L+ +R
Sbjct: 235 FFEYGEEKHWTRLVDAVVD---RVPEYAFQMYACRVLQKALEKVNEPLQIK-ILSQIRHV 290
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLN---EVADNCYGIATDKSGCCVLQHCVEYS 323
KD NG++VIQ ++ S + ++++N E DN + ++ D GC V+Q C+E+
Sbjct: 291 IHRCMKDQNGNHVIQKAIEKVSPQYIQFIVNTLMENPDNIFDMSVDPYGCRVVQRCLEHC 350
Query: 324 KGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+Q ++ I +A + YGNYVVQH++ ++ ++ + F+ +KY
Sbjct: 351 IASQTRPIIERIHERFDDIANNQYGNYVVQHVILHGTEADRLLIVTRVSENLFDFASHKY 410
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRS------PNVSMLLMHPFGNYVIQSAL 430
SNV+E+C LE G II+ S P V ++ + NYV+Q
Sbjct: 411 SSNVIEKC-LERGSIHHKNIIVRAACSQPDGTMPIVVQMMKDQYANYVVQKMF 462
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 102/235 (43%), Gaps = 8/235 (3%)
Query: 163 YGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLM 222
Y CR LQ+ + + + I ++ + M D GN+V+QK +E S + I+
Sbjct: 263 YACRVLQKALEKVNEPLQIKILSQIRHVIHRCMKDQNGNHVIQKAIEKVSPQYIQFIVNT 322
Query: 223 LTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQY 282
L + + + ++ +G R V + LE+ Q ++ + + + G+YV+Q+
Sbjct: 323 LMENPDNIFDMSVDPYGCRVVQRCLEHCI-ASQTRPIIERIHERFDDIANNQYGNYVVQH 381
Query: 283 CVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIAN---- 338
+ H + D ++ V++N + A+ K V++ C+E + +V +
Sbjct: 382 VILHGTEADRLLIVTRVSENLFDFASHKYSSNVIEKCLERGSIHHKNIIVRAACSQPDGT 441
Query: 339 ---ALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ + +D Y NYVVQ + P+ L+ + H +G +++ +
Sbjct: 442 MPIVVQMMKDQYANYVVQKMFEQVTPEQRRELILTVRSHIPILRQFAHGKHILAK 496
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++Q F ++L + NI ++ D YGCR +QR + + I + +R ++
Sbjct: 314 QYIQ--FIVNTLMENPDNIFDMSVDPYGCRVVQRCLEHCIASQTRPIIERIHERFDDIAN 371
Query: 197 DPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQI 256
+ +GNYVVQ ++ +E R LL++T L + + + K LE + +
Sbjct: 372 NQYGNYVVQHVILHGTEADR---LLIVTRVSENLFDFASHKYSSNVIEKCLERGSIHHKN 428
Query: 257 SLVLAA------LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLL 296
+V AA P V + KD +YV+Q + + E + L+
Sbjct: 429 IIVRAACSQPDGTMPIVVQMMKDQYANYVVQKMFEQVTPEQRRELI 474
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 81/221 (36%), Gaps = 42/221 (19%)
Query: 251 TNPQQI-SLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATD 309
+NP + L L+ +R + KD G IQ ++ + + +EV DN + D
Sbjct: 166 SNPSMMKGLKLSDVRGMLLKFAKDQVGSRFIQQKLEFCDINEKDAIFDEVVDNAAELVDD 225
Query: 310 KSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY---------------------- 347
G V+Q EY + RLV ++ A Y
Sbjct: 226 IFGNYVVQKFFEYGEEKHWTRLVDAVVDRVPEYAFQMYACRVLQKALEKVNEPLQIKILS 285
Query: 348 --------------GNYVVQHLLALRVPQITASLLRQL---EGHYVSFSCNKYGSNVVER 390
GN+V+Q + PQ ++ L + S + YG VV+R
Sbjct: 286 QIRHVIHRCMKDQNGNHVIQKAIEKVSPQYIQFIVNTLMENPDNIFDMSVDPYGCRVVQR 345
Query: 391 CLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALL 431
C LE TR IIE + + + +GNYV+Q +L
Sbjct: 346 C-LEHCIASQTRPIIERIHE-RFDDIANNQYGNYVVQHVIL 384
>gi|253741511|gb|EES98380.1| Pumilio-family RNA-binding protein, putative [Giardia intestinalis
ATCC 50581]
Length = 652
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 156/308 (50%), Gaps = 25/308 (8%)
Query: 160 KDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE-----LMIDPFGNYVVQKLVELCSEE 214
K+ GC+ LQ+ M P + ++ V + + L+I P GNY QK++E
Sbjct: 329 KESTGCKALQQYMVDFPDKSHYLLDVFITEYGTPSLMEGLLIHPAGNYCFQKIIEGSDAT 388
Query: 215 QRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG--AVTLTK 272
QR RILL++ + L IC N HG R++ KLLE ++ ++ ++ L G + L
Sbjct: 389 QRLRILLLIQDS---LFDICHNLHGTRSIQKLLERVSLDEEKAIFAQQLGTGDRIIKLIM 445
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV 332
D NG++ +Q C++ FS +D ++ +++ ++T + GCC++Q C++ AQR ++V
Sbjct: 446 DINGNHCVQRCIEAFSPKDCAFIYSQIVRELVLVSTHQHGCCIIQRCLDLCSEAQRVQIV 505
Query: 333 AEIIANALLLAEDCYGNYVVQHLL-----ALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
I + + L D +GNYV Q+ L L P T L+R + G K+ S+
Sbjct: 506 TAIKDHVMELIVDRFGNYVFQYSLEKASNGLCGPITTDDLIRPVLGQEAFLVNQKFSSHA 565
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL---------LVSKVRLF 438
+E+CL ++ I ++ S + L M FGNYVIQ A ++S+ R+
Sbjct: 566 IEKCLKYGSKKMRALITENVMASGSFLSLAMDKFGNYVIQKAFCDATDEQKKIISQ-RVL 624
Query: 439 SSPPISVC 446
+SP + C
Sbjct: 625 ASPEVMSC 632
>gi|241954858|ref|XP_002420150.1| RNA binding protein, putative; mRNA-binding protein involved in RNA
catabolism, putative [Candida dubliniensis CD36]
gi|223643491|emb|CAX42370.1| RNA binding protein, putative [Candida dubliniensis CD36]
Length = 943
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 155/306 (50%), Gaps = 33/306 (10%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+ + KDQ+G R +Q+ + +EE E IF E+ + ELM D FGNYV+QK
Sbjct: 592 LKDIHGHAIEFTKDQHGSRFIQQKLPEATEEEKETIFNEIWEISYELMTDVFGNYVIQKY 651
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + Q+ +L + + + L +G R V + LE + N Q+ ++ L+
Sbjct: 652 FEYGTTTQKQVLLESMIG---HIHELSLQMYGCRVVQRALEAIDNEGQLRII-EELKNHI 707
Query: 268 VTLTKDTNGHYVIQYCV---KHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+ KD NG++VIQ + K FS +Y+L + + Y ++T GC V+Q +EYS
Sbjct: 708 LICCKDQNGNHVIQKSIEKIKPFSQ--IRYILTSLDNQIYHLSTHPYGCRVIQRLLEYSD 765
Query: 325 GAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
++ +++++ L D YGNYV+QH+L + +L + G V FS +K+
Sbjct: 766 INDQKFILSQLNNFLYYLILDQYGNYVIQHILENGTSEEKEPILEIVLGSVVQFSKHKFA 825
Query: 385 SNVVERCLLESGEEQSTRIIIELL-----------------------RSPNVSMLLMHPF 421
SNV+E+C+ Q RI+ E++ SP +++++ F
Sbjct: 826 SNVIEKCIKFGDTNQRQRILHEVMIGNEKMLSNNDDDNSDNDEPVKEDSP-LALMVKDQF 884
Query: 422 GNYVIQ 427
GNYVIQ
Sbjct: 885 GNYVIQ 890
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 112/233 (48%), Gaps = 27/233 (11%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L + G+I L+ YGCR +QR + ++ E I E+ + + D GN+V+QK
Sbjct: 664 LESMIGHIHELSLQMYGCRVVQRALEAIDNEGQLRIIEELKNHILICCKDQNGNHVIQKS 723
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E + ++I +LT+ D Q+ + + +G R + +LLE ++ +L+ L
Sbjct: 724 IEKI--KPFSQIRYILTSLDNQIYHLSTHPYGCRVIQRLLE-YSDINDQKFILSQLNNFL 780
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
L D G+YVIQ+ +++ + E+ + +L V + + K V++ C+++ Q
Sbjct: 781 YYLILDQYGNYVIQHILENGTSEEKEPILEIVLGSVVQFSKHKFASNVIEKCIKFGDTNQ 840
Query: 328 RERLVAEI-IANA-----------------------LLLAEDCYGNYVVQHLL 356
R+R++ E+ I N L+ +D +GNYV+Q L+
Sbjct: 841 RQRILHEVMIGNEKMLSNNDDDNSDNDEPVKEDSPLALMVKDQFGNYVIQKLV 893
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 6/202 (2%)
Query: 231 VRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHE 290
+ + HG R + + L T ++ + + + L D G+YVIQ ++ +
Sbjct: 600 IEFTKDQHGSRFIQQKLPEATEEEK-ETIFNEIWEISYELMTDVFGNYVIQKYFEYGTTT 658
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ LL + + + ++ GC V+Q +E + R++ E+ + L+ +D GN+
Sbjct: 659 QKQVLLESMIGHIHELSLQMYGCRVVQRALEAIDNEGQLRIIEELKNHILICCKDQNGNH 718
Query: 351 VVQHLLALRVP--QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL 408
V+Q + P QI +L L+ S + YG V++R LLE + + I+ L
Sbjct: 719 VIQKSIEKIKPFSQIRY-ILTSLDNQIYHLSTHPYGCRVIQR-LLEYSDINDQKFILSQL 776
Query: 409 RSPNVSMLLMHPFGNYVIQSAL 430
+ + L++ +GNYVIQ L
Sbjct: 777 NN-FLYYLILDQYGNYVIQHIL 797
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 4/146 (2%)
Query: 294 YLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQ 353
Y L ++ + D+ G +Q + + ++E + EI + L D +GNYV+Q
Sbjct: 590 YQLKDIHGHAIEFTKDQHGSRFIQQKLPEATEEEKETIFNEIWEISYELMTDVFGNYVIQ 649
Query: 354 HLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNV 413
LL + GH S YG VV+R L E RII EL ++
Sbjct: 650 KYFEYGTTTQKQVLLESMIGHIHELSLQMYGCRVVQRALEAIDNEGQLRIIEELKN--HI 707
Query: 414 SMLLMHPFGNYVIQSALLVSKVRLFS 439
+ GN+VIQ + + K++ FS
Sbjct: 708 LICCKDQNGNHVIQKS--IEKIKPFS 731
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 26/172 (15%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L L I L+ YGCR +QR + + + I ++ + + L++D +GNYV+Q +
Sbjct: 737 LTSLDNQIYHLSTHPYGCRVIQRLLEYSDINDQKFILSQLNNFLYYLILDQYGNYVIQHI 796
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL---- 263
+E + E++ IL ++ Q + ++ I +K + TN +Q L +
Sbjct: 797 LENGTSEEKEPILEIVLGSVVQFSKHKFASNVIEKCIKFGD--TNQRQRILHEVMIGNEK 854
Query: 264 -------------------RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLL 296
P A+ + KD G+YVIQ V+ F E+ K L+
Sbjct: 855 MLSNNDDDNSDNDEPVKEDSPLAL-MVKDQFGNYVIQKLVEAFDGEERKLLI 905
>gi|366987709|ref|XP_003673621.1| hypothetical protein NCAS_0A06820 [Naumovozyma castellii CBS 4309]
gi|342299484|emb|CCC67240.1| hypothetical protein NCAS_0A06820 [Naumovozyma castellii CBS 4309]
Length = 831
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 160/311 (51%), Gaps = 29/311 (9%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPK-EEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+L+D+ GN + KDQYG R +Q +S+ E E+IF E+ D L D FGNYV+Q
Sbjct: 482 TLKDIFGNTLEFCKDQYGSRFIQHELSTTSSPSEREVIFNELRDEAISLSNDVFGNYVIQ 541
Query: 206 KLVELCSEEQRTRILLMLTNDDF--QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL 263
K E S QR ++ D F ++ + L + R + K LE + Q++ LV + L
Sbjct: 542 KFFEFGSVTQRDILV-----DQFKGKMQNLSLQMYACRVIQKALEFIKPDQRLELV-SEL 595
Query: 264 RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
+ + KD NG++VIQ ++ +D ++L+ + + Y ++T GC V+Q +E+
Sbjct: 596 SQCVLQMIKDQNGNHVIQKAIECIPMKDLPFILDSLHGHIYHLSTHSYGCRVIQRLLEFG 655
Query: 324 KGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRV--PQITASLLRQ-------LEGH 374
+ +++E+ L +D YGNYV+QH+L + P ++ ++ + +
Sbjct: 656 SLEDQTLILSELKDFIPYLIQDQYGNYVIQHILEQQDNNPNVSQEMMNTKQEIVNIVSQN 715
Query: 375 YVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLR---------SPNVSMLLM--HPFGN 423
V FS +K+ SNVVER +L E+Q II ++L N M+LM F N
Sbjct: 716 VVEFSKHKFASNVVERAILYGNEKQRNLIIRQILPRDKAHAENLEDNAPMILMMRDQFAN 775
Query: 424 YVIQSALLVSK 434
YV+Q + VS+
Sbjct: 776 YVVQKLVTVSE 786
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 136 NQWLQDSFDCSSLRDL-------RGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q + +C ++DL G+I L+ YGCR +QR + E+ +I E+
Sbjct: 609 NHVIQKAIECIPMKDLPFILDSLHGHIYHLSTHSYGCRVIQRLLEFGSLEDQTLILSELK 668
Query: 189 DRVCELMIDPFGNYVVQKLVE 209
D + L+ D +GNYV+Q ++E
Sbjct: 669 DFIPYLIQDQYGNYVIQHILE 689
>gi|68489418|ref|XP_711460.1| hypothetical protein CaO19.9361 [Candida albicans SC5314]
gi|68489451|ref|XP_711443.1| hypothetical protein CaO19.1795 [Candida albicans SC5314]
gi|46432746|gb|EAK92215.1| hypothetical protein CaO19.1795 [Candida albicans SC5314]
gi|46432764|gb|EAK92232.1| hypothetical protein CaO19.9361 [Candida albicans SC5314]
Length = 929
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 155/302 (51%), Gaps = 29/302 (9%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+ + KDQ+G R +Q+ + +EE E IF E+ + ELM D FGNYV+QK
Sbjct: 582 LKDIYGHAIEFTKDQHGSRFIQQKLPEATEEEKETIFNEIWEISYELMTDVFGNYVIQKY 641
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + Q+ +L + + + L +G R V + LE + N Q+ ++ L+
Sbjct: 642 FEYGTTTQKQVLLESMIG---HIHELSLQMYGCRVVQRALEAIDNEGQLRII-EELKDHI 697
Query: 268 VTLTKDTNGHYVIQYCV---KHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+ KD NG++VIQ + K FS +Y+L + + Y ++T GC V+Q +EYS
Sbjct: 698 LICCKDQNGNHVIQKSIEKIKPFSQ--IRYILTSLDNQIYHLSTHPYGCRVIQRLLEYSD 755
Query: 325 GAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
++ +++++ L D YGNYV+QH+L + +L + G V FS +K+
Sbjct: 756 IDDQKLILSQLNNFLYYLILDQYGNYVIQHILENGTQEEKEPILEIVLGSVVQFSKHKFA 815
Query: 385 SNVVERCLLESGEEQSTRIIIELL-------------------RSPNVSMLLMHPFGNYV 425
SNV+E+C+ Q RI+ E++ SP +++++ FGNYV
Sbjct: 816 SNVIEKCIKFGDINQRKRILHEVMLGNETILGDDDIDGEPVKEDSP-LALMVKDQFGNYV 874
Query: 426 IQ 427
IQ
Sbjct: 875 IQ 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 113/229 (49%), Gaps = 23/229 (10%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L + G+I L+ YGCR +QR + ++ E I E+ D + D GN+V+QK
Sbjct: 654 LESMIGHIHELSLQMYGCRVVQRALEAIDNEGQLRIIEELKDHILICCKDQNGNHVIQKS 713
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E + ++I +LT+ D Q+ + + +G R + +LLE ++ L+L+ L
Sbjct: 714 IEKI--KPFSQIRYILTSLDNQIYHLSTHPYGCRVIQRLLE-YSDIDDQKLILSQLNNFL 770
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
L D G+YVIQ+ +++ + E+ + +L V + + K V++ C+++ Q
Sbjct: 771 YYLILDQYGNYVIQHILENGTQEEKEPILEIVLGSVVQFSKHKFASNVIEKCIKFGDINQ 830
Query: 328 RERLVAEI-IANALLLAED-------------------CYGNYVVQHLL 356
R+R++ E+ + N +L +D +GNYV+Q L+
Sbjct: 831 RKRILHEVMLGNETILGDDDIDGEPVKEDSPLALMVKDQFGNYVIQKLV 879
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 6/202 (2%)
Query: 231 VRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHE 290
+ + HG R + + L T ++ + + + L D G+YVIQ ++ +
Sbjct: 590 IEFTKDQHGSRFIQQKLPEATEEEK-ETIFNEIWEISYELMTDVFGNYVIQKYFEYGTTT 648
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ LL + + + ++ GC V+Q +E + R++ E+ + L+ +D GN+
Sbjct: 649 QKQVLLESMIGHIHELSLQMYGCRVVQRALEAIDNEGQLRIIEELKDHILICCKDQNGNH 708
Query: 351 VVQHLLALRVP--QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL 408
V+Q + P QI +L L+ S + YG V++R LLE + ++I+ L
Sbjct: 709 VIQKSIEKIKPFSQIRY-ILTSLDNQIYHLSTHPYGCRVIQR-LLEYSDIDDQKLILSQL 766
Query: 409 RSPNVSMLLMHPFGNYVIQSAL 430
+ + L++ +GNYVIQ L
Sbjct: 767 NNF-LYYLILDQYGNYVIQHIL 787
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 4/146 (2%)
Query: 294 YLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQ 353
Y L ++ + D+ G +Q + + ++E + EI + L D +GNYV+Q
Sbjct: 580 YQLKDIYGHAIEFTKDQHGSRFIQQKLPEATEEEKETIFNEIWEISYELMTDVFGNYVIQ 639
Query: 354 HLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNV 413
LL + GH S YG VV+R L E RII EL ++
Sbjct: 640 KYFEYGTTTQKQVLLESMIGHIHELSLQMYGCRVVQRALEAIDNEGQLRIIEEL--KDHI 697
Query: 414 SMLLMHPFGNYVIQSALLVSKVRLFS 439
+ GN+VIQ + + K++ FS
Sbjct: 698 LICCKDQNGNHVIQKS--IEKIKPFS 721
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L L I L+ YGCR +QR + ++ ++I ++ + + L++D +GNYV+Q +
Sbjct: 727 LTSLDNQIYHLSTHPYGCRVIQRLLEYSDIDDQKLILSQLNNFLYYLILDQYGNYVIQHI 786
Query: 208 VELCSEEQRTRILLMLTNDDFQ---------LVRICLNTHGIRAVLKLL-------ENLT 251
+E ++E++ IL ++ Q ++ C+ I ++L E +
Sbjct: 787 LENGTQEEKEPILEIVLGSVVQFSKHKFASNVIEKCIKFGDINQRKRILHEVMLGNETIL 846
Query: 252 NPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLL 296
I + KD G+YVIQ V+ F ++ K L+
Sbjct: 847 GDDDIDGEPVKEDSPLALMVKDQFGNYVIQKLVEAFDGDERKLLI 891
>gi|327355572|gb|EGE84429.1| mRNA binding protein Pumilio 2 [Ajellomyces dermatitidis ATCC
18188]
Length = 906
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 149/288 (51%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ +IV + DQ+G R +Q + S +E + +F E+ +LM D FGNYVVQKL
Sbjct: 486 LKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNSLQLMTDVFGNYVVQKL 545
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ RIL ++ + +G R V K LE++ QQ S+V L
Sbjct: 546 FEHGNQSQK-RILANQMKG--HILALSTQMYGCRVVQKALEHILTDQQASMV-KELENHV 601
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ D NG++VIQ V+ ++++N + A GC V+Q +E+ K
Sbjct: 602 LKCVNDQNGNHVIQKAVERVPTVHIRFIINAFKGQVHQWAAHSYGCRVIQRMLEHCKEPD 661
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R+ ++AE+ A A L D +GNYV+QH++ A ++ + + FS +K+ SNV
Sbjct: 662 RQAILAELHACAASLIPDTFGNYVIQHVIENGEEHDKAKIISIVISRLLVFSKHKFASNV 721
Query: 388 VERCLLESGEEQSTRIIIELL----RSPNVSMLLM-HPFGNYVIQSAL 430
VE+ + E Q T I+ +L R N + LM +GNYV+Q+ L
Sbjct: 722 VEKSIEFGAEGQRTEILRQLTTPNDRGENPLLSLMGDQYGNYVVQTVL 769
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 128/255 (50%), Gaps = 15/255 (5%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+I+AL+ YGCR +Q+ + + ++ + E+ + V + + D GN+V+QK VE
Sbjct: 561 MKGHILALSTQMYGCRVVQKALEHILTDQQASMVKELENHVLKCVNDQNGNHVIQKAVER 620
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
I ++ Q+ + +++G R + ++LE+ P + +LA L A +L
Sbjct: 621 VPT---VHIRFIINAFKGQVHQWAAHSYGCRVIQRMLEHCKEPDR-QAILAELHACAASL 676
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
DT G+YVIQ+ +++ D +++ V + K V++ +E+ QR
Sbjct: 677 IPDTFGNYVIQHVIENGEEHDKAKIISIVISRLLVFSKHKFASNVVEKSIEFGAEGQRTE 736
Query: 331 LVAEIIA------NALL-LAEDCYGNYVVQHLLA-LRVPQITASLLRQLEGHYVSFSCNK 382
++ ++ N LL L D YGNYVVQ +L L+ P+ A L++Q+E
Sbjct: 737 ILRQLTTPNDRGENPLLSLMGDQYGNYVVQTVLGELKGPEREA-LVKQIELQLPELKKTN 795
Query: 383 YGSNVV--ERCLLES 395
YG +V E+ + +S
Sbjct: 796 YGKQIVAIEKLIYDS 810
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S +Y L ++ ++ + D+ G +QH +E + +++++ EI N+L L D +
Sbjct: 478 SKNSKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNSLQLMTDVF 537
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYVVQ L L Q++GH ++ S YG VV++ L +Q ++ EL
Sbjct: 538 GNYVVQKLFEHGNQSQKRILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKEL 597
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 598 EN--HVLKCVNDQNGNHVIQKAV 618
>gi|322707325|gb|EFY98904.1| hypothetical protein MAA_06043 [Metarhizium anisopliae ARSEF 23]
Length = 852
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 152/289 (52%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ ++V + DQ+G R +Q+ + S +E + +F E+ +LM D FGNYVVQK
Sbjct: 454 LKDIYNHLVEFSGDQHGSRFIQQKLESANSDEKDQVFREIEPNAIQLMKDVFGNYVVQKF 513
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + ++V + + + R V K LE++ QQ L L P
Sbjct: 514 FEHGNQVQKKVLAEKMKG---KVVDLSVQVYACRVVQKALEHVLVEQQAELT-KELEPEI 569
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ + +D NG++V+Q ++ + +++N V +A+ GC V+Q +E+ +
Sbjct: 570 LRVIRDQNGNHVVQKIIELVPRQCIDFIMNAVRGQVTALASHTYGCRVIQRMLEHGTESD 629
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ ++ E+ A+A +L D YGNYV QH++ P+ A ++ + ++ S +K+ SNV
Sbjct: 630 KMEIMMELHASAQILITDQYGNYVAQHVIQNGKPEDRAQMIDLVMSQLLTLSKHKFASNV 689
Query: 388 VERCLLESGEEQSTRIIIELL------RSPNVSMLLMHPFGNYVIQSAL 430
VE+C+ EQ T I +L SP + ++ +GNYVIQ L
Sbjct: 690 VEKCIEHGTAEQRTSIREQLTTVGSDGTSP-LQQMMRDQYGNYVIQKLL 737
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 104/214 (48%), Gaps = 11/214 (5%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G +V L+ Y CR +Q+ + + E+ + E+ + ++ D GN+VVQK++EL
Sbjct: 529 MKGKVVDLSVQVYACRVVQKALEHVLVEQQAELTKELEPEILRVIRDQNGNHVVQKIIEL 588
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
R I ++ Q+ + +T+G R + ++LE+ T ++ +++ L A L
Sbjct: 589 VP---RQCIDFIMNAVRGQVTALASHTYGCRVIQRMLEHGTESDKMEIMME-LHASAQIL 644
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
D G+YV Q+ +++ ED +++ V ++ K V++ C+E+ QR
Sbjct: 645 ITDQYGNYVAQHVIQNGKPEDRAQMIDLVMSQLLTLSKHKFASNVVEKCIEHGTAEQRTS 704
Query: 331 LVAEIIANA-------LLLAEDCYGNYVVQHLLA 357
+ ++ + D YGNYV+Q LL
Sbjct: 705 IREQLTTVGSDGTSPLQQMMRDQYGNYVIQKLLG 738
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 2/192 (1%)
Query: 239 GIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNE 298
G+R+VL L+N L + V + D +G IQ ++ + ++ + E
Sbjct: 433 GVRSVLLDEFRLSNKSNKRYELKDIYNHLVEFSGDQHGSRFIQQKLESANSDEKDQVFRE 492
Query: 299 VADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLAL 358
+ N + D G V+Q E+ Q++ L ++ + L+ Y VVQ L
Sbjct: 493 IEPNAIQLMKDVFGNYVVQKFFEHGNQVQKKVLAEKMKGKVVDLSVQVYACRVVQKALEH 552
Query: 359 RVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLM 418
+ + A L ++LE + ++ G++VV++ ++E Q I+ +R V+ L
Sbjct: 553 VLVEQQAELTKELEPEILRVIRDQNGNHVVQK-IIELVPRQCIDFIMNAVRG-QVTALAS 610
Query: 419 HPFGNYVIQSAL 430
H +G VIQ L
Sbjct: 611 HTYGCRVIQRML 622
>gi|452821243|gb|EME28276.1| serine rich Pumilio family RNA binding domain pr otein [Galdieria
sulphuraria]
Length = 471
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 156/296 (52%), Gaps = 24/296 (8%)
Query: 152 RGNIVALAKDQYGCRHLQRTM---SSLPKEEIEMIFVEVIDRVCE----LMIDPFGNYVV 204
R +I L K ++GC+ L + SSL +EI ++ C M P N++
Sbjct: 145 RSDICKLVKQRHGCQLLLHQLQLGSSLASQEI-------METCCLHFGIWMKHPIANFLC 197
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL------ENLTNPQQISL 258
Q++ + SE+QR IL + L + L+T+ R V ++ EN IS
Sbjct: 198 QQVWKCLSEQQRMDILQRHWDI---LPKAALHTYSTRVVQVMISSCGEEENENRNVCISY 254
Query: 259 VLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQH 318
+ + L A L KD NG +VIQ+C ++S ED ++L + + +N +AT + GCC++Q
Sbjct: 255 LQSILSSVAKFLFKDVNGAHVIQHCFLYWSSEDNQFLYHTIQENFLELATHRQGCCMIQT 314
Query: 319 CVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSF 378
++++ +Q + + II + +L D +GNYVVQH+L + P+ ++++L+GH+
Sbjct: 315 SMDFACSSQLDDIATNIIQHIFVLIHDAFGNYVVQHILDSKNPRYIHDIMKKLQGHWYEM 374
Query: 379 SCNKYGSNVVERCLLESGEEQSTRIIIELLRS-PNVSMLLMHPFGNYVIQSALLVS 433
S K+ SN+ E+CL + Q +I EL + N+ LL +GNYVIQ L V+
Sbjct: 375 SMEKFSSNITEKCLQLAEATQRWEMIEELAQECSNIGNLLHDAYGNYVIQRMLQVA 430
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
L D G+YV+Q+ + + ++ ++ + Y ++ +K + + C++ ++ QR
Sbjct: 338 LIHDAFGNYVVQHILDSKNPRYIHDIMKKLQGHWYEMSMEKFSSNITEKCLQLAEATQRW 397
Query: 330 RLVAEII---ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
++ E+ +N L D YGNYV+Q +L + L +E ++ + S ++YG
Sbjct: 398 EMIEELAQECSNIGNLLHDAYGNYVIQRMLQVASQPQKIQLKECIEKYWNTLSRSRYGKQ 457
Query: 387 V 387
+
Sbjct: 458 I 458
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++ N + LA + GC +Q +M +++ I +I + L+ D FGNYVVQ +++
Sbjct: 295 IQENFLELATHRQGCCMIQTSMDFACSSQLDDIATNIIQHIFVLIHDAFGNYVVQHILDS 354
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ I+ L +++ +++ L+L E + I LA L
Sbjct: 355 KNPRYIHDIMKKLQGHWYEMSMEKFSSNITEKCLQLAEATQRWEMIE-ELAQECSNIGNL 413
Query: 271 TKDTNGHYVIQ 281
D G+YVIQ
Sbjct: 414 LHDAYGNYVIQ 424
>gi|157822487|ref|NP_001102154.1| pumilio homolog 1 [Rattus norvegicus]
gi|149024100|gb|EDL80597.1| pumilio 1 (Drosophila) (predicted) [Rattus norvegicus]
Length = 1189
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 847 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 906
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 907 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 963
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 964 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1023
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1024 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1083
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1084 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1136
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 832 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAY 891
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 892 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 950
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 951 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 1008
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 1009 GCRVIQRIL 1017
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 53/252 (21%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+RG++++LA YGCR +Q+ + +P ++ I + E+ V + + D GN+VVQK +
Sbjct: 922 IRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCI 981
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 982 E-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQH 1035
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++
Sbjct: 1036 TEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRT 1095
Query: 327 QRERLVAEI------------------IANALL-------------------------LA 343
+R L+ E+ AN ++ L
Sbjct: 1096 ERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLR 1155
Query: 344 EDCYGNYVVQHL 355
+ YG +++ L
Sbjct: 1156 KYTYGKHILAKL 1167
>gi|239614575|gb|EEQ91562.1| mRNA binding protein Pumilio 2 [Ajellomyces dermatitidis ER-3]
Length = 932
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 149/288 (51%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ +IV + DQ+G R +Q + S +E + +F E+ +LM D FGNYVVQKL
Sbjct: 512 LKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNSLQLMTDVFGNYVVQKL 571
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ RIL ++ + +G R V K LE++ QQ S+V L
Sbjct: 572 FEHGNQSQK-RILANQMKG--HILALSTQMYGCRVVQKALEHILTDQQASMV-KELENHV 627
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ D NG++VIQ V+ ++++N + A GC V+Q +E+ K
Sbjct: 628 LKCVNDQNGNHVIQKAVERVPTVHIRFIINAFKGQVHQWAAHSYGCRVIQRMLEHCKEPD 687
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R+ ++AE+ A A L D +GNYV+QH++ A ++ + + FS +K+ SNV
Sbjct: 688 RQAILAELHACAASLIPDTFGNYVIQHVIENGEEHDKAKIISIVISRLLVFSKHKFASNV 747
Query: 388 VERCLLESGEEQSTRIIIELL----RSPNVSMLLM-HPFGNYVIQSAL 430
VE+ + E Q T I+ +L R N + LM +GNYV+Q+ L
Sbjct: 748 VEKSIEFGAEGQRTEILRQLTTPNDRGENPLLSLMGDQYGNYVVQTVL 795
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 128/255 (50%), Gaps = 15/255 (5%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+I+AL+ YGCR +Q+ + + ++ + E+ + V + + D GN+V+QK VE
Sbjct: 587 MKGHILALSTQMYGCRVVQKALEHILTDQQASMVKELENHVLKCVNDQNGNHVIQKAVER 646
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
I ++ Q+ + +++G R + ++LE+ P + +LA L A +L
Sbjct: 647 VPT---VHIRFIINAFKGQVHQWAAHSYGCRVIQRMLEHCKEPDR-QAILAELHACAASL 702
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
DT G+YVIQ+ +++ D +++ V + K V++ +E+ QR
Sbjct: 703 IPDTFGNYVIQHVIENGEEHDKAKIISIVISRLLVFSKHKFASNVVEKSIEFGAEGQRTE 762
Query: 331 LVAEIIA------NALL-LAEDCYGNYVVQHLLA-LRVPQITASLLRQLEGHYVSFSCNK 382
++ ++ N LL L D YGNYVVQ +L L+ P+ A L++Q+E
Sbjct: 763 ILRQLTTPNDRGENPLLSLMGDQYGNYVVQTVLGELKGPEREA-LVKQIELQLPELKKTN 821
Query: 383 YGSNVV--ERCLLES 395
YG +V E+ + +S
Sbjct: 822 YGKQIVAIEKLIYDS 836
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S +Y L ++ ++ + D+ G +QH +E + +++++ EI N+L L D +
Sbjct: 504 SKNSKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNSLQLMTDVF 563
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYVVQ L L Q++GH ++ S YG VV++ L +Q ++ EL
Sbjct: 564 GNYVVQKLFEHGNQSQKRILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKEL 623
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 624 EN--HVLKCVNDQNGNHVIQKAV 644
>gi|156389181|ref|XP_001634870.1| predicted protein [Nematostella vectensis]
gi|156221958|gb|EDO42807.1| predicted protein [Nematostella vectensis]
Length = 342
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 154/293 (52%), Gaps = 9/293 (3%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
LRDL G+IV ++DQ+G R +Q+ + E ++F E++ LM D FGNYV+QK
Sbjct: 18 QLRDLAGHIVEFSQDQHGSRFIQQKLERATNGEKHLVFHEILPAAYSLMTDVFGNYVIQK 77
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E SEEQ+ + + ++ + L +G R + K LE + Q LV+ L
Sbjct: 78 FFEFGSEEQKHHLASCIRG---HVLPLALQMYGCRVIQKALECIPPNVQHELVME-LDGH 133
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ +++++ Y ++T GC V+Q +E+
Sbjct: 134 VLKCVKDQNGNHVVQKCIECVDPHALQFIIDAFQGQVYALSTHPYGCRVIQRILEHCLTE 193
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ L +D YGNYV+QH+L P+ + ++ QL G+ + S +K+ SN
Sbjct: 194 QTLPILNEMHDQTDRLVQDQYGNYVIQHVLEHGTPEDRSKIVMQLRGNILPLSQHKFASN 253
Query: 387 VVERCLLESGEEQSTRIIIELLRS---PNVSMLLMHP--FGNYVIQSALLVSK 434
VVE+C+ + + +I E+ + P+ ++ M F NYV+Q + V++
Sbjct: 254 VVEKCVSFASRTERALLIDEVCNTNDGPHNALYTMMKDQFANYVVQKMIDVAE 306
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 125/249 (50%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + +P + +E+ V + + D GN+VVQK +E
Sbjct: 94 IRGHVLPLALQMYGCRVIQKALECIPPNVQHELVMELDGHVLKCVKDQNGNHVVQKCIE- 152
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + + ++ D FQ L+TH G R + ++LE+ Q + +L +
Sbjct: 153 CVDPHALQFII----DAFQGQVYALSTHPYGCRVIQRILEHCLTEQTLP-ILNEMHDQTD 207
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H + ED ++ ++ N ++ K V++ CV ++ +R
Sbjct: 208 RLVQDQYGNYVIQHVLEHGTPEDRSKIVMQLRGNILPLSQHKFASNVVEKCVSFASRTER 267
Query: 329 ERLVAEII------ANALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ NAL + +D + NYVVQ ++ + P L+ ++ H +
Sbjct: 268 ALLIDEVCNTNDGPHNALYTMMKDQFANYVVQKMIDVAEPAQRKLLMHRIRPHVATLRKY 327
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 328 TYGKHILAK 336
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 92/186 (49%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + ++ L L V ++D +G IQ ++ ++ + + +E+ Y
Sbjct: 4 RLLEDFRNNRYPNIQLRDLAGHIVEFSQDQHGSRFIQQKLERATNGEKHLVFHEILPAAY 63
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q+ L + I + L LA YG V+Q L P +
Sbjct: 64 SLMTDVFGNYVIQKFFEFGSEEQKHHLASCIRGHVLPLALQMYGCRVIQKALECIPPNVQ 123
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
L+ +L+GH + ++ G++VV++C +E + + + II+ + V L HP+G
Sbjct: 124 HELVMELDGHVLKCVKDQNGNHVVQKC-IECVDPHALQFIIDAFQG-QVYALSTHPYGCR 181
Query: 425 VIQSAL 430
VIQ L
Sbjct: 182 VIQRIL 187
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 47/190 (24%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + AL+ YGCR +QR + E+ I E+ D+ L+
Sbjct: 160 QFIIDAF--------QGQVYALSTHPYGCRVIQRILEHCLTEQTLPILNEMHDQTDRLVQ 211
Query: 197 DPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVR------------------------ 232
D +GNYV+Q ++E + E R++I++ L + L +
Sbjct: 212 DQYGNYVIQHVLEHGTPEDRSKIVMQLRGNILPLSQHKFASNVVEKCVSFASRTERALLI 271
Query: 233 --ICLNTHG-------------IRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGH 277
+C G V++ + ++ P Q L++ +RP TL K T G
Sbjct: 272 DEVCNTNDGPHNALYTMMKDQFANYVVQKMIDVAEPAQRKLLMHRIRPHVATLRKYTYGK 331
Query: 278 YVIQYCVKHF 287
+++ K++
Sbjct: 332 HILAKLEKYY 341
>gi|313245253|emb|CBY40040.1| unnamed protein product [Oikopleura dioica]
Length = 525
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 148/290 (51%), Gaps = 5/290 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL ++V ++DQ+G R +Q+ + + E++F E++ L+ID FGNYV+QK
Sbjct: 193 LRDLVNHMVEFSQDQHGSRFIQQKLERCTPGDRELVFNEILSSSYNLIIDVFGNYVIQKF 252
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTN-PQQISLVLAALRPG 266
+E S EQR ++L + QL L +G R + K LE ++ P+ ++ L
Sbjct: 253 LEFGSVEQRVQLLNSIKGHVLQL---SLQMYGCRVIQKGLEAFSHLPEHQIDIVKELEGH 309
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q ++ E ++++ A Y ++T GC V+Q +E+
Sbjct: 310 VLKCVKDQNGNHVVQKVIECVPSEHLNFIVDAFAGQVYQLSTHPYGCRVIQRILEHCNTD 369
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q +++ EI L D YGNYVVQH+L + ++ G V + +K+ SN
Sbjct: 370 QTAQILDEIHPQTEQLTMDQYGNYVVQHILEHGRADDKTKITGEMRGRVVQLAQHKFASN 429
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMH-PFGNYVIQSALLVSKV 435
V+E+C+ S +I E+ S +M + NYV+Q L ++ +
Sbjct: 430 VIEKCVTSSSRTTRALMIDEVCGSSEALFTMMKDQYANYVVQKMLDIADM 479
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 127/250 (50%), Gaps = 13/250 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTM---SSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
L ++G+++ L+ YGCR +Q+ + S LP+ +I+++ E+ V + + D GN+VV
Sbjct: 265 LNSIKGHVLQLSLQMYGCRVIQKGLEAFSHLPEHQIDIV-KELEGHVLKCVKDQNGNHVV 323
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK++E E I+ +QL + +G R + ++LE+ N Q + +L +
Sbjct: 324 QKVIECVPSEHLNFIVDAFAGQVYQL---STHPYGCRVIQRILEH-CNTDQTAQILDEIH 379
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
P LT D G+YV+Q+ ++H +D + E+ +A K V++ CV S
Sbjct: 380 PQTEQLTMDQYGNYVVQHILEHGRADDKTKITGEMRGRVVQLAQHKFASNVIEKCVTSSS 439
Query: 325 GAQRERLVAEIIANA---LLLAEDCYGNYVVQHLLALR-VPQITASLLRQLEGHYVSFSC 380
R ++ E+ ++ + +D Y NYVVQ +L + +PQ L+ Q++ H +
Sbjct: 440 RTTRALMIDEVCGSSEALFTMMKDQYANYVVQKMLDIADMPQ-KRKLVSQMKPHINNLKR 498
Query: 381 NKYGSNVVER 390
YG +++ +
Sbjct: 499 YTYGKHIITK 508
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 40/224 (17%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
KLLE+ N + + L L V ++D +G IQ ++ + D + + NE+ + Y
Sbjct: 178 KLLEDFRNNKLPNPQLRDLVNHMVEFSQDQHGSRFIQQKLERCTPGDRELVFNEILSSSY 237
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLAL--RVPQ 362
+ D G V+Q +E+ QR +L+ I + L L+ YG V+Q L +P+
Sbjct: 238 NLIIDVFGNYVIQKFLEFGSVEQRVQLLNSIKGHVLQLSLQMYGCRVIQKGLEAFSHLPE 297
Query: 363 ITASLLRQLEGHYVS------------------------------------FSCNKYGSN 386
++++LEGH + S + YG
Sbjct: 298 HQIDIVKELEGHVLKCVKDQNGNHVVQKVIECVPSEHLNFIVDAFAGQVYQLSTHPYGCR 357
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
V++R L +Q+ +I+ E+ P L M +GNYV+Q L
Sbjct: 358 VIQRILEHCNTDQTAQILDEI--HPQTEQLTMDQYGNYVVQHIL 399
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVC-------ELMIDPFGNY 202
++RG +V LA+ ++ +++ ++S + ++ ID VC +M D + NY
Sbjct: 413 EMRGRVVQLAQHKFASNVIEKCVTSSSRTTRALM----IDEVCGSSEALFTMMKDQYANY 468
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQI 256
VVQK++++ Q+ +++ + L R H ++ L+ L N Q I
Sbjct: 469 VVQKMLDIADMPQKRKLVSQMKPHINNLKRYTYGKH----IITKLDKLVNEQNI 518
>gi|261196167|ref|XP_002624487.1| mRNA binding protein Pumilio 2 [Ajellomyces dermatitidis SLH14081]
gi|239587620|gb|EEQ70263.1| mRNA binding protein Pumilio 2 [Ajellomyces dermatitidis SLH14081]
Length = 932
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 149/288 (51%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ +IV + DQ+G R +Q + S +E + +F E+ +LM D FGNYVVQKL
Sbjct: 512 LKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNSLQLMTDVFGNYVVQKL 571
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ RIL ++ + +G R V K LE++ QQ S+V L
Sbjct: 572 FEHGNQSQK-RILANQMKG--HILALSTQMYGCRVVQKALEHILTDQQASMV-KELENHV 627
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ D NG++VIQ V+ ++++N + A GC V+Q +E+ K
Sbjct: 628 LKCVNDQNGNHVIQKAVERVPTVHIRFIINAFKGQVHQWAAHSYGCRVIQRMLEHCKEPD 687
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R+ ++AE+ A A L D +GNYV+QH++ A ++ + + FS +K+ SNV
Sbjct: 688 RQAILAELHACAASLIPDTFGNYVIQHVIENGEEHDKAKIISIVISRLLVFSKHKFASNV 747
Query: 388 VERCLLESGEEQSTRIIIELL----RSPNVSMLLM-HPFGNYVIQSAL 430
VE+ + E Q T I+ +L R N + LM +GNYV+Q+ L
Sbjct: 748 VEKSIEFGAEGQRTEILRQLTTPNDRGENPLLSLMGDQYGNYVVQTVL 795
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 128/255 (50%), Gaps = 15/255 (5%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+I+AL+ YGCR +Q+ + + ++ + E+ + V + + D GN+V+QK VE
Sbjct: 587 MKGHILALSTQMYGCRVVQKALEHILTDQQASMVKELENHVLKCVNDQNGNHVIQKAVER 646
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
I ++ Q+ + +++G R + ++LE+ P + +LA L A +L
Sbjct: 647 VPT---VHIRFIINAFKGQVHQWAAHSYGCRVIQRMLEHCKEPDR-QAILAELHACAASL 702
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
DT G+YVIQ+ +++ D +++ V + K V++ +E+ QR
Sbjct: 703 IPDTFGNYVIQHVIENGEEHDKAKIISIVISRLLVFSKHKFASNVVEKSIEFGAEGQRTE 762
Query: 331 LVAEIIA------NALL-LAEDCYGNYVVQHLLA-LRVPQITASLLRQLEGHYVSFSCNK 382
++ ++ N LL L D YGNYVVQ +L L+ P+ A L++Q+E
Sbjct: 763 ILRQLTTPNDRGENPLLSLMGDQYGNYVVQTVLGELKGPEREA-LVKQIELQLPELKKTN 821
Query: 383 YGSNVV--ERCLLES 395
YG +V E+ + +S
Sbjct: 822 YGKQIVAIEKLIYDS 836
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S +Y L ++ ++ + D+ G +QH +E + +++++ EI N+L L D +
Sbjct: 504 SKNSKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNSLQLMTDVF 563
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYVVQ L L Q++GH ++ S YG VV++ L +Q ++ EL
Sbjct: 564 GNYVVQKLFEHGNQSQKRILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKEL 623
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 624 EN--HVLKCVNDQNGNHVIQKAV 644
>gi|28972067|dbj|BAC65487.1| mKIAA0099 protein [Mus musculus]
Length = 1218
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 876 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 935
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 936 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 992
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 993 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1052
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1053 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1112
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1113 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1165
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 861 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAY 920
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 921 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 979
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 980 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 1037
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 1038 GCRVIQRIL 1046
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 53/252 (21%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+RG++++LA YGCR +Q+ + +P ++ I + E+ V + + D GN+VVQK +
Sbjct: 951 IRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCI 1010
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 1011 E-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQH 1064
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++
Sbjct: 1065 TEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRT 1124
Query: 327 QRERLVAEI------------------IANALL-------------------------LA 343
+R L+ E+ AN ++ L
Sbjct: 1125 ERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLR 1184
Query: 344 EDCYGNYVVQHL 355
+ YG +++ L
Sbjct: 1185 KYTYGKHILAKL 1196
>gi|148698188|gb|EDL30135.1| pumilio 1 (Drosophila), isoform CRA_b [Mus musculus]
Length = 1212
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 870 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 929
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 930 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 986
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 987 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1046
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1047 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1106
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1107 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1159
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 855 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAY 914
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 915 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 973
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 974 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 1031
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 1032 GCRVIQRIL 1040
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 53/252 (21%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+RG++++LA YGCR +Q+ + +P ++ I + E+ V + + D GN+VVQK +
Sbjct: 945 IRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCI 1004
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 1005 E-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQH 1058
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++
Sbjct: 1059 TEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRT 1118
Query: 327 QRERLVAEI------------------IANALL-------------------------LA 343
+R L+ E+ AN ++ L
Sbjct: 1119 ERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLR 1178
Query: 344 EDCYGNYVVQHL 355
+ YG +++ L
Sbjct: 1179 KYTYGKHILAKL 1190
>gi|11991652|gb|AAG42319.1|AF321909_1 pumilio 1 [Mus musculus]
Length = 1189
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 847 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 906
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 907 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 963
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 964 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1023
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1024 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1083
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1084 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1136
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 832 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAY 891
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 892 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 950
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 951 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 1008
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 1009 GCRVIQRIL 1017
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 53/252 (21%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+RG++++LA YGCR +Q+ + +P ++ I + E+ V + + D GN+VVQK +
Sbjct: 922 IRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCI 981
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 982 E-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQH 1035
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++
Sbjct: 1036 TEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRT 1095
Query: 327 QRERLVAEI------------------IANALL-------------------------LA 343
+R L+ E+ AN ++ L
Sbjct: 1096 ERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLR 1155
Query: 344 EDCYGNYVVQHL 355
+ YG +++ L
Sbjct: 1156 KYTYGKHILAKL 1167
>gi|295666323|ref|XP_002793712.1| mRNA binding protein Pumilio 2 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278006|gb|EEH33572.1| mRNA binding protein Pumilio 2 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 947
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 151/289 (52%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ +IV + DQ+G R +Q + S +E + +F E+ +LM D FGNYVVQKL
Sbjct: 529 LKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQLNSLQLMTDVFGNYVVQKL 588
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ RIL ++ + +G R V K LE++ QQ S+V L
Sbjct: 589 FEHGNQSQK-RILANQMKG--HILALSTQMYGCRVVQKALEHILTDQQASMV-KELENHV 644
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ V+ ++++N + +A GC V+Q +E+
Sbjct: 645 LKCVKDQNGNHVIQKAVERVPTVHIQFIINAFKGQVHRLAAHPYGCRVIQRMLEHCNEGD 704
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R+ ++AE+ + + L D +GNYV+QH+L ++ + + FS +K+ SNV
Sbjct: 705 RQAILAELHSCSAGLIPDQFGNYVIQHILENGEEHDKVKIISIVISQLLVFSKHKFASNV 764
Query: 388 VERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSAL 430
VE+ +E G E + I++LL +PN + L+ +GNYVIQ L
Sbjct: 765 VEKS-IEFGAEDQRKEILQLLTTPNDRGENPLLGLMRDQYGNYVIQKVL 812
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 103/215 (47%), Gaps = 11/215 (5%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
S +++L +++ KDQ G +Q+ + +P I+ I +V L P+G V+
Sbjct: 634 ASMVKELENHVLKCVKDQNGNHVIQKAVERVPTVHIQFIINAFKGQVHRLAAHPYGCRVI 693
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
Q+++E C+E R IL L + L+ + I+ +L+ E + IS+V++ L
Sbjct: 694 QRMLEHCNEGDRQAILAELHSCSAGLIPDQFGNYVIQHILENGEEHDKVKIISIVISQL- 752
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLL------NEVADN-CYGIATDKSGCCVLQ 317
+ +K V++ ++ + + K +L N+ +N G+ D+ G V+Q
Sbjct: 753 ---LVFSKHKFASNVVEKSIEFGAEDQRKEILQLLTTPNDRGENPLLGLMRDQYGNYVIQ 809
Query: 318 HCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
+ KG++RE LV++I + L + YG +V
Sbjct: 810 KVLGQLKGSERENLVSQIEPQLIHLKKFSYGKQIV 844
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ +Y L ++ ++ + D+ G +QH +E + +++++ EI N+L L D +GNY
Sbjct: 524 NKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQLNSLQLMTDVFGNY 583
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
VVQ L L Q++GH ++ S YG VV++ L +Q ++ EL
Sbjct: 584 VVQKLFEHGNQSQKRILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKELEN- 642
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 643 -HVLKCVKDQNGNHVIQKAV 661
>gi|227430384|ref|NP_001153076.1| pumilio homolog 1 isoform 3 [Mus musculus]
gi|29165749|gb|AAH48174.1| Pumilio 1 (Drosophila) [Mus musculus]
gi|74208613|dbj|BAE37564.1| unnamed protein product [Mus musculus]
Length = 1188
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 906 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 962
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 963 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1022
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1023 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1082
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1083 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1135
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 831 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAY 890
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 891 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 949
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 950 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 1007
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 1008 GCRVIQRIL 1016
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 53/252 (21%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+RG++++LA YGCR +Q+ + +P ++ I + E+ V + + D GN+VVQK +
Sbjct: 921 IRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCI 980
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 981 E-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQH 1034
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++
Sbjct: 1035 TEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRT 1094
Query: 327 QRERLVAEI------------------IANALL-------------------------LA 343
+R L+ E+ AN ++ L
Sbjct: 1095 ERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLR 1154
Query: 344 EDCYGNYVVQHL 355
+ YG +++ L
Sbjct: 1155 KYTYGKHILAKL 1166
>gi|74206258|dbj|BAE24888.1| unnamed protein product [Mus musculus]
Length = 1189
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 847 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 906
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 907 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 963
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 964 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1023
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1024 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1083
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1084 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1136
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 832 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAY 891
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 892 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 950
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 951 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 1008
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 1009 GCRVIQRIL 1017
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 53/252 (21%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+RG++++LA YGCR +Q+ + +P ++ I + E+ V + + D GN+VVQK +
Sbjct: 922 IRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCI 981
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 982 E-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQH 1035
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++
Sbjct: 1036 TEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRT 1095
Query: 327 QRERLVAEI------------------IANALL-------------------------LA 343
+R L+ E+ AN ++ L
Sbjct: 1096 ERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLR 1155
Query: 344 EDCYGNYVVQHL 355
+ YG +++ L
Sbjct: 1156 KYTYGKHILAKL 1167
>gi|227430380|ref|NP_109647.2| pumilio homolog 1 isoform 1 [Mus musculus]
gi|41688656|sp|Q80U78.2|PUM1_MOUSE RecName: Full=Pumilio homolog 1
gi|148698187|gb|EDL30134.1| pumilio 1 (Drosophila), isoform CRA_a [Mus musculus]
Length = 1189
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 847 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 906
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 907 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 963
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 964 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1023
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1024 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1083
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1084 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1136
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 832 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAY 891
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 892 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 950
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 951 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 1008
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 1009 GCRVIQRIL 1017
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 53/252 (21%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+RG++++LA YGCR +Q+ + +P ++ I + E+ V + + D GN+VVQK +
Sbjct: 922 IRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCI 981
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 982 E-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQH 1035
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++
Sbjct: 1036 TEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRT 1095
Query: 327 QRERLVAEI------------------IANALL-------------------------LA 343
+R L+ E+ AN ++ L
Sbjct: 1096 ERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLR 1155
Query: 344 EDCYGNYVVQHL 355
+ YG +++ L
Sbjct: 1156 KYTYGKHILAKL 1167
>gi|407928197|gb|EKG21067.1| hypothetical protein MPH_01611 [Macrophomina phaseolina MS6]
Length = 943
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 152/288 (52%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ I + DQ+G R +Q+ + + +E E +F E+ +LM D FGNYV+QK
Sbjct: 541 LKDIYDYICEFSGDQHGSRFIQQKLETANSDEKERVFKEIQPNAMQLMTDVFGNYVIQKF 600
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + Q+ RIL ++ + L +G R V K LE++ QQ +V L
Sbjct: 601 FEHGDQSQK-RILANKMKG--HVLTLSLQMYGCRVVQKALEHVLVDQQADMV-KELENNV 656
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ ++ + +++++ + ++ GC V+Q +E+ +
Sbjct: 657 LRCVKDQNGNHVIQKAIERVPAQHIQFIIDAFIGHVSSLSVHGYGCRVIQRMLEHCEEPA 716
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R +++E+ A A L D YGNYV QH++ P A+++ ++ ++F+ +K+ SNV
Sbjct: 717 RRAILSELHACAPTLIPDQYGNYVTQHIIEHGAPDDRAAIIEIVKTQLLAFAKHKFASNV 776
Query: 388 VERCLLESGEEQSTRIIIELLRS-----PNVSMLLMHPFGNYVIQSAL 430
VE+CL+ +++ I++++ + ML+ +GNYVIQ L
Sbjct: 777 VEKCLVFGSDDERREIMLKICEKTERGESTLVMLIKDGYGNYVIQKLL 824
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 4/161 (2%)
Query: 272 KDTNGHYVIQYCVKHFSH--EDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
+D +G + ++ F H +Y L ++ D + D+ G +Q +E + ++E
Sbjct: 515 QDESGIGLRSAMLEEFKHNSRSKRYELKDIYDYICEFSGDQHGSRFIQQKLETANSDEKE 574
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVE 389
R+ EI NA+ L D +GNYV+Q L +++GH ++ S YG VV+
Sbjct: 575 RVFKEIQPNAMQLMTDVFGNYVIQKFFEHGDQSQKRILANKMKGHVLTLSLQMYGCRVVQ 634
Query: 390 RCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ L +Q ++ EL NV + GN+VIQ A+
Sbjct: 635 KALEHVLVDQQADMVKELEN--NVLRCVKDQNGNHVIQKAI 673
>gi|400597485|gb|EJP65218.1| pumilio domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 809
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 150/288 (52%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ +V + DQ+G R +Q+ + + +E E +F E+ +LM D FGNYVVQK
Sbjct: 424 LKDIYSYVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIEPNAIQLMKDVFGNYVVQKF 483
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + ++V + + + R V K LE++ QQ L L P
Sbjct: 484 FEHGNQVQKKILAEKMRG---KVVDLSVQVYACRVVQKALEHVLVEQQAELT-KELSPDI 539
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ + +D NG++VIQ ++ + ++++ + G+A+ GC V+Q +EY
Sbjct: 540 IRVIRDQNGNHVIQKIIELVPRQYIDFIMDALRGQVTGLASHTYGCRVIQRMLEYGTETD 599
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ ++ E+ A+A +L D YGNYV QH++ P+ L++ + ++ S +K+ SNV
Sbjct: 600 KLEIMTELHASAQILITDQYGNYVAQHVIQNGKPEDRDKLIQLVMSQLLTLSKHKFASNV 659
Query: 388 VERCLLESGEEQSTRIIIELLR-----SPNVSMLLMHPFGNYVIQSAL 430
VE+C+ Q + I +L S + +++ +GNYVIQ L
Sbjct: 660 VEKCIEHGTPAQRSAIREQLTTVVSDGSSPLQLMMRDQYGNYVIQKLL 707
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 94/228 (41%), Gaps = 47/228 (20%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG +V L+ Y CR +Q+ + + E+ + E+ + ++ D GN+V+QK++EL
Sbjct: 499 MRGKVVDLSVQVYACRVVQKALEHVLVEQQAELTKELSPDIIRVIRDQNGNHVIQKIIEL 558
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
R I ++ Q+ + +T+G R + ++LE T ++ ++ L A L
Sbjct: 559 VP---RQYIDFIMDALRGQVTGLASHTYGCRVIQRMLEYGTETDKLE-IMTELHASAQIL 614
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK------ 324
D G+YV Q+ +++ ED L+ V ++ K V++ C+E+
Sbjct: 615 ITDQYGNYVAQHVIQNGKPEDRDKLIQLVMSQLLTLSKHKFASNVVEKCIEHGTPAQRSA 674
Query: 325 -------------------------------------GAQRERLVAEI 335
GA++E LV EI
Sbjct: 675 IREQLTTVVSDGSSPLQLMMRDQYGNYVIQKLLGQLHGAEKEILVDEI 722
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Query: 279 VIQYCVKHF---SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEI 335
V Y ++ F + + +Y L ++ + D+ G +Q +E + ++E++ EI
Sbjct: 404 VRSYLLEEFRQSNKSNKRYELKDIYSYVVEFSGDQHGSRFIQQKLETANSDEKEQVFREI 463
Query: 336 IANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLES 395
NA+ L +D +GNYVVQ L ++ G V S Y VV++ L
Sbjct: 464 EPNAIQLMKDVFGNYVVQKFFEHGNQVQKKILAEKMRGKVVDLSVQVYACRVVQKALEHV 523
Query: 396 GEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQ 427
EQ + EL SP++ ++ GN+VIQ
Sbjct: 524 LVEQQAELTKEL--SPDIIRVIRDQNGNHVIQ 553
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
LRG + LA YGCR +QR + + + I E+ L+ D +GNYV Q +++
Sbjct: 571 LRGQVTGLASHTYGCRVIQRMLEYGTETDKLEIMTELHASAQILITDQYGNYVAQHVIQN 630
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQ------QISLVLAALR 264
E R +++ ++ + QL+ + + V K +E+ T Q Q++ V++
Sbjct: 631 GKPEDRDKLIQLVMS---QLLTLSKHKFASNVVEKCIEHGTPAQRSAIREQLTTVVSDGS 687
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
+ +D G+YVIQ + + + L++E+ + +
Sbjct: 688 SPLQLMMRDQYGNYVIQKLLGQLHGAEKEILVDEIKPQFFSL 729
>gi|348571014|ref|XP_003471291.1| PREDICTED: pumilio homolog 1-like isoform 2 [Cavia porcellus]
Length = 1092
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 750 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 809
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 810 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 866
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 867 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 926
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 927 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 986
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 987 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1039
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 735 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAY 794
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 795 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 853
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 854 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 911
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 912 GCRVIQRIL 920
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 53/252 (21%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+RG++++LA YGCR +Q+ + +P ++ I + E+ V + + D GN+VVQK +
Sbjct: 825 IRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCI 884
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 885 E-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQH 938
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++
Sbjct: 939 TEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRT 998
Query: 327 QRERLVAEI------------------IANALL-------------------------LA 343
+R L+ E+ AN ++ L
Sbjct: 999 ERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLR 1058
Query: 344 EDCYGNYVVQHL 355
+ YG +++ L
Sbjct: 1059 KYTYGKHILAKL 1070
>gi|227430386|ref|NP_001153077.1| pumilio homolog 1 isoform 4 [Mus musculus]
gi|74145600|dbj|BAE36209.1| unnamed protein product [Mus musculus]
Length = 1092
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 750 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 809
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 810 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 866
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 867 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 926
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 927 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 986
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 987 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1039
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 735 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAY 794
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 795 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 853
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 854 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 911
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 912 GCRVIQRIL 920
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 53/252 (21%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+RG++++LA YGCR +Q+ + +P ++ I + E+ V + + D GN+VVQK +
Sbjct: 825 IRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCI 884
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 885 E-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQH 938
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++
Sbjct: 939 TEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRT 998
Query: 327 QRERLVAEI------------------IANALL-------------------------LA 343
+R L+ E+ AN ++ L
Sbjct: 999 ERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLR 1058
Query: 344 EDCYGNYVVQHL 355
+ YG +++ L
Sbjct: 1059 KYTYGKHILAKL 1070
>gi|169597459|ref|XP_001792153.1| hypothetical protein SNOG_01515 [Phaeosphaeria nodorum SN15]
gi|111070044|gb|EAT91164.1| hypothetical protein SNOG_01515 [Phaeosphaeria nodorum SN15]
Length = 917
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 145/288 (50%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ ++V A DQ+G R +Q+ + + E E IF E+ +LM D FGNYV+QK
Sbjct: 520 LPDIYDDVVEFAGDQHGSRFIQQKLETANSEVKERIFKELESNSLQLMQDVFGNYVIQKF 579
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + Q+ ++ + + + + R V K LE++ QQ S+V L
Sbjct: 580 FEHGDQTQKK---ILASKMKGHVSALANQMYACRVVQKALEHVLVDQQASMV-KELEKDV 635
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ + E + ++ + +A + GC V+Q +E Q
Sbjct: 636 LKTVKDQNGNHVIQKVIDRVPMEHIQVIVESFRGHIGVLAVNSYGCRVIQRLLEKVPEPQ 695
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R ++ E+ A L D YGNYV QH++ +P+ A ++ + +++FS +K+ SNV
Sbjct: 696 RRFIMTELHARGADLITDSYGNYVTQHVIEHGLPEDRAKIVSLITAQFLTFSKHKFASNV 755
Query: 388 VERCLLESGEEQSTRIIIELLRS-----PNVSMLLMHPFGNYVIQSAL 430
VERCL+ S +EQ ++ + N+ LL +GNYVIQ L
Sbjct: 756 VERCLVCSDDEQRRELVNAFIAKNERGENNLLNLLKDGYGNYVIQKLL 803
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 88/219 (40%), Gaps = 47/219 (21%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
S +++L +++ KDQ G +Q+ + +P E I++I + L ++ +G V+
Sbjct: 625 ASMVKELEKDVLKTVKDQNGNHVIQKVIDRVPMEHIQVIVESFRGHIGVLAVNSYGCRVI 684
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
Q+L+E E QR ++ L
Sbjct: 685 QRLLEKVPEPQR----------------------------------------RFIMTELH 704
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
L D+ G+YV Q+ ++H ED +++ + + K V++ C+ S
Sbjct: 705 ARGADLITDSYGNYVTQHVIEHGLPEDRAKIVSLITAQFLTFSKHKFASNVVERCLVCSD 764
Query: 325 GAQRERLVAEIIA-------NALLLAEDCYGNYVVQHLL 356
QR LV IA N L L +D YGNYV+Q LL
Sbjct: 765 DEQRRELVNAFIAKNERGENNLLNLLKDGYGNYVIQKLL 803
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 3/147 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ RG+I LA + YGCR +QR + +P+ + I E+ R +L+ D +GNYV Q +
Sbjct: 664 VESFRGHIGVLAVNSYGCRVIQRLLEKVPEPQRRFIMTELHARGADLITDSYGNYVTQHV 723
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E E R +I+ ++T + ++ + L ++ + ++ +A G
Sbjct: 724 IEHGLPEDRAKIVSLITAQFLTFSKHKFASNVVERCLVCSDDEQRRELVNAFIAKNERGE 783
Query: 268 ---VTLTKDTNGHYVIQYCVKHFSHED 291
+ L KD G+YVIQ ++ + +D
Sbjct: 784 NNLLNLLKDGYGNYVIQKLLETLNRDD 810
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S ++ L ++ D+ A D+ G +Q +E + +ER+ E+ +N+L L +D +
Sbjct: 512 SKTSKRWELPDIYDDVVEFAGDQHGSRFIQQKLETANSEVKERIFKELESNSLQLMQDVF 571
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYV+Q L +++GH + + Y VV++ L +Q ++ EL
Sbjct: 572 GNYVIQKFFEHGDQTQKKILASKMKGHVSALANQMYACRVVQKALEHVLVDQQASMVKEL 631
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
+ +V + GN+VIQ +
Sbjct: 632 EK--DVLKTVKDQNGNHVIQKVI 652
>gi|397646257|gb|EJK77194.1| hypothetical protein THAOC_00992 [Thalassiosira oceanica]
Length = 743
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 148/315 (46%), Gaps = 50/315 (15%)
Query: 163 YGCRHLQRTMSSLPKEE----IEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTR 218
YGC QR + LPKE+ I E + E M+DPFGNY+ QK++E + E+R
Sbjct: 230 YGC---QRHLIDLPKEDGPSAATAILNEGLTFWAEAMVDPFGNYLFQKILERITPEERVT 286
Query: 219 ILLMLTNDDFQLVRICLNTHGIRAVLKLLE------------------------------ 248
++ ++ +LV LN HG R+V K++E
Sbjct: 287 LVSSVST---RLVNASLNLHGTRSVQKIVEVCAIDEEDREDSDDDEEDSSESKSEAKSED 343
Query: 249 ----------NLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNE 298
++ ALRP A L D++G++ IQ + ++ T+++ +
Sbjct: 344 SDSKSAGKKKKKKKDSAAKILTDALRPSAARLCIDSHGNHAIQRILLKLPYQRTQFIFDA 403
Query: 299 VADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLAL 358
VA + +A + GCCV+Q C++ A R LV I+ +L L +D YGNYVVQ++L +
Sbjct: 404 VAASVEDVARHRHGCCVIQRCLDSRHSAARSHLVDRIVEKSLELMQDAYGNYVVQYVLDV 463
Query: 359 RVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLM 418
++ + G + K+ SNV+E+CL + + EL S + L+M
Sbjct: 464 CGDDEVHAICESVVGKVCVLAVQKFSSNVMEKCLERCTDRVREEYLNELNDSDRLRELMM 523
Query: 419 HPFGNYVIQSALLVS 433
PFGNYV+Q AL VS
Sbjct: 524 DPFGNYVVQRALSVS 538
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 84/191 (43%), Gaps = 6/191 (3%)
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
L ID GN+ +Q+++ L QRT+ + + + + HG + + L++
Sbjct: 372 AARLCIDSHGNHAIQRIL-LKLPYQRTQFIFDAVAASVE--DVARHRHGCCVIQRCLDSR 428
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
+ + LV + ++ L +D G+YV+QY + ++ + V +A K
Sbjct: 429 HSAARSHLVDRIVEK-SLELMQDAYGNYVVQYVLDVCGDDEVHAICESVVGKVCVLAVQK 487
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALL--LAEDCYGNYVVQHLLALRVPQITASLL 368
V++ C+E RE + E+ + L L D +GNYVVQ L++ L+
Sbjct: 488 FSSNVMEKCLERCTDRVREEYLNELNDSDRLRELMMDPFGNYVVQRALSVSTHAQAIRLV 547
Query: 369 RQLEGHYVSFS 379
++ H + S
Sbjct: 548 ETMKPHLSTSS 558
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 158 LAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRT 217
L +D YG +Q + +E+ I V+ +VC L + F + V++K +E C++ R
Sbjct: 447 LMQDAYGNYVVQYVLDVCGDDEVHAICESVVGKVCVLAVQKFSSNVMEKCLERCTDRVRE 506
Query: 218 RILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLV 259
L L ND +L + ++ G V + L T+ Q I LV
Sbjct: 507 EYLNEL-NDSDRLRELMMDPFGNYVVQRALSVSTHAQAIRLV 547
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 131 LSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
L +R Q++ D+ +S+ D+ A+ ++GC +QR + S + ++++
Sbjct: 392 LPYQRTQFIFDAV-AASVEDV-------ARHRHGCCVIQRCLDSRHSAARSHLVDRIVEK 443
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQ 215
ELM D +GNYVVQ ++++C +++
Sbjct: 444 SLELMQDAYGNYVVQYVLDVCGDDE 468
>gi|74184013|dbj|BAE37045.1| unnamed protein product [Mus musculus]
Length = 1108
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 157/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 768 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 827
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 828 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMV-RELDGHV 883
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 884 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 943
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 944 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1003
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1004 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1055
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 127/249 (51%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG++++LA YGCR +Q+ + +P ++ + E+ V + + D GN+VVQK +E
Sbjct: 843 IRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIE- 901
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 902 CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQHTE 956
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++ +R
Sbjct: 957 QLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTER 1016
Query: 329 ERLVAEIIA------NALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ +AL + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 1017 AVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKY 1076
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1077 TYGKHILAK 1085
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 753 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAY 812
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 813 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 872
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 873 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 930
Query: 425 VIQSAL 430
VIQ L
Sbjct: 931 VIQRIL 936
>gi|255553119|ref|XP_002517602.1| RNA binding protein, putative [Ricinus communis]
gi|223543234|gb|EEF44766.1| RNA binding protein, putative [Ricinus communis]
Length = 471
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 152/296 (51%), Gaps = 20/296 (6%)
Query: 154 NIVALAKDQYGCRHLQRTMSS----------LPKEEIEMIFVEVIDRVCELMIDPFGNYV 203
+ + A Q G +LQ +++ L K ++ + VI+ LM+D G +V
Sbjct: 143 SFIMFASTQQGSEYLQDLLATSDSYLTTSKILDKVTASVVGIPVINY---LMVDQHGYHV 199
Query: 204 VQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL 263
KL++ C++ Q T IL +T + Q VRIC +G + + KL++ + IS + +L
Sbjct: 200 CSKLIDSCNDIQLTLILERITKNTEQFVRICCAINGSKMIKKLIKKVKRSCLISYLTVSL 259
Query: 264 RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
G L + G YV+ +C+ + L +C +ATD GC ++
Sbjct: 260 YKGFYQLAINQIGSYVVVFCMDCLDIQQNALLYEAAISHCLILATDAIGCVSANKFIDRI 319
Query: 324 KGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+G++R+ L+ I NA+ L++D GN+VVQ +L L P I A + QL+GHYV S K+
Sbjct: 320 QGSRRQTLLELISDNAVFLSQDPSGNHVVQKVLGLENPIINAKIGAQLKGHYVRLSFQKW 379
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLM---HPFGNYVIQSALLVSKVR 436
GS+VVE+CL+ Q+ ++ L + S LL FGNYVIQ AL V+K +
Sbjct: 380 GSHVVEKCLV----SQAMVYAVQDLLTCGSSQLLQIARDQFGNYVIQKALKVTKKK 431
>gi|170088350|ref|XP_001875398.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650598|gb|EDR14839.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 380
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 164/294 (55%), Gaps = 13/294 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI-DRVCELMIDPFGNYVVQK 206
L+++ G I + DQ+G R +Q+ + + EE + +F EV+ L+ D FGNYV+QK
Sbjct: 45 LKNIFGYINEFSGDQHGSRFIQQKLETASPEERQTVFDEVMAGDPLALVQDVFGNYVIQK 104
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
++E + QR+ + ++ + F R+ L +G R + K +E+++ QQ SL++A L P
Sbjct: 105 MIEYGTSLQRSILTTVMEGNIF---RLSLQMYGCRVIQKAIEHISLEQQ-SLIVAELEPR 160
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ +D+NG++V+Q ++ + ++ + N Y ++ GC VLQ C+E+
Sbjct: 161 ILECVRDSNGNHVVQRLIEKVPSDRLSFVAS-FQGNVYDLSRHPYGCRVLQRCLEHLPEE 219
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q LV E+ NA+ L +D +GNYV+Q L+ + A ++ L+G + S +K+ SN
Sbjct: 220 QTRTLVDELHQNAVDLMKDQFGNYVIQFLVEHGQARDRALIVSNLQGKLLPMSRHKFASN 279
Query: 387 VVERCLLESGEEQSTRIIIELLR------SPNVSMLLMHPFGNYVIQSALLVSK 434
V E+ L+ + + +I E+L +P ++M + F NYV+Q ALLV++
Sbjct: 280 VCEKALICADPQTRRALIDEMLAIAPETITPIMTM-MQDQFANYVLQRALLVAE 332
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
S + +GN+ L++ YGCR LQR + LP+E+ + E+ +LM D FGNYV+Q
Sbjct: 187 SFVASFQGNVYDLSRHPYGCRVLQRCLEHLPEEQTRTLVDELHQNAVDLMKDQFGNYVIQ 246
Query: 206 KLVELCSEEQRTRI-------LLMLTNDDF-----QLVRICLNTHGIRAVLKLLENLTNP 253
LVE R I LL ++ F + IC + RA++ + + P
Sbjct: 247 FLVEHGQARDRALIVSNLQGKLLPMSRHKFASNVCEKALICADPQTRRALIDEMLAIA-P 305
Query: 254 QQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGC 313
+ I+ ++ T+ +D +YV+Q + + + L N V + T +
Sbjct: 306 ETITPIM--------TMMQDQFANYVLQRALLVAEGDQREELFNTVRQQL--VNTRRVSA 355
Query: 314 CVLQHCV 320
V +H V
Sbjct: 356 VVSKHVV 362
>gi|148698189|gb|EDL30136.1| pumilio 1 (Drosophila), isoform CRA_c [Mus musculus]
Length = 1215
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 157/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 875 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 934
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 935 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRE-LDGHV 990
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 991 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 1050
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 1051 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1110
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1111 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1162
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 127/249 (51%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG++++LA YGCR +Q+ + +P ++ + E+ V + + D GN+VVQK +E
Sbjct: 950 IRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIE- 1008
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 1009 CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQHTE 1063
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++ +R
Sbjct: 1064 QLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTER 1123
Query: 329 ERLVAEIIA------NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ +AL + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 1124 AVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKY 1183
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1184 TYGKHILAK 1192
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 860 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAY 919
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 920 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 979
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 980 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 1037
Query: 425 VIQSAL 430
VIQ L
Sbjct: 1038 VIQRIL 1043
>gi|159112491|ref|XP_001706474.1| Pumilio-family RNA-binding protein, putative [Giardia lamblia ATCC
50803]
gi|157434571|gb|EDO78800.1| Pumilio-family RNA-binding protein, putative [Giardia lamblia ATCC
50803]
Length = 652
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 150/294 (51%), Gaps = 15/294 (5%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVC-----ELMIDPFGNYVV 204
D +V K+ GC+ LQ+ ++ P + ++ V + + L+I P GNY
Sbjct: 319 DYERKLVLSFKEPTGCKILQQYLADFPDKSRYLLDVFIAEYSTPSLMESLLIHPSGNYCF 378
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK++E QR RILL++ + F IC N HG R++ KL E +++ ++ +++ L
Sbjct: 379 QKIIESSDASQRLRILLLIQDSLFD---ICQNLHGTRSIQKLFERVSSDEEKAIIAQQLG 435
Query: 265 PG--AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
G + L D NG++ +Q C++ F+ +D ++ +++ + T + GCC++Q C++
Sbjct: 436 AGDRIIKLIVDINGNHCVQRCIETFAPKDCTFIYDQIIRELVLVGTHQHGCCIIQRCLDL 495
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALR----VPQITA-SLLRQLEGHYVS 377
AQR ++V I + + L D +GNYV Q+ L I+A L+R + GH S
Sbjct: 496 CSEAQRVQIVTAIKNHVMELIVDRFGNYVFQYSLEKANNGLCGLISADDLIRPILGHEGS 555
Query: 378 FSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALL 431
K+ S+ VE+CL T I L+ S + M FGNYV+Q A +
Sbjct: 556 LVNQKFSSHAVEKCLKYGSRRMRTLITENLMASSSFLSSAMDKFGNYVVQKAFI 609
>gi|74180360|dbj|BAE32346.1| unnamed protein product [Mus musculus]
Length = 1092
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 157/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 752 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 811
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 812 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMV-RELDGHV 867
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 868 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 927
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 928 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 987
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 988 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1039
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 127/249 (51%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG++++LA YGCR +Q+ + +P ++ + E+ V + + D GN+VVQK +E
Sbjct: 827 IRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIE- 885
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 886 CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQHTE 940
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++ +R
Sbjct: 941 QLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTER 1000
Query: 329 ERLVAEIIA------NALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ +AL + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 1001 AVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKY 1060
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1061 TYGKHILAK 1069
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 737 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAY 796
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 797 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 856
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 857 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 914
Query: 425 VIQSAL 430
VIQ L
Sbjct: 915 VIQRIL 920
>gi|348571016|ref|XP_003471292.1| PREDICTED: pumilio homolog 1-like isoform 3 [Cavia porcellus]
Length = 944
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 157/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 604 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 663
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 664 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMV-RELDGHV 719
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 720 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 779
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 780 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 839
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLMHP--FGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 840 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 891
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 127/249 (51%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG++++LA YGCR +Q+ + +P ++ + E+ V + + D GN+VVQK +E
Sbjct: 679 IRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIE- 737
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 738 CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQHTE 792
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++ +R
Sbjct: 793 QLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTER 852
Query: 329 ERLVAEIIA------NALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ +AL + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 853 AVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKY 912
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 913 TYGKHILAK 921
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 589 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAY 648
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 649 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 708
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 709 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 766
Query: 425 VIQSAL 430
VIQ L
Sbjct: 767 VIQRIL 772
>gi|227430382|ref|NP_001153075.1| pumilio homolog 1 isoform 2 [Mus musculus]
gi|29748037|gb|AAH50747.1| Pum1 protein [Mus musculus]
Length = 1186
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 157/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 906 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRE-LDGHV 961
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 962 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 1021
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 1022 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1081
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1082 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1133
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 127/249 (51%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG++++LA YGCR +Q+ + +P ++ + E+ V + + D GN+VVQK +E
Sbjct: 921 IRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIE- 979
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 980 CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQHTE 1034
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++ +R
Sbjct: 1035 QLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTER 1094
Query: 329 ERLVAEIIA------NALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ +AL + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 1095 AVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKY 1154
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1155 TYGKHILAK 1163
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 831 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAY 890
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 891 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 950
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 951 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 1008
Query: 425 VIQSAL 430
VIQ L
Sbjct: 1009 VIQRIL 1014
>gi|348571012|ref|XP_003471290.1| PREDICTED: pumilio homolog 1-like isoform 1 [Cavia porcellus]
Length = 1186
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 157/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 906 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRE-LDGHV 961
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 962 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 1021
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 1022 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1081
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1082 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1133
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 127/249 (51%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG++++LA YGCR +Q+ + +P ++ + E+ V + + D GN+VVQK +E
Sbjct: 921 IRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIE- 979
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 980 CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQHTE 1034
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++ +R
Sbjct: 1035 QLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTER 1094
Query: 329 ERLVAEIIA------NALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ +AL + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 1095 AVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKY 1154
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1155 TYGKHILAK 1163
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 831 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAY 890
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 891 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 950
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 951 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 1008
Query: 425 VIQSAL 430
VIQ L
Sbjct: 1009 VIQRIL 1014
>gi|354472361|ref|XP_003498408.1| PREDICTED: pumilio homolog 1 isoform 2 [Cricetulus griseus]
Length = 1091
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 749 LREIVGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 808
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 809 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 865
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 866 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 925
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 926 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 985
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 986 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1038
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 734 RLLEDFRNNRYPNLQLREIVGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAY 793
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 794 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 852
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 853 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 910
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 911 GCRVIQRIL 919
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 53/252 (21%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+RG++++LA YGCR +Q+ + +P ++ I + E+ V + + D GN+VVQK +
Sbjct: 824 IRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCI 883
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 884 E-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQH 937
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++
Sbjct: 938 TEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRT 997
Query: 327 QRERLVAEI------------------IANALL-------------------------LA 343
+R L+ E+ AN ++ L
Sbjct: 998 ERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLR 1057
Query: 344 EDCYGNYVVQHL 355
+ YG +++ L
Sbjct: 1058 KYTYGKHILAKL 1069
>gi|392869402|gb|EJB11747.1| mRNA binding protein Pumilio 2 [Coccidioides immitis RS]
Length = 886
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 151/293 (51%), Gaps = 11/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ +IV + DQ+G R +Q+ + + +E E +F E+ +LM+D FGNYV+QKL
Sbjct: 491 LKDIYNHIVEFSGDQHGSRFIQQKLETANSDEKERVFQEIKPNAIQLMMDVFGNYVIQKL 550
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + ++ + +G R V K LE++ QQ ++V L
Sbjct: 551 FEHGNQAQKKALAQQMMG---HILNLSTQMYGCRVVQKALEHVLLDQQAAMV-KELENQV 606
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ ++ ++++N+ + A GC V+Q +E+ A
Sbjct: 607 IKCVKDQNGNHVIQKAIERVPQAHIQFIINDFSGQIQRWAVHSYGCRVIQRMLEHCNEAD 666
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R+ ++ E+ + L D +GNYV+QH++ + + ++ + V FS +K+ SNV
Sbjct: 667 RDAILGELHLCSASLIPDQFGNYVIQHVIENGRERDRSQMIAVVISQLVLFSKHKFASNV 726
Query: 388 VERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSALLVSK 434
VE+ LE G I+ + +PN + L+ FGNYVIQ L V K
Sbjct: 727 VEKT-LEFGRPNDRSEILRIFTTPNERGESPLEGLMKDQFGNYVIQKVLQVLK 778
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ +Y L ++ ++ + D+ G +Q +E + ++ER+ EI NA+ L D +GNY
Sbjct: 486 NKRYELKDIYNHIVEFSGDQHGSRFIQQKLETANSDEKERVFQEIKPNAIQLMMDVFGNY 545
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
V+Q L +L +Q+ GH ++ S YG VV++ L +Q ++ EL
Sbjct: 546 VIQKLFEHGNQAQKKALAQQMMGHILNLSTQMYGCRVVQKALEHVLLDQQAAMVKELEN- 604
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
V + GN+VIQ A+
Sbjct: 605 -QVIKCVKDQNGNHVIQKAI 623
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 24/187 (12%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ D G I A YGCR +QR + + + + I E+ L+ D FGNYV+Q +
Sbjct: 635 INDFSGQIQRWAVHSYGCRVIQRMLEHCNEADRDAILGELHLCSASLIPDQFGNYVIQHV 694
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL---- 263
+E E R++++ ++ + QLV + V K LE P S +L
Sbjct: 695 IENGRERDRSQMIAVVIS---QLVLFSKHKFASNVVEKTLE-FGRPNDRSEILRIFTTPN 750
Query: 264 ---RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCV 320
L KD G+YVIQ ++ ++ + L++++ +L H
Sbjct: 751 ERGESPLEGLMKDQFGNYVIQKVLQVLKGDEYQTLVDKI-------------VPLLSHLK 797
Query: 321 EYSKGAQ 327
++S G Q
Sbjct: 798 KHSHGKQ 804
>gi|79325269|ref|NP_001031720.1| pumilio 6 protein [Arabidopsis thaliana]
gi|332659729|gb|AEE85129.1| pumilio 6 protein [Arabidopsis thaliana]
Length = 858
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 154/309 (49%), Gaps = 27/309 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G+IV + R +Q+ + + EE +F E++ C+LM D FGNYV+QK
Sbjct: 530 LSDITGHIVEFS------RFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKF 583
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + QR + L Q+V + L +G R + K L+ + Q++ L L
Sbjct: 584 FEYGNSTQRKELADQLMG---QIVPLSLQMYGCRVIQKALDVIEPDQRVRLA-RELDGQV 639
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ C+++ + ++L ++ GC V+Q +E
Sbjct: 640 MRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDH 699
Query: 328 RERLVAE-IIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ R + E I+ + +L++D YGNYV QH+L + + R+L GH V S +K+ SN
Sbjct: 700 QCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASN 759
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVS-----MLLMHPFGNYVIQSAL----------L 431
V+E+C LE G +II+ + P+ S M++ +GNYV+Q L
Sbjct: 760 VIEKC-LEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRLTL 818
Query: 432 VSKVRLFSS 440
S+VR+ +S
Sbjct: 819 FSRVRMHAS 827
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 129/268 (48%), Gaps = 18/268 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G IV L+ YGCR +Q+ + + ++ + E+ +V + D GN+V+QK +E
Sbjct: 599 LMGQIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDGQVMRCVRDQNGNHVIQKCIEN 658
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ ++ ML Q+ + ++ +G R + +LLE ++ Q + + L
Sbjct: 659 IPAD---KVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILESVCVL 715
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+KD G+YV Q+ ++ + E+ + + +++ + ++ K V++ C+EY +R+
Sbjct: 716 SKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASNVIEKCLEYGGRVERDL 775
Query: 331 LVAEIIA------NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
++ EI + L++ +D YGNYVVQ + +L ++ H + YG
Sbjct: 776 IIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRLTLFSRVRMHASALKKYTYG 835
Query: 385 SNVVERCLLESGEEQSTRIIIELLRSPN 412
++V R EQ + IE ++ PN
Sbjct: 836 KHIVSRL------EQPS---IEGMKFPN 854
>gi|403293272|ref|XP_003937644.1| PREDICTED: pumilio homolog 1 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1044
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 702 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 761
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 762 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 818
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 819 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 878
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 879 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 938
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 939 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 991
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 755 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE 814
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 815 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 869
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 870 RILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 928
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 929 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 988
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 989 VAEPGQRKIVMHKIRPHIATLRKYTYGKHILAK 1021
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 687 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 746
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 747 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 805
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 806 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 863
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 864 GCRVIQRIL 872
>gi|296207290|ref|XP_002750600.1| PREDICTED: pumilio homolog 1 isoform 4 [Callithrix jacchus]
Length = 1044
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 702 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 761
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 762 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 818
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 819 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 878
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 879 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 938
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 939 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 991
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 755 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE 814
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 815 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 869
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 870 RILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 928
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 929 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 988
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 989 VAEPGQRKIVMHKIRPHIATLRKYTYGKHILAK 1021
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 687 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 746
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 747 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 805
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 806 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 863
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 864 GCRVIQRIL 872
>gi|449681928|ref|XP_002162083.2| PREDICTED: uncharacterized protein LOC100200828, partial [Hydra
magnipapillata]
Length = 940
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 145/268 (54%), Gaps = 8/268 (2%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L DL+ +IV ++DQ+G R +Q+ + E M+F E++ LM D FGNYV+QK
Sbjct: 677 LHDLQRHIVEFSQDQHGSRFIQQKLERASVLEKTMVFNEILSAAYSLMTDVFGNYVIQKF 736
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISL---VLAALR 264
E S EQ+ LL+ ++ + L +G R + K LE + P +I + ++ L
Sbjct: 737 FEFGSPEQK---LLLAQRIKGHVLPLALQMYGCRVIQKALETI--PSEIPIHGELVKELD 791
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+ KD NG++V+Q C++ +++++ Y ++T GC V+Q +E+
Sbjct: 792 GHVLKCVKDQNGNHVVQKCIECIDSTQLQFIIDAFQGQVYALSTHPYGCRVIQRILEHCT 851
Query: 325 GAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
Q ++AE+ + L +D YGNYV+QH+L P+ ++++ + G+ + S +K+
Sbjct: 852 QEQTAPILAELHEHTERLIQDQYGNYVIQHVLEHGSPEDKSTIVNIVRGNVLLLSQHKFA 911
Query: 385 SNVVERCLLESGEEQSTRIIIELLRSPN 412
SNV+E+C+ + ++ + +I E+ P+
Sbjct: 912 SNVIEKCVTHASRQERSLLIDEVTNYPD 939
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 230 LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSH 289
+V + HG R + + LE + ++ ++V + A +L D G+YVIQ + S
Sbjct: 684 IVEFSQDQHGSRFIQQKLERASVLEK-TMVFNEILSAAYSLMTDVFGNYVIQKFFEFGSP 742
Query: 290 EDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY--SKGAQRERLVAEIIANALLLAEDCY 347
E L + + +A GC V+Q +E S+ LV E+ + L +D
Sbjct: 743 EQKLLLAQRIKGHVLPLALQMYGCRVIQKALETIPSEIPIHGELVKELDGHVLKCVKDQN 802
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GN+VVQ + ++ +G + S + YG V++R L +EQ+ I+ EL
Sbjct: 803 GNHVVQKCIECIDSTQLQFIIDAFQGQVYALSTHPYGCRVIQRILEHCTQEQTAPILAEL 862
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
+ L+ +GNYVIQ L
Sbjct: 863 HE--HTERLIQDQYGNYVIQHVL 883
>gi|354472365|ref|XP_003498410.1| PREDICTED: pumilio homolog 1 isoform 4 [Cricetulus griseus]
Length = 1107
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 157/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 767 LREIVGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 826
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 827 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMV-RELDGHV 882
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 883 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 942
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 943 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1002
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1003 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1054
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 127/249 (51%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG++++LA YGCR +Q+ + +P ++ + E+ V + + D GN+VVQK +E
Sbjct: 842 IRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIE- 900
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 901 CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQHTE 955
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++ +R
Sbjct: 956 QLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTER 1015
Query: 329 ERLVAEIIA------NALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ +AL + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 1016 AVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKY 1075
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1076 TYGKHILAK 1084
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 752 RLLEDFRNNRYPNLQLREIVGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAY 811
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 812 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 871
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 872 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 929
Query: 425 VIQSAL 430
VIQ L
Sbjct: 930 VIQRIL 935
>gi|79609613|ref|NP_974618.2| pumilio 6 protein [Arabidopsis thaliana]
gi|332659728|gb|AEE85128.1| pumilio 6 protein [Arabidopsis thaliana]
Length = 855
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 154/309 (49%), Gaps = 27/309 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G+IV + R +Q+ + + EE +F E++ C+LM D FGNYV+QK
Sbjct: 530 LSDITGHIVEFS------RFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKF 583
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + QR + L Q+V + L +G R + K L+ + Q++ L L
Sbjct: 584 FEYGNSTQRKELADQLMG---QIVPLSLQMYGCRVIQKALDVIEPDQRVRLA-RELDGQV 639
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ C+++ + ++L ++ GC V+Q +E
Sbjct: 640 MRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDH 699
Query: 328 RERLVAE-IIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ R + E I+ + +L++D YGNYV QH+L + + R+L GH V S +K+ SN
Sbjct: 700 QCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASN 759
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVS-----MLLMHPFGNYVIQSAL----------L 431
V+E+C LE G +II+ + P+ S M++ +GNYV+Q L
Sbjct: 760 VIEKC-LEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRLTL 818
Query: 432 VSKVRLFSS 440
S+VR+ +S
Sbjct: 819 FSRVRMHAS 827
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 123/254 (48%), Gaps = 9/254 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G IV L+ YGCR +Q+ + + ++ + E+ +V + D GN+V+QK +E
Sbjct: 599 LMGQIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDGQVMRCVRDQNGNHVIQKCIEN 658
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ ++ ML Q+ + ++ +G R + +LLE ++ Q + + L
Sbjct: 659 IPAD---KVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILESVCVL 715
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+KD G+YV Q+ ++ + E+ + + +++ + ++ K V++ C+EY +R+
Sbjct: 716 SKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASNVIEKCLEYGGRVERDL 775
Query: 331 LVAEIIA------NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
++ EI + L++ +D YGNYVVQ + +L ++ H + YG
Sbjct: 776 IIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRLTLFSRVRMHASALKKYTYG 835
Query: 385 SNVVERCLLESGEE 398
++V R S EE
Sbjct: 836 KHIVSRLEQPSIEE 849
>gi|119173521|ref|XP_001239193.1| hypothetical protein CIMG_10215 [Coccidioides immitis RS]
Length = 829
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 151/293 (51%), Gaps = 11/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ +IV + DQ+G R +Q+ + + +E E +F E+ +LM+D FGNYV+QKL
Sbjct: 434 LKDIYNHIVEFSGDQHGSRFIQQKLETANSDEKERVFQEIKPNAIQLMMDVFGNYVIQKL 493
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + ++ + +G R V K LE++ QQ ++V L
Sbjct: 494 FEHGNQAQKKALAQQMMG---HILNLSTQMYGCRVVQKALEHVLLDQQAAMV-KELENQV 549
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ ++ ++++N+ + A GC V+Q +E+ A
Sbjct: 550 IKCVKDQNGNHVIQKAIERVPQAHIQFIINDFSGQIQRWAVHSYGCRVIQRMLEHCNEAD 609
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R+ ++ E+ + L D +GNYV+QH++ + + ++ + V FS +K+ SNV
Sbjct: 610 RDAILGELHLCSASLIPDQFGNYVIQHVIENGRERDRSQMIAVVISQLVLFSKHKFASNV 669
Query: 388 VERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSALLVSK 434
VE+ LE G I+ + +PN + L+ FGNYVIQ L V K
Sbjct: 670 VEKT-LEFGRPNDRSEILRIFTTPNERGESPLEGLMKDQFGNYVIQKVLQVLK 721
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ +Y L ++ ++ + D+ G +Q +E + ++ER+ EI NA+ L D +GNY
Sbjct: 429 NKRYELKDIYNHIVEFSGDQHGSRFIQQKLETANSDEKERVFQEIKPNAIQLMMDVFGNY 488
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
V+Q L +L +Q+ GH ++ S YG VV++ L +Q ++ EL
Sbjct: 489 VIQKLFEHGNQAQKKALAQQMMGHILNLSTQMYGCRVVQKALEHVLLDQQAAMVKELEN- 547
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
V + GN+VIQ A+
Sbjct: 548 -QVIKCVKDQNGNHVIQKAI 566
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 24/187 (12%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ D G I A YGCR +QR + + + + I E+ L+ D FGNYV+Q +
Sbjct: 578 INDFSGQIQRWAVHSYGCRVIQRMLEHCNEADRDAILGELHLCSASLIPDQFGNYVIQHV 637
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL---- 263
+E E R++++ ++ + QLV + V K LE P S +L
Sbjct: 638 IENGRERDRSQMIAVVIS---QLVLFSKHKFASNVVEKTLE-FGRPNDRSEILRIFTTPN 693
Query: 264 ---RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCV 320
L KD G+YVIQ ++ ++ + L++++ +L H
Sbjct: 694 ERGESPLEGLMKDQFGNYVIQKVLQVLKGDEYQTLVDKI-------------VPLLSHLK 740
Query: 321 EYSKGAQ 327
++S G Q
Sbjct: 741 KHSHGKQ 747
>gi|297282793|ref|XP_001096525.2| PREDICTED: pumilio homolog 1 isoform 3 [Macaca mulatta]
gi|332808250|ref|XP_001157224.2| PREDICTED: pumilio homolog 1 isoform 4 [Pan troglodytes]
gi|397515863|ref|XP_003828161.1| PREDICTED: pumilio homolog 1 isoform 2 [Pan paniscus]
gi|402853681|ref|XP_003891519.1| PREDICTED: pumilio homolog 1 isoform 2 [Papio anubis]
Length = 1044
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 702 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 761
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 762 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 818
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 819 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 878
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 879 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 938
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 939 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 991
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 755 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE 814
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 815 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 869
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 870 RILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 928
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 929 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 988
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 989 VAEPGQRKIVMHKIRPHIATLRKYTYGKHILAK 1021
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 687 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 746
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 747 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 805
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 806 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 863
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 864 GCRVIQRIL 872
>gi|227430388|ref|NP_001153078.1| pumilio homolog 1 isoform 5 [Mus musculus]
Length = 944
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 157/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 604 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 663
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 664 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMV-RELDGHV 719
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 720 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 779
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 780 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 839
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLMHP--FGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 840 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 891
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 127/249 (51%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG++++LA YGCR +Q+ + +P ++ + E+ V + + D GN+VVQK +E
Sbjct: 679 IRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIE- 737
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 738 CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQHTE 792
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++ +R
Sbjct: 793 QLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTER 852
Query: 329 ERLVAEIIA------NALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ +AL + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 853 AVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKY 912
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 913 TYGKHILAK 921
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 589 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAY 648
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 649 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 708
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 709 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 766
Query: 425 VIQSAL 430
VIQ L
Sbjct: 767 VIQRIL 772
>gi|299883578|emb|CBD70070.1| pumilio-related protein [Pelophylax lessonae]
Length = 1204
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 158/293 (53%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 862 LREIAGHIIEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 921
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + QQ I+ ++ L
Sbjct: 922 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINDMVRELDGH 978
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 979 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRVIQRILEHCLPE 1038
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1039 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1098
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1099 VVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1151
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 136/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 915 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINDMVRE 974
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 975 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKSQVFALSTHPYGCRVIQ 1029
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P+Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 1030 RILEHCL-PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1088
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 1089 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1148
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1149 VAEPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1181
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 4/188 (2%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 847 RLLEDFRNNRYPNLQLREIAGHIIEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 906
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--Q 362
+ D G V+Q E+ Q+ L I + L LA YG V+Q L P Q
Sbjct: 907 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQ 966
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFG 422
+ ++R+L+GH + ++ G++VV++C +E + QS + II+ +S V L HP+G
Sbjct: 967 VINDMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKS-QVFALSTHPYG 1024
Query: 423 NYVIQSAL 430
VIQ L
Sbjct: 1025 CRVIQRIL 1032
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+ + AL+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 1011 FKSQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1070
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L+L+ F +V C+ TH R
Sbjct: 1071 GRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAMLIDEVCTMNDGPHSA 1129
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1130 LYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYY 1186
>gi|291399425|ref|XP_002716109.1| PREDICTED: pumilio 1-like isoform 2 [Oryctolagus cuniculus]
Length = 1092
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 158/293 (53%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 750 LREIAGHIMEFSQDQHGSRFIQLKLERATTAERQLVFNEILQAAYQLMVDVFGNYVIQKF 809
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + QQ I+ ++ L
Sbjct: 810 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPADQQVINEMVRELDGH 866
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 867 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 926
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 927 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 986
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 987 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1039
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 735 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATTAERQLVFNEILQAAY 794
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 795 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPADQ 853
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 854 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 911
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 912 GCRVIQRIL 920
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 53/252 (21%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+RG++++LA YGCR +Q+ + +P ++ I + E+ V + + D GN+VVQK +
Sbjct: 825 IRGHVLSLALQMYGCRVIQKALEFIPADQQVINEMVRELDGHVLKCVKDQNGNHVVQKCI 884
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 885 E-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQH 938
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++
Sbjct: 939 TEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRT 998
Query: 327 QRERLVAEI------------------IANALL-------------------------LA 343
+R L+ E+ AN ++ L
Sbjct: 999 ERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLR 1058
Query: 344 EDCYGNYVVQHL 355
+ YG +++ L
Sbjct: 1059 KYTYGKHILAKL 1070
>gi|255080292|ref|XP_002503726.1| predicted protein [Micromonas sp. RCC299]
gi|226518993|gb|ACO64984.1| predicted protein [Micromonas sp. RCC299]
Length = 806
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 156/290 (53%), Gaps = 9/290 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L DL ++V + DQ+G R +Q+ + + EE +F EV+ +L+ D FGNYVVQK
Sbjct: 435 LPDLADHVVEFSSDQHGSRFIQQKLETAEPEEAAAVFAEVLPSAHQLITDVFGNYVVQKF 494
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E ++EQR R+L D ++ + L +G R + K LE QQ ++V L
Sbjct: 495 LEYGTDEQR-RLLAGELKD--HVLSLSLQMYGCRVIQKALEVFDEAQQTAMV-NELDGHV 550
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ C++ +++++ N ++T GC V+Q +E+ Q
Sbjct: 551 LRCVRDQNGNHVIQKCIERVPPARIQFIVSSFYGNVLSLSTHPYGCRVIQRVLEHCTPEQ 610
Query: 328 R-ERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ E ++ EI+ A+ LA+D YGNYVVQH+L +L L G V + +K+ SN
Sbjct: 611 KTEGIMDEILREAVQLAQDQYGNYVVQHVLQHGGEDERRKILATLAGQIVILAQHKFASN 670
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSALLV 432
V+E+CL G E+ +I E+L + + + ++ F NYV+Q L V
Sbjct: 671 VIEKCLTYCGAEERQIMITEMLGTTDENEPLQAMMKDQFANYVVQKLLEV 720
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 123/248 (49%), Gaps = 9/248 (3%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
+L+ ++++L+ YGCR +Q+ + + + + E+ V + D GN+V+QK +E
Sbjct: 509 ELKDHVLSLSLQMYGCRVIQKALEVFDEAQQTAMVNELDGHVLRCVRDQNGNHVIQKCIE 568
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
RI ++++ ++ + + +G R + ++LE+ T Q+ ++ + AV
Sbjct: 569 RVPP---ARIQFIVSSFYGNVLSLSTHPYGCRVIQRVLEHCTPEQKTEGIMDEILREAVQ 625
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
L +D G+YV+Q+ ++H ++ + +L +A +A K V++ C+ Y +R+
Sbjct: 626 LAQDQYGNYVVQHVLQHGGEDERRKILATLAGQIVILAQHKFASNVIEKCLTYCGAEERQ 685
Query: 330 RLVAEIIANA------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
++ E++ + +D + NYVVQ LL + LL +++ H + Y
Sbjct: 686 IMITEMLGTTDENEPLQAMMKDQFANYVVQKLLEVCDEGEREQLLSRMQVHLPNLKKFTY 745
Query: 384 GSNVVERC 391
G ++V R
Sbjct: 746 GKHIVARV 753
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
L L G IV LA+ ++ +++ ++ EE +++ E++ E +M D F N
Sbjct: 652 LATLAGQIVILAQHKFASNVIEKCLTYCGAEERQIMITEMLGTTDENEPLQAMMKDQFAN 711
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLE-NLTNPQQISLV 259
YVVQKL+E+C E +R ++L + L + H + V KL++ NL P+ I+ V
Sbjct: 712 YVVQKLLEVCDEGEREQLLSRMQVHLPNLKKFTYGKHIVARVEKLIQSNLPPPKPITAV 770
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 8/188 (4%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE N + L L V + D +G IQ ++ E+ + EV + +
Sbjct: 421 LLEGFKNNKSRRFELPDLADHVVEFSSDQHGSRFIQQKLETAEPEEAAAVFAEVLPSAHQ 480
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q +EY QR L E+ + L L+ YG V+Q L +
Sbjct: 481 LITDVFGNYVVQKFLEYGTDEQRRLLAGELKDHVLSLSLQMYGCRVIQKALEVFDEAQQT 540
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSP---NVSMLLMHPFG 422
+++ +L+GH + ++ G++V+++C+ E+ I+ + S NV L HP+G
Sbjct: 541 AMVNELDGHVLRCVRDQNGNHVIQKCI-----ERVPPARIQFIVSSFYGNVLSLSTHPYG 595
Query: 423 NYVIQSAL 430
VIQ L
Sbjct: 596 CRVIQRVL 603
>gi|354472359|ref|XP_003498407.1| PREDICTED: pumilio homolog 1 isoform 1 [Cricetulus griseus]
Length = 1185
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 157/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 845 LREIVGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 904
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 905 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMV-RELDGHV 960
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 961 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 1020
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 1021 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1080
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1081 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1132
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 127/249 (51%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG++++LA YGCR +Q+ + +P ++ + E+ V + + D GN+VVQK +E
Sbjct: 920 IRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIE- 978
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 979 CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQHTE 1033
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++ +R
Sbjct: 1034 QLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTER 1093
Query: 329 ERLVAEIIA------NALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ +AL + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 1094 AVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKY 1153
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1154 TYGKHILAK 1162
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 830 RLLEDFRNNRYPNLQLREIVGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAY 889
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 890 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 949
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 950 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 1007
Query: 425 VIQSAL 430
VIQ L
Sbjct: 1008 VIQRIL 1013
>gi|194390836|dbj|BAG62177.1| unnamed protein product [Homo sapiens]
Length = 1044
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 702 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 761
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 762 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 818
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 819 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 878
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 879 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 938
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 939 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 991
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 755 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE 814
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 815 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 869
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 870 RILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 928
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 929 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 988
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 989 VAEPGQRKIVMHKIRPHIATLRKYTYGKHILAK 1021
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 687 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 746
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 747 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 805
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 806 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 863
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 864 GCRVIQRIL 872
>gi|440896924|gb|ELR48715.1| Pumilio-like protein 1, partial [Bos grunniens mutus]
Length = 1192
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 850 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 909
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 910 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 966
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 967 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1026
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1027 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1086
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1087 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1139
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 903 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE 962
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 963 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 1017
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 1018 RILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1076
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 1077 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1136
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1137 VAEPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1169
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 835 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 894
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 895 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 953
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 954 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 1011
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 1012 GCRVIQRIL 1020
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + AL+ YGCR +QR + ++ I E+ +L+ D +GNYV+Q ++E
Sbjct: 999 FKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1058
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L+L+ F +V C+ TH R
Sbjct: 1059 GRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAVLIDEVCTMNDGPHSA 1117
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1118 LYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYY 1174
>gi|410910802|ref|XP_003968879.1| PREDICTED: pumilio homolog 1-like [Takifugu rubripes]
Length = 1162
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 156/293 (53%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRD+ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 820 LRDIAGHIMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKF 879
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S +Q+ L + ++ + L +G R + K LE + + QQ IS ++ L
Sbjct: 880 FEFGSLDQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGH 936
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ ++++ + ++T GC V+Q +E+
Sbjct: 937 VLKCVKDQNGNHVVQKCIECVQPHALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPE 996
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L + + ++ ++ G+ + S +K+ SN
Sbjct: 997 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASN 1056
Query: 387 VVERCLLESGEEQSTRIIIE---LLRSPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E L P+ ++ M + NYV+Q + V++
Sbjct: 1057 VVEKCVTHASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMIDVAE 1109
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 137/273 (50%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 873 NYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRE 932
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + ++ D F+ L+TH G R +
Sbjct: 933 LDGHVLKCVKDQNGNHVVQKCIE-CVQPHALHFII----DAFKGQVFALSTHPYGCRVIQ 987
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P+Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 988 RILEHCL-PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVL 1046
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
G++ K V++ CV ++ A+R L+ E+ + +AL + +D Y NYVVQ ++
Sbjct: 1047 GLSQHKFASNVVEKCVTHASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMID 1106
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1107 VAEPTQRKIVMHKIRPHISTLRKYTYGKHILAK 1139
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ S + + + +E+ Y
Sbjct: 805 RLLEDFRNNRYPNLQLRDIAGHIMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAY 864
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 865 QLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 923
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ + ++R+L+GH + ++ G++VV++C +E + + II+ + V L HP+
Sbjct: 924 QVISEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPHALHFIIDAFKG-QVFALSTHPY 981
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 982 GCRVIQRIL 990
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + AL+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 969 FKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1028
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH RA
Sbjct: 1029 GRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCV-THASRAERAVLIDEVCSLTEGPHSA 1087
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1088 LYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHISTLRKYTYGKHILAKLEKYY 1144
>gi|403415667|emb|CCM02367.1| predicted protein [Fibroporia radiculosa]
Length = 845
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 161/306 (52%), Gaps = 23/306 (7%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR-VCELMIDPFGNYVVQK 206
L+D+ G IV + DQ+G R +Q+ + + +E ++IF E++ V +L+ D FGNYV+QK
Sbjct: 492 LKDIYGYIVEFSGDQHGSRFIQQKLETATADERQVIFDEIVPHNVLQLIQDVFGNYVIQK 551
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L E ++ Q+T ++ + ++ + L +G R V K +E++ P+Q S + L
Sbjct: 552 LFEHGTQVQKT---ILANAMESHVLPLSLQMYGCRVVQKAVEHVL-PEQQSNFVKELDAS 607
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++VIQ ++ E ++ N Y +AT GC VLQ C E+
Sbjct: 608 VLRCVKDANGNHVIQKLIERVPPERLMFI-KAFKGNVYDLATHPYGCRVLQRCFEHLPDE 666
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
L+ E+ + L +D +GNYVVQ +L Q A ++ +L G + + +K+ SN
Sbjct: 667 YTRPLLDELHKHVTHLMQDQFGNYVVQFVLEHGKAQDRAVVITKLRGQMLHMARHKFASN 726
Query: 387 VVERCLLESGEEQSTRIIIELLR------SPNVSMLLMHPFGNYVIQSAL---------- 430
VVE+ L+ + E +I E++ SP ++M+ F NYV+Q AL
Sbjct: 727 VVEKALITADLENRRALIDEIMAGKPDGISPILTMMKDQ-FANYVLQRALSVVEGEQREA 785
Query: 431 LVSKVR 436
LVSKVR
Sbjct: 786 LVSKVR 791
>gi|403293274|ref|XP_003937645.1| PREDICTED: pumilio homolog 1 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 1224
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 882 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 941
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 942 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 998
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 999 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1058
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1059 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1118
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1119 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1171
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 935 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE 994
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 995 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 1049
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 1050 RILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1108
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 1109 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1168
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1169 VAEPGQRKIVMHKIRPHIATLRKYTYGKHILAK 1201
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 867 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 926
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 927 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 985
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 986 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 1043
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 1044 GCRVIQRIL 1052
>gi|426221805|ref|XP_004005097.1| PREDICTED: pumilio homolog 1 isoform 2 [Ovis aries]
Length = 1038
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 696 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 755
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 756 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 812
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 813 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 872
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 873 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 932
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 933 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 985
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 749 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE 808
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 809 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 863
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 864 RILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 922
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 923 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 982
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 983 VAEPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1015
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 681 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 740
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 741 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 799
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 800 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 857
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 858 GCRVIQRIL 866
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + AL+ YGCR +QR + ++ I E+ +L+
Sbjct: 839 QFIIDAF--------KGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ 890
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L+L+ F +V C+ TH R
Sbjct: 891 DQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAVL 949
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +V+ +RP TL K T G
Sbjct: 950 IDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYG 1009
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 1010 KHILAKLEKYY 1020
>gi|354472363|ref|XP_003498409.1| PREDICTED: pumilio homolog 1 isoform 3 [Cricetulus griseus]
Length = 943
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 157/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 603 LREIVGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 662
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 663 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMV-RELDGHV 718
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 719 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 778
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 779 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 838
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLMHP--FGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 839 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 890
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 127/249 (51%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG++++LA YGCR +Q+ + +P ++ + E+ V + + D GN+VVQK +E
Sbjct: 678 IRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIE- 736
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 737 CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQHTE 791
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++ +R
Sbjct: 792 QLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTER 851
Query: 329 ERLVAEIIA------NALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ +AL + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 852 AVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKY 911
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 912 TYGKHILAK 920
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 588 RLLEDFRNNRYPNLQLREIVGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAY 647
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 648 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 707
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 708 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 765
Query: 425 VIQSAL 430
VIQ L
Sbjct: 766 VIQRIL 771
>gi|119467660|ref|XP_001257636.1| mRNA binding protein Pumilio 2, putative [Neosartorya fischeri NRRL
181]
gi|119405788|gb|EAW15739.1| mRNA binding protein Pumilio 2, putative [Neosartorya fischeri NRRL
181]
Length = 908
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 151/289 (52%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ +IV + DQ+G R +Q+ + + +E E +F E+ +LM D FGNYVVQKL
Sbjct: 489 LKDIYNHIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKL 548
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ ++ ++ + +G R V K LE++ QQ S+V L
Sbjct: 549 FEHGNQSQKK---ILANQMKGHVLALSTQMYGCRVVQKALEHILTDQQASMV-KELENHV 604
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ ++ + ++++N +A GC V+Q +E+ +
Sbjct: 605 LKCVRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVSRLAAHPYGCRVIQRMLEHCEEVD 664
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
RE ++AE+ A L D +GNYV+QH++ + + ++ + + +S +K+ SNV
Sbjct: 665 RESILAELHACTAHLIPDQFGNYVIQHVIENGEEKDRSRMINVVLSQLLMYSKHKFASNV 724
Query: 388 VERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSAL 430
VE+ +E GEE R II L S N + L+ +GNYVIQ L
Sbjct: 725 VEKS-IEFGEESQRRQIISTLTSANERGESPLLGLMRDQYGNYVIQKVL 772
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 125/254 (49%), Gaps = 13/254 (5%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+++AL+ YGCR +Q+ + + ++ + E+ + V + + D GN+V+QK +E
Sbjct: 564 MKGHVLALSTQMYGCRVVQKALEHILTDQQASMVKELENHVLKCVRDQNGNHVIQKAIER 623
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ + ++ Q+ R+ + +G R + ++LE+ + S +LA L L
Sbjct: 624 VPSQ---YVQFIINAFKGQVSRLAAHPYGCRVIQRMLEHCEEVDRES-ILAELHACTAHL 679
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
D G+YVIQ+ +++ +D ++N V + K V++ +E+ + +QR +
Sbjct: 680 IPDQFGNYVIQHVIENGEEKDRSRMINVVLSQLLMYSKHKFASNVVEKSIEFGEESQRRQ 739
Query: 331 LVAEII-ANA------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+++ + AN L L D YGNYV+Q +L + +L+ Q+ Y
Sbjct: 740 IISTLTSANERGESPLLGLMRDQYGNYVIQKVLGQLKGEEREALIDQIRPLLSQLKKFSY 799
Query: 384 GSNVV--ERCLLES 395
G +V E+ + +S
Sbjct: 800 GKQIVAIEKLIFDS 813
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S + +Y L ++ ++ + D+ G +Q +E + ++E++ EI N L L D +
Sbjct: 481 SKGNKRYELKDIYNHIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVF 540
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYVVQ L L Q++GH ++ S YG VV++ L +Q ++ EL
Sbjct: 541 GNYVVQKLFEHGNQSQKKILANQMKGHVLALSTQMYGCRVVQKALEHILTDQQASMVKEL 600
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 601 EN--HVLKCVRDQNGNHVIQKAI 621
>gi|281353340|gb|EFB28924.1| hypothetical protein PANDA_013254 [Ailuropoda melanoleuca]
Length = 1193
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 851 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 910
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 911 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 967
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 968 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1027
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1028 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1087
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1088 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1140
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 904 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE 963
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 964 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 1018
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 1019 RILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1077
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 1078 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1137
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1138 VAEPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1170
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 836 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 895
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 896 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 954
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 955 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 1012
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 1013 GCRVIQRIL 1021
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + AL+ YGCR +QR + ++ I E+ +L+ D +GNYV+Q ++E
Sbjct: 1000 FKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1059
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L+L+ F +V C+ TH R
Sbjct: 1060 GRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAVLIDEVCTMNDGPHSA 1118
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1119 LYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYY 1175
>gi|62896769|dbj|BAD96325.1| pumilio homolog 1 variant [Homo sapiens]
Length = 1188
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 906 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 962
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 963 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1022
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1023 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1082
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1083 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1135
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 899 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE 958
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 959 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 1013
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 1014 RILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1072
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 1073 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1132
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1133 VAEPGQRKIVMHKIRPHIATLRKYTYGKHILAK 1165
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 831 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 890
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 891 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 949
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 950 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 1007
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 1008 GCRVIQRIL 1016
>gi|410966648|ref|XP_003989842.1| PREDICTED: pumilio homolog 1 isoform 2 [Felis catus]
Length = 1224
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 882 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 941
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 942 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 998
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 999 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1058
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1059 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1118
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1119 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1171
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 935 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE 994
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 995 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 1049
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 1050 RILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1108
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 1109 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1168
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1169 VAEPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1201
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 867 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 926
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 927 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 985
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 986 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 1043
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 1044 GCRVIQRIL 1052
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + AL+ YGCR +QR + ++ I E+ +L+ D +GNYV+Q ++E
Sbjct: 1031 FKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1090
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L+L+ F +V C+ TH R
Sbjct: 1091 GRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAVLIDEVCTMNDGPHSA 1149
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1150 LYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYY 1206
>gi|109000894|ref|XP_001096958.1| PREDICTED: pumilio homolog 1 isoform 6 [Macaca mulatta]
Length = 1162
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 820 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 879
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 880 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 936
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 937 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 996
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 997 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1056
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1057 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1109
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 873 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE 932
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 933 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 987
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 988 RILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1046
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 1047 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1106
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1107 VAEPGQRKIVMHKIRPHIATLRKYTYGKHILAK 1139
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 805 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 864
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 865 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 923
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 924 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 981
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 982 GCRVIQRIL 990
>gi|73950042|ref|XP_852168.1| PREDICTED: pumilio homolog 1 isoform 2 [Canis lupus familiaris]
Length = 1224
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 882 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 941
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 942 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 998
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 999 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1058
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1059 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1118
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1119 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1171
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 935 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE 994
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 995 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 1049
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 1050 RILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1108
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 1109 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1168
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1169 VAEPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1201
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 867 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 926
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 927 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 985
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 986 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 1043
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 1044 GCRVIQRIL 1052
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + AL+ YGCR +QR + ++ I E+ +L+ D +GNYV+Q ++E
Sbjct: 1031 FKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1090
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L+L+ F +V C+ TH R
Sbjct: 1091 GRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAVLIDEVCTMNDGPHSA 1149
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1150 LYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYY 1206
>gi|66932909|ref|NP_001018494.1| pumilio homolog 1 isoform 1 [Homo sapiens]
gi|380784595|gb|AFE64173.1| pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|383410799|gb|AFH28613.1| pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|384943764|gb|AFI35487.1| pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|410225218|gb|JAA09828.1| pumilio homolog 1 [Pan troglodytes]
gi|410266290|gb|JAA21111.1| pumilio homolog 1 [Pan troglodytes]
gi|410304038|gb|JAA30619.1| pumilio homolog 1 [Pan troglodytes]
gi|410350697|gb|JAA41952.1| pumilio homolog 1 [Pan troglodytes]
Length = 1188
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 906 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 962
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 963 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1022
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1023 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1082
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1083 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1135
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 899 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE 958
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 959 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 1013
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 1014 RILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1072
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 1073 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1132
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1133 VAEPGQRKIVMHKIRPHIATLRKYTYGKHILAK 1165
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 831 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 890
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 891 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 949
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 950 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 1007
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 1008 GCRVIQRIL 1016
>gi|119628036|gb|EAX07631.1| pumilio homolog 1 (Drosophila), isoform CRA_b [Homo sapiens]
Length = 1189
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 847 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 906
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 907 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 963
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 964 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1023
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1024 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1083
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1084 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1136
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 900 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE 959
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 960 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 1014
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 1015 RILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1073
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 1074 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1133
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1134 VAEPGQRKIVMHKIRPHIATLRKYTYGKHILAK 1166
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 832 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 891
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 892 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 950
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 951 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 1008
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 1009 GCRVIQRIL 1017
>gi|291399423|ref|XP_002716108.1| PREDICTED: pumilio 1-like isoform 1 [Oryctolagus cuniculus]
Length = 1186
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 156/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATTAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + QQ +V L
Sbjct: 906 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPADQQNEMVRE-LDGHV 961
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 962 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 1021
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 1022 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1081
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1082 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1133
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 127/249 (51%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG++++LA YGCR +Q+ + +P ++ + E+ V + + D GN+VVQK +E
Sbjct: 921 IRGHVLSLALQMYGCRVIQKALEFIPADQQNEMVRELDGHVLKCVKDQNGNHVVQKCIE- 979
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 980 CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQHTE 1034
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++ +R
Sbjct: 1035 QLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTER 1094
Query: 329 ERLVAEIIA------NALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ +AL + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 1095 AVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKY 1154
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1155 TYGKHILAK 1163
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 831 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATTAERQLVFNEILQAAY 890
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 891 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPADQQ 950
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 951 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 1008
Query: 425 VIQSAL 430
VIQ L
Sbjct: 1009 VIQRIL 1014
>gi|387017906|gb|AFJ51071.1| Pumilio homolog 1-like [Crotalus adamanteus]
Length = 1185
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 158/293 (53%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 843 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 902
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ + + ++ + L +G R + K LE + QQ I+ ++ L
Sbjct: 903 FEFGSLEQKLALAERIRG---HVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGH 959
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 960 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPE 1019
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1020 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1079
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1080 VVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1132
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 136/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 896 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRE 955
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 956 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 1010
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P+Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 1011 RILEHCL-PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1069
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 1070 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1129
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1130 VAEPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1162
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 4/188 (2%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 828 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 887
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--Q 362
+ D G V+Q E+ Q+ L I + L LA YG V+Q L P Q
Sbjct: 888 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQ 947
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFG 422
+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 948 VINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYG 1005
Query: 423 NYVIQSAL 430
VIQ L
Sbjct: 1006 CRVIQRIL 1013
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + AL+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 992 FKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1051
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L+L+ F +V C+ TH R
Sbjct: 1052 GRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAMLIDEVCTMNDGPHSA 1110
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1111 LYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYY 1167
>gi|119628035|gb|EAX07630.1| pumilio homolog 1 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 1193
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 851 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 910
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 911 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 967
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 968 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1027
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1028 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1087
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1088 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1140
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 904 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE 963
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 964 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 1018
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 1019 RILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1077
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 1078 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1137
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1138 VAEPGQRKIVMHKIRPHIATLRKYTYGKHILAK 1170
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 836 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 895
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 896 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 954
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 955 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 1012
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 1013 GCRVIQRIL 1021
>gi|119628037|gb|EAX07632.1| pumilio homolog 1 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 1224
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 882 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 941
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 942 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 998
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 999 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1058
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1059 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1118
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1119 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1171
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 935 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE 994
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 995 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 1049
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 1050 RILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1108
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 1109 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1168
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1169 VAEPGQRKIVMHKIRPHIATLRKYTYGKHILAK 1201
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 867 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 926
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 927 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 985
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 986 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 1043
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 1044 GCRVIQRIL 1052
>gi|355745080|gb|EHH49705.1| hypothetical protein EGM_00414 [Macaca fascicularis]
Length = 1224
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 882 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 941
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 942 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 998
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 999 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1058
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1059 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1118
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1119 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1171
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 935 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE 994
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 995 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 1049
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 1050 RILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1108
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 1109 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1168
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1169 VAEPGQRKIVMHKIRPHIATLRKYTYGKHILAK 1201
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 867 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 926
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 927 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 985
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 986 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 1043
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 1044 GCRVIQRIL 1052
>gi|109000868|ref|XP_001096289.1| PREDICTED: pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|114555200|ref|XP_001157067.1| PREDICTED: pumilio homolog 1 isoform 2 [Pan troglodytes]
gi|397515865|ref|XP_003828162.1| PREDICTED: pumilio homolog 1 isoform 3 [Pan paniscus]
gi|355557757|gb|EHH14537.1| hypothetical protein EGK_00481 [Macaca mulatta]
Length = 1224
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 882 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 941
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 942 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 998
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 999 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1058
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1059 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1118
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1119 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1171
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 935 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE 994
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 995 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 1049
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 1050 RILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1108
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 1109 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1168
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1169 VAEPGQRKIVMHKIRPHIATLRKYTYGKHILAK 1201
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 867 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 926
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 927 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 985
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 986 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 1043
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 1044 GCRVIQRIL 1052
>gi|255729316|ref|XP_002549583.1| hypothetical protein CTRG_03880 [Candida tropicalis MYA-3404]
gi|240132652|gb|EER32209.1| hypothetical protein CTRG_03880 [Candida tropicalis MYA-3404]
Length = 883
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 153/298 (51%), Gaps = 24/298 (8%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
SL+D+ G+ V KDQ+G R +Q+ + EE + IF E+ + +LM D FGNYV+QK
Sbjct: 545 SLKDIYGHAVEFTKDQHGSRFIQQKLPEASDEEKQTIFNEIWEISYDLMTDVFGNYVIQK 604
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E + Q+ +L + + + L +G R V + LE + Q+ ++ L+
Sbjct: 605 YFEHGNSTQKQVLLESMIG---HIHELSLQMYGCRVVQRALEAIETEGQLRII-EELKDH 660
Query: 267 AVTLTKDTNGHYVIQYCV---KHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
+ KD NG++VIQ + K FS +++L + Y ++T GC V+Q +E+S
Sbjct: 661 ILVCCKDQNGNHVIQKSIEKIKPFSK--IRFILTSLDTQIYHLSTHPYGCRVIQRLLEFS 718
Query: 324 KGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
++ ++ ++ L D YGNYV+QH+L P+ +L + G V FS +K+
Sbjct: 719 DEDDQKMILTQLNNFLYYLILDQYGNYVIQHILENGTPEEKEPILEIVLGSVVQFSKHKF 778
Query: 384 GSNVVERCLLESGEEQSTRIIIELL--------------RSPNVSMLLMHPFGNYVIQ 427
SNV+E+C+ Q RI+ E++ SP +++++ FGNYVIQ
Sbjct: 779 ASNVIEKCIKFGDLNQRKRILHEVMLGNEDINDDSEIGDDSP-LALMVKDQFGNYVIQ 835
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 112/224 (50%), Gaps = 18/224 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L + G+I L+ YGCR +QR + ++ E I E+ D + D GN+V+QK
Sbjct: 618 LESMIGHIHELSLQMYGCRVVQRALEAIETEGQLRIIEELKDHILVCCKDQNGNHVIQKS 677
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E + ++I +LT+ D Q+ + + +G R + +LLE ++ ++L L
Sbjct: 678 IEKI--KPFSKIRFILTSLDTQIYHLSTHPYGCRVIQRLLE-FSDEDDQKMILTQLNNFL 734
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
L D G+YVIQ+ +++ + E+ + +L V + + K V++ C+++ Q
Sbjct: 735 YYLILDQYGNYVIQHILENGTPEEKEPILEIVLGSVVQFSKHKFASNVIEKCIKFGDLNQ 794
Query: 328 RERLVAEII---------------ANALLLAEDCYGNYVVQHLL 356
R+R++ E++ + L+ +D +GNYV+Q L+
Sbjct: 795 RKRILHEVMLGNEDINDDSEIGDDSPLALMVKDQFGNYVIQKLV 838
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 96/201 (47%), Gaps = 4/201 (1%)
Query: 231 VRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHE 290
V + HG R + + L ++ ++ + + + L D G+YVIQ +H +
Sbjct: 554 VEFTKDQHGSRFIQQKLPEASDEEK-QTIFNEIWEISYDLMTDVFGNYVIQKYFEHGNST 612
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ LL + + + ++ GC V+Q +E + + R++ E+ + L+ +D GN+
Sbjct: 613 QKQVLLESMIGHIHELSLQMYGCRVVQRALEAIETEGQLRIIEELKDHILVCCKDQNGNH 672
Query: 351 VVQHLLALRVP-QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLR 409
V+Q + P +L L+ S + YG V++R LLE +E ++I+ L
Sbjct: 673 VIQKSIEKIKPFSKIRFILTSLDTQIYHLSTHPYGCRVIQR-LLEFSDEDDQKMILTQLN 731
Query: 410 SPNVSMLLMHPFGNYVIQSAL 430
+ + L++ +GNYVIQ L
Sbjct: 732 N-FLYYLILDQYGNYVIQHIL 751
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 4/146 (2%)
Query: 294 YLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQ 353
+ L ++ + D+ G +Q + + +++ + EI + L D +GNYV+Q
Sbjct: 544 FSLKDIYGHAVEFTKDQHGSRFIQQKLPEASDEEKQTIFNEIWEISYDLMTDVFGNYVIQ 603
Query: 354 HLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNV 413
LL + GH S YG VV+R L E RII EL ++
Sbjct: 604 KYFEHGNSTQKQVLLESMIGHIHELSLQMYGCRVVQRALEAIETEGQLRIIEEL--KDHI 661
Query: 414 SMLLMHPFGNYVIQSALLVSKVRLFS 439
+ GN+VIQ + + K++ FS
Sbjct: 662 LVCCKDQNGNHVIQKS--IEKIKPFS 685
>gi|193788405|dbj|BAG53299.1| unnamed protein product [Homo sapiens]
Length = 925
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 583 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 642
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 643 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 699
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q CV+ + +++++ + ++T GC V+Q +E+
Sbjct: 700 VLKCVKDQNGNHVVQKCVECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 759
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 760 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 819
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLMHP--FGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 820 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 872
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 636 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE 695
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK VE C + Q + ++ D F+ L+TH G R +
Sbjct: 696 LDGHVLKCVKDQNGNHVVQKCVE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 750
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 751 RILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 809
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 810 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 869
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 870 VAEPGQRKIVMHKIRPHIATLRKYTYGKHILAK 902
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 568 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 627
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 628 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 686
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 687 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-VECVQPQSLQFIIDAFKG-QVFALSTHPY 744
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 745 GCRVIQRIL 753
>gi|351699059|gb|EHB01978.1| Pumilio-like protein 1 [Heterocephalus glaber]
Length = 1091
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 749 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 808
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 809 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 865
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 866 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCLPD 925
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 926 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 985
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 986 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1038
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 128/251 (50%), Gaps = 17/251 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+RG++++LA YGCR +Q+ + +P ++ I + E+ V + + D GN+VVQK +
Sbjct: 824 IRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCI 883
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 884 E-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCL-PDQTLPILEELHQH 937
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++
Sbjct: 938 TEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRT 997
Query: 327 QRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFS 379
+R L+ E+ +AL + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 998 ERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLR 1057
Query: 380 CNKYGSNVVER 390
YG +++ +
Sbjct: 1058 KYTYGKHILAK 1068
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 95/189 (50%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 734 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAY 793
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 794 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 852
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V +L HP+
Sbjct: 853 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFVLSTHPY 910
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 911 GCRVIQRIL 919
>gi|355714560|gb|AES05044.1| pumilio-like protein 1 [Mustela putorius furo]
Length = 1208
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 867 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 926
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 927 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 983
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 984 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPE 1043
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1044 QTLPVLEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1103
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1104 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1156
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 136/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 920 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE 979
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 980 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 1034
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P+Q VL L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 1035 RILEHCL-PEQTLPVLEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1093
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 1094 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1153
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1154 VAEPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1186
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 852 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 911
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 912 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 970
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 971 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 1028
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 1029 GCRVIQRIL 1037
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + AL+ YGCR +QR + E+ + E+ +L+ D +GNYV+Q ++E
Sbjct: 1016 FKGQVFALSTHPYGCRVIQRILEHCLPEQTLPVLEELHQHTEQLVQDQYGNYVIQHVLEH 1075
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L+L+ F +V C+ TH R
Sbjct: 1076 GRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAVLIDEVCTMNDGPHSA 1134
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1135 LYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYY 1191
>gi|334329171|ref|XP_003341193.1| PREDICTED: pumilio homolog 1 isoform 2 [Monodelphis domestica]
Length = 1094
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 158/293 (53%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 752 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 811
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + QQ I+ ++ L
Sbjct: 812 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGH 868
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 869 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPE 928
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 929 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 988
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 989 VVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1041
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 136/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 805 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRE 864
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 865 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 919
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P+Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 920 RILEHCL-PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 978
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 979 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1038
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1039 VAEPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1071
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 4/188 (2%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 737 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 796
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--Q 362
+ D G V+Q E+ Q+ L I + L LA YG V+Q L P Q
Sbjct: 797 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQ 856
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFG 422
+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 857 VINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYG 914
Query: 423 NYVIQSAL 430
VIQ L
Sbjct: 915 CRVIQRIL 922
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + AL+ YGCR +QR + E+ I E+ +L+
Sbjct: 895 QFIIDAF--------KGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQ 946
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L+L+ F +V C+ TH R
Sbjct: 947 DQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAML 1005
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +V+ +RP TL K T G
Sbjct: 1006 IDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYG 1065
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 1066 KHILAKLEKYY 1076
>gi|123913364|sp|Q2VB19.1|PUM1_CHICK RecName: Full=Pumilio homolog 1
gi|82569972|gb|ABB83588.1| pumilio 1 [Gallus gallus]
Length = 1189
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 158/293 (53%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 847 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 906
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + QQ I+ ++ L
Sbjct: 907 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGH 963
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 964 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPE 1023
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1024 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1083
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1084 VVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1136
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 136/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 900 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRE 959
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 960 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 1014
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P+Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 1015 RILEHCL-PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1073
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 1074 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1133
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1134 VAEPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1166
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 4/188 (2%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 832 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 891
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--Q 362
+ D G V+Q E+ Q+ L I + L LA YG V+Q L P Q
Sbjct: 892 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQ 951
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFG 422
+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 952 VINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYG 1009
Query: 423 NYVIQSAL 430
VIQ L
Sbjct: 1010 CRVIQRIL 1017
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + AL+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 996 FKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1055
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L+L+ F +V C+ TH R
Sbjct: 1056 GRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAMLIDEVCTMNDGPHSA 1114
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1115 LYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYY 1171
>gi|197102622|ref|NP_001127595.1| pumilio homolog 1 [Pongo abelii]
gi|75041171|sp|Q5R5X3.1|PUM1_PONAB RecName: Full=Pumilio homolog 1
gi|55732279|emb|CAH92843.1| hypothetical protein [Pongo abelii]
Length = 1186
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 157/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 906 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMV-RELDGHV 961
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 962 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 1021
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 1022 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1081
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1082 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1133
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 134/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 899 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELD 958
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 959 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 1013
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N +
Sbjct: 1014 LEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 1072
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 1073 SQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 1132
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1133 EPGQRKIVMHKIRPHIATLRKYTYGKHILAK 1163
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 831 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 890
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 891 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 950
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 951 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 1008
Query: 425 VIQSAL 430
VIQ L
Sbjct: 1009 VIQRIL 1014
>gi|301777185|ref|XP_002924016.1| PREDICTED: pumilio homolog 1-like [Ailuropoda melanoleuca]
Length = 1114
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 157/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 774 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 833
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ + + ++ + L +G R + K LE + + QQ +V L
Sbjct: 834 FEFGSLEQKLALAERIRG---HVLSLALQMYGCRVIQKALEFIPSDQQNEMV-RELDGHV 889
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 890 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 949
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 950 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1009
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1010 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1061
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 134/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 827 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELD 886
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 887 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 941
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N +
Sbjct: 942 LEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 1000
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 1001 SQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 1060
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1061 EPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1091
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 759 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 818
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 819 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 878
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 879 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 936
Query: 425 VIQSAL 430
VIQ L
Sbjct: 937 VIQRIL 942
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + AL+ YGCR +QR + ++ I E+ +L+ D +GNYV+Q ++E
Sbjct: 921 FKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 980
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L+L+ F +V C+ TH R
Sbjct: 981 GRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAVLIDEVCTMNDGPHSA 1039
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1040 LYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYY 1096
>gi|296814620|ref|XP_002847647.1| APUM2 [Arthroderma otae CBS 113480]
gi|238840672|gb|EEQ30334.1| APUM2 [Arthroderma otae CBS 113480]
Length = 916
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 150/290 (51%), Gaps = 9/290 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+IV DQ+G R +Q + + +E E +F E+ +LM+D FGNYV+QKL
Sbjct: 512 LKDIYGHIVEFCGDQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKL 571
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + + L + T+G R V K LE++ QQ ++V L
Sbjct: 572 FEHGNQAQKRLLAQQMQGHIYSL---SVQTYGCRTVQKALEHVLVEQQATMV-KELEDSV 627
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ + NG++VIQ ++ +E +++++E AT GC V+Q +E+ A
Sbjct: 628 MKCVTNQNGNHVIQKAIERVPNEHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLAD 687
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R ++AEI A L D YGNYV+QH++ ++ + G V FS +K+ SNV
Sbjct: 688 RLSILAEIHACTPSLISDQYGNYVIQHIIEFGEEADKNKIISIVLGQAVHFSKHKFASNV 747
Query: 388 VERCLLESGEEQS---TRIIIELLRSPNVSM--LLMHPFGNYVIQSALLV 432
VE+ + EQ TRI+ + + L+ +GNYVIQ +L V
Sbjct: 748 VEKSITFGTLEQRLGITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSLSV 797
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ +Y L ++ + D+ G +Q +E + ++ER+ EI NA+ L D +GNY
Sbjct: 507 NKRYELKDIYGHIVEFCGDQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNY 566
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
V+Q L L +Q++GH S S YG V++ L EQ ++ EL S
Sbjct: 567 VIQKLFEHGNQAQKRLLAQQMQGHIYSLSVQTYGCRTVQKALEHVLVEQQATMVKELEDS 626
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
V + + GN+VIQ A+
Sbjct: 627 --VMKCVTNQNGNHVIQKAI 644
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 51/249 (20%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ ++G+I +L+ YGCR +Q+ + + E+ + E+ D V + + + GN+V+QK +
Sbjct: 585 QQMQGHIYSLSVQTYGCRTVQKALEHVLVEQQATMVKELEDSVMKCVTNQNGNHVIQKAI 644
Query: 209 ELCSEEQRTRILLMLTNDDF--QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E E I+ D+F Q+ R +T+G R + ++LE+ ++S +LA +
Sbjct: 645 ERVPNEHIRFII-----DEFRGQIPRYATHTYGCRVIQRMLEHCPLADRLS-ILAEIHAC 698
Query: 267 AVTLTKDTNGHYVIQYCVK-------------------HFSHED---------------- 291
+L D G+YVIQ+ ++ HFS
Sbjct: 699 TPSLISDQYGNYVIQHIIEFGEEADKNKIISIVLGQAVHFSKHKFASNVVEKSITFGTLE 758
Query: 292 -----TKYL--LNEVADN-CYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLA 343
T+ L +NE + G+ D+ G V+Q + +G+ + LV+ I+ LL
Sbjct: 759 QRLGITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSLSVLEGSDYKMLVSRIMPLMPLLK 818
Query: 344 EDCYGNYVV 352
+ YG +
Sbjct: 819 KCSYGKQIA 827
>gi|61098182|ref|NP_001012858.1| pumilio homolog 1 [Gallus gallus]
gi|60098393|emb|CAH65027.1| hypothetical protein RCJMB04_1f11 [Gallus gallus]
Length = 1093
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 158/293 (53%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 751 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 810
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + QQ I+ ++ L
Sbjct: 811 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGH 867
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 868 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPE 927
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 928 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 987
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 988 VVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1040
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 136/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 804 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRE 863
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 864 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 918
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P+Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 919 RILEHCL-PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 977
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 978 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1037
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1038 VAEPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1070
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 4/188 (2%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 736 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 795
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--Q 362
+ D G V+Q E+ Q+ L I + L LA YG V+Q L P Q
Sbjct: 796 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQ 855
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFG 422
+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 856 VINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYG 913
Query: 423 NYVIQSAL 430
VIQ L
Sbjct: 914 CRVIQRIL 921
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + AL+ YGCR +QR + E+ I E+ +L+
Sbjct: 894 QFIIDAF--------KGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQ 945
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L+L+ F +V C+ TH R
Sbjct: 946 DQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAML 1004
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +V+ +RP TL K T G
Sbjct: 1005 IDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYG 1064
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 1065 KHILAKLEKYY 1075
>gi|354547070|emb|CCE43803.1| hypothetical protein CPAR2_500290 [Candida parapsilosis]
Length = 800
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 153/288 (53%), Gaps = 10/288 (3%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
+L+D+ G+ V KDQ+G R +Q + EE E+IF E+ D +LM D FGNYV+QK
Sbjct: 477 TLKDIFGHGVEFTKDQHGSRFIQTKLPQSSDEEKEVIFKEICDISFDLMTDVFGNYVMQK 536
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E SE+Q+ +L + ++L L T+G R V + LE+L Q+ ++L L+
Sbjct: 537 YFEYGSEQQKQILLQKMLGHIYEL---SLQTYGCRVVQRALESLQEQDQLKIIL-ELQDK 592
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ D N ++VIQ ++ + +++L+ + + Y + TD+ GC V+Q + +
Sbjct: 593 VLVCATDQNSNHVIQKSIELIDFDKVRFILDVLTGHFYHLCTDQYGCRVVQRLIHFGNDK 652
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLA--LRVPQITASLLRQLEGHYVSFSCNKYG 384
++ + E+ ++ L +GNYV+Q L LR I +++ + + F+ NKY
Sbjct: 653 DKQMIYNEVESHLGFLITHKFGNYVIQACLENQLREQDIFTTVVCK----FTHFATNKYA 708
Query: 385 SNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLV 432
SNV E+ + + + Q +I+ ++ + ++ +GNYV+Q + V
Sbjct: 709 SNVCEKLVDSATQLQLQKILEVVMHGNELERIMGDEYGNYVVQKIVSV 756
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 38/212 (17%)
Query: 255 QISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCC 314
Q S L + V TKD +G IQ + S E+ + + E+ D + + TD G
Sbjct: 473 QSSYTLKDIFGHGVEFTKDQHGSRFIQTKLPQSSDEEKEVIFKEICDISFDLMTDVFGNY 532
Query: 315 VLQHCVEYSKGAQRERLVAEIIANALLLAEDCYG-------------------------- 348
V+Q EY Q++ L+ +++ + L+ YG
Sbjct: 533 VMQKYFEYGSEQQKQILLQKMLGHIYELSLQTYGCRVVQRALESLQEQDQLKIILELQDK 592
Query: 349 ----------NYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEE 398
N+V+Q + L +L L GH+ ++YG VV+R L+ G +
Sbjct: 593 VLVCATDQNSNHVIQKSIELIDFDKVRFILDVLTGHFYHLCTDQYGCRVVQR-LIHFGND 651
Query: 399 QSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ ++I + S ++ L+ H FGNYVIQ+ L
Sbjct: 652 KDKQMIYNEVES-HLGFLITHKFGNYVIQACL 682
>gi|440298417|gb|ELP91053.1| hypothetical protein EIN_267890 [Entamoeba invadens IP1]
Length = 459
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 166/334 (49%), Gaps = 14/334 (4%)
Query: 105 HNHNFDGLRSNGNELSSVPRNQWMSSLSLKRNQWLQDSFDCSS---LRDLRGNIVALAKD 161
HN + ++ EL + ++ M L +++ + G + +
Sbjct: 99 HNDHIKIIKPTQQELEKIAKSTSMPLLHFSIQSKMENDKKAHPKLIASEFVGQFNQMTRY 158
Query: 162 QYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILL 221
GC LQ+ +S+ +E ++MIF EV + L+I P G +++ ++ E SEE + I
Sbjct: 159 TSGCAILQKILSNPSQEIVQMIFDEVESDLDSLIIHPNGQHILPQMAEFGSEEVQDAIYN 218
Query: 222 MLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQ 281
+ D LV+ C + G K+ + + I++ LR L D +G+YVIQ
Sbjct: 219 TMAKD---LVKYCCHQFGGYTAQKVAPYMKK-RHIAMWAPTLRNNMALLAIDPHGNYVIQ 274
Query: 282 YCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALL 341
+K FS D + N + + IA K GC VL H +E S +Q +++ ++I +
Sbjct: 275 TLLKIFSDNDVDFFYNGMQNCVTKIAKTKVGCSVLTHAMESSSQSQIDKIKPKLIEDCCD 334
Query: 342 LAEDCYGNYVVQHLL---ALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEE 398
L +D +GN+V+Q L+ A VP IT R + V +S K+ SNVVE+CL GEE
Sbjct: 335 LIQDQFGNFVIQRLIDCDASVVPAIT----RYIAEDAVFYSKQKFSSNVVEKCLKCGGEE 390
Query: 399 QSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLV 432
+ + +I LL + +VS+L+ FGN+VIQ+ L V
Sbjct: 391 EVSILIDALLNTESVSVLIEDQFGNFVIQALLDV 424
>gi|405977786|gb|EKC42220.1| Pumilio-like protein 2 [Crassostrea gigas]
Length = 1012
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 150/294 (51%), Gaps = 9/294 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+DL ++V ++DQ+G R +Q+ + +E ++F E++ LM D FGNYV+QK
Sbjct: 671 LKDLNNHVVEFSQDQHGSRFIQQKLERASPQEKNVVFNEILAHAYSLMTDVFGNYVIQKF 730
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ + L ++ + L +G R + K LE + + Q+ +V L
Sbjct: 731 FEFGSNEQKQTLAQRLRG---HVLPLALQMYGCRVIQKALETIPSDLQVEIV-KELDGHV 786
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V KD NG++V+Q C++ +++++ ++T GC V+Q +E+ Q
Sbjct: 787 VKCVKDQNGNHVVQKCIECVDPIHLQFIIDAFKGQVLALSTHPYGCRVIQRILEHCTKEQ 846
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ L +D YGNYVVQH+L + ++ ++ G + S +K+ SNV
Sbjct: 847 ITPILEELHQTTERLVQDQYGNYVVQHVLEHGSHDDKSKIVAEIRGKVLVLSQHKFASNV 906
Query: 388 VERCLLESGEEQSTRIIIE---LLRSPNVSMLLM--HPFGNYVIQSALLVSKVR 436
VE+C+ S + +I E L P ++ +M F NYV+Q + V++ +
Sbjct: 907 VEKCVSYSSRAEKAMLIEEVCALTDGPQSALYIMMKDQFANYVVQKMIDVAEPK 960
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 131/249 (52%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
LRG+++ LA YGCR +Q+ + ++P + I E+ V + + D GN+VVQK +E
Sbjct: 746 LRGHVLPLALQMYGCRVIQKALETIPSDLQVEIVKELDGHVVKCVKDQNGNHVVQKCIEC 805
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
I L D F+ + L+TH G R + ++LE+ T +QI+ +L L
Sbjct: 806 VDP-----IHLQFIIDAFKGQVLALSTHPYGCRVIQRILEHCTK-EQITPILEELHQTTE 859
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YV+Q+ ++H SH+D ++ E+ ++ K V++ CV YS A++
Sbjct: 860 RLVQDQYGNYVVQHVLEHGSHDDKSKIVAEIRGKVLVLSQHKFASNVVEKCVSYSSRAEK 919
Query: 329 ERLVAEIIA------NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ A +AL ++ +D + NYVVQ ++ + P+ L+ ++ H +
Sbjct: 920 AMLIEEVCALTDGPQSALYIMMKDQFANYVVQKMIDVAEPKQRNILMHKIRPHIATLRKY 979
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 980 TYGKHILAK 988
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 3/201 (1%)
Query: 230 LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSH 289
+ R L+ G +LLE+ N + +L L L V ++D +G IQ ++ S
Sbjct: 642 ITRSSLSKEGT-GRSRLLEDFRNNRIPNLQLKDLNNHVVEFSQDQHGSRFIQQKLERASP 700
Query: 290 EDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGN 349
++ + NE+ + Y + TD G V+Q E+ Q++ L + + L LA YG
Sbjct: 701 QEKNVVFNEILAHAYSLMTDVFGNYVIQKFFEFGSNEQKQTLAQRLRGHVLPLALQMYGC 760
Query: 350 YVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLR 409
V+Q L + ++++L+GH V ++ G++VV++C +E + + II+ +
Sbjct: 761 RVIQKALETIPSDLQVEIVKELDGHVVKCVKDQNGNHVVQKC-IECVDPIHLQFIIDAFK 819
Query: 410 SPNVSMLLMHPFGNYVIQSAL 430
V L HP+G VIQ L
Sbjct: 820 G-QVLALSTHPYGCRVIQRIL 839
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 85/190 (44%), Gaps = 47/190 (24%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G ++AL+ YGCR +QR + KE+I I E+ L+
Sbjct: 812 QFIIDAF--------KGQVLALSTHPYGCRVIQRILEHCTKEQITPILEELHQTTERLVQ 863
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDFQ-------------------L 230
D +GNYVVQ ++E S + +++I+ L+L+ F +
Sbjct: 864 DQYGNYVVQHVLEHGSHDDKSKIVAEIRGKVLVLSQHKFASNVVEKCVSYSSRAEKAMLI 923
Query: 231 VRICLNTHGIRAVLKLLE-------------NLTNPQQISLVLAALRPGAVTLTKDTNGH 277
+C T G ++ L ++ ++ P+Q ++++ +RP TL K T G
Sbjct: 924 EEVCALTDGPQSALYIMMKDQFANYVVQKMIDVAEPKQRNILMHKIRPHIATLRKYTYGK 983
Query: 278 YVIQYCVKHF 287
+++ K F
Sbjct: 984 HILAKLEKFF 993
>gi|327286697|ref|XP_003228066.1| PREDICTED: pumilio homolog 1-like isoform 1 [Anolis carolinensis]
Length = 1184
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 156/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 844 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 903
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE P Q + ++ L
Sbjct: 904 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALE-FIPPDQQNEMVRELDGHV 959
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 960 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQ 1019
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 1020 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1079
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1080 VEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1131
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 135/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 897 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQNEMVRELD 956
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 957 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 1011
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P+Q +L L L +D G+YVIQ+ ++H ED ++ E+ N +
Sbjct: 1012 LEHCL-PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 1070
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 1071 SQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 1130
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1131 EPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1161
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 829 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 888
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L P
Sbjct: 889 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQ 948
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 949 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 1006
Query: 425 VIQSAL 430
VIQ L
Sbjct: 1007 VIQRIL 1012
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + AL+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 991 FKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1050
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L+L+ F +V C+ TH R
Sbjct: 1051 GRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAMLIDEVCTMNDGPHSA 1109
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1110 LYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYY 1166
>gi|395526794|ref|XP_003765541.1| PREDICTED: pumilio homolog 1 isoform 2 [Sarcophilus harrisii]
Length = 1094
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 158/293 (53%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 752 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 811
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + QQ I+ ++ L
Sbjct: 812 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGH 868
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 869 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPE 928
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 929 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 988
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 989 VVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1041
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 136/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 805 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRE 864
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 865 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 919
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P+Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 920 RILEHCL-PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 978
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 979 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1038
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1039 VAEPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1071
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 4/188 (2%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 737 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 796
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--Q 362
+ D G V+Q E+ Q+ L I + L LA YG V+Q L P Q
Sbjct: 797 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQ 856
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFG 422
+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 857 VINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYG 914
Query: 423 NYVIQSAL 430
VIQ L
Sbjct: 915 CRVIQRIL 922
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + AL+ YGCR +QR + E+ I E+ +L+
Sbjct: 895 QFIIDAF--------KGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQ 946
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L+L+ F +V C+ TH R
Sbjct: 947 DQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAML 1005
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +V+ +RP TL K T G
Sbjct: 1006 IDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYG 1065
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 1066 KHILAKLEKYY 1076
>gi|327286699|ref|XP_003228067.1| PREDICTED: pumilio homolog 1-like isoform 2 [Anolis carolinensis]
Length = 1091
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 158/293 (53%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 749 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 808
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + QQ I+ ++ L
Sbjct: 809 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGH 865
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 866 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPE 925
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 926 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 985
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 986 VVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1038
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 136/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 802 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRE 861
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 862 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 916
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P+Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 917 RILEHCL-PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 975
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 976 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1035
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1036 VAEPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1068
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 4/188 (2%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 734 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 793
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--Q 362
+ D G V+Q E+ Q+ L I + L LA YG V+Q L P Q
Sbjct: 794 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQ 853
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFG 422
+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 854 VINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYG 911
Query: 423 NYVIQSAL 430
VIQ L
Sbjct: 912 CRVIQRIL 919
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + AL+ YGCR +QR + E+ I E+ +L+
Sbjct: 892 QFIIDAF--------KGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQ 943
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L+L+ F +V C+ TH R
Sbjct: 944 DQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAML 1002
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +V+ +RP TL K T G
Sbjct: 1003 IDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYG 1062
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 1063 KHILAKLEKYY 1073
>gi|148229513|ref|NP_001081119.1| pumilio homolog 1 [Xenopus laevis]
gi|51513460|gb|AAH80379.1| Pum1-A protein [Xenopus laevis]
Length = 1190
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 158/293 (53%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 848 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 907
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + QQ I+ ++ L
Sbjct: 908 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGH 964
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 965 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRVIQRILEHCLPE 1024
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1025 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1084
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1085 VVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1137
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 136/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 901 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRE 960
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 961 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKSQVFALSTHPYGCRVIQ 1015
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P+Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 1016 RILEHCL-PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1074
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 1075 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1134
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1135 VAEPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1167
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 4/188 (2%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 833 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 892
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--Q 362
+ D G V+Q E+ Q+ L I + L LA YG V+Q L P Q
Sbjct: 893 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQ 952
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFG 422
+ ++R+L+GH + ++ G++VV++C +E + QS + II+ +S V L HP+G
Sbjct: 953 VINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKS-QVFALSTHPYG 1010
Query: 423 NYVIQSAL 430
VIQ L
Sbjct: 1011 CRVIQRIL 1018
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+ + AL+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 997 FKSQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1056
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L+L+ F +V C+ TH R
Sbjct: 1057 GRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAMLIDEVCTMNDGPHSA 1115
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1116 LYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYY 1172
>gi|410966646|ref|XP_003989841.1| PREDICTED: pumilio homolog 1 isoform 1 [Felis catus]
Length = 1186
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 157/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 906 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRE-LDGHV 961
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 962 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 1021
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 1022 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1081
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1082 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1133
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 134/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 899 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELD 958
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 959 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 1013
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N +
Sbjct: 1014 LEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 1072
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 1073 SQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 1132
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1133 EPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1163
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 831 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 890
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 891 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 950
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 951 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 1008
Query: 425 VIQSAL 430
VIQ L
Sbjct: 1009 VIQRIL 1014
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + AL+ YGCR +QR + ++ I E+ +L+ D +GNYV+Q ++E
Sbjct: 993 FKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1052
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L+L+ F +V C+ TH R
Sbjct: 1053 GRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAVLIDEVCTMNDGPHSA 1111
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1112 LYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYY 1168
>gi|395526792|ref|XP_003765540.1| PREDICTED: pumilio homolog 1 isoform 1 [Sarcophilus harrisii]
Length = 1188
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 156/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 848 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 907
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE P Q + ++ L
Sbjct: 908 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALE-FIPPDQQNEMVRELDGHV 963
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 964 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQ 1023
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 1024 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1083
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1084 VEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1135
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 135/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 901 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQNEMVRELD 960
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 961 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 1015
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P+Q +L L L +D G+YVIQ+ ++H ED ++ E+ N +
Sbjct: 1016 LEHCL-PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 1074
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 1075 SQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 1134
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1135 EPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1165
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 833 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 892
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L P
Sbjct: 893 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQ 952
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 953 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 1010
Query: 425 VIQSAL 430
VIQ L
Sbjct: 1011 VIQRIL 1016
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + AL+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 995 FKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1054
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L+L+ F +V C+ TH R
Sbjct: 1055 GRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAMLIDEVCTMNDGPHSA 1113
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1114 LYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYY 1170
>gi|28804566|dbj|BAC57980.1| Pumilio [Xenopus laevis]
Length = 1185
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 158/293 (53%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 843 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 902
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + QQ I+ ++ L
Sbjct: 903 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGH 959
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 960 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRVIQRILEHCLPE 1019
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1020 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1079
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1080 VVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1132
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 136/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 896 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRE 955
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 956 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKSQVFALSTHPYGCRVIQ 1010
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P+Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 1011 RILEHCL-PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1069
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 1070 VLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1129
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1130 VAEPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1162
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 4/188 (2%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 828 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 887
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--Q 362
+ D G V+Q E+ Q+ L I + L LA YG V+Q L P Q
Sbjct: 888 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQ 947
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFG 422
+ ++R+L+GH + ++ G++VV++C +E + QS + II+ +S V L HP+G
Sbjct: 948 VINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKS-QVFALSTHPYG 1005
Query: 423 NYVIQSAL 430
VIQ L
Sbjct: 1006 CRVIQRIL 1013
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+ + AL+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 992 FKSQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1051
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L+L+ F +V C+ TH R
Sbjct: 1052 GRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAMLIDEVCTMNDGPHSA 1110
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1111 LYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYY 1167
>gi|73950060|ref|XP_865319.1| PREDICTED: pumilio homolog 1 isoform 14 [Canis lupus familiaris]
Length = 1186
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 157/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 906 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRE-LDGHV 961
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 962 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 1021
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 1022 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1081
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1082 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1133
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 134/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 899 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELD 958
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 959 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 1013
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N +
Sbjct: 1014 LEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 1072
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 1073 SQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 1132
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1133 EPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1163
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 831 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 890
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 891 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 950
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 951 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 1008
Query: 425 VIQSAL 430
VIQ L
Sbjct: 1009 VIQRIL 1014
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + AL+ YGCR +QR + ++ I E+ +L+ D +GNYV+Q ++E
Sbjct: 993 FKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1052
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L+L+ F +V C+ TH R
Sbjct: 1053 GRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAVLIDEVCTMNDGPHSA 1111
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1112 LYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYY 1168
>gi|300797595|ref|NP_001180052.1| pumilio homolog 1 [Bos taurus]
gi|296490233|tpg|DAA32346.1| TPA: pumilio homolog 1 [Bos taurus]
Length = 1186
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 157/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 906 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRE-LDGHV 961
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 962 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 1021
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 1022 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1081
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1082 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1133
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 134/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 899 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELD 958
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 959 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 1013
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N +
Sbjct: 1014 LEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 1072
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 1073 SQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 1132
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1133 EPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1163
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 831 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 890
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 891 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 950
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 951 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 1008
Query: 425 VIQSAL 430
VIQ L
Sbjct: 1009 VIQRIL 1014
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + AL+ YGCR +QR + ++ I E+ +L+ D +GNYV+Q ++E
Sbjct: 993 FKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1052
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L+L+ F +V C+ TH R
Sbjct: 1053 GRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAVLIDEVCTMNDGPHSA 1111
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1112 LYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYY 1168
>gi|13491166|ref|NP_055491.1| pumilio homolog 1 isoform 2 [Homo sapiens]
gi|332808248|ref|XP_001157169.2| PREDICTED: pumilio homolog 1 isoform 3 [Pan troglodytes]
gi|397515861|ref|XP_003828160.1| PREDICTED: pumilio homolog 1 isoform 1 [Pan paniscus]
gi|402853679|ref|XP_003891518.1| PREDICTED: pumilio homolog 1 isoform 1 [Papio anubis]
gi|41688619|sp|Q14671.3|PUM1_HUMAN RecName: Full=Pumilio homolog 1; Short=HsPUM; Short=Pumilio-1
gi|11139706|gb|AAG31807.1|AF315592_1 Pumilio 1 [Homo sapiens]
gi|15426559|gb|AAH13398.1| Pumilio homolog 1 (Drosophila) [Homo sapiens]
gi|119628038|gb|EAX07633.1| pumilio homolog 1 (Drosophila), isoform CRA_d [Homo sapiens]
gi|119628039|gb|EAX07634.1| pumilio homolog 1 (Drosophila), isoform CRA_d [Homo sapiens]
gi|158256990|dbj|BAF84468.1| unnamed protein product [Homo sapiens]
gi|325463587|gb|ADZ15564.1| pumilio homolog 1 (Drosophila) [synthetic construct]
gi|380784597|gb|AFE64174.1| pumilio homolog 1 isoform 2 [Macaca mulatta]
gi|383410801|gb|AFH28614.1| pumilio homolog 1 isoform 2 [Macaca mulatta]
gi|384943766|gb|AFI35488.1| pumilio homolog 1 isoform 2 [Macaca mulatta]
gi|410225216|gb|JAA09827.1| pumilio homolog 1 [Pan troglodytes]
gi|410266288|gb|JAA21110.1| pumilio homolog 1 [Pan troglodytes]
gi|410304036|gb|JAA30618.1| pumilio homolog 1 [Pan troglodytes]
gi|410350699|gb|JAA41953.1| pumilio homolog 1 [Pan troglodytes]
Length = 1186
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 157/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 906 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRE-LDGHV 961
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 962 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 1021
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 1022 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1081
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1082 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1133
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 134/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 899 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELD 958
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 959 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 1013
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N +
Sbjct: 1014 LEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 1072
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 1073 SQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 1132
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1133 EPGQRKIVMHKIRPHIATLRKYTYGKHILAK 1163
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 831 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 890
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 891 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 950
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 951 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 1008
Query: 425 VIQSAL 430
VIQ L
Sbjct: 1009 VIQRIL 1014
>gi|403293270|ref|XP_003937643.1| PREDICTED: pumilio homolog 1 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1186
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 157/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 906 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRE-LDGHV 961
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 962 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 1021
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 1022 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1081
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1082 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1133
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 134/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 899 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELD 958
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 959 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 1013
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N +
Sbjct: 1014 LEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 1072
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 1073 SQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 1132
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1133 EPGQRKIVMHKIRPHIATLRKYTYGKHILAK 1163
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 831 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 890
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 891 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 950
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 951 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 1008
Query: 425 VIQSAL 430
VIQ L
Sbjct: 1009 VIQRIL 1014
>gi|391872405|gb|EIT81532.1| translational repressor Pumilio/PUF3 [Aspergillus oryzae 3.042]
Length = 906
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 152/289 (52%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ ++V + DQ+G R +Q+ + + +E E +F E+ +LM D FGNYVVQKL
Sbjct: 489 LKDIYNHVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVFGNYVVQKL 548
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + ++ + +G R V K LE++ QQ S+V L
Sbjct: 549 FEHGNQTQKKILANQMKG---HILALSTQMYGCRVVQKALEHILTDQQASMV-KELEHHV 604
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ ++ E ++++N +AT GC V+Q +E+ K
Sbjct: 605 LRCVRDQNGNHVIQKAIERVPSEHVQFVINAFIGQVEKLATHPYGCRVIQRMLEHCKEED 664
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
RE ++AE+ L D +GNYV+QH++ + ++ + + +++S +K+ SNV
Sbjct: 665 REAILAELHVCTAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMSNLLTYSKHKFASNV 724
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVS------MLLMHPFGNYVIQSAL 430
VE+ +E G+E II +L S + + L+ FGNYVIQ L
Sbjct: 725 VEKS-IEFGQESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVL 772
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 96/219 (43%), Gaps = 47/219 (21%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
S +++L +++ +DQ G +Q+ + +P E ++ + I +V +L P+G V+
Sbjct: 594 ASMVKELEHHVLRCVRDQNGNHVIQKAIERVPSEHVQFVINAFIGQVEKLATHPYGCRVI 653
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
Q+++E C EE R IL L +C
Sbjct: 654 QRMLEHCKEEDREAILAEL--------HVC------------------------------ 675
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
L D G+YVIQ+ +++ +D ++ V N + K V++ +E+ +
Sbjct: 676 --TAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMSNLLTYSKHKFASNVVEKSIEFGQ 733
Query: 325 GAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLL 356
+QR ++++ + + N LL L D +GNYV+Q +L
Sbjct: 734 ESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVL 772
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S + +Y L ++ ++ + D+ G +Q +E + ++E++ EI ++L L D +
Sbjct: 481 SKGNKRYELKDIYNHVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVF 540
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYVVQ L L Q++GH ++ S YG VV++ L +Q ++ EL
Sbjct: 541 GNYVVQKLFEHGNQTQKKILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKEL 600
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 601 EH--HVLRCVRDQNGNHVIQKAI 621
>gi|431891161|gb|ELK02038.1| Pumilio like protein 1 [Pteropus alecto]
Length = 1349
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 157/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 878 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 937
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 938 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRE-LDGHV 993
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 994 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 1053
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 1054 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1113
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1114 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1165
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 131/266 (49%), Gaps = 22/266 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 931 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELD 990
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 991 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 1045
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N +
Sbjct: 1046 LEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 1104
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NAL-LLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 1105 SQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 1164
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGS 385
P ++ ++ H + YG+
Sbjct: 1165 EPAQRKIVMHKIRPHIATLRKYTYGT 1190
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 863 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 922
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 923 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 982
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 983 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 1040
Query: 425 VIQSAL 430
VIQ L
Sbjct: 1041 VIQRIL 1046
>gi|226293282|gb|EEH48702.1| mRNA binding protein Pumilio 2 [Paracoccidioides brasiliensis Pb18]
Length = 958
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 150/289 (51%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ +IV + DQ+G R +Q + S +E + +F E+ +LM D FGNYVVQKL
Sbjct: 529 LKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDKVFREIQLNSLQLMTDVFGNYVVQKL 588
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ RIL ++ + +G R V K LE++ QQ S+V L
Sbjct: 589 FEHGNQSQK-RILANQMKG--HILALSTQMYGCRVVQKALEHILTDQQASMV-KELENHV 644
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ V+ ++++N +A GC V+Q +E+
Sbjct: 645 LKCVKDQNGNHVIQKAVERVPTVHIQFIINAFKGQVNRLAAHPYGCRVIQRMLEHCNEGD 704
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R+ ++AE+ + + L D +GNYV+QH+L ++ + + FS +K+ SNV
Sbjct: 705 RQAILAELHSCSASLIPDQFGNYVIQHILENGEEHDKVKIISIVISQLLVFSKHKFASNV 764
Query: 388 VERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSAL 430
VE+ +E G E + I++LL +PN + L+ +GNYVIQ L
Sbjct: 765 VEKS-IEFGAEDQRKEILQLLTTPNDRGENPLLGLMRDQYGNYVIQKVL 812
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 122/254 (48%), Gaps = 13/254 (5%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+I+AL+ YGCR +Q+ + + ++ + E+ + V + + D GN+V+QK VE
Sbjct: 604 MKGHILALSTQMYGCRVVQKALEHILTDQQASMVKELENHVLKCVKDQNGNHVIQKAVER 663
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
I ++ Q+ R+ + +G R + ++LE+ N +LA L + +L
Sbjct: 664 VPT---VHIQFIINAFKGQVNRLAAHPYGCRVIQRMLEHC-NEGDRQAILAELHSCSASL 719
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
D G+YVIQ+ +++ D +++ V + K V++ +E+ QR+
Sbjct: 720 IPDQFGNYVIQHILENGEEHDKVKIISIVISQLLVFSKHKFASNVVEKSIEFGAEDQRKE 779
Query: 331 LVAEIIA------NALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
++ + N LL L D YGNYV+Q +L +L+ Q+E + Y
Sbjct: 780 ILQLLTTPNDRGENPLLGLMRDQYGNYVIQKVLGQLKGSERENLVSQIEPQLIHLKKFSY 839
Query: 384 GSNVV--ERCLLES 395
G +V E+ + +S
Sbjct: 840 GKQIVAIEKLIYDS 853
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 103/215 (47%), Gaps = 11/215 (5%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
S +++L +++ KDQ G +Q+ + +P I+ I +V L P+G V+
Sbjct: 634 ASMVKELENHVLKCVKDQNGNHVIQKAVERVPTVHIQFIINAFKGQVNRLAAHPYGCRVI 693
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
Q+++E C+E R IL L + L+ + I+ +L+ E + IS+V++ L
Sbjct: 694 QRMLEHCNEGDRQAILAELHSCSASLIPDQFGNYVIQHILENGEEHDKVKIISIVISQL- 752
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLL------NEVADN-CYGIATDKSGCCVLQ 317
+ +K V++ ++ + + K +L N+ +N G+ D+ G V+Q
Sbjct: 753 ---LVFSKHKFASNVVEKSIEFGAEDQRKEILQLLTTPNDRGENPLLGLMRDQYGNYVIQ 809
Query: 318 HCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
+ KG++RE LV++I + L + YG +V
Sbjct: 810 KVLGQLKGSERENLVSQIEPQLIHLKKFSYGKQIV 844
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ +Y L ++ ++ + D+ G +QH +E + +++++ EI N+L L D +GNY
Sbjct: 524 NKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDKVFREIQLNSLQLMTDVFGNY 583
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
VVQ L L Q++GH ++ S YG VV++ L +Q ++ EL
Sbjct: 584 VVQKLFEHGNQSQKRILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKELEN- 642
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 643 -HVLKCVKDQNGNHVIQKAV 661
>gi|317148910|ref|XP_001823002.2| mRNA binding protein Pumilio 2 [Aspergillus oryzae RIB40]
Length = 880
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 152/289 (52%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ ++V + DQ+G R +Q+ + + +E E +F E+ +LM D FGNYVVQKL
Sbjct: 463 LKDIYNHVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVFGNYVVQKL 522
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ ++ ++ + +G R V K LE++ QQ S+V L
Sbjct: 523 FEHGNQTQKK---ILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMV-KELEHHV 578
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ ++ E ++++N +AT GC V+Q +E+ K
Sbjct: 579 LRCVRDQNGNHVIQKAIERVPSEHVQFVINAFIGQVEKLATHPYGCRVIQRMLEHCKEED 638
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
RE ++AE+ L D +GNYV+QH++ + ++ + + +++S +K+ SNV
Sbjct: 639 REAILAELHVCTAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMSNLLTYSKHKFASNV 698
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVS------MLLMHPFGNYVIQSAL 430
VE+ +E G+E II +L S + + L+ FGNYVIQ L
Sbjct: 699 VEKS-IEFGQESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVL 746
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 96/219 (43%), Gaps = 47/219 (21%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
S +++L +++ +DQ G +Q+ + +P E ++ + I +V +L P+G V+
Sbjct: 568 ASMVKELEHHVLRCVRDQNGNHVIQKAIERVPSEHVQFVINAFIGQVEKLATHPYGCRVI 627
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
Q+++E C EE R IL L +C
Sbjct: 628 QRMLEHCKEEDREAILAEL--------HVC------------------------------ 649
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
L D G+YVIQ+ +++ +D ++ V N + K V++ +E+ +
Sbjct: 650 --TAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMSNLLTYSKHKFASNVVEKSIEFGQ 707
Query: 325 GAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLL 356
+QR ++++ + + N LL L D +GNYV+Q +L
Sbjct: 708 ESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVL 746
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S + +Y L ++ ++ + D+ G +Q +E + ++E++ EI ++L L D +
Sbjct: 455 SKGNKRYELKDIYNHVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVF 514
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYVVQ L L Q++GH ++ S YG VV++ L +Q ++ EL
Sbjct: 515 GNYVVQKLFEHGNQTQKKILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKEL 574
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 575 EH--HVLRCVRDQNGNHVIQKAI 595
>gi|126330276|ref|XP_001367437.1| PREDICTED: pumilio homolog 1 isoform 1 [Monodelphis domestica]
Length = 1188
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 156/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 848 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 907
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE P Q + ++ L
Sbjct: 908 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALE-FIPPDQQNEMVRELDGHV 963
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 964 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQ 1023
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 1024 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1083
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1084 VEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1135
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 135/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 901 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQNEMVRELD 960
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 961 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 1015
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P+Q +L L L +D G+YVIQ+ ++H ED ++ E+ N +
Sbjct: 1016 LEHCL-PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 1074
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 1075 SQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 1134
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1135 EPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1165
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 833 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 892
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L P
Sbjct: 893 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQ 952
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 953 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 1010
Query: 425 VIQSAL 430
VIQ L
Sbjct: 1011 VIQRIL 1016
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + AL+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 995 FKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1054
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L+L+ F +V C+ TH R
Sbjct: 1055 GRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAMLIDEVCTMNDGPHSA 1113
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1114 LYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYY 1170
>gi|83771739|dbj|BAE61869.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 860
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 152/289 (52%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ ++V + DQ+G R +Q+ + + +E E +F E+ +LM D FGNYVVQKL
Sbjct: 443 LKDIYNHVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVFGNYVVQKL 502
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ ++ ++ + +G R V K LE++ QQ S+V L
Sbjct: 503 FEHGNQTQKK---ILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMV-KELEHHV 558
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ ++ E ++++N +AT GC V+Q +E+ K
Sbjct: 559 LRCVRDQNGNHVIQKAIERVPSEHVQFVINAFIGQVEKLATHPYGCRVIQRMLEHCKEED 618
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
RE ++AE+ L D +GNYV+QH++ + ++ + + +++S +K+ SNV
Sbjct: 619 REAILAELHVCTAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMSNLLTYSKHKFASNV 678
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVS------MLLMHPFGNYVIQSAL 430
VE+ +E G+E II +L S + + L+ FGNYVIQ L
Sbjct: 679 VEKS-IEFGQESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVL 726
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 96/219 (43%), Gaps = 47/219 (21%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
S +++L +++ +DQ G +Q+ + +P E ++ + I +V +L P+G V+
Sbjct: 548 ASMVKELEHHVLRCVRDQNGNHVIQKAIERVPSEHVQFVINAFIGQVEKLATHPYGCRVI 607
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
Q+++E C EE R IL L +C
Sbjct: 608 QRMLEHCKEEDREAILAEL--------HVC------------------------------ 629
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
L D G+YVIQ+ +++ +D ++ V N + K V++ +E+ +
Sbjct: 630 --TAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMSNLLTYSKHKFASNVVEKSIEFGQ 687
Query: 325 GAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLL 356
+QR ++++ + + N LL L D +GNYV+Q +L
Sbjct: 688 ESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVL 726
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S + +Y L ++ ++ + D+ G +Q +E + ++E++ EI ++L L D +
Sbjct: 435 SKGNKRYELKDIYNHVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVF 494
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYVVQ L L Q++GH ++ S YG VV++ L +Q ++ EL
Sbjct: 495 GNYVVQKLFEHGNQTQKKILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKEL 554
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 555 EH--HVLRCVRDQNGNHVIQKAI 575
>gi|225683895|gb|EEH22179.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 932
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 150/289 (51%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ +IV + DQ+G R +Q + S +E + +F E+ +LM D FGNYVVQKL
Sbjct: 503 LKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDKVFREIQLNSLQLMTDVFGNYVVQKL 562
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ RIL ++ + +G R V K LE++ QQ S+V L
Sbjct: 563 FEHGNQSQK-RILANQMKG--HILALSTQMYGCRVVQKALEHILTDQQASMV-KELENHV 618
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ V+ ++++N +A GC V+Q +E+
Sbjct: 619 LKCVKDQNGNHVIQKAVERVPTVHIQFIINAFKGQVNRLAAHPYGCRVIQRMLEHCNEGD 678
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R+ ++AE+ + + L D +GNYV+QH+L ++ + + FS +K+ SNV
Sbjct: 679 RQAILAELHSCSASLIPDQFGNYVIQHILENGEEHDKVKIISIVISQLLVFSKHKFASNV 738
Query: 388 VERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSAL 430
VE+ +E G E + I++LL +PN + L+ +GNYVIQ L
Sbjct: 739 VEKS-IEFGAEDQRKEILQLLTTPNDRGENPLLGLMRDQYGNYVIQKVL 786
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 122/254 (48%), Gaps = 13/254 (5%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+I+AL+ YGCR +Q+ + + ++ + E+ + V + + D GN+V+QK VE
Sbjct: 578 MKGHILALSTQMYGCRVVQKALEHILTDQQASMVKELENHVLKCVKDQNGNHVIQKAVER 637
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
I ++ Q+ R+ + +G R + ++LE+ N +LA L + +L
Sbjct: 638 VPT---VHIQFIINAFKGQVNRLAAHPYGCRVIQRMLEHC-NEGDRQAILAELHSCSASL 693
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
D G+YVIQ+ +++ D +++ V + K V++ +E+ QR+
Sbjct: 694 IPDQFGNYVIQHILENGEEHDKVKIISIVISQLLVFSKHKFASNVVEKSIEFGAEDQRKE 753
Query: 331 LVAEIIA------NALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
++ + N LL L D YGNYV+Q +L +L+ Q+E + Y
Sbjct: 754 ILQLLTTPNDRGENPLLGLMRDQYGNYVIQKVLGQLKGSERENLVSQIEPQLIHLKKFSY 813
Query: 384 GSNVV--ERCLLES 395
G +V E+ + +S
Sbjct: 814 GKQIVAIEKLIYDS 827
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 103/215 (47%), Gaps = 11/215 (5%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
S +++L +++ KDQ G +Q+ + +P I+ I +V L P+G V+
Sbjct: 608 ASMVKELENHVLKCVKDQNGNHVIQKAVERVPTVHIQFIINAFKGQVNRLAAHPYGCRVI 667
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
Q+++E C+E R IL L + L+ + I+ +L+ E + IS+V++ L
Sbjct: 668 QRMLEHCNEGDRQAILAELHSCSASLIPDQFGNYVIQHILENGEEHDKVKIISIVISQL- 726
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLL------NEVADN-CYGIATDKSGCCVLQ 317
+ +K V++ ++ + + K +L N+ +N G+ D+ G V+Q
Sbjct: 727 ---LVFSKHKFASNVVEKSIEFGAEDQRKEILQLLTTPNDRGENPLLGLMRDQYGNYVIQ 783
Query: 318 HCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
+ KG++RE LV++I + L + YG +V
Sbjct: 784 KVLGQLKGSERENLVSQIEPQLIHLKKFSYGKQIV 818
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ +Y L ++ ++ + D+ G +QH +E + +++++ EI N+L L D +GNY
Sbjct: 498 NKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDKVFREIQLNSLQLMTDVFGNY 557
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
VVQ L L Q++GH ++ S YG VV++ L +Q ++ EL
Sbjct: 558 VVQKLFEHGNQSQKRILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKELEN- 616
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 617 -HVLKCVKDQNGNHVIQKAV 635
>gi|348513123|ref|XP_003444092.1| PREDICTED: pumilio homolog 1-like [Oreochromis niloticus]
Length = 1163
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 155/293 (52%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRD+ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 821 LRDIAGHIMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKF 880
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S +Q+ L + ++ + L +G R + K LE + + QQ IS ++ L
Sbjct: 881 FEFGSLDQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGH 937
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ +++ + ++T GC V+Q +E+
Sbjct: 938 VLKCVKDQNGNHVVQKCIECVQPHALHFIIEAFKGQVFALSTHPYGCRVIQRILEHCLPE 997
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L + + ++ ++ G+ + S +K+ SN
Sbjct: 998 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASN 1057
Query: 387 VVERCLLESGEEQSTRIIIE---LLRSPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E L P+ ++ M + NYV+Q + V++
Sbjct: 1058 VVEKCVTHASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMIDVAE 1110
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 137/273 (50%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 874 NYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRE 933
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + ++ + F+ L+TH G R +
Sbjct: 934 LDGHVLKCVKDQNGNHVVQKCIE-CVQPHALHFII----EAFKGQVFALSTHPYGCRVIQ 988
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P+Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 989 RILEHCL-PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVL 1047
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
G++ K V++ CV ++ A+R L+ E+ + +AL + +D Y NYVVQ ++
Sbjct: 1048 GLSQHKFASNVVEKCVTHASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMID 1107
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1108 VAEPTQRKIVMHKIRPHISTLRKYTYGKHILAK 1140
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ S + + + +E+ Y
Sbjct: 806 RLLEDFRNNRYPNLQLRDIAGHIMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAY 865
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 866 QLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 924
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ + ++R+L+GH + ++ G++VV++C +E + + IIE + V L HP+
Sbjct: 925 QVISEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPHALHFIIEAFKG-QVFALSTHPY 982
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 983 GCRVIQRIL 991
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 41/180 (22%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ +G + AL+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q +
Sbjct: 967 IEAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHV 1026
Query: 208 VELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA---------------- 242
+E E +++I+ L L+ F +V C+ TH RA
Sbjct: 1027 LEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCV-THASRAERAVLIDEVCSLTEGP 1085
Query: 243 ---------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1086 HSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHISTLRKYTYGKHILAKLEKYY 1145
>gi|350585831|ref|XP_003482060.1| PREDICTED: pumilio homolog 1 isoform 2 [Sus scrofa]
Length = 594
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 252 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 311
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 312 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 368
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 369 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 428
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 429 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 488
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLMHP--FGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 489 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 541
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 305 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE 364
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 365 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 419
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 420 RILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 478
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 479 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 538
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 539 VAEPAQRKIVMHKIRPHIATLRKYTYGKHILAK 571
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 237 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 296
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 297 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 355
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 356 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 413
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 414 GCRVIQRIL 422
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + AL+ YGCR +QR + ++ I E+ +L+
Sbjct: 395 QFIIDAF--------KGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ 446
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L+L+ F +V C+ TH R
Sbjct: 447 DQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAVL 505
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +V+ +RP TL K T G
Sbjct: 506 IDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYG 565
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 566 KHILAKLEKYY 576
>gi|410075265|ref|XP_003955215.1| hypothetical protein KAFR_0A06450 [Kazachstania africana CBS 2517]
gi|372461797|emb|CCF56080.1| hypothetical protein KAFR_0A06450 [Kazachstania africana CBS 2517]
Length = 493
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 151/300 (50%), Gaps = 16/300 (5%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
SS + + I+ LA D C+ LQ + L + EI++I+ + + L+++ +GNY +Q
Sbjct: 154 SSYKFDKNEIINLATDYQTCKILQSYLDKLNRHEIDVIYKIIEKDIIGLILNSYGNYFIQ 213
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL+ S E R +L + Q I + HG R + L++ + Q+ ++ +
Sbjct: 214 KLIISVSLENRVNLLKTIAG---QFNSIATDIHGTRVIQSLVDCVETIQEQEQIIKLIDN 270
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
+ D N +++IQ + F E + + NC I+ DK GCC++Q C++Y
Sbjct: 271 DLIQFCHDPNSNHIIQKILAKFDPEALIGIYQIMLQNCISISKDKFGCCIIQRCIDYGTS 330
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP----QITASLLRQLEGHYVSFSCN 381
Q L+ I+ NA L+ D YGNYV+Q+++ + + T +L L+G + S +
Sbjct: 331 NQVATLIGHIVKNAESLSFDAYGNYVIQYIIKMEQNIYSCKYTFDILNNLKGKLTTISNH 390
Query: 382 KYGSNVVERCLLESGEEQSTRIIIELLRSP-------NVSMLLMHPFGNYVIQSALLVSK 434
K+ SN++E LL + II E L ++++LL +GNYV+Q+AL S+
Sbjct: 391 KFSSNIIE--LLLKNPNVADVIIKEFLSYGAKGNTFNSINVLLNDKYGNYVLQTALASSR 448
>gi|323457211|gb|EGB13077.1| hypothetical protein AURANDRAFT_52010 [Aureococcus anophagefferens]
Length = 613
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 152/296 (51%), Gaps = 16/296 (5%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTM--SSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
S DL+G + L +DQ+G R LQ + + P E ++IF EV+ + EL D FGNYVV
Sbjct: 279 SATDLKGRVAVLCRDQHGSRFLQAHLEDTRAPSAERDLIFSEVLPKSRELATDVFGNYVV 338
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK++ + ++++ L V + L+ +G R V K L+ L P++ V+ R
Sbjct: 339 QKVLTCGDADTKSKVYEALKG---HCVALSLHVYGCRVVQKALDALP-PREALAVIDEFR 394
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFS-HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
+ D NG++VIQ C + + E ++L N +AT GC VLQ +E+
Sbjct: 395 ESVLLCVHDQNGNHVIQKCRDYAAFGESVDFVLAAFRGNARSLATHSYGCRVLQRVLEHC 454
Query: 324 KGAQRERLVAEI-IANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
L+ E+ +A+ L ED Y NYV+QH + A LL ++ + + FS +K
Sbjct: 455 GPEHTGPLLDELQLADLPPLIEDQYANYVMQHAIQYGRHSDKAKLLAAVKANLLDFSRHK 514
Query: 383 YGSNVVERCLLESGEEQSTRIIIELL------RSPN--VSMLLMHPFGNYVIQSAL 430
+ SNVVE+CL EE + I+ ++ SP + +L++ PF NYV+Q +
Sbjct: 515 FASNVVEKCLDFGSEETRSEIVDAVVDDVGADHSPTSALKLLIVDPFANYVVQKVV 570
>gi|426221803|ref|XP_004005096.1| PREDICTED: pumilio homolog 1 isoform 1 [Ovis aries]
Length = 1180
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 157/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 840 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 899
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 900 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRE-LDGHV 955
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 956 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 1015
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 1016 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1075
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1076 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1127
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 134/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 893 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELD 952
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 953 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 1007
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N +
Sbjct: 1008 LEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 1066
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 1067 SQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 1126
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1127 EPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1157
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 825 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 884
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 885 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 944
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 945 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 1002
Query: 425 VIQSAL 430
VIQ L
Sbjct: 1003 VIQRIL 1008
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + AL+ YGCR +QR + ++ I E+ +L+ D +GNYV+Q ++E
Sbjct: 987 FKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1046
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L+L+ F +V C+ TH R
Sbjct: 1047 GRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAVLIDEVCTMNDGPHSA 1105
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1106 LYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYY 1162
>gi|380488307|emb|CCF37468.1| hypothetical protein CH063_08789 [Colletotrichum higginsianum]
Length = 821
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 153/288 (53%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G++V + DQ+G R +Q+ + + +E + +F E+ +LM D FGNYV+QK
Sbjct: 430 LKDIYGHVVEFSGDQHGSRFIQQKLETANSDEKDQVFREIEPNAIQLMKDVFGNYVIQKF 489
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + ++V + + + R V K LE++ QQ LV L P
Sbjct: 490 FEHGNQVQKKVLASQMKG---KVVDLSMQMYACRVVQKALEHVLVEQQAELV-KELEPEI 545
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ + KD NG++V+Q ++ + ++++ +A C V+Q +EY
Sbjct: 546 LKVVKDQNGNHVVQKIIELVPRQYIDFVMDSFRGQVSQLAAHMYACRVIQRMLEYGTEQD 605
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+E ++AE+ ++ +L D YGNYVVQH++ + + +++ + V+ S +K+ SNV
Sbjct: 606 KETILAELHSSTQVLITDQYGNYVVQHIIEHGKSEDRSRIIQLVIAQLVTLSKHKFASNV 665
Query: 388 VERCLLESGEEQSTRIIIELLR-----SPNVSMLLMHPFGNYVIQSAL 430
VE+C+ E+ I +++ + ++ +++ +GNYVIQ L
Sbjct: 666 VEKCIQYGTAEERKGIREQIISHAADGTSSLQLMMKDQYGNYVIQKLL 713
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 47/228 (20%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G +V L+ Y CR +Q+ + + E+ + E+ + +++ D GN+VVQK++EL
Sbjct: 505 MKGKVVDLSMQMYACRVVQKALEHVLVEQQAELVKELEPEILKVVKDQNGNHVVQKIIEL 564
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
R I ++ + Q+ ++ + + R + ++LE T Q +LA L L
Sbjct: 565 VP---RQYIDFVMDSFRGQVSQLAAHMYACRVIQRMLEYGTE-QDKETILAELHSSTQVL 620
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLL----------------NEVADNC--YGIA----- 307
D G+YV+Q+ ++H ED ++ + V + C YG A
Sbjct: 621 ITDQYGNYVVQHIIEHGKSEDRSRIIQLVIAQLVTLSKHKFASNVVEKCIQYGTAEERKG 680
Query: 308 --------------------TDKSGCCVLQHCVEYSKGAQRERLVAEI 335
D+ G V+Q + +GA+RE V E+
Sbjct: 681 IREQIISHAADGTSSLQLMMKDQYGNYVIQKLLNQLEGAEREAFVEEM 728
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 263 LRPGAVTLTKDTN-GHYVIQYCVKHF---SHEDTKYLLNEVADNCYGIATDKSGCCVLQH 318
+RPG KD + G V ++ F S + +Y L ++ + + D+ G +Q
Sbjct: 398 VRPG-----KDQDPGKGVRSLLLEEFRSSSKSNKRYELKDIYGHVVEFSGDQHGSRFIQQ 452
Query: 319 CVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSF 378
+E + +++++ EI NA+ L +D +GNYV+Q L Q++G V
Sbjct: 453 KLETANSDEKDQVFREIEPNAIQLMKDVFGNYVIQKFFEHGNQVQKKVLASQMKGKVVDL 512
Query: 379 SCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQ 427
S Y VV++ L EQ ++ EL P + ++ GN+V+Q
Sbjct: 513 SMQMYACRVVQKALEHVLVEQQAELVKEL--EPEILKVVKDQNGNHVVQ 559
>gi|297282790|ref|XP_002802328.1| PREDICTED: pumilio homolog 1 [Macaca mulatta]
gi|332808253|ref|XP_003307983.1| PREDICTED: pumilio homolog 1 [Pan troglodytes]
gi|397515867|ref|XP_003828163.1| PREDICTED: pumilio homolog 1 isoform 4 [Pan paniscus]
gi|402853683|ref|XP_003891520.1| PREDICTED: pumilio homolog 1 isoform 3 [Papio anubis]
Length = 1127
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 157/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 787 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 846
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 847 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRE-LDGHV 902
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 903 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 962
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 963 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1022
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1023 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1074
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 134/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 840 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELD 899
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 900 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 954
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N +
Sbjct: 955 LEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 1013
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 1014 SQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 1073
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1074 EPGQRKIVMHKIRPHIATLRKYTYGKHILAK 1104
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 772 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 831
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 832 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 891
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 892 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 949
Query: 425 VIQSAL 430
VIQ L
Sbjct: 950 VIQRIL 955
>gi|16209558|gb|AAL14121.1| pumilio-like protein 1 [Xenopus laevis]
Length = 692
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 158/293 (53%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 350 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 409
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + QQ I+ ++ L
Sbjct: 410 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGH 466
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 467 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRVIQRILEHCLPE 526
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 527 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQDKFASN 586
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLMHP--FGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 587 VVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 639
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 137/273 (50%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 403 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRE 462
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 463 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKSQVFALSTHPYGCRVIQ 517
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P+Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 518 RILEHCL-PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 576
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ DK V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 577 VLSQDKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 636
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 637 VAEPAQRKIVMHKIRPHIATLRKYTYGKHILAK 669
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 4/188 (2%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 335 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 394
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--Q 362
+ D G V+Q E+ Q+ L I + L LA YG V+Q L P Q
Sbjct: 395 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQ 454
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFG 422
+ ++R+L+GH + ++ G++VV++C +E + QS + II+ +S V L HP+G
Sbjct: 455 VINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKS-QVFALSTHPYG 512
Query: 423 NYVIQSAL 430
VIQ L
Sbjct: 513 CRVIQRIL 520
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F + + AL+ YGCR +QR + E+ I E+ +L+
Sbjct: 493 QFIIDAF--------KSQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQ 544
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L+L+ D F +V C+ TH R
Sbjct: 545 DQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQDKFASNVVEKCV-THASRTERAML 603
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +V+ +RP TL K T G
Sbjct: 604 IDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYG 663
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 664 KHILAKLEKYY 674
>gi|403293276|ref|XP_003937646.1| PREDICTED: pumilio homolog 1 isoform 4 [Saimiri boliviensis
boliviensis]
Length = 1127
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 157/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 787 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 846
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 847 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRE-LDGHV 902
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 903 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 962
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 963 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1022
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1023 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1074
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 134/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 840 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELD 899
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 900 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 954
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N +
Sbjct: 955 LEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 1013
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 1014 SQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 1073
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1074 EPGQRKIVMHKIRPHIATLRKYTYGKHILAK 1104
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 772 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 831
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 832 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 891
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 892 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 949
Query: 425 VIQSAL 430
VIQ L
Sbjct: 950 VIQRIL 955
>gi|390465605|ref|XP_002750597.2| PREDICTED: pumilio homolog 1 isoform 1 [Callithrix jacchus]
Length = 1129
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 157/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 789 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 848
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 849 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRE-LDGHV 904
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 905 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 964
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 965 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1024
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1025 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1076
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 134/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 842 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELD 901
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 902 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 956
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N +
Sbjct: 957 LEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 1015
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 1016 SQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 1075
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1076 EPGQRKIVMHKIRPHIATLRKYTYGKHILAK 1106
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 774 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 833
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 834 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 893
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 894 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 951
Query: 425 VIQSAL 430
VIQ L
Sbjct: 952 VIQRIL 957
>gi|194377510|dbj|BAG57703.1| unnamed protein product [Homo sapiens]
Length = 1127
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 157/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 787 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 846
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 847 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRE-LDGHV 902
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 903 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 962
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 963 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1022
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1023 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1074
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 134/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 840 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELD 899
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 900 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 954
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N +
Sbjct: 955 LEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 1013
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 1014 SQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 1073
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1074 EPGQRKIVMHKIRPHIATLRKYTYGKHILAK 1104
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 772 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 831
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 832 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 891
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 892 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 949
Query: 425 VIQSAL 430
VIQ L
Sbjct: 950 VIQRIL 955
>gi|395526796|ref|XP_003765542.1| PREDICTED: pumilio homolog 1 isoform 3 [Sarcophilus harrisii]
Length = 946
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 156/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 606 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 665
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + QQ +V L
Sbjct: 666 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQNEMV-RELDGHV 721
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 722 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQ 781
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 782 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 841
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLMHP--FGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 842 VEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 893
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 135/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 659 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQNEMVRELD 718
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 719 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 773
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P+Q +L L L +D G+YVIQ+ ++H ED ++ E+ N +
Sbjct: 774 LEHCL-PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 832
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 833 SQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 892
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 893 EPAQRKIVMHKIRPHIATLRKYTYGKHILAK 923
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 591 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 650
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L P
Sbjct: 651 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQ 710
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 711 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 768
Query: 425 VIQSAL 430
VIQ L
Sbjct: 769 VIQRIL 774
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + AL+ YGCR +QR + E+ I E+ +L+
Sbjct: 747 QFIIDAF--------KGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQ 798
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L+L+ F +V C+ TH R
Sbjct: 799 DQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAML 857
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +V+ +RP TL K T G
Sbjct: 858 IDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYG 917
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 918 KHILAKLEKYY 928
>gi|449273163|gb|EMC82771.1| Pumilio like protein 1, partial [Columba livia]
Length = 987
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 156/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 680 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 739
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE P Q + ++ L
Sbjct: 740 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALE-FIPPDQQNEMVRELDGHV 795
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 796 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQ 855
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 856 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 915
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 916 VEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 967
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 133/264 (50%), Gaps = 28/264 (10%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 733 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQNEMVRELD 792
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 793 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 847
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P+Q +L L L +D G+YVIQ+ ++H ED ++ E+ N +
Sbjct: 848 LEHCL-PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 906
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NAL-LLAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 907 SQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 966
Query: 360 VPQITASLLRQLEGHYVSFSCNKY 383
P R++ H VS SC ++
Sbjct: 967 EP-----AQRKIVMHKVS-SCRRW 984
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 665 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 724
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L P
Sbjct: 725 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQ 784
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 785 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 842
Query: 425 VIQSAL 430
VIQ L
Sbjct: 843 VIQRIL 848
>gi|323337538|gb|EGA78783.1| Mpt5p [Saccharomyces cerevisiae Vin13]
Length = 777
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 165/325 (50%), Gaps = 46/325 (14%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEI--EMIFVEVIDRVCELMIDPFGNYVVQ 205
LRDL + + LA DQ+GCR LQ+ + + + + ++++ ++ +L++DPFGNY+VQ
Sbjct: 126 LRDL--DYIKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQ 183
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR- 264
KL + + EQ+T ++ + + FQ I +N +G R++ K+++ + N QI L++
Sbjct: 184 KLCDYLTAEQKTLLIQTIYPNVFQ---ISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQ 240
Query: 265 -----PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVAD--NCYGIATDKSGCCVLQ 317
VTL D NG++VIQ C+ FS ++++ + + N I+T K GCCVLQ
Sbjct: 241 EFTSIEQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQ 300
Query: 318 HCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ--ITASLLRQLEGHY 375
+ Q ++ +I+ L D +GNY++Q LL ++ + A L +L
Sbjct: 301 KLLSVCTLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFNRLSNEL 360
Query: 376 VSFSCNKYGSNVVERCLLE-------------SGEEQSTRI---------------IIEL 407
SC K+ SNVVE+ + + G Q T + I++
Sbjct: 361 CQLSCLKFSSNVVEKFIKKLFRIITGFIVNNNGGASQRTAVASDDVINASMNILLTTIDI 420
Query: 408 LRSPNVSMLLMHPFGNYVIQSALLV 432
+ N+++L+ FGNY +Q+ L V
Sbjct: 421 F-TVNLNVLIRDNFGNYALQTLLDV 444
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 101/222 (45%), Gaps = 12/222 (5%)
Query: 227 DFQLVRICLNTHGIRAVLKLLENLTNPQQI-SLVLAALRPGAVTLTKDTNGHYVIQYCVK 285
D +++ + G R + K LE + + L+ ++P + L D G+Y++Q
Sbjct: 128 DLDYIKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQKLCD 187
Query: 286 HFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAE-------IIAN 338
+ + E L+ + N + I+ ++ G LQ ++ + L+ + I
Sbjct: 188 YLTAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQ 247
Query: 339 ALLLAEDCYGNYVVQHLLALRVPQITASLLRQL--EGHYVSFSCNKYGSNVVERCLLESG 396
+ L D GN+V+Q + P ++ + + + ++ S +K+G V+++ L
Sbjct: 248 VVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVCT 307
Query: 397 EEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLF 438
+Q +I +++++ + L+ FGNY+IQ L + ++ +
Sbjct: 308 LQQIFKISVKIVQF--LPGLINDQFGNYIIQFLLDIKELDFY 347
>gi|123454731|ref|XP_001315116.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
gi|121897783|gb|EAY02893.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
Length = 410
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 143/281 (50%), Gaps = 10/281 (3%)
Query: 156 VALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQ 215
V +AKD+ C LQ + E + IF + + +L+ D N+++QKL E +EEQ
Sbjct: 92 VKMAKDRQDCIMLQEQIDHATPAERDTIFNVLYPHMGDLVCDGAANFLIQKLCEYLNEEQ 151
Query: 216 RTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTN 275
+TR+L D + RI + +G R + K +E+ T+P I + AL P V L N
Sbjct: 152 QTRMLAFFMED---VQRIVDHPNGCRVLQKFIESTTSPSNIDPIFLALLPRFVELCSSQN 208
Query: 276 GHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEI 335
G+++ Q + ++N++ + Y + D GC V+Q + + LV E+
Sbjct: 209 GNHIAQRFIIKIPQR-VPDIINKIKTHVYDLVVDNWGCRVIQQLFDRLPIQELIPLVDEV 267
Query: 336 IANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLES 395
+ A LA + +GNYVVQ++L P+ +L+ GH+ FS +K+ SNV+E+C+ ++
Sbjct: 268 LCRAETLATNQFGNYVVQNILNSGTPEHIQALIDAFTGHFYEFSMHKFASNVIEKCIRKA 327
Query: 396 GEEQSTRIIIELL------RSPNVSMLLMHPFGNYVIQSAL 430
+Q I E++ P + ++ FGNYVIQ +
Sbjct: 328 NPQQQNMIFTEIIGPEGNYNRPRIKEMVSDQFGNYVIQRII 368
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 17/245 (6%)
Query: 164 GCRHLQRTM-SSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLM 222
GCR LQ+ + S+ I+ IF+ ++ R EL GN++ Q+ + + R+ +
Sbjct: 172 GCRVLQKFIESTTSPSNIDPIFLALLPRFVELCSSQNGNHIAQRFIIKIPQ----RVPDI 227
Query: 223 LTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQY 282
+ + + ++ G R + +L + L + I LV L A TL + G+YV+Q
Sbjct: 228 INKIKTHVYDLVVDNWGCRVIQQLFDRLPIQELIPLVDEVLC-RAETLATNQFGNYVVQN 286
Query: 283 CVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA----- 337
+ + E + L++ + Y + K V++ C+ + Q+ + EII
Sbjct: 287 ILNSGTPEHIQALIDAFTGHFYEFSMHKFASNVIEKCIRKANPQQQNMIFTEIIGPEGNY 346
Query: 338 ---NALLLAEDCYGNYVVQHLLALRV-PQITASLLRQLEGHYVSFSCNKYGSNVVERCLL 393
+ D +GNYV+Q ++ Q L + + F C+ Y +V+ CL
Sbjct: 347 NRPRIKEMVSDQFGNYVIQRIIEFGTESQQNIIYLVTYDNYNFLFKCS-YAKHVIS-CLT 404
Query: 394 ESGEE 398
G E
Sbjct: 405 NLGYE 409
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ ++ ++ L D +GCR +Q+ LP +E+ + EV+ R L + FGNYVVQ +
Sbjct: 228 INKIKTHVYDLVVDNWGCRVIQQLFDRLPIQELIPLVDEVLCRAETLATNQFGNYVVQNI 287
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL---- 263
+ + E ++ T ++ ++ I ++ NPQQ +++ +
Sbjct: 288 LNSGTPEHIQALIDAFTGHFYEFSMHKFASNVIEKCIR----KANPQQQNMIFTEIIGPE 343
Query: 264 ----RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
RP + D G+YVIQ ++ F E + ++ V + Y
Sbjct: 344 GNYNRPRIKEMVSDQFGNYVIQRIIE-FGTESQQNIIYLVTYDNY 387
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVID--------RVCELMIDPFGNY 202
G+ + ++ +++ + ++ MIF E+I R+ E++ D FGNY
Sbjct: 303 FTGHFYEFSMHKFASNVIEKCIRKANPQQQNMIFTEIIGPEGNYNRPRIKEMVSDQFGNY 362
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRIC 234
V+Q+++E +E Q+ I+ ++T D++ + C
Sbjct: 363 VIQRIIEFGTESQQN-IIYLVTYDNYNFLFKC 393
>gi|334329173|ref|XP_003341194.1| PREDICTED: pumilio homolog 1 isoform 3 [Monodelphis domestica]
Length = 946
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 156/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 606 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 665
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + QQ +V L
Sbjct: 666 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQNEMV-RELDGHV 721
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 722 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQ 781
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 782 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 841
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLMHP--FGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 842 VEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 893
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 135/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 659 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQNEMVRELD 718
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 719 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 773
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P+Q +L L L +D G+YVIQ+ ++H ED ++ E+ N +
Sbjct: 774 LEHCL-PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 832
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 833 SQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 892
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 893 EPAQRKIVMHKIRPHIATLRKYTYGKHILAK 923
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 591 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 650
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L P
Sbjct: 651 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQ 710
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 711 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 768
Query: 425 VIQSAL 430
VIQ L
Sbjct: 769 VIQRIL 774
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + AL+ YGCR +QR + E+ I E+ +L+
Sbjct: 747 QFIIDAF--------KGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQ 798
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L+L+ F +V C+ TH R
Sbjct: 799 DQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAML 857
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +V+ +RP TL K T G
Sbjct: 858 IDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYG 917
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 918 KHILAKLEKYY 928
>gi|794145|emb|CAA58660.1| MPT5=HTR1 [Saccharomyces cerevisiae]
Length = 812
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 165/325 (50%), Gaps = 46/325 (14%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEI--EMIFVEVIDRVCELMIDPFGNYVVQ 205
LRDL + + LA DQ+GCR LQ+ + + + + ++++ ++ +L++DPFGNY+VQ
Sbjct: 210 LRDL--DYIKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQ 267
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR- 264
KL + + EQ+T ++ + + FQ I +N +G R++ K+++ + N QI L++
Sbjct: 268 KLCDYLTAEQKTLLIQTIYPNVFQ---ISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQ 324
Query: 265 -----PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVAD--NCYGIATDKSGCCVLQ 317
VTL D NG++VIQ C+ FS ++++ + + N I+T K GCCVLQ
Sbjct: 325 EFTSIEQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQ 384
Query: 318 HCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ--ITASLLRQLEGHY 375
+ Q ++ +I+ L D +GNY++Q LL ++ + A L +L
Sbjct: 385 KLLSVCTLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFNRLSNEL 444
Query: 376 VSFSCNKYGSNVVERCLLE-------------SGEEQSTRI---------------IIEL 407
SC K+ SNVVE+ + + G Q T + I++
Sbjct: 445 CQLSCLKFSSNVVEKFIKKLFRIITGFIVNNNGGASQRTAVASDDVINASMNILLTTIDI 504
Query: 408 LRSPNVSMLLMHPFGNYVIQSALLV 432
+ N+++L+ FGNY +Q+ L V
Sbjct: 505 F-TVNLNVLIRDNFGNYALQTLLDV 528
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 101/222 (45%), Gaps = 12/222 (5%)
Query: 227 DFQLVRICLNTHGIRAVLKLLENLTNPQQI-SLVLAALRPGAVTLTKDTNGHYVIQYCVK 285
D +++ + G R + K LE + + L+ ++P + L D G+Y++Q
Sbjct: 212 DLDYIKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQKLCD 271
Query: 286 HFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAE-------IIAN 338
+ + E L+ + N + I+ ++ G LQ ++ + L+ + I
Sbjct: 272 YLTAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQ 331
Query: 339 ALLLAEDCYGNYVVQHLLALRVPQITASLLRQL--EGHYVSFSCNKYGSNVVERCLLESG 396
+ L D GN+V+Q + P ++ + + + ++ S +K+G V+++ L
Sbjct: 332 VVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVCT 391
Query: 397 EEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLF 438
+Q +I +++++ + L+ FGNY+IQ L + ++ +
Sbjct: 392 LQQIFKISVKIVQF--LPGLINDQFGNYIIQFLLDIKELDFY 431
>gi|450490|dbj|BAA05172.1| suppressor protein [Saccharomyces cerevisiae]
gi|469512|dbj|BAA05024.1| HTR1 [Saccharomyces cerevisiae]
gi|1209471|emb|CAA58663.1| bic834 [Saccharomyces cerevisiae]
gi|392299572|gb|EIW10666.1| Mpt5p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 834
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 165/325 (50%), Gaps = 46/325 (14%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEI--EMIFVEVIDRVCELMIDPFGNYVVQ 205
LRDL + + LA DQ+GCR LQ+ + + + + ++++ ++ +L++DPFGNY+VQ
Sbjct: 185 LRDL--DYIKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQ 242
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR- 264
KL + + EQ+T ++ + + FQ I +N +G R++ K+++ + N QI L++
Sbjct: 243 KLCDYLTAEQKTLLIQTIYPNVFQ---ISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQ 299
Query: 265 -----PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVAD--NCYGIATDKSGCCVLQ 317
VTL D NG++VIQ C+ FS ++++ + + N I+T K GCCVLQ
Sbjct: 300 EFTSIEQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQ 359
Query: 318 HCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ--ITASLLRQLEGHY 375
+ Q ++ +I+ L D +GNY++Q LL ++ + A L +L
Sbjct: 360 KLLSVCTLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFNRLSNEL 419
Query: 376 VSFSCNKYGSNVVERCLLE-------------SGEEQSTRI---------------IIEL 407
SC K+ SNVVE+ + + G Q T + I++
Sbjct: 420 CQLSCLKFSSNVVEKFIKKLFRIITGFIVNNNGGASQRTAVASDDVINASMNILLTTIDI 479
Query: 408 LRSPNVSMLLMHPFGNYVIQSALLV 432
+ N+++L+ FGNY +Q+ L V
Sbjct: 480 F-TVNLNVLIRDNFGNYALQTLLDV 503
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 101/222 (45%), Gaps = 12/222 (5%)
Query: 227 DFQLVRICLNTHGIRAVLKLLENLTNPQQI-SLVLAALRPGAVTLTKDTNGHYVIQYCVK 285
D +++ + G R + K LE + + L+ ++P + L D G+Y++Q
Sbjct: 187 DLDYIKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQKLCD 246
Query: 286 HFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAE-------IIAN 338
+ + E L+ + N + I+ ++ G LQ ++ + L+ + I
Sbjct: 247 YLTAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQ 306
Query: 339 ALLLAEDCYGNYVVQHLLALRVPQITASLLRQL--EGHYVSFSCNKYGSNVVERCLLESG 396
+ L D GN+V+Q + P ++ + + + ++ S +K+G V+++ L
Sbjct: 307 VVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVCT 366
Query: 397 EEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLF 438
+Q +I +++++ + L+ FGNY+IQ L + ++ +
Sbjct: 367 LQQIFKISVKIVQF--LPGLINDQFGNYIIQFLLDIKELDFY 406
>gi|190407120|gb|EDV10387.1| suppressor protein MPT5 [Saccharomyces cerevisiae RM11-1a]
Length = 834
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 165/325 (50%), Gaps = 46/325 (14%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEI--EMIFVEVIDRVCELMIDPFGNYVVQ 205
LRDL + + LA DQ+GCR LQ+ + + + + ++++ ++ +L++DPFGNY+VQ
Sbjct: 185 LRDL--DYIKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQ 242
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR- 264
KL + + EQ+T ++ + + FQ I +N +G R++ K+++ + N QI L++
Sbjct: 243 KLCDYLTAEQKTLLIQTIYPNVFQ---ISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQ 299
Query: 265 -----PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVAD--NCYGIATDKSGCCVLQ 317
VTL D NG++VIQ C+ FS ++++ + + N I+T K GCCVLQ
Sbjct: 300 EFTSIEQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQ 359
Query: 318 HCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ--ITASLLRQLEGHY 375
+ Q ++ +I+ L D +GNY++Q LL ++ + A L +L
Sbjct: 360 KLLSVCTLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFNRLSNEL 419
Query: 376 VSFSCNKYGSNVVERCLLE-------------SGEEQSTRI---------------IIEL 407
SC K+ SNVVE+ + + G Q T + I++
Sbjct: 420 CQLSCLKFSSNVVEKFIKKLFRIITGFIVNNNGGASQRTAVASDDVINASMNILLTTIDI 479
Query: 408 LRSPNVSMLLMHPFGNYVIQSALLV 432
+ N+++L+ FGNY +Q+ L V
Sbjct: 480 F-TVNLNVLIRDNFGNYALQTLLDV 503
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 101/222 (45%), Gaps = 12/222 (5%)
Query: 227 DFQLVRICLNTHGIRAVLKLLENLTNPQQI-SLVLAALRPGAVTLTKDTNGHYVIQYCVK 285
D +++ + G R + K LE + + L+ ++P + L D G+Y++Q
Sbjct: 187 DLDYIKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQKLCD 246
Query: 286 HFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAE-------IIAN 338
+ + E L+ + N + I+ ++ G LQ ++ + L+ + I
Sbjct: 247 YLTAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQ 306
Query: 339 ALLLAEDCYGNYVVQHLLALRVPQITASLLRQL--EGHYVSFSCNKYGSNVVERCLLESG 396
+ L D GN+V+Q + P ++ + + + ++ S +K+G V+++ L
Sbjct: 307 VVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVCT 366
Query: 397 EEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLF 438
+Q +I +++++ + L+ FGNY+IQ L + ++ +
Sbjct: 367 LQQIFKISVKIVQF--LPGLINDQFGNYIIQFLLDIKELDFY 406
>gi|336469407|gb|EGO57569.1| hypothetical protein NEUTE1DRAFT_121965 [Neurospora tetrasperma
FGSC 2508]
gi|350290954|gb|EGZ72168.1| ARM repeat-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 824
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 148/298 (49%), Gaps = 23/298 (7%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+ + G+I A D+ G R +Q + S EE ++ E+++ + LM D +GNYVVQK
Sbjct: 381 LKQIYGSIADFAADRAGSRFIQDKLQSASSEEKAEVWRELMEELMPLMTDVYGNYVVQKF 440
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++EQ+T + ++ + ++R+ N +G R V K L+N+ Q+ LV L+
Sbjct: 441 FEHGTQEQKTSMASIIKKN---MLRLSENKYGCRVVQKALDNIFRRYQVELV-NELKDHV 496
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV--ADNCYGIATDKSGCCVLQHCVEYSKG 325
L K G++VIQ +K ++ ++ + +A ++ C V+Q +E+
Sbjct: 497 DKLNKSQEGNHVIQMIIKLLPRDEIGFIYDSFRGPGKVMELALNQYACRVIQRALEHGNE 556
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
R LV+E+ A L D YGNYV QH++ P+ A ++ + ++ S +K+ S
Sbjct: 557 EDRLYLVSELHKGAHTLITDAYGNYVAQHIIEAGKPEDRARMIAAVMSQTITLSTHKHAS 616
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPN----------------VSMLLMHPFGNYVIQ 427
NVVE+C + G + R I ++ SP + L++ F NYVIQ
Sbjct: 617 NVVEKC-INYGTPEDVRRIRDMFFSPQDGVGGYSSDHQSPDSFLRFLMLDHFANYVIQ 673
>gi|307102758|gb|EFN51026.1| hypothetical protein CHLNCDRAFT_28462 [Chlorella variabilis]
Length = 393
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 160/295 (54%), Gaps = 11/295 (3%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+S ++LRG + +DQ+G R +Q+ + + EE+ +F EV ++ LM+D FGNYVVQ
Sbjct: 8 ASPQELRGQLYPFCRDQHGSRLVQQQLETAAPEELTALFGEVRHKLLPLMVDVFGNYVVQ 67
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
+ +E E + + + L L +G R V K LE L Q++S + L
Sbjct: 68 RFLERGGAEVQAAVAEAIRGKALPL---SLQMYGCRVVQKALEVLPQQQRVS-ICRELTE 123
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHED-TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+ +D NG++V+Q C++ + ++ + + ++T GC ++Q +E+
Sbjct: 124 HTLRCVRDQNGNHVVQKCIECVQPSGPARDMIEIIVNKGQALSTHTFGCRLVQRVLEFCS 183
Query: 325 GAQ-RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
A+ RE+++++++ + L L+ D YGNYVVQHL+A S++ ++ ++ + +KY
Sbjct: 184 IAELREKVISDVLDSTLQLSHDQYGNYVVQHLVAKGPGPARESIVAKVAPQVMTLAQHKY 243
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPN-----VSMLLMHPFGNYVIQSALLVS 433
SNVVE CL SG+ I+ +++R ++ L+ +GNYV+Q AL V+
Sbjct: 244 ASNVVEACLKHSGQAHRDAIVDQMIRESGARPAALTALMRDQYGNYVVQRALEVA 298
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 121/249 (48%), Gaps = 13/249 (5%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG + L+ YGCR +Q+ + LP+++ I E+ + + D GN+VVQK +E
Sbjct: 85 IRGKALPLSLQMYGCRVVQKALEVLPQQQRVSICRELTEHTLRCVRDQNGNHVVQKCIEC 144
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
R ++ + + Q L+TH G R V ++LE + + V++ + +
Sbjct: 145 VQPSGPARDMIEIIVNKGQ----ALSTHTFGCRLVQRVLEFCSIAELREKVISDVLDSTL 200
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L+ D G+YV+Q+ V + ++ +VA +A K V++ C+++S A R
Sbjct: 201 QLSHDQYGNYVVQHLVAKGPGPARESIVAKVAPQVMTLAQHKYASNVVEACLKHSGQAHR 260
Query: 329 ERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
+ +V ++I A L D YGNYVVQ L + P A+LL ++ H +
Sbjct: 261 DAIVDQMIRESGARPAALTALMRDQYGNYVVQRALEVATPPQRAALLAAIKPHLDALKKY 320
Query: 382 KYGSNVVER 390
YG ++V +
Sbjct: 321 TYGKHIVTK 329
>gi|259146333|emb|CAY79590.1| Mpt5p [Saccharomyces cerevisiae EC1118]
gi|349578055|dbj|GAA23221.1| K7_Mpt5p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 859
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 165/325 (50%), Gaps = 46/325 (14%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEI--EMIFVEVIDRVCELMIDPFGNYVVQ 205
LRDL + + LA DQ+GCR LQ+ + + + + ++++ ++ +L++DPFGNY+VQ
Sbjct: 210 LRDL--DYIKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQ 267
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR- 264
KL + + EQ+T ++ + + FQ I +N +G R++ K+++ + N QI L++
Sbjct: 268 KLCDYLTAEQKTLLIQTIYPNVFQ---ISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQ 324
Query: 265 -----PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVAD--NCYGIATDKSGCCVLQ 317
VTL D NG++VIQ C+ FS ++++ + + N I+T K GCCVLQ
Sbjct: 325 EFTSIEQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQ 384
Query: 318 HCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ--ITASLLRQLEGHY 375
+ Q ++ +I+ L D +GNY++Q LL ++ + A L +L
Sbjct: 385 KLLSVCTLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFNRLSNEL 444
Query: 376 VSFSCNKYGSNVVERCLLE-------------SGEEQSTRI---------------IIEL 407
SC K+ SNVVE+ + + G Q T + I++
Sbjct: 445 CQLSCLKFSSNVVEKFIKKLFRIITGFIVNNNGGASQRTAVASDDVINASMNILLTTIDI 504
Query: 408 LRSPNVSMLLMHPFGNYVIQSALLV 432
+ N+++L+ FGNY +Q+ L V
Sbjct: 505 F-TVNLNVLIRDNFGNYALQTLLDV 528
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 101/222 (45%), Gaps = 12/222 (5%)
Query: 227 DFQLVRICLNTHGIRAVLKLLENLTNPQQI-SLVLAALRPGAVTLTKDTNGHYVIQYCVK 285
D +++ + G R + K LE + + L+ ++P + L D G+Y++Q
Sbjct: 212 DLDYIKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQKLCD 271
Query: 286 HFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAE-------IIAN 338
+ + E L+ + N + I+ ++ G LQ ++ + L+ + I
Sbjct: 272 YLTAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQ 331
Query: 339 ALLLAEDCYGNYVVQHLLALRVPQITASLLRQL--EGHYVSFSCNKYGSNVVERCLLESG 396
+ L D GN+V+Q + P ++ + + + ++ S +K+G V+++ L
Sbjct: 332 VVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVCT 391
Query: 397 EEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLF 438
+Q +I +++++ + L+ FGNY+IQ L + ++ +
Sbjct: 392 LQQIFKISVKIVQF--LPGLINDQFGNYIIQFLLDIKELDFY 431
>gi|6321260|ref|NP_011337.1| Mpt5p [Saccharomyces cerevisiae S288c]
gi|116242633|sp|P39016.2|MPT5_YEAST RecName: Full=Suppressor protein MPT5; AltName: Full=Protein HTR1;
AltName: Full=Pumilio homology domain family member 5
gi|1322786|emb|CAA96889.1| MPT5 [Saccharomyces cerevisiae]
gi|285812036|tpg|DAA07936.1| TPA: Mpt5p [Saccharomyces cerevisiae S288c]
Length = 859
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 165/325 (50%), Gaps = 46/325 (14%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEI--EMIFVEVIDRVCELMIDPFGNYVVQ 205
LRDL + + LA DQ+GCR LQ+ + + + + ++++ ++ +L++DPFGNY+VQ
Sbjct: 210 LRDL--DYIKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQ 267
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR- 264
KL + + EQ+T ++ + + FQ I +N +G R++ K+++ + N QI L++
Sbjct: 268 KLCDYLTAEQKTLLIQTIYPNVFQ---ISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQ 324
Query: 265 -----PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVAD--NCYGIATDKSGCCVLQ 317
VTL D NG++VIQ C+ FS ++++ + + N I+T K GCCVLQ
Sbjct: 325 EFTSIEQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQ 384
Query: 318 HCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ--ITASLLRQLEGHY 375
+ Q ++ +I+ L D +GNY++Q LL ++ + A L +L
Sbjct: 385 KLLSVCTLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFNRLSNEL 444
Query: 376 VSFSCNKYGSNVVERCLLE-------------SGEEQSTRI---------------IIEL 407
SC K+ SNVVE+ + + G Q T + I++
Sbjct: 445 CQLSCLKFSSNVVEKFIKKLFRIITGFIVNNNGGASQRTAVASDDVINASMNILLTTIDI 504
Query: 408 LRSPNVSMLLMHPFGNYVIQSALLV 432
+ N+++L+ FGNY +Q+ L V
Sbjct: 505 F-TVNLNVLIRDNFGNYALQTLLDV 528
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 101/222 (45%), Gaps = 12/222 (5%)
Query: 227 DFQLVRICLNTHGIRAVLKLLENLTNPQQI-SLVLAALRPGAVTLTKDTNGHYVIQYCVK 285
D +++ + G R + K LE + + L+ ++P + L D G+Y++Q
Sbjct: 212 DLDYIKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQKLCD 271
Query: 286 HFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAE-------IIAN 338
+ + E L+ + N + I+ ++ G LQ ++ + L+ + I
Sbjct: 272 YLTAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQ 331
Query: 339 ALLLAEDCYGNYVVQHLLALRVPQITASLLRQL--EGHYVSFSCNKYGSNVVERCLLESG 396
+ L D GN+V+Q + P ++ + + + ++ S +K+G V+++ L
Sbjct: 332 VVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVCT 391
Query: 397 EEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLF 438
+Q +I +++++ + L+ FGNY+IQ L + ++ +
Sbjct: 392 LQQIFKISVKIVQF--LPGLINDQFGNYIIQFLLDIKELDFY 431
>gi|378730303|gb|EHY56762.1| hypothetical protein HMPREF1120_04829 [Exophiala dermatitidis
NIH/UT8656]
Length = 907
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 155/288 (53%), Gaps = 12/288 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ ++V + DQ+ R +Q + + +E E IF E+ V +LM D FGNYV+QKL
Sbjct: 541 LKDIYNHVVEFSGDQHASRFIQLKLETANSDEKEQIFKEIQPNVLQLMTDVFGNYVIQKL 600
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + ++++ + +G R V K +++ QQ SLV P
Sbjct: 601 FEHGNQAQKKALANQMKG---HVLQLSMQMYGCRVVQKAFDHVLTDQQASLVKELDGPNQ 657
Query: 268 --VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
+ + KD NG++V+Q ++ E +++++ ++T + GC V+Q +E+ +
Sbjct: 658 QILKVVKDNNGNHVVQKAIERIPGEHIQFIVDAHRGQMLKMSTHQYGCRVVQRMLEHCRP 717
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
+ ++ E++ + L L D +GNYVVQH++ P ++ + H ++FS +K+ S
Sbjct: 718 EAKRAILDELLEHTLPLISDSFGNYVVQHIIQNGEPHDRRRVVDVVLQHVLAFSKHKFAS 777
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQ 427
N+VE+ + + +Q ++ I+ L +P+ V L+ +GNYV+Q
Sbjct: 778 NIVEKSIEHADADQRSQ-ILHTLTAPDEQGNTPVFGLMKDQYGNYVLQ 824
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
++ L ++ ++ + D+ +Q +E + ++E++ EI N L L D +GNYV+
Sbjct: 538 RFELKDIYNHVVEFSGDQHASRFIQLKLETANSDEKEQIFKEIQPNVLQLMTDVFGNYVI 597
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q L +L Q++GH + S YG VV++ +Q ++ E L PN
Sbjct: 598 QKLFEHGNQAQKKALANQMKGHVLQLSMQMYGCRVVQKAFDHVLTDQQASLVKE-LDGPN 656
Query: 413 VSML--LMHPFGNYVIQSAL 430
+L + GN+V+Q A+
Sbjct: 657 QQILKVVKDNNGNHVVQKAI 676
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 107/249 (42%), Gaps = 52/249 (20%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVID----RVCELMIDPFGNYVVQK 206
++G+++ L+ YGCR +Q+ + ++ + V+ +D ++ +++ D GN+VVQK
Sbjct: 616 MKGHVLQLSMQMYGCRVVQKAFDHVLTDQ-QASLVKELDGPNQQILKVVKDNNGNHVVQK 674
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
+E E I ++ Q++++ + +G R V ++LE+ P+ +L L
Sbjct: 675 AIERIPGEH---IQFIVDAHRGQMLKMSTHQYGCRVVQRMLEHC-RPEAKRAILDELLEH 730
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV-------------------------AD 301
+ L D+ G+YV+Q+ +++ D + +++ V AD
Sbjct: 731 TLPLISDSFGNYVVQHIIQNGEPHDRRRVVDVVLQHVLAFSKHKFASNIVEKSIEHADAD 790
Query: 302 N------------------CYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLA 343
+G+ D+ G VLQ + +GA+ L ++ N L
Sbjct: 791 QRSQILHTLTAPDEQGNTPVFGLMKDQYGNYVLQKVHDQLQGAELSALREDMKRNFPALR 850
Query: 344 EDCYGNYVV 352
YG V+
Sbjct: 851 RTSYGKQVM 859
>gi|151943637|gb|EDN61947.1| multicopy suppressor of pop two [Saccharomyces cerevisiae YJM789]
Length = 859
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 165/325 (50%), Gaps = 46/325 (14%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEI--EMIFVEVIDRVCELMIDPFGNYVVQ 205
LRDL + + LA DQ+GCR LQ+ + + + + ++++ ++ +L++DPFGNY+VQ
Sbjct: 210 LRDL--DYIKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQ 267
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR- 264
KL + + EQ+T ++ + + FQ I +N +G R++ K+++ + N QI L++
Sbjct: 268 KLCDYLTAEQKTLLIQTIYPNVFQ---ISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQ 324
Query: 265 -----PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVAD--NCYGIATDKSGCCVLQ 317
VTL D NG++VIQ C+ FS ++++ + + N I+T K GCCVLQ
Sbjct: 325 EFTSIEQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQ 384
Query: 318 HCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ--ITASLLRQLEGHY 375
+ Q ++ +I+ L D +GNY++Q LL ++ + A L +L
Sbjct: 385 KLLSVCTLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFNRLSNEL 444
Query: 376 VSFSCNKYGSNVVERCLLE-------------SGEEQSTRI---------------IIEL 407
SC K+ SNVVE+ + + G Q T + I++
Sbjct: 445 CQLSCLKFSSNVVEKFIKKLFRIITGFIVNNNGGASQRTAVASDDVINASMNILLTTIDI 504
Query: 408 LRSPNVSMLLMHPFGNYVIQSALLV 432
+ N+++L+ FGNY +Q+ L V
Sbjct: 505 F-TVNLNVLIRDNFGNYALQTLLDV 528
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 101/222 (45%), Gaps = 12/222 (5%)
Query: 227 DFQLVRICLNTHGIRAVLKLLENLTNPQQI-SLVLAALRPGAVTLTKDTNGHYVIQYCVK 285
D +++ + G R + K LE + + L+ ++P + L D G+Y++Q
Sbjct: 212 DLDYIKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQKLCD 271
Query: 286 HFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAE-------IIAN 338
+ + E L+ + N + I+ ++ G LQ ++ + L+ + I
Sbjct: 272 YLTAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQ 331
Query: 339 ALLLAEDCYGNYVVQHLLALRVPQITASLLRQL--EGHYVSFSCNKYGSNVVERCLLESG 396
+ L D GN+V+Q + P ++ + + + ++ S +K+G V+++ L
Sbjct: 332 VVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVCT 391
Query: 397 EEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLF 438
+Q +I +++++ + L+ FGNY+IQ L + ++ +
Sbjct: 392 LQQIFKISVKIVQF--LPGLINDQFGNYIIQFLLDIKELDFY 431
>gi|338721822|ref|XP_001916930.2| PREDICTED: pumilio homolog 1 [Equus caballus]
Length = 1163
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 156/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 823 LREIAGHIMEFSQDQHGSRFIQLKLERATPTERQLVFNEILQAAYQLMVDVFGNYVIQKF 882
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + QQ +V L
Sbjct: 883 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPADQQNEMVRE-LDGHV 938
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 939 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 998
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 999 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1058
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1059 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1110
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 134/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 876 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPADQQNEMVRELD 935
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 936 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 990
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N +
Sbjct: 991 LEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 1049
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 1050 SQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 1109
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1110 EPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1140
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 808 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPTERQLVFNEILQAAY 867
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 868 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPADQQ 927
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 928 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 985
Query: 425 VIQSAL 430
VIQ L
Sbjct: 986 VIQRIL 991
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + AL+ YGCR +QR + ++ I E+ +L+ D +GNYV+Q ++E
Sbjct: 970 FKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1029
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L+L+ F +V C+ TH R
Sbjct: 1030 GRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAVLIDEVCTMNDGPHSA 1088
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1089 LYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYY 1145
>gi|261872057|gb|ACY02862.1| pumilio 1, partial [Oryzias latipes]
Length = 1162
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 155/293 (52%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRD+ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 820 LRDIAGHIMEFSQDQHGSRFIQLKLERASVAERQLVFSEILQAAYQLMVDVFGNYVIQKF 879
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S +Q+ L + ++ + L +G R + K LE + + QQ IS ++ L
Sbjct: 880 FEFGSLDQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGH 936
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ +++ + ++T GC V+Q +E+
Sbjct: 937 VLKCVKDQNGNHVVQKCIECVQPHALHFIIEAFKGQVFALSTHPYGCRVIQRILEHCLPE 996
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L + + ++ ++ G+ + S +K+ SN
Sbjct: 997 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASN 1056
Query: 387 VVERCLLESGEEQSTRIIIE---LLRSPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E L P+ ++ M + NYV+Q + V++
Sbjct: 1057 VVEKCVTHASRTERAMLIDEVCGLTEGPHSALYTMMKDQYANYVVQKMIDVAE 1109
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 873 NYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRE 932
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + ++ + F+ L+TH G R +
Sbjct: 933 LDGHVLKCVKDQNGNHVVQKCIE-CVQPHALHFII----EAFKGQVFALSTHPYGCRVIQ 987
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P+Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 988 RILEHCL-PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVL 1046
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
G++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 1047 GLSQHKFASNVVEKCVTHASRTERAMLIDEVCGLTEGPHSALYTMMKDQYANYVVQKMID 1106
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1107 VAEPTQRKIVMHKIRPHISTLRKYTYGKHILAK 1139
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ S + + + +E+ Y
Sbjct: 805 RLLEDFRNNRYPNLQLRDIAGHIMEFSQDQHGSRFIQLKLERASVAERQLVFSEILQAAY 864
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 865 QLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 923
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ + ++R+L+GH + ++ G++VV++C +E + + IIE + V L HP+
Sbjct: 924 QVISEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPHALHFIIEAFKG-QVFALSTHPY 981
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 982 GCRVIQRIL 990
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 41/180 (22%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ +G + AL+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q +
Sbjct: 966 IEAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHV 1025
Query: 208 VELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA---------------- 242
+E E +++I+ L L+ F +V C+ TH R
Sbjct: 1026 LEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCV-THASRTERAMLIDEVCGLTEGP 1084
Query: 243 ---------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1085 HSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHISTLRKYTYGKHILAKLEKYY 1144
>gi|207345480|gb|EDZ72291.1| YGL178Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 746
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 165/325 (50%), Gaps = 46/325 (14%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEI--EMIFVEVIDRVCELMIDPFGNYVVQ 205
LRDL + + LA DQ+GCR LQ+ + + + + ++++ ++ +L++DPFGNY+VQ
Sbjct: 97 LRDL--DYIKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQ 154
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR- 264
KL + + EQ+T ++ + + FQ I +N +G R++ K+++ + N QI L++
Sbjct: 155 KLCDYLTAEQKTLLIQTIYPNVFQ---ISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQ 211
Query: 265 -----PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVAD--NCYGIATDKSGCCVLQ 317
VTL D NG++VIQ C+ FS ++++ + + N I+T K GCCVLQ
Sbjct: 212 EFTSIEQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQ 271
Query: 318 HCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ--ITASLLRQLEGHY 375
+ Q ++ +I+ L D +GNY++Q LL ++ + A L +L
Sbjct: 272 KLLSVCTLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFNRLSNEL 331
Query: 376 VSFSCNKYGSNVVERCLLE-------------SGEEQSTRI---------------IIEL 407
SC K+ SNVVE+ + + G Q T + I++
Sbjct: 332 CQLSCLKFSSNVVEKFIKKLFRIITGFIVNNNGGASQRTAVASDDVINASMNILLTTIDI 391
Query: 408 LRSPNVSMLLMHPFGNYVIQSALLV 432
+ N+++L+ FGNY +Q+ L V
Sbjct: 392 F-TVNLNVLIRDNFGNYALQTLLDV 415
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 101/222 (45%), Gaps = 12/222 (5%)
Query: 227 DFQLVRICLNTHGIRAVLKLLENLTNPQQI-SLVLAALRPGAVTLTKDTNGHYVIQYCVK 285
D +++ + G R + K LE + + L+ ++P + L D G+Y++Q
Sbjct: 99 DLDYIKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQKLCD 158
Query: 286 HFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAE-------IIAN 338
+ + E L+ + N + I+ ++ G LQ ++ + L+ + I
Sbjct: 159 YLTAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQ 218
Query: 339 ALLLAEDCYGNYVVQHLLALRVPQITASLLRQL--EGHYVSFSCNKYGSNVVERCLLESG 396
+ L D GN+V+Q + P ++ + + + ++ S +K+G V+++ L
Sbjct: 219 VVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVCT 278
Query: 397 EEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLF 438
+Q +I +++++ + L+ FGNY+IQ L + ++ +
Sbjct: 279 LQQIFKISVKIVQF--LPGLINDQFGNYIIQFLLDIKELDFY 318
>gi|303324307|ref|XP_003072141.1| Pumilio-family RNA binding repeat containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240111851|gb|EER29996.1| Pumilio-family RNA binding repeat containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 835
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 150/291 (51%), Gaps = 11/291 (3%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
D+ +IV + DQ+G R +Q+ + + +E E +F E+ +LM+D FGNYV+QKL E
Sbjct: 442 DIYNHIVEFSGDQHGSRFIQQKLETANSDEKERVFQEIKPNAIQLMMDVFGNYVIQKLFE 501
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
++ Q+ + + ++ + +G R V K LE++ QQ ++V L +
Sbjct: 502 HGNQAQKKALAQQMMG---HILNLSTQMYGCRVVQKALEHVLLDQQAAMV-KELENQVIK 557
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
KD NG++VIQ ++ ++++N+ + A GC V+Q +E+ A R+
Sbjct: 558 CVKDQNGNHVIQKAIERVPQAHIQFIINDFSGQIQRWAVHSYGCRVIQRMLEHCNEADRD 617
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVE 389
++AE+ + L D +GNYV+QH++ + + ++ + V FS +K+ SNVVE
Sbjct: 618 AILAELHLCSASLIPDQFGNYVIQHVIENGRERDRSQMIAVVISQLVLFSKHKFASNVVE 677
Query: 390 RCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSALLVSK 434
+ LE G I+ + +PN + L+ FGNYVIQ L V K
Sbjct: 678 KT-LEYGGPNDRSEILRIFTTPNERGESPLEGLMKDQFGNYVIQKVLQVLK 727
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 106/219 (48%), Gaps = 15/219 (6%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ + G+I+ L+ YGCR +Q+ + + ++ + E+ ++V + + D GN+V+QK +
Sbjct: 513 QQMMGHILNLSTQMYGCRVVQKALEHVLLDQQAAMVKELENQVIKCVKDQNGNHVIQKAI 572
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
E + I ++ + Q+ R ++++G R + ++LE+ N +LA L +
Sbjct: 573 ERVPQ---AHIQFIINDFSGQIQRWAVHSYGCRVIQRMLEHC-NEADRDAILAELHLCSA 628
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
+L D G+YVIQ+ +++ D ++ V + K V++ +EY R
Sbjct: 629 SLIPDQFGNYVIQHVIENGRERDRSQMIAVVISQLVLFSKHKFASNVVEKTLEYGGPNDR 688
Query: 329 ERLV---------AEIIANALLLAEDCYGNYVVQHLLAL 358
++ E L+ +D +GNYV+Q +L +
Sbjct: 689 SEILRIFTTPNERGESPLEGLM--KDQFGNYVIQKVLQV 725
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 294 YLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQ 353
Y ++ ++ + D+ G +Q +E + ++ER+ EI NA+ L D +GNYV+Q
Sbjct: 438 YNATDIYNHIVEFSGDQHGSRFIQQKLETANSDEKERVFQEIKPNAIQLMMDVFGNYVIQ 497
Query: 354 HLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNV 413
L +L +Q+ GH ++ S YG VV++ L +Q ++ EL V
Sbjct: 498 KLFEHGNQAQKKALAQQMMGHILNLSTQMYGCRVVQKALEHVLLDQQAAMVKELEN--QV 555
Query: 414 SMLLMHPFGNYVIQSAL 430
+ GN+VIQ A+
Sbjct: 556 IKCVKDQNGNHVIQKAI 572
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 96/212 (45%), Gaps = 11/212 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+++L ++ KDQ G +Q+ + +P+ I+ I + ++ + +G V+Q++
Sbjct: 548 VKELENQVIKCVKDQNGNHVIQKAIERVPQAHIQFIINDFSGQIQRWAVHSYGCRVIQRM 607
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E C+E R IL L L+ + I+ V++ Q I++V++ L
Sbjct: 608 LEHCNEADRDAILAELHLCSASLIPDQFGNYVIQHVIENGRERDRSQMIAVVISQL---- 663
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLL------NEVADN-CYGIATDKSGCCVLQHCV 320
V +K V++ +++ D +L NE ++ G+ D+ G V+Q +
Sbjct: 664 VLFSKHKFASNVVEKTLEYGGPNDRSEILRIFTTPNERGESPLEGLMKDQFGNYVIQKVL 723
Query: 321 EYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
+ KG + + LV +I+ L + +G +
Sbjct: 724 QVLKGDEYQTLVDKIVPLLSHLKKHSHGKQIA 755
>gi|344287508|ref|XP_003415495.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1-like [Loxodonta
africana]
Length = 1185
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 156/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 845 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 904
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + QQ +V L
Sbjct: 905 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPADQQNEMVRE-LDGHV 960
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 961 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 1020
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 1021 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1080
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1081 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1132
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 134/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 898 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPADQQNEMVRELD 957
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 958 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 1012
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N +
Sbjct: 1013 LEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 1071
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 1072 SQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 1131
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 1132 EPAQRKIVMHKIRPHIATLRKYTYGKHILAK 1162
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 830 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 889
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 890 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPADQQ 949
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 950 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 1007
Query: 425 VIQSAL 430
VIQ L
Sbjct: 1008 VIQRIL 1013
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + AL+ YGCR +QR + ++ I E+ +L+ D +GNYV+Q ++E
Sbjct: 992 FKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1051
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L+L+ F +V C+ TH R
Sbjct: 1052 GRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAVLIDEVCTMNDGPHSA 1110
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1111 LYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYY 1167
>gi|67474034|ref|XP_652766.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56469651|gb|EAL47380.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|449702370|gb|EMD43022.1| pumilio domain containing protein [Entamoeba histolytica KU27]
Length = 438
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 146/274 (53%), Gaps = 8/274 (2%)
Query: 158 LAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRT 217
L KDQ G R +Q+ +EEI+ IF + ELMID FGNYV+QKLVE + +
Sbjct: 125 LCKDQQGSRKIQQFFEIATEEEIDQIFRLIYSDSIELMIDLFGNYVIQKLVEYGT---KK 181
Query: 218 RILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGH 277
+ L+ +V++ L+ +G R + K++E L+ P+++ ++ + ++ T +D NG+
Sbjct: 182 HVHLLFEKLQGNVVKLSLHMYGCRVIQKIIEVLS-PEEVRIISSEIKSNVSTFIEDQNGN 240
Query: 278 YVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA 337
+VIQ + S D ++++E+ + GC V+Q +E + +R+ +++
Sbjct: 241 HVIQKFIDFASEIDLNFMIDEIYTRAVEYSKHPYGCRVIQRLIEKNSQNCVKRVTDKLVE 300
Query: 338 NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGE 397
L+ + YGNYV+QHL+ + ++ ++G +S KY SNVVE+C+
Sbjct: 301 YVWELSINQYGNYVIQHLIQYGTNEQRVEIVNNIKGKLYEYSMKKYSSNVVEKCIRCCET 360
Query: 398 EQSTRIIIELLRS----PNVSMLLMHPFGNYVIQ 427
+ T ++ EL S ++ ++ P+ NYVIQ
Sbjct: 361 REQTILVNELCNSNVTNKQINEMICDPYANYVIQ 394
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 106/218 (48%), Gaps = 12/218 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+GN+V L+ YGCR +Q+ + L EE+ +I E+ V + D GN+V+QK
Sbjct: 187 FEKLQGNVVKLSLHMYGCRVIQKIIEVLSPEEVRIISSEIKSNVSTFIEDQNGNHVIQKF 246
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
++ SE + M+ + V + +G R + +L+E N Q + V L
Sbjct: 247 IDFASE---IDLNFMIDEIYTRAVEYSKHPYGCRVIQRLIEK--NSQNCVKRVTDKLVEY 301
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L+ + G+YVIQ+ +++ ++E ++N + Y + K V++ C+ +
Sbjct: 302 VWELSINQYGNYVIQHLIQYGTNEQRVEIVNNIKGKLYEYSMKKYSSNVVEKCIRCCETR 361
Query: 327 QRERLVAEI----IANALL--LAEDCYGNYVVQHLLAL 358
++ LV E+ + N + + D Y NYV+Q L+ +
Sbjct: 362 EQTILVNELCNSNVTNKQINEMICDPYANYVIQRLIEM 399
>gi|410916791|ref|XP_003971870.1| PREDICTED: pumilio homolog 2-like [Takifugu rubripes]
Length = 1201
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 170/341 (49%), Gaps = 37/341 (10%)
Query: 121 SVPRNQWMSSLSLKRNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLP 176
S PR + R++ L+D F LRDL G++V ++DQ+G R +Q+ +
Sbjct: 804 SRPRYSRSDVMPSGRSRLLEDFRNNRFPNLQLRDLPGHMVEFSQDQHGSRFIQQKLERAT 863
Query: 177 KEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLN 236
E +M+F E++ +LM D FGNYV+QK E S +Q+ L + T ++ + L
Sbjct: 864 PAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSADQK---LALATRIRGHVLPLALQ 920
Query: 237 THGIRAVLKLLENLTNPQQ-ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYL 295
+G R + K LE++++ QQ IS ++ L + KD NG++V+Q C++ + +++
Sbjct: 921 MYGCRVIQKALESISSDQQVISDIVRELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFI 980
Query: 296 LNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAE----------- 344
++ + ++T GC V+Q +E+ Q ++ E+ ++ L +
Sbjct: 981 IDAFKGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHSEQLGQKFQGVSLEMTP 1040
Query: 345 -------------DCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERC 391
D YGNYV+QH+L P+ + ++ ++ G + S +K+ SNVVE+C
Sbjct: 1041 KTYYTVSRDALFKDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLVLSQHKFASNVVEKC 1100
Query: 392 LLESGEEQSTRIIIEL---LRSPNVSMLLM--HPFGNYVIQ 427
++ S + +I E+ P+ ++ M + NYV+Q
Sbjct: 1101 VIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQ 1141
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 132/285 (46%), Gaps = 42/285 (14%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+RG+++ LA YGCR +Q+ + S+ ++ I I E+ V + + D GN+VVQK +
Sbjct: 910 IRGHVLPLALQMYGCRVIQKALESISSDQQVISDIVRELDGHVLKCVKDQNGNHVVQKCI 969
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISL-------- 258
E C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +
Sbjct: 970 E-CVQPQALQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHS 1024
Query: 259 ---------VLAALRPGAV------TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNC 303
V + P L KD G+YVIQ+ ++H ED ++ EV
Sbjct: 1025 EQLGQKFQGVSLEMTPKTYYTVSRDALFKDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKV 1084
Query: 304 YGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANA-------LLLAEDCYGNYVVQHLL 356
++ K V++ CV +S A+R L+ E+ + +D Y NYVVQ ++
Sbjct: 1085 LVLSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQRMI 1144
Query: 357 ALRVPQITASLLRQLEGHYVSFSCNKYGSNV---VERCLLESGEE 398
+ P ++ ++ H + YG ++ +E+ ++SG E
Sbjct: 1145 DMAEPAQRKIIMHKIRPHIATLRKYTYGKHILAKLEKYYMKSGSE 1189
>gi|238494168|ref|XP_002378320.1| mRNA binding protein Pumilio 2, putative [Aspergillus flavus
NRRL3357]
gi|220694970|gb|EED51313.1| mRNA binding protein Pumilio 2, putative [Aspergillus flavus
NRRL3357]
Length = 550
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 152/289 (52%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ ++V + DQ+G R +Q+ + + +E E +F E+ +LM D FGNYVVQKL
Sbjct: 133 LKDIYNHVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVFGNYVVQKL 192
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ ++ ++ + +G R V K LE++ QQ S+V L
Sbjct: 193 FEHGNQTQKK---ILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMV-KELEHHV 248
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ ++ E ++++N +AT GC V+Q +E+ K
Sbjct: 249 LRCVRDQNGNHVIQKAIERVPSEHVQFVINAFIGQVEKLATHPYGCRVIQRMLEHCKEED 308
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
RE ++AE+ L D +GNYV+QH++ + ++ + + +++S +K+ SNV
Sbjct: 309 REAILAELHVCTAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMSNLLTYSKHKFASNV 368
Query: 388 VERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSAL 430
VE+ +E G+E II +L S + + L+ FGNYVIQ L
Sbjct: 369 VEKS-IEFGQESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVL 416
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 96/219 (43%), Gaps = 47/219 (21%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
S +++L +++ +DQ G +Q+ + +P E ++ + I +V +L P+G V+
Sbjct: 238 ASMVKELEHHVLRCVRDQNGNHVIQKAIERVPSEHVQFVINAFIGQVEKLATHPYGCRVI 297
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
Q+++E C EE R IL L +C
Sbjct: 298 QRMLEHCKEEDREAILAEL--------HVC------------------------------ 319
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
L D G+YVIQ+ +++ +D ++ V N + K V++ +E+ +
Sbjct: 320 --TAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMSNLLTYSKHKFASNVVEKSIEFGQ 377
Query: 325 GAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLL 356
+QR ++++ + + N LL L D +GNYV+Q +L
Sbjct: 378 ESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVL 416
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S + +Y L ++ ++ + D+ G +Q +E + ++E++ EI ++L L D +
Sbjct: 125 SKGNKRYELKDIYNHVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVF 184
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYVVQ L L Q++GH ++ S YG VV++ L +Q ++ EL
Sbjct: 185 GNYVVQKLFEHGNQTQKKILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKEL 244
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 245 --EHHVLRCVRDQNGNHVIQKAI 265
>gi|403217175|emb|CCK71670.1| hypothetical protein KNAG_0H02550 [Kazachstania naganishii CBS
8797]
Length = 877
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 155/306 (50%), Gaps = 23/306 (7%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G+ + KDQYG R +Q+ +++ E E+IF E+ D + L D FGNYV+QK
Sbjct: 532 LADICGHTLEFCKDQYGSRFIQKELATASSSEKEVIFNEIRDDILTLSNDVFGNYVIQKF 591
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S+ Q+ +++ N ++ + + + R + K LE + Q+I LV L
Sbjct: 592 FEFGSKTQKD---ILIDNFSGKMKELSMQMYACRVIQKALEFIDADQRIELV-KELSDCV 647
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ + KD NG++VIQ ++ E ++L + + Y ++T GC V+Q +E+
Sbjct: 648 LKMIKDQNGNHVIQKAIECIPIELLPFVLTSLTGHIYHLSTHSYGCRVVQRLLEFGSLQD 707
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLA--------LRVPQITASLLRQLEGHYVSFS 379
+ ++ E+ L +D YGNYV+QH+L L + ++ + + V FS
Sbjct: 708 KTVILLELKDFIPYLIQDQYGNYVIQHVLQHGSDDPDCLPMVSTKQEIIEIVSKNVVEFS 767
Query: 380 CNKYGSNVVERCLLESGEEQSTRIIIELLRSP---------NVSMLLM--HPFGNYVIQS 428
+K+ SNVVE+ +L +EQ +I ++L N M+LM F NYV+Q
Sbjct: 768 KHKFASNVVEKAILYGTKEQKDSVISKILPKSKEHAANLEDNAPMILMMRDQFANYVVQK 827
Query: 429 ALLVSK 434
+ VS+
Sbjct: 828 LVTVSE 833
>gi|432883258|ref|XP_004074234.1| PREDICTED: pumilio homolog 1 [Oryzias latipes]
Length = 1166
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 155/293 (52%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRD+ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 824 LRDIAGHIMEFSQDQHGSRFIQLKLERASVAERQLVFSEILQAAYQLMVDVFGNYVIQKF 883
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S +Q+ L + ++ + L +G R + K LE + + QQ IS ++ L
Sbjct: 884 FEFGSLDQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGH 940
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ +++ + ++T GC V+Q +E+
Sbjct: 941 VLKCVKDQNGNHVVQKCIECVQPHALHFIIEAFKGQVFALSTHPYGCRVIQRILEHCLPE 1000
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L + + ++ ++ G+ + S +K+ SN
Sbjct: 1001 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASN 1060
Query: 387 VVERCLLESGEEQSTRIIIE---LLRSPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E L P+ ++ M + NYV+Q + V++
Sbjct: 1061 VVEKCVTHASRTERAMLIDEVCGLTEGPHSALYTMMKDQYANYVVQKMIDVAE 1113
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 877 NYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRE 936
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + ++ + F+ L+TH G R +
Sbjct: 937 LDGHVLKCVKDQNGNHVVQKCIE-CVQPHALHFII----EAFKGQVFALSTHPYGCRVIQ 991
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P+Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 992 RILEHCL-PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVL 1050
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
G++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 1051 GLSQHKFASNVVEKCVTHASRTERAMLIDEVCGLTEGPHSALYTMMKDQYANYVVQKMID 1110
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1111 VAEPTQRKIVMHKIRPHISTLRKYTYGKHILAK 1143
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ S + + + +E+ Y
Sbjct: 809 RLLEDFRNNRYPNLQLRDIAGHIMEFSQDQHGSRFIQLKLERASVAERQLVFSEILQAAY 868
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 869 QLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 927
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ + ++R+L+GH + ++ G++VV++C +E + + IIE + V L HP+
Sbjct: 928 QVISEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPHALHFIIEAFKG-QVFALSTHPY 985
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 986 GCRVIQRIL 994
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 41/180 (22%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ +G + AL+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q +
Sbjct: 970 IEAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHV 1029
Query: 208 VELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA---------------- 242
+E E +++I+ L L+ F +V C+ TH R
Sbjct: 1030 LEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCV-THASRTERAMLIDEVCGLTEGP 1088
Query: 243 ---------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1089 HSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHISTLRKYTYGKHILAKLEKYY 1148
>gi|70984262|ref|XP_747647.1| mRNA binding protein Pumilio 2 [Aspergillus fumigatus Af293]
gi|66845274|gb|EAL85609.1| mRNA binding protein Pumilio 2, putative [Aspergillus fumigatus
Af293]
gi|159122433|gb|EDP47554.1| mRNA binding protein Pumilio 2, putative [Aspergillus fumigatus
A1163]
Length = 908
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 151/289 (52%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ +IV + DQ+G R +Q+ + + +E E +F E+ +LM D FGNYVVQKL
Sbjct: 489 LKDIYNHIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKL 548
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ ++ ++ + +G R V K LE++ QQ S+V L
Sbjct: 549 FEHGNQSQKK---ILANQMKGHVLALSTQMYGCRVVQKALEHILTDQQASMV-KELENHV 604
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ ++ + ++++N +A GC V+Q +E+ +
Sbjct: 605 LKCVRDQNGNHVIQKAIERVPSQYVQFIINAFKGQVSRLAAHPYGCRVIQRMLEHCEEVD 664
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
RE ++AE+ A L D +GNYV+QH++ + + ++ + + +S +K+ SNV
Sbjct: 665 RESILAELHACTAHLIPDQFGNYVIQHVIENGEEKDRSRMINVVLSQLLMYSKHKFASNV 724
Query: 388 VERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSAL 430
VE+ +E GEE + II L S N + L+ +GNYVIQ L
Sbjct: 725 VEKS-IEFGEESQRQQIISTLTSANERGESPLLGLMRDQYGNYVIQKVL 772
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 125/254 (49%), Gaps = 13/254 (5%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G+++AL+ YGCR +Q+ + + ++ + E+ + V + + D GN+V+QK +E
Sbjct: 564 MKGHVLALSTQMYGCRVVQKALEHILTDQQASMVKELENHVLKCVRDQNGNHVIQKAIER 623
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ + ++ Q+ R+ + +G R + ++LE+ + S +LA L L
Sbjct: 624 VPSQ---YVQFIINAFKGQVSRLAAHPYGCRVIQRMLEHCEEVDRES-ILAELHACTAHL 679
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
D G+YVIQ+ +++ +D ++N V + K V++ +E+ + +QR++
Sbjct: 680 IPDQFGNYVIQHVIENGEEKDRSRMINVVLSQLLMYSKHKFASNVVEKSIEFGEESQRQQ 739
Query: 331 LVAEII-ANA------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+++ + AN L L D YGNYV+Q +L + L+ Q+ Y
Sbjct: 740 IISTLTSANERGESPLLGLMRDQYGNYVIQKVLGQLKGEEREGLIDQIRPLLSQLKKFSY 799
Query: 384 GSNVV--ERCLLES 395
G +V E+ + +S
Sbjct: 800 GKQIVAIEKLIFDS 813
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S + +Y L ++ ++ + D+ G +Q +E + ++E++ EI N L L D +
Sbjct: 481 SKGNKRYELKDIYNHIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVF 540
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYVVQ L L Q++GH ++ S YG VV++ L +Q ++ EL
Sbjct: 541 GNYVVQKLFEHGNQSQKKILANQMKGHVLALSTQMYGCRVVQKALEHILTDQQASMVKEL 600
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 601 EN--HVLKCVRDQNGNHVIQKAI 621
>gi|310789326|gb|EFQ24859.1| hypothetical protein GLRG_00003 [Glomerella graminicola M1.001]
Length = 821
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 152/288 (52%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G++V + DQ+G R +Q+ + + +E + +F E+ +LM D FGNYV+QK
Sbjct: 430 LKDIYGHVVEFSGDQHGSRFIQQKLETANSDEKDQVFREIEPNAIQLMKDVFGNYVIQKF 489
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + ++V + + + R V K LE++ QQ LV L P
Sbjct: 490 FEHGNQVQKKVLASQMKG---KVVDLSMQMYACRVVQKALEHVLVEQQAELV-KELEPEI 545
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ + KD NG++V+Q ++ + ++++ +A C V+Q +EY
Sbjct: 546 LKVVKDQNGNHVVQKIIELVPRQYIDFVMDSFRGQVSQLAAHMYACRVIQRMLEYGTDQD 605
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+E ++AE+ + +L D YGNYVVQH++ + + +++ + V+ S +K+ SNV
Sbjct: 606 KETILAELHNSTQVLITDQYGNYVVQHIIEHGKSEDRSRIIQLVIAQLVTMSKHKFASNV 665
Query: 388 VERCLLESGEEQSTRIIIELLR-----SPNVSMLLMHPFGNYVIQSAL 430
VE+C+ E+ I +++ + ++ +++ +GNYVIQ L
Sbjct: 666 VEKCIQYGSAEERKGIREQIISQSADGTSSLQLMMKDQYGNYVIQKLL 713
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S + +Y L ++ + + D+ G +Q +E + +++++ EI NA+ L +D +
Sbjct: 422 SKSNKRYELKDIYGHVVEFSGDQHGSRFIQQKLETANSDEKDQVFREIEPNAIQLMKDVF 481
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYV+Q L Q++G V S Y VV++ L EQ ++ EL
Sbjct: 482 GNYVIQKFFEHGNQVQKKVLASQMKGKVVDLSMQMYACRVVQKALEHVLVEQQAELVKEL 541
Query: 408 LRSPNVSMLLMHPFGNYVIQ 427
P + ++ GN+V+Q
Sbjct: 542 --EPEILKVVKDQNGNHVVQ 559
>gi|302504613|ref|XP_003014265.1| mRNA binding protein Pumilio 2, putative [Arthroderma benhamiae CBS
112371]
gi|291177833|gb|EFE33625.1| mRNA binding protein Pumilio 2, putative [Arthroderma benhamiae CBS
112371]
Length = 883
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 151/290 (52%), Gaps = 9/290 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+IV DQ+G R +Q + + +E E +F E+ +LM+D FGNYV+QKL
Sbjct: 478 LKDIYGHIVEFCGDQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKL 537
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + + + + + T+G R V K LE++ QQ ++V L
Sbjct: 538 FEHGNQAQKRLLAQQMQGN---ICSLSVQTYGCRTVQKALEHVLVEQQATMV-KELEDSV 593
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ + NG++VIQ ++ ++ +++++E AT GC V+Q +E+ A
Sbjct: 594 MKCVTNQNGNHVIQKAIERVPNQHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLAD 653
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R ++AEI A L D YGNYV+QH++ ++ + G V FS +K+ SNV
Sbjct: 654 RLSILAEIHACTPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNV 713
Query: 388 VERCLLESGEEQS---TRIIIELLRSPNVSM--LLMHPFGNYVIQSALLV 432
VE+ + EQ TRI+ + + L+ +GNYVIQ +L V
Sbjct: 714 VEKSITFGTMEQRLAITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSLSV 763
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 110/249 (44%), Gaps = 51/249 (20%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ ++GNI +L+ YGCR +Q+ + + E+ + E+ D V + + + GN+V+QK +
Sbjct: 551 QQMQGNICSLSVQTYGCRTVQKALEHVLVEQQATMVKELEDSVMKCVTNQNGNHVIQKAI 610
Query: 209 ELCSEEQRTRILLMLTNDDF--QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E Q R ++ D+F Q+ R +T+G R + ++LE+ ++S +LA +
Sbjct: 611 ERV-PNQHIRFII----DEFRGQIPRYATHTYGCRVIQRMLEHCPLADRLS-ILAEIHAC 664
Query: 267 AVTLTKDTNGHYVIQYCVK-------------------HFSHED---------------- 291
+L D G+YVIQ+ ++ HFS
Sbjct: 665 TPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNVVEKSITFGTME 724
Query: 292 -----TKYL--LNEVADN-CYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLA 343
T+ L +NE + G+ D+ G V+Q + +G + LV+ I+ LL
Sbjct: 725 QRLAITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSLSVLEGDDYKMLVSRILPLMPLLK 784
Query: 344 EDCYGNYVV 352
+ YG +
Sbjct: 785 KCSYGKQIA 793
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ +Y L ++ + D+ G +Q +E + ++ER+ EI NA+ L D +GNY
Sbjct: 473 NKRYELKDIYGHIVEFCGDQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNY 532
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
V+Q L L +Q++G+ S S YG V++ L EQ ++ EL S
Sbjct: 533 VIQKLFEHGNQAQKRLLAQQMQGNICSLSVQTYGCRTVQKALEHVLVEQQATMVKELEDS 592
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
V + + GN+VIQ A+
Sbjct: 593 --VMKCVTNQNGNHVIQKAI 610
>gi|302654395|ref|XP_003019005.1| mRNA binding protein Pumilio 2, putative [Trichophyton verrucosum
HKI 0517]
gi|291182695|gb|EFE38360.1| mRNA binding protein Pumilio 2, putative [Trichophyton verrucosum
HKI 0517]
Length = 851
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 151/290 (52%), Gaps = 9/290 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+IV DQ+G R +Q + + +E E +F E+ +LM+D FGNYV+QKL
Sbjct: 446 LKDIYGHIVEFCGDQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKL 505
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + + + + + T+G R V K LE++ QQ ++V L
Sbjct: 506 FEHGNQAQKRLLAQQMQGN---ICSLSVQTYGCRTVQKALEHVLVEQQATMV-KELEDSV 561
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ + NG++VIQ ++ ++ +++++E AT GC V+Q +E+ A
Sbjct: 562 MKCVTNQNGNHVIQKAIERVPNQHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLAD 621
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R ++AEI A L D YGNYV+QH++ ++ + G V FS +K+ SNV
Sbjct: 622 RLSILAEIHACTPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNV 681
Query: 388 VERCLLESGEEQS---TRIIIELLRSPNVSM--LLMHPFGNYVIQSALLV 432
VE+ + EQ TRI+ + + L+ +GNYVIQ +L V
Sbjct: 682 VEKSITFGTMEQRLAITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSLSV 731
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 110/249 (44%), Gaps = 51/249 (20%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ ++GNI +L+ YGCR +Q+ + + E+ + E+ D V + + + GN+V+QK +
Sbjct: 519 QQMQGNICSLSVQTYGCRTVQKALEHVLVEQQATMVKELEDSVMKCVTNQNGNHVIQKAI 578
Query: 209 ELCSEEQRTRILLMLTNDDF--QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E Q R ++ D+F Q+ R +T+G R + ++LE+ ++S +LA +
Sbjct: 579 ERVPN-QHIRFII----DEFRGQIPRYATHTYGCRVIQRMLEHCPLADRLS-ILAEIHAC 632
Query: 267 AVTLTKDTNGHYVIQYCVK-------------------HFSHED---------------- 291
+L D G+YVIQ+ ++ HFS
Sbjct: 633 TPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNVVEKSITFGTME 692
Query: 292 -----TKYL--LNEVADN-CYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLA 343
T+ L +NE + G+ D+ G V+Q + +G + LV+ I+ LL
Sbjct: 693 QRLAITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSLSVLEGDDYKMLVSRILPLMPLLK 752
Query: 344 EDCYGNYVV 352
+ YG +
Sbjct: 753 KCSYGKQIA 761
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ +Y L ++ + D+ G +Q +E + ++ER+ EI NA+ L D +GNY
Sbjct: 441 NKRYELKDIYGHIVEFCGDQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNY 500
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
V+Q L L +Q++G+ S S YG V++ L EQ ++ EL S
Sbjct: 501 VIQKLFEHGNQAQKRLLAQQMQGNICSLSVQTYGCRTVQKALEHVLVEQQATMVKELEDS 560
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
V + + GN+VIQ A+
Sbjct: 561 --VMKCVTNQNGNHVIQKAI 578
>gi|348517672|ref|XP_003446357.1| PREDICTED: pumilio homolog 2 isoform 1 [Oreochromis niloticus]
Length = 1214
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 170/341 (49%), Gaps = 37/341 (10%)
Query: 121 SVPRNQWMSSLSLKRNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLP 176
S PR + R++ L+D F LRDL G++V ++DQ+G R +Q+ +
Sbjct: 817 SRPRYSRSDVMPSGRSRLLEDFRNNRFPNLQLRDLPGHMVEFSQDQHGSRFIQQKLERAT 876
Query: 177 KEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLN 236
E +M+F E++ +LM D FGNYV+QK E S +Q+ L + T ++ + L
Sbjct: 877 PAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSADQK---LALATRIRGHVLPLALQ 933
Query: 237 THGIRAVLKLLENLTNPQQ-ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYL 295
+G R + K LE++++ QQ IS ++ L + KD NG++V+Q C++ + +++
Sbjct: 934 MYGCRVIQKALESISSDQQVISDIVRELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFI 993
Query: 296 LNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAE----------- 344
++ + ++T GC V+Q +E+ Q ++ E+ ++ L +
Sbjct: 994 IDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHSEQLGQKYQGVSLEMTP 1053
Query: 345 -------------DCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERC 391
D YGNYV+QH+L P+ + ++ ++ G + S +K+ SNVVE+C
Sbjct: 1054 KTYYTVSRDALFKDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLVLSQHKFASNVVEKC 1113
Query: 392 LLESGEEQSTRIIIEL---LRSPNVSMLLM--HPFGNYVIQ 427
++ S + +I E+ P+ ++ M + NYV+Q
Sbjct: 1114 VIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQ 1154
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 42/285 (14%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+RG+++ LA YGCR +Q+ + S+ ++ I I E+ V + + D GN+VVQK +
Sbjct: 923 IRGHVLPLALQMYGCRVIQKALESISSDQQVISDIVRELDGHVLKCVKDQNGNHVVQKCI 982
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISL-------- 258
E C + Q + ++ D FQ L+TH G R + ++LE+ T Q + +
Sbjct: 983 E-CVQPQALQFII----DAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHS 1037
Query: 259 ---------VLAALRPGAV------TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNC 303
V + P L KD G+YVIQ+ ++H ED ++ EV
Sbjct: 1038 EQLGQKYQGVSLEMTPKTYYTVSRDALFKDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKV 1097
Query: 304 YGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANA-------LLLAEDCYGNYVVQHLL 356
++ K V++ CV +S A+R L+ E+ + +D Y NYVVQ ++
Sbjct: 1098 LVLSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQRMI 1157
Query: 357 ALRVPQITASLLRQLEGHYVSFSCNKYGSNV---VERCLLESGEE 398
+ P ++ ++ H + YG ++ +E+ ++SG E
Sbjct: 1158 DMAEPAQRKIIMHKIRPHIATLRKYTYGKHILAKLEKYYMKSGSE 1202
>gi|28394605|gb|AAO38522.1| pumilio RBD [Schistocerca americana]
Length = 322
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 148/277 (53%), Gaps = 8/277 (2%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F LRDL +IV ++DQ+G R +Q+ + E +M+F E++
Sbjct: 35 RSRLLEDFRNNRFPSLQLRDLVNHIVEFSQDQHGPRFIQQKLERATVAEKQMVFSEILAA 94
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
LM D FGNYV+QK E + EQ+T + + ++ + L +G R + + LE++
Sbjct: 95 AYNLMTDVFGNYVIQKFFEFGTPEQKTTLAQKVRG---HVLPLALQMYGCRVIQRALESI 151
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
+ P+Q ++ L + KD NG++V+Q C++ ++++N + + ++T
Sbjct: 152 S-PEQQEEIVRELDGHVLKCVKDQNGNHVVQKCIECVDPHALQFIINAFSGQVFALSTHP 210
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L P+ + ++
Sbjct: 211 YGCRVIQRILEHCTPEQTAPILEELHRHTEQLIQDQYGNYVIQHVLEHGKPEDKSQIILS 270
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
+ G + S +K+ SNVVE+C+ + + +I E+
Sbjct: 271 VRGKVLVLSQHKFASNVVEKCVTHATRAERAVLIEEV 307
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 13/225 (5%)
Query: 216 RTRILLMLTNDDF----------QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
R+R+L N+ F +V + HG R + + LE T ++ +V + +
Sbjct: 35 RSRLLEDFRNNRFPSLQLRDLVNHIVEFSQDQHGPRFIQQKLERATVAEK-QMVFSEILA 93
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
A L D G+YVIQ + + E L +V + +A GC V+Q +E
Sbjct: 94 AAYNLMTDVFGNYVIQKFFEFGTPEQKTTLAQKVRGHVLPLALQMYGCRVIQRALESISP 153
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
Q+E +V E+ + L +D GN+VVQ + P ++ G + S + YG
Sbjct: 154 EQQEEIVRELDGHVLKCVKDQNGNHVVQKCIECVDPHALQFIINAFSGQVFALSTHPYGC 213
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
V++R L EQ+ I+ EL R + L+ +GNYVIQ L
Sbjct: 214 RVIQRILEHCTPEQTAPILEELHR--HTEQLIQDQYGNYVIQHVL 256
>gi|302757830|ref|XP_002962338.1| hypothetical protein SELMODRAFT_78497 [Selaginella moellendorffii]
gi|300169199|gb|EFJ35801.1| hypothetical protein SELMODRAFT_78497 [Selaginella moellendorffii]
Length = 353
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 146/275 (53%), Gaps = 9/275 (3%)
Query: 161 DQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRIL 220
DQ+G R +Q+ + + EE M+F EV+ + LM D FGNYV+QK E + +QR +
Sbjct: 1 DQHGSRFIQQKLEAATAEEKAMVFDEVLPQAFTLMTDVFGNYVIQKFFEHGNSQQRRELA 60
Query: 221 LMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVI 280
+L ++ + L +G R + K LE QQ LV+ L + +D NG++VI
Sbjct: 61 NLLVG---HMLELSLQMYGCRVIQKALEVCDVDQQTQLVVE-LDGHVMRCVRDQNGNHVI 116
Query: 281 QYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER-LVAEIIANA 339
Q C++ + +++++ ++T GC V+Q +E+ Q++ ++ EI+
Sbjct: 117 QKCIECVPPDKIQFIISAFYGQVLVLSTHPYGCRVIQRVLEHCTDDQKQAGIMEEILGAT 176
Query: 340 LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQ 399
LA+D YGNYV+QH+L P + ++ +L G V S +K+ SNVVE+CL G +
Sbjct: 177 CSLAQDQYGNYVIQHVLEHGKPHERSEIITKLAGQIVQMSQHKFASNVVEKCLEFGGPAE 236
Query: 400 STRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
++ E+L + + + ++ F NYV+Q L
Sbjct: 237 RQILVDEMLGTTDENAPLQAMMKDQFANYVVQKVL 271
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 137/267 (51%), Gaps = 12/267 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G+++ L+ YGCR +Q+ + ++ + VE+ V + D GN+V+QK +E
Sbjct: 63 LVGHMLELSLQMYGCRVIQKALEVCDVDQQTQLVVELDGHVMRCVRDQNGNHVIQKCIEC 122
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ +I +++ Q++ + + +G R + ++LE+ T+ Q+ + ++ + +L
Sbjct: 123 VPPD---KIQFIISAFYGQVLVLSTHPYGCRVIQRVLEHCTDDQKQAGIMEEILGATCSL 179
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+D G+YVIQ+ ++H + ++ ++A ++ K V++ C+E+ A+R+
Sbjct: 180 AQDQYGNYVIQHVLEHGKPHERSEIITKLAGQIVQMSQHKFASNVVEKCLEFGGPAERQI 239
Query: 331 LVAEIIA----NALLLA--EDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
LV E++ NA L A +D + NYVVQ +L Q LL +++ H + YG
Sbjct: 240 LVDEMLGTTDENAPLQAMMKDQFANYVVQKVLETCSDQQREMLLGRIKVHLHALKKYTYG 299
Query: 385 SNV---VERCLLESGEEQSTRIIIELL 408
++ VE+ + G Q+ ++I L
Sbjct: 300 KHIVARVEKLVAAGGTNQAFSLVIALF 326
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 63/163 (38%), Gaps = 42/163 (25%)
Query: 141 DSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMS-SLPKEEIEMI--------------FV 185
D + ++ G +LA+DQYG +Q + P E E+I F
Sbjct: 162 DQKQAGIMEEILGATCSLAQDQYGNYVIQHVLEHGKPHERSEIITKLAGQIVQMSQHKFA 221
Query: 186 E-VIDRVCE--------------------------LMIDPFGNYVVQKLVELCSEEQRTR 218
V+++ E +M D F NYVVQK++E CS++QR
Sbjct: 222 SNVVEKCLEFGGPAERQILVDEMLGTTDENAPLQAMMKDQFANYVVQKVLETCSDQQREM 281
Query: 219 ILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLA 261
+L + L + H + V KL+ Q SLV+A
Sbjct: 282 LLGRIKVHLHALKKYTYGKHIVARVEKLVAAGGTNQAFSLVIA 324
>gi|350585829|ref|XP_003482059.1| PREDICTED: pumilio homolog 1 isoform 1 [Sus scrofa]
Length = 640
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 157/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 300 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 359
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 360 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMV-RELDGHV 415
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 416 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 475
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 476 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 535
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLMHP--FGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 536 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 587
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 134/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 353 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELD 412
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 413 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 467
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N +
Sbjct: 468 LEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 526
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 527 SQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 586
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 587 EPAQRKIVMHKIRPHIATLRKYTYGKHILAK 617
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 285 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 344
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 345 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 404
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 405 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 462
Query: 425 VIQSAL 430
VIQ L
Sbjct: 463 VIQRIL 468
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 49/191 (25%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++ D+F +G + AL+ YGCR +QR + ++ I E+ +L+
Sbjct: 441 QFIIDAF--------KGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ 492
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA----- 242
D +GNYV+Q ++E E +++I+ L+L+ F +V C+ TH R
Sbjct: 493 DQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV-THASRTERAVL 551
Query: 243 --------------------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
V++ + ++ P Q +V+ +RP TL K T G
Sbjct: 552 IDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYG 611
Query: 277 HYVIQYCVKHF 287
+++ K++
Sbjct: 612 KHILAKLEKYY 622
>gi|285026237|dbj|BAI68041.1| Pumilio2 [Danio rerio]
Length = 1206
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 174/346 (50%), Gaps = 39/346 (11%)
Query: 118 ELSSVPRNQWMSS--LSLKRNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRT 171
+L PR ++ S + R++ L+D F LRDL G +V ++DQ+G R +Q+
Sbjct: 804 QLFPPPRARYSRSDVMPSGRSRLLEDFRNNRFPNLQLRDLPGRMVEFSQDQHGSRFIQQK 863
Query: 172 MSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLV 231
+ E +M+F E++ +LM D FGNYV+QK E S +Q+ L + T ++
Sbjct: 864 LERATSAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSADQK---LALATRIRGHVL 920
Query: 232 RICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHE 290
+ L +G R + K LE++++ QQ IS ++ L + KD NG++V+Q C++ +
Sbjct: 921 PLALQMYGCRVIQKALESISSDQQVISDIVRELDGHVLKCVKDQNGNHVVQKCIECVQPQ 980
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEI--------------- 335
+++++ + ++T GC V+Q +E+ Q ++ E+
Sbjct: 981 AFQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHFEQLGQKYQGVS 1040
Query: 336 ---------IANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
++ L +D YGNYV+QH+L P+ + ++ ++ G ++ S +K+ SN
Sbjct: 1041 LEMTPQTYYTVSSDALFKDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLALSQHKFASN 1100
Query: 387 VVERCLLESGEEQSTRIIIEL---LRSPNVSMLLM--HPFGNYVIQ 427
VVE+C++ S + +I E+ P+ ++ M + NYV+Q
Sbjct: 1101 VVEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQ 1146
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 132/285 (46%), Gaps = 42/285 (14%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+RG+++ LA YGCR +Q+ + S+ ++ I I E+ V + + D GN+VVQK +
Sbjct: 915 IRGHVLPLALQMYGCRVIQKALESISSDQQVISDIVRELDGHVLKCVKDQNGNHVVQKCI 974
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISL-------- 258
E C + Q + ++ D FQ L+TH G R + ++LE+ T Q + +
Sbjct: 975 E-CVQPQAFQFII----DAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHF 1029
Query: 259 ---------VLAALRP------GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNC 303
V + P + L KD G+YVIQ+ ++H ED ++ EV
Sbjct: 1030 EQLGQKYQGVSLEMTPQTYYTVSSDALFKDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKV 1089
Query: 304 YGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANA-------LLLAEDCYGNYVVQHLL 356
++ K V++ CV +S A+R L+ E+ + +D Y NYVVQ ++
Sbjct: 1090 LALSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQRMI 1149
Query: 357 ALRVPQITASLLRQLEGHYVSFSCNKYGSNV---VERCLLESGEE 398
+ P ++ ++ H + YG ++ +E+ +SG +
Sbjct: 1150 DMAEPAQRKIIMHKIRPHIATLRKYTYGKHILAKLEKYYTKSGSD 1194
>gi|50293245|ref|XP_449034.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528347|emb|CAG62004.1| unnamed protein product [Candida glabrata]
Length = 897
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 148/283 (52%), Gaps = 18/283 (6%)
Query: 125 NQWMSSLSLKRNQWLQDSFDCSSLRDL---RGNIVALAKDQYGCRHLQRTMSSLPKEEI- 180
NQ + + K N DS + + + + + V LA DQ+GCR LQ+ + + + +
Sbjct: 203 NQTKAKYTNKLNDVETDSINMTDISNTPLKELDYVKLATDQFGCRFLQKKLETPSESNLV 262
Query: 181 -EMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHG 239
++++ ++ EL++DPFGNY++QKL + + +QRT ++ + + FQ I +N +G
Sbjct: 263 RDLMYDQIKPYFLELILDPFGNYLIQKLCDFLTPDQRTALIEAIYPNVFQ---ISINQYG 319
Query: 240 IRAVLKLLENLTNPQQISLVLAALRP------GAVTLTKDTNGHYVIQYCVKHFSHEDTK 293
R++ K+++ + + QQI+L++ VTL D NG++VIQ C+ F
Sbjct: 320 TRSLQKIIDTVDDEQQINLIVKGFSNEYTSIRQVVTLINDLNGNHVIQKCIFKFPASKFD 379
Query: 294 YLLNEVAD--NCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYV 351
+++ + D N I+T K GCCVLQ + Q ++ +I+ L D +GNY+
Sbjct: 380 FIIAAIIDQNNIIAISTHKHGCCVLQKLLSVCTLQQTFKISVKIVQFLPNLINDQFGNYI 439
Query: 352 VQHLLALRVPQ--ITASLLRQLEGHYVSFSCNKYGSNVVERCL 392
+Q LL + + A +L G SC K+ SNVVE+ +
Sbjct: 440 IQFLLDIEELDFYMLAEFYNRLSGEICQLSCLKFSSNVVEKFM 482
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 106/221 (47%), Gaps = 18/221 (8%)
Query: 231 VRICLNTHGIRAVLKLLENLTNPQQI-SLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSH 289
V++ + G R + K LE + + L+ ++P + L D G+Y+IQ +
Sbjct: 237 VKLATDQFGCRFLQKKLETPSESNLVRDLMYDQIKPYFLELILDPFGNYLIQKLCDFLTP 296
Query: 290 EDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIAN-------ALLL 342
+ L+ + N + I+ ++ G LQ ++ Q+ L+ + +N + L
Sbjct: 297 DQRTALIEAIYPNVFQISINQYGTRSLQKIIDTVDDEQQINLIVKGFSNEYTSIRQVVTL 356
Query: 343 AEDCYGNYVVQHLL----ALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEE 398
D GN+V+Q + A + I A+++ Q + ++ S +K+G V+++ L +
Sbjct: 357 INDLNGNHVIQKCIFKFPASKFDFIIAAIIDQ--NNIIAISTHKHGCCVLQKLLSVCTLQ 414
Query: 399 QSTRIIIELLRS-PNVSMLLMHPFGNYVIQSALLVSKVRLF 438
Q+ +I +++++ PN L+ FGNY+IQ L + ++ +
Sbjct: 415 QTFKISVKIVQFLPN---LINDQFGNYIIQFLLDIEELDFY 452
>gi|344245037|gb|EGW01141.1| Pumilio-like 1 [Cricetulus griseus]
Length = 364
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 159/294 (54%), Gaps = 9/294 (3%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 21 QLREIVGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQK 80
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRP 265
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 81 FFEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDG 137
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 138 HVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLP 197
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ S
Sbjct: 198 DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFAS 257
Query: 386 NVVERCLLESGEEQSTRIIIELLR---SPNVSMLLMHP--FGNYVIQSALLVSK 434
NVVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 258 NVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 311
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 7 RLLEDFRNNRYPNLQLREIVGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAY 66
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 67 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 125
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 126 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 183
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 184 GCRVIQRIL 192
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 53/252 (21%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+RG++++LA YGCR +Q+ + +P ++ I + E+ V + + D GN+VVQK +
Sbjct: 97 IRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCI 156
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 157 E-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQH 210
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++
Sbjct: 211 TEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRT 270
Query: 327 QRERLVAEI------------------IANALL-------------------------LA 343
+R L+ E+ AN ++ L
Sbjct: 271 ERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLR 330
Query: 344 EDCYGNYVVQHL 355
+ YG +++ L
Sbjct: 331 KYTYGKHILAKL 342
>gi|315053707|ref|XP_003176228.1| pumilio domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311338074|gb|EFQ97276.1| pumilio domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 914
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 152/290 (52%), Gaps = 9/290 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+IV DQ+G R +Q + + +E E +F E+ +LM+D FGNYV+QKL
Sbjct: 508 LKDIYGHIVEFCGDQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKL 567
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ R+L + + + + T+G R V K LE++ QQ ++V L
Sbjct: 568 FEHGNQAQK-RLLAQQMQGN--ICSLSVQTYGCRTVQKALEHVLVEQQATMV-KELEDSV 623
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ + NG++VIQ ++ ++ +++++E AT GC V+Q +E+ A
Sbjct: 624 MKCVTNQNGNHVIQKAIERVPNQHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLAD 683
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R ++AEI A L D YGNYV+QH++ ++ + G V FS +K+ SNV
Sbjct: 684 RLSILAEIHACTPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNV 743
Query: 388 VERCLLESGEEQS---TRIIIELLRSPNVSM--LLMHPFGNYVIQSALLV 432
VE+ + EQ TRI+ + + L+ +GNYVIQ +L V
Sbjct: 744 VEKSITFGTMEQRLAITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSLSV 793
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 110/249 (44%), Gaps = 51/249 (20%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ ++GNI +L+ YGCR +Q+ + + E+ + E+ D V + + + GN+V+QK +
Sbjct: 581 QQMQGNICSLSVQTYGCRTVQKALEHVLVEQQATMVKELEDSVMKCVTNQNGNHVIQKAI 640
Query: 209 ELCSEEQRTRILLMLTNDDF--QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E Q R ++ D+F Q+ R +T+G R + ++LE+ ++S +LA +
Sbjct: 641 ERV-PNQHIRFII----DEFRGQIPRYATHTYGCRVIQRMLEHCPLADRLS-ILAEIHAC 694
Query: 267 AVTLTKDTNGHYVIQYCVK-------------------HFSHED---------------- 291
+L D G+YVIQ+ ++ HFS
Sbjct: 695 TPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNVVEKSITFGTME 754
Query: 292 -----TKYL--LNEVADN-CYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLA 343
T+ L +NE + G+ D+ G V+Q + +G + LV+ I+ LL
Sbjct: 755 QRLAITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSLSVLEGEDYKMLVSRIMPLMPLLK 814
Query: 344 EDCYGNYVV 352
+ YG +
Sbjct: 815 KCSYGKQIA 823
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ +Y L ++ + D+ G +Q +E + ++ER+ EI NA+ L D +GNY
Sbjct: 503 NKRYELKDIYGHIVEFCGDQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNY 562
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
V+Q L L +Q++G+ S S YG V++ L EQ ++ EL S
Sbjct: 563 VIQKLFEHGNQAQKRLLAQQMQGNICSLSVQTYGCRTVQKALEHVLVEQQATMVKELEDS 622
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
V + + GN+VIQ A+
Sbjct: 623 --VMKCVTNQNGNHVIQKAI 640
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 9/158 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ + RG I A YGCR +QR + P + I E+ L+ D +GNYV+Q +
Sbjct: 652 IDEFRGQIPRYATHTYGCRVIQRMLEHCPLADRLSILAEIHACTPSLISDQYGNYVIQHI 711
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISL--VLAALRP 265
+E E + +I+ ++ Q V + V K + T Q++++ +L+A+
Sbjct: 712 IEFGEEVDKNKIISIVLG---QAVHFSKHKFASNVVEKSITFGTMEQRLAITRILSAVNE 768
Query: 266 GA----VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV 299
+ L +D G+YVIQ + ED K L++ +
Sbjct: 769 KGEGPLLGLMRDQYGNYVIQKSLSVLEGEDYKMLVSRI 806
>gi|327309080|ref|XP_003239231.1| pumilio RBD protein [Trichophyton rubrum CBS 118892]
gi|326459487|gb|EGD84940.1| pumilio RBD protein [Trichophyton rubrum CBS 118892]
Length = 910
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 151/290 (52%), Gaps = 9/290 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+IV DQ+G R +Q + + +E E +F E+ +LM+D FGNYV+QKL
Sbjct: 505 LKDIYGHIVEFCGDQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKL 564
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + + + + + T+G R V K LE++ QQ ++V L
Sbjct: 565 FEHGNQAQKRLLAQQMQGN---ICSLSVQTYGCRTVQKALEHVLVEQQATMV-KELEDSV 620
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ + NG++VIQ ++ ++ +++++E AT GC V+Q +E+ A
Sbjct: 621 MKCVTNQNGNHVIQKAIERVPNQHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLAD 680
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R ++AEI A L D YGNYV+QH++ ++ + G V FS +K+ SNV
Sbjct: 681 RLSILAEIHACTPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNV 740
Query: 388 VERCLLESGEEQS---TRIIIELLRSPNVSM--LLMHPFGNYVIQSALLV 432
VE+ + EQ TRI+ + + L+ +GNYVIQ +L V
Sbjct: 741 VEKSITFGTMEQRLAITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSLSV 790
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 110/249 (44%), Gaps = 51/249 (20%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ ++GNI +L+ YGCR +Q+ + + E+ + E+ D V + + + GN+V+QK +
Sbjct: 578 QQMQGNICSLSVQTYGCRTVQKALEHVLVEQQATMVKELEDSVMKCVTNQNGNHVIQKAI 637
Query: 209 ELCSEEQRTRILLMLTNDDF--QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E Q R ++ D+F Q+ R +T+G R + ++LE+ ++S +LA +
Sbjct: 638 ERV-PNQHIRFII----DEFRGQIPRYATHTYGCRVIQRMLEHCPLADRLS-ILAEIHAC 691
Query: 267 AVTLTKDTNGHYVIQYCVK-------------------HFSHED---------------- 291
+L D G+YVIQ+ ++ HFS
Sbjct: 692 TPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNVVEKSITFGTME 751
Query: 292 -----TKYL--LNEVADN-CYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLA 343
T+ L +NE + G+ D+ G V+Q + +G + LV+ I+ LL
Sbjct: 752 QRLAITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSLSVLEGDDYKMLVSRILPLMPLLK 811
Query: 344 EDCYGNYVV 352
+ YG +
Sbjct: 812 KCSYGKQIA 820
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ +Y L ++ + D+ G +Q +E + ++ER+ EI NA+ L D +GNY
Sbjct: 500 NKRYELKDIYGHIVEFCGDQHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNY 559
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
V+Q L L +Q++G+ S S YG V++ L EQ ++ EL S
Sbjct: 560 VIQKLFEHGNQAQKRLLAQQMQGNICSLSVQTYGCRTVQKALEHVLVEQQATMVKELEDS 619
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
V + + GN+VIQ A+
Sbjct: 620 --VMKCVTNQNGNHVIQKAI 637
>gi|358391961|gb|EHK41365.1| hypothetical protein TRIATDRAFT_147678 [Trichoderma atroviride IMI
206040]
Length = 415
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 150/288 (52%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRD+ + V + DQ+G R +Q+ + + +E E IF E+ +LM D FGNYVVQK
Sbjct: 22 LRDIYNHAVEFSGDQHGSRFIQQKLETANSDEKEQIFREIEPNALQLMKDVFGNYVVQKF 81
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S+ Q+ ++ ++V + + + R V K LE++ QQ L L P
Sbjct: 82 FEYGSQLQKK---ILAEKMKGKVVDLSVQVYACRVVQKALEHILVEQQAELT-RELEPEI 137
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ + KD NG++V+Q ++ + +++N V +A+ GC V+Q +E+
Sbjct: 138 LRVIKDQNGNHVVQKIIELVPRQYIDFIMNAVRGQVTPLASHAYGCRVIQRLLEHGTEED 197
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ ++ E+ A+A +L D YGNYV QH++ + +++ + G ++ S +K+ SNV
Sbjct: 198 KAEIMGELHASAQILITDQYGNYVAQHVIQNGELEDRERIIQLVMGQLLTLSKHKFASNV 257
Query: 388 VERCLLESGEEQSTRIIIELLRS-PN----VSMLLMHPFGNYVIQSAL 430
VE+C+ Q T I +L + P+ + ++ FGNYVIQ L
Sbjct: 258 VEKCIEFGTPAQRTTIREQLTTAGPDGNNPLQQMMRDQFGNYVIQKML 305
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ +Y L ++ ++ + D+ G +Q +E + ++E++ EI NAL L +D +GNY
Sbjct: 17 NKRYELRDIYNHAVEFSGDQHGSRFIQQKLETANSDEKEQIFREIEPNALQLMKDVFGNY 76
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
VVQ L +++G V S Y VV++ L EQ + EL
Sbjct: 77 VVQKFFEYGSQLQKKILAEKMKGKVVDLSVQVYACRVVQKALEHILVEQQAELTREL--E 134
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
P + ++ GN+V+Q +
Sbjct: 135 PEILRVIKDQNGNHVVQKII 154
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 11/170 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG + LA YGCR +QR + +E+ I E+ L+ D +GNYV Q +++
Sbjct: 169 VRGQVTPLASHAYGCRVIQRLLEHGTEEDKAEIMGELHASAQILITDQYGNYVAQHVIQN 228
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISL--VLAALRPGA- 267
E R RI+ ++ QL+ + + V K +E T Q+ ++ L P
Sbjct: 229 GELEDRERIIQLVMG---QLLTLSKHKFASNVVEKCIEFGTPAQRTTIREQLTTAGPDGN 285
Query: 268 ---VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCC 314
+ +D G+YVIQ + E+ L+ E+ Y + KSG
Sbjct: 286 NPLQQMMRDQFGNYVIQKMLGQLQGEERDALVEEIKPQFYNLK--KSGAS 333
>gi|285026404|ref|NP_001165518.1| pumilio 2 [Oryzias latipes]
gi|261872059|gb|ACY02863.1| pumilio 2 [Oryzias latipes]
Length = 1199
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 169/339 (49%), Gaps = 37/339 (10%)
Query: 123 PRNQWMSSLSLKRNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKE 178
PR + R++ L+D F LRDL G++V ++DQ+G R +Q+ +
Sbjct: 804 PRYSRSDVMPSGRSRLLEDFRNNRFPNLQLRDLPGHMVEFSQDQHGSRFIQQKLERATPA 863
Query: 179 EIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH 238
E +M+F E++ +LM D FGNYV+QK E S +Q+ L + T ++ + L +
Sbjct: 864 ERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSPDQK---LALATRIRGHVLPLALQMY 920
Query: 239 GIRAVLKLLENLTNPQQ-ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLN 297
G R + K LE++++ QQ I ++ L + KD NG++V+Q C++ + +++++
Sbjct: 921 GCRVIQKALESISSDQQVIGDIVRELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIID 980
Query: 298 EVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAE------------- 344
+ ++T GC V+Q +E+ Q ++ E+ ++ L +
Sbjct: 981 AFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHSEQLGQKYQAVSLEMTPKT 1040
Query: 345 -----------DCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLL 393
D YGNYV+QH+L P+ + ++ ++ G ++ S +K+ SNVVE+C++
Sbjct: 1041 YYTVSRDALFKDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLALSQHKFASNVVEKCVI 1100
Query: 394 ESGEEQSTRIIIEL---LRSPNVSMLLM--HPFGNYVIQ 427
S + +I E+ P+ ++ M + NYV+Q
Sbjct: 1101 HSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQ 1139
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 42/285 (14%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+RG+++ LA YGCR +Q+ + S+ ++ I I E+ V + + D GN+VVQK +
Sbjct: 908 IRGHVLPLALQMYGCRVIQKALESISSDQQVIGDIVRELDGHVLKCVKDQNGNHVVQKCI 967
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISL-------- 258
E C + Q + ++ D FQ L+TH G R + ++LE+ T Q + +
Sbjct: 968 E-CVQPQALQFII----DAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHS 1022
Query: 259 ---------VLAALRPGAV------TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNC 303
V + P L KD G+YVIQ+ ++H ED ++ EV
Sbjct: 1023 EQLGQKYQAVSLEMTPKTYYTVSRDALFKDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKV 1082
Query: 304 YGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANA-------LLLAEDCYGNYVVQHLL 356
++ K V++ CV +S A+R L+ E+ + +D Y NYVVQ ++
Sbjct: 1083 LALSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQRMI 1142
Query: 357 ALRVPQITASLLRQLEGHYVSFSCNKYGSNV---VERCLLESGEE 398
+ P ++ ++ H + YG ++ +E+ ++SG E
Sbjct: 1143 DMAEPAQRKIIMHKIRPHIATLRKYTYGKHILAKLEKYYMKSGTE 1187
>gi|324503008|gb|ADY41314.1| Maternal protein pumilio [Ascaris suum]
Length = 736
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 154/297 (51%), Gaps = 15/297 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L DL ++V A+DQ+G R +Q+ + +E + +F EV LM D FGNYV+QK
Sbjct: 385 LSDLGNHVVEFAQDQHGSRFIQQKLERASVKEKQAVFEEVAAHAQSLMTDVFGNYVIQKF 444
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+ ++ + + ++ + L +G R + K LE++ QQ+ +L +
Sbjct: 445 FEYGTPEQKNQLTSAIKGN---VMNLALQMYGCRVIQKALESIEPNQQME-ILKEMEGQV 500
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLN---EVADNCY--GIATDKSGCCVLQHCVEY 322
+ KD NG++V+Q ++ +++++ + DN ++T GC V+Q +E+
Sbjct: 501 LKCVKDQNGNHVVQKVIERVDPSRLQFIIDAFVQPGDNLTVCNLSTHPYGCRVIQRVLEH 560
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
Q+ ++ ++ + L D YGNYV+QH++ + ++ Q++G + F+ +K
Sbjct: 561 CTEEQKRPVLDQLHMHIKTLVVDQYGNYVIQHVIEHGSMEDRDRIVNQIKGDVLRFAQHK 620
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVS------MLLMHPFGNYVIQSALLVS 433
+ SNV+E+CL +I E+ +PN + M++ F NYV+Q L V+
Sbjct: 621 FASNVIEKCLTCGAPHHKNALITEVCGNPNDTTATPLLMMMKDQFANYVVQKMLDVA 677
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 126/251 (50%), Gaps = 13/251 (5%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSL-PKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
++GN++ LA YGCR +Q+ + S+ P +++E I E+ +V + + D GN+VVQK++E
Sbjct: 460 IKGNVMNLALQMYGCRVIQKALESIEPNQQME-ILKEMEGQVLKCVKDQNGNHVVQKVIE 518
Query: 210 LCSEEQRTRIL--LMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+ I+ + D+ + + + +G R + ++LE+ T +Q VL L
Sbjct: 519 RVDPSRLQFIIDAFVQPGDNLTVCNLSTHPYGCRVIQRVLEHCTE-EQKRPVLDQLHMHI 577
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
TL D G+YVIQ+ ++H S ED ++N++ + A K V++ C+
Sbjct: 578 KTLVVDQYGNYVIQHVIEHGSMEDRDRIVNQIKGDVLRFAQHKFASNVIEKCLTCGAPHH 637
Query: 328 RERLVAEIIANA--------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFS 379
+ L+ E+ N L++ +D + NYVVQ +L + ++ ++ H +
Sbjct: 638 KNALITEVCGNPNDTTATPLLMMMKDQFANYVVQKMLDVADSAHRKKMMLAIKPHIPALR 697
Query: 380 CNKYGSNVVER 390
YG +++ +
Sbjct: 698 KYNYGKHIITK 708
>gi|159491213|ref|XP_001703567.1| puf protein [Chlamydomonas reinhardtii]
gi|158270641|gb|EDO96479.1| puf protein [Chlamydomonas reinhardtii]
Length = 314
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 143/275 (52%), Gaps = 7/275 (2%)
Query: 161 DQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRIL 220
DQ+G R +Q+ + + E++E F EV+ R+ LM D FGNYVVQK +E + EQR ++
Sbjct: 2 DQHGSRFIQQKLEGVAAEDLEAAFAEVLPRILHLMTDVFGNYVVQKFLEHGTPEQRLKLG 61
Query: 221 LMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVI 280
L QL L +G R V K LE Q+ LV L + +D NG++VI
Sbjct: 62 RALHGHVLQL---SLQMYGCRVVQKALETFPEEAQMELV-TELDGHIMRCVRDQNGNHVI 117
Query: 281 QYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLV-AEIIANA 339
Q C++ +L+ ++T GC ++Q +E+ K A+R V ++I+A A
Sbjct: 118 QKCIECVPTHRIAAVLDNFLLCVVPLSTHPFGCRIIQRILEHVKDARRRSAVMSDILAAA 177
Query: 340 LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQ 399
+ L +D YGNYV+QH+L P+ AS+ L V S +K+ SNVVE+CL
Sbjct: 178 VQLTQDQYGNYVIQHVLERGTPEERASIAASLASSVVPLSMHKFASNVVEKCLTYGSTAD 237
Query: 400 STRIIIELLRSPN--VSMLLMHPFGNYVIQSALLV 432
++ +L + V ++ FGNYV+Q L V
Sbjct: 238 RDLLVSRMLGAHGDPVQAMMKDQFGNYVVQKVLEV 272
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 133/256 (51%), Gaps = 13/256 (5%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
R L G+++ L+ YGCR +Q+ + + P+E + E+ + + D GN+V+QK +
Sbjct: 62 RALHGHVLQLSLQMYGCRVVQKALETFPEEAQMELVTELDGHIMRCVRDQNGNHVIQKCI 121
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C R +L D+F L + L+TH G R + ++LE++ + ++ S V++ +
Sbjct: 122 E-CVPTHRIAAVL----DNFLLCVVPLSTHPFGCRIIQRILEHVKDARRRSAVMSDILAA 176
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
AV LT+D G+YVIQ+ ++ + E+ + +A + ++ K V++ C+ Y A
Sbjct: 177 AVQLTQDQYGNYVIQHVLERGTPEERASIAASLASSVVPLSMHKFASNVVEKCLTYGSTA 236
Query: 327 QRERLVAEIIAN----ALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
R+ LV+ ++ + +D +GNYVVQ +L + + +L ++ +
Sbjct: 237 DRDLLVSRMLGAHGDPVQAMMKDQFGNYVVQKVLEVCSDEQREVMLARVRQQLHALKRYT 296
Query: 383 YGSNVVERC--LLESG 396
YG ++V R LL +G
Sbjct: 297 YGKHIVARVEKLLSAG 312
>gi|74180929|dbj|BAE27746.1| unnamed protein product [Mus musculus]
Length = 944
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 156/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 604 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 663
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 664 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMV-RELDGHV 719
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q + + Q
Sbjct: 720 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILGHCLPDQ 779
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 780 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 839
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLMHP--FGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 840 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 891
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 589 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAY 648
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 649 QLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 708
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 709 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 766
Query: 425 VIQSAL 430
VIQ L
Sbjct: 767 VIQRIL 772
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 110/250 (44%), Gaps = 51/250 (20%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG++++LA YGCR +Q+ + +P ++ + E+ V + + D GN+VVQK +E
Sbjct: 679 IRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIE- 737
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++L + P Q +L L
Sbjct: 738 CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILGHCL-PDQTLPILEELHQHTE 792
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++ +R
Sbjct: 793 QLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTER 852
Query: 329 ERLVAEI------------------IANALL-------------------------LAED 345
L+ E+ AN ++ L +
Sbjct: 853 AVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKY 912
Query: 346 CYGNYVVQHL 355
YG +++ L
Sbjct: 913 TYGKHILAKL 922
>gi|254578844|ref|XP_002495408.1| ZYRO0B10560p [Zygosaccharomyces rouxii]
gi|238938298|emb|CAR26475.1| ZYRO0B10560p [Zygosaccharomyces rouxii]
Length = 919
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 156/305 (51%), Gaps = 22/305 (7%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
++D+ G ++ +DQ+G R +Q ++S E E+IF E+ D+ EL D FGNYV+QK
Sbjct: 575 IKDIVGYVLEFCQDQHGSRFIQYELASASPSEREVIFNEIRDQAVELSDDVFGNYVIQKF 634
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S+ QR +++ ++ + + + R + + LE + Q+I LV L
Sbjct: 635 FEFGSKTQRD---ILVNQFKGKMQELSMQMYACRVIQRALEFIELEQRIDLV-QELSTCV 690
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ + KD NG++VIQ ++ + ++LN + Y ++T GC V+Q +E+
Sbjct: 691 LEMIKDQNGNHVIQKAIESIPMTELPFILNSLDGQIYHLSTHAYGCRVIQRLLEFGSEND 750
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLA------LR-VPQITASLLRQLEGHYVSFSC 380
+ R+ EI L +D YGNYV+QH+L LR + + ++ + V FS
Sbjct: 751 QTRIFREIKDFIPFLIQDQYGNYVIQHVLQQDGSNCLREMAETKQDIVNIVSQTVVEFSK 810
Query: 381 NKYGSNVVERCLLESGEEQSTRIIIELLRS---------PNVSMLLM--HPFGNYVIQSA 429
+K+ SNVVE+ +L +Q I+ +++ S N ++LM F NYV+Q
Sbjct: 811 HKFASNVVEKAILYGTRDQRRLIMSKVMPSDESSAANLEENAPLVLMMRDQFANYVVQKL 870
Query: 430 LLVSK 434
+ VS+
Sbjct: 871 VGVSE 875
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
D Y + ++ D+ G +Q+ + + ++RE + EI A+ L++D +GNY
Sbjct: 570 DKTYKIKDIVGYVLEFCQDQHGSRFIQYELASASPSEREVIFNEIRDQAVELSDDVFGNY 629
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
V+Q L+ Q +G S Y V++R L EQ ++ EL S
Sbjct: 630 VIQKFFEFGSKTQRDILVNQFKGKMQELSMQMYACRVIQRALEFIELEQRIDLVQEL--S 687
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
V ++ GN+VIQ A+
Sbjct: 688 TCVLEMIKDQNGNHVIQKAI 707
>gi|440298987|gb|ELP91602.1| pumilio domain containing protein C6G9.14, putative [Entamoeba
invadens IP1]
Length = 486
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 147/283 (51%), Gaps = 11/283 (3%)
Query: 155 IVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEE 214
+ L KDQ G R +Q+ + + K E+E IF + + + ELM+D FGNYV+QKL E ++E
Sbjct: 170 VTDLCKDQQGSRRIQQFLDTASKAEVEEIFNFISNDIYELMLDLFGNYVIQKLFEFGTKE 229
Query: 215 QRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDT 274
R + ++ + ++V + +T+G R + K +E + +Q+ ++ ++ V +D
Sbjct: 230 IRDVFMDVVKS---RVVMLSTHTYGCRVIQKAVE-FIDAKQMGILADEIKGHIVAFVEDQ 285
Query: 275 NGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAE 334
NG++VIQ ++ + + E+ + GC V+Q VE + L E
Sbjct: 286 NGNHVIQRFIEFMPSIYSSMISEEITGHVVSFGKHAYGCRVVQKLVERREDVIHRTLNKE 345
Query: 335 IIANALLLAEDCYGNYVVQHLL--ALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCL 392
+ N LA + YGNYV+QHLL RV Q ++ +++G + FS KY SNVVE+C+
Sbjct: 346 LENNIWDLAMNQYGNYVIQHLLEKGTRVQQ--NMVINEMKGKFCEFSTKKYSSNVVEKCM 403
Query: 393 LESGEEQSTRIIIELLRSPNVSMLL---MHPFGNYVIQSALLV 432
Q + E+ + MLL P+ NYVIQ+ + V
Sbjct: 404 HCCTPTQRDGFVNEICGKKDNEMLLKLMKDPYANYVIQTLVEV 446
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 14/226 (6%)
Query: 143 FDCSSLRDL-----RGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMID 197
F +RD+ + +V L+ YGCR +Q+ + + +++ ++ E+ + + D
Sbjct: 225 FGTKEIRDVFMDVVKSRVVMLSTHTYGCRVIQKAVEFIDAKQMGILADEIKGHIVAFVED 284
Query: 198 PFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQIS 257
GN+V+Q+ +E + I +T +V + +G R V KL+E + +
Sbjct: 285 QNGNHVIQRFIEFMPSIYSSMISEEITG---HVVSFGKHAYGCRVVQKLVERREDVIHRT 341
Query: 258 LVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQ 317
L L L + G+YVIQ+ ++ + ++NE+ +T K V++
Sbjct: 342 LN-KELENNIWDLAMNQYGNYVIQHLLEKGTRVQQNMVINEMKGKFCEFSTKKYSSNVVE 400
Query: 318 HCVEYSKGAQRERLVAEIIANA-----LLLAEDCYGNYVVQHLLAL 358
C+ QR+ V EI L L +D Y NYV+Q L+ +
Sbjct: 401 KCMHCCTPTQRDGFVNEICGKKDNEMLLKLMKDPYANYVIQTLVEV 446
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 61/135 (45%), Gaps = 2/135 (1%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
++L NI LA +QYG +Q + + + M+ E+ + CE + + VV+K +
Sbjct: 344 KELENNIWDLAMNQYGNYVIQHLLEKGTRVQQNMVINEMKGKFCEFSTKKYSSNVVEKCM 403
Query: 209 ELCSEEQRTRIL--LMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
C+ QR + + D+ L+++ + + + L+E + Q+ + + P
Sbjct: 404 HCCTPTQRDGFVNEICGKKDNEMLLKLMKDPYANYVIQTLVEVMDEEQRKCFIEKRVFPN 463
Query: 267 AVTLTKDTNGHYVIQ 281
L K + +++Q
Sbjct: 464 INQLKKVSYSKHLLQ 478
>gi|90074793|dbj|BAD95609.2| pumilio-1 [Oncorhynchus mykiss]
Length = 1159
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 156/293 (53%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 817 LREIAGHIMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKF 876
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S +Q+ L + ++ + L +G R + K LE + + QQ IS ++ L
Sbjct: 877 FEFGSLDQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGH 933
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ ++++ + ++T GC V+Q +E+
Sbjct: 934 VLKCVKDQNGNHVVQKCIECVQPHALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 993
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L + + ++ ++ G+ + S +K+ SN
Sbjct: 994 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASN 1053
Query: 387 VVERCLLESGEEQSTRIIIE---LLRSPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E L P+ ++ M + NYV+Q + V++
Sbjct: 1054 VVEKCVSHASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMIDVAE 1106
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 129/251 (51%), Gaps = 17/251 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+RG++++LA YGCR +Q+ + +P ++ I + E+ V + + D GN+VVQK +
Sbjct: 892 IRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNGNHVVQKCI 951
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 952 E-CVQPHALHFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQH 1005
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YVIQ+ ++H ED ++ E+ N G++ K V++ CV ++ A
Sbjct: 1006 TEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVSHASRA 1065
Query: 327 QRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFS 379
+R L+ E+ + +AL + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 1066 ERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHISTLR 1125
Query: 380 CNKYGSNVVER 390
YG +++ +
Sbjct: 1126 KYTYGKHILAK 1136
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ S + + + +E+ Y
Sbjct: 802 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAY 861
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 862 QLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 920
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ + ++R+L+GH + ++ G++VV++C +E + + II+ + V L HP+
Sbjct: 921 QVISEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPHALHFIIDAFKG-QVFALSTHPY 978
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 979 GCRVIQRIL 987
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + AL+ YGCR +QR + ++ I E+ +L+ D +GNYV+Q ++E
Sbjct: 966 FKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH 1025
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ +H RA
Sbjct: 1026 GRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCV-SHASRAERAVLIDEVCSLTEGPHSA 1084
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1085 LYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHISTLRKYTYGKHILAKLEKYY 1141
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCEL-----------MI 196
+ ++RGN++ L++ ++ +++ +S + E ++ ID VC L M
Sbjct: 1035 VAEIRGNVLGLSQHKFASNVVEKCVSHASRAERAVL----IDEVCSLTEGPHSALYTMMK 1090
Query: 197 DPFGNYVVQKLVELCSEEQRTRIL 220
D + NYVVQK++++ QR ++
Sbjct: 1091 DQYANYVVQKMIDVAEPTQRKIVM 1114
>gi|67475695|ref|XP_653533.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56470496|gb|EAL48147.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|449704716|gb|EMD44904.1| pumilio family RNA-binding protein, putative [Entamoeba histolytica
KU27]
Length = 484
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 146/281 (51%), Gaps = 7/281 (2%)
Query: 155 IVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEE 214
+ L KDQ G R +Q+ + + EIE +F +I ELM D FGNYV+QKL+E + E
Sbjct: 168 VADLCKDQQGSRRIQQFLDTAQPNEIEELFEFIIKDSFELMTDLFGNYVIQKLIEYGTIE 227
Query: 215 QRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDT 274
+ + + ++ +V + L+T+G R + K E ++ +++ ++ ++ V +D
Sbjct: 228 HKHQFMEIIKG---HVVELSLHTYGCRVIQKACEFISG-EELGIIAEEIKGHIVEFVEDQ 283
Query: 275 NGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAE 334
NG++VIQ ++ + + NE++ + GC V+Q +E + + + +E
Sbjct: 284 NGNHVIQKFIEFMPSTYSSLIANEISGYIISFSKHAYGCRVVQKLIERKEPLIQNVITSE 343
Query: 335 IIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLE 394
+ N LA + YGNYV+QHLL Q ++ +++G + +S KY SNVVE+C+
Sbjct: 344 LKNNIWDLAVNQYGNYVIQHLLENGNQQQHNLVISEMKGKFCEYSMKKYSSNVVEKCVHC 403
Query: 395 SGEEQSTRIIIELLRSPNVSMLL---MHPFGNYVIQSALLV 432
Q I E+ + MLL P+ NYVIQ+ + V
Sbjct: 404 CTSAQRDNFIDEICSKKDNEMLLKLMKDPYANYVIQTLVEV 444
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 105/213 (49%), Gaps = 9/213 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++G++V L+ YGCR +Q+ + EE+ +I E+ + E + D GN+V+QK +E
Sbjct: 236 IKGHVVELSLHTYGCRVIQKACEFISGEELGIIAEEIKGHIVEFVEDQNGNHVIQKFIEF 295
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ I ++ ++ + +G R V KL+E P +++ + L+ L
Sbjct: 296 MPSTYSSLIANEISG---YIISFSKHAYGCRVVQKLIER-KEPLIQNVITSELKNNIWDL 351
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
+ G+YVIQ+ +++ + + +++E+ + K V++ CV AQR+
Sbjct: 352 AVNQYGNYVIQHLLENGNQQQHNLVISEMKGKFCEYSMKKYSSNVVEKCVHCCTSAQRDN 411
Query: 331 LVAEIIANA-----LLLAEDCYGNYVVQHLLAL 358
+ EI + L L +D Y NYV+Q L+ +
Sbjct: 412 FIDEICSKKDNEMLLKLMKDPYANYVIQTLVEV 444
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
++ G I++ +K YGCR +Q+ + +I E+ + + +L ++ +GNYV+Q L+E
Sbjct: 307 EISGYIISFSKHAYGCRVVQKLIERKEPLIQNVITSELKNNIWDLAVNQYGNYVIQHLLE 366
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLV--LAALRPGA 267
+++Q L+++ + + + V K + T+ Q+ + + + + +
Sbjct: 367 NGNQQQHN---LVISEMKGKFCEYSMKKYSSNVVEKCVHCCTSAQRDNFIDEICSKKDNE 423
Query: 268 V--TLTKDTNGHYVIQYCVK 285
+ L KD +YVIQ V+
Sbjct: 424 MLLKLMKDPYANYVIQTLVE 443
>gi|158828286|gb|ABW81162.1| PMpt5-1 [Capsella rubella]
Length = 961
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 146/288 (50%), Gaps = 45/288 (15%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G++V + DQYG R +Q+ + + +E +++ E++ + LM D FGNYV+QK
Sbjct: 634 LSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNIVYEEIMPQALALMTDVFGNYVIQKA 693
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E+ +Q+ +++ L + H +R V
Sbjct: 694 IEVVDLDQKIKMVKEL------------DGHVMRCV------------------------ 717
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY-SKGA 326
+D NG++V+Q C++ E+ +++++ N ++T GC V+Q +E+ +
Sbjct: 718 ----RDQNGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHEPD 773
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ +++ EI+ +LA+D YGNYV+QH+L P ++++L G V S K+ SN
Sbjct: 774 TQSKVMEEIMTTVSMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASN 833
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL G EQ ++ E+L + + + ++ F NYV+Q L
Sbjct: 834 VVEKCLTFGGPEQRELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL 881
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S++ + L+E+A + ++D+ G +Q +E + ++ + EI+ AL L D +
Sbjct: 626 SNKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNIVYEEIMPQALALMTDVF 685
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYV+Q + + ++++L+GH + ++ G++VV++C +E E++ II
Sbjct: 686 GNYVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHVVQKC-IECVPEENIEFIIST 744
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
NV L HP+G VIQ L
Sbjct: 745 FFG-NVVTLSTHPYGCRVIQRVL 766
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 1/185 (0%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
+LE + + L+ + V + D G IQ ++ + ++ + E+
Sbjct: 620 MLEEFKSNKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNIVYEEIMPQALA 679
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q +E Q+ ++V E+ + + D GN+VVQ + +
Sbjct: 680 LMTDVFGNYVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIE 739
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
++ G+ V+ S + YG V++R L E + ++E + + VSML +GNYV
Sbjct: 740 FIISTFFGNVVTLSTHPYGCRVIQRVLEHCHEPDTQSKVMEEIMT-TVSMLAQDQYGNYV 798
Query: 426 IQSAL 430
IQ L
Sbjct: 799 IQHVL 803
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+++L G IV +++ ++ +++ ++ E+ E++ E++ E +M D F N
Sbjct: 815 IKELAGKIVQMSQQKFASNVVEKCLTFGGPEQRELLVNEMLGTTDENEPLQAMMKDQFAN 874
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 875 YVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHIVARVEKLV 920
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 368 LRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQ 427
L ++ GH V FS ++YGS +++ L + ++ + E++ P L+ FGNYVIQ
Sbjct: 634 LSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNIVYEEIM--PQALALMTDVFGNYVIQ 691
Query: 428 SALLV 432
A+ V
Sbjct: 692 KAIEV 696
>gi|358336596|dbj|GAA55061.1| pumilio homolog 2 [Clonorchis sinensis]
Length = 1498
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 154/311 (49%), Gaps = 22/311 (7%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F +L LR ++V A+DQ+G R +Q+ + + E +F E++ +LM D FGNY
Sbjct: 1094 FQQVTLSQLRDHMVEFARDQHGSRFIQQKLETASTVEKNAVFAEILPHSGKLMTDVFGNY 1153
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
V+QK E ++EQ+ + L +V +G R + K LE++ +I +V +
Sbjct: 1154 VIQKFFEFGTKEQKELLSQRLQG---HVVEFATQMYGCRVIQKALESVPPDTKIRIV-SE 1209
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
LRP KD NG++VIQ C++ + +++ +++ GC V+Q +E+
Sbjct: 1210 LRPYVTRCVKDQNGNHVIQKCIECVQPSELDFIIAAFRGQVVSLSSHPYGCRVIQRILEH 1269
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
Q ++ E+ L +D YGNYV+QH+L +P + +++ L G + S +K
Sbjct: 1270 CLAEQTRPILEELHEGVDHLVKDQYGNYVIQHVLEHGLPGDKSRIIQSLRGRVSTLSAHK 1329
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSP----------------NVSMLLMHP--FGNY 424
+ SNV+E+ + + + +I E+L P N S++ M + NY
Sbjct: 1330 FASNVMEKAIANAQPSERAILIDEILHPPTCLNLSGESVTTPSSSNSSLIDMMKDQYANY 1389
Query: 425 VIQSALLVSKV 435
V+Q L ++++
Sbjct: 1390 VVQRMLELAEM 1400
>gi|302793089|ref|XP_002978310.1| hypothetical protein SELMODRAFT_107963 [Selaginella moellendorffii]
gi|300154331|gb|EFJ20967.1| hypothetical protein SELMODRAFT_107963 [Selaginella moellendorffii]
Length = 354
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 149/280 (53%), Gaps = 9/280 (3%)
Query: 156 VALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQ 215
V + DQ+G R +Q+ + + E+ M+F EV + LM D FGNYV+QK E + +Q
Sbjct: 3 VHCSADQHGSRFIQQKLETATAEDKAMVFQEVFPQAVALMTDVFGNYVIQKFFEHGTAQQ 62
Query: 216 RTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTN 275
R + L + +++ + L +G R + K LE + QQ LV + L + +D N
Sbjct: 63 RKELAQQLPS---RVLTLSLQMYGCRVIQKALEVVDVDQQTQLV-SELDGHVMRCVRDQN 118
Query: 276 GHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER-LVAE 334
G++VIQ C++ + ++++ ++T GC V+Q +E+ Q+++ ++ E
Sbjct: 119 GNHVIQKCIECVPADRIQFIICAFYGQVLALSTHPYGCRVIQRVLEHCTDEQKQQGIMQE 178
Query: 335 IIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLE 394
I+ + LA+D YGNYVVQH+L + ++ +L G V S +K+ SNV+E+CL
Sbjct: 179 ILRSTCSLAQDQYGNYVVQHVLEHGTQPERSEIITKLAGQIVQMSQHKFASNVIEKCLQF 238
Query: 395 SGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
G + +I E+L S + + ++ F NYV+Q L
Sbjct: 239 GGPAERQILINEMLGSTDENEALQAMMKDQFANYVVQKVL 278
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 126/248 (50%), Gaps = 9/248 (3%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ L ++ L+ YGCR +Q+ + + ++ + E+ V + D GN+V+QK +
Sbjct: 68 QQLPSRVLTLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGHVMRCVRDQNGNHVIQKCI 127
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
E + RI ++ Q++ + + +G R + ++LE+ T+ Q+ ++ +
Sbjct: 128 ECVPAD---RIQFIICAFYGQVLALSTHPYGCRVIQRVLEHCTDEQKQQGIMQEILRSTC 184
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
+L +D G+YV+Q+ ++H + + ++ ++A ++ K V++ C+++ A+R
Sbjct: 185 SLAQDQYGNYVVQHVLEHGTQPERSEIITKLAGQIVQMSQHKFASNVIEKCLQFGGPAER 244
Query: 329 ERLVAEIIA----NALLLA--EDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ L+ E++ N L A +D + NYVVQ +L + + LL +++ H +
Sbjct: 245 QILINEMLGSTDENEALQAMMKDQFANYVVQKVLEICDDRQREILLTRIKVHLHALKKYT 304
Query: 383 YGSNVVER 390
YG ++V R
Sbjct: 305 YGKHIVAR 312
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Query: 303 CYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ 362
C + D+ G +Q +E + + + E+ A+ L D +GNYV+Q Q
Sbjct: 2 CVHCSADQHGSRFIQQKLETATAEDKAMVFQEVFPQAVALMTDVFGNYVIQKFFEHGTAQ 61
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFG 422
L +QL ++ S YG V+++ L +Q T+++ EL +V + G
Sbjct: 62 QRKELAQQLPSRVLTLSLQMYGCRVIQKALEVVDVDQQTQLVSEL--DGHVMRCVRDQNG 119
Query: 423 NYVIQSAL 430
N+VIQ +
Sbjct: 120 NHVIQKCI 127
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ + E +++ E++ E +M D F N
Sbjct: 212 ITKLAGQIVQMSQHKFASNVIEKCLQFGGPAERQILINEMLGSTDENEALQAMMKDQFAN 271
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E+C + QR +L + L + H + V KL+
Sbjct: 272 YVVQKVLEICDDRQREILLTRIKVHLHALKKYTYGKHIVARVEKLV 317
>gi|168278511|dbj|BAG11135.1| pumilio homolog 1 [synthetic construct]
Length = 1162
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 158/293 (53%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +L +D FGNYV+QK
Sbjct: 820 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLNVDVFGNYVIQKF 879
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 880 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 936
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 937 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 996
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 997 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1056
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1057 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1109
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 873 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE 932
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 933 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 987
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 988 RILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1046
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 1047 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1106
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1107 VAEPGQRKIVMHKIRPHIATLRKYTYGKHILAK 1139
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 805 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 864
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 865 QLNVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 923
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 924 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 981
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 982 GCRVIQRIL 990
>gi|58257646|dbj|BAA07895.3| KIAA0099 protein [Homo sapiens]
Length = 1175
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 158/293 (53%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +L +D FGNYV+QK
Sbjct: 833 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLNVDVFGNYVIQKF 892
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 893 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 949
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 950 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 1009
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 1010 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1069
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1070 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1122
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 886 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE 945
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R +
Sbjct: 946 LDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQ 1000
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N
Sbjct: 1001 RILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVL 1059
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLA 357
++ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++
Sbjct: 1060 VLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 1119
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1120 VAEPGQRKIVMHKIRPHIATLRKYTYGKHILAK 1152
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 818 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 877
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 878 QLNVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 936
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+
Sbjct: 937 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPY 994
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 995 GCRVIQRIL 1003
>gi|443699258|gb|ELT98839.1| hypothetical protein CAPTEDRAFT_180493 [Capitella teleta]
Length = 632
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 139/260 (53%), Gaps = 4/260 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+DL ++V ++DQ+G R +Q+ + E M+F E++ LM D FGNYV+QK
Sbjct: 228 LKDLANHVVEFSQDQHGSRFIQQKLERALPAEKSMVFNEILSAAYSLMTDVFGNYVIQKF 287
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+ + + ++ + L +G R + K LE++ + Q+ +V L
Sbjct: 288 FEFGTSEQKQTLAQRVRG---HVLPLALQMYGCRVIQKALESIPSEMQVEIV-KELDGHV 343
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + ++L++ + ++T GC V+Q +E+ Q
Sbjct: 344 LKCVKDQNGNHVVQKCIECVEPKQLQFLIDAFKGQVFTLSTHPYGCRVIQRILEHCVSEQ 403
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ +L G + S +K+ SNV
Sbjct: 404 TNPVLDELHVHTERLVQDQYGNYVIQHVLEHGRPEDKSKIVSELRGRVLVLSQHKFASNV 463
Query: 388 VERCLLESGEEQSTRIIIEL 407
VE+C+ S + +I E+
Sbjct: 464 VEKCVTYSSRAERAMLIDEV 483
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 104/191 (54%), Gaps = 8/191 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++ LA YGCR +Q+ + S+P E I E+ V + + D GN+VVQK +E
Sbjct: 303 VRGHVLPLALQMYGCRVIQKALESIPSEMQVEIVKELDGHVLKCVKDQNGNHVVQKCIE- 361
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C E ++ + L+ D F+ L+TH G R + ++LE+ + +Q + VL L
Sbjct: 362 CVEPKQLQFLI----DAFKGQVFTLSTHPYGCRVIQRILEHCVS-EQTNPVLDELHVHTE 416
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED +++E+ ++ K V++ CV YS A+R
Sbjct: 417 RLVQDQYGNYVIQHVLEHGRPEDKSKIVSELRGRVLVLSQHKFASNVVEKCVTYSSRAER 476
Query: 329 ERLVAEIIANA 339
L+ E+ + A
Sbjct: 477 AMLIDEVCSMA 487
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 3/201 (1%)
Query: 230 LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSH 289
+V + HG R + + LE P + S+V + A +L D G+YVIQ + +
Sbjct: 235 VVEFSQDQHGSRFIQQKLERAL-PAEKSMVFNEILSAAYSLMTDVFGNYVIQKFFEFGTS 293
Query: 290 EDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGN 349
E + L V + +A GC V+Q +E + +V E+ + L +D GN
Sbjct: 294 EQKQTLAQRVRGHVLPLALQMYGCRVIQKALESIPSEMQVEIVKELDGHVLKCVKDQNGN 353
Query: 350 YVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLR 409
+VVQ + P+ L+ +G + S + YG V++R L EQ+ ++ EL
Sbjct: 354 HVVQKCIECVEPKQLQFLIDAFKGQVFTLSTHPYGCRVIQRILEHCVSEQTNPVLDEL-- 411
Query: 410 SPNVSMLLMHPFGNYVIQSAL 430
+ L+ +GNYVIQ L
Sbjct: 412 HVHTERLVQDQYGNYVIQHVL 432
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + NE+ Y
Sbjct: 213 RLLEDFRNNRIPNLQLKDLANHVVEFSQDQHGSRFIQQKLERALPAEKSMVFNEILSAAY 272
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q++ L + + L LA YG V+Q L ++
Sbjct: 273 SLMTDVFGNYVIQKFFEFGTSEQKQTLAQRVRGHVLPLALQMYGCRVIQKALESIPSEMQ 332
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++++L+GH + ++ G++VV++C +E E + + +I+ + V L HP+G
Sbjct: 333 VEIVKELDGHVLKCVKDQNGNHVVQKC-IECVEPKQLQFLIDAFKG-QVFTLSTHPYGCR 390
Query: 425 VIQSAL 430
VIQ L
Sbjct: 391 VIQRIL 396
>gi|326676804|ref|XP_002665632.2| PREDICTED: pumilio homolog 1 [Danio rerio]
Length = 1152
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 157/293 (53%), Gaps = 9/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+++ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 810 LREIAGHVMEFSQDQHGSRFIQLKLERASPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 869
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
E S +Q+ L + ++ + L +G R + K LE + + QQ I+ ++ L
Sbjct: 870 FEFGSLDQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGH 926
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ +++++ + ++T GC V+Q +E+
Sbjct: 927 VLKCVKDQNGNHVVQKCIECVQPHALQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPE 986
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ EI + L +D YGNYV+QH+L + + ++ ++ G+ + S +K+ SN
Sbjct: 987 QTLSILEEIHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVSEIRGNVLGLSQHKFASN 1046
Query: 387 VVERCLLESGEEQSTRIIIE---LLRSPNVSMLLM--HPFGNYVIQSALLVSK 434
VVE+C+ S + +I E + P+ ++ M + NYV+Q + V++
Sbjct: 1047 VVEKCVTHSLRAERAMLIDEVCSMADGPHSALYTMMKDQYANYVVQKMIDVAE 1099
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 137/273 (50%), Gaps = 24/273 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVE 186
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ I + E
Sbjct: 863 NYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE 922
Query: 187 VIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVL 244
+ V + + D GN+VVQK +E C + + ++ D F+ L+TH G R +
Sbjct: 923 LDGHVLKCVKDQNGNHVVQKCIE-CVQPHALQFII----DAFKGQVFALSTHPYGCRVIQ 977
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
++LE+ P+Q +L + L +D G+YVIQ+ ++H ED +++E+ N
Sbjct: 978 RILEHCL-PEQTLSILEEIHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVSEIRGNVL 1036
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANA-------LLLAEDCYGNYVVQHLLA 357
G++ K V++ CV +S A+R L+ E+ + A + +D Y NYVVQ ++
Sbjct: 1037 GLSQHKFASNVVEKCVTHSLRAERAMLIDEVCSMADGPHSALYTMMKDQYANYVVQKMID 1096
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ P ++ ++ H + YG +++ +
Sbjct: 1097 VAEPTQRKIVMHKIRPHIATLRKYTYGKHILAK 1129
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 6/189 (3%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ S + + + NE+ Y
Sbjct: 795 RLLEDFRNNRYPNLQLREIAGHVMEFSQDQHGSRFIQLKLERASPAERQLVFNEILQAAY 854
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVP--- 361
+ D G V+Q E+ Q+ L I + L LA YG V+Q L +P
Sbjct: 855 QLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ 913
Query: 362 QITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPF 421
Q+ ++R+L+GH + ++ G++VV++C +E + + + II+ + V L HP+
Sbjct: 914 QVINEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPHALQFIIDAFKG-QVFALSTHPY 971
Query: 422 GNYVIQSAL 430
G VIQ L
Sbjct: 972 GCRVIQRIL 980
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 41/177 (23%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + AL+ YGCR +QR + E+ I E+ +L+ D +GNYV+Q ++E
Sbjct: 959 FKGQVFALSTHPYGCRVIQRILEHCLPEQTLSILEEIHQHTEQLVQDQYGNYVIQHVLEH 1018
Query: 211 CSEEQRTRIL-------LMLTNDDF--QLVRICLNTHGIRA------------------- 242
E +++I+ L L+ F +V C+ TH +RA
Sbjct: 1019 GRAEDKSKIVSEIRGNVLGLSQHKFASNVVEKCV-THSLRAERAMLIDEVCSMADGPHSA 1077
Query: 243 ------------VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
V++ + ++ P Q +V+ +RP TL K T G +++ K++
Sbjct: 1078 LYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYY 1134
>gi|178847547|pdb|3BSB|A Chain A, Crystal Structure Of Human Pumilio1 In Complex With
Cyclinb Reverse Rna
gi|178847548|pdb|3BSB|B Chain B, Crystal Structure Of Human Pumilio1 In Complex With
Cyclinb Reverse Rna
gi|178847550|pdb|3BSX|A Chain A, Crystal Structure Of Human Pumilio 1 In Complex With Puf5
Rna
gi|178847551|pdb|3BSX|B Chain B, Crystal Structure Of Human Pumilio 1 In Complex With Puf5
Rna
Length = 343
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 157/293 (53%), Gaps = 9/293 (3%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 18 QLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQK 77
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 78 FFEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMV-RELDGH 133
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 134 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 193
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 194 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 253
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLMHP--FGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 254 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 306
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 134/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 72 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELD 131
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 132 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 186
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N +
Sbjct: 187 LEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 245
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 246 SQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 305
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 306 EPGQRKIVMHKIRPHIATLRKYTYGKHILAK 336
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 4 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 63
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 64 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 123
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 124 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 181
Query: 425 VIQSAL 430
VIQ L
Sbjct: 182 VIQRIL 187
>gi|158828185|gb|ABW81064.1| AlMpt5-2 [Arabidopsis lyrata subsp. lyrata]
Length = 949
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 146/288 (50%), Gaps = 45/288 (15%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G++V + DQYG R +Q+ + + +E M++ E++ + LM D FGNYV+QK
Sbjct: 634 LSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFGNYVIQKA 693
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E+ +Q+ +++ L + H +R V
Sbjct: 694 IEVVDLDQKIKMVKEL------------DGHVMRCV------------------------ 717
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+D NG++V+Q C++ E+ +++++ N ++T GC V+Q +E+
Sbjct: 718 ----RDQNGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPD 773
Query: 328 RE-RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
+ +++ EI++ +LA+D YGNYV+QH+L P ++++L G V S K+ SN
Sbjct: 774 TQSKVMDEIMSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASN 833
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
VVE+CL G E+ ++ E+L + + + ++ F NYV+Q L
Sbjct: 834 VVEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL 881
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S++ + L+E+A + ++D+ G +Q +E + ++ + EI+ AL L D +
Sbjct: 626 SNKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVF 685
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYV+Q + + ++++L+GH + ++ G++VV++C +E E++ II
Sbjct: 686 GNYVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHVVQKC-IECVPEENIEFIIST 744
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
NV L HP+G VIQ L
Sbjct: 745 FFG-NVVTLSTHPYGCRVIQRVL 766
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 86/186 (46%), Gaps = 3/186 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
+LE + + L+ + V + D G IQ ++ + ++ + E+
Sbjct: 620 MLEEFKSNKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALA 679
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q +E Q+ ++V E+ + + D GN+VVQ + +
Sbjct: 680 LMTDVFGNYVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIE 739
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGE-EQSTRIIIELLRSPNVSMLLMHPFGNY 424
++ G+ V+ S + YG V++R L + + ++++ E++ + +SML +GNY
Sbjct: 740 FIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMDEIMST--ISMLAQDQYGNY 797
Query: 425 VIQSAL 430
VIQ L
Sbjct: 798 VIQHVL 803
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 368 LRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQ 427
L ++ GH V FS ++YGS +++ L + ++ + E++ P L+ FGNYVIQ
Sbjct: 634 LSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIM--PQALALMTDVFGNYVIQ 691
Query: 428 SALLV 432
A+ V
Sbjct: 692 KAIEV 696
>gi|332254530|ref|XP_003276382.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1 [Nomascus
leucogenys]
Length = 1222
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 155/292 (53%), Gaps = 9/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LR++ G+I+ ++DQ+G R + M E +++F E++ LM+D FG+YV+QK
Sbjct: 882 LREIAGHIMEFSQDQHGSRFISXKMERATPAERQLVFNEILQAAYPLMVDVFGHYVIQKF 941
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 942 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRE-LDGHV 997
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+ Q
Sbjct: 998 LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQ 1057
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SNV
Sbjct: 1058 TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNV 1117
Query: 388 VERCLLESGEEQSTRIIIELLR---SPNVSMLLM--HPFGNYVIQSALLVSK 434
VE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 1118 VEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1169
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 127/249 (51%), Gaps = 15/249 (6%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG++++LA YGCR +Q+ + +P ++ + E+ V + + D GN+VVQK +E
Sbjct: 957 IRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIE- 1015
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAV 268
C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L
Sbjct: 1016 CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQHTE 1070
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
L +D G+YVIQ+ ++H ED ++ E+ N ++ K V++ CV ++ +R
Sbjct: 1071 QLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTER 1130
Query: 329 ERLVAEIIA------NALL-LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ +AL + +D Y NYVVQ ++ + P ++ ++ H +
Sbjct: 1131 AVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKY 1190
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 1191 TYGKHILAK 1199
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G I ++ + + + + NE+ Y
Sbjct: 867 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFISXKMERATPAERQLVFNEILQAAY 926
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 927 PLMVDVFGHYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 986
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 987 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 1044
Query: 425 VIQSAL 430
VIQ L
Sbjct: 1045 VIQRIL 1050
>gi|14277944|pdb|1IB2|A Chain A, Crystal Structure Of A Pumilio-Homology Domain
gi|23200484|pdb|1M8Z|A Chain A, Crystal Structure Of A Pumilio-Homology Domain
gi|24159005|pdb|1M8W|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-19 Rna
gi|24159006|pdb|1M8W|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-19 Rna
gi|24159011|pdb|1M8X|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-14 Rna
gi|24159012|pdb|1M8X|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-14 Rna
gi|24159015|pdb|1M8Y|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre2-10 Rna
gi|24159016|pdb|1M8Y|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre2-10 Rna
gi|326327989|pdb|3Q0L|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nrea
gi|326327990|pdb|3Q0L|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nrea
gi|326327993|pdb|3Q0M|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nreb
gi|326327994|pdb|3Q0M|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nreb
gi|326327997|pdb|3Q0N|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
gi|326327998|pdb|3Q0N|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
gi|326328001|pdb|3Q0O|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
gi|326328002|pdb|3Q0O|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
gi|326328005|pdb|3Q0P|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Hunchback Nre
gi|326328006|pdb|3Q0P|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Hunchback Nre
Length = 349
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 157/293 (53%), Gaps = 9/293 (3%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 18 QLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQK 77
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 78 FFEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMV-RELDGH 133
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 134 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 193
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YGNYV+QH+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 194 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 253
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLMHP--FGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 254 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 306
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 134/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 72 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELD 131
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 132 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 186
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P Q +L L L +D G+YVIQ+ ++H ED ++ E+ N +
Sbjct: 187 LEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL 245
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 246 SQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 305
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 306 EPGQRKIVMHKIRPHIATLRKYTYGKHILAK 336
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 4 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 63
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 64 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 123
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 124 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 181
Query: 425 VIQSAL 430
VIQ L
Sbjct: 182 VIQRIL 187
>gi|353234912|emb|CCA66932.1| hypothetical protein PIIN_00770 [Piriformospora indica DSM 11827]
Length = 832
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 154/293 (52%), Gaps = 11/293 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI-DRVCELMIDPFGNYVVQK 206
L+D+ G++V +KDQ+G R +Q +++ + M++ E+I + V + FGNYV+Q+
Sbjct: 467 LQDIAGHVVEFSKDQHGSRFIQHKLTTATEANRNMVYREIIPNHVISSAQNVFGNYVLQR 526
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L EL + E+R I L +V + L+ +G R + K+++ L +Q V A L
Sbjct: 527 LCELGTPEERASIARTLQG---HIVMLSLDIYGCRVLQKMIDYLGAAEQAHWV-AELHGH 582
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++VIQ ++ D +N + + +AT GC VLQ C E+ +
Sbjct: 583 ILQCVKDANGNHVIQKFLES-PLSDHSLFVNTFKTHVFEMATHPYGCRVLQRCFEHVEPE 641
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
L+ E+ L L +D YGNYV+Q +L +++ L GH + S +KY SN
Sbjct: 642 LTRPLLNEMHLRTLELMQDQYGNYVMQFILEKGSSHDRTRVIQALTGHMLPMSKHKYASN 701
Query: 387 VVERCLLESGEEQSTRIIIEL-LRSPN----VSMLLMHPFGNYVIQSALLVSK 434
V E+ +L EQ +I E+ ++ P+ + ++ F NYV+Q AL V++
Sbjct: 702 VCEKAILNGTVEQRRPLIEEISVQRPDGMNPIITMIKDQFANYVLQRALEVAE 754
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 98/219 (44%), Gaps = 12/219 (5%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
S R L+G+IV L+ D YGCR LQ+ + L E E+ + + + D GN+V+
Sbjct: 537 ASIARTLQGHIVMLSLDIYGCRVLQKMIDYLGAAEQAHWVAELHGHILQCVKDANGNHVI 596
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QK +E + L + + + + +G R + + E++ P+ +L +
Sbjct: 597 QKFLESPLSDHS----LFVNTFKTHVFEMATHPYGCRVLQRCFEHV-EPELTRPLLNEMH 651
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+ L +D G+YV+Q+ ++ S D ++ + + ++ K V + +
Sbjct: 652 LRTLELMQDQYGNYVMQFILEKGSSHDRTRVIQALTGHMLPMSKHKYASNVCEKAILNGT 711
Query: 325 GAQRERLVAEI-------IANALLLAEDCYGNYVVQHLL 356
QR L+ EI + + + +D + NYV+Q L
Sbjct: 712 VEQRRPLIEEISVQRPDGMNPIITMIKDQFANYVLQRAL 750
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALL-LAEDCYGN 349
+ ++ L ++A + + D+ G +QH + + A R + EII N ++ A++ +GN
Sbjct: 462 NKRWDLQDIAGHVVEFSKDQHGSRFIQHKLTTATEANRNMVYREIIPNHVISSAQNVFGN 521
Query: 350 YVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLR 409
YV+Q L L P+ AS+ R L+GH V S + YG V+++ + G + + EL
Sbjct: 522 YVLQRLCELGTPEERASIARTLQGHIVMLSLDIYGCRVLQKMIDYLGAAEQAHWVAELHG 581
Query: 410 SPNVSMLLMHPFGNYVIQSAL 430
++ + GN+VIQ L
Sbjct: 582 --HILQCVKDANGNHVIQKFL 600
>gi|410730377|ref|XP_003671368.2| hypothetical protein NDAI_0G03480 [Naumovozyma dairenensis CBS 421]
gi|401780186|emb|CCD26125.2| hypothetical protein NDAI_0G03480 [Naumovozyma dairenensis CBS 421]
Length = 828
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 167/322 (51%), Gaps = 46/322 (14%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEI--EMIFVEVIDRVCELMIDPFGNYVVQ 205
L+DL N + LA DQ+GCR LQ+ + S + +I ++++ E+ EL++DPFGNY++Q
Sbjct: 182 LKDL--NYLKLATDQFGCRFLQKKLESPAESDIVRDLMYEEIKPYFLELILDPFGNYLIQ 239
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
KL + + +QRT ++ + + FQ I +N +G R++ ++++ + N +Q ++++
Sbjct: 240 KLCDYLTVDQRTNLIKSIYPNVFQ---ISINQYGTRSLQRIIDTVDNDEQSNIIIEGFSQ 296
Query: 266 G------AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVAD--NCYGIATDKSGCCVLQ 317
VTL D NG++VIQ C+ F ++++ + + N I+T K GCCVLQ
Sbjct: 297 KYTSIEQIVTLINDLNGNHVIQKCIFKFPPSTFDFIIDTITEQNNIVAISTHKHGCCVLQ 356
Query: 318 HCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALR------VPQITASLLRQL 371
+ Q ++ ++I L D +GNY++Q LL + +P+I +L +L
Sbjct: 357 KLLSVCTLDQIFKISVKLIQFLPALINDQFGNYIIQFLLDINEIDYYFLPEIFNTLSNEL 416
Query: 372 EGHYVSFSCNKYGSNVVERCL--------------------LES-GEEQSTRIIIELLRS 410
SC K+ SNVVE+ + LE G + + I + +
Sbjct: 417 ----CQLSCLKFSSNVVEKFIKKLFSNVRYQLQMNNIDANTLEVLGTSMNILLSIVDIFT 472
Query: 411 PNVSMLLMHPFGNYVIQSALLV 432
N+++L+ +GNY +Q+ L V
Sbjct: 473 INLNILIRDNYGNYALQTLLDV 494
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 105/227 (46%), Gaps = 12/227 (5%)
Query: 227 DFQLVRICLNTHGIRAVLKLLENLTNPQQI-SLVLAALRPGAVTLTKDTNGHYVIQYCVK 285
D +++ + G R + K LE+ + L+ ++P + L D G+Y+IQ
Sbjct: 184 DLNYLKLATDQFGCRFLQKKLESPAESDIVRDLMYEEIKPYFLELILDPFGNYLIQKLCD 243
Query: 286 HFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAE-------IIAN 338
+ + + L+ + N + I+ ++ G LQ ++ ++ ++ E I
Sbjct: 244 YLTVDQRTNLIKSIYPNVFQISINQYGTRSLQRIIDTVDNDEQSNIIIEGFSQKYTSIEQ 303
Query: 339 ALLLAEDCYGNYVVQHLLALRVPQITASLLRQL--EGHYVSFSCNKYGSNVVERCLLESG 396
+ L D GN+V+Q + P ++ + + + V+ S +K+G V+++ L
Sbjct: 304 IVTLINDLNGNHVIQKCIFKFPPSTFDFIIDTITEQNNIVAISTHKHGCCVLQKLLSVCT 363
Query: 397 EEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSSPPI 443
+Q +I ++L++ + L+ FGNY+IQ L ++++ + P I
Sbjct: 364 LDQIFKISVKLIQF--LPALINDQFGNYIIQFLLDINEIDYYFLPEI 408
>gi|429848383|gb|ELA23874.1| mRNA binding protein pumilio [Colletotrichum gloeosporioides Nara
gc5]
Length = 853
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 151/289 (52%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ ++V + DQ+G R +Q+ + + +E + +F E+ +LM D FGNYV+QK
Sbjct: 463 LKDIYSHVVEFSGDQHGSRFIQQKLETANSDEKDQVFREIEPNAIQLMKDVFGNYVIQKF 522
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + ++V + + + R V K LE++ QQ LV L P
Sbjct: 523 FEHGNQVQKKVLASQMKG---KVVDLSMQMYACRVVQKALEHVLVEQQAELV-KELEPEI 578
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V + KD NG++V+Q ++ ++++ +A+ C V+Q +EY
Sbjct: 579 VKVVKDQNGNHVVQKIIELVPRHYINFIMDSFRGQVSTLASHMYACRVIQRMLEYGTEQD 638
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+E ++ E+ + L D YGNYVVQH++ P+ + +++ + V+ S +K+ SNV
Sbjct: 639 KETILGELHNSTQSLITDQYGNYVVQHIIEHGKPEDRSRIIQLVISQLVTLSKHKFASNV 698
Query: 388 VERCLLESGEEQSTRIIIELLRS------PNVSMLLMHPFGNYVIQSAL 430
VE+C ++ G + + I E + S ++ +++ +GNYVIQ L
Sbjct: 699 VEKC-IQFGTAEERKGIREQITSQASDGTSSLQLMMKDQYGNYVIQKLL 746
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S + +Y L ++ + + D+ G +Q +E + +++++ EI NA+ L +D +
Sbjct: 455 SKSNKRYELKDIYSHVVEFSGDQHGSRFIQQKLETANSDEKDQVFREIEPNAIQLMKDVF 514
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYV+Q L Q++G V S Y VV++ L EQ ++ EL
Sbjct: 515 GNYVIQKFFEHGNQVQKKVLASQMKGKVVDLSMQMYACRVVQKALEHVLVEQQAELVKEL 574
Query: 408 LRSPNVSMLLMHPFGNYVIQ 427
P + ++ GN+V+Q
Sbjct: 575 --EPEIVKVVKDQNGNHVVQ 592
>gi|302765685|ref|XP_002966263.1| hypothetical protein SELMODRAFT_86145 [Selaginella moellendorffii]
gi|300165683|gb|EFJ32290.1| hypothetical protein SELMODRAFT_86145 [Selaginella moellendorffii]
Length = 324
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 149/280 (53%), Gaps = 9/280 (3%)
Query: 156 VALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQ 215
V + DQ+G R +Q+ + + E+ M+F EV + LM D FGNYV+QK E + +Q
Sbjct: 3 VHCSADQHGSRFIQQKLETATAEDKAMVFQEVFPQAVALMTDVFGNYVIQKFFEHGTAQQ 62
Query: 216 RTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTN 275
R + L + +++ + L +G R + K LE + QQ LV + L + +D N
Sbjct: 63 RKELAQQLPS---RVLTLSLQMYGCRVIQKALEVVDVDQQTQLV-SELDGHVMRCVRDQN 118
Query: 276 GHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER-LVAE 334
G++VIQ C++ + ++++ ++T GC V+Q +E+ Q+++ ++ E
Sbjct: 119 GNHVIQKCIECVPPDRIQFIICAFYGQVLALSTHPYGCRVIQRVLEHCTDEQKQQGIMQE 178
Query: 335 IIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLE 394
I+ + LA+D YGNYVVQH+L + ++ +L G V S +K+ SNV+E+CL
Sbjct: 179 ILRSTCSLAQDQYGNYVVQHVLEHGTQPERSEIITKLAGQIVQMSQHKFASNVIEKCLQF 238
Query: 395 SGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSAL 430
G + +I E+L S + + ++ F NYV+Q L
Sbjct: 239 GGPAERQILINEMLGSTDENEALQAMMKDQFANYVVQKVL 278
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 126/248 (50%), Gaps = 9/248 (3%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ L ++ L+ YGCR +Q+ + + ++ + E+ V + D GN+V+QK +
Sbjct: 68 QQLPSRVLTLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGHVMRCVRDQNGNHVIQKCI 127
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
E + RI ++ Q++ + + +G R + ++LE+ T+ Q+ ++ +
Sbjct: 128 ECVPPD---RIQFIICAFYGQVLALSTHPYGCRVIQRVLEHCTDEQKQQGIMQEILRSTC 184
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
+L +D G+YV+Q+ ++H + + ++ ++A ++ K V++ C+++ A+R
Sbjct: 185 SLAQDQYGNYVVQHVLEHGTQPERSEIITKLAGQIVQMSQHKFASNVIEKCLQFGGPAER 244
Query: 329 ERLVAEIIA----NALLLA--EDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+ L+ E++ N L A +D + NYVVQ +L + + LL +++ H +
Sbjct: 245 QILINEMLGSTDENEALQAMMKDQFANYVVQKVLEICDDRQREILLTRIKVHLHALKKYT 304
Query: 383 YGSNVVER 390
YG ++V R
Sbjct: 305 YGKHIVAR 312
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Query: 303 CYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ 362
C + D+ G +Q +E + + + E+ A+ L D +GNYV+Q Q
Sbjct: 2 CVHCSADQHGSRFIQQKLETATAEDKAMVFQEVFPQAVALMTDVFGNYVIQKFFEHGTAQ 61
Query: 363 ITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFG 422
L +QL ++ S YG V+++ L +Q T+++ EL +V + G
Sbjct: 62 QRKELAQQLPSRVLTLSLQMYGCRVIQKALEVVDVDQQTQLVSEL--DGHVMRCVRDQNG 119
Query: 423 NYVIQSAL 430
N+VIQ +
Sbjct: 120 NHVIQKCI 127
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G IV +++ ++ +++ + E +++ E++ E +M D F N
Sbjct: 212 ITKLAGQIVQMSQHKFASNVIEKCLQFGGPAERQILINEMLGSTDENEALQAMMKDQFAN 271
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E+C + QR +L + L + H + V KL+
Sbjct: 272 YVVQKVLEICDDRQREILLTRIKVHLHALKKYTYGKHIVARVEKLV 317
>gi|407037210|gb|EKE38557.1| pumilio family RNA-binding protein [Entamoeba nuttalli P19]
Length = 438
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 145/274 (52%), Gaps = 8/274 (2%)
Query: 158 LAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRT 217
L KDQ G R +Q+ +EEI+ IF + ELMID FGNYV+QKLVE + +
Sbjct: 125 LCKDQQGSRKIQQFFEIATEEEIDQIFRLIYSDSIELMIDLFGNYVIQKLVEHGT---KK 181
Query: 218 RILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGH 277
+ L+ +V++ L+ +G R + K++E L+ P+++ ++ + ++ T +D NG+
Sbjct: 182 HVHLLFEKLQGNVVKLSLHMYGCRVIQKIIEVLS-PEEVRIISSEIKSNVSTFIEDQNGN 240
Query: 278 YVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA 337
+VIQ + S D ++++E+ + GC V+Q +E + +R+ +++
Sbjct: 241 HVIQKFIDFASEIDLNFMIDEIYTKAVEYSKHPYGCRVIQRLIEKNSQNCVKRVTDKLVE 300
Query: 338 NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGE 397
L+ + YGNYV+QHL+ + ++ ++G +S KY SNVVE+C+
Sbjct: 301 YVWELSINQYGNYVIQHLIQYGTNEQRVEIVNNIKGKLYEYSMKKYSSNVVEKCIRCCET 360
Query: 398 EQSTRIIIELLRS----PNVSMLLMHPFGNYVIQ 427
+ ++ EL S ++ ++ P+ NYVIQ
Sbjct: 361 REQIILVNELCNSNVTNKQINEMICDPYANYVIQ 394
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 106/218 (48%), Gaps = 12/218 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+GN+V L+ YGCR +Q+ + L EE+ +I E+ V + D GN+V+QK
Sbjct: 187 FEKLQGNVVKLSLHMYGCRVIQKIIEVLSPEEVRIISSEIKSNVSTFIEDQNGNHVIQKF 246
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
++ SE + M+ + V + +G R + +L+E N Q + V L
Sbjct: 247 IDFASE---IDLNFMIDEIYTKAVEYSKHPYGCRVIQRLIEK--NSQNCVKRVTDKLVEY 301
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L+ + G+YVIQ+ +++ ++E ++N + Y + K V++ C+ +
Sbjct: 302 VWELSINQYGNYVIQHLIQYGTNEQRVEIVNNIKGKLYEYSMKKYSSNVVEKCIRCCETR 361
Query: 327 QRERLVAEI----IANALL--LAEDCYGNYVVQHLLAL 358
++ LV E+ + N + + D Y NYV+Q L+ +
Sbjct: 362 EQIILVNELCNSNVTNKQINEMICDPYANYVIQRLIEM 399
>gi|303280035|ref|XP_003059310.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459146|gb|EEH56442.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 429
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 149/298 (50%), Gaps = 20/298 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L DL ++V + DQ+G R +Q+ + + E+ +++F EV+ LM D FGNYVVQK
Sbjct: 18 LGDLAEHVVEFSSDQHGSRFIQQKLETAAPEDAQLVFDEVLPAAHALMTDVFGNYVVQKF 77
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+ + EQ I L ++ + L +G R + K LE + Q +LV A L
Sbjct: 78 LANGTPEQIDAIAGELKG---HVLSLSLQMYGCRVIQKALEVIDEDAQCALV-AELEGHV 133
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGC---------CVLQH 318
+D NG++V+Q C++ + ++++ N ++T GC VL+H
Sbjct: 134 SRCVRDQNGNHVVQKCIECVAPAKIQFIVEAFYGNVLSLSTHPYGCRVIQARSIHWVLEH 193
Query: 319 CVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSF 378
C K E ++ EI+ A LA+D YGNYVVQH+L ++L+ L G V
Sbjct: 194 CTPEQKS---EGIMDEILREATSLAQDQYGNYVVQHVLQHGGEGERKTILQTLAGQIVLL 250
Query: 379 SCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN----VSMLLMHPFGNYVIQSALLV 432
+ +K+ SNV+E+CL G + +I E+L + + ++ F NYV+Q L V
Sbjct: 251 AQHKFASNVIEKCLTYCGASERQIMIDEMLGKTDENEPLQAMMKDQFANYVVQKLLEV 308
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 124/254 (48%), Gaps = 18/254 (7%)
Query: 150 DLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
+L+G++++L+ YGCR +Q+ + + ++ + E+ V + D GN+VVQK +E
Sbjct: 92 ELKGHVLSLSLQMYGCRVIQKALEVIDEDAQCALVAELEGHVSRCVRDQNGNHVVQKCIE 151
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTH-------GIRAVLKLLENLTNPQQISLVLAA 262
C + + ++ + F + L+TH R++ +LE+ T Q+ ++
Sbjct: 152 -CVAPAKIQFIV----EAFYGNVLSLSTHPYGCRVIQARSIHWVLEHCTPEQKSEGIMDE 206
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
+ A +L +D G+YV+Q+ ++H + K +L +A +A K V++ C+ Y
Sbjct: 207 ILREATSLAQDQYGNYVVQHVLQHGGEGERKTILQTLAGQIVLLAQHKFASNVIEKCLTY 266
Query: 323 SKGAQRERLVAEIIANA------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYV 376
++R+ ++ E++ + +D + NYVVQ LL + LL ++ H
Sbjct: 267 CGASERQIMIDEMLGKTDENEPLQAMMKDQFANYVVQKLLEVCDDGQRDQLLTRMRVHLG 326
Query: 377 SFSCNKYGSNVVER 390
+ YG ++V R
Sbjct: 327 NLKKFTYGKHIVAR 340
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 2/183 (1%)
Query: 246 LLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG 305
LLE N + L L V + D +G IQ ++ + ED + + +EV +
Sbjct: 4 LLEEFKNNKARRFELGDLAEHVVEFSSDQHGSRFIQQKLETAAPEDAQLVFDEVLPAAHA 63
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+ TD G V+Q + Q + + E+ + L L+ YG V+Q L +
Sbjct: 64 LMTDVFGNYVVQKFLANGTPEQIDAIAGELKGHVLSLSLQMYGCRVIQKALEVIDEDAQC 123
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
+L+ +LEGH ++ G++VV++C +E + I+E NV L HP+G V
Sbjct: 124 ALVAELEGHVSRCVRDQNGNHVVQKC-IECVAPAKIQFIVEAFYG-NVLSLSTHPYGCRV 181
Query: 426 IQS 428
IQ+
Sbjct: 182 IQA 184
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 71/138 (51%), Gaps = 2/138 (1%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
++ L ++A++ ++D+ G +Q +E + + + E++ A L D +GNYVV
Sbjct: 15 RFELGDLAEHVVEFSSDQHGSRFIQQKLETAAPEDAQLVFDEVLPAAHALMTDVFGNYVV 74
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q LA P+ ++ +L+GH +S S YG V+++ L E+ ++ EL +
Sbjct: 75 QKFLANGTPEQIDAIAGELKGHVLSLSLQMYGCRVIQKALEVIDEDAQCALVAEL--EGH 132
Query: 413 VSMLLMHPFGNYVIQSAL 430
VS + GN+V+Q +
Sbjct: 133 VSRCVRDQNGNHVVQKCI 150
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
L+ L G IV LA+ ++ +++ ++ E +++ E++ + E +M D F N
Sbjct: 240 LQTLAGQIVLLAQHKFASNVIEKCLTYCGASERQIMIDEMLGKTDENEPLQAMMKDQFAN 299
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQKL+E+C + QR ++L + L + H + V K +
Sbjct: 300 YVVQKLLEVCDDGQRDQLLTRMRVHLGNLKKFTYGKHIVARVEKFV 345
>gi|407834788|gb|EKF99041.1| pumilio protein, putative [Trypanosoma cruzi]
Length = 827
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 166/324 (51%), Gaps = 28/324 (8%)
Query: 108 NFDGLRSNGNELSSVPRNQWMSSLSLKRNQWLQDSFDCS----SLRDLRGNIVALAKDQY 163
N G++ +G VP ++ + S + ++ D+ + + + + G V A+DQ
Sbjct: 367 NPAGVKPSGR---GVPYSEPLQPRSARLEEFRVDAMNGTIGHWRISHILGYAVEFAQDQE 423
Query: 164 GCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLML 223
G R +QR + S +E++ +F E+ + L+ D FGNYV+QKL+E+ + Q L
Sbjct: 424 GSRFIQRAVESATHDEVDALFHEIFESPLVLVTDIFGNYVLQKLLEVGNARQLAHAATRL 483
Query: 224 TNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYC 283
N+ +V + L T+G R + K +E + P+ + ++LA L+ +D NG++V+Q C
Sbjct: 484 QNN---VVSLTLQTYGCRVIQKCIE-VMPPEGLDIILAELKGNVAKCIQDQNGNHVVQKC 539
Query: 284 VKHFSHEDTKYLLNEVADNCYGIATDKSGC----CVLQHCVEYSKGAQRERLVAEIIANA 339
V+ + + ++++ +AT GC C++QHC + Q E + +EI+
Sbjct: 540 VE-VTPQRCGFIVSAFTGRVMELATHAYGCRVIQCIMQHCPD-----QEEVIFSEILKCV 593
Query: 340 LLLAEDCYGNYVVQHLLA-LRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEE 398
LA+D YGNYV+QH+L ++ + L+ + FS K+ SNV+E+ + + E
Sbjct: 594 DTLAKDQYGNYVIQHVLQHMKDENKVTRVFNALKDDFYEFSKQKFASNVMEKIFVRADPE 653
Query: 399 QSTRII------IELLRSPNVSML 416
Q +I +E L +P V +L
Sbjct: 654 QRMELIQKLCAPVEGLETPPVEVL 677
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 136/294 (46%), Gaps = 25/294 (8%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L+ N+V+L YGCR +Q+ + +P E +++I E+ V + + D GN+VVQK VE+
Sbjct: 483 LQNNVVSLTLQTYGCRVIQKCIEVMPPEGLDIILAELKGNVAKCIQDQNGNHVVQKCVEV 542
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ R +++ +++ + + +G R + ++++ P Q ++ + + TL
Sbjct: 543 TPQ----RCGFIVSAFTGRVMELATHAYGCRVIQCIMQHC--PDQEEVIFSEILKCVDTL 596
Query: 271 TKDTNGHYVIQYCVKHFSHED-TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
KD G+YVIQ+ ++H E+ + N + D+ Y + K V++ + QR
Sbjct: 597 AKDQYGNYVIQHVLQHMKDENKVTRVFNALKDDFYEFSKQKFASNVMEKIFVRADPEQRM 656
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVE 389
L+ ++ A L V+ L R+P + + Y K G E
Sbjct: 657 ELIQKLCAPVEGLETPP-----VEVLAFKRLPPVKKEEAEKQRNGYA-----KKGRRDKE 706
Query: 390 RCLLESGEEQSTRIIIEL----LRSPNVSMLLMH-PFGNYVIQSALLVSKVRLF 438
R E +E + +IE+ +P++ L+M PF NYV Q L + V F
Sbjct: 707 R---EREKESAGGPVIEVHSDGKEAPSMLCLMMQNPFANYVAQRVLDAADVDQF 757
>gi|302692892|ref|XP_003036125.1| hypothetical protein SCHCODRAFT_51963 [Schizophyllum commune H4-8]
gi|300109821|gb|EFJ01223.1| hypothetical protein SCHCODRAFT_51963 [Schizophyllum commune H4-8]
Length = 361
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 158/294 (53%), Gaps = 13/294 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI-DRVCELMIDPFGNYVVQK 206
LRD+ G IV + DQ+G R +Q+ + + EE +++F E++ D +L+ D FGNYV+QK
Sbjct: 33 LRDIFGYIVEFSGDQHGSRFIQQKLETASTEEKQIVFDEIVPDNALQLIQDVFGNYVIQK 92
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L E ++ Q+T ++ + + ++ + L +G R V K +E + P+Q + L
Sbjct: 93 LFEHGTQVQKT---VLASTMEGHILPLSLQMYGCRVVQKAIECIL-PEQQGAFVRELEAH 148
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++VIQ ++ + +++ + N Y ++T GC VLQ +E+
Sbjct: 149 VLKCVKDANGNHVIQKLIERVPADRLQFV-STFRGNVYDLSTHPYGCRVLQRSLEHLPHD 207
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
L+ E+ L LA+D +GNYVVQ ++ P A +L Q+ G ++ + +K+ SN
Sbjct: 208 MTYPLMDELHKYVLNLAQDQFGNYVVQFVIEHGSPTDKALVLNQMRGQILALARHKFASN 267
Query: 387 VVERCLLESGEEQSTRIIIELLR------SPNVSMLLMHPFGNYVIQSALLVSK 434
V E+ L+ + E +I E++ SP V M + F NYV+Q AL ++
Sbjct: 268 VCEKALVFADSETRAHLIDEIMMPTADGVSPLVIM-MKDQFANYVLQRALATAE 320
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 99/234 (42%), Gaps = 51/234 (21%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+ G+I+ L+ YGCR +Q+ + + E+ E+ V + + D GN+V+QKL+E
Sbjct: 109 MEGHILPLSLQMYGCRVVQKAIECILPEQQGAFVRELEAHVLKCVKDANGNHVIQKLIER 168
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ R + + + + L + +G R + + LE+L + L + L + L
Sbjct: 169 VPAD-RLQFVSTFRGNVYDL---STHPYGCRVLQRSLEHLPHDMTYPL-MDELHKYVLNL 223
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK--SGCC-------------- 314
+D G+YV+Q+ ++H S D +LN++ +A K S C
Sbjct: 224 AQDQFGNYVVQFVIEHGSPTDKALVLNQMRGQILALARHKFASNVCEKALVFADSETRAH 283
Query: 315 ---------------------------VLQHCVEYSKGAQRERLVAEI---IAN 338
VLQ + ++G Q+E L+A++ IAN
Sbjct: 284 LIDEIMMPTADGVSPLVIMMKDQFANYVLQRALATAEGEQKEMLIAKVKPHIAN 337
>gi|389629662|ref|XP_003712484.1| hypothetical protein MGG_04985 [Magnaporthe oryzae 70-15]
gi|351644816|gb|EHA52677.1| hypothetical protein MGG_04985 [Magnaporthe oryzae 70-15]
Length = 888
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 148/289 (51%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ +V + DQ+G R +Q + + +E + IF E+ +LM D FGNYV+QK
Sbjct: 490 LKDIYNYVVEFSGDQHGSRFIQSKLETANSDEKDQIFKELEPNAVQLMKDVFGNYVIQKF 549
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + ++V + + R V K LE++ QQ LV L
Sbjct: 550 FEHGNQVQKKALASQMKG---KMVSLSTEMYACRVVQKALEHVLVEQQAELV-KELEVEI 605
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
V + KD NG++V+Q ++ + ++++ + ++ GC V+Q +E+ A
Sbjct: 606 VRIIKDANGNHVVQKIIELVPRQYISFVMDSIRGQVIQLSQHNYGCRVIQRMMEHGSDAD 665
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ ++ E+ +A +L D YGNYV+QH++ P+ ++ + G V S +K SNV
Sbjct: 666 KATIMHELHQHAPMLTTDPYGNYVIQHIITHGKPEDRQKVISIVLGQIVLLSKHKLASNV 725
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVS------MLLMHPFGNYVIQSAL 430
VERC++ SG + I +++ +P + +++ + NYV+Q L
Sbjct: 726 VERCIV-SGTAEDRTAIRKIITTPGIDGTSPLQLMMKDQYANYVVQKLL 773
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
KY L ++ + + D+ G +Q +E + +++++ E+ NA+ L +D +GNYV+
Sbjct: 487 KYELKDIYNYVVEFSGDQHGSRFIQSKLETANSDEKDQIFKELEPNAVQLMKDVFGNYVI 546
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q +L Q++G VS S Y VV++ L EQ ++ EL
Sbjct: 547 QKFFEHGNQVQKKALASQMKGKMVSLSTEMYACRVVQKALEHVLVEQQAELVKEL--EVE 604
Query: 413 VSMLLMHPFGNYVIQ 427
+ ++ GN+V+Q
Sbjct: 605 IVRIIKDANGNHVVQ 619
>gi|342184736|emb|CCC94218.1| putative RNA-binding protein [Trypanosoma congolense IL3000]
Length = 830
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 138/257 (53%), Gaps = 15/257 (5%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G V A+DQ G R +QR + S +E++ +F E+ + EL++D FGNYV+QKL+E+ +
Sbjct: 416 GYAVEFAQDQEGSRFIQRAVESATSDEVDALFREIFESPLELVVDIFGNYVLQKLLEIGN 475
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
Q L N+ +V + L T+G R + K +E + P+ + ++LA L+ +
Sbjct: 476 ARQLAYAATRLQNN---VVSLTLQTYGCRVIQKCIE-VMPPEGLDIILAELKGNVAKCIQ 531
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGC----CVLQHCVEYSKGAQR 328
D NG++V+Q CV+ ++++ + +AT GC C++ HC + Q
Sbjct: 532 DQNGNHVVQKCVEVIPQR-CGFIVSVFSGRVMELATHAYGCRVIQCIMDHCPD-----QE 585
Query: 329 ERLVAEIIANALLLAEDCYGNYVVQHLLA-LRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
E + +E++ LA D YGNYV+QH+L +R + L+G++ FS K+ SNV
Sbjct: 586 EAIFSELLQCVGTLATDQYGNYVIQHVLQRVRDDDKVGRIFDALKGNFYEFSKQKFASNV 645
Query: 388 VERCLLESGEEQSTRII 404
+E+ ++ +Q +I
Sbjct: 646 MEKVFAQANAQQRMELI 662
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 90/183 (49%), Gaps = 7/183 (3%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L+ N+V+L YGCR +Q+ + +P E +++I E+ V + + D GN+VVQK VE+
Sbjct: 486 LQNNVVSLTLQTYGCRVIQKCIEVMPPEGLDIILAELKGNVAKCIQDQNGNHVVQKCVEV 545
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ R +++ +++ + + +G R + ++++ P Q + + L TL
Sbjct: 546 IPQ----RCGFIVSVFSGRVMELATHAYGCRVIQCIMDHC--PDQEEAIFSELLQCVGTL 599
Query: 271 TKDTNGHYVIQYCVKHFSHED-TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
D G+YVIQ+ ++ +D + + + N Y + K V++ + QR
Sbjct: 600 ATDQYGNYVIQHVLQRVRDDDKVGRIFDALKGNFYEFSKQKFASNVMEKVFAQANAQQRM 659
Query: 330 RLV 332
L+
Sbjct: 660 ELI 662
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
A D+ G +Q VE + + + L EI + L L D +GNYV+Q LL + + A
Sbjct: 421 FAQDQEGSRFIQRAVESATSDEVDALFREIFESPLELVVDIFGNYVLQKLLEIGNARQLA 480
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYV 425
+L+ + VS + YG V+++C +E + II+ L+ NV+ + GN+V
Sbjct: 481 YAATRLQNNVVSLTLQTYGCRVIQKC-IEVMPPEGLDIILAELKG-NVAKCIQDQNGNHV 538
Query: 426 IQSALLV 432
+Q + V
Sbjct: 539 VQKCVEV 545
>gi|115386338|ref|XP_001209710.1| hypothetical protein ATEG_07024 [Aspergillus terreus NIH2624]
gi|114190708|gb|EAU32408.1| hypothetical protein ATEG_07024 [Aspergillus terreus NIH2624]
Length = 882
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 153/306 (50%), Gaps = 28/306 (9%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G++V + DQ+G R +Q+ + + +E E +F E+ +LM D FGNYVVQKL
Sbjct: 484 LKDIYGHVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIKGDCLQLMTDVFGNYVVQKL 543
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + +V + L +G R V K LE++ QQ ++V L
Sbjct: 544 FEHGNQTQKKVLANQMKG---HIVMLSLQMYGCRVVQKALEHILTDQQAAMV-KELEGHV 599
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ ++ E ++++N+ + +A GC V+Q +E+ K
Sbjct: 600 IKCVRDQNGNHVIQKAIERVPSEHIQFIMNDFRGSVDKLAAHPYGCRVIQRMLEHCKEED 659
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
RE ++ E+ + L D +GNYV+QH++ + ++ + + ++FS +K+ SNV
Sbjct: 660 RESILGELHSCTAKLIPDQFGNYVIQHVITNGQEKDRTRMITVVMSNLLNFSKHKFASNV 719
Query: 388 VERCLLESGEEQSTRIIIELLRSPN-----------------------VSMLLMHPFGNY 424
VE+ +E G +I+ L P+ + ++ +GNY
Sbjct: 720 VEKS-IEFGTLSQREVIVRTLVFPHDEDFTLLEGSKKPVDINDERLKPLEGVIRDQYGNY 778
Query: 425 VIQSAL 430
VIQ L
Sbjct: 779 VIQKIL 784
>gi|123509694|ref|XP_001329922.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
gi|121912972|gb|EAY17787.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
Length = 408
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 146/281 (51%), Gaps = 11/281 (3%)
Query: 156 VALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQ 215
V +AKD+ C LQ ++ E + IF + + EL+ D N+V+QKL E +EEQ
Sbjct: 91 VKMAKDRSDCIQLQDQIARATPTERDTIFNALYPHMGELVCDGAANFVIQKLCENITEEQ 150
Query: 216 RTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTN 275
++R+L +D Q I + +G R + K +E T+P+ I + AL P V L N
Sbjct: 151 QSRMLSFFL-EDVQF--IVDHPNGCRVLQKFIEQ-TSPKNIDPIFLALLPRFVELCSSQN 206
Query: 276 GHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEI 335
G+++ Q + + +++++ + Y + D GC V+Q + LV E+
Sbjct: 207 GNHIAQRFIIKIPNR-VPEIIDKIKGHVYELVVDNWGCRVIQQLFDRQPIQDLIPLVDEV 265
Query: 336 IANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLES 395
+ A LA + +GNYVVQ++L P+ +L+R GH+ FS +K+ SNV+E+C+ ++
Sbjct: 266 LCRAETLATNQFGNYVVQNILNSGTPEHIQALIRAFTGHFYEFSMHKFASNVIEKCIRKA 325
Query: 396 GEEQSTRIIIELL------RSPNVSMLLMHPFGNYVIQSAL 430
++Q I E++ P + ++ FGNYVIQ +
Sbjct: 326 NQQQQNMIFTEIIGPEENYNKPRIKEMVSDQFGNYVIQRII 366
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 72/160 (45%), Gaps = 14/160 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ ++G++ L D +GCR +Q+ P +++ + EV+ R L + FGNYVVQ +
Sbjct: 226 IDKIKGHVYELVVDNWGCRVIQQLFDRQPIQDLIPLVDEVLCRAETLATNQFGNYVVQNI 285
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL---- 263
+ + E ++ T ++ ++ I ++ N QQ +++ +
Sbjct: 286 LNSGTPEHIQALIRAFTGHFYEFSMHKFASNVIEKCIR----KANQQQQNMIFTEIIGPE 341
Query: 264 ----RPGAVTLTKDTNGHYVIQYCVKHF--SHEDTKYLLN 297
+P + D G+YVIQ ++ S D Y+++
Sbjct: 342 ENYNKPRIKEMVSDQFGNYVIQRIIEFGTKSQRDIIYVVS 381
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVID--------RVCELMIDPF 199
+R G+ + ++ +++ + +++ MIF E+I R+ E++ D F
Sbjct: 298 IRAFTGHFYEFSMHKFASNVIEKCIRKANQQQQNMIFTEIIGPEENYNKPRIKEMVSDQF 357
Query: 200 GNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKL 246
GNYV+Q+++E ++ QR I ++ + L+++ H I + L
Sbjct: 358 GNYVIQRIIEFGTKSQRDIIYVVSFENYNYLIKVSYAKHVISCLTNL 404
>gi|50286443|ref|XP_445650.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524955|emb|CAG58561.1| unnamed protein product [Candida glabrata]
Length = 911
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 161/311 (51%), Gaps = 30/311 (9%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
+L+ + G+ + KDQ+G R +Q+ +++ P E E++F E+ D L D FGNYV+QK
Sbjct: 564 TLKSIYGHALEFCKDQHGSRFIQKELATAPPPERELVFNEIRDHALSLANDVFGNYVIQK 623
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E S+ Q+ ++ ++ + L + R + + LE + Q+I LV L
Sbjct: 624 FFEYGSKTQKDILVEQFRG---KMEELSLQMYACRVIQRALEFIDAQQRIDLV-RELSHC 679
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ + KD NG++VIQ ++ + ++LN + + Y ++T GC V+Q +E+
Sbjct: 680 VLQMIKDQNGNHVIQKAIECIPIDLLPFILNSLEGHIYHLSTHSYGCRVVQRLLEFGTLE 739
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLA-----------LRVPQITASLLRQLEGHY 375
++R++ E+ L +D YGNYV+QH+L +RV I ++ + +
Sbjct: 740 DQKRILEELKDFIPYLIQDQYGNYVIQHILQHGSDVNLASEHMRV--IKQEIINNVADNI 797
Query: 376 VSFSCNKYGSNVVERCLLESGEEQSTRIIIELL------------RSPNVSMLLMHPFGN 423
V FS +K+ SNVVE+ ++ ++Q +++ +L SP + +++ F N
Sbjct: 798 VEFSKHKFASNVVEKAIIYGTDDQKIQLMKMILPRDKEHAANLEEDSPLI-LMMRDQFAN 856
Query: 424 YVIQSALLVSK 434
YV+Q ++VS+
Sbjct: 857 YVVQKLVVVSQ 867
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 100/214 (46%), Gaps = 10/214 (4%)
Query: 224 TNDDFQLVRI-------CLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNG 276
TN D L I C + HG R + K L P++ LV +R A++L D G
Sbjct: 559 TNTDLTLKSIYGHALEFCKDQHGSRFIQKELATAPPPER-ELVFNEIRDHALSLANDVFG 617
Query: 277 HYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEII 336
+YVIQ ++ S L+ + ++ C V+Q +E+ QR LV E+
Sbjct: 618 NYVIQKFFEYGSKTQKDILVEQFRGKMEELSLQMYACRVIQRALEFIDAQQRIDLVRELS 677
Query: 337 ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESG 396
L + +D GN+V+Q + + +L LEGH S + YG VV+R LLE G
Sbjct: 678 HCVLQMIKDQNGNHVIQKAIECIPIDLLPFILNSLEGHIYHLSTHSYGCRVVQR-LLEFG 736
Query: 397 EEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ + I+E L+ + L+ +GNYVIQ L
Sbjct: 737 TLEDQKRILEELKD-FIPYLIQDQYGNYVIQHIL 769
>gi|341899697|gb|EGT55632.1| CBN-PUF-8 protein [Caenorhabditis brenneri]
Length = 531
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 144/292 (49%), Gaps = 12/292 (4%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
L D++GN++ AKDQ G R +Q+ + K+E + IF EV+ EL+ D FGNYVVQK
Sbjct: 192 KLSDIKGNLLKFAKDQVGSRFIQQKLEYCDKKEKDSIFDEVVANAAELVDDIFGNYVVQK 251
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E E+ +++ + ++ + R + K LE + P QI +L +R
Sbjct: 252 FFEYGEEKHWAKLVDAVVE---RVPEYAFQMYACRVLQKALEKVNEPLQIK-ILNKVRHV 307
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADN---CYGIATDKSGCCVLQHCVEYS 323
KD NG++V+Q ++ E +++++ + N + ++ D GC V+Q C+E+
Sbjct: 308 IYRCMKDQNGNHVVQKAIEKVGPEYIQFIVDTLLKNHKTVFDMSVDPYGCRVVQRCLEHC 367
Query: 324 KGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
Q ++ I+ + + YGNYVVQH++ + +++++ F+ +KY
Sbjct: 368 IPKQTRPIIERILERFDEVTNNQYGNYVVQHVIQHGTDEDRMFIIKRVAEKLFEFATHKY 427
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRSPNVSM-----LLMHPFGNYVIQSAL 430
SNV+E+CL E I+ P +M ++ + NYV+Q
Sbjct: 428 SSNVIEKCLEEGTVYHKNMIVRSACNQPEGNMPVVVQMMKDQYANYVVQKMF 479
>gi|444319188|ref|XP_004180251.1| hypothetical protein TBLA_0D02280 [Tetrapisispora blattae CBS 6284]
gi|387513293|emb|CCH60732.1| hypothetical protein TBLA_0D02280 [Tetrapisispora blattae CBS 6284]
Length = 951
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 145/252 (57%), Gaps = 18/252 (7%)
Query: 156 VALAKDQYGCRHLQRTMSSLPKEEI----EMIFVEVIDRVCELMIDPFGNYVVQKLVELC 211
+ L+ DQ+GCR LQ+ + + K+E +++F+++ +L++DPFGNY++QKL +
Sbjct: 516 IKLSMDQFGCRFLQKKLENSNKQESLKVRDLMFLQIQPVFLDLILDPFGNYLIQKLCDYL 575
Query: 212 SEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQ-QISLVLAALR------ 264
+ +Q+T ++ + + +Q I +N +G R++ K+++++ N + QI +++
Sbjct: 576 TIDQKTILIQSIYKNVYQ---ISINQYGTRSLQKIIDSIENNETQIDILMQGFSIENTSI 632
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV--ADNCYGIATDKSGCCVLQHCVEY 322
++L D NG++VIQ C+ F + +LLN + +N I+T K GCCVLQ +
Sbjct: 633 DQIISLMNDLNGNHVIQKCIFKFPNSKFDFLLNSIIYENNIVKISTHKHGCCVLQKLLGV 692
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQI--TASLLRQLEGHYVSFSC 380
Q + + ++I L D +GNY++Q++L ++ +I + + L+G++ SC
Sbjct: 693 CNDNQTQLISDKVIEYLNGLINDQFGNYIIQYILNIKTIEIPFMLKIYQILDGNFCKLSC 752
Query: 381 NKYGSNVVERCL 392
K+ SNV+E+ +
Sbjct: 753 LKFSSNVIEKYM 764
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 97/224 (43%), Gaps = 23/224 (10%)
Query: 231 VRICLNTHGIRAVLKLLENLTNPQQIS---LVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
+++ ++ G R + K LEN + + L+ ++P + L D G+Y+IQ +
Sbjct: 516 IKLSMDQFGCRFLQKKLENSNKQESLKVRDLMFLQIQPVFLDLILDPFGNYLIQKLCDYL 575
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE--------RLVAEIIANA 339
+ + L+ + N Y I+ ++ G LQ ++ + + + + I
Sbjct: 576 TIDQKTILIQSIYKNVYQISINQYGTRSLQKIIDSIENNETQIDILMQGFSIENTSIDQI 635
Query: 340 LLLAEDCYGNYVVQHLLALRVPQITASLLRQ---LEGHYVSFSCNKYGSNVVERCLLESG 396
+ L D GN+V+Q + + P L E + V S +K+G V+++ L
Sbjct: 636 ISLMNDLNGNHVIQKCI-FKFPNSKFDFLLNSIIYENNIVKISTHKHGCCVLQKLLGVCN 694
Query: 397 EEQSTRI---IIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
+ Q+ I +IE L L+ FGNY+IQ L + + +
Sbjct: 695 DNQTQLISDKVIEYLNG-----LINDQFGNYIIQYILNIKTIEI 733
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 125/293 (42%), Gaps = 44/293 (15%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEM--------IFVEVIDRVCELMIDPF 199
++ + N+ ++ +QYG R LQ+ + S+ E ++ I ID++ LM D
Sbjct: 584 IQSIYKNVYQISINQYGTRSLQKIIDSIENNETQIDILMQGFSIENTSIDQIISLMNDLN 643
Query: 200 GNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLV 259
GN+V+QK + + +L + ++ +V+I + HG + KLL + N Q L+
Sbjct: 644 GNHVIQKCIFKFPNSKFDFLLNSIIYEN-NIVKISTHKHGCCVLQKLL-GVCNDNQTQLI 701
Query: 260 LAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHC 319
+ L D G+Y+IQY + + + ++L Y I D + C + C
Sbjct: 702 SDKVIEYLNGLINDQFGNYIIQYIL-NIKTIEIPFML-----KIYQIL-DGNFCKL--SC 752
Query: 320 VEYSKGAQRE--RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVS 377
+++S + R + I+ N + NY G
Sbjct: 753 LKFSSNVIEKYMRKLFTIVKNNTFDNTNNNNNY---------------------SGSNHK 791
Query: 378 FSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
N+Y +N+V++ ++ + RI+ E R NV L+ FGNY +Q+ L
Sbjct: 792 HHNNQYKNNIVKQEDVKIIQNIILRIVDEFTRDLNV--LIKDKFGNYTLQTLL 842
>gi|258570377|ref|XP_002543992.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904262|gb|EEP78663.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 877
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 149/292 (51%), Gaps = 10/292 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ +IV + DQ+G R +Q+ + + +E E +F E+ +LM+D FGNYV+QKL
Sbjct: 496 LKDIYNHIVEFSGDQHGSRFIQQKLETANSDEKERVFQEIKPNAIQLMMDVFGNYVIQKL 555
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + ++ + +G R V K LE++ QQ ++V L
Sbjct: 556 FEHGNQAQKKALAQQMMG---HILNLSTQMYGCRVVQKALEHVLLDQQAAIV-KELEHHV 611
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ ++ ++++N+ A GC V+Q +E+
Sbjct: 612 IKCVKDQNGNHVIQKAIERVPQAHIQFIINDFKGQIQRWAVHSYGCRVIQRMLEHCDEED 671
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
RE ++AE+ + L D +GNYV+QH++ + A ++ + V++S +K+ SNV
Sbjct: 672 REAILAELHVCSGNLISDQFGNYVIQHVIENGKEKDRAQMIAVVISDLVTYSKHKFASNV 731
Query: 388 VERCLLESGEEQSTRIIIELL-----RSPNVSMLLMHPFGNYVIQSALLVSK 434
VE+ +E G I+ + R + L+ FGNYV+Q L V K
Sbjct: 732 VEKT-IEFGRNSDRLDILRIFTTLDERGDPLLDLMRDQFGNYVVQKVLQVLK 782
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 2/143 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S + +Y L ++ ++ + D+ G +Q +E + ++ER+ EI NA+ L D +
Sbjct: 488 SKGNKRYELKDIYNHIVEFSGDQHGSRFIQQKLETANSDEKERVFQEIKPNAIQLMMDVF 547
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYV+Q L +L +Q+ GH ++ S YG VV++ L +Q I+ EL
Sbjct: 548 GNYVIQKLFEHGNQAQKKALAQQMMGHILNLSTQMYGCRVVQKALEHVLLDQQAAIVKEL 607
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 608 EH--HVIKCVKDQNGNHVIQKAI 628
>gi|225560981|gb|EEH09262.1| pumilio domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 917
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 146/289 (50%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ +IV + DQ+G R +Q + S +E + +F E+ +LM D FGNYVVQKL
Sbjct: 491 LKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKL 550
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + ++ + +G R V K LE++ QQ S+V L
Sbjct: 551 FEHGNQSQKKILANQMKG---HILALSTQMYGCRVVQKALEHILTDQQASMV-KELENHV 606
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ V+ ++++N + +A GC V+Q +E+
Sbjct: 607 LKCVKDQNGNHVIQKAVERVPSVHIQFIINAFKGQVHRLAAHPYGCRVIQRMLEHCTEPD 666
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R ++ E+ A L D +GNYV+QH++ A ++ + + FS +K+ SNV
Sbjct: 667 RRAILEELHACTSSLIPDQFGNYVIQHVIGNGEEHDKARIISIVISQLLVFSKHKFASNV 726
Query: 388 VERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSAL 430
VE+ + ++Q I+ +L +PN + L+ +GNYVIQ L
Sbjct: 727 VEKSIEFGADDQRAEILRQLT-TPNDRGESPLLGLMRDQYGNYVIQKVL 774
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S + +Y L ++ ++ + D+ G +QH +E + +++++ EI N L L D +
Sbjct: 483 SKNNKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNCLQLMTDVF 542
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYVVQ L L Q++GH ++ S YG VV++ L +Q ++ EL
Sbjct: 543 GNYVVQKLFEHGNQSQKKILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKEL 602
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 603 EN--HVLKCVKDQNGNHVIQKAV 623
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 106/260 (40%), Gaps = 49/260 (18%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
S +++L +++ KDQ G +Q+ + +P I+ I +V L P+G V+
Sbjct: 596 ASMVKELENHVLKCVKDQNGNHVIQKAVERVPSVHIQFIINAFKGQVHRLAAHPYGCRVI 655
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
Q+++E C+E R RA+L+ L T+
Sbjct: 656 QRMLEHCTEPDR------------------------RAILEELHACTS------------ 679
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+L D G+YVIQ+ + + D +++ V + K V++ +E+
Sbjct: 680 ----SLIPDQFGNYVIQHVIGNGEEHDKARIISIVISQLLVFSKHKFASNVVEKSIEFGA 735
Query: 325 GAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVS 377
QR ++ ++ + L L D YGNYV+Q +L +L++++E
Sbjct: 736 DDQRAEILRQLTTPNDRGESPLLGLMRDQYGNYVIQKVLGQLNGLEREALVKKIEPQLTQ 795
Query: 378 FSCNKYGSNV--VERCLLES 395
YG + +E+ + +S
Sbjct: 796 LKKFSYGKQIAAIEKLIYDS 815
>gi|308502562|ref|XP_003113465.1| CRE-PUF-8 protein [Caenorhabditis remanei]
gi|308263424|gb|EFP07377.1| CRE-PUF-8 protein [Caenorhabditis remanei]
Length = 536
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 146/289 (50%), Gaps = 14/289 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+RG ++ AKDQ G R +Q+ + +E + IF EV+ EL+ D FGNYVVQK
Sbjct: 194 LSDIRGQVIKFAKDQVGSRFIQQKLEFCDSKEKDAIFDEVVAHAPELVDDIFGNYVVQKF 253
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E E+ R++ + + ++ + R + K LE ++ P QI +LA +R
Sbjct: 254 FEYGEEKHWARLVDAVVD---RIPEYAFQMYACRVLQKALEKVSEPLQIK-ILARVRHVI 309
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLN---EVADNCYGIATDKSGCCVLQHCVEYSK 324
KD NG++VIQ ++ S +++++ E D Y ++ D GC V+Q C+E+
Sbjct: 310 HRCMKDQNGNHVIQKAIEKVSPPYVQFIVSTLLENPDTIYDMSVDPYGCRVVQRCLEHCI 369
Query: 325 GAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
Q ++ I +A + YGNYVVQH++ ++ ++ + FS +KY
Sbjct: 370 PQQTRPVIERIHERFDDIANNQYGNYVVQHVILHGSDADRMLIVNRVADNLFEFSTHKYS 429
Query: 385 SNVVERCLLESGEEQSTRIIIELLRS------PNVSMLLMHPFGNYVIQ 427
SNV+E+C LE G +++ S P V ++ + NYV+Q
Sbjct: 430 SNVIEKC-LERGAIHHKAMLVGAACSQPEGCMPIVVQMMKDQYANYVVQ 477
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 9/160 (5%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F S+L + I ++ D YGCR +QR + ++ + + +R ++ + +GNY
Sbjct: 336 FIVSTLLENPDTIYDMSVDPYGCRVVQRCLEHCIPQQTRPVIERIHERFDDIANNQYGNY 395
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
VVQ ++ S+ R I+ + ++ F+ + + + K LE + LV AA
Sbjct: 396 VVQHVILHGSDADRMLIVNRVADNLFEF---STHKYSSNVIEKCLERGAIHHKAMLVGAA 452
Query: 263 LR------PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLL 296
P V + KD +YV+Q + + + L+
Sbjct: 453 CSQPEGCMPIVVQMMKDQYANYVVQKMFDQVTSDQRRELI 492
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 89/221 (40%), Gaps = 44/221 (19%)
Query: 251 TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDK 310
+NP + L L+ +R + KD G IQ ++ ++ + +EV + + D
Sbjct: 186 SNPMK-GLKLSDIRGQVIKFAKDQVGSRFIQQKLEFCDSKEKDAIFDEVVAHAPELVDDI 244
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEII----------------ANAL----------LLA- 343
G V+Q EY + RLV ++ AL +LA
Sbjct: 245 FGNYVVQKFFEYGEEKHWARLVDAVVDRIPEYAFQMYACRVLQKALEKVSEPLQIKILAR 304
Query: 344 ---------EDCYGNYVVQHLLALRVPQ----ITASLLRQLEGHYVSFSCNKYGSNVVER 390
+D GN+V+Q + P I ++LL + Y S + YG VV+R
Sbjct: 305 VRHVIHRCMKDQNGNHVIQKAIEKVSPPYVQFIVSTLLENPDTIY-DMSVDPYGCRVVQR 363
Query: 391 CLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALL 431
C LE Q TR +IE + + + +GNYV+Q +L
Sbjct: 364 C-LEHCIPQQTRPVIERIHE-RFDDIANNQYGNYVVQHVIL 402
>gi|71983283|ref|NP_495523.3| Protein PUF-8 [Caenorhabditis elegans]
gi|351065107|emb|CCD66262.1| Protein PUF-8 [Caenorhabditis elegans]
Length = 535
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 150/292 (51%), Gaps = 13/292 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTM-SSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
L D+RG ++ AKDQ G R +Q+ + SS + E + IF EV+ EL+ D FGNYVVQK
Sbjct: 192 LSDIRGALLKFAKDQVGSRFIQQELASSKDRFEKDSIFDEVVSNADELVDDIFGNYVVQK 251
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E E R++ + + ++ + R + K LE + P QI +L+ +R
Sbjct: 252 FFEYGEERHWARLVDAIID---RVPEYAFQMYACRVLQKALEKINEPLQIK-ILSQIRHV 307
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLN---EVADNCYGIATDKSGCCVLQHCVEYS 323
KD NG++V+Q ++ S + +++++ E ++ Y ++ D GC V+Q C+E+
Sbjct: 308 IHRCMKDQNGNHVVQKAIEKVSPQYVQFIVDTLLESSNTIYEMSVDPYGCRVVQRCLEHC 367
Query: 324 KGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+Q + ++ +I +A + YGNYVVQH++ + ++ ++ + F+ +KY
Sbjct: 368 SPSQTKPVIGQIHKRFDEIANNQYGNYVVQHVIEHGSEEDRMVIVTRVSNNLFEFATHKY 427
Query: 384 GSNVVERCLLESGEEQSTRIIIELLRS-----PNVSMLLMHPFGNYVIQSAL 430
SNV+E+CL + + I+ P V ++ + NYV+Q
Sbjct: 428 SSNVIEKCLEQGAVYHKSMIVGAACHHQEGSVPIVVQMMKDQYANYVVQKMF 479
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
Q++Q F +L + I ++ D YGCR +QR + + + + ++ R E+
Sbjct: 331 QYVQ--FIVDTLLESSNTIYEMSVDPYGCRVVQRCLEHCSPSQTKPVIGQIHKRFDEIAN 388
Query: 197 DPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQI 256
+ +GNYVVQ ++E SEE R I+ ++N+ F+ + + + K LE +
Sbjct: 389 NQYGNYVVQHVIEHGSEEDRMVIVTRVSNNLFEF---ATHKYSSNVIEKCLEQGAVYHKS 445
Query: 257 SLVLAALR------PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLL 296
+V AA P V + KD +YV+Q + E + L+
Sbjct: 446 MIVGAACHHQEGSVPIVVQMMKDQYANYVVQKMFDQVTSEQRRELI 491
>gi|145497190|ref|XP_001434584.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401711|emb|CAK67187.1| unnamed protein product [Paramecium tetraurelia]
Length = 581
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 157/296 (53%), Gaps = 8/296 (2%)
Query: 137 QWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMI 196
+W +D +L +RGN+V K Q+G R +Q+ ++ + E++ + E+ + +LMI
Sbjct: 253 EWTED---LQNLEQIRGNVVNFVKTQHGSRLIQKHFTTCTQMELDQMLQEIGSHLPDLMI 309
Query: 197 DPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQI 256
DP+ NY+ L + C+ QR IL + N +LV I + G A+ L+ ++ Q+
Sbjct: 310 DPYANYMFGSLSQSCAPHQRLYILQTIGN---RLVDIACDKKGTHAIQSLVSLISCKQEE 366
Query: 257 SLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVL 316
+V +++ ++LT D+ G ++I+ + FS + + N++ D + + G CVL
Sbjct: 367 QMVENSIKNNIISLTLDSQGTHLIKKIIARFSEDRLNNIFNKLMDRFIQVVNHQFGLCVL 426
Query: 317 QHCV-EYSKGAQRERLVAEIIANAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGH 374
+ + ++ + ++ I + L + +D +GNY VQH++ + AS++ ++
Sbjct: 427 KDLITKFKNNLDKSTVIINKIRDHLDEIIQDPFGNYGVQHVIDVYGDLKCASIIDKILLK 486
Query: 375 YVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+ S +KY SNVVE+C+LE+ + R I +L + L+ + FG +V+Q AL
Sbjct: 487 LIQLSIHKYSSNVVEKCILETSPKTQKRFIKQLSQDIICLELMKNKFGTFVLQKAL 542
>gi|240280462|gb|EER43966.1| mRNA binding protein Pumilio 2 [Ajellomyces capsulatus H143]
Length = 900
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 146/289 (50%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ +IV + DQ+G R +Q + S +E + +F E+ +LM D FGNYVVQKL
Sbjct: 538 LKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKL 597
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + ++ + +G R V K LE++ QQ S+V L
Sbjct: 598 FEHGNQSQKKILANQMKG---HILALSTQMYGCRVVQKALEHILTDQQASMV-KELENHV 653
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ V+ ++++N + +A GC V+Q +E+
Sbjct: 654 LKCVKDQNGNHVIQKAVERVPSVHIQFIINAFKGQVHRLAAHPYGCRVIQRMLEHCTEPD 713
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R ++ E+ A L D +GNYV+QH++ A ++ + + FS +K+ SNV
Sbjct: 714 RRAVLEELHACTSSLIPDQFGNYVIQHVIGNGEEHDKARIISIVISQLLVFSKHKFASNV 773
Query: 388 VERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSAL 430
VE+ + ++Q I+ +L +PN + L+ +GNYVIQ L
Sbjct: 774 VEKSIEFGADDQRAEILRQLT-TPNDRGESPLLGLMRDQYGNYVIQKVL 821
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ +Y L ++ ++ + D+ G +QH +E + +++++ EI N L L D +GNY
Sbjct: 533 NKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNCLQLMTDVFGNY 592
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
VVQ L L Q++GH ++ S YG VV++ L +Q ++ EL
Sbjct: 593 VVQKLFEHGNQSQKKILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKELEN- 651
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 652 -HVLKCVKDQNGNHVIQKAV 670
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 47/220 (21%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
S +++L +++ KDQ G +Q+ + +P I+ I +V L P+G V+
Sbjct: 643 ASMVKELENHVLKCVKDQNGNHVIQKAVERVPSVHIQFIINAFKGQVHRLAAHPYGCRVI 702
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
Q+++E C+E R RAVL+ L T+
Sbjct: 703 QRMLEHCTEPDR------------------------RAVLEELHACTS------------ 726
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+L D G+YVIQ+ + + D +++ V + K V++ +E+
Sbjct: 727 ----SLIPDQFGNYVIQHVIGNGEEHDKARIISIVISQLLVFSKHKFASNVVEKSIEFGA 782
Query: 325 GAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLA 357
QR ++ ++ + L L D YGNYV+Q +L
Sbjct: 783 DDQRAEILRQLTTPNDRGESPLLGLMRDQYGNYVIQKVLG 822
>gi|367015240|ref|XP_003682119.1| hypothetical protein TDEL_0F00970 [Torulaspora delbrueckii]
gi|359749781|emb|CCE92908.1| hypothetical protein TDEL_0F00970 [Torulaspora delbrueckii]
Length = 762
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 158/313 (50%), Gaps = 39/313 (12%)
Query: 156 VALAKDQYGCRHLQRTMSSLPKEEI--EMIFVEVIDRVCELMIDPFGNYVVQKLVELCSE 213
V LA DQ+GCR LQ+ + S + I ++++ ++ +L++D FGNY++QKL E +
Sbjct: 137 VKLATDQFGCRFLQKKLESPTESNIVRDLMYDQIKPFFLDLILDSFGNYLIQKLCEYLTV 196
Query: 214 EQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR------PGA 267
EQ+T ++ + + FQ I +N +G R++ K+++ + N QI L++
Sbjct: 197 EQKTVLIQSIYPNLFQ---ISINQYGTRSLQKIIDTMDNENQIDLIIKGFSQEHTSIDQV 253
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVAD--NCYGIATDKSGCCVLQHCVEYSKG 325
VTL D NG++VIQ C+ F ++++ + D N I+T K GCCVLQ +
Sbjct: 254 VTLINDLNGNHVIQKCIFKFPPSKFSFIIDAIVDQNNIITISTHKHGCCVLQKLLSVCTL 313
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ--ITASLLRQLEGHYVSFSCNKY 383
Q ++ +II L D +GNY++Q LL ++ + + +L SC K+
Sbjct: 314 QQIFKISVKIIQFLPGLINDQFGNYIIQFLLDIKELDFYLLGEIFNRLSNELCQLSCLKF 373
Query: 384 GSNVVE-------RCLLESGEEQS---------------TRIIIELLR--SPNVSMLLMH 419
SNVVE R ++ + + RI++ ++ + N+++L+
Sbjct: 374 SSNVVEKYIKKLFRVIMAAVPKNKHDVASDINDDVVSAVMRILLTIIDIFTLNLNVLIRD 433
Query: 420 PFGNYVIQSALLV 432
FGNY +Q+ L V
Sbjct: 434 NFGNYALQTLLDV 446
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 106/223 (47%), Gaps = 12/223 (5%)
Query: 226 DDFQLVRICLNTHGIRAVLKLLENLTNPQQI-SLVLAALRPGAVTLTKDTNGHYVIQYCV 284
++ V++ + G R + K LE+ T + L+ ++P + L D+ G+Y+IQ
Sbjct: 132 EELDYVKLATDQFGCRFLQKKLESPTESNIVRDLMYDQIKPFFLDLILDSFGNYLIQKLC 191
Query: 285 KHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAE-------IIA 337
++ + E L+ + N + I+ ++ G LQ ++ + L+ + I
Sbjct: 192 EYLTVEQKTVLIQSIYPNLFQISINQYGTRSLQKIIDTMDNENQIDLIIKGFSQEHTSID 251
Query: 338 NALLLAEDCYGNYVVQHLLALRVPQITASLLRQL--EGHYVSFSCNKYGSNVVERCLLES 395
+ L D GN+V+Q + P + ++ + + + ++ S +K+G V+++ L
Sbjct: 252 QVVTLINDLNGNHVIQKCIFKFPPSKFSFIIDAIVDQNNIITISTHKHGCCVLQKLLSVC 311
Query: 396 GEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLF 438
+Q +I +++++ + L+ FGNY+IQ L + ++ +
Sbjct: 312 TLQQIFKISVKIIQF--LPGLINDQFGNYIIQFLLDIKELDFY 352
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 142 SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGN 201
SF ++ D + NI+ ++ ++GC LQ+ +S ++I I V++I + L+ D FGN
Sbjct: 279 SFIIDAIVD-QNNIITISTHKHGCCVLQKLLSVCTLQQIFKISVKIIQFLPGLINDQFGN 337
Query: 202 YVVQKLVEL 210
Y++Q L+++
Sbjct: 338 YIIQFLLDI 346
>gi|147798084|emb|CAN67257.1| hypothetical protein VITISV_039435 [Vitis vinifera]
Length = 507
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 135/280 (48%), Gaps = 3/280 (1%)
Query: 155 IVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEE 214
I+ +A + G L+ ++ E IF +I + L + P G V +L E C
Sbjct: 191 IIEMALNFSGSFLLRSALAEKKPESKSTIFEGLIAHIVTLAVHPSGCNVFIRLTEACDAN 250
Query: 215 QRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDT 274
Q ++IL L ++R+ + G +++ +L++ L + V+ AL G L KD
Sbjct: 251 QLSQILSKLILPPSTIIRVSHDPIGSKSIQRLIQVLRRSPLVVPVVTALAAGFYELMKDQ 310
Query: 275 NGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAE 334
G VI C+ S E + L C +AT GC L + G R+ L+ +
Sbjct: 311 QGAMVISRCLALLSSEQNEELYRAAILPCVALATHAKGCIALNSFINNVIGPYRDLLLHK 370
Query: 335 IIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLE 394
I N + L++D GN+VVQH+L L P T+ + L+G+YV S K GS++VE+CL
Sbjct: 371 ITDNTVFLSQDPRGNFVVQHILELHHPVFTSKICHLLQGYYVRLSVQKSGSHIVEKCL-- 428
Query: 395 SGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
+ + EL S + L FGNYVIQ+AL V+K
Sbjct: 429 -KSHWMSFAVKELTTSGRLPQLAHDQFGNYVIQTALRVTK 467
>gi|312075892|ref|XP_003140618.1| hypothetical protein LOAG_05033 [Loa loa]
Length = 607
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 162/325 (49%), Gaps = 23/325 (7%)
Query: 124 RNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMI 183
R+ + RN LQ L DL ++V A+DQ+G R +Q+ + +E + +
Sbjct: 240 RSHLLDDFRNNRNPHLQ-------LTDLGKHVVEFAQDQHGSRFIQQKLERASLKEKQAV 292
Query: 184 FVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTND-DFQLVRICLNTHGIRA 242
F EV LM D FGNYV+QK E + EQ+ +LTN ++ + L +G R
Sbjct: 293 FDEVALHAQSLMTDVFGNYVIQKFFEYGTTEQKN----ILTNAVKGNVMSLALQMYGCRV 348
Query: 243 VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV--- 299
+ K LE++ QQ+ +L + + KD NG++V+Q ++ +++++ +
Sbjct: 349 IQKALESIEPKQQME-ILKEMEGQVLKCVKDQNGNHVVQKVIERVDASRLQFIIDALVPA 407
Query: 300 ADNCY--GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLA 357
DN ++T GC V+Q +E+ Q+ ++ ++ + L D YGNYV+QH++
Sbjct: 408 GDNMTVCNLSTHPYGCRVIQRVLEHCTDEQKRPVLDQLHKHVKSLIVDQYGNYVIQHVIE 467
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN----- 412
+ ++ Q++G + F+ +K+ SNV+E+CL +I E+ +PN
Sbjct: 468 HGSLEDRDRIVNQVKGDVLHFAQHKFASNVIEKCLTCGEPHHKNALITEVCGNPNDIATP 527
Query: 413 VSMLLMHPFGNYVIQSALLVSKVRL 437
+ M++ F NYV+Q L V+ L
Sbjct: 528 LLMMMKDQFANYVVQKMLDVADSAL 552
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 132/250 (52%), Gaps = 12/250 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSL-PKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
++GN+++LA YGCR +Q+ + S+ PK+++E I E+ +V + + D GN+VVQK++E
Sbjct: 332 VKGNVMSLALQMYGCRVIQKALESIEPKQQME-ILKEMEGQVLKCVKDQNGNHVVQKVIE 390
Query: 210 LCSEEQRTRIL--LMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+ I+ L+ D+ + + + +G R + ++LE+ T+ +Q VL L
Sbjct: 391 RVDASRLQFIIDALVPAGDNMTVCNLSTHPYGCRVIQRVLEHCTD-EQKRPVLDQLHKHV 449
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+L D G+YVIQ+ ++H S ED ++N+V + A K V++ C+ +
Sbjct: 450 KSLIVDQYGNYVIQHVIEHGSLEDRDRIVNQVKGDVLHFAQHKFASNVIEKCLTCGEPHH 509
Query: 328 RERLVAEIIANA-------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSC 380
+ L+ E+ N L++ +D + NYVVQ +L + + ++ ++ H +
Sbjct: 510 KNALITEVCGNPNDIATPLLMMMKDQFANYVVQKMLDVADSALRKKMMLAIKPHIPALRK 569
Query: 381 NKYGSNVVER 390
YG +++ +
Sbjct: 570 YNYGKHIITK 579
>gi|357608364|gb|EHJ65955.1| putative pumilio [Danaus plexippus]
Length = 712
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 142/269 (52%), Gaps = 6/269 (2%)
Query: 168 LQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDD 227
+Q+ + +E +M+F E+I LM D FGNYV+QK E + EQ+T + +
Sbjct: 395 IQQKLERATVQEKQMVFNEIIGAAYSLMTDVFGNYVIQKFFEFGTTEQKTTLAQKVRG-- 452
Query: 228 FQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
++ + L +G R + K LE++ P+Q V+ L + KD NG++V+Q C++
Sbjct: 453 -HVLALALQMYGCRVIQKALESIP-PEQQQEVVRELDGHVLKCVKDQNGNHVVQKCIECV 510
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
++++N A Y ++T GC V+Q +E+ Q ++AE+ A+ L +D Y
Sbjct: 511 EPAALQFIINAFAGQVYALSTHPYGCRVIQRILEHCTAEQTAPVLAELHAHTDQLIQDQY 570
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYVVQH+L + + L+ + G + S +K+ SNVVE+C+ + + +I EL
Sbjct: 571 GNYVVQHVLEHGAAEDRSRLVAGVRGKVLQLSQHKFASNVVEKCVTHATRNERALLIDEL 630
Query: 408 --LRSPNVSMLLMHPFGNYVIQSALLVSK 434
+ +++ + NYV+Q + V++
Sbjct: 631 CGFNDNALHVMMKDQYANYVVQKMIDVAE 659
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 131/248 (52%), Gaps = 12/248 (4%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ +RG+++ALA YGCR +Q+ + S+P E+ + + E+ V + + D GN+VVQK +
Sbjct: 448 QKVRGHVLALALQMYGCRVIQKALESIPPEQQQEVVRELDGHVLKCVKDQNGNHVVQKCI 507
Query: 209 ELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPG 266
E C E + ++ + F L+TH G R + ++LE+ T +Q + VLA L
Sbjct: 508 E-CVEPAALQFII----NAFAGQVYALSTHPYGCRVIQRILEHCTA-EQTAPVLAELHAH 561
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L +D G+YV+Q+ ++H + ED L+ V ++ K V++ CV ++
Sbjct: 562 TDQLIQDQYGNYVVQHVLEHGAAEDRSRLVAGVRGKVLQLSQHKFASNVVEKCVTHATRN 621
Query: 327 QRERLVAEIIA---NAL-LLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
+R L+ E+ NAL ++ +D Y NYVVQ ++ + P L+ ++ H S
Sbjct: 622 ERALLIDELCGFNDNALHVMMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHIGSLRKYT 681
Query: 383 YGSNVVER 390
YG +++ +
Sbjct: 682 YGKHIIAK 689
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 7/181 (3%)
Query: 255 QISLVLAALRPGAVTLTKDT---NGH--YVIQYCVKHFSHEDTKYLLNEVADNCYGIATD 309
QI L++ L+ + +D NG + IQ ++ + ++ + + NE+ Y + TD
Sbjct: 365 QIRLLVNKLKEAGIEDVQDILEGNGEFRWFIQQKLERATVQEKQMVFNEIIGAAYSLMTD 424
Query: 310 KSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLR 369
G V+Q E+ Q+ L ++ + L LA YG V+Q L P+ ++R
Sbjct: 425 VFGNYVIQKFFEFGTTEQKTTLAQKVRGHVLALALQMYGCRVIQKALESIPPEQQQEVVR 484
Query: 370 QLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSA 429
+L+GH + ++ G++VV++C +E E + + II + V L HP+G VIQ
Sbjct: 485 ELDGHVLKCVKDQNGNHVVQKC-IECVEPAALQFIINAF-AGQVYALSTHPYGCRVIQRI 542
Query: 430 L 430
L
Sbjct: 543 L 543
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 62/140 (44%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L +L + L +DQYG +Q + E+ + V +V +L F + VV+K
Sbjct: 555 LAELHAHTDQLIQDQYGNYVVQHVLEHGAAEDRSRLVAGVRGKVLQLSQHKFASNVVEKC 614
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
V + +R ++ L + + + + V++ + ++ P Q +++ +RP
Sbjct: 615 VTHATRNERALLIDELCGFNDNALHVMMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHI 674
Query: 268 VTLTKDTNGHYVIQYCVKHF 287
+L K T G ++I K F
Sbjct: 675 GSLRKYTYGKHIIAKLEKFF 694
>gi|164425099|ref|XP_957151.2| hypothetical protein NCU06511 [Neurospora crassa OR74A]
gi|157070789|gb|EAA27915.2| predicted protein [Neurospora crassa OR74A]
Length = 821
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 147/298 (49%), Gaps = 27/298 (9%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+ + G+I A D+ G R +Q + S EE ++ E+++ + LM D +GNYVVQK
Sbjct: 385 LKQIYGSIADFAADRAGSRFIQDKLQSASSEEKAEVWRELMEELMPLMTDVYGNYVVQKF 444
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++EQ+T + ++ + ++R+ N +G RA L+N+ Q+ LV L+
Sbjct: 445 FEHGTQEQKTSMAGIIKKN---MLRLSENKYGCRA----LDNIFRRYQVELV-NELKDHV 496
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV--ADNCYGIATDKSGCCVLQHCVEYSKG 325
L K G++VIQ +K ++ ++ + +A ++ C V+Q +E+
Sbjct: 497 DKLNKSQEGNHVIQMIIKLLPRDEIGFIYDSFRGPGKVMELALNQYACRVIQRALEHGNE 556
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
R LV+E+ A L D YGNYV QH++ P+ A ++ + ++ S +K+ S
Sbjct: 557 EDRLYLVSELHKGAHTLITDAYGNYVAQHIIEAGKPEDRARMIAAVMSQTITLSTHKHAS 616
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSM----------------LLMHPFGNYVIQ 427
NVVE+C + G + R I ++ SP M L++ F NYVIQ
Sbjct: 617 NVVEKC-INYGTPEDVRRIRDMFFSPQDGMGGYSSDHQSPDSFLRFLMLDHFANYVIQ 673
>gi|35186936|gb|AAQ84130.1| pumilio protein 1 [Trypanosoma cruzi]
Length = 827
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 139/260 (53%), Gaps = 15/260 (5%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G V A+DQ G R +QR + S +E++ +F E+ + L+ D FGNYV+QKL+E+ +
Sbjct: 413 GYAVEFAQDQEGSRFIQRAVESATHDEVDALFHEIFESPLVLVTDIFGNYVLQKLLEVGN 472
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
Q L N+ +V + L T+G R + K +E + P+ + ++LA L+ +
Sbjct: 473 ARQLAHAATRLQNN---VVSLTLQTYGCRVIQKCIE-VMPPEGLDIILAELKGNVAKCIQ 528
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGC----CVLQHCVEYSKGAQR 328
D NG++V+Q CV+ + + ++++ +AT GC C++QHC + Q
Sbjct: 529 DQNGNHVVQKCVE-VTPQRCGFIVSAFTGRVMELATHAYGCRVIQCIMQHCPD-----QE 582
Query: 329 ERLVAEIIANALLLAEDCYGNYVVQHLLA-LRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
E + +EI+ LA+D YGNYV+QH+L ++ + L+ + FS K+ SNV
Sbjct: 583 EVIFSEILKCVDTLAKDQYGNYVIQHVLQHMKDENKVTRVFNALKDDFYEFSKQKFASNV 642
Query: 388 VERCLLESGEEQSTRIIIEL 407
+E+ + + EQ +I +L
Sbjct: 643 MEKIFVRADPEQRMELIQKL 662
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 136/294 (46%), Gaps = 25/294 (8%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L+ N+V+L YGCR +Q+ + +P E +++I E+ V + + D GN+VVQK VE+
Sbjct: 483 LQNNVVSLTLQTYGCRVIQKCIEVMPPEGLDIILAELKGNVAKCIQDQNGNHVVQKCVEV 542
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ R +++ +++ + + +G R + ++++ P Q ++ + + TL
Sbjct: 543 TPQ----RCGFIVSAFTGRVMELATHAYGCRVIQCIMQHC--PDQEEVIFSEILKCVDTL 596
Query: 271 TKDTNGHYVIQYCVKHFSHED-TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
KD G+YVIQ+ ++H E+ + N + D+ Y + K V++ + QR
Sbjct: 597 AKDQYGNYVIQHVLQHMKDENKVTRVFNALKDDFYEFSKQKFASNVMEKIFVRADPEQRM 656
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVE 389
L+ ++ A L V+ L R+P + + Y K G E
Sbjct: 657 ELIQKLCAPVEGLE-----TAPVEVLAFKRLPPVKKEETEKQRNGYA-----KKGRRDKE 706
Query: 390 RCLLESGEEQSTRIIIEL----LRSPNVSMLLMH-PFGNYVIQSALLVSKVRLF 438
R E +E + +IE+ +P++ L+M PF NYV Q L + V F
Sbjct: 707 R---EREKESAGGPVIEVHSDGKEAPSMLCLMMQNPFANYVAQRVLDAADVDQF 757
>gi|71411474|ref|XP_807985.1| pumilio/PUF RNA binding protein 6 [Trypanosoma cruzi strain CL
Brener]
gi|70872096|gb|EAN86134.1| pumilio/PUF RNA binding protein 6, putative [Trypanosoma cruzi]
Length = 827
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 139/260 (53%), Gaps = 15/260 (5%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G V A+DQ G R +QR + S +E++ +F E+ + L+ D FGNYV+QKL+E+ +
Sbjct: 413 GYAVEFAQDQEGSRFIQRAVESATHDEVDALFHEIFESPLVLVTDIFGNYVLQKLLEVGN 472
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
Q L N+ +V + L T+G R + K +E + P+ + ++LA L+ +
Sbjct: 473 ARQLAHAATRLQNN---VVSLTLQTYGCRVIQKCIE-VMPPEGLDIILAELKGNVAKCIQ 528
Query: 273 DTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGC----CVLQHCVEYSKGAQR 328
D NG++V+Q CV+ + + ++++ +AT GC C++QHC + Q
Sbjct: 529 DQNGNHVVQKCVE-VTPQRCGFIVSAFTGRVMELATHAYGCRVIQCIMQHCPD-----QE 582
Query: 329 ERLVAEIIANALLLAEDCYGNYVVQHLLA-LRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
E + +EI+ LA+D YGNYV+QH+L ++ + L+ + FS K+ SNV
Sbjct: 583 EVIFSEILKCVDTLAKDQYGNYVIQHVLQHMKDENKVTRVFNALKDDFYEFSKQKFASNV 642
Query: 388 VERCLLESGEEQSTRIIIEL 407
+E+ + + EQ +I +L
Sbjct: 643 MEKIFVRADPEQRMELIQKL 662
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 136/294 (46%), Gaps = 25/294 (8%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L+ N+V+L YGCR +Q+ + +P E +++I E+ V + + D GN+VVQK VE+
Sbjct: 483 LQNNVVSLTLQTYGCRVIQKCIEVMPPEGLDIILAELKGNVAKCIQDQNGNHVVQKCVEV 542
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ R +++ +++ + + +G R + ++++ P Q ++ + + TL
Sbjct: 543 TPQ----RCGFIVSAFTGRVMELATHAYGCRVIQCIMQHC--PDQEEVIFSEILKCVDTL 596
Query: 271 TKDTNGHYVIQYCVKHFSHED-TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
KD G+YVIQ+ ++H E+ + N + D+ Y + K V++ + QR
Sbjct: 597 AKDQYGNYVIQHVLQHMKDENKVTRVFNALKDDFYEFSKQKFASNVMEKIFVRADPEQRM 656
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVE 389
L+ ++ A L V+ L R+P + + Y K G E
Sbjct: 657 ELIQKLCAPVEGLE-----TAPVEVLAFKRLPPVKKEETEKQRNGYA-----KKGRRDKE 706
Query: 390 RCLLESGEEQSTRIIIEL----LRSPNVSMLLMH-PFGNYVIQSALLVSKVRLF 438
R E +E + +IE+ +P++ L+M PF NYV Q L + V F
Sbjct: 707 R---EREKESAGGPVIEVHSDGKEAPSMLCLMMQNPFANYVAQRVLDAADVDQF 757
>gi|393907055|gb|EJD74503.1| puf domain-containing protein 9 [Loa loa]
Length = 731
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 162/325 (49%), Gaps = 23/325 (7%)
Query: 124 RNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMI 183
R+ + RN LQ L DL ++V A+DQ+G R +Q+ + +E + +
Sbjct: 364 RSHLLDDFRNNRNPHLQ-------LTDLGKHVVEFAQDQHGSRFIQQKLERASLKEKQAV 416
Query: 184 FVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTND-DFQLVRICLNTHGIRA 242
F EV LM D FGNYV+QK E + EQ+ +LTN ++ + L +G R
Sbjct: 417 FDEVALHAQSLMTDVFGNYVIQKFFEYGTTEQKN----ILTNAVKGNVMSLALQMYGCRV 472
Query: 243 VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV--- 299
+ K LE++ QQ+ +L + + KD NG++V+Q ++ +++++ +
Sbjct: 473 IQKALESIEPKQQME-ILKEMEGQVLKCVKDQNGNHVVQKVIERVDASRLQFIIDALVPA 531
Query: 300 ADNCY--GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLA 357
DN ++T GC V+Q +E+ Q+ ++ ++ + L D YGNYV+QH++
Sbjct: 532 GDNMTVCNLSTHPYGCRVIQRVLEHCTDEQKRPVLDQLHKHVKSLIVDQYGNYVIQHVIE 591
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN----- 412
+ ++ Q++G + F+ +K+ SNV+E+CL +I E+ +PN
Sbjct: 592 HGSLEDRDRIVNQVKGDVLHFAQHKFASNVIEKCLTCGEPHHKNALITEVCGNPNDIATP 651
Query: 413 VSMLLMHPFGNYVIQSALLVSKVRL 437
+ M++ F NYV+Q L V+ L
Sbjct: 652 LLMMMKDQFANYVVQKMLDVADSAL 676
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 132/250 (52%), Gaps = 12/250 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSL-PKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
++GN+++LA YGCR +Q+ + S+ PK+++E I E+ +V + + D GN+VVQK++E
Sbjct: 456 VKGNVMSLALQMYGCRVIQKALESIEPKQQME-ILKEMEGQVLKCVKDQNGNHVVQKVIE 514
Query: 210 LCSEEQRTRIL--LMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+ I+ L+ D+ + + + +G R + ++LE+ T+ +Q VL L
Sbjct: 515 RVDASRLQFIIDALVPAGDNMTVCNLSTHPYGCRVIQRVLEHCTD-EQKRPVLDQLHKHV 573
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+L D G+YVIQ+ ++H S ED ++N+V + A K V++ C+ +
Sbjct: 574 KSLIVDQYGNYVIQHVIEHGSLEDRDRIVNQVKGDVLHFAQHKFASNVIEKCLTCGEPHH 633
Query: 328 RERLVAEIIANA-------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSC 380
+ L+ E+ N L++ +D + NYVVQ +L + + ++ ++ H +
Sbjct: 634 KNALITEVCGNPNDIATPLLMMMKDQFANYVVQKMLDVADSALRKKMMLAIKPHIPALRK 693
Query: 381 NKYGSNVVER 390
YG +++ +
Sbjct: 694 YNYGKHIITK 703
>gi|325096471|gb|EGC49781.1| pumilio [Ajellomyces capsulatus H88]
Length = 876
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 146/289 (50%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ +IV + DQ+G R +Q + S +E + +F E+ +LM D FGNYVVQKL
Sbjct: 450 LKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKL 509
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + ++ + +G R V K LE++ QQ S+V L
Sbjct: 510 FEHGNQSQKKILANQMKG---HILALSTQMYGCRVVQKALEHILTDQQASMV-KELENHV 565
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ V+ ++++N + +A GC V+Q +E+
Sbjct: 566 LKCVKDQNGNHVIQKAVERVPSVHIQFIINAFKGQVHRLAAHPYGCRVIQRMLEHCTEPD 625
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R ++ E+ A L D +GNYV+QH++ A ++ + + FS +K+ SNV
Sbjct: 626 RRAVLEELHACTSSLIPDQFGNYVIQHVIGNGEEHDKARIISIVISQLLVFSKHKFASNV 685
Query: 388 VERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSAL 430
VE+ + ++Q I+ +L +PN + L+ +GNYVIQ L
Sbjct: 686 VEKSIEFGADDQRAEILRQLT-TPNDRGESPLLGLMRDQYGNYVIQKVL 733
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 49/260 (18%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVV 204
S +++L +++ KDQ G +Q+ + +P I+ I +V L P+G V+
Sbjct: 555 ASMVKELENHVLKCVKDQNGNHVIQKAVERVPSVHIQFIINAFKGQVHRLAAHPYGCRVI 614
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
Q+++E C+E R RAVL+ L T+
Sbjct: 615 QRMLEHCTEPDR------------------------RAVLEELHACTS------------ 638
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSK 324
+L D G+YVIQ+ + + D +++ V + K V++ +E+
Sbjct: 639 ----SLIPDQFGNYVIQHVIGNGEEHDKARIISIVISQLLVFSKHKFASNVVEKSIEFGA 694
Query: 325 GAQRERLVAEII-------ANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVS 377
QR ++ ++ + L L D YGNYV+Q +L +L++++E
Sbjct: 695 DDQRAEILRQLTTPNDRGESPLLGLMRDQYGNYVIQKVLGQLNGLEREALVKKIEPQLTQ 754
Query: 378 FSCNKYGSNV--VERCLLES 395
YG + +E+ + +S
Sbjct: 755 LKKFSYGKQIAAIEKLIYDS 774
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ +Y L ++ ++ + D+ G +QH +E + +++++ EI N L L D +GNY
Sbjct: 445 NKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNCLQLMTDVFGNY 504
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
VVQ L L Q++GH ++ S YG VV++ L +Q ++ EL
Sbjct: 505 VVQKLFEHGNQSQKKILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKELEN- 563
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 564 -HVLKCVKDQNGNHVIQKAV 582
>gi|365985826|ref|XP_003669745.1| hypothetical protein NDAI_0D01880 [Naumovozyma dairenensis CBS 421]
gi|343768514|emb|CCD24502.1| hypothetical protein NDAI_0D01880 [Naumovozyma dairenensis CBS 421]
Length = 1047
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 158/310 (50%), Gaps = 26/310 (8%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
+L+D+ G+I+ +DQYG R +Q +S + E E+IF E+ + L D FGNYV+QK
Sbjct: 698 TLKDIFGHILEFCRDQYGSRFIQHELSICSESEKEIIFNELRNEALILSNDVFGNYVIQK 757
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E S QR +++ + ++ + L + R + K LE + Q++SLV + L
Sbjct: 758 FFEFGSITQRD---ILVEQFNGKMKELSLQMYACRVIQKALEFIKPEQRLSLV-SELSDC 813
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++VIQ +++ + ++LN + + Y ++T GC V+Q +E+
Sbjct: 814 ILMTIKDQNGNHVIQKAIEYIPLKSLPFILNSLIGHIYHLSTHSYGCRVIQRLLEFGSDK 873
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALR-----------VPQITASLLRQLEGHY 375
+ ++ E+ L +D YGNYV+Q++L + + +++ + +
Sbjct: 874 DQYIILNELKDFIPYLIQDQYGNYVIQYILQQHEDNEASKICPLMLETKQEIIKIVSKNV 933
Query: 376 VSFSCNKYGSNVVERCLLESGEEQSTRIIIELLR---------SPNVSMLLM--HPFGNY 424
V FS +K+ SNVVE+ ++ E Q II +++ N M+LM F NY
Sbjct: 934 VEFSKHKFASNVVEKSIIYGNESQRKLIISKIVPRDKENAENLEDNSPMILMMRDQFANY 993
Query: 425 VIQSALLVSK 434
V+Q + +S+
Sbjct: 994 VVQKLVTISE 1003
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 3/213 (1%)
Query: 218 RILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGH 277
+I L L + ++ C + +G R + L + + + ++ LR A+ L+ D G+
Sbjct: 694 KINLTLKDIFGHILEFCRDQYGSRFIQHELS-ICSESEKEIIFNELRNEALILSNDVFGN 752
Query: 278 YVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA 337
YVIQ + S L+ + ++ C V+Q +E+ K QR LV+E+
Sbjct: 753 YVIQKFFEFGSITQRDILVEQFNGKMKELSLQMYACRVIQKALEFIKPEQRLSLVSELSD 812
Query: 338 NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGE 397
L+ +D GN+V+Q + + +L L GH S + YG V++R LLE G
Sbjct: 813 CILMTIKDQNGNHVIQKAIEYIPLKSLPFILNSLIGHIYHLSTHSYGCRVIQR-LLEFGS 871
Query: 398 EQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
++ II+ L+ + L+ +GNYVIQ L
Sbjct: 872 DKDQYIILNELKDF-IPYLIQDQYGNYVIQYIL 903
>gi|255945903|ref|XP_002563719.1| Pc20g12340 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588454|emb|CAP86563.1| Pc20g12340 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 906
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 150/289 (51%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ ++V + DQ+G R +Q+ + + +E E +F E+ +LM D FGNYVVQKL
Sbjct: 488 LKDIYNHVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKL 547
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + ++ + +G R V K LE++ QQ ++V L
Sbjct: 548 FEHGNQTQKKILANQMRG---HVLALSTQMYGCRVVQKALEHILTDQQAAMV-KELENHV 603
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ ++ + ++++N +A GC V+Q +E+ +
Sbjct: 604 LKCVRDQNGNHVIQKAIERVPSQYVQFIINAFRGQVNRLAAHPYGCRVIQRMLEHCEEVD 663
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R+ ++AE+ A L D +GNYV+QH++ + ++ + G +++S +K+ SNV
Sbjct: 664 RQSILAELHACTSNLIPDQFGNYVIQHVIENGDEKDRTRMIDIVMGQLLAYSKHKFASNV 723
Query: 388 VERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSAL 430
VE+ +E G E II L S N + L+ +GNYVIQ L
Sbjct: 724 VEKS-IEFGAEHERNHIISTLTSTNDRGESPLLGLMRDQYGNYVIQKVL 771
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 116/245 (47%), Gaps = 11/245 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++AL+ YGCR +Q+ + + ++ + E+ + V + + D GN+V+QK +E
Sbjct: 563 MRGHVLALSTQMYGCRVVQKALEHILTDQQAAMVKELENHVLKCVRDQNGNHVIQKAIER 622
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ + ++ Q+ R+ + +G R + ++LE+ + S +LA L L
Sbjct: 623 VPSQ---YVQFIINAFRGQVNRLAAHPYGCRVIQRMLEHCEEVDRQS-ILAELHACTSNL 678
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
D G+YVIQ+ +++ +D +++ V + K V++ +E+ +R
Sbjct: 679 IPDQFGNYVIQHVIENGDEKDRTRMIDIVMGQLLAYSKHKFASNVVEKSIEFGAEHERNH 738
Query: 331 LVAEIIANA-------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+++ + + L L D YGNYV+Q +L +L+ Q++ Y
Sbjct: 739 IISTLTSTNDRGESPLLGLMRDQYGNYVIQKVLGQLKDAEREALIEQIKPLLSQLKKFSY 798
Query: 384 GSNVV 388
G +V
Sbjct: 799 GKQIV 803
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S + +Y L ++ ++ + D+ G +Q +E + ++E++ EI N L L D +
Sbjct: 480 SKGNKRYELKDIYNHVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVF 539
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYVVQ L L Q+ GH ++ S YG VV++ L +Q ++ EL
Sbjct: 540 GNYVVQKLFEHGNQTQKKILANQMRGHVLALSTQMYGCRVVQKALEHILTDQQAAMVKEL 599
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 600 EN--HVLKCVRDQNGNHVIQKAI 620
>gi|425773915|gb|EKV12240.1| mRNA binding protein Pumilio 2, putative [Penicillium digitatum
PHI26]
gi|425782417|gb|EKV20327.1| mRNA binding protein Pumilio 2, putative [Penicillium digitatum
Pd1]
Length = 904
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 150/289 (51%), Gaps = 11/289 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ ++V + DQ+G R +Q+ + + +E E +F E+ +LM D FGNYVVQKL
Sbjct: 486 LKDIYNHVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKL 545
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + ++ + +G R V K LE++ QQ ++V L
Sbjct: 546 FEHGNQTQKKILANQMRG---HVLALSTQMYGCRVVQKALEHILTDQQAAMV-KELENHV 601
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ +D NG++VIQ ++ + ++++N +A GC V+Q +E+ +
Sbjct: 602 LKCVRDQNGNHVIQKAIERVPSQHVQFIINAFRGQVNRLAAHPYGCRVIQRMLEHCEEVD 661
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
R+ ++AE+ A L D +GNYV+QH++ + ++ + G +++S +K+ SNV
Sbjct: 662 RQSILAELHACTSNLIPDQFGNYVIQHVIENGDEKDRTRMIDIVMGQLLAYSKHKFASNV 721
Query: 388 VERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSAL 430
VE+ +E G E II L S N + L+ +GNYVIQ L
Sbjct: 722 VEKS-IEFGAEHERIHIISTLTSANDRGESPLLGLMRDQYGNYVIQKVL 769
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Query: 288 SHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
S + +Y L ++ ++ + D+ G +Q +E + ++E++ EI N L L D +
Sbjct: 478 SKGNKRYELKDIYNHVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVF 537
Query: 348 GNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
GNYVVQ L L Q+ GH ++ S YG VV++ L +Q ++ EL
Sbjct: 538 GNYVVQKLFEHGNQTQKKILANQMRGHVLALSTQMYGCRVVQKALEHILTDQQAAMVKEL 597
Query: 408 LRSPNVSMLLMHPFGNYVIQSAL 430
+V + GN+VIQ A+
Sbjct: 598 EN--HVLKCVRDQNGNHVIQKAI 618
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 9/155 (5%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
RG + LA YGCR +QR + + + + I E+ L+ D FGNYV+Q ++E
Sbjct: 633 FRGQVNRLAAHPYGCRVIQRMLEHCEEVDRQSILAELHACTSNLIPDQFGNYVIQHVIEN 692
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQI---SLVLAALRPGA 267
E+ RTR++ ++ QL+ + V K +E ++I S + +A G
Sbjct: 693 GDEKDRTRMIDIVMG---QLLAYSKHKFASNVVEKSIEFGAEHERIHIISTLTSANDRGE 749
Query: 268 ---VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV 299
+ L +D G+YVIQ + H + + L++++
Sbjct: 750 SPLLGLMRDQYGNYVIQKVLGQLKHVEREALIDQI 784
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 104/245 (42%), Gaps = 47/245 (19%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+RG+++AL+ YGCR +Q+ + + ++ + E+ + V + + D GN+V+QK +E
Sbjct: 561 MRGHVLALSTQMYGCRVVQKALEHILTDQQAAMVKELENHVLKCVRDQNGNHVIQKAIER 620
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ + ++ Q+ R+ + +G R + ++LE+ + S +LA L L
Sbjct: 621 VPSQH---VQFIINAFRGQVNRLAAHPYGCRVIQRMLEHCEEVDRQS-ILAELHACTSNL 676
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEV------------ADNCY-------------- 304
D G+YVIQ+ +++ +D +++ V A N
Sbjct: 677 IPDQFGNYVIQHVIENGDEKDRTRMIDIVMGQLLAYSKHKFASNVVEKSIEFGAEHERIH 736
Query: 305 -----------------GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCY 347
G+ D+ G V+Q + K +RE L+ +I L + Y
Sbjct: 737 IISTLTSANDRGESPLLGLMRDQYGNYVIQKVLGQLKHVEREALIDQIKPLLGQLKKFSY 796
Query: 348 GNYVV 352
G +V
Sbjct: 797 GKQIV 801
>gi|170596494|ref|XP_001902784.1| RE63138p [Brugia malayi]
gi|158589322|gb|EDP28367.1| RE63138p, putative [Brugia malayi]
Length = 572
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 162/325 (49%), Gaps = 23/325 (7%)
Query: 124 RNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMI 183
R+ + RN LQ L DL ++V A+DQ+G R +Q+ + +E + +
Sbjct: 235 RSHLLDDFRNNRNPHLQ-------LIDLGKHVVEFAQDQHGSRFIQQKLERASLKEKQAV 287
Query: 184 FVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTND-DFQLVRICLNTHGIRA 242
F EV LM D FGNYV+QK E + EQ+ +LTN ++ + L +G R
Sbjct: 288 FDEVALHAQSLMTDVFGNYVIQKFFEYGTNEQKN----ILTNAVKGNVMSLALQMYGCRV 343
Query: 243 VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV--- 299
+ K LE++ P+Q +L + + KD NG++V+Q ++ +++++ +
Sbjct: 344 IQKALESI-EPEQQMEILKEMEGQVLKCVKDQNGNHVVQKVIERVDASRLQFIIDALVPA 402
Query: 300 ADNCY--GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLA 357
DN ++T GC V+Q +E+ Q+ ++ ++ + L D YGNYV+QH++
Sbjct: 403 GDNMTVCNLSTHPYGCRVIQRVLEHCTDDQKRPVLDQLHKHVKSLIVDQYGNYVIQHVIE 462
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN----- 412
+ ++ Q++G + F+ +K+ SNV+E+CL +I E+ +PN
Sbjct: 463 HGSLEDRDRIVNQVKGDVLRFAQHKFASNVIEKCLTCGEPHHKNALITEVCGNPNDIATP 522
Query: 413 VSMLLMHPFGNYVIQSALLVSKVRL 437
+ M++ F NYV+Q L V+ L
Sbjct: 523 LLMMMKDQFANYVVQKMLDVADSAL 547
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 127/247 (51%), Gaps = 10/247 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++GN+++LA YGCR +Q+ + S+ E+ I E+ +V + + D GN+VVQK++E
Sbjct: 327 VKGNVMSLALQMYGCRVIQKALESIEPEQQMEILKEMEGQVLKCVKDQNGNHVVQKVIER 386
Query: 211 CSEEQRTRIL--LMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
+ I+ L+ D+ + + + +G R + ++LE+ T+ Q+ VL L
Sbjct: 387 VDASRLQFIIDALVPAGDNMTVCNLSTHPYGCRVIQRVLEHCTDDQK-RPVLDQLHKHVK 445
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
+L D G+YVIQ+ ++H S ED ++N+V + A K V++ C+ + +
Sbjct: 446 SLIVDQYGNYVIQHVIEHGSLEDRDRIVNQVKGDVLRFAQHKFASNVIEKCLTCGEPHHK 505
Query: 329 ERLVAEIIANA-------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ N L++ +D + NYVVQ +L + + ++ ++ H +
Sbjct: 506 NALITEVCGNPNDIATPLLMMMKDQFANYVVQKMLDVADSALRKKMMLAIKPHIPALRKY 565
Query: 382 KYGSNVV 388
YG +++
Sbjct: 566 NYGKHII 572
>gi|335892195|pdb|2YJY|A Chain A, A Specific And Modular Binding Code For Cytosine
Recognition In Puf Domains
gi|335892196|pdb|2YJY|B Chain B, A Specific And Modular Binding Code For Cytosine
Recognition In Puf Domains
Length = 350
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 157/293 (53%), Gaps = 9/293 (3%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK
Sbjct: 19 QLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQK 78
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E S EQ+ L + ++ + L +G R + K LE + + QQ +V L
Sbjct: 79 FFEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMV-RELDGH 134
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++V+Q C++ + +++++ + ++T GC V+Q +E+
Sbjct: 135 VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD 194
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q ++ E+ + L +D YG+YV++H+L P+ + ++ ++ G+ + S +K+ SN
Sbjct: 195 QTLPILEELHQHTEQLVQDQYGSYVIRHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 254
Query: 387 VVERCLLESGEEQSTRIIIELLR---SPNVSMLLMHP--FGNYVIQSALLVSK 434
VVE+C+ + + +I E+ P+ ++ M + NYV+Q + V++
Sbjct: 255 VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 307
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+
Sbjct: 73 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELD 132
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKL 246
V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++
Sbjct: 133 GHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRI 187
Query: 247 LENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
LE+ P Q +L L L +D G YVI++ ++H ED ++ E+ N +
Sbjct: 188 LEHCL-PDQTLPILEELHQHTEQLVQDQYGSYVIRHVLEHGRPEDKSKIVAEIRGNVLVL 246
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIA------NALL-LAEDCYGNYVVQHLLALR 359
+ K V++ CV ++ +R L+ E+ +AL + +D Y NYVVQ ++ +
Sbjct: 247 SQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVA 306
Query: 360 VPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
P ++ ++ H + YG +++ +
Sbjct: 307 EPGQRKIVMHKIRPHIATLRKYTYGKHILAK 337
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L + + ++D +G IQ ++ + + + + NE+ Y
Sbjct: 5 RLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAY 64
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ D G V+Q E+ Q+ L I + L LA YG V+Q L
Sbjct: 65 QLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQ 124
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++R+L+GH + ++ G++VV++C +E + QS + II+ + V L HP+G
Sbjct: 125 NEMVRELDGHVLKCVKDQNGNHVVQKC-IECVQPQSLQFIIDAFKG-QVFALSTHPYGCR 182
Query: 425 VIQSAL 430
VIQ L
Sbjct: 183 VIQRIL 188
>gi|58263134|ref|XP_568977.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|58263136|ref|XP_568978.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|58263138|ref|XP_568979.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223627|gb|AAW41670.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223628|gb|AAW41671.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223629|gb|AAW41672.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 673
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 150/295 (50%), Gaps = 20/295 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G+IV A DQ+G R +Q+ + + E+ + +F E+ +LM D FGNYV QK+
Sbjct: 291 LNDIFGHIVEFAGDQHGSRFIQQKLETATPEDRQKLFDEIYTNAYQLMTDVFGNYVTQKM 350
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + Q+ + + D +++++ + +G R V K L++L N Q+ +V A L P
Sbjct: 351 FEHGDQLQKAALAKKM---DGRVLQLSMQMYGCRVVQKALDHLLNEQRAKIV-AELEPHI 406
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG----IATDKSGCCVLQHCVEYS 323
+ K +N ++V+Q + + + D+ G +A GC VLQ E
Sbjct: 407 LECVKSSNANHVVQRIINTGPPQS-------IPDSFIGHVEELAKHPYGCRVLQKTFENL 459
Query: 324 KGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+ L+ E+ + L ED +GNYV+Q ++ + P+ ++ QL+G +F+ +K+
Sbjct: 460 DDKMKRSLLDEMHKCVIPLTEDQFGNYVIQSVITVGKPEDRNKVISQLKGRVTTFARHKF 519
Query: 384 GSNVVERCLLESGEEQSTRIIIELL-----RSPNVSMLLMHPFGNYVIQSALLVS 433
SNVVE+ L+ + +I EL+ + V MLL + N+ +Q+ + +
Sbjct: 520 ASNVVEKALIHADPADRRVLIDELIGMQPDGTNQVGMLLRDAYANFPLQTGMFAA 574
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 7/211 (3%)
Query: 225 NDDF-QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYC 283
ND F +V + HG R + + LE T P+ + + A L D G+YV Q
Sbjct: 292 NDIFGHIVEFAGDQHGSRFIQQKLETAT-PEDRQKLFDEIYTNAYQLMTDVFGNYVTQKM 350
Query: 284 VKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLA 343
+H L ++ ++ GC V+Q +++ QR ++VAE+ + L
Sbjct: 351 FEHGDQLQKAALAKKMDGRVLQLSMQMYGCRVVQKALDHLLNEQRAKIVAELEPHILECV 410
Query: 344 EDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRI 403
+ N+VVQ ++ PQ S+ GH + + YG V+++ ++ +
Sbjct: 411 KSSNANHVVQRIINTGPPQ---SIPDSFIGHVEELAKHPYGCRVLQKTFENLDDKMKRSL 467
Query: 404 IIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
+ E+ + V L FGNYVIQS + V K
Sbjct: 468 LDEMHKC--VIPLTEDQFGNYVIQSVITVGK 496
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
K+ LN++ + A D+ G +Q +E + R++L EI NA L D +GNYV
Sbjct: 288 KWELNDIFGHIVEFAGDQHGSRFIQQKLETATPEDRQKLFDEIYTNAYQLMTDVFGNYVT 347
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q + A+L ++++G + S YG VV++ L EQ +I+ EL P+
Sbjct: 348 QKMFEHGDQLQKAALAKKMDGRVLQLSMQMYGCRVVQKALDHLLNEQRAKIVAEL--EPH 405
Query: 413 VSMLLMHPFGNYVIQ 427
+ + N+V+Q
Sbjct: 406 ILECVKSSNANHVVQ 420
>gi|452846127|gb|EME48060.1| hypothetical protein DOTSEDRAFT_69859 [Dothistroma septosporum
NZE10]
Length = 945
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 147/292 (50%), Gaps = 14/292 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRD+ +I + DQ+G R +Q + + +E + +F E+ LM D FGNYV+QK
Sbjct: 530 LRDIYDHIAEFSGDQHGSRFIQTKLETANSDEKDRVFREIEPNAIPLMTDVFGNYVIQKF 589
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + +IL D Q+ + +G R V K L+++ QQ LV A L+
Sbjct: 590 FEHGDMSHK-KILAKKMQD--QVYSLSKQMYGCRVVQKALDHVLVEQQQQLV-AELKGHV 645
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++VIQ ++ +++ ++ GC V+Q C+E Q
Sbjct: 646 LDCVKDQNGNHVIQKAIERCHPSTIAFIIEAFVGQVPSLSIHAYGCRVIQRCLEKCDLPQ 705
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ ++AE++ + + D +GNYVVQH++A + + +L + + +S +K+ SNV
Sbjct: 706 KSMIMAELLQSIHTMISDQFGNYVVQHVVAHDEGECRSHVLDIVMNNLEGYSKHKFASNV 765
Query: 388 VERCLLESGEEQSTRIIIELL---------RSPNVSMLLMHPFGNYVIQSAL 430
VE+CL +S E +++ L+ SP + +++ FGNYVIQ L
Sbjct: 766 VEKCLEKSDERWRHEVVVRLVNNSQRRIEGESP-IVLMIKDNFGNYVIQKLL 816
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 145/340 (42%), Gaps = 25/340 (7%)
Query: 105 HNHNFDGLRSNGNELSSVPR-----NQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALA 159
H +N +G+ E VPR N SL+++R + D + DLR +
Sbjct: 400 HPYNGNGISQRSFEQQGVPRGSDLQNSAHGSLAVRRTPHVPDQ---QAYLDLRARPLMAV 456
Query: 160 K-----------DQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ DQY ++ + + + ID DP G+ V L+
Sbjct: 457 QLPVQSSYPAMYDQYAFQNAMQYTGVPSYMNMVPMGAPGIDASDGPREDPSGDGVQSALM 516
Query: 209 -ELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E S + R L D + + HG R + LE N + V + P A
Sbjct: 517 YEFKSNTKTKRYELRDIYD--HIAEFSGDQHGSRFIQTKLET-ANSDEKDRVFREIEPNA 573
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ L D G+YVIQ +H K L ++ D Y ++ GC V+Q +++ Q
Sbjct: 574 IPLMTDVFGNYVIQKFFEHGDMSHKKILAKKMQDQVYSLSKQMYGCRVVQKALDHVLVEQ 633
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+++LVAE+ + L +D GN+V+Q + P A ++ G S S + YG V
Sbjct: 634 QQQLVAELKGHVLDCVKDQNGNHVIQKAIERCHPSTIAFIIEAFVGQVPSLSIHAYGCRV 693
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQ 427
++RCL + Q + I+ ELL+S + ++ FGNYV+Q
Sbjct: 694 IQRCLEKCDLPQKSMIMAELLQS--IHTMISDQFGNYVVQ 731
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 12/148 (8%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G + +L+ YGCR +QR + + MI E++ + ++ D FGNYVVQ +V
Sbjct: 679 GQVPSLSIHAYGCRVIQRCLEKCDLPQKSMIMAELLQSIHTMISDQFGNYVVQHVVAHDE 738
Query: 213 EEQRTRILLMLTND---------DFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL 263
E R+ +L ++ N+ +V CL R +++ L N Q + +
Sbjct: 739 GECRSHVLDIVMNNLEGYSKHKFASNVVEKCLEKSDERWRHEVVVRLVNNSQRRIEGESP 798
Query: 264 RPGAVTLTKDTNGHYVIQYCVKHFSHED 291
V + KD G+YVIQ + + +D
Sbjct: 799 ---IVLMIKDNFGNYVIQKLLDTLNAQD 823
>gi|367003916|ref|XP_003686691.1| hypothetical protein TPHA_0H00470 [Tetrapisispora phaffii CBS 4417]
gi|357524993|emb|CCE64257.1| hypothetical protein TPHA_0H00470 [Tetrapisispora phaffii CBS 4417]
Length = 813
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 146/267 (54%), Gaps = 20/267 (7%)
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKEEI--EMIFVEVIDRVCELMIDPFGNYVVQKLVELC 211
N +LA DQ+GCR LQ+ + + I ++++ ++ EL++DPFGNY++QKL +
Sbjct: 224 NYASLATDQFGCRFLQKKLEYPAESNIVRDLLYEDIKSIFLELVLDPFGNYLIQKLCDYF 283
Query: 212 SEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL-RPGA--- 267
+ +Q+T ++ + FQ I +N +G R++ K+++ + N QI L++ R A
Sbjct: 284 TTDQKTSLIKSIYPHVFQ---ISINQYGTRSLQKIIDTVENDAQIDLIIRGFSRECASIN 340
Query: 268 --VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV--ADNCYGIATDKSGCCVLQHCVEYS 323
VTL D NG++VIQ C+ F ++++ + +N I+T K GCCVLQ + S
Sbjct: 341 QIVTLINDLNGNHVIQKCIFKFPTTKFDFIVDAIIHKNNIVLISTHKHGCCVLQKLLGIS 400
Query: 324 KGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ--ITASLLRQLEGHYVSFSCN 381
+L +II L D +GNY+VQ L + + + + +L G + +C+
Sbjct: 401 TLQHIFKLSTKIIEYLHFLINDQFGNYIVQFLFDIEELDFYLLSEIYNKLVGDICNLACS 460
Query: 382 KYGSNVVERCLLESGEEQSTRIIIELL 408
K+ SNV+E+ + E+ R++I+L+
Sbjct: 461 KFSSNVIEKFI-----EKLFRLLIKLI 482
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKE-EIEMIF------VEVIDRVCELMID 197
S ++ + ++ ++ +QYG R LQ+ + ++ + +I++I I+++ L+ D
Sbjct: 289 TSLIKSIYPHVFQISINQYGTRSLQKIIDTVENDAQIDLIIRGFSRECASINQIVTLIND 348
Query: 198 PFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQIS 257
GN+V+QK + + I+ + + + +V I + HG + KLL ++ Q I
Sbjct: 349 LNGNHVIQKCIFKFPTTKFDFIVDAIIHKN-NIVLISTHKHGCCVLQKLL-GISTLQHIF 406
Query: 258 LVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTK-YLLNEVADNCYG----IATDKSG 312
+ + L D G+Y++Q+ F E+ YLL+E+ + G +A K
Sbjct: 407 KLSTKIIEYLHFLINDQFGNYIVQFL---FDIEELDFYLLSEIYNKLVGDICNLACSKFS 463
Query: 313 CCVLQHCVEYSKGAQRERLVAEIIAN 338
V++ +E + RL+ ++I N
Sbjct: 464 SNVIEKFIE-----KLFRLLIKLITN 484
>gi|407397270|gb|EKF27682.1| pumilio protein, putative [Trypanosoma cruzi marinkellei]
Length = 827
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 160/309 (51%), Gaps = 22/309 (7%)
Query: 108 NFDGLRSNGNELSSVPRNQWMSSLSLKRNQWLQDSFDCS----SLRDLRGNIVALAKDQY 163
N G++ +G VP ++ + S + ++ D+ + + + + G V A+DQ
Sbjct: 367 NPAGVKPSGR---GVPYSEPLQPRSARLEEFRVDAMNGTISHWRISHILGYAVEFAQDQE 423
Query: 164 GCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLML 223
G R +QR + S +E++ +F E+ + L+ D FGNYV+QKL+E+ + Q L
Sbjct: 424 GSRFIQRAVESATHDEVDALFHEIFESPLVLVTDIFGNYVLQKLLEVGNARQLAHAATRL 483
Query: 224 TNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYC 283
N+ +V + L T+G R + K +E + P+ + ++LA L+ +D NG++V+Q C
Sbjct: 484 QNN---VVSLTLQTYGCRVIQKCIE-VMPPEGLDIILAELKGNVAKCIQDQNGNHVVQKC 539
Query: 284 VKHFSHEDTKYLLNEVADNCYGIATDKSGC----CVLQHCVEYSKGAQRERLVAEIIANA 339
V+ + + ++++ +AT GC C++QHC + Q E + +EI+
Sbjct: 540 VE-VTPQRCGFIVSAFTGRVMELATHAYGCRVIQCIMQHCPD-----QEEVIFSEILKCV 593
Query: 340 LLLAEDCYGNYVVQHLLA-LRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEE 398
LA+D YGNYV+QH+L ++ + L+ + FS K+ SNV+E+ + + +
Sbjct: 594 DTLAKDQYGNYVIQHVLQHMKDENKVTRVFNALKNDFYEFSKQKFASNVMEKIFVRADPQ 653
Query: 399 QSTRIIIEL 407
Q +I +L
Sbjct: 654 QRMELIQKL 662
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 136/294 (46%), Gaps = 25/294 (8%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L+ N+V+L YGCR +Q+ + +P E +++I E+ V + + D GN+VVQK VE+
Sbjct: 483 LQNNVVSLTLQTYGCRVIQKCIEVMPPEGLDIILAELKGNVAKCIQDQNGNHVVQKCVEV 542
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ R +++ +++ + + +G R + ++++ P Q ++ + + TL
Sbjct: 543 TPQ----RCGFIVSAFTGRVMELATHAYGCRVIQCIMQHC--PDQEEVIFSEILKCVDTL 596
Query: 271 TKDTNGHYVIQYCVKHFSHED-TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
KD G+YVIQ+ ++H E+ + N + ++ Y + K V++ + QR
Sbjct: 597 AKDQYGNYVIQHVLQHMKDENKVTRVFNALKNDFYEFSKQKFASNVMEKIFVRADPQQRM 656
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVE 389
L+ ++ A + V+ L R+P + + Y K G E
Sbjct: 657 ELIQKLCAPV-----EGVEAAPVEVLAFKRLPPVKKEETEKQRNGYA-----KKGRRDKE 706
Query: 390 RCLLESGEEQSTRIIIEL----LRSPNVSMLLMH-PFGNYVIQSALLVSKVRLF 438
R E +E + +IE+ +P++ L+M PF NYV Q L + V F
Sbjct: 707 R---EREKESAGGPVIEVHSDGKEAPSMLCLMMQNPFANYVAQRVLDAADVDQF 757
>gi|167392498|ref|XP_001740184.1| pumilio domain-containing protein C6G9.14 [Entamoeba dispar SAW760]
gi|165895862|gb|EDR23451.1| pumilio domain-containing protein C6G9.14, putative [Entamoeba
dispar SAW760]
Length = 437
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 145/274 (52%), Gaps = 8/274 (2%)
Query: 158 LAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRT 217
L KDQ G R +Q+ +EEI+ IF + ELMID FGNYV+QKL+E + +
Sbjct: 124 LCKDQQGSRKIQQFFEIATEEEIDQIFRLIYSDSIELMIDLFGNYVIQKLLEHGT---KK 180
Query: 218 RILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGH 277
+ L+ +V++ L+ +G R + K+LE L++ +++ ++ A ++ T +D NG+
Sbjct: 181 HVHLLFEKLQGNVVKLSLHMYGCRVIQKILEVLSS-EEVRIISAEIKSNVSTFIEDQNGN 239
Query: 278 YVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIA 337
+VIQ + S D ++++E+ + GC V+Q +E + +R+ +++
Sbjct: 240 HVIQKFIDFASEIDLNFMIDEIYTKAVEYSKHPYGCRVIQRLIEKNSQNCVKRVTDKLVE 299
Query: 338 NALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGE 397
L+ + YGNYV+QHL+ + ++ ++G +S KY SNVVE+C+
Sbjct: 300 YVWELSINQYGNYVIQHLIQYGTNEQRIKIVNNIKGKLYEYSMKKYSSNVVEKCIRCCES 359
Query: 398 EQSTRIIIELLRS----PNVSMLLMHPFGNYVIQ 427
+ ++ EL S ++ ++ P+ NYVIQ
Sbjct: 360 REQIILVNELCNSNVTNKQINEMICDPYANYVIQ 393
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 106/218 (48%), Gaps = 12/218 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+GN+V L+ YGCR +Q+ + L EE+ +I E+ V + D GN+V+QK
Sbjct: 186 FEKLQGNVVKLSLHMYGCRVIQKILEVLSSEEVRIISAEIKSNVSTFIEDQNGNHVIQKF 245
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPG 266
++ SE + M+ + V + +G R + +L+E N Q + V L
Sbjct: 246 IDFASE---IDLNFMIDEIYTKAVEYSKHPYGCRVIQRLIEK--NSQNCVKRVTDKLVEY 300
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L+ + G+YVIQ+ +++ ++E ++N + Y + K V++ C+ +
Sbjct: 301 VWELSINQYGNYVIQHLIQYGTNEQRIKIVNNIKGKLYEYSMKKYSSNVVEKCIRCCESR 360
Query: 327 QRERLVAEI----IANALL--LAEDCYGNYVVQHLLAL 358
++ LV E+ + N + + D Y NYV+Q L+ +
Sbjct: 361 EQIILVNELCNSNVTNKQINEMICDPYANYVIQRLIEM 398
>gi|298710813|emb|CBJ32228.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 543
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 152/296 (51%), Gaps = 19/296 (6%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G+ V +DQ+G R +Q+ + E+ E F E++ LM D FGNYVVQKL + S
Sbjct: 212 GHTVQFCRDQHGSRFIQQKLEVSTDEDKEAFFNEILPHTQSLMTDVFGNYVVQKLFDNGS 271
Query: 213 EEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTK 272
QR + L V++ L +G R V K LE + I+LV + + +
Sbjct: 272 SAQREALASFLVG---HAVQLSLQMYGCRVVQKALEYSSIDTLIALV-SEFCGQVMKCVQ 327
Query: 273 DTNGHYVIQYCVK----------HFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
D NG++V+Q C++ + H +++++ ++ GC V+Q +E+
Sbjct: 328 DQNGNHVVQKCIEVVSTTAKTEGQYLHSHIQFIIDGFVGQVEKLSMHAYGCRVIQRILEH 387
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
Q++ ++ EI + +L +D YGNYV+QH+L P L+R+++ + +S+S +K
Sbjct: 388 CIDEQKQVILEEIKDSFSVLIQDQYGNYVIQHVLKHGRPTDRGRLMREVKENLLSYSQHK 447
Query: 383 YGSNVVERCLLESGEEQSTRIIIELL--RSPNVSML---LMHPFGNYVIQSALLVS 433
+ SNVVE+CL +E+ +I LL S S+L + P+ NYV+Q + V+
Sbjct: 448 FASNVVEKCLQYGTKEERGVLIQHLLYGHSDGTSLLQVMVCDPYANYVVQKIIDVA 503
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 130/262 (49%), Gaps = 15/262 (5%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L G+ V L+ YGCR +Q+ + + + + E +V + + D GN+VVQK +E+
Sbjct: 282 LVGHAVQLSLQMYGCRVVQKALEYSSIDTLIALVSEFCGQVMKCVQDQNGNHVVQKCIEV 341
Query: 211 CSEEQRTRILLMLTNDDF-------QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL 263
S +T + ++ F Q+ ++ ++ +G R + ++LE+ + Q+ ++L +
Sbjct: 342 VSTTAKTEGQYLHSHIQFIIDGFVGQVEKLSMHAYGCRVIQRILEHCIDEQK-QVILEEI 400
Query: 264 RPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
+ L +D G+YVIQ+ +KH D L+ EV +N + K V++ C++Y
Sbjct: 401 KDSFSVLIQDQYGNYVIQHVLKHGRPTDRGRLMREVKENLLSYSQHKFASNVVEKCLQYG 460
Query: 324 KGAQRERLVAEII-----ANALL--LAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYV 376
+R L+ ++ +LL + D Y NYVVQ ++ + + +++ +++ H
Sbjct: 461 TKEERGVLIQHLLYGHSDGTSLLQVMVCDPYANYVVQKIIDVADQEQRQTIIMEIKAHAA 520
Query: 377 SFSCNKYGSNVVERCLLESGEE 398
+G +++ R SG++
Sbjct: 521 QLKRYTFGKHIISRLEKLSGKK 542
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 58/106 (54%), Gaps = 7/106 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI------DRVCELMI-DPFG 200
+R+++ N+++ ++ ++ +++ + KEE ++ ++ + ++M+ DP+
Sbjct: 433 MREVKENLLSYSQHKFASNVVEKCLQYGTKEERGVLIQHLLYGHSDGTSLLQVMVCDPYA 492
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKL 246
NYVVQK++++ +EQR I++ + QL R H I + KL
Sbjct: 493 NYVVQKIIDVADQEQRQTIIMEIKAHAAQLKRYTFGKHIISRLEKL 538
>gi|348675972|gb|EGZ15790.1| RNA-binding mating protein [Phytophthora sojae]
Length = 890
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 187/406 (46%), Gaps = 50/406 (12%)
Query: 56 SAYFSHLNVNDRIFDNPVHHFPLVENGFFSHPCQEAEPINQDSSILNLLHNHNFDGLRSN 115
+A + + +D++F P +PLV+ HP E + ++H G R
Sbjct: 459 AAEYRGMKPSDKMF-KPRPSYPLVD-----HPLYERQDFQNYMPRPQMMHRPKVGGPRRG 512
Query: 116 GNELSSVPRNQWMSSLSL--------KRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRH 167
E P SS SL K +W L ++G++ AKDQ G R
Sbjct: 513 EFEYFH-PVAHSYSSNSLLEEFNSAPKSEKW--------GLSSIKGHLFIFAKDQTGSRF 563
Query: 168 LQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDD 227
+Q+ + + F E+ LM D FGNYV+QK +E S +Q+ ++ ++T++
Sbjct: 564 IQQKLEKADEHVKAEAFSEIYPNSLLLMTDVFGNYVIQKFLEYGSADQQHALVELMTSN- 622
Query: 228 FQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHF 287
++ + L +G R + + LE +Q++L+ L+ + D NG++V+Q C++
Sbjct: 623 --MISLALQVYGCRVIQRALEVTRVEEQLALIRQ-LKGHVMKCVVDQNGNHVLQKCIEAA 679
Query: 288 S-----------------HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
S ED +++++ + ++T GC V+Q +E+ AQ
Sbjct: 680 SWKRAAEYNGLGPQRFVTGEDIQFIIDSFIGHAAALSTHSYGCRVIQRVLEHCAPAQIRP 739
Query: 331 LVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
L+ EII L +D +GNYVVQH+++ P +++ + +S +KY SNVVE
Sbjct: 740 LLNEIIYKCRDLVKDQFGNYVVQHVISHGEPDQRDIVMQAVLPEIARWSQHKYASNVVES 799
Query: 391 CLLESGEEQSTRIIIELLRSPNVSM------LLMHPFGNYVIQSAL 430
CL + + + ++I+ +L+ ++ H +GNYV+Q L
Sbjct: 800 CLEHATKGEISQIVDFILQCDESGASCPLLPMMKHMYGNYVVQKLL 845
>gi|402083794|gb|EJT78812.1| hypothetical protein GGTG_03909 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 911
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 145/287 (50%), Gaps = 13/287 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ +V + DQ G R +Q + S +E + +F E+ +LM D FGNYV+QK
Sbjct: 509 LKDIYNYVVEFSGDQQGSRFIQTKLESANSDEKDQVFREIEPNAVQLMKDLFGNYVIQKF 568
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ + + + N ++V + + R V K LE++ QQ LV L
Sbjct: 569 FEHGNQVHKKILAGQMKN---RMVDLSTQMYACRVVQKALEHVLVEQQAELV-KELEHHT 624
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+++ ++ NG++VIQ V+ + ++ V + ++T GC V+Q +E +G +
Sbjct: 625 LSIMQNQNGNHVIQKIVELLPRQHIGFIYEAVRGHLKELSTQTYGCRVVQRMLE--QGTE 682
Query: 328 RERLVA--EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
+ +V EI A+ L D YGNYVVQH++ P + + V FS +KY S
Sbjct: 683 EDTVVMMDEIYASMTALITDQYGNYVVQHIITNGSPADQRRTIDAVMAQVVQFSKHKYAS 742
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPN-----VSMLLMHPFGNYVIQ 427
N+VE+C++ E T+I L+R+ + L+ +GNYVIQ
Sbjct: 743 NIVEKCIVHGTAEDRTKISEILIRTGADGINPIHQLMKDQYGNYVIQ 789
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
+Y L ++ + + D+ G +Q +E + +++++ EI NA+ L +D +GNYV+
Sbjct: 506 RYELKDIYNYVVEFSGDQQGSRFIQTKLESANSDEKDQVFREIEPNAVQLMKDLFGNYVI 565
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q L Q++ V S Y VV++ L EQ ++ EL +
Sbjct: 566 QKFFEHGNQVHKKILAGQMKNRMVDLSTQMYACRVVQKALEHVLVEQQAELVKELEH--H 623
Query: 413 VSMLLMHPFGNYVIQ 427
++ + GN+VIQ
Sbjct: 624 TLSIMQNQNGNHVIQ 638
>gi|392595849|gb|EIW85172.1| ARM repeat-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 378
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 154/294 (52%), Gaps = 13/294 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI-DRVCELMIDPFGNYVVQK 206
LRD+ G +V + DQ+G R +Q+ + S +E + IF E++ L D FGNYV+QK
Sbjct: 52 LRDIYGYVVEFSGDQHGSRFIQQKLESASSDEKQRIFDEIVPSHTLALSQDVFGNYVIQK 111
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L E ++ Q++ + L ++ + L +G R + K +E + P+Q + L P
Sbjct: 112 LFEHGTQIQKSALANTLEG---HVLPLSLQMYGCRVIQKAIEFIL-PEQQGKFVRELEPH 167
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
KD NG++VIQ ++ + D ++ N Y ++T GC VLQ C+E+
Sbjct: 168 LARCVKDANGNHVIQKLIERVA-ADKLGFVHSFRGNVYDLSTHPYGCRVLQRCLEHLPDD 226
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
L+ E+ + L +D +GNYVVQ +L P + ++ +L G ++ + +K+ SN
Sbjct: 227 MTRSLMDELHKYVINLMQDQFGNYVVQFVLEKCQPHDRSLVITKLRGQLLNMARHKFASN 286
Query: 387 VVERCLLESGEEQSTRIIIELLR------SPNVSMLLMHPFGNYVIQSALLVSK 434
V E+ L+ + ++ +I E++ SP VSM + + NYV+Q AL V++
Sbjct: 287 VCEKALVTANYDERRTLIDEIITPKADGVSPIVSM-MKDQYANYVLQRALTVAE 339
>gi|444322732|ref|XP_004182007.1| hypothetical protein TBLA_0H02020 [Tetrapisispora blattae CBS 6284]
gi|387515053|emb|CCH62488.1| hypothetical protein TBLA_0H02020 [Tetrapisispora blattae CBS 6284]
Length = 916
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 162/338 (47%), Gaps = 55/338 (16%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
+L + G+ + KDQ+G R +Q +S E E+IF E+ D + EL D FGNYV+QK
Sbjct: 540 TLTSILGHTLEFCKDQHGSRFIQHQLSIASPSEREVIFNELRDHILELTNDVFGNYVIQK 599
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E S++Q+ +L N +++++ + R + K LE + Q+I+LV+ L
Sbjct: 600 FFEFGSDKQKEILLSFFKN---KILKLSTQMYACRVIQKALEFINLNQRIALVM-ELSNN 655
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ + KD NG++VIQ ++ + ++LN + Y ++T GC V+Q +++ A
Sbjct: 656 ILQMIKDQNGNHVIQKSIETIPIKFLPFILNSLIGQIYHLSTHAYGCRVIQRLLKFGTVA 715
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLAL---------------------------- 358
+ ++ E+ L L +D YGNYV+QH+L
Sbjct: 716 DQSIILDELQNFILYLIQDQYGNYVIQHILETNPMSKDSSKDADADADASSSSKEISPAT 775
Query: 359 ----------RVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL 408
++ Q ++ + + V FS +K+ SNVVE+ ++ E Q ++ ++L
Sbjct: 776 DMATVSDLCPKMIQTKQEIIEIVSNNIVEFSKHKFASNVVEKAIVYGNEPQRKLLMSKIL 835
Query: 409 ------------RSPNVSMLLMHPFGNYVIQSALLVSK 434
SP ++++L F NYV+Q ++VSK
Sbjct: 836 PKNESEASNLQDNSP-MTLMLRDQFANYVVQKLVIVSK 872
>gi|366992003|ref|XP_003675767.1| hypothetical protein NCAS_0C04130 [Naumovozyma castellii CBS 4309]
gi|342301632|emb|CCC69403.1| hypothetical protein NCAS_0C04130 [Naumovozyma castellii CBS 4309]
Length = 831
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 167/333 (50%), Gaps = 44/333 (13%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEI--EMIFVEVIDRVCELMIDPFGNY 202
+ L DL + V LA DQ+GCR LQ+ + S + +I ++++ ++ + +L++DPFGNY
Sbjct: 168 STPLEDL--DYVKLATDQFGCRFLQKKLESNAESDIVRDLMYEQIKPYILDLILDPFGNY 225
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
++QKL + + QRT ++ + FQ I +N +G R++ K+++ + + QI ++
Sbjct: 226 LIQKLCDYLTTAQRTDMIQSIFPQVFQ---ISINQYGTRSLQKIIDTVDSDVQIETIIKG 282
Query: 263 LR------PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVAD--NCYGIATDKSGCC 314
VTL D NG++VIQ C+ F ++++ + + N I+T K GCC
Sbjct: 283 FSQEYTSIQQVVTLINDLNGNHVIQKCIFKFPPSTFGFVIDAIVEKNNIITISTHKHGCC 342
Query: 315 VLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALR------VPQITASLL 368
VLQ + Q + +II L D +GNY++Q LL + +P+I
Sbjct: 343 VLQKLLSVCTLQQIFTISVKIIQFLPGLINDQFGNYIIQFLLDIDDLDYYLLPEI----F 398
Query: 369 RQLEGHYVSFSCNKYGSNVVERCL----------LESGE-------EQSTRIIIELLR-- 409
++L SC K+ SNVVE+ + L+ + + S I++ ++
Sbjct: 399 KRLSNELCQLSCLKFSSNVVEKFIKKLFRNVKKYLQENQSNNDEVVQNSMNILLSIVDIF 458
Query: 410 SPNVSMLLMHPFGNYVIQSALLVSKVRLFSSPP 442
+ N+++L+ FGNY +Q+ L V L P
Sbjct: 459 TLNLNVLIRDNFGNYALQTLLDVKNYSLMLDYP 491
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 100/228 (43%), Gaps = 12/228 (5%)
Query: 226 DDFQLVRICLNTHGIRAVLKLLENLTNPQQI-SLVLAALRPGAVTLTKDTNGHYVIQYCV 284
+D V++ + G R + K LE+ + L+ ++P + L D G+Y+IQ
Sbjct: 172 EDLDYVKLATDQFGCRFLQKKLESNAESDIVRDLMYEQIKPYILDLILDPFGNYLIQKLC 231
Query: 285 KHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVE-YSKGAQRERLVAEI------IA 337
+ + ++ + + I+ ++ G LQ ++ Q E ++ I
Sbjct: 232 DYLTTAQRTDMIQSIFPQVFQISINQYGTRSLQKIIDTVDSDVQIETIIKGFSQEYTSIQ 291
Query: 338 NALLLAEDCYGNYVVQHLLALRVPQITASLLRQL--EGHYVSFSCNKYGSNVVERCLLES 395
+ L D GN+V+Q + P ++ + + + ++ S +K+G V+++ L
Sbjct: 292 QVVTLINDLNGNHVIQKCIFKFPPSTFGFVIDAIVEKNNIITISTHKHGCCVLQKLLSVC 351
Query: 396 GEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLFSSPPI 443
+Q I +++++ + L+ FGNY+IQ L + + + P I
Sbjct: 352 TLQQIFTISVKIIQF--LPGLINDQFGNYIIQFLLDIDDLDYYLLPEI 397
>gi|134107804|ref|XP_777513.1| hypothetical protein CNBB0870 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260205|gb|EAL22866.1| hypothetical protein CNBB0870 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 673
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 149/295 (50%), Gaps = 20/295 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G+IV A DQ+G R +Q+ + + E+ + +F E+ +LM D FGNYV QK+
Sbjct: 291 LNDIFGHIVEFAGDQHGSRFIQQKLETATPEDRQKLFDEIYTNAYQLMTDVFGNYVTQKM 350
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + Q+ + + D +++++ + +G R V K L++L N Q+ +V A L P
Sbjct: 351 FEHGDQLQKAALAKKM---DGRVLQLSMQMYGCRVVQKALDHLLNEQRAKIV-AELEPHI 406
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG----IATDKSGCCVLQHCVEYS 323
+ K +N ++V+Q + + + D+ G +A GC VLQ E
Sbjct: 407 LECVKSSNANHVVQRIINTGPPQ-------SIPDSFIGHVEELAKHPYGCRVLQKTFENL 459
Query: 324 KGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+ L+ E+ + L ED +GNYV+Q ++ + P+ ++ QL G +F+ +K+
Sbjct: 460 DDKMKRSLLDEMHKCVISLTEDQFGNYVIQSVITVGKPEDRNKVISQLRGRVTTFARHKF 519
Query: 384 GSNVVERCLLESGEEQSTRIIIELL-----RSPNVSMLLMHPFGNYVIQSALLVS 433
SNVVE+ L+ + +I EL+ + V MLL + N+ +Q+ + +
Sbjct: 520 ASNVVEKALIHADPADRRVLIDELIGMQLDGTNQVGMLLRDAYANFPLQTGMFAA 574
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 7/211 (3%)
Query: 225 NDDF-QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYC 283
ND F +V + HG R + + LE T P+ + + A L D G+YV Q
Sbjct: 292 NDIFGHIVEFAGDQHGSRFIQQKLETAT-PEDRQKLFDEIYTNAYQLMTDVFGNYVTQKM 350
Query: 284 VKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLA 343
+H L ++ ++ GC V+Q +++ QR ++VAE+ + L
Sbjct: 351 FEHGDQLQKAALAKKMDGRVLQLSMQMYGCRVVQKALDHLLNEQRAKIVAELEPHILECV 410
Query: 344 EDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRI 403
+ N+VVQ ++ PQ S+ GH + + YG V+++ E+ +++ R
Sbjct: 411 KSSNANHVVQRIINTGPPQ---SIPDSFIGHVEELAKHPYGCRVLQKTF-ENLDDKMKRS 466
Query: 404 IIELLRSPNVSMLLMHPFGNYVIQSALLVSK 434
+++ + +S L FGNYVIQS + V K
Sbjct: 467 LLDEMHKCVIS-LTEDQFGNYVIQSVITVGK 496
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
K+ LN++ + A D+ G +Q +E + R++L EI NA L D +GNYV
Sbjct: 288 KWELNDIFGHIVEFAGDQHGSRFIQQKLETATPEDRQKLFDEIYTNAYQLMTDVFGNYVT 347
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q + A+L ++++G + S YG VV++ L EQ +I+ EL P+
Sbjct: 348 QKMFEHGDQLQKAALAKKMDGRVLQLSMQMYGCRVVQKALDHLLNEQRAKIVAEL--EPH 405
Query: 413 VSMLLMHPFGNYVIQ 427
+ + N+V+Q
Sbjct: 406 ILECVKSSNANHVVQ 420
>gi|363756532|ref|XP_003648482.1| hypothetical protein Ecym_8395 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891682|gb|AET41665.1| Hypothetical protein Ecym_8395 [Eremothecium cymbalariae
DBVPG#7215]
Length = 892
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 135/250 (54%), Gaps = 21/250 (8%)
Query: 158 LAKDQYGCRHLQRTMSSLPKEEIE---MIFVEVIDRVCELMIDPFGNYVVQKLVELCSEE 214
LA DQYGCR LQR + + P E E +++ ++ +L++DPFGNY++QKL E + E
Sbjct: 220 LATDQYGCRFLQRKLEN-PAESDEVRDLMYKQIKPYFLDLILDPFGNYLIQKLCEYLTTE 278
Query: 215 QRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR------PGAV 268
Q+T ++ + + FQ I +N +G R++ K+++ + Q I ++++ V
Sbjct: 279 QKTSMIQDIYSHVFQ---ISINQYGTRSLQKIIDTVETEQHIDMIVSGFSQQFTSIAQVV 335
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVA--DNCYGIATDKSGCCVLQHCVEYSKGA 326
TL D NG++VIQ C+ F ++++ + DN I+T K GCCVLQ +
Sbjct: 336 TLINDLNGNHVIQKCIFKFQPTKFDFIIDAIVEKDNIIKISTHKHGCCVLQKLLSVCTLQ 395
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYV----SFSCNK 382
Q ++ +II L D +GNY++Q L ++ ++ LL ++ G SC K
Sbjct: 396 QIFKISVKIIQYLPGLINDQFGNYIIQFLFDIK--ELDFYLLGEIFGKLFHELCQLSCLK 453
Query: 383 YGSNVVERCL 392
+ SNVVE+ +
Sbjct: 454 FSSNVVEKFI 463
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Query: 306 IATDKSGCCVLQHCVEYSKGAQ--RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQI 363
+ATD+ GC LQ +E + R+ + +I L L D +GNY++Q L +
Sbjct: 220 LATDQYGCRFLQRKLENPAESDEVRDLMYKQIKPYFLDLILDPFGNYLIQKLCEYLTTEQ 279
Query: 364 TASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIII-----ELLRSPNVSMLLM 418
S+++ + H S N+YG+ +++ + EQ +I+ + V L+
Sbjct: 280 KTSMIQDIYSHVFQISINQYGTRSLQKIIDTVETEQHIDMIVSGFSQQFTSIAQVVTLIN 339
Query: 419 HPFGNYVIQSALL 431
GN+VIQ +
Sbjct: 340 DLNGNHVIQKCIF 352
>gi|402590419|gb|EJW84349.1| hypothetical protein WUBG_04743 [Wuchereria bancrofti]
Length = 399
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 161/321 (50%), Gaps = 23/321 (7%)
Query: 124 RNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMI 183
R+ + RN LQ L DL ++V A+DQ+G R +Q+ + +E + +
Sbjct: 32 RSHLLDDFRNNRNPHLQ-------LIDLGKHVVEFAQDQHGSRFIQQKLERASLKEKQAV 84
Query: 184 FVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTND-DFQLVRICLNTHGIRA 242
F EV LM D FGNYV+QK E + EQ+ +LTN ++ + L +G R
Sbjct: 85 FDEVALHAQSLMTDVFGNYVIQKFFEYGTSEQKN----ILTNAVKGNVMSLALQMYGCRV 140
Query: 243 VLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV--- 299
+ K LE++ QQ+ +L + + KD NG++V+Q ++ +++++ +
Sbjct: 141 IQKALESIEPEQQME-ILKEMEGQVLKCVKDQNGNHVVQKVIERVDASRLQFIIDALVPA 199
Query: 300 ADNCY--GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLA 357
DN ++T GC V+Q +E+ Q+ ++ ++ + L D YGNYV+QH++
Sbjct: 200 GDNMTVCNLSTHPYGCRVIQRVLEHCTDEQKRPVLDQLHKHVKSLIVDQYGNYVIQHVIE 259
Query: 358 LRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN----- 412
+ ++ Q++G + F+ +K+ SNV+E+CL +I E+ +PN
Sbjct: 260 HGSLEDRDRIVNQVKGDVLRFAQHKFASNVIEKCLTCGEPHHKNALITEVCGNPNDIATP 319
Query: 413 VSMLLMHPFGNYVIQSALLVS 433
+ M++ F NYV+Q L V+
Sbjct: 320 LLMMMKDQFANYVVQKMLDVA 340
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 128/249 (51%), Gaps = 10/249 (4%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
++GN+++LA YGCR +Q+ + S+ E+ I E+ +V + + D GN+VVQK++E
Sbjct: 124 VKGNVMSLALQMYGCRVIQKALESIEPEQQMEILKEMEGQVLKCVKDQNGNHVVQKVIER 183
Query: 211 CSEEQRTRIL--LMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAV 268
+ I+ L+ D+ + + + +G R + ++LE+ T+ Q+ VL L
Sbjct: 184 VDASRLQFIIDALVPAGDNMTVCNLSTHPYGCRVIQRVLEHCTDEQK-RPVLDQLHKHVK 242
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQR 328
+L D G+YVIQ+ ++H S ED ++N+V + A K V++ C+ + +
Sbjct: 243 SLIVDQYGNYVIQHVIEHGSLEDRDRIVNQVKGDVLRFAQHKFASNVIEKCLTCGEPHHK 302
Query: 329 ERLVAEIIANA-------LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCN 381
L+ E+ N L++ +D + NYVVQ +L + + ++ ++ H +
Sbjct: 303 NALITEVCGNPNDIATPLLMMMKDQFANYVVQKMLDVADSALRKKMMLAIKPHIPALRKY 362
Query: 382 KYGSNVVER 390
YG +++ +
Sbjct: 363 NYGKHIITK 371
>gi|145509346|ref|XP_001440614.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407837|emb|CAK73217.1| unnamed protein product [Paramecium tetraurelia]
Length = 648
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 159/301 (52%), Gaps = 16/301 (5%)
Query: 136 NQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELM 195
++W +D +L +RGN+V K Q+G R +Q+ ++ + E++ + E+ + +LM
Sbjct: 319 DEWTED---LQNLEQIRGNVVNFVKTQHGSRLIQKYFTTCTQIELDQLLQEIGPHLPDLM 375
Query: 196 IDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ 255
IDP+ NY+ L + C+ QR IL + N +LV I + G A+ L+ ++ Q+
Sbjct: 376 IDPYANYMFGSLSQSCAPHQRLYILQTIGN---RLVDIACDKKGTHAIQSLVSLISCKQE 432
Query: 256 ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCV 315
+V +++ + LT D+ G ++I+ + FS + Y+ +++ D + + G CV
Sbjct: 433 EEMVENSIKNNIIPLTLDSQGTHLIKKIIARFSEDRLNYIFHKLMDRFIQVVNHQFGLCV 492
Query: 316 LQHCV-EYSKGAQRERLVAEIIANAL-LLAEDCYGNYVVQHLL----ALRVPQITASLLR 369
L+ + ++ ++ ++ + + L + +D +GNY VQH++ LR I +L
Sbjct: 493 LKDLITKFKNNLEKSAIIINRMKDHLDEIIQDPFGNYGVQHVIDVYGDLRCNCIIDKILL 552
Query: 370 QLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSA 429
+L + S +KY SNVVE+C+LE+ + R I +L + L+ + FG +V+Q A
Sbjct: 553 KL----IQLSIHKYSSNVVEKCILETSPKTQKRFIKQLSQDIICLELMKNKFGTFVLQKA 608
Query: 430 L 430
L
Sbjct: 609 L 609
>gi|256082284|ref|XP_002577388.1| pumilio [Schistosoma mansoni]
gi|350645490|emb|CCD59842.1| pumilio, putative [Schistosoma mansoni]
Length = 1309
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 144/281 (51%), Gaps = 10/281 (3%)
Query: 134 KRNQWLQDSFDCSS------LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEV 187
R+Q L+D + S+ L +LR ++V A+DQ+G R +Q+ + + E +F E+
Sbjct: 916 SRSQLLEDFRNSSARFQHMHLSELRDHMVEFARDQHGSRFIQQKLETATTAEKNSVFNEI 975
Query: 188 IDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
+ +LM D FGNYV+QK E ++EQ+ + L +V +G R + K L
Sbjct: 976 LPHSGKLMTDVFGNYVIQKFFEFGTKEQKELLSQRLQG---HVVEFATQMYGCRVIQKAL 1032
Query: 248 ENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIA 307
E++ +I +V LRP KD NG++VIQ C++ + ++++ ++
Sbjct: 1033 ESVPAEAKIHIV-GELRPFVTRCVKDQNGNHVIQKCIECVPPSELDFIISAFRGQVVLLS 1091
Query: 308 TDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASL 367
+ GC V+Q +E+ Q ++ E+ L +D YGNYV+QH+L + + +
Sbjct: 1092 SHPYGCRVIQRILEHCLPEQTRPILDELHKGVEHLVKDQYGNYVIQHVLEHGSNEDKSRI 1151
Query: 368 LRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL 408
++ L G + S +K+ SNV+E+ + + + +I E+L
Sbjct: 1152 IQNLRGRVCALSSHKFASNVMEKAIANAVPSERAVLIEEIL 1192
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 112/229 (48%), Gaps = 25/229 (10%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L+G++V A YGCR +Q+ + S+P E I E+ V + D GN+V+QK +E
Sbjct: 1011 LQGHVVEFATQMYGCRVIQKALESVPAEAKIHIVGELRPFVTRCVKDQNGNHVIQKCIEC 1070
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ I+ Q+V + + +G R + ++LE+ P+Q +L L G L
Sbjct: 1071 VPPSELDFIISAFRG---QVVLLSSHPYGCRVIQRILEHCL-PEQTRPILDELHKGVEHL 1126
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
KD G+YVIQ+ ++H S+ED ++ + +++ K V++ + + ++R
Sbjct: 1127 VKDQYGNYVIQHVLEHGSNEDKSRIIQNLRGRVCALSSHKFASNVMEKAIANAVPSERAV 1186
Query: 331 LVAEI--------------------IANALL-LAEDCYGNYVVQHLLAL 358
L+ EI I+++L+ + +D Y NYVVQ +L L
Sbjct: 1187 LIEEILHPISNVNINGDTSSVTTNNISSSLVDMMKDQYANYVVQRMLEL 1235
>gi|50309115|ref|XP_454563.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643698|emb|CAG99650.1| KLLA0E13597p [Kluyveromyces lactis]
Length = 822
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 137/258 (53%), Gaps = 19/258 (7%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIE---MIFVEVIDRVCELMIDPFGNYVV 204
L+DL + V L+ DQYGCR LQR + + P+E + +IF V + +L++DPFGNY++
Sbjct: 176 LKDL--DYVKLSTDQYGCRFLQRKLET-PQESDQVRDLIFENVNNFFLDLILDPFGNYLI 232
Query: 205 QKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR 264
QKL + + +Q+T ++ + FQ I +N +G R++ K+++ + + I +++
Sbjct: 233 QKLCDYLTTDQKTAMIKDIYPSVFQ---ISINQYGTRSLQKIIDTVETQEHIDMIIRGFS 289
Query: 265 ------PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVA--DNCYGIATDKSGCCVL 316
VTL D NG++VIQ C+ F + ++++ + DN I+T K GCCVL
Sbjct: 290 QEHTSIEQVVTLINDLNGNHVIQKCIFKFQPANFDFIIDAIVNNDNIITISTHKHGCCVL 349
Query: 317 QHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ--ITASLLRQLEGH 374
Q + Q ++ +II L D +GNY++Q L ++ + +L
Sbjct: 350 QKLLSVCTLQQIFKISVKIIQYLPSLINDQFGNYIIQFLFDIKELDFYLLGETFNKLSQK 409
Query: 375 YVSFSCNKYGSNVVERCL 392
SC K+ SNVVE+ +
Sbjct: 410 LCQLSCLKFSSNVVEKYI 427
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 7/133 (5%)
Query: 306 IATDKSGCCVLQHCVEYSKGAQRER-LVAEIIANALL-LAEDCYGNYVVQHLLALRVPQI 363
++TD+ GC LQ +E + + + R L+ E + N L L D +GNY++Q L
Sbjct: 184 LSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTTDQ 243
Query: 364 TASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSM-----LLM 418
++++ + S N+YG+ +++ + ++ +II + S+ L+
Sbjct: 244 KTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVTLIN 303
Query: 419 HPFGNYVIQSALL 431
GN+VIQ +
Sbjct: 304 DLNGNHVIQKCIF 316
>gi|393220554|gb|EJD06040.1| ARM repeat-containing protein [Fomitiporia mediterranea MF3/22]
Length = 486
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 154/292 (52%), Gaps = 13/292 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVC-ELMIDPFGNYVVQK 206
L+D+ G IV + DQ+G R +Q+ + + +E +++F E++ +L+ D FGNYV+QK
Sbjct: 132 LKDIFGYIVEFSGDQHGSRFIQQKLETATSDEKQIVFDEIVPGAALQLIQDVFGNYVIQK 191
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L E ++ Q+T ++ + ++ + L +G R V K +E + QQ S V L
Sbjct: 192 LFEHGTQVQKT---ILANAMEGHILALSLQMYGCRVVQKAIEFVLPEQQASFV-KELEGH 247
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+ KD NG++VIQ ++ S E ++ N Y ++T GC VLQ E+ K
Sbjct: 248 VLRCVKDANGNHVIQKLLERVSPERLGFV-QAFKGNVYELSTHPYGCRVLQRVFEHMKEE 306
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q L+ E+ + L +D +GNYVVQ +L Q ++ +L G + + +K+ SN
Sbjct: 307 QTRPLLDELHKYTINLMQDQFGNYVVQFVLEHGPVQDRLLIISKLRGQMLQMAKHKFASN 366
Query: 387 VVERCLLESGEEQSTRIIIELLRSPN------VSMLLMHPFGNYVIQSALLV 432
V E+ L+ + E + R+++E + +P + ++ + NYV+Q AL V
Sbjct: 367 VCEKALVMADSE-NRRLLVEEMITPKADGVSPIVTMMKDQYANYVLQRALTV 417
>gi|71662154|ref|XP_818088.1| pumilio/PUF RNA binding protein 4 [Trypanosoma cruzi strain CL
Brener]
gi|18958720|gb|AAL82701.1|AC113243_1 Tcc1a22.1 [Trypanosoma cruzi]
gi|70883318|gb|EAN96237.1| pumilio/PUF RNA binding protein 4, putative [Trypanosoma cruzi]
Length = 973
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 158/329 (48%), Gaps = 48/329 (14%)
Query: 152 RGNIVALAKDQYGCRHLQRTMSSLP--KEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
RG++V +A DQ+GCR LQ + P +E++ + E++ + ++M P+GN++VQKL+E
Sbjct: 499 RGHVVEMASDQHGCRELQSVLERYPYRSQEVQCVVNELLPCLPQVMASPYGNFLVQKLLE 558
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
+ +E R +L + L + ++ HG AV KL+++L + +++ +V AAL+ G +
Sbjct: 559 IAPDEDRLHMLSQHLSGS--LCEVAVSPHGNYAVQKLIDSLRSRREVEVVCAALQRGVLM 616
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
L D NG +V+Q ++ +D ++ + + + DK GCCV+Q C++ + +
Sbjct: 617 LMNDLNGGHVVQKLLQCLP-QDVAFVYDAIVEKTIDFCNDKQGCCVVQKCIDSAPPERLP 675
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLL----ALRVPQITASLLRQLEGHYVSFSCNKYGS 385
+L ++ + L L+ YGNYVV HL+ A+ + + NK+ S
Sbjct: 676 QLQEAVLKHFLPLSMSPYGNYVVTHLIRNCDAMNQRHVVDRAAVCVGPALKMLCTNKFAS 735
Query: 386 NVVERCLLESGEEQSTRIIIELLR------------------------------------ 409
NVVE L EE ++ +L+
Sbjct: 736 NVVEIILSLCSEEAKVQLCRSILQGSNEKTGFSFQNNIPGNSQDVPFSSPSSSSLPQHVL 795
Query: 410 ---SPNVSMLLMHPFGNYVIQSALLVSKV 435
+P +S + ++ FGNYV+Q L V V
Sbjct: 796 HHDTPTLSAIALNQFGNYVVQKMLSVLPV 824
>gi|171686492|ref|XP_001908187.1| hypothetical protein [Podospora anserina S mat+]
gi|170943207|emb|CAP68860.1| unnamed protein product [Podospora anserina S mat+]
Length = 752
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 145/288 (50%), Gaps = 9/288 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G IV + DQ+G R +Q + + ++ +F E+ LM D FGNYV+QK
Sbjct: 354 LKDIYGFIVEFSGDQHGSRFIQNKLETANSDDKNQVFHEIEPNAIVLMKDLFGNYVIQKF 413
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ + + ++V + + + R V K L ++ QQ LV L P
Sbjct: 414 FEHGNQAQKQVLAAAMKG---KVVELSMQMYACRVVQKALSHVLVEQQAELV-KELEPEI 469
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+T+ KD NG++V+Q ++ + ++ + +++ GC V+Q +E+ A
Sbjct: 470 LTIVKDQNGNHVVQKIIQTVPRQHIGFIFDCFRGRVSELSSHAYGCRVIQRALEHGNEAD 529
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ ++ E+ + A +L D YGNYV QH++ P + ++ + FS +K+ SNV
Sbjct: 530 KQSIMKELHSCAQMLIMDQYGNYVTQHVITDGSPDDRSKMVALVMSQLPIFSKHKFASNV 589
Query: 388 VERCLLESGEEQSTRIIIELL-RSPNVSMLLM----HPFGNYVIQSAL 430
VE+C+ +Q I + R + + L+ FGNYV+Q+ L
Sbjct: 590 VEKCIKHGTADQQRDIRDRFMSRGDDGNSFLVSLTKDQFGNYVLQTLL 637
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 14/163 (8%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
FDC RG + L+ YGCR +QR + + + + I E+ L++D +GNY
Sbjct: 498 FDC-----FRGRVSELSSHAYGCRVIQRALEHGNEADKQSIMKELHSCAQMLIMDQYGNY 552
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
V Q ++ S + R++++ ++ + QL + V K +++ T QQ +
Sbjct: 553 VTQHVITDGSPDDRSKMVALVMS---QLPIFSKHKFASNVVEKCIKHGTADQQRDIRDRF 609
Query: 263 LRPGA------VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV 299
+ G V+LTKD G+YV+Q + +D L+NEV
Sbjct: 610 MSRGDDGNSFLVSLTKDQFGNYVLQTLLSELQGQDRDVLVNEV 652
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 93/212 (43%), Gaps = 11/212 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+++L I+ + KDQ G +Q+ + ++P++ I IF RV EL +G V+Q+
Sbjct: 462 VKELEPEILTIVKDQNGNHVVQKIIQTVPRQHIGFIFDCFRGRVSELSSHAYGCRVIQRA 521
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E +E + I+ L + L+ + + V+ + ++LV++ L
Sbjct: 522 LEHGNEADKQSIMKELHSCAQMLIMDQYGNYVTQHVITDGSPDDRSKMVALVMSQL---- 577
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTK-----YLLNEVADNCY--GIATDKSGCCVLQHCV 320
+K V++ C+KH + + + ++ N + + D+ G VLQ +
Sbjct: 578 PIFSKHKFASNVVEKCIKHGTADQQRDIRDRFMSRGDDGNSFLVSLTKDQFGNYVLQTLL 637
Query: 321 EYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
+G R+ LV E+ + + C G +
Sbjct: 638 SELQGQDRDVLVNEVRPLLASIKKMCTGKQIA 669
>gi|413942338|gb|AFW74987.1| hypothetical protein ZEAMMB73_090092 [Zea mays]
Length = 919
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 179/410 (43%), Gaps = 72/410 (17%)
Query: 84 FSHPCQEAEPINQDSSILNLLHNHNFD-GLRSNGNELSSVPRNQWMSSLSLKRNQWLQDS 142
+ P + PI S + + N F G+R+ GN S W S +S K + L S
Sbjct: 464 LTSPVLPSSPIAPGSPLRHGDRNMRFPPGMRNFGNSFGS-----WNSGMSGKMDANLMPS 518
Query: 143 F---------DCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE 193
L ++ G++V + DQYG R +Q+ + + EE +M+F E++ +
Sbjct: 519 LLEEFKSNKSKSYELSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALT 578
Query: 194 LMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNP 253
LM D FGNYVVQK E S Q + L +++ + L +G R + K +E +
Sbjct: 579 LMTDVFGNYVVQKFFEHGSTAQIKELAGQLIG---RVLALSLQMYGCRVIQKAIEVVDLD 635
Query: 254 QQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGC 313
Q +V A L + +D NG++VIQ C++ +++++ ++T GC
Sbjct: 636 LQTKMV-AELEGHVMRCVRDQNGNHVIQKCIECIPQHAIEFIVSTFYGQVVMLSTHPYGC 694
Query: 314 CVLQHCVEYSKGAQRERLVA-EIIANALLLAEDCYGNYVVQ------------------- 353
V+Q +E+ + ++++ EI+ + LLA+D YGNYVVQ
Sbjct: 695 RVIQRVLEHCDDPKTQQIMMDEILQSVCLLAQDQYGNYVVQYCCLFHVAMCCAAVWNRKQ 754
Query: 354 -----------------------------HLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
H+L P ++++ +L G V S K+
Sbjct: 755 QERCEYCCLSHVAMCCAAVWNRKQQERCEHVLEHGKPHERSAIIEKLIGQVVQMSQQKFA 814
Query: 385 SNVVERCLLESGEEQSTRIIIELLRSPNVS----MLLMHPFGNYVIQSAL 430
SNV+E+CL + +I E+L S + S +++ F NYV+Q L
Sbjct: 815 SNVIEKCLAFGNPVERQVLIGEMLGSTSESEPLEVMMKDQFANYVVQKVL 864
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE------LMIDPFGN 201
+ L G +V +++ ++ +++ ++ E +++ E++ E +M D F N
Sbjct: 798 IEKLIGQVVQMSQQKFASNVIEKCLAFGNPVERQVLIGEMLGSTSESEPLEVMMKDQFAN 857
Query: 202 YVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
YVVQK++E C ++QR IL + L + H + V KL+
Sbjct: 858 YVVQKVLETCDDQQREMILTRIKTHLNTLKKYTYGKHIVARVEKLV 903
>gi|444320890|ref|XP_004181101.1| hypothetical protein TBLA_0F00380 [Tetrapisispora blattae CBS 6284]
gi|387514145|emb|CCH61582.1| hypothetical protein TBLA_0F00380 [Tetrapisispora blattae CBS 6284]
Length = 784
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 165/324 (50%), Gaps = 36/324 (11%)
Query: 140 QDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEI--EMIFVEVIDRVCELMID 197
QD + + + V+LA+DQYGCR LQ+ + S K ++ + +F E+ + +L++D
Sbjct: 48 QDELEIEETDKIDLDFVSLARDQYGCRFLQKKLESNGKNQLFKDQLFEELKPILLDLIMD 107
Query: 198 PFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLE--NLTNPQQ 255
PFGNY++QKL+ Q LL L + +F I N G R++ K+++ ++ +P Q
Sbjct: 108 PFGNYLIQKLIVYLDSNQIID-LLNLIHSNFG--AISSNQFGTRSLQKVIDSVDIDDPVQ 164
Query: 256 ISLVLAALRP-----GAVTLTKDTNGHYVIQYCVKHFSHE--DTKYLLNEV--ADNCYGI 306
L+L + + L D NG++VIQ + F + +L++ + N I
Sbjct: 165 TELLLMGFKEYLSNDQLINLINDLNGNHVIQKLIFKFKDSILNLDFLIDSICLGTNIIKI 224
Query: 307 ATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRV------ 360
+T K GCCVLQ + + +Q E++ I++N + L + +GNY++Q +L+ +
Sbjct: 225 STHKHGCCVLQKLLNLIQLSQFEKISIRILSNLIDLINNQFGNYIIQFILSKKFNCLEFQ 284
Query: 361 ---PQITASLLRQLEGHYVSFSCNKYGSNVVE---RCLLESGEE------QSTRIIIELL 408
+I + L + SC K+ SNV+E + L S Q + III+++
Sbjct: 285 VIHEKILIEFYQNLSFQFYQLSCLKFSSNVIENYIKILFTSWTSSQDNIIQLSNIIIKII 344
Query: 409 R--SPNVSMLLMHPFGNYVIQSAL 430
+ N++ L+ +GNY +Q+ L
Sbjct: 345 DCFTINLNSLIKDNYGNYTLQTLL 368
>gi|256082282|ref|XP_002577387.1| pumilio [Schistosoma mansoni]
gi|350645489|emb|CCD59841.1| pumilio, putative [Schistosoma mansoni]
Length = 1501
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 144/281 (51%), Gaps = 10/281 (3%)
Query: 134 KRNQWLQDSFDCSS------LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEV 187
R+Q L+D + S+ L +LR ++V A+DQ+G R +Q+ + + E +F E+
Sbjct: 1023 SRSQLLEDFRNSSARFQHMHLSELRDHMVEFARDQHGSRFIQQKLETATTAEKNSVFNEI 1082
Query: 188 IDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLL 247
+ +LM D FGNYV+QK E ++EQ+ + L +V +G R + K L
Sbjct: 1083 LPHSGKLMTDVFGNYVIQKFFEFGTKEQKELLSQRLQG---HVVEFATQMYGCRVIQKAL 1139
Query: 248 ENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIA 307
E++ +I +V LRP KD NG++VIQ C++ + ++++ ++
Sbjct: 1140 ESVPAEAKIHIV-GELRPFVTRCVKDQNGNHVIQKCIECVPPSELDFIISAFRGQVVLLS 1198
Query: 308 TDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASL 367
+ GC V+Q +E+ Q ++ E+ L +D YGNYV+QH+L + + +
Sbjct: 1199 SHPYGCRVIQRILEHCLPEQTRPILDELHKGVEHLVKDQYGNYVIQHVLEHGSNEDKSRI 1258
Query: 368 LRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL 408
++ L G + S +K+ SNV+E+ + + + +I E+L
Sbjct: 1259 IQNLRGRVCALSSHKFASNVMEKAIANAVPSERAVLIEEIL 1299
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 112/229 (48%), Gaps = 25/229 (10%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L+G++V A YGCR +Q+ + S+P E I E+ V + D GN+V+QK +E
Sbjct: 1118 LQGHVVEFATQMYGCRVIQKALESVPAEAKIHIVGELRPFVTRCVKDQNGNHVIQKCIEC 1177
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ I+ Q+V + + +G R + ++LE+ P+Q +L L G L
Sbjct: 1178 VPPSELDFIISAFRG---QVVLLSSHPYGCRVIQRILEHCL-PEQTRPILDELHKGVEHL 1233
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
KD G+YVIQ+ ++H S+ED ++ + +++ K V++ + + ++R
Sbjct: 1234 VKDQYGNYVIQHVLEHGSNEDKSRIIQNLRGRVCALSSHKFASNVMEKAIANAVPSERAV 1293
Query: 331 LVAEI--------------------IANALL-LAEDCYGNYVVQHLLAL 358
L+ EI I+++L+ + +D Y NYVVQ +L L
Sbjct: 1294 LIEEILHPISNVNINGDTSSVTTNNISSSLVDMMKDQYANYVVQRMLEL 1342
>gi|35186942|gb|AAQ84133.1| pumilio protein 4 [Trypanosoma cruzi]
Length = 976
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 148/281 (52%), Gaps = 11/281 (3%)
Query: 152 RGNIVALAKDQYGCRHLQRTMSSLP--KEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
RG++V +A DQ+GCR LQ + P +E++ + E++ + ++M P+GN++VQKL+E
Sbjct: 502 RGHVVEMASDQHGCRELQSVLERYPYRSQEVQCVVNELLPCLPQVMASPYGNFLVQKLLE 561
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
+ +E R +L + L + ++ HG AV KL+++L + +++ +V AAL+ G +
Sbjct: 562 IAPDEDRLHMLSQHLSGS--LCEVAVSPHGNYAVQKLIDSLRSRREVEVVCAALQRGVLM 619
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
L D NG +V+Q ++ +D ++ + + + DK GCCV+Q C++ + +
Sbjct: 620 LMNDLNGGHVVQKLLQCLP-QDVAFVYDAIVEKTIDFCNDKQGCCVVQKCIDSAPPERLP 678
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLL----ALRVPQITASLLRQLEGHYVSFSCNKYGS 385
+L ++ + L L+ YGNYVV HL+ A+ + + NK+ S
Sbjct: 679 QLQEAVLKHFLPLSMSPYGNYVVAHLIRNCDAMNQRHVVDRAAVCVGPALKMLCTNKFAS 738
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVI 426
NVVE L EE ++ LL+ N + + F N ++
Sbjct: 739 NVVEIILSLCSEEVKVQLCRSLLQGSNEKTVFL--FQNKIL 777
>gi|71419381|ref|XP_811149.1| pumilio/PUF RNA binding protein 4 [Trypanosoma cruzi strain CL
Brener]
gi|70875780|gb|EAN89298.1| pumilio/PUF RNA binding protein 4, putative [Trypanosoma cruzi]
Length = 978
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 149/281 (53%), Gaps = 11/281 (3%)
Query: 152 RGNIVALAKDQYGCRHLQRTMSSLP--KEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
RG++V +A DQ+GCR LQ + P +E++ + E++ + ++M P+GN++VQKL+E
Sbjct: 502 RGHVVEMASDQHGCRELQSVLERYPYRSQEVQCVVNELLPCLPQVMASPYGNFLVQKLLE 561
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
+ +E R +L + L + ++ HG AV KL+++L + +++ +V AAL+ G +
Sbjct: 562 IAPDEDRLHMLSQHLSGS--LCEVAVSPHGNYAVQKLIDSLRSRREVEVVCAALQRGVLM 619
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
L D NG +V+Q ++ +D ++ + + + + DK GCCV+Q C++ + +
Sbjct: 620 LMNDLNGGHVVQKLLQCLP-QDVAFVYDAIVEKTIDLCNDKQGCCVVQKCMDSAPPERLP 678
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLL----ALRVPQITASLLRQLEGHYVSFSCNKYGS 385
+L ++ + L L+ YGNYVV HL+ A+ + + NK+ S
Sbjct: 679 QLQEAVLKHFLPLSMSPYGNYVVAHLIRNCDAMNQRHVVDRAAVCVGPALKMLCTNKFAS 738
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVI 426
NVVE L EE ++ LL+ N + + F N ++
Sbjct: 739 NVVEIILSLCSEEVKVQLCRSLLQGSNEKTVFL--FQNKIL 777
>gi|71748656|ref|XP_823383.1| pumilio RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833051|gb|EAN78555.1| pumillio RNA binding protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 843
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 137/254 (53%), Gaps = 15/254 (5%)
Query: 156 VALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQ 215
V A+DQ G R +QR + S +E++ +F E+ + EL++D FGNYV+QKL+E+ + Q
Sbjct: 432 VEFAQDQEGSRFIQRAVESATHDEVDALFREIFESPLELVVDVFGNYVLQKLLEVGNARQ 491
Query: 216 RTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTN 275
L N+ +V + L T+G R + K +E + P+ + ++L+ LR +D N
Sbjct: 492 LAYAATRLQNN---VVNLTLQTYGCRVIQKCIE-VMPPEGLDIILSELRGNVAKCIQDQN 547
Query: 276 GHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGC----CVLQHCVEYSKGAQRERL 331
G++V+Q CV+ ++++ + +AT GC C++ HC + Q E +
Sbjct: 548 GNHVVQKCVEVIPQR-CGFIVSAFSGRVMELATHAYGCRVIQCIMDHCPD-----QEEAI 601
Query: 332 VAEIIANALLLAEDCYGNYVVQHLLA-LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+E++ LA D YGNYV+QH+L ++ + + L+G++ S K+ SNV+E+
Sbjct: 602 FSELLDCVGTLATDQYGNYVIQHVLQHMKDDEKVGRIFDALKGNFYESSKQKFASNVMEK 661
Query: 391 CLLESGEEQSTRII 404
+ + +Q ++
Sbjct: 662 LFVRADPQQRMELV 675
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 129/294 (43%), Gaps = 25/294 (8%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L+ N+V L YGCR +Q+ + +P E +++I E+ V + + D GN+VVQK VE+
Sbjct: 499 LQNNVVNLTLQTYGCRVIQKCIEVMPPEGLDIILSELRGNVAKCIQDQNGNHVVQKCVEV 558
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ R +++ +++ + + +G R + ++++ P Q + + L TL
Sbjct: 559 IPQ----RCGFIVSAFSGRVMELATHAYGCRVIQCIMDHC--PDQEEAIFSELLDCVGTL 612
Query: 271 TKDTNGHYVIQYCVKHFS-HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
D G+YVIQ+ ++H E + + + N Y + K V++ + QR
Sbjct: 613 ATDQYGNYVIQHVLQHMKDDEKVGRIFDALKGNFYESSKQKFASNVMEKLFVRADPQQRM 672
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVE 389
LV + + G+ + + L + +A +E N+Y
Sbjct: 673 ELVNMMCSP--------IGDDSGEPVEVLSFKRSSAPKKENVEKQR-----NEYAKKGRR 719
Query: 390 RCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYVIQSALLVSKVRLF 438
+ +E S +++E+ R P + LM +PF NYV Q L + V +
Sbjct: 720 DRERDREKENSLGLVVEVQLAGREPPSMLCLMMQNPFANYVAQRVLDAAHVDQY 773
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 5/200 (2%)
Query: 231 VRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHE 290
V + G R + + +E+ T+ ++ + + + L D G+YV+Q ++ +
Sbjct: 432 VEFAQDQEGSRFIQRAVESATH-DEVDALFREIFESPLELVVDVFGNYVLQKLLEVGNAR 490
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
Y + +N + GC V+Q C+E + +++E+ N +D GN+
Sbjct: 491 QLAYAATRLQNNVVNLTLQTYGCRVIQKCIEVMPPEGLDIILSELRGNVAKCIQDQNGNH 550
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
VVQ + + +PQ ++ G + + + YG V++ C+++ +Q I ELL
Sbjct: 551 VVQKCVEV-IPQRCGFIVSAFSGRVMELATHAYGCRVIQ-CIMDHCPDQEEAIFSELLDC 608
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
V L +GNYVIQ L
Sbjct: 609 --VGTLATDQYGNYVIQHVL 626
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 292 TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYV 351
+++ + + ++ A D+ G +Q VE + + + L EI + L L D +GNYV
Sbjct: 420 SQWRIAHILNHAVEFAQDQEGSRFIQRAVESATHDEVDALFREIFESPLELVVDVFGNYV 479
Query: 352 VQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSP 411
+Q LL + + A +L+ + V+ + YG V+++C +E + II+ LR
Sbjct: 480 LQKLLEVGNARQLAYAATRLQNNVVNLTLQTYGCRVIQKC-IEVMPPEGLDIILSELRG- 537
Query: 412 NVSMLLMHPFGNYVIQSALLV 432
NV+ + GN+V+Q + V
Sbjct: 538 NVAKCIQDQNGNHVVQKCVEV 558
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 3/161 (1%)
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
AV +D G IQ V+ +H++ L E+ ++ + D G VLQ +E
Sbjct: 431 AVEFAQDQEGSRFIQRAVESATHDEVDALFREIFESPLELVVDVFGNYVLQKLLEVGNAR 490
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q + N + L YG V+Q + + P+ +L +L G+ ++ G++
Sbjct: 491 QLAYAATRLQNNVVNLTLQTYGCRVIQKCIEVMPPEGLDIILSELRGNVAKCIQDQNGNH 550
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQ 427
VV++C +E ++ I+ S V L H +G VIQ
Sbjct: 551 VVQKC-VEVIPQRCGFIVSAF--SGRVMELATHAYGCRVIQ 588
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 41/144 (28%)
Query: 148 LRDLRGNIVALAKDQ-----------------------------------YGCRHLQRTM 172
L +LRGN+ +DQ YGCR +Q M
Sbjct: 532 LSELRGNVAKCIQDQNGNHVVQKCVEVIPQRCGFIVSAFSGRVMELATHAYGCRVIQCIM 591
Query: 173 SSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE-LCSEEQRTRILLMLTNDDFQLV 231
P +E E IF E++D V L D +GNYV+Q +++ + +E+ RI L + ++
Sbjct: 592 DHCPDQE-EAIFSELLDCVGTLATDQYGNYVIQHVLQHMKDDEKVGRIFDALKGNFYESS 650
Query: 232 RICLNTHGIRAVLKLLENLTNPQQ 255
+ ++ V++ L +PQQ
Sbjct: 651 KQKFASN----VMEKLFVRADPQQ 670
>gi|261333325|emb|CBH16320.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 843
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 137/254 (53%), Gaps = 15/254 (5%)
Query: 156 VALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQ 215
V A+DQ G R +QR + S +E++ +F E+ + EL++D FGNYV+QKL+E+ + Q
Sbjct: 432 VEFAQDQEGSRFIQRAVESATHDEVDALFREIFESPLELVVDVFGNYVLQKLLEVGNARQ 491
Query: 216 RTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTN 275
L N+ +V + L T+G R + K +E + P+ + ++L+ LR +D N
Sbjct: 492 LAYAATRLQNN---VVNLTLQTYGCRVIQKCIE-VMPPEGLDIILSELRGNVAKCIQDQN 547
Query: 276 GHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGC----CVLQHCVEYSKGAQRERL 331
G++V+Q CV+ ++++ + +AT GC C++ HC + Q E +
Sbjct: 548 GNHVVQKCVEVIPQR-CGFIVSAFSGRVMELATHAYGCRVIQCIMDHCPD-----QEEAI 601
Query: 332 VAEIIANALLLAEDCYGNYVVQHLLA-LRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+E++ LA D YGNYV+QH+L ++ + + L+G++ S K+ SNV+E+
Sbjct: 602 FSELLDCVGTLATDQYGNYVIQHVLQHMKDDEKVGRIFDALKGNFYESSKQKFASNVMEK 661
Query: 391 CLLESGEEQSTRII 404
+ + +Q ++
Sbjct: 662 LFVRADPQQRMELV 675
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 129/294 (43%), Gaps = 25/294 (8%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
L+ N+V L YGCR +Q+ + +P E +++I E+ V + + D GN+VVQK VE+
Sbjct: 499 LQNNVVNLTLQTYGCRVIQKCIEVMPPEGLDIILSELRGNVAKCIQDQNGNHVVQKCVEV 558
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
+ R +++ +++ + + +G R + ++++ P Q + + L TL
Sbjct: 559 IPQ----RCGFIVSAFSGRVMELATHAYGCRVIQCIMDHC--PDQEEAIFSELLDCVGTL 612
Query: 271 TKDTNGHYVIQYCVKHFS-HEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
D G+YVIQ+ ++H E + + + N Y + K V++ + QR
Sbjct: 613 ATDQYGNYVIQHVLQHMKDDEKVGRIFDALKGNFYESSKQKFASNVMEKLFVRADPQQRM 672
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVE 389
LV + + G+ + + L + +A +E N+Y
Sbjct: 673 ELVNMMCSP--------IGDDSGEPVEVLSFKRSSAPKKENVEKQR-----NEYAKKGRR 719
Query: 390 RCLLESGEEQSTRIIIELL---RSPNVSMLLM--HPFGNYVIQSALLVSKVRLF 438
+ +E S +++E+ R P + LM +PF NYV Q L + V +
Sbjct: 720 DRERDREKENSLGLVVEVQLAGREPPSMLCLMMQNPFANYVAQRVLDAAHVDQY 773
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 5/200 (2%)
Query: 231 VRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHE 290
V + G R + + +E+ T+ ++ + + + L D G+YV+Q ++ +
Sbjct: 432 VEFAQDQEGSRFIQRAVESATH-DEVDALFREIFESPLELVVDVFGNYVLQKLLEVGNAR 490
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
Y + +N + GC V+Q C+E + +++E+ N +D GN+
Sbjct: 491 QLAYAATRLQNNVVNLTLQTYGCRVIQKCIEVMPPEGLDIILSELRGNVAKCIQDQNGNH 550
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
VVQ + + +PQ ++ G + + + YG V++ C+++ +Q I ELL
Sbjct: 551 VVQKCVEV-IPQRCGFIVSAFSGRVMELATHAYGCRVIQ-CIMDHCPDQEEAIFSELLDC 608
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
V L +GNYVIQ L
Sbjct: 609 --VGTLATDQYGNYVIQHVL 626
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 292 TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYV 351
+++ + + ++ A D+ G +Q VE + + + L EI + L L D +GNYV
Sbjct: 420 SQWRIAHILNHAVEFAQDQEGSRFIQRAVESATHDEVDALFREIFESPLELVVDVFGNYV 479
Query: 352 VQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSP 411
+Q LL + + A +L+ + V+ + YG V+++C +E + II+ LR
Sbjct: 480 LQKLLEVGNARQLAYAATRLQNNVVNLTLQTYGCRVIQKC-IEVMPPEGLDIILSELRG- 537
Query: 412 NVSMLLMHPFGNYVIQSALLV 432
NV+ + GN+V+Q + V
Sbjct: 538 NVAKCIQDQNGNHVVQKCVEV 558
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 3/161 (1%)
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
AV +D G IQ V+ +H++ L E+ ++ + D G VLQ +E
Sbjct: 431 AVEFAQDQEGSRFIQRAVESATHDEVDALFREIFESPLELVVDVFGNYVLQKLLEVGNAR 490
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q + N + L YG V+Q + + P+ +L +L G+ ++ G++
Sbjct: 491 QLAYAATRLQNNVVNLTLQTYGCRVIQKCIEVMPPEGLDIILSELRGNVAKCIQDQNGNH 550
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQ 427
VV++C +E ++ I+ S V L H +G VIQ
Sbjct: 551 VVQKC-VEVIPQRCGFIVSAF--SGRVMELATHAYGCRVIQ 588
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 41/144 (28%)
Query: 148 LRDLRGNIVALAKDQ-----------------------------------YGCRHLQRTM 172
L +LRGN+ +DQ YGCR +Q M
Sbjct: 532 LSELRGNVAKCIQDQNGNHVVQKCVEVIPQRCGFIVSAFSGRVMELATHAYGCRVIQCIM 591
Query: 173 SSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE-LCSEEQRTRILLMLTNDDFQLV 231
P +E E IF E++D V L D +GNYV+Q +++ + +E+ RI L + ++
Sbjct: 592 DHCPDQE-EAIFSELLDCVGTLATDQYGNYVIQHVLQHMKDDEKVGRIFDALKGNFYESS 650
Query: 232 RICLNTHGIRAVLKLLENLTNPQQ 255
+ ++ V++ L +PQQ
Sbjct: 651 KQKFASN----VMEKLFVRADPQQ 670
>gi|363755128|ref|XP_003647779.1| hypothetical protein Ecym_7110 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891815|gb|AET40962.1| hypothetical protein Ecym_7110 [Eremothecium cymbalariae
DBVPG#7215]
Length = 881
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 153/306 (50%), Gaps = 25/306 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G+ + KDQ+G R +Q+ +++ E E+IF E+ D +L D FGNYV+QK
Sbjct: 536 LHEIYGSALEFCKDQHGSRFIQQELATASAIEKEIIFNEIRDHAIQLSHDVFGNYVIQKF 595
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ +++ +L + L + R + + E + Q+I LV+ L
Sbjct: 596 FEFGTKTQKD---ILVEQFKGKLEMLSLEMYACRVIQRAFEFIDEDQKIELVME-LSASV 651
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+T+ KD NG++VIQ ++ ++L + Y ++T GC V+Q +EY
Sbjct: 652 LTMIKDQNGNHVIQKTIECIPMSKLPFILESLKGQIYHLSTHFYGCRVVQRLLEYGSKED 711
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLL--------ALRVPQITASLLRQLEGHYVSFS 379
++ ++ E+ L +D YGNYV+QH+L A + + ++ + V FS
Sbjct: 712 QDEILNELDQFIPYLVQDQYGNYVIQHILQHGGDDPAANHIDKSKQDIVNTISKTVVDFS 771
Query: 380 CNKYGSNVVERCLLESGEEQSTRIIIELL------------RSPNVSMLLMHPFGNYVIQ 427
+K+ SNVVE+ +L Q +++ ++L SP + +++ + NYV+Q
Sbjct: 772 KHKFASNVVEKTILYGSVSQKRQVLDKILPNDEGHAANLEDSSPLI-LMMRDQYANYVVQ 830
Query: 428 SALLVS 433
+ V+
Sbjct: 831 KLVGVA 836
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 2/137 (1%)
Query: 294 YLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQ 353
Y L+E+ + D+ G +Q + + ++E + EI +A+ L+ D +GNYV+Q
Sbjct: 534 YKLHEIYGSALEFCKDQHGSRFIQQELATASAIEKEIIFNEIRDHAIQLSHDVFGNYVIQ 593
Query: 354 HLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNV 413
L+ Q +G S Y V++R E+Q +++EL S +V
Sbjct: 594 KFFEFGTKTQKDILVEQFKGKLEMLSLEMYACRVIQRAFEFIDEDQKIELVMEL--SASV 651
Query: 414 SMLLMHPFGNYVIQSAL 430
++ GN+VIQ +
Sbjct: 652 LTMIKDQNGNHVIQKTI 668
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 88/222 (39%), Gaps = 39/222 (17%)
Query: 246 LLENL-TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNC- 303
LLE TNP + L + A+ KD +G IQ + S + + + NE+ D+
Sbjct: 521 LLEEFRTNPTNKNYKLHEIYGSALEFCKDQHGSRFIQQELATASAIEKEIIFNEIRDHAI 580
Query: 304 -----------------YGIATDKS------------------GCCVLQHCVEYSKGAQR 328
+G T K C V+Q E+ Q+
Sbjct: 581 QLSHDVFGNYVIQKFFEFGTKTQKDILVEQFKGKLEMLSLEMYACRVIQRAFEFIDEDQK 640
Query: 329 ERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
LV E+ A+ L + +D GN+V+Q + +L L+G S + YG VV
Sbjct: 641 IELVMELSASVLTMIKDQNGNHVIQKTIECIPMSKLPFILESLKGQIYHLSTHFYGCRVV 700
Query: 389 ERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+R L +E I+ EL + + L+ +GNYVIQ L
Sbjct: 701 QRLLEYGSKEDQDEILNELDQF--IPYLVQDQYGNYVIQHIL 740
>gi|145547968|ref|XP_001459665.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427491|emb|CAK92268.1| unnamed protein product [Paramecium tetraurelia]
Length = 640
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 158/301 (52%), Gaps = 16/301 (5%)
Query: 136 NQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELM 195
++W +D S +RG IV AK Q+G R +Q+ ++ + E++ + E+ + +LM
Sbjct: 311 DEWTED---LQSFEQIRGKIVNFAKTQHGSRLIQKHFTTCTQIELDQLLQEIGSNIGDLM 367
Query: 196 IDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ 255
IDP+ NY+ L + C+ QR IL ++N +LV I + G A+ L+ +++ Q+
Sbjct: 368 IDPYANYMFGSLSQSCAPHQRLYILQTISN---RLVDIACDKKGTHAIQSLVSLISSKQE 424
Query: 256 ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCV 315
+V +++ + LT D+ G ++I+ + FS + + +++ + + + G CV
Sbjct: 425 EEMVENSIKNHIINLTLDSQGTHLIKKIIARFSEDRLNLIFSKLMEKFIQVVNHQFGLCV 484
Query: 316 LQHCV-EYSKGAQRERLVAEIIANAL-LLAEDCYGNYVVQHLL----ALRVPQITASLLR 369
L+ + ++ ++ + + + L + +D +GNY VQH + L+ I +L+
Sbjct: 485 LKDLITKFKNNPEKCTFILIKMRDQLDDIVQDPFGNYGVQHAIDVYGDLKCTPIIDKILQ 544
Query: 370 QLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSA 429
+L V S +KY SNVVE+C+LE+ + R I +L + L+ + FG +V+Q A
Sbjct: 545 KL----VQLSIHKYSSNVVEKCILETSAKTQKRFIKQLSQDVICLELMKNKFGTFVLQKA 600
Query: 430 L 430
L
Sbjct: 601 L 601
>gi|429961553|gb|ELA41098.1| hypothetical protein VICG_01891 [Vittaforma corneae ATCC 50505]
Length = 467
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 148/299 (49%), Gaps = 20/299 (6%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
S DL + + KDQ G R++Q M + ++I + F ++D EL ++ FGNYV+QK
Sbjct: 152 SSTDLSDICITVCKDQEGSRYIQGLMDTWNADQISLFFDRIVDSSFELSMNLFGNYVIQK 211
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
++ L +E Q ++L ++L L+ +G R V KL++NL + + V+A L
Sbjct: 212 IIPLLNESQIFSLILQFFGHIYEL---SLHVYGCRVVQKLIDNL---RDVKSVVAELESH 265
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
L + NG++VIQ C+ D ++LL E N G+A + GC VLQ E
Sbjct: 266 IPELIESPNGNHVIQRCID--KDIDKRFLLKEFEKNGVGLAQQRYGCRVLQRLFEVCSEE 323
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLA---LRVPQITASLLRQLEGHYVSFSCNKY 383
+ + +II N +L D YGNYV+QH + QI + +++ + S +K+
Sbjct: 324 ETWSIYLQIIKNIDILINDKYGNYVIQHFIESSNKHKDQIFSFIIK----NSFDLSKDKF 379
Query: 384 GSNVVERCLLESGEEQSTRIIIELLR-----SPNVSMLLMHPFGNYVIQSALLVSKVRL 437
SN VE+C+ +EQ + E + P + + + + NYV+Q V+ L
Sbjct: 380 SSNAVEKCVNNCSKEQLESLFKEFSKVHENSRPCLYYMCIDMYANYVVQRFFDVADEEL 438
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 114/247 (46%), Gaps = 20/247 (8%)
Query: 153 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCS 212
G+I L+ YGCR +Q+ + +L +++ + E+ + EL+ P GN+V+Q+ ++
Sbjct: 230 GHIYELSLHVYGCRVVQKLIDNL--RDVKSVVAELESHIPELIESPNGNHVIQRCID--- 284
Query: 213 EEQRTRILLMLTNDDFQL--VRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
++ R LL +F+ V + +G R + +L E + + S+ L ++ + L
Sbjct: 285 KDIDKRFLL----KEFEKNGVGLAQQRYGCRVLQRLFEVCSEEETWSIYLQIIKNIDI-L 339
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
D G+YVIQ+ ++ S++ + + + N + ++ DK ++ CV Q E
Sbjct: 340 INDKYGNYVIQHFIES-SNKHKDQIFSFIIKNSFDLSKDKFSSNAVEKCVNNCSKEQLES 398
Query: 331 LVAE---IIANA----LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
L E + N+ + D Y NYVVQ + ++ ++ + C +
Sbjct: 399 LFKEFSKVHENSRPCLYYMCIDMYANYVVQRFFDVADEELRTKAKALVKPYIKDMKCIPF 458
Query: 384 GSNVVER 390
+++ R
Sbjct: 459 TKHILSR 465
>gi|301122711|ref|XP_002909082.1| pumilio-like mating protein M90 [Phytophthora infestans T30-4]
gi|262099844|gb|EEY57896.1| pumilio-like mating protein M90 [Phytophthora infestans T30-4]
Length = 926
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 153/306 (50%), Gaps = 27/306 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++G++ AKDQ G R +Q+ + + F E+ LM D FGNYV+QK
Sbjct: 581 LSAIKGHLFLFAKDQTGSRFIQQKLEKADERVKADAFNEIFPNSLLLMTDVFGNYVIQKF 640
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
+E S EQ+ ++ ++T++ ++ + L +G R + + LE +Q++L+ L+
Sbjct: 641 LEYGSLEQQQLLVELMTSN---MISLALQVYGCRVIQRALEVTQVEEQLALIRQ-LKGHV 696
Query: 268 VTLTKDTNGHYVIQYCVKHFS-----------------HEDTKYLLNEVADNCYGIATDK 310
+ D NG++V+Q C++ S ED +++++ ++T
Sbjct: 697 MKCVTDQNGNHVLQKCIEAASWKRAAECKGLRPQRFVTGEDIQFIIDSFVGQAASLSTHS 756
Query: 311 SGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQ 370
GC V+Q +E+ Q L+ EII L +D +GNYVVQH+++ P +++
Sbjct: 757 YGCRVIQRVLEHCAPNQIRPLLDEIIYKCRDLVKDQFGNYVVQHVISHGEPDQRNIVMQA 816
Query: 371 LEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSM------LLMHPFGNY 424
+ +S +KY SNVVE CL + +E+ ++I+ +L+ ++ H +GNY
Sbjct: 817 VLPEIARWSQHKYASNVVESCLEHATKEEISQIVDFILQCDESGASCALLPMMKHMYGNY 876
Query: 425 VIQSAL 430
V+Q L
Sbjct: 877 VVQKLL 882
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
K+ L+ + + + A D++G +Q +E + + EI N+LLL D +GNYV+
Sbjct: 578 KWGLSAIKGHLFLFAKDQTGSRFIQQKLEKADERVKADAFNEIFPNSLLLMTDVFGNYVI 637
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q L + L+ + + +S + YG V++R L + E+ +I +L +
Sbjct: 638 QKFLEYGSLEQQQLLVELMTSNMISLALQVYGCRVIQRALEVTQVEEQLALIRQL--KGH 695
Query: 413 VSMLLMHPFGNYVIQSAL 430
V + GN+V+Q +
Sbjct: 696 VMKCVTDQNGNHVLQKCI 713
>gi|23505401|gb|AAN37689.1| pumilio-like mating protein M90 [Phytophthora infestans]
Length = 875
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 153/307 (49%), Gaps = 27/307 (8%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
L ++G++ AKDQ G R +Q+ + + F E+ LM D FGNYV+QK
Sbjct: 529 GLSAIKGHLFLFAKDQTGSRFIQQKLEKADERVKADAFNEIFPNSLLLMTDVFGNYVIQK 588
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
+E S EQ+ ++ ++T++ ++ + L +G R + + LE +Q++L+ L+
Sbjct: 589 FLEYGSLEQQQLLVELMTSN---MISLALQVYGCRVIQRALEVTQVEEQLALIRQ-LKGH 644
Query: 267 AVTLTKDTNGHYVIQYCVKHFS-----------------HEDTKYLLNEVADNCYGIATD 309
+ D NG++V+Q C++ S ED +++++ ++T
Sbjct: 645 VMKCVTDQNGNHVLQKCIEAASWKRAAECKGLRPQRFVTGEDIQFIIDSFVGQAASLSTH 704
Query: 310 KSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLR 369
GC V+Q +E+ Q L+ EII L +D +GNYVVQH+++ P +++
Sbjct: 705 SYGCRVIQRVLEHCAPNQIRPLLDEIIYKCRDLVKDQFGNYVVQHVISHGEPDQRNIVMQ 764
Query: 370 QLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSM------LLMHPFGN 423
+ +S +KY SNVVE CL + +E+ ++I+ +L+ ++ H +GN
Sbjct: 765 AVLPEIARWSQHKYASNVVESCLEHATKEEISQIVDFILQCDESGASCALLPMMKHMYGN 824
Query: 424 YVIQSAL 430
YV+Q L
Sbjct: 825 YVVQKLL 831
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
K+ L+ + + + A D++G +Q +E + + EI N+LLL D +GNYV+
Sbjct: 527 KWGLSAIKGHLFLFAKDQTGSRFIQQKLEKADERVKADAFNEIFPNSLLLMTDVFGNYVI 586
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q L + L+ + + +S + YG V++R L + E+ +I +L +
Sbjct: 587 QKFLEYGSLEQQQLLVELMTSNMISLALQVYGCRVIQRALEVTQVEEQLALIRQL--KGH 644
Query: 413 VSMLLMHPFGNYVIQSAL 430
V + GN+V+Q +
Sbjct: 645 VMKCVTDQNGNHVLQKCI 662
>gi|407844575|gb|EKG02024.1| pumilio/PUF RNA binding protein 4, putative [Trypanosoma cruzi]
Length = 973
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 141/267 (52%), Gaps = 9/267 (3%)
Query: 152 RGNIVALAKDQYGCRHLQRTMSSLP--KEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
RG++V +A DQ+GCR LQ + P +E++ + E++ + + M P+GN++VQKL+E
Sbjct: 500 RGHVVEMASDQHGCRELQSVLERYPYHSQEVQCVVNELLPCLPQAMASPYGNFLVQKLLE 559
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
+ +E R +L + L + ++ HG AV KL+E+L + +++ +V AAL+ G +
Sbjct: 560 ISPDEDRLHMLSQHLSGS--LCEVAVSPHGNYAVQKLIESLRSRREVEVVCAALQRGVLM 617
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
L D NG +V+Q ++ +D ++ + + + DK GCCV+Q C++ + +
Sbjct: 618 LMNDLNGGHVVQKLLQCLP-QDVAFVYDAIVEKTIDFCNDKQGCCVVQKCMDSAPPERLP 676
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLL----ALRVPQITASLLRQLEGHYVSFSCNKYGS 385
+L ++ + L L+ YGNYVV HL+ A+ + + NK+ S
Sbjct: 677 QLQEAVLKHFLPLSMSPYGNYVVAHLIRNCDAMNQRHVVDRAAVCVGPALKMLCTNKFAS 736
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPN 412
NVVE L EE ++ +L+ N
Sbjct: 737 NVVEIILSLCSEEAKVQLCRSILQGSN 763
>gi|167382459|ref|XP_001736113.1| pumilio domain-containing protein C6G9.14 [Entamoeba dispar SAW760]
gi|165901552|gb|EDR27630.1| pumilio domain-containing protein C6G9.14, putative [Entamoeba
dispar SAW760]
Length = 435
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 146/282 (51%), Gaps = 5/282 (1%)
Query: 151 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+G + K GC LQ+ + KE + +IF E+ D + EL+ P G Y++ K+VE
Sbjct: 122 FQGQFYQMTKYASGCSLLQKLLDGASKESVFLIFKEIEDSLEELITHPNGQYILPKIVEF 181
Query: 211 CSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTL 270
SEE + + +++ + LV+ C + G V K+ + I + LR L
Sbjct: 182 GSEEIKDNVFGVVSEN---LVKYCCHQFGGYTVQKIAP-FMRERHIQIWSPILRNNIAIL 237
Query: 271 TKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRER 330
D + +YVIQ +K F+ +++ + + D I+ K GC VL H ++ S Q
Sbjct: 238 IIDPHANYVIQTLLKIFNEKNSDFFYRGLKDCVVDISKTKIGCSVLTHAMDNSTNQQINS 297
Query: 331 LVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
+ ++++N L +D YGN+++QHL+ P I + ++ +++ + V +S K+ SNVVE+
Sbjct: 298 IKPQLLSNCCDLIQDQYGNFIIQHLME-NDPTIISDIIHKIKDNIVFYSKQKFSSNVVEK 356
Query: 391 CLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLV 432
CL S E ++ L + ++ L+ +GN+VIQ+ L V
Sbjct: 357 CLKCSTENVRQPLLDVLSQPESLVALVEDQYGNFVIQAFLDV 398
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 89/183 (48%), Gaps = 18/183 (9%)
Query: 253 PQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSG 312
PQ++ ++ + ++ L+ + N + + K ++++ Y + SG
Sbjct: 86 PQELEKIVKSFSLPSIKLSTNINPN----------KKAEQKVIVSKFQGQFYQMTKYASG 135
Query: 313 CCVLQHCVEYSKGAQRER--LVAEIIANALL-LAEDCYGNYVVQHLLALRVPQITASLLR 369
C +LQ ++ GA +E L+ + I ++L L G Y++ ++ +I ++
Sbjct: 136 CSLLQKLLD---GASKESVFLIFKEIEDSLEELITHPNGQYILPKIVEFGSEEIKDNVFG 192
Query: 370 QLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSA 429
+ + V + C+++G V++ + E+ +I +LR+ N+++L++ P NYVIQ+
Sbjct: 193 VVSENLVKYCCHQFGGYTVQK-IAPFMRERHIQIWSPILRN-NIAILIIDPHANYVIQTL 250
Query: 430 LLV 432
L +
Sbjct: 251 LKI 253
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 70/143 (48%), Gaps = 23/143 (16%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
R L+ +V ++K + GC L M + ++I I +++ C+L+ D +GN+++Q L+
Sbjct: 264 RGLKDCVVDISKTKIGCSVLTHAMDNSTNQQINSIKPQLLSNCCDLIQDQYGNFIIQHLM 323
Query: 209 E----LCSE--EQRTRILLMLTNDDFQ--LVRICL--NTHGIRAVLKLLENLTNPQQISL 258
E + S+ + ++ + F +V CL +T +R LL+ L+ P+ +
Sbjct: 324 ENDPTIISDIIHKIKDNIVFYSKQKFSSNVVEKCLKCSTENVRQ--PLLDVLSQPESL-- 379
Query: 259 VLAALRPGAVTLTKDTNGHYVIQ 281
V L +D G++VIQ
Sbjct: 380 ---------VALVEDQYGNFVIQ 393
>gi|45184672|ref|NP_982390.1| AAL152Wp [Ashbya gossypii ATCC 10895]
gi|44980018|gb|AAS50214.1| AAL152Wp [Ashbya gossypii ATCC 10895]
gi|374105588|gb|AEY94499.1| FAAL152Wp [Ashbya gossypii FDAG1]
Length = 787
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 151/306 (49%), Gaps = 25/306 (8%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L ++ G+ + KDQ+G R +Q+ +++ E E+IF E+ D +L D FGNYV+QK
Sbjct: 442 LHEIYGSALEFCKDQHGSRFIQQELATASNIEKEVIFNEIRDHAIQLSHDVFGNYVIQKF 501
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E ++ Q+ ++ +L + L + R + + E + Q+I LV+ L
Sbjct: 502 FEFGTKTQKDILVEQFRG---KLEALSLEMYACRVIQRAFEFIDEDQKIDLVME-LSSSV 557
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+T+ KD NG++VIQ ++ ++L + Y ++T GC V+Q +EY A
Sbjct: 558 LTMIKDQNGNHVIQKTIECIPMSKLPFILESLRGQIYHLSTHFYGCRVVQRLLEYGSKAD 617
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLAL--------RVPQITASLLRQLEGHYVSFS 379
+E ++ E+ L +D YGNYV+QH+L + + ++ + V FS
Sbjct: 618 QEEILNELDQFIPYLVQDQYGNYVIQHILQHGGDNPAENHIDKSKQDIVDTISKTVVEFS 677
Query: 380 CNKYGSNVVERCLLESGEEQSTRIIIELL------------RSPNVSMLLMHPFGNYVIQ 427
+K+ SNVVE+ +L Q +++ ++L SP + +++ + NYV+Q
Sbjct: 678 KHKFASNVVEKTILYGSASQKRQVLDKILPKDEEHAATLEDTSPLI-LMMRDQYANYVVQ 736
Query: 428 SALLVS 433
+ V
Sbjct: 737 KLVGVG 742
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 2/137 (1%)
Query: 294 YLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQ 353
Y L+E+ + D+ G +Q + + ++E + EI +A+ L+ D +GNYV+Q
Sbjct: 440 YKLHEIYGSALEFCKDQHGSRFIQQELATASNIEKEVIFNEIRDHAIQLSHDVFGNYVIQ 499
Query: 354 HLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNV 413
L+ Q G + S Y V++R E+Q +++EL S +V
Sbjct: 500 KFFEFGTKTQKDILVEQFRGKLEALSLEMYACRVIQRAFEFIDEDQKIDLVMEL--SSSV 557
Query: 414 SMLLMHPFGNYVIQSAL 430
++ GN+VIQ +
Sbjct: 558 LTMIKDQNGNHVIQKTI 574
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 88/222 (39%), Gaps = 39/222 (17%)
Query: 246 LLENL-TNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNC- 303
LLE TNP + L + A+ KD +G IQ + S+ + + + NE+ D+
Sbjct: 427 LLEEFRTNPTNKTYKLHEIYGSALEFCKDQHGSRFIQQELATASNIEKEVIFNEIRDHAI 486
Query: 304 -----------------YGIATDKS------------------GCCVLQHCVEYSKGAQR 328
+G T K C V+Q E+ Q+
Sbjct: 487 QLSHDVFGNYVIQKFFEFGTKTQKDILVEQFRGKLEALSLEMYACRVIQRAFEFIDEDQK 546
Query: 329 ERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVV 388
LV E+ ++ L + +D GN+V+Q + +L L G S + YG VV
Sbjct: 547 IDLVMELSSSVLTMIKDQNGNHVIQKTIECIPMSKLPFILESLRGQIYHLSTHFYGCRVV 606
Query: 389 ERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
+R LLE G + I+ L + L+ +GNYVIQ L
Sbjct: 607 QR-LLEYGSKADQEEILNELDQ-FIPYLVQDQYGNYVIQHIL 646
>gi|312374345|gb|EFR21918.1| hypothetical protein AND_16037 [Anopheles darlingi]
Length = 1034
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 148/284 (52%), Gaps = 21/284 (7%)
Query: 143 FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNY 202
F LRDL +IV ++DQ+G R +Q+ + E +++F E++ LM D FGNY
Sbjct: 614 FPNLQLRDLTNHIVEFSQDQHGSRFIQQKLERATGPEKQLVFNEILGAAYNLMTDVFGNY 673
Query: 203 VVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAA 262
V+QK E S EQ+ + + ++ + L +G R + K LE++ P+Q ++
Sbjct: 674 VIQKFFEFGSPEQKQALAQQVKG---HVLPLALQMYGCRVIQKALESIP-PEQQQEIVRE 729
Query: 263 LRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEY 322
L + KD NG++V+Q C++ +++++ + Y ++T GC V+Q +E+
Sbjct: 730 LDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIIDAFRNQVYSLSTHPYGCRVIQRILEH 789
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNK 382
Q ++AE+ AN L +D YGNYV+QH+L G +V ++
Sbjct: 790 CTPEQTAPILAELHANTEQLIQDQYGNYVIQHVLG--------------TGLHVMMK-DQ 834
Query: 383 YGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVI 426
Y + VV++ +++ E ++++ +R P+++ L + +G ++I
Sbjct: 835 YANYVVQK-MIDVSEPTQRKVLLHKIR-PHMNSLKKYTYGKHII 876
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 99/225 (44%), Gaps = 13/225 (5%)
Query: 216 RTRILLMLTNDDF----------QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
R+R+L N F +V + HG R + + LE T P++ LV +
Sbjct: 602 RSRLLEDFRNQRFPNLQLRDLTNHIVEFSQDQHGSRFIQQKLERATGPEK-QLVFNEILG 660
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
A L D G+YVIQ + S E + L +V + +A GC V+Q +E
Sbjct: 661 AAYNLMTDVFGNYVIQKFFEFGSPEQKQALAQQVKGHVLPLALQMYGCRVIQKALESIPP 720
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGS 385
Q++ +V E+ + L +D GN+VVQ + P ++ S S + YG
Sbjct: 721 EQQQEIVRELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIIDAFRNQVYSLSTHPYGC 780
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
V++R L EQ+ I+ EL N L+ +GNYVIQ L
Sbjct: 781 RVIQRILEHCTPEQTAPILAEL--HANTEQLIQDQYGNYVIQHVL 823
>gi|254586475|ref|XP_002498805.1| ZYRO0G18964p [Zygosaccharomyces rouxii]
gi|238941699|emb|CAR29872.1| ZYRO0G18964p [Zygosaccharomyces rouxii]
Length = 830
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 157/313 (50%), Gaps = 39/313 (12%)
Query: 156 VALAKDQYGCRHLQRTMSSLPKEEI--EMIFVEVIDRVCELMIDPFGNYVVQKLVELCSE 213
V LA DQ+GCR LQ+ + S + + ++++ ++ +L++D FGNY+VQKL E +
Sbjct: 162 VKLATDQFGCRFLQKKLESPAESNLVRDLMYEQIKGCFLDLILDSFGNYLVQKLCEYLTL 221
Query: 214 EQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR------PGA 267
+Q+T ++ ++ FQ I +N +G R++ K+++ + N QI L+
Sbjct: 222 DQKTFLIQVIYPHVFQ---ISINQYGTRSLQKIIDTVDNESQIDLITKGFSQEHTSIEQV 278
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVAD--NCYGIATDKSGCCVLQHCVEYSKG 325
VTL D NG++VIQ C+ F ++++ + + N I+T K GCCVLQ +
Sbjct: 279 VTLINDLNGNHVIQKCIFKFPPSKFDFIIDAIVEHNNIITISTHKHGCCVLQKLLSVCTL 338
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ--ITASLLRQLEGHYVSFSCNKY 383
Q ++ +I+ L D +GNY++Q LL ++ + A + +L SC K+
Sbjct: 339 QQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAEIFNRLSNELCQLSCLKF 398
Query: 384 GSNVVER-------CLLESGEEQSTRIIIEL-----------------LRSPNVSMLLMH 419
SNVVE+ ++ES + ++ E + + N+++L+
Sbjct: 399 SSNVVEKFIKKLFGIVMESVPKAQENLVPEPNDDVVTAAMGILLTIIDIFTVNLNVLIRD 458
Query: 420 PFGNYVIQSALLV 432
FGNY +Q+ L V
Sbjct: 459 NFGNYALQTLLDV 471
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 105/226 (46%), Gaps = 18/226 (7%)
Query: 226 DDFQLVRICLNTHGIRAVLKLLENLTNPQQI-SLVLAALRPGAVTLTKDTNGHYVIQYCV 284
++ V++ + G R + K LE+ + L+ ++ + L D+ G+Y++Q
Sbjct: 157 EELDYVKLATDQFGCRFLQKKLESPAESNLVRDLMYEQIKGCFLDLILDSFGNYLVQKLC 216
Query: 285 KHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVE----------YSKGAQRERLVAE 334
++ + + +L+ + + + I+ ++ G LQ ++ +KG +E E
Sbjct: 217 EYLTLDQKTFLIQVIYPHVFQISINQYGTRSLQKIIDTVDNESQIDLITKGFSQEHTSIE 276
Query: 335 IIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGH--YVSFSCNKYGSNVVERCL 392
+ + L D GN+V+Q + P ++ + H ++ S +K+G V+++ L
Sbjct: 277 QV---VTLINDLNGNHVIQKCIFKFPPSKFDFIIDAIVEHNNIITISTHKHGCCVLQKLL 333
Query: 393 LESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLVSKVRLF 438
+Q +I +++++ + L+ FGNY+IQ L + ++ +
Sbjct: 334 SVCTLQQIFKISVKIVQF--LPGLINDQFGNYIIQFLLDIKELDFY 377
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 108/242 (44%), Gaps = 41/242 (16%)
Query: 155 IVALAKDQYGCRHLQRTMSSLPKE-EIEMI---FVE---VIDRVCELMIDPFGNYVVQKL 207
+ ++ +QYG R LQ+ + ++ E +I++I F + I++V L+ D GN+V+QK
Sbjct: 235 VFQISINQYGTRSLQKIIDTVDNESQIDLITKGFSQEHTSIEQVVTLINDLNGNHVIQKC 294
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQ--QISLVLAALRP 265
+ + I+ + + ++ I + HG + KLL T Q +IS+ + P
Sbjct: 295 IFKFPPSKFDFIIDAIVEHN-NIITISTHKHGCCVLQKLLSVCTLQQIFKISVKIVQFLP 353
Query: 266 GAVTLTKDTNGHYVIQYC--VKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYS 323
G L D G+Y+IQ+ +K + N +++ ++ K V++ ++
Sbjct: 354 G---LINDQFGNYIIQFLLDIKELDFYLLAEIFNRLSNELCQLSCLKFSSNVVEKFIKKL 410
Query: 324 KG-------AQRERLVAE----IIANAL---------------LLAEDCYGNYVVQHLLA 357
G +E LV E ++ A+ +L D +GNY +Q LL
Sbjct: 411 FGIVMESVPKAQENLVPEPNDDVVTAAMGILLTIIDIFTVNLNVLIRDNFGNYALQTLLD 470
Query: 358 LR 359
++
Sbjct: 471 VK 472
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%)
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
NI+ ++ ++GC LQ+ +S ++I I V+++ + L+ D FGNY++Q L+++
Sbjct: 315 NIITISTHKHGCCVLQKLLSVCTLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDI 371
>gi|410077699|ref|XP_003956431.1| hypothetical protein KAFR_0C03030 [Kazachstania africana CBS 2517]
gi|372463015|emb|CCF57296.1| hypothetical protein KAFR_0C03030 [Kazachstania africana CBS 2517]
Length = 703
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 161/329 (48%), Gaps = 47/329 (14%)
Query: 156 VALAKDQYGCRHLQRTMSSLPKEEI----EMIFVEVIDRVCELMIDPFGNYVVQKLVELC 211
+ LA DQ+GCR LQ+ + S E ++++ ++ L++DPFGNY++QKL E
Sbjct: 133 IKLATDQFGCRFLQKKLESNSITESNLVRDLMYEQIKPFFLNLVLDPFGNYLIQKLCEYL 192
Query: 212 SEEQRTRILLMLTNDDF-QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR------ 264
+ +++T L N + + RI +N +G R++ K+++ + N QI L++
Sbjct: 193 TTDEKT----FLINSIYPHVFRISINQYGTRSLQKIIDTVDNETQIDLIVKGFSQEFTSI 248
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEV--ADNCYGIATDKSGCCVLQHCVEY 322
VTL D NG++VIQ C+ F +++N + +N I+T K GCCVLQ +
Sbjct: 249 DQVVTLINDLNGNHVIQKCIFKFPSSKFDFIINAIIEKNNIIAISTHKHGCCVLQKLLSV 308
Query: 323 SKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALR------VPQITASLLRQLEGHYV 376
Q ++ +II L D +GNY++Q LL ++ + +I +LL
Sbjct: 309 CTLQQIFKISLKIIQFLSGLMNDQFGNYIIQFLLDIKELDFYFLIEIFNTLLV---NDIC 365
Query: 377 SFSCNKYGSNVVERCLLE---------SGE----------EQSTRIIIELLR--SPNVSM 415
SC K+ SNV+E+ + + +G RII+ ++ + N+++
Sbjct: 366 QLSCLKFSSNVIEKYIKKLFRIIQDTINGNILPNMNDDIINNLMRIILNIIEFFTINLNI 425
Query: 416 LLMHPFGNYVIQSALLVSKVRLFSSPPIS 444
L+ +GNY +Q+ L V L P S
Sbjct: 426 LIRDNYGNYALQTLLDVKNYSLLLEYPQS 454
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 39/59 (66%)
Query: 152 RGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL 210
+ NI+A++ ++GC LQ+ +S ++I I +++I + LM D FGNY++Q L+++
Sbjct: 286 KNNIIAISTHKHGCCVLQKLLSVCTLQQIFKISLKIIQFLSGLMNDQFGNYIIQFLLDI 344
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 102/242 (42%), Gaps = 43/242 (17%)
Query: 155 IVALAKDQYGCRHLQRTMSSLPKE-EIEMIF------VEVIDRVCELMIDPFGNYVVQKL 207
+ ++ +QYG R LQ+ + ++ E +I++I ID+V L+ D GN+V+QK
Sbjct: 208 VFRISINQYGTRSLQKIIDTVDNETQIDLIVKGFSQEFTSIDQVVTLINDLNGNHVIQKC 267
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQ--QISLVLAALRP 265
+ + I+ + + ++ I + HG + KLL T Q +ISL +
Sbjct: 268 IFKFPSSKFDFIINAIIEKN-NIIAISTHKHGCCVLQKLLSVCTLQQIFKISLKIIQFLS 326
Query: 266 GAVTLTKDTNGHYVIQYCVK------HFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHC 319
G L D G+Y+IQ+ + +F E LL V D C S + ++
Sbjct: 327 G---LMNDQFGNYIIQFLLDIKELDFYFLIEIFNTLL--VNDICQLSCLKFSSNVIEKYI 381
Query: 320 VEYSKGAQRE------------------RLVAEII----ANALLLAEDCYGNYVVQHLLA 357
+ + Q R++ II N +L D YGNY +Q LL
Sbjct: 382 KKLFRIIQDTINGNILPNMNDDIINNLMRIILNIIEFFTINLNILIRDNYGNYALQTLLD 441
Query: 358 LR 359
++
Sbjct: 442 VK 443
>gi|403216685|emb|CCK71181.1| hypothetical protein KNAG_0G01230 [Kazachstania naganishii CBS
8797]
Length = 798
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 161/329 (48%), Gaps = 42/329 (12%)
Query: 145 CSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEI----EMIFVEVIDRVCELMIDPFG 200
+ L+DL + LA DQ+GCR LQ+ + S EE +++F +V + L++DPFG
Sbjct: 143 STPLKDL--DYAKLATDQFGCRFLQKKLESSSIEESNLVRDLMFEQVKPFLLNLILDPFG 200
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVL 260
NY++QK + + +QRT ++ + F +I +N +G R++ K+++ + N QQI+L++
Sbjct: 201 NYLIQKSCDFLTVDQRTVLIESIYQHVF---KISINQYGTRSLQKIIDTVDNDQQINLIV 257
Query: 261 AALRP------GAVTLTKDTNGHYVIQYCVKHF--SHEDTKYLLNEVADNCYGIATDKSG 312
P VTL D NG++VIQ C+ F S D +N I+T K G
Sbjct: 258 KGFSPEFTPIEQVVTLINDLNGNHVIQKCIFKFPSSKFDFIINAIIKNNNIITISTHKHG 317
Query: 313 CCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ--ITASLLRQ 370
CCVLQ + Q + +II L D +GNY++Q L ++ + + +
Sbjct: 318 CCVLQKLLSVCTLQQIFSISVKIIEFLPGLINDQFGNYIIQFLFDIKELDFFLLNEVFNK 377
Query: 371 LEGHYVSFSCNKYGSNVVERCLLE-----SGEEQSTRI-----------------IIELL 408
L SC K+ SNVVE+ + + +G Q I II++
Sbjct: 378 LANELCQLSCLKFSSNVVEKFIKKLFGIITGFMQGEYIPNVNDDIVNNTMNILLAIIDIF 437
Query: 409 RSPNVSMLLMHPFGNYVIQSALLVSKVRL 437
+ N+++L+ FGNY +Q+ L V +
Sbjct: 438 TT-NLNVLIRDNFGNYALQTLLDVKNYNM 465
>gi|410078768|ref|XP_003956965.1| hypothetical protein KAFR_0D01830 [Kazachstania africana CBS 2517]
gi|372463550|emb|CCF57830.1| hypothetical protein KAFR_0D01830 [Kazachstania africana CBS 2517]
Length = 833
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 156/312 (50%), Gaps = 31/312 (9%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+ + +DQYG R +Q+ +S E E++F E+ EL D FGNYV+QK
Sbjct: 484 LKDVFGHTLEFCQDQYGSRFIQKELSIAKSSEREVLFNEIRGYALELSNDVFGNYVIQKF 543
Query: 208 VELCSEEQRTRILLMLTNDDF--QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
E S+ Q+ ++ D F ++ + + R + K LE + Q++ LV L
Sbjct: 544 FEYGSKTQKDILV-----DQFKGKMKDLSTQMYACRVIQKALEFIEPEQRLDLV-TELDD 597
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
+ + KD NG++VIQ ++ ++L + + Y ++T GC V+Q +E+
Sbjct: 598 CVLKMIKDQNGNHVIQKAIECIPITSLPFILKSLIGHIYHLSTHSYGCRVIQRLLEFGSI 657
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLL------------ALRVPQITASLLRQLEG 373
++ ++ E+ L +D YGNYV+Q++L ++ + I ++ +
Sbjct: 658 KDQDTILNELKDFIPYLIQDQYGNYVIQYILQFDSTNIDETKTSMMMINIKKEIIDIVSD 717
Query: 374 HYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS---------PNVSMLLM--HPFG 422
+ V FS +K+ SNVVE+ +L +++ RII ++L N M+LM F
Sbjct: 718 NVVEFSKHKFASNVVEKAILYGSKDEKDRIISKILPKDKNHAANLEDNAPMILMMRDQFA 777
Query: 423 NYVIQSALLVSK 434
NYV+Q + V++
Sbjct: 778 NYVVQKLVSVTE 789
>gi|428162887|gb|EKX31992.1| hypothetical protein GUITHDRAFT_39628, partial [Guillardia theta
CCMP2712]
Length = 305
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 154/290 (53%), Gaps = 19/290 (6%)
Query: 161 DQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVEL-CSEEQRTRI 219
DQ+G R +Q + ++ +++F ++ LM D FGNYVVQK +E + R R
Sbjct: 1 DQHGSRFIQTKLDGANAQDRQLVFEALLPSSVGLMTDLFGNYVVQKFLERDLVKNGRNR- 59
Query: 220 LLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYV 279
LT Q++ + L+ +G R V K +E + P+Q LV L+ + +D NG++V
Sbjct: 60 ---LTCSIPQVLELSLDMYGCRVVQKAIEVIEGPRQEQLV-RELQGNVMKCVRDQNGNHV 115
Query: 280 IQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANA 339
IQ C++ + E ++++ + +A GC V+Q +E+ K Q +++EI+ +A
Sbjct: 116 IQKCIERSAPETVQFIVEDFIGQVVQLAMHPYGCRVIQRILEHCKHDQVAPILSEIVRSA 175
Query: 340 LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQ 399
L D YGNYVVQH+L Q ++L++ EG V+ S +K+ SNVVE+ L +
Sbjct: 176 KELVHDQYGNYVVQHVLEHGRGQDREAILQKCEGQIVAMSQHKFASNVVEKLL----QVL 231
Query: 400 STRIIIELL-----RSPNVSMLLMHPFGNYVIQSAL----LVSKVRLFSS 440
I+ E+ +P+V ++ +GNYV+Q AL V + RL ++
Sbjct: 232 LVTILDEVTGNQPSGAPSVLDMMRDAYGNYVVQKALDVCEGVDRARLIAA 281
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 117/244 (47%), Gaps = 19/244 (7%)
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSE 213
++ L+ D YGCR +Q+ + + E + E+ V + + D GN+V+QK +E +
Sbjct: 66 QVLELSLDMYGCRVVQKAIEVIEGPRQEQLVRELQGNVMKCVRDQNGNHVIQKCIERSAP 125
Query: 214 EQRTRILLMLTNDDF--QLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLT 271
E I+ +DF Q+V++ ++ +G R + ++LE+ + Q++ +L+ + A L
Sbjct: 126 ETVQFIV-----EDFIGQVVQLAMHPYGCRVIQRILEHCKHD-QVAPILSEIVRSAKELV 179
Query: 272 KDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERL 331
D G+YV+Q+ ++H +D + +L + ++ K V++ ++ +
Sbjct: 180 HDQYGNYVVQHVLEHGRGQDREAILQKCEGQIVAMSQHKFASNVVEKLLQVLLVT----I 235
Query: 332 VAEIIAN-------ALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYG 384
+ E+ N L + D YGNYVVQ L + A L+ + H + YG
Sbjct: 236 LDEVTGNQPSGAPSVLDMMRDAYGNYVVQKALDVCEGVDRARLIAAIREHLPAVRKFTYG 295
Query: 385 SNVV 388
+++
Sbjct: 296 KHII 299
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 5/136 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ D G +V LA YGCR +QR + +++ I E++ EL+ D +GNYVVQ +
Sbjct: 132 VEDFIGQVVQLAMHPYGCRVIQRILEHCKHDQVAPILSEIVRSAKELVHDQYGNYVVQHV 191
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL--TNPQQISLVLAALRP 265
+E + R I L + Q+V + + V KLL+ L T +++ + P
Sbjct: 192 LEHGRGQDREAI---LQKCEGQIVAMSQHKFASNVVEKLLQVLLVTILDEVTGNQPSGAP 248
Query: 266 GAVTLTKDTNGHYVIQ 281
+ + +D G+YV+Q
Sbjct: 249 SVLDMMRDAYGNYVVQ 264
>gi|407405537|gb|EKF30474.1| pumilio/PUF RNA binding protein 4, putative [Trypanosoma cruzi
marinkellei]
Length = 984
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 144/273 (52%), Gaps = 9/273 (3%)
Query: 152 RGNIVALAKDQYGCRHLQRTMSSLP--KEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVE 209
RG++V +A DQ+GCR LQ + P +E++ + E++ + ++M +GN++VQKL+E
Sbjct: 494 RGHVVEMASDQHGCRELQSVLERYPYRSQEVQCVVNELLPCLPQVMASSYGNFLVQKLLE 553
Query: 210 LCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVT 269
+ +E R ++L + L + ++ HG AV KL+++L + +++ +V AAL+ G +
Sbjct: 554 IAPDEDRLQMLSQHLSGS--LCEVAVSPHGNYAVQKLIDSLRSRREVEVVCAALQRGVLM 611
Query: 270 LTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRE 329
L D NG +V+Q ++ +D ++ + + + + DK GCCV+Q C++ + +
Sbjct: 612 LMNDLNGGHVVQKLIQCLP-QDVAFVYDAIVEMTIDVCNDKQGCCVVQKCMDSAPPERLP 670
Query: 330 RLVAEIIANALLLAEDCYGNYVVQHLL----ALRVPQITASLLRQLEGHYVSFSCNKYGS 385
+L ++ + L L YGNYVV HL+ A+ + + NK+ S
Sbjct: 671 QLQEAVLKHLLPLCMSPYGNYVVAHLIRHCDAMNQRHVVDRAAVCVGPALKMLCTNKFAS 730
Query: 386 NVVERCLLESGEEQSTRIIIELLRSPNVSMLLM 418
NVVE L EE ++ LL+ N L +
Sbjct: 731 NVVEIILSLCSEEVKVQLCRSLLQGSNEKTLFL 763
>gi|409194216|gb|AFV31434.1| pumilio [Hydractinia echinata]
Length = 979
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 144/278 (51%), Gaps = 8/278 (2%)
Query: 135 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDR 190
R++ L+D F L DL+ +IV ++DQ+G R +Q+ + E M+F E++
Sbjct: 705 RSKLLEDFRNNRFPNLQLHDLQRHIVEFSQDQHGSRFIQQKLERASILEKNMVFNEILTA 764
Query: 191 VCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENL 250
LM D FGNYV+QK E S EQ+ LL+ ++ + L +G R + K LE +
Sbjct: 765 AYSLMTDVFGNYVIQKFFEFGSPEQK---LLLAQRIKGHVLPLALQMYGCRVIQKALETI 821
Query: 251 TNPQQI-SLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATD 309
I S ++ L + KD NG++V+Q C++ +++++ + ++T
Sbjct: 822 PPEMTIHSELVRELDGHVLKCVKDQNGNHVVQKCIECVDSVQLQFIIDAFQGQVFALSTH 881
Query: 310 KSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLR 369
GC V+Q +E+ Q ++ E+ + L +D YGNYV+QH+L ++++
Sbjct: 882 PYGCRVIQRILEHCTTEQTSPILGELHEHTERLIQDQYGNYVIQHVLEHGSADDKSTIVN 941
Query: 370 QLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIEL 407
+ G+ + S +K+ SNV+E+C+ + + + +I E+
Sbjct: 942 IVRGNVLLLSQHKFASNVIEKCVSHASRAERSMLIEEV 979
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 40/224 (17%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
KLLE+ N + +L L L+ V ++D +G IQ ++ S + + NE+ Y
Sbjct: 707 KLLEDFRNNRFPNLQLHDLQRHIVEFSQDQHGSRFIQQKLERASILEKNMVFNEILTAAY 766
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q+ L I + L LA YG V+Q L P++T
Sbjct: 767 SLMTDVFGNYVIQKFFEFGSPEQKLLLAQRIKGHVLPLALQMYGCRVIQKALETIPPEMT 826
Query: 365 --ASLLRQLEGHYV------------------------------------SFSCNKYGSN 386
+ L+R+L+GH + + S + YG
Sbjct: 827 IHSELVRELDGHVLKCVKDQNGNHVVQKCIECVDSVQLQFIIDAFQGQVFALSTHPYGCR 886
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSAL 430
V++R L EQ++ I+ EL + L+ +GNYVIQ L
Sbjct: 887 VIQRILEHCTTEQTSPILGELHE--HTERLIQDQYGNYVIQHVL 928
>gi|321248782|ref|XP_003191239.1| RNA binding protein Pumilio [Cryptococcus gattii WM276]
gi|317457706|gb|ADV19452.1| Pumilio-like protein 2 (Pumilio-2) [Cryptococcus gattii WM276]
Length = 673
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 150/296 (50%), Gaps = 20/296 (6%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L D+ G+IV A DQ+G R +Q+ + E+ + +F E+ +LM D FGNYV QK+
Sbjct: 291 LNDIFGHIVEFAGDQHGSRFIQQKLEIATSEDRQKLFDEIYPNAYQLMTDVFGNYVTQKM 350
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + Q+ + + D +++++ + +G R V K L++L N Q+ +V A L P
Sbjct: 351 FEHGDQLQKAALAKKM---DGRVLQLSMQMYGCRVVQKALDHLLNEQRAKIV-AELEPHI 406
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYG----IATDKSGCCVLQHCVEYS 323
+ K +N ++V+Q + + + D+ G +A GC VLQ E
Sbjct: 407 LECVKSSNANHVVQRMINIGPPQS-------IPDSFIGHVEELAKHPYGCRVLQKAFENL 459
Query: 324 KGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKY 383
+ + L+ E+ + L ED +GNYV+Q ++ + P+ ++ QL+G + + +K+
Sbjct: 460 EDKMKRSLLDEMHECVIPLTEDQFGNYVIQSVITVGEPEDRNKIINQLKGRITTLARHKF 519
Query: 384 GSNVVERCLLESGEEQSTRIIIELLR-----SPNVSMLLMHPFGNYVIQSALLVSK 434
SNVVE+ L+ + +I EL+ + V MLL + N+ +Q+ + ++
Sbjct: 520 ASNVVEKALIHADPADRRVLIKELIDMQPDGTNQVGMLLRDAYANFPLQTGMFAAE 575
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 293 KYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
K+ LN++ + A D+ G +Q +E + R++L EI NA L D +GNYV
Sbjct: 288 KWELNDIFGHIVEFAGDQHGSRFIQQKLEIATSEDRQKLFDEIYPNAYQLMTDVFGNYVT 347
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q + A+L ++++G + S YG VV++ L EQ +I+ EL P+
Sbjct: 348 QKMFEHGDQLQKAALAKKMDGRVLQLSMQMYGCRVVQKALDHLLNEQRAKIVAEL--EPH 405
Query: 413 VSMLLMHPFGNYVIQ 427
+ + N+V+Q
Sbjct: 406 ILECVKSSNANHVVQ 420
>gi|167393984|ref|XP_001740790.1| pumilio domain-containing protein C6G9.14 [Entamoeba dispar SAW760]
gi|165894881|gb|EDR22713.1| pumilio domain-containing protein C6G9.14, putative [Entamoeba
dispar SAW760]
Length = 435
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 148/285 (51%), Gaps = 5/285 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
+ + +G + K GC LQ+ + KE + +IF E+ D + EL+ P G Y++ K+
Sbjct: 119 VSEFQGQFYQMTKYASGCSLLQKLLDGASKESVLLIFKEIEDSLEELITHPNGQYILPKI 178
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
VE SEE + + +++ + LV+ C + G V K+ + I + LR
Sbjct: 179 VEFGSEEIKDNVFGVVSEN---LVKYCCHQFGGYTVQKIAP-FMRERHIQIWSPILRNNI 234
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
L D + +YVIQ +K F+ +++ + + D I+ K GC VL H ++ S Q
Sbjct: 235 AILIIDPHANYVIQTLLKIFNEKNSDFFYRGLKDCVVDISKTKIGCSVLTHAMDNSTIQQ 294
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
+ ++++N L +D YGN+++QHL+ P I + ++ +++ + V +S K+ SNV
Sbjct: 295 INSIKPQLLSNCCDLIQDQYGNFIIQHLME-NDPTIISDIIHKIKDNIVFYSKQKFSSNV 353
Query: 388 VERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLV 432
VE+CL S E ++ L + ++ L+ +GN+VIQ+ L V
Sbjct: 354 VEKCLKCSTENVRQPLLDVLSQPESLVALVEDQYGNFVIQAFLDV 398
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 89/183 (48%), Gaps = 18/183 (9%)
Query: 253 PQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSG 312
PQ++ ++ + ++ L+ + N + + K +++E Y + SG
Sbjct: 86 PQELEKIVKSFSLPSIKLSTNINPN----------KKAEQKVIVSEFQGQFYQMTKYASG 135
Query: 313 CCVLQHCVEYSKGAQRER--LVAEIIANALL-LAEDCYGNYVVQHLLALRVPQITASLLR 369
C +LQ ++ GA +E L+ + I ++L L G Y++ ++ +I ++
Sbjct: 136 CSLLQKLLD---GASKESVLLIFKEIEDSLEELITHPNGQYILPKIVEFGSEEIKDNVFG 192
Query: 370 QLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSA 429
+ + V + C+++G V++ + E+ +I +LR+ N+++L++ P NYVIQ+
Sbjct: 193 VVSENLVKYCCHQFGGYTVQK-IAPFMRERHIQIWSPILRN-NIAILIIDPHANYVIQTL 250
Query: 430 LLV 432
L +
Sbjct: 251 LKI 253
>gi|224117628|ref|XP_002317626.1| predicted protein [Populus trichocarpa]
gi|222860691|gb|EEE98238.1| predicted protein [Populus trichocarpa]
Length = 502
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 139/289 (48%), Gaps = 11/289 (3%)
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEV-------IDRVCELMIDPFGNYVVQK 206
+IV DQ+G R +Q + E I+ +V I V ELM+D G +V +
Sbjct: 176 SIVNYCSDQHGSRTIQGLLRLRNPEITREIYNKVLALSSRGIAVVLELMLDQHGWHVFGE 235
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
L++ + +Q I +T + V + L+THG ++ K++ L ++LV+ LR
Sbjct: 236 LIDALNYQQLKLITYEITKNLDNFVSLTLDTHGSNSIRKVIRLLRRSPLVTLVMNNLRAA 295
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
T+ + G Y + C S ED + L + C +A D G L + +G
Sbjct: 296 FFTIMTNRIGSYAVSECFNQLSAEDNRLLYEAAIECCLDLAIDHEGSLALIRVINTIQGL 355
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
QR RL+ + L++D GNYVVQ +++L P T + L G+Y + S K GS+
Sbjct: 356 QRYRLLDILSTYVAFLSQDPKGNYVVQKVISLNNPLFTQKICHHLRGYYGTISLQKGGSH 415
Query: 387 VVERCLLESGEEQSTRIIIELLRSPNVSM-LLMHPFGNYVIQSALLVSK 434
+ E+CL E + +I + L + N + + FGNYVIQ AL V+K
Sbjct: 416 IAEKCL---DTEWKSWVIEDFLSNTNTLLQVAKDEFGNYVIQKALKVTK 461
>gi|154343920|ref|XP_001567904.1| putative pumilio protein 6 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065238|emb|CAM40666.1| putative pumilio protein 6 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 818
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 139/276 (50%), Gaps = 23/276 (8%)
Query: 134 KRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCE 193
K +QW L DL G V AKDQ G R +Q + S E ++++F E+ + E
Sbjct: 393 KTSQW--------RLEDLNGYAVEFAKDQEGSRFIQSAVDSASPESLDILFHEIFEAPLE 444
Query: 194 LMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNP 253
L+ D FGNYV+QKL++ + Q T + +V + + T+G R + K +E + P
Sbjct: 445 LVTDIFGNYVLQKLLDKGNTPQLTFAAERMCG---HVVELTMQTYGCRVIQKCIE-VMPP 500
Query: 254 QQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGC 313
+ ++LA L+ +D NG++VIQ CV+ + ++++ + +AT GC
Sbjct: 501 AGLDIILAELKDNVAKCIQDQNGNHVIQKCVEVIPQQ-CGFIISAFSGRVMELATHAYGC 559
Query: 314 ----CVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLA-LRVPQITASLL 368
C++QHC E Q + + E++ +LA+D YGNYV+QH+L ++ S+
Sbjct: 560 RVIQCIMQHCPE-----QEDTIFNELLKAVDVLAKDQYGNYVIQHVLQNVKDENKIESVY 614
Query: 369 RQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRII 404
L+ + S K+ SNV+E+ S E I+
Sbjct: 615 AALKPKFFYLSKQKFASNVMEKLYARSSPENRMAIV 650
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 5/200 (2%)
Query: 231 VRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHE 290
V + G R + +++ + P+ + ++ + + L D G+YV+Q + +
Sbjct: 407 VEFAKDQEGSRFIQSAVDSAS-PESLDILFHEIFEAPLELVTDIFGNYVLQKLLDKGNTP 465
Query: 291 DTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNY 350
+ + + + GC V+Q C+E A + ++AE+ N +D GN+
Sbjct: 466 QLTFAAERMCGHVVELTMQTYGCRVIQKCIEVMPPAGLDIILAELKDNVAKCIQDQNGNH 525
Query: 351 VVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRS 410
V+Q + + +PQ ++ G + + + YG V++ C+++ EQ I ELL++
Sbjct: 526 VIQKCVEV-IPQQCGFIISAFSGRVMELATHAYGCRVIQ-CIMQHCPEQEDTIFNELLKA 583
Query: 411 PNVSMLLMHPFGNYVIQSAL 430
V +L +GNYVIQ L
Sbjct: 584 --VDVLAKDQYGNYVIQHVL 601
>gi|388583020|gb|EIM23323.1| ARM repeat-containing protein [Wallemia sebi CBS 633.66]
Length = 373
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 157/325 (48%), Gaps = 32/325 (9%)
Query: 132 SLKRNQWLQDSFDCSS----LRDLR--------------GNIVALAKDQYGCRHLQRTMS 173
S+K NQ L F ++ L D R G + A DQ G R +Q+ +
Sbjct: 3 SMKSNQHLASEFKSTNRSAVLEDFRVNGKHTKPELHNIFGYVTEFATDQLGSRFIQQKLD 62
Query: 174 SLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRI 233
+ P E + +F E+ EL D FGNYV+QKL E +++QR R++ + + + +
Sbjct: 63 NAPPESLMRVFEEIFPNTVELSSDVFGNYVIQKLFEHGTQDQRLRLVNKIKD---CVPTL 119
Query: 234 CLNTHGIRAVLKLLENLTNPQQISLV--LAALRPGAVTLTKDTNGHYVIQYCVKHFSHED 291
+G R V K +E + +Q+ LV + + AV +D N ++VIQ ++ +
Sbjct: 120 SFQMYGCRVVQKAIECVEEAEQLELVKRVETITERAV---QDQNANHVIQRIIERVDPDK 176
Query: 292 TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYV 351
A+N +AT GC VLQ E+ A+ L+ ++ + L D +GNYV
Sbjct: 177 LGNFPEVFANNAKELATHPYGCRVLQRSFEHIGQARSRELIEQLHESVDNLVVDMFGNYV 236
Query: 352 VQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELL-RS 410
VQ+LL + + ++ ++ + + +K+ SNV E+ L+++ E+ +I L+ RS
Sbjct: 237 VQYLLEFGTDEDRSRIVVKINQRFFELARHKFASNVCEKALIKANEKDKEMLIYRLIDRS 296
Query: 411 PNVSM-----LLMHPFGNYVIQSAL 430
S+ L+ FGNYV+Q A+
Sbjct: 297 DEASVDGIPSLMKDQFGNYVLQRAI 321
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSE 213
N LA YGCR LQR+ + + + ++ + V L++D FGNYVVQ L+E ++
Sbjct: 187 NAKELATHPYGCRVLQRSFEHIGQARSRELIEQLHESVDNLVVDMFGNYVVQYLLEFGTD 246
Query: 214 EQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVL-----AALRPGAV 268
E R+RI++ + F+L R ++ L + N + + + L A G
Sbjct: 247 EDRSRIVVKINQRFFELARHKFASNVCEKAL-IKANEKDKEMLIYRLIDRSDEASVDGIP 305
Query: 269 TLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGI 306
+L KD G+YV+Q + S L+ +++ I
Sbjct: 306 SLMKDQFGNYVLQRAINAVSRSQAHLLIAAISEELDNI 343
>gi|221504265|gb|EEE29940.1| pumilio, putative [Toxoplasma gondii VEG]
Length = 1913
Score = 127 bits (318), Expect = 2e-26, Method: Composition-based stats.
Identities = 81/293 (27%), Positives = 148/293 (50%), Gaps = 11/293 (3%)
Query: 147 SLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQK 206
+LRD+ N + AKD + LQ + + P + I +++ +L +D GNYV+QK
Sbjct: 989 TLRDVGPNALEFAKDPFAAVFLQEQLETCPLADRVPILFQLLPHALDLAVDQHGNYVLQK 1048
Query: 207 LVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E S++++ + LT+ F R+ L +G R + + +E+L P Q+ LV L+
Sbjct: 1049 FFETGSDKEKEWLAAQLTDHVF---RLSLEVYGCRVIQRAVESLPVPAQLRLV-RELKDH 1104
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
+T +D +G++VIQ C + +++++ ++ GC V+Q +E +
Sbjct: 1105 VITCVEDQHGNHVIQKCAERLPSPSVQFIIDAFKGQEARMSVHSYGCRVIQRLLEACPMS 1164
Query: 327 QRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSN 386
Q L+ ++A +L D +GNYVVQH+L ++ + ++ S KY N
Sbjct: 1165 QVAALIDVVMAELCMLIRDQFGNYVVQHVLEFGRDADKMKIIDFMCEDIIALSTEKYACN 1224
Query: 387 VVERCLLESGEEQSTRIII------ELLRSPNVSMLLMHPFGNYVIQSALLVS 433
VVER L + ++ R II E++ P + M+++ +GNYV+Q + V+
Sbjct: 1225 VVERALTLNAMGRARRRIITAALGPEMMGQP-LKMVMLDRYGNYVVQRMMEVA 1276
Score = 75.1 bits (183), Expect = 7e-11, Method: Composition-based stats.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 28/240 (11%)
Query: 136 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI 188
N LQ F+ S ++ L ++ L+ + YGCR +QR + SLP + E+
Sbjct: 1043 NYVLQKFFETGSDKEKEWLAAQLTDHVFRLSLEVYGCRVIQRAVESLPVPAQLRLVRELK 1102
Query: 189 DRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDF--QLVRICLNTHGIRAVLKL 246
D V + D GN+V+QK E I+ D F Q R+ ++++G R + +L
Sbjct: 1103 DHVITCVEDQHGNHVIQKCAERLPSPSVQFII-----DAFKGQEARMSVHSYGCRVIQRL 1157
Query: 247 LENLTNPQ---QISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNC 303
LE Q I +V+A L L +D G+YV+Q+ ++ D +++ + ++
Sbjct: 1158 LEACPMSQVAALIDVVMAEL----CMLIRDQFGNYVVQHVLEFGRDADKMKIIDFMCEDI 1213
Query: 304 YGIATDKSGCCVLQHCVEYSK-GAQRERLVA-----EIIANAL-LLAEDCYGNYVVQHLL 356
++T+K C V++ + + G R R++ E++ L ++ D YGNYVVQ ++
Sbjct: 1214 IALSTEKYACNVVERALTLNAMGRARRRIITAALGPEMMGQPLKMVMLDRYGNYVVQRMM 1273
Score = 47.8 bits (112), Expect = 0.011, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 2/136 (1%)
Query: 292 TKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYV 351
+ + L +V N A D LQ +E A R ++ +++ +AL LA D +GNYV
Sbjct: 986 SPFTLRDVGPNALEFAKDPFAAVFLQEQLETCPLADRVPILFQLLPHALDLAVDQHGNYV 1045
Query: 352 VQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSP 411
+Q + L QL H S YG V++R + R++ EL
Sbjct: 1046 LQKFFETGSDKEKEWLAAQLTDHVFRLSLEVYGCRVIQRAVESLPVPAQLRLVREL--KD 1103
Query: 412 NVSMLLMHPFGNYVIQ 427
+V + GN+VIQ
Sbjct: 1104 HVITCVEDQHGNHVIQ 1119
>gi|123471212|ref|XP_001318807.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
gi|121901575|gb|EAY06584.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
Length = 407
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 146/278 (52%), Gaps = 10/278 (3%)
Query: 156 VALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQ 215
V ++KD R+LQ+ M P+ E MIF + + EL+ D N+V+QKL E + EQ
Sbjct: 89 VIMSKDPNKSRNLQKRMQECPQSERNMIFNALSPYLNELVYDQSANFVIQKLCEGATPEQ 148
Query: 216 RTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTN 275
+ +L D + I ++ R + + +E T + + + AL P ++L N
Sbjct: 149 QKIMLDFFLTD---INNIVDHSIACRVLQRFIECSTEMKNVDTLFKALLPNLMSLCFSQN 205
Query: 276 GHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEI 335
G++++Q V + ++ + N +A D GC ++Q E K Q +V E+
Sbjct: 206 GNHIVQRFVVALP-DRLNTIIESILPNVIPLAIDNCGCRIVQRLFEQYKINQLSLIVNEV 264
Query: 336 IANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLES 395
+ +++ LA + YGNYVVQ++L+ + ++LL+ +G + SFS +K+ SNV+E+C+ +
Sbjct: 265 MKHSVDLATNQYGNYVVQYILSSGQTEYVSALLKSFKGKFYSFSIHKFASNVIEKCIRGA 324
Query: 396 GEEQSTRIIIELLRS------PNVSMLLMHPFGNYVIQ 427
+++ I E++ + P + ++ FGNYVIQ
Sbjct: 325 SDQEREDIFDEIIGTSGNFNHPRILSMVEDQFGNYVIQ 362
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 107/236 (45%), Gaps = 14/236 (5%)
Query: 164 GCRHLQRTMS-SLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLM 222
CR LQR + S + ++ +F ++ + L GN++VQ+ V + T I +
Sbjct: 169 ACRVLQRFIECSTEMKNVDTLFKALLPNLMSLCFSQNGNHIVQRFVVALPDRLNTIIESI 228
Query: 223 LTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQY 282
L N ++ + ++ G R V +L E Q+SL++ + +V L + G+YV+QY
Sbjct: 229 LPN----VIPLAIDNCGCRIVQRLFEQY-KINQLSLIVNEVMKHSVDLATNQYGNYVVQY 283
Query: 283 CVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANA--- 339
+ E LL Y + K V++ C+ + +RE + EII +
Sbjct: 284 ILSSGQTEYVSALLKSFKGKFYSFSIHKFASNVIEKCIRGASDQEREDIFDEIIGTSGNF 343
Query: 340 -----LLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVER 390
L + ED +GNYV+Q ++ P+ ++ + +Y +Y +V++R
Sbjct: 344 NHPRILSMVEDQFGNYVIQRIIEFGTPEQQTAVFEVVYDNYDRLYSLQYARHVLQR 399
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSE 213
N++ LA D GCR +QR ++ +I EV+ +L + +GNYVVQ ++ S
Sbjct: 231 NVIPLAIDNCGCRIVQRLFEQYKINQLSLIVNEVMKHSVDLATNQYGNYVVQYIL---SS 287
Query: 214 EQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAAL-------RPG 266
Q + +L + + ++ + K + ++ ++ + + P
Sbjct: 288 GQTEYVSALLKSFKGKFYSFSIHKFASNVIEKCIRGASDQEREDIFDEIIGTSGNFNHPR 347
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADN 302
+++ +D G+YVIQ ++ + E + V DN
Sbjct: 348 ILSMVEDQFGNYVIQRIIEFGTPEQQTAVFEVVYDN 383
>gi|118378471|ref|XP_001022411.1| Pumilio-family RNA binding repeat containing protein [Tetrahymena
thermophila]
gi|89304178|gb|EAS02166.1| Pumilio-family RNA binding repeat containing protein [Tetrahymena
thermophila SB210]
Length = 977
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 148/304 (48%), Gaps = 25/304 (8%)
Query: 146 SSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQ 205
+ L +++ KDQ R +Q+ + EE IF + LM D FGNYV+Q
Sbjct: 541 QNFNQLFPDLIESCKDQNSSRTIQKQFENSTIEEKNKIFERIQPEALNLMKDQFGNYVIQ 600
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTN-PQQISLVLAALR 264
KL E + E + ++ ++ + + ++ L+T+G R + K LE L PQ ++ L
Sbjct: 601 KLFEKGTIEHKEKLYYIIKGN---VEQLSLHTYGCRVIQKALEELKERPQMQEGLIQELN 657
Query: 265 PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNC-------------------YG 305
+T +D NG++VIQ C + S ++NEV N
Sbjct: 658 NKIMTCIQDQNGNHVIQKCFETLSSSKLTTIINEVIQNVNLELQNKYLFNKNKFYQKIEE 717
Query: 306 IATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITA 365
+A GC V+Q +E+ + +++ +++ N + L E YGNY++Q+++
Sbjct: 718 LAFHPYGCRVIQRILEFCSNPETKKIYEKLMTNLIRLCECQYGNYIIQYIIEKGQKLEKD 777
Query: 366 SLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLM--HPFGN 423
+L+ ++ H+V S NK+ SNV E+ ++ S EE ++ LLR N + L + + FGN
Sbjct: 778 EILQVVKVHFVDLSLNKFASNVTEKSIVYSDEEFKAGVLDVLLRPNNQNHLELTKNAFGN 837
Query: 424 YVIQ 427
YV+Q
Sbjct: 838 YVVQ 841
>gi|2204253|emb|CAA97457.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 769
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 119/211 (56%), Gaps = 8/211 (3%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L+D+ G+ + KDQ+G R +QR +++ P E E+IF E+ D EL D FGNYV+QK
Sbjct: 536 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 595
Query: 208 VELCSEEQRTRILLMLTNDDFQ--LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRP 265
E S+ Q+ ++ D F+ + ++ L + R + K LE + + Q+I LVL L
Sbjct: 596 FEFGSKIQKNTLV-----DQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVL-ELSD 649
Query: 266 GAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKG 325
+ + KD NG++VIQ ++ E ++L+ + + Y ++T GC V+Q +E+
Sbjct: 650 SVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSS 709
Query: 326 AQRERLVAEIIANALLLAEDCYGNYVVQHLL 356
+E ++ E+ L +D YGNYV+Q++L
Sbjct: 710 EDQESILNELKDFIPYLIQDQYGNYVIQYVL 740
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 5/201 (2%)
Query: 231 VRICLNTHGIRAVLKLLENLTNP-QQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSH 289
+ C + HG R + + L T+P + ++ +R A+ L+ D G+YVIQ + S
Sbjct: 544 LEFCKDQHGSRFIQREL--ATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKFFEFGSK 601
Query: 290 EDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGN 349
L+++ N ++ C V+Q +EY QR LV E+ + L + +D GN
Sbjct: 602 IQKNTLVDQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVLELSDSVLQMIKDQNGN 661
Query: 350 YVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLR 409
+V+Q + + +L L GH S + YG V++R LLE G + I+ L+
Sbjct: 662 HVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQR-LLEFGSSEDQESILNELK 720
Query: 410 SPNVSMLLMHPFGNYVIQSAL 430
+ L+ +GNYVIQ L
Sbjct: 721 D-FIPYLIQDQYGNYVIQYVL 740
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
L L G+I L+ YGCR +QR + E+ E I E+ D + L+ D +GNYV+Q +
Sbjct: 680 LSSLTGHIYHLSTHSYGCRVIQRLLEFGSSEDQESILNELKDFIPYLIQDQYGNYVIQYV 739
Query: 208 VE 209
++
Sbjct: 740 LQ 741
>gi|195572367|ref|XP_002104167.1| GD20820 [Drosophila simulans]
gi|194200094|gb|EDX13670.1| GD20820 [Drosophila simulans]
Length = 701
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 126/245 (51%), Gaps = 4/245 (1%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKL 207
LRDL +IV ++DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK
Sbjct: 450 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 509
Query: 208 VELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGA 267
E + EQ+ + + + QL L +G R + K LE+++ P+Q ++ L
Sbjct: 510 FEFGTPEQKNTLGMQVKGHVLQL---ALQMYGCRVIQKALESIS-PEQQQEIVHELDGHV 565
Query: 268 VTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQ 327
+ KD NG++V+Q C++ ++++N Y ++T GC V+Q +E+ Q
Sbjct: 566 LKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQ 625
Query: 328 RERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNV 387
++ E+ + L +D YGNYV+QH+L + + L+ + G + S +K+ +
Sbjct: 626 TTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFAQTL 685
Query: 388 VERCL 392
L
Sbjct: 686 WRNAL 690
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 3/201 (1%)
Query: 230 LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSH 289
+V + HG R + + LE T ++ +V + + A +L D G+YVIQ + +
Sbjct: 457 IVEFSQDQHGSRFIQQKLERATAAEK-QMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTP 515
Query: 290 EDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGN 349
E L +V + +A GC V+Q +E Q++ +V E+ + L +D GN
Sbjct: 516 EQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGN 575
Query: 350 YVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLR 409
+VVQ + P ++ +G S S + YG V++R L EQ+T I+ EL
Sbjct: 576 HVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHE 635
Query: 410 SPNVSMLLMHPFGNYVIQSAL 430
+ L+ +GNYVIQ L
Sbjct: 636 --HTEQLIQDQYGNYVIQHVL 654
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 245 KLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCY 304
+LLE+ N + +L L L V ++D +G IQ ++ + + + + +E+ Y
Sbjct: 435 RLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAY 494
Query: 305 GIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQIT 364
+ TD G V+Q E+ Q+ L ++ + L LA YG V+Q L P+
Sbjct: 495 SLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQ 554
Query: 365 ASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPNVSMLLMHPFGNY 424
++ +L+GH + ++ G++VV++C +E + + + II + V L HP+G
Sbjct: 555 QEIVHELDGHVLKCVKDQNGNHVVQKC-IECVDPVALQFIINAFKG-QVYSLSTHPYGCR 612
Query: 425 VIQSAL 430
VIQ L
Sbjct: 613 VIQRIL 618
>gi|167392700|ref|XP_001740261.1| pumilio [Entamoeba dispar SAW760]
gi|165895722|gb|EDR23351.1| pumilio, putative [Entamoeba dispar SAW760]
Length = 525
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 151/301 (50%), Gaps = 12/301 (3%)
Query: 154 NIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSE 213
+ V+++K+ G R +Q+++ ++E + I+ + D + EL D F NYV+QK +E E
Sbjct: 210 DYVSMSKEHNGSRTVQQSIEKGSEDERQKIWRALQDHIVELSSDLFANYVIQKALEFIPE 269
Query: 214 EQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKD 273
+ M N ++R+ L+ +G R V K +E ++ + L+ LR V +D
Sbjct: 270 SRHIVPQKMKGN----VLRLTLHMYGCRVVQKAVEYVSMKDR-RLLFEELRKSLVRCIED 324
Query: 274 TNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVA 333
NG++VIQ CV+ + ++N + GC V+Q +E L+
Sbjct: 325 QNGNHVIQKCVEKGDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIESVDYDCVTELLQ 384
Query: 334 EIIANALLLAEDCYGNYVVQHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLL 393
I ++L L ED YGNYVVQ++L P ++L+Q++G+ V S KY SNV+E+C
Sbjct: 385 VIEPHSLDLTEDQYGNYVVQNVLERGYPNDRHNILQQIKGNIVRLSMGKYSSNVIEKCFK 444
Query: 394 ESGEEQSTRIIIELLRSPNVSMLLMHPFGNYVIQSALLV-------SKVRLFSSPPISVC 446
+ + +I+ E+ ++ + ++ F NYV+Q + V LF P +S+
Sbjct: 445 FATPNERQQILEEIYQNNGILQMMQDQFANYVVQKIIEAIDSLEREKIVELFIKPNLSIL 504
Query: 447 K 447
K
Sbjct: 505 K 505
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 115/212 (54%), Gaps = 10/212 (4%)
Query: 149 RDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLV 208
+ ++GN++ L YGCR +Q+ + + ++ ++F E+ + + D GN+V+QK V
Sbjct: 276 QKMKGNVLRLTLHMYGCRVVQKAVEYVSMKDRRLLFEELRKSLVRCIEDQNGNHVIQKCV 335
Query: 209 ELCSEEQRTRILLMLTNDDFQ--LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPG 266
E+ R ++M + Q ++ C + +G R V +++E++ + ++ +L + P
Sbjct: 336 -----EKGDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIESV-DYDCVTELLQVIEPH 389
Query: 267 AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVADNCYGIATDKSGCCVLQHCVEYSKGA 326
++ LT+D G+YV+Q ++ D +L ++ N ++ K V++ C +++
Sbjct: 390 SLDLTEDQYGNYVVQNVLERGYPNDRHNILQQIKGNIVRLSMGKYSSNVIEKCFKFATPN 449
Query: 327 QRERLVAEIIAN--ALLLAEDCYGNYVVQHLL 356
+R++++ EI N L + +D + NYVVQ ++
Sbjct: 450 ERQQILEEIYQNNGILQMMQDQFANYVVQKII 481
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 148 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVI--DRVCELMIDPFGNYVVQ 205
L+ ++GNIV L+ +Y +++ E + I E+ + + ++M D F NYVVQ
Sbjct: 419 LQQIKGNIVRLSMGKYSSNVIEKCFKFATPNERQQILEEIYQNNGILQMMQDQFANYVVQ 478
Query: 206 KLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTN 252
K++E +R +I+ + + +++ T + +L LLE L +
Sbjct: 479 KIIEAIDSLEREKIVELFIKPNLSILKKVTYT---KHILNLLETLDD 522
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 294 YLLNE-VADNCYGIATDKSGCCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVV 352
Y +NE VA + ++ + +G +Q +E +R+++ + + + L+ D + NYV+
Sbjct: 201 YPINENVALDYVSMSKEHNGSRTVQQSIEKGSEDERQKIWRALQDHIVELSSDLFANYVI 260
Query: 353 QHLLALRVPQITASLLRQLEGHYVSFSCNKYGSNVVERCLLESGEEQSTRIIIELLRSPN 412
Q L +P+ + ++++G+ + + + YG VV++ +E + R++ E LR
Sbjct: 261 QKALEF-IPESRHIVPQKMKGNVLRLTLHMYGCRVVQKA-VEYVSMKDRRLLFEELRKSL 318
Query: 413 VSMLLMHPFGNYVIQSAL 430
V + GN+VIQ +
Sbjct: 319 VR-CIEDQNGNHVIQKCV 335
>gi|302307392|ref|NP_984040.2| ADL056Wp [Ashbya gossypii ATCC 10895]
gi|299788979|gb|AAS51864.2| ADL056Wp [Ashbya gossypii ATCC 10895]
gi|374107253|gb|AEY96161.1| FADL056Wp [Ashbya gossypii FDAG1]
Length = 807
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 136/262 (51%), Gaps = 17/262 (6%)
Query: 144 DCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIE---MIFVEVIDRVCELMIDPFG 200
D SL + + LA DQYGCR LQR + + P E + +++ ++ + +L++DPFG
Sbjct: 155 DLGSLPIEELDYLQLATDQYGCRFLQRKLEN-PAESNQVRDLMYSQIKPYLLDLILDPFG 213
Query: 201 NYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVL 260
NY++QKL E + +Q+T ++ + F+ I +N +G R++ K+++ Q I +++
Sbjct: 214 NYLIQKLCEYLTLDQKTSMIQDIYTHVFE---ISINQYGTRSLQKIIDTTETEQHIDMIV 270
Query: 261 AALRPG------AVTLTKDTNGHYVIQYCVKHFSHEDTKYLLNEVA--DNCYGIATDKSG 312
+ VTL D NG++VIQ C+ F ++++ + DN I+T K G
Sbjct: 271 SGFSQQFTSINQVVTLINDLNGNHVIQKCIFKFQPTKFDFIIDAIVEKDNIIKISTHKHG 330
Query: 313 CCVLQHCVEYSKGAQRERLVAEIIANALLLAEDCYGNYVVQHLLALRVPQ--ITASLLRQ 370
CCVLQ + Q ++ +II L D +GNY++Q L ++ + + +
Sbjct: 331 CCVLQKLLSVCTLQQIFKISVKIIQYLPGLINDQFGNYIIQFLFDIKELDFYLLGEIFSK 390
Query: 371 LEGHYVSFSCNKYGSNVVERCL 392
L SC K+ SNVVE+ +
Sbjct: 391 LSHELCQLSCLKFSSNVVEKFI 412
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,867,703,541
Number of Sequences: 23463169
Number of extensions: 276840408
Number of successful extensions: 758131
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1562
Number of HSP's successfully gapped in prelim test: 382
Number of HSP's that attempted gapping in prelim test: 733500
Number of HSP's gapped (non-prelim): 7180
length of query: 449
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 303
effective length of database: 8,933,572,693
effective search space: 2706872525979
effective search space used: 2706872525979
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)