BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037509
(108 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356543350|ref|XP_003540124.1| PREDICTED: ATPase family AAA domain-containing protein 3-B-like
[Glycine max]
Length = 617
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 56/115 (48%), Positives = 63/115 (54%), Gaps = 40/115 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYTA---------------------------DDTLMEA 43
E+LEFPLPG+EE FKLLKLYLDKY A DD + EA
Sbjct: 497 EVLEFPLPGEEERFKLLKLYLDKYIAQAGSGKSGFVKDLFKEKPQQIEIKGLTDDIIKEA 556
Query: 44 AAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAA 85
AAK EG S A Y SENCV+ PSL +VDYKV++HQQRRKLAA
Sbjct: 557 AAKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAEHQQRRKLAA 611
>gi|356540916|ref|XP_003538930.1| PREDICTED: ATPase family AAA domain-containing protein 3-B-like
[Glycine max]
Length = 620
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 55/115 (47%), Positives = 62/115 (53%), Gaps = 40/115 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYTA---------------------------DDTLMEA 43
E+LEFPLPG+EE FKLLKLYLDKY A DD + EA
Sbjct: 500 EVLEFPLPGEEERFKLLKLYLDKYIAQAGSGKSSFVKDLFKGKPQQIEIKGLTDDIIKEA 559
Query: 44 AAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAA 85
AAK EG S A Y SENCV+ PSL +VDYKV++HQQR KLAA
Sbjct: 560 AAKTEGFSGREIAKLMASVQAAVYGSENCVLDPSLFREVVDYKVAEHQQRIKLAA 614
>gi|449468269|ref|XP_004151844.1| PREDICTED: ATPase family AAA domain-containing protein 3-like
[Cucumis sativus]
gi|449517959|ref|XP_004166011.1| PREDICTED: ATPase family AAA domain-containing protein 3-like
[Cucumis sativus]
Length = 638
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 54/119 (45%), Positives = 64/119 (53%), Gaps = 40/119 (33%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYTA---------------------------DDTLMEA 43
E+LEFPLPG+EE FKLLKLYL+KY A DD + EA
Sbjct: 516 EVLEFPLPGEEERFKLLKLYLEKYIANAGLRKSGLFQNVFKGQQKKIEIKGLTDDIIHEA 575
Query: 44 AAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIGGG 89
AAK +G S A Y SE CV+ P+L +VDYKV++HQQRRKLAA GG
Sbjct: 576 AAKTDGFSGREIAKLMASVQAAVYGSETCVLDPNLFREVVDYKVAEHQQRRKLAASEGG 634
>gi|225454791|ref|XP_002274077.1| PREDICTED: ATPase family AAA domain-containing protein 3-B [Vitis
vinifera]
gi|297737323|emb|CBI26524.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/120 (45%), Positives = 65/120 (54%), Gaps = 40/120 (33%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYTA---------------------------DDTLMEA 43
E+LEFPLPG++E FKLLKLYLDKY A D+ + EA
Sbjct: 511 EVLEFPLPGEDERFKLLKLYLDKYIAHAGEKKSSWFKQLFQRQQQKIEIKGLTDEVIREA 570
Query: 44 AAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIGGGS 90
AAK EG S A Y SENCV+ +L +VDYKV++HQQR+KLAA GGS
Sbjct: 571 AAKTEGFSGREIAKLMASVQAAVYGSENCVLDSNLFREVVDYKVAEHQQRKKLAASDGGS 630
>gi|147794810|emb|CAN78021.1| hypothetical protein VITISV_015517 [Vitis vinifera]
Length = 626
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/120 (45%), Positives = 65/120 (54%), Gaps = 40/120 (33%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYTA---------------------------DDTLMEA 43
E+LEFPLPG++E FKLLKLYLDKY A D+ + EA
Sbjct: 506 EVLEFPLPGEDERFKLLKLYLDKYIAHAGEKKSSWFKQLFQRQQQKIEIKGLTDEVIREA 565
Query: 44 AAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIGGGS 90
AAK EG S A Y SENCV+ +L +VDYKV++HQQR+KLAA GGS
Sbjct: 566 AAKTEGFSGREIAKLMASVQAAVYGSENCVLDSNLFREVVDYKVAEHQQRKKLAASDGGS 625
>gi|255544708|ref|XP_002513415.1| Proteasome-activating nucleotidase, putative [Ricinus communis]
gi|223547323|gb|EEF48818.1| Proteasome-activating nucleotidase, putative [Ricinus communis]
Length = 685
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 55/136 (40%), Positives = 70/136 (51%), Gaps = 42/136 (30%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYTA----------------------------DDTLME 42
E+LEFPLPG+ E FKLLKLYLDKY A DD L E
Sbjct: 540 EVLEFPLPGEGERFKLLKLYLDKYIAQAGSTKSGGWFRNLFKKQPQKIEIKGLTDDILKE 599
Query: 43 AAAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIGGG 89
AAAK EG S A Y S+NCV+ SL +VDYKV++HQQR KLA+ G
Sbjct: 600 AAAKTEGFSGREIAKLMASVQAAVYGSQNCVLDTSLFREVVDYKVAEHQQRSKLASKSEG 659
Query: 90 SERFRNDIFILIRHFS 105
+R + + + ++ F+
Sbjct: 660 -KRLLSGLKLQVQDFA 674
>gi|357495863|ref|XP_003618220.1| ATPase family AAA domain-containing protein [Medicago truncatula]
gi|355493235|gb|AES74438.1| ATPase family AAA domain-containing protein [Medicago truncatula]
Length = 430
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 61/114 (53%), Gaps = 39/114 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYTA--------------------------DDTLMEAA 44
E+LEFPLPG+EE +KLLKLYLDKY A DD + EAA
Sbjct: 313 EVLEFPLPGEEERYKLLKLYLDKYIAQAGSRQSGLSSLFKANPQKIEIKGLSDDIIKEAA 372
Query: 45 AKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAA 85
AK +G S A Y S+NC++ SL +VDYKV++HQQR KLAA
Sbjct: 373 AKTDGFSGREIAKLMASVQAAVYGSDNCILDASLFREVVDYKVAEHQQRIKLAA 426
>gi|357495829|ref|XP_003618203.1| ATPase family AAA domain-containing protein [Medicago truncatula]
gi|355493218|gb|AES74421.1| ATPase family AAA domain-containing protein [Medicago truncatula]
Length = 647
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 61/114 (53%), Gaps = 39/114 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYTA--------------------------DDTLMEAA 44
E+LEFPLPG+EE +KLLKLYLDKY A DD + EAA
Sbjct: 530 EVLEFPLPGEEERYKLLKLYLDKYIAQAGSRQSGLSSLFKANPQKIEIKGLSDDIIKEAA 589
Query: 45 AKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAA 85
AK +G S A Y S+NC++ SL +VDYKV++HQQR KLAA
Sbjct: 590 AKTDGFSGREIAKLMASVQAAVYGSDNCILDASLFREVVDYKVAEHQQRIKLAA 643
>gi|357474281|ref|XP_003607425.1| ATPase family AAA domain-containing protein [Medicago truncatula]
gi|355508480|gb|AES89622.1| ATPase family AAA domain-containing protein [Medicago truncatula]
Length = 613
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 60/114 (52%), Gaps = 40/114 (35%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYTA---------------------------DDTLMEA 43
E+LEFPLPG++E +KLLKLYLDKY A DD + EA
Sbjct: 493 EVLEFPLPGEDERYKLLKLYLDKYIAQAGSRKPGLVQRLLKGNPQKIEIKGMTDDIIKEA 552
Query: 44 AAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLA 84
AA EG S A Y S++CV+ SL ++DYKV++HQQRRKLA
Sbjct: 553 AANTEGFSGREIAKLMASVQAAVYGSKDCVLDQSLFREVIDYKVAEHQQRRKLA 606
>gi|224061575|ref|XP_002300548.1| predicted protein [Populus trichocarpa]
gi|222847806|gb|EEE85353.1| predicted protein [Populus trichocarpa]
Length = 651
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 49/115 (42%), Positives = 58/115 (50%), Gaps = 40/115 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYTA---------------------------DDTLMEA 43
E+LEFPLP EE FKLLKLYLDKY A DD L EA
Sbjct: 530 EVLEFPLPQTEERFKLLKLYLDKYIAQAGSRKSGWLQNLFKRQPQKIEIKGLTDDILKEA 589
Query: 44 AAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAA 85
A + EG S A Y S+NCV+ +L +VDYKV++HQQR KLA+
Sbjct: 590 AERTEGFSGREIAKLMASVQAAVYGSQNCVLDSALFREVVDYKVAEHQQRSKLAS 644
>gi|6714430|gb|AAF26118.1|AC012328_21 putative 26S proteosome regulatory subunit [Arabidopsis thaliana]
Length = 639
Score = 77.8 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 49/116 (42%), Positives = 60/116 (51%), Gaps = 40/116 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYTA---------------------------DDTLMEA 43
E+LEFPLPG+EE FKLL LYL+KY A ++ L EA
Sbjct: 521 EVLEFPLPGEEERFKLLNLYLEKYIAEAGPSKPGLFDRLFKKEQQKIEIKGVTEELLKEA 580
Query: 44 AAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAAI 86
AAK EG S A Y SE+CV+ L +VDYKV++HQQRRKLA +
Sbjct: 581 AAKTEGFSGREIAKLMASVQAAVYGSEDCVLDSMLFREVVDYKVAEHQQRRKLAGV 636
>gi|194695024|gb|ACF81596.1| unknown [Zea mays]
Length = 243
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 59/115 (51%), Gaps = 40/115 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKY---------------------------TADDTLMEA 43
E+LEFPLPG++E FKLLKLYLDKY DD + EA
Sbjct: 122 EVLEFPLPGEDERFKLLKLYLDKYVIRAGDKREKSWLRFFRRQPQKIVVKGVTDDLIREA 181
Query: 44 AAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAA 85
AAK +G S A Y S++C + P L +VDYKV++HQQRR+LA
Sbjct: 182 AAKTQGFSGREIAKMMASVQAAVYGSKDCELTPGLFREVVDYKVAEHQQRRRLAG 236
>gi|145338044|ref|NP_186956.2| P-loop containing nucleoside triphosphate hydrolase-like protein
[Arabidopsis thaliana]
gi|110741899|dbj|BAE98891.1| putative 26S proteosome regulatory subunit [Arabidopsis thaliana]
gi|332640376|gb|AEE73897.1| P-loop containing nucleoside triphosphate hydrolase-like protein
[Arabidopsis thaliana]
Length = 628
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 49/116 (42%), Positives = 60/116 (51%), Gaps = 40/116 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYTA---------------------------DDTLMEA 43
E+LEFPLPG+EE FKLL LYL+KY A ++ L EA
Sbjct: 510 EVLEFPLPGEEERFKLLNLYLEKYIAEAGPSKPGLFDRLFKKEQQKIEIKGVTEELLKEA 569
Query: 44 AAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAAI 86
AAK EG S A Y SE+CV+ L +VDYKV++HQQRRKLA +
Sbjct: 570 AAKTEGFSGREIAKLMASVQAAVYGSEDCVLDSMLFREVVDYKVAEHQQRRKLAGV 625
>gi|238006186|gb|ACR34128.1| unknown [Zea mays]
gi|413923550|gb|AFW63482.1| AAA domain-containing protein 3, ATPase family [Zea mays]
Length = 647
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 47/115 (40%), Positives = 59/115 (51%), Gaps = 40/115 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKY---------------------------TADDTLMEA 43
E+LEFPLPG++E FKLLKLYLDKY DD + EA
Sbjct: 526 EVLEFPLPGEDERFKLLKLYLDKYVIRAGDKREKSWLRFFRRQPQKIVVKGVTDDLIREA 585
Query: 44 AAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAA 85
AAK +G S A Y S++C + P L +VDYKV++HQQRR+LA
Sbjct: 586 AAKTQGFSGREIAKMMASVQAAVYGSKDCELTPGLFREVVDYKVAEHQQRRRLAG 640
>gi|212722590|ref|NP_001132658.1| uncharacterized protein LOC100194134 [Zea mays]
gi|195648212|gb|ACG43574.1| ATPase family AAA domain-containing protein 3 [Zea mays]
Length = 645
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 47/115 (40%), Positives = 59/115 (51%), Gaps = 40/115 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKY---------------------------TADDTLMEA 43
E+LEFPLPG++E FKLLKLYLDKY DD + EA
Sbjct: 524 EVLEFPLPGEDERFKLLKLYLDKYVIRAGDKREKSWLRFFRRQPQKIVVKGVTDDLIREA 583
Query: 44 AAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAA 85
AAK +G S A Y S++C + P L +VDYKV++HQQRR+LA
Sbjct: 584 AAKTQGFSGREIAKMMASVQAAVYGSKDCELTPGLFREVVDYKVAEHQQRRRLAG 638
>gi|242066300|ref|XP_002454439.1| hypothetical protein SORBIDRAFT_04g030980 [Sorghum bicolor]
gi|241934270|gb|EES07415.1| hypothetical protein SORBIDRAFT_04g030980 [Sorghum bicolor]
Length = 649
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 47/115 (40%), Positives = 59/115 (51%), Gaps = 40/115 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYT---------------------------ADDTLMEA 43
E+LEFPLPG++E FKLLKLYLDKY DD + EA
Sbjct: 528 EVLEFPLPGEDERFKLLKLYLDKYIIKAGDKHEKSWLRFFRRQPQKIEVKGITDDLIREA 587
Query: 44 AAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAA 85
AAK +G S A Y S++C + P L +VDYKV++HQQRR+LA
Sbjct: 588 AAKTQGFSGREIAKMMASVQAAVYGSKDCELTPGLFREVVDYKVAEHQQRRRLAG 642
>gi|125540775|gb|EAY87170.1| hypothetical protein OsI_08571 [Oryza sativa Indica Group]
Length = 640
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/115 (41%), Positives = 58/115 (50%), Gaps = 40/115 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKY---------------------------TADDTLMEA 43
E+LEFPLPG++E KLLKLYLDKY DD + EA
Sbjct: 520 EVLEFPLPGEDERSKLLKLYLDKYIMKAGEKHEKSWLRFFRGQPQKIEVKGVTDDLIREA 579
Query: 44 AAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAA 85
AAK EG S A Y S+ CV+ P L +VDYKV++HQQRR+LA
Sbjct: 580 AAKTEGFSGREIAKLMASVQAAVYGSKECVLTPDLFREVVDYKVAEHQQRRRLAG 634
>gi|9755694|emb|CAC01706.1| putative protein [Arabidopsis thaliana]
Length = 599
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/122 (37%), Positives = 62/122 (50%), Gaps = 40/122 (32%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYTA---------------------------DDTLMEA 43
E LEFPLPG+EE FKLL LYL+KY + +D L EA
Sbjct: 477 ETLEFPLPGEEERFKLLNLYLEKYISKTNLKKPGLLQSLFKKEQQTIEIKGVTEDLLKEA 536
Query: 44 AAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIGGGS 90
AAK +G S A Y S NC++ +L ++DYKV++HQQR+KLA G+
Sbjct: 537 AAKTKGFSGREIAKLMASVQAAVYGSANCLLDANLFREVIDYKVAEHQQRKKLAGTDAGN 596
Query: 91 ER 92
++
Sbjct: 597 KK 598
>gi|357137132|ref|XP_003570155.1| PREDICTED: ATPase family AAA domain-containing protein 3-B-like
[Brachypodium distachyon]
Length = 638
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 48/115 (41%), Positives = 57/115 (49%), Gaps = 40/115 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYT---------------------------ADDTLMEA 43
E+LEFPLPG+EE KLLKLYLDKY DD + EA
Sbjct: 522 EVLEFPLPGEEERCKLLKLYLDKYIVKAGDKQGKGWFRFFRRQPQKIAVKGITDDLIQEA 581
Query: 44 AAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAA 85
AAK +G S A Y S C + PSL +VDYKV++HQQRRK+A
Sbjct: 582 AAKTDGFSGREIAKLMASVQAAVYGSTECELTPSLFREVVDYKVAEHQQRRKIAG 636
>gi|22326858|ref|NP_197195.2| AAA-type ATPase family protein [Arabidopsis thaliana]
gi|19424059|gb|AAL87351.1| unknown protein [Arabidopsis thaliana]
gi|22136966|gb|AAM91712.1| unknown protein [Arabidopsis thaliana]
gi|332004976|gb|AED92359.1| AAA-type ATPase family protein [Arabidopsis thaliana]
Length = 644
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 46/122 (37%), Positives = 62/122 (50%), Gaps = 40/122 (32%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYTA---------------------------DDTLMEA 43
E LEFPLPG+EE FKLL LYL+KY + +D L EA
Sbjct: 522 ETLEFPLPGEEERFKLLNLYLEKYISKTNLKKPGLLQSLFKKEQQTIEIKGVTEDLLKEA 581
Query: 44 AAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIGGGS 90
AAK +G S A Y S NC++ +L ++DYKV++HQQR+KLA G+
Sbjct: 582 AAKTKGFSGREIAKLMASVQAAVYGSANCLLDANLFREVIDYKVAEHQQRKKLAGTDAGN 641
Query: 91 ER 92
++
Sbjct: 642 KK 643
>gi|297807721|ref|XP_002871744.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317581|gb|EFH48003.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 643
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 46/122 (37%), Positives = 62/122 (50%), Gaps = 40/122 (32%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYTA---------------------------DDTLMEA 43
E LEFPLPG+EE FKLL LYL+KY + +D L EA
Sbjct: 522 ETLEFPLPGEEERFKLLNLYLEKYISKANLKKPGLLQSIFKKEQQKIEIKGITEDLLKEA 581
Query: 44 AAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIGGGS 90
AAK +G S A Y S NC++ +L ++DYKV++HQQR+KLA G+
Sbjct: 582 AAKTKGFSGREIAKLMASVQAAVYGSANCLLDANLFREVIDYKVAEHQQRKKLAGADAGN 641
Query: 91 ER 92
++
Sbjct: 642 KK 643
>gi|115448083|ref|NP_001047821.1| Os02g0697600 [Oryza sativa Japonica Group]
gi|41052952|dbj|BAD07862.1| 26S proteosome regulatory subunit-like [Oryza sativa Japonica
Group]
gi|113537352|dbj|BAF09735.1| Os02g0697600 [Oryza sativa Japonica Group]
gi|125583347|gb|EAZ24278.1| hypothetical protein OsJ_08029 [Oryza sativa Japonica Group]
gi|215768413|dbj|BAH00642.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 640
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 47/115 (40%), Positives = 57/115 (49%), Gaps = 40/115 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKY---------------------------TADDTLMEA 43
E+LEFPLPG++E KL KLYLDKY DD + EA
Sbjct: 520 EVLEFPLPGEDERSKLFKLYLDKYIMKAGEKHEKSWLRFFRGQPQKIEVKGVTDDLIREA 579
Query: 44 AAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAA 85
AAK EG S A Y S+ CV+ P L +VDYKV++HQQRR+LA
Sbjct: 580 AAKTEGFSGREIAKLMASVQAAVYGSKECVLTPDLFREVVDYKVAEHQQRRRLAG 634
>gi|297828776|ref|XP_002882270.1| hypothetical protein ARALYDRAFT_340454 [Arabidopsis lyrata subsp.
lyrata]
gi|297328110|gb|EFH58529.1| hypothetical protein ARALYDRAFT_340454 [Arabidopsis lyrata subsp.
lyrata]
Length = 642
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 48/115 (41%), Positives = 59/115 (51%), Gaps = 40/115 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYTA---------------------------DDTLMEA 43
E+LEFPLPG+EE FKLL LYL+KY A ++ L EA
Sbjct: 524 EVLEFPLPGEEERFKLLNLYLEKYIAEAGPKKPSLFDRLFKKEQQKIEIKGVTEELLKEA 583
Query: 44 AAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAA 85
AAK EG S A Y SE+CV+ L +V+YKV++HQQRRKLA
Sbjct: 584 AAKTEGFSGREIAKLMASVQAAVYGSEDCVLDSVLFREVVEYKVAEHQQRRKLAG 638
>gi|224115388|ref|XP_002317020.1| predicted protein [Populus trichocarpa]
gi|222860085|gb|EEE97632.1| predicted protein [Populus trichocarpa]
Length = 592
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 49/115 (42%), Positives = 55/115 (47%), Gaps = 41/115 (35%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYTA----------------------------DDTLME 42
E+LEFPLP E FKLLKLYLDKY A DD L E
Sbjct: 478 EVLEFPLPQTGERFKLLKLYLDKYIAQAGSRKSGGWLQNLFKRQPRKIEIKGLTDDILKE 537
Query: 43 AAAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLA 84
AA K EG S A Y S NCV+ +L +VDYKV++HQQR KLA
Sbjct: 538 AAEKTEGFSGREIAKLMAGVQAAVYGSPNCVLDATLFREVVDYKVAEHQQRSKLA 592
>gi|413938370|gb|AFW72921.1| hypothetical protein ZEAMMB73_349246 [Zea mays]
Length = 644
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 40/115 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYT---------------------------ADDTLMEA 43
E+LEFPLPG++E FKLLKLYLDKY DD + EA
Sbjct: 523 EVLEFPLPGEDERFKLLKLYLDKYIIKAGDKHEKSWLQFFRRQPQKIEVKGITDDLIREA 582
Query: 44 AAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAA 85
A++ +G S A Y S++C + P L +VDYKV++H+QRR+LA
Sbjct: 583 ASRTQGFSGREIAKMMASVQAAVYGSKDCELTPGLFREVVDYKVAEHKQRRRLAG 637
>gi|308080608|ref|NP_001183460.1| uncharacterized protein LOC100501892 [Zea mays]
gi|238011696|gb|ACR36883.1| unknown [Zea mays]
Length = 532
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 40/115 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYT---------------------------ADDTLMEA 43
E+LEFPLPG++E FKLLKLYLDKY DD + EA
Sbjct: 411 EVLEFPLPGEDERFKLLKLYLDKYIIKAGDKHEKSWLQFFRRQPQKIEVKGITDDLIREA 470
Query: 44 AAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAA 85
A++ +G S A Y S++C + P L +VDYKV++H+QRR+LA
Sbjct: 471 ASRTQGFSGREIAKMMASVQAAVYGSKDCELTPGLFREVVDYKVAEHKQRRRLAG 525
>gi|413923614|gb|AFW63546.1| hypothetical protein ZEAMMB73_079138 [Zea mays]
Length = 162
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 39/116 (33%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKY--------------------------TADDTLMEAA 44
E++EFPLPG+EE F+LLKLYL++Y +DD L EAA
Sbjct: 45 EVIEFPLPGEEERFQLLKLYLNQYILKEEGKGSSWSALFKKQQRKIQVNGISDDLLREAA 104
Query: 45 AKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIG 87
KI+G S A Y +C++ P L +VDYKV++H QR KLA+ G
Sbjct: 105 RKIDGFSGREIAKLVASVQAAVYGRPDCILDPQLFSEVVDYKVTEHHQRIKLASEG 160
>gi|413923613|gb|AFW63545.1| hypothetical protein ZEAMMB73_079138 [Zea mays]
Length = 605
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 39/116 (33%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKY--------------------------TADDTLMEAA 44
E++EFPLPG+EE F+LLKLYL++Y +DD L EAA
Sbjct: 488 EVIEFPLPGEEERFQLLKLYLNQYILKEEGKGSSWSALFKKQQRKIQVNGISDDLLREAA 547
Query: 45 AKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIG 87
KI+G S A Y +C++ P L +VDYKV++H QR KLA+ G
Sbjct: 548 RKIDGFSGREIAKLVASVQAAVYGRPDCILDPQLFSEVVDYKVTEHHQRIKLASEG 603
>gi|326492067|dbj|BAJ98258.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 635
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/115 (39%), Positives = 55/115 (47%), Gaps = 40/115 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYT---------------------------ADDTLMEA 43
E+LEFPLPG+EE KLLKLYLDKY D+ + EA
Sbjct: 519 EVLEFPLPGEEERSKLLKLYLDKYIVKAGEKRGKGLFSFFRRQPQKIAVKGITDELIREA 578
Query: 44 AAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAA 85
AAK +G S A Y S C + P L +VDYK ++HQQRRK+A
Sbjct: 579 AAKTDGFSGREIAKLMASVQAAVYGSTECELTPGLFREVVDYKAAEHQQRRKIAG 633
>gi|326510933|dbj|BAJ91814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 340
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 39/114 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYT--------------------------ADDTLMEAA 44
E++EFPLPG+EE F+LLKLYL+ Y DD L +AA
Sbjct: 223 EVIEFPLPGEEERFQLLKLYLNNYMLKEDDKSSPWRTLLKKQPKKIHVQDITDDLLRDAA 282
Query: 45 AKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAA 85
KI+G S A Y S +C+++P L +V+YK+++HQQR KLA+
Sbjct: 283 RKIDGFSGREIAKLMASVQAAVYGSPDCILNPQLFNEVVEYKIAEHQQRMKLAS 336
>gi|326534350|dbj|BAJ89525.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 610
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 39/114 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYT--------------------------ADDTLMEAA 44
E++EFPLPG+EE F+LLKLYL+ Y DD L +AA
Sbjct: 493 EVIEFPLPGEEERFQLLKLYLNNYMLKEDDKSSPWRTLLKKQPKKIHVQDITDDLLRDAA 552
Query: 45 AKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAA 85
KI+G S A Y S +C+++P L +V+YK+++HQQR KLA+
Sbjct: 553 RKIDGFSGREIAKLMASVQAAVYGSPDCILNPQLFNEVVEYKIAEHQQRMKLAS 606
>gi|242066258|ref|XP_002454418.1| hypothetical protein SORBIDRAFT_04g030490 [Sorghum bicolor]
gi|241934249|gb|EES07394.1| hypothetical protein SORBIDRAFT_04g030490 [Sorghum bicolor]
Length = 605
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/116 (37%), Positives = 59/116 (50%), Gaps = 39/116 (33%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKY--------------------------TADDTLMEAA 44
E++EFPLPG+EE F+LLKLYL++Y +DD L +AA
Sbjct: 488 EVIEFPLPGEEERFQLLKLYLNQYILKEEGKGSSWGALFKKQQRKIQVNGISDDLLRKAA 547
Query: 45 AKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIG 87
KI+G S A Y +C++ P L +VDYKV++H QR KLA+ G
Sbjct: 548 RKIDGFSGREIAKLVASVQAAVYGRPDCILDPQLFSEVVDYKVTEHHQRIKLASEG 603
>gi|255561118|ref|XP_002521571.1| Protein MSP1, putative [Ricinus communis]
gi|223539249|gb|EEF40842.1| Protein MSP1, putative [Ricinus communis]
Length = 626
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/116 (37%), Positives = 55/116 (47%), Gaps = 39/116 (33%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKY--------------------------TADDTLMEAA 44
E++EFPLPG+EE FKLL LYL KY ++D + EAA
Sbjct: 507 EVIEFPLPGEEERFKLLNLYLSKYLSHEDDNGSDWGLFVKKKPQKITMKDISEDVICEAA 566
Query: 45 AKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIG 87
K EG S A Y +CV+ L +VDYKV++H QR KLAA G
Sbjct: 567 KKTEGFSGREIAKLMAGVQAAVYGRPDCVLDSQLFREVVDYKVAEHHQRIKLAAEG 622
>gi|19387258|gb|AAL87170.1|AF480496_24 putative AAA-type ATPase [Oryza sativa Japonica Group]
Length = 587
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/114 (36%), Positives = 56/114 (49%), Gaps = 39/114 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYT--------------------------ADDTLMEAA 44
E++EFPLPG+EE F+LL+LYL+ Y +DD L EAA
Sbjct: 470 EVIEFPLPGEEERFQLLRLYLNHYMLKEDGKNSFWDSLLKKQRQKIQVKDISDDLLREAA 529
Query: 45 AKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAA 85
KI G S A Y +CV+ P L +V+YKV++H QR KLA+
Sbjct: 530 RKINGFSGREIAKLMASVQAAVYGRPDCVLDPQLLMEVVEYKVAEHHQRIKLAS 583
>gi|115448183|ref|NP_001047871.1| Os02g0706500 [Oryza sativa Japonica Group]
gi|41053105|dbj|BAD08048.1| AAA-type ATPase-like [Oryza sativa Japonica Group]
gi|41053150|dbj|BAD08092.1| AAA-type ATPase-like [Oryza sativa Japonica Group]
gi|113537402|dbj|BAF09785.1| Os02g0706500 [Oryza sativa Japonica Group]
gi|215706430|dbj|BAG93286.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623523|gb|EEE57655.1| hypothetical protein OsJ_08089 [Oryza sativa Japonica Group]
Length = 616
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/114 (36%), Positives = 56/114 (49%), Gaps = 39/114 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYT--------------------------ADDTLMEAA 44
E++EFPLPG+EE F+LL+LYL+ Y +DD L EAA
Sbjct: 499 EVIEFPLPGEEERFQLLRLYLNHYMLKEDGKNSFWDSLLKKQRQKIQVKDISDDLLREAA 558
Query: 45 AKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAA 85
KI G S A Y +CV+ P L +V+YKV++H QR KLA+
Sbjct: 559 RKINGFSGREIAKLMASVQAAVYGRPDCVLDPQLLMEVVEYKVAEHHQRIKLAS 612
>gi|218191432|gb|EEC73859.1| hypothetical protein OsI_08625 [Oryza sativa Indica Group]
Length = 616
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/114 (36%), Positives = 56/114 (49%), Gaps = 39/114 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYT--------------------------ADDTLMEAA 44
E++EFPLPG+EE F+LL+LYL+ Y +DD L EAA
Sbjct: 499 EVIEFPLPGEEERFQLLRLYLNHYMLKEDGKNSFWDSLLKKQRQKIQVKDISDDLLREAA 558
Query: 45 AKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAA 85
KI G S A Y +CV+ P L +V+YKV++H QR KLA+
Sbjct: 559 RKINGFSGREIAKLMASVQAAVYGRPDCVLDPQLLMEVVEYKVAEHHQRIKLAS 612
>gi|413938477|gb|AFW73028.1| putative AAA-type ATPase [Zea mays]
gi|413938482|gb|AFW73033.1| putative AAA-type ATPase [Zea mays]
Length = 601
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 55/115 (47%), Gaps = 38/115 (33%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKY-------------------------TADDTLMEAAA 45
E++EFPLPG+EE F+LLKLYL +Y +DD L EAA
Sbjct: 485 EVIEFPLPGEEERFQLLKLYLHQYILKEEGKGSWGALFKKQQRKIQVNGISDDLLREAAR 544
Query: 46 KIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIG 87
+I+G S A Y C + P L +VDYKV++H QR LA+ G
Sbjct: 545 RIDGFSGREIAKLVASVQAAVYGRPGCTLDPQLFSEVVDYKVTEHHQRIMLASEG 599
>gi|357137214|ref|XP_003570196.1| PREDICTED: ATPase family AAA domain-containing protein 3-like
[Brachypodium distachyon]
Length = 615
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 39/114 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYT--------------------------ADDTLMEAA 44
E++EFPLPG+EE F+LLKLYL++Y DD L +AA
Sbjct: 498 EVIEFPLPGEEERFQLLKLYLNRYMIKEDGKRSPWSLLLNKQPQKIHVRDITDDLLKDAA 557
Query: 45 AKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAA 85
KI G S A Y +C++ P L +V+YKV++H QR KL++
Sbjct: 558 RKINGFSGREIAKLMASVQAAVYGRPDCILDPQLFNEVVEYKVAEHHQRIKLSS 611
>gi|168032696|ref|XP_001768854.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679966|gb|EDQ66407.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 594
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/112 (36%), Positives = 54/112 (48%), Gaps = 39/112 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYTA--------------------------DDTLMEAA 44
E+LEFPLPG+EE KLLKLYL++Y A ++ L EAA
Sbjct: 470 EVLEFPLPGEEERLKLLKLYLERYIARAGTQSRGWRSWLRGRQDKIEVKGITEEVLREAA 529
Query: 45 AKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKL 83
K EG S A Y S+ V+ ++ +VDYKV++H QRR L
Sbjct: 530 QKTEGFSGREIAKLMASVQGAVYGSQLSVLDANMFREVVDYKVAEHNQRRVL 581
>gi|449451537|ref|XP_004143518.1| PREDICTED: ATPase family AAA domain-containing protein 3-like
[Cucumis sativus]
gi|449504882|ref|XP_004162321.1| PREDICTED: ATPase family AAA domain-containing protein 3-like
[Cucumis sativus]
Length = 626
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/117 (35%), Positives = 52/117 (44%), Gaps = 39/117 (33%)
Query: 11 ELLEFPLPGKEECF--------------------------KLLKLYLDKYTADDTLMEAA 44
E++EFPLPG+EE F K + + K DD L EAA
Sbjct: 507 EVIEFPLPGEEERFKLLKLYLNKYLSNQNEATSKHVFSLKKSPQQIIIKDITDDVLQEAA 566
Query: 45 AKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIGG 88
K EG S A Y +CV+ +L IVDYKV++H QR KLAA GG
Sbjct: 567 RKTEGFSGREIAKLMASVQAAVYGRPDCVLDSTLLREIVDYKVTEHHQRLKLAAEGG 623
>gi|302766209|ref|XP_002966525.1| hypothetical protein SELMODRAFT_168159 [Selaginella moellendorffii]
gi|300165945|gb|EFJ32552.1| hypothetical protein SELMODRAFT_168159 [Selaginella moellendorffii]
Length = 584
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 54/117 (46%), Gaps = 38/117 (32%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKY-------------------------TADDTLMEAAA 45
E+LEFPLPG EE KL++LYLDKY +DD + EAA
Sbjct: 467 EILEFPLPGLEEREKLIRLYLDKYIVQAGEGAKGWKQYVAQQHKIEMKDVSDDVIREAAE 526
Query: 46 KIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIGGG 89
EG S A Y S++ V+ +V KV +HQ+R++LA GGG
Sbjct: 527 MTEGFSGREIAKLLASVQGAVYGSKDSVLTAEEFRNVVACKVLEHQKRKELADSGGG 583
>gi|302801223|ref|XP_002982368.1| hypothetical protein SELMODRAFT_116373 [Selaginella moellendorffii]
gi|300149960|gb|EFJ16613.1| hypothetical protein SELMODRAFT_116373 [Selaginella moellendorffii]
Length = 583
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 52/116 (44%), Gaps = 38/116 (32%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKY-------------------------TADDTLMEAAA 45
E+LEFPLPG EE KL++LYLDKY DD + EAA
Sbjct: 467 EILEFPLPGLEEREKLIRLYLDKYIVQAGEGAKGWKQYVAQQHKIEMKDVTDDVIREAAE 526
Query: 46 KIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIGG 88
EG S A Y S++ V+ +V KV +HQ+R++LA GG
Sbjct: 527 MTEGFSGREIAKLLASVQGAVYGSKDSVLTAEEFRNVVACKVLEHQKRKELADSGG 582
>gi|297735144|emb|CBI17506.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 42/117 (35%), Positives = 52/117 (44%), Gaps = 39/117 (33%)
Query: 11 ELLEFPLPGKEECFK----------------------LLKLYLDKYT----ADDTLMEAA 44
E++EFPLPG+EE FK L K K T ++D + EAA
Sbjct: 530 EVIEFPLPGEEERFKLLKLYLDKYLSDEGQSTSKWNPLSKSKPQKVTIKDVSEDVIREAA 589
Query: 45 AKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIGG 88
K EG S A Y +CV+ L IVDYKV++H QR KL A GG
Sbjct: 590 RKTEGFSGREIAKLMAGIQAAVYGRPDCVLDSQLFMEIVDYKVAEHHQRLKLVAEGG 646
>gi|225430736|ref|XP_002266534.1| PREDICTED: ATPase family AAA domain-containing protein 3-A [Vitis
vinifera]
Length = 627
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 42/117 (35%), Positives = 52/117 (44%), Gaps = 39/117 (33%)
Query: 11 ELLEFPLPGKEECFK----------------------LLKLYLDKYT----ADDTLMEAA 44
E++EFPLPG+EE FK L K K T ++D + EAA
Sbjct: 508 EVIEFPLPGEEERFKLLKLYLDKYLSDEGQSTSKWNPLSKSKPQKVTIKDVSEDVIREAA 567
Query: 45 AKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIGG 88
K EG S A Y +CV+ L IVDYKV++H QR KL A GG
Sbjct: 568 RKTEGFSGREIAKLMAGIQAAVYGRPDCVLDSQLFMEIVDYKVAEHHQRLKLVAEGG 624
>gi|18398708|ref|NP_565435.1| AAA-type ATPase-like protein [Arabidopsis thaliana]
gi|15450828|gb|AAK96685.1| putative AAA-type ATPase [Arabidopsis thaliana]
gi|20197813|gb|AAD15504.2| putative AAA-type ATPase [Arabidopsis thaliana]
gi|20259834|gb|AAM13264.1| putative AAA-type ATPase [Arabidopsis thaliana]
gi|330251663|gb|AEC06757.1| AAA-type ATPase-like protein [Arabidopsis thaliana]
Length = 636
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 51/126 (40%), Gaps = 46/126 (36%)
Query: 11 ELLEFPLPGKEECF---------------------------------KLLKLYLDKYTAD 37
E++EFPLPG+EE F K K+ ++ D
Sbjct: 509 EVIEFPLPGEEERFKLLKLYLNKYLMGDDKKGEKDSNLKWSNLFKKKKSQKITIEGDLTD 568
Query: 38 DTLMEAAAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLA 84
+ EAA K EG S A Y ++CV+ L IVDYK+ +H QR +LA
Sbjct: 569 QVIKEAAKKTEGFSGREIAKLVAGVQAAVYGRQDCVLDSQLFEEIVDYKIEEHHQRIRLA 628
Query: 85 AIGGGS 90
GG S
Sbjct: 629 TEGGQS 634
>gi|356538198|ref|XP_003537591.1| PREDICTED: ATPase family AAA domain-containing protein 3-like
[Glycine max]
Length = 631
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 50/116 (43%), Gaps = 38/116 (32%)
Query: 11 ELLEFPLPGKEE-------------CFK--------LLKLYLDKYT----ADDTLMEAAA 45
E++EFPLPG+EE C LK K T ++D EAA
Sbjct: 511 EVIEFPLPGEEERLKLLKLYLNKYLCDDNNGSKGGFFLKKQPQKITIKDLSEDVFREAAK 570
Query: 46 KIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIGG 88
K EG S A Y +C++ L IVDYKV +H QR KLAA GG
Sbjct: 571 KTEGFSGREIAKLMASVQAAVYGRPDCILDAQLFREIVDYKVVEHHQRLKLAAEGG 626
>gi|357483481|ref|XP_003612027.1| ATPase family AAA domain-containing protein [Medicago truncatula]
gi|355513362|gb|AES94985.1| ATPase family AAA domain-containing protein [Medicago truncatula]
Length = 630
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 52/116 (44%), Gaps = 38/116 (32%)
Query: 11 ELLEFPLPGKEECFKLLK-----------------LYLDKYT--------ADDTLMEAAA 45
E++EFPLPG+EE KLL L++ K ++D L EAA
Sbjct: 512 EVIEFPLPGEEERLKLLNLYLNKYLCDESNGSKGGLFMKKQPQQITIKDLSEDVLKEAAK 571
Query: 46 KIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIGG 88
K EG S A Y +C + L IVDYKV +H QR KLAA GG
Sbjct: 572 KTEGFSGREIAKLMASVQAAVYGRPDCALDSKLFREIVDYKVVEHHQRLKLAAEGG 627
>gi|297832492|ref|XP_002884128.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297329968|gb|EFH60387.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 633
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 50/126 (39%), Gaps = 46/126 (36%)
Query: 11 ELLEFPLPGKEECF---------------------------------KLLKLYLDKYTAD 37
E++EFPLPG+EE F K K+ ++ D
Sbjct: 506 EVIEFPLPGEEERFKLLKLYLNKYLMGEDKKGEKDSNLKWSNLFKKKKSQKITIEGDLTD 565
Query: 38 DTLMEAAAKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLA 84
+ EAA K EG S A Y +CV+ L IVDYK+ +H QR +LA
Sbjct: 566 QVIKEAAKKTEGFSGREIAKLVAGVQAAVYGRPDCVLDSQLFEEIVDYKIEEHHQRIRLA 625
Query: 85 AIGGGS 90
GG S
Sbjct: 626 TEGGQS 631
>gi|297802292|ref|XP_002869030.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297314866|gb|EFH45289.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 620
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 51/120 (42%), Gaps = 43/120 (35%)
Query: 11 ELLEFPLPGKEECFK-------------------------LLKLYLDKYT-----ADDTL 40
E++EFPLPG+EE FK L K K T D +
Sbjct: 494 EVIEFPLPGEEERFKLLNLYLNKYLKRGDNNKDTKPKWSHLFKKLSQKITVEADLTDKVI 553
Query: 41 MEAAAKIEGIS--------AG-----YESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIG 87
EAA K EG S AG Y E+CV+ L IV+YKV +H QR +LA+ G
Sbjct: 554 SEAAKKTEGFSGREIAKLVAGVQAGVYGREDCVLDSQLFKEIVEYKVEEHHQRLRLASEG 613
>gi|224097014|ref|XP_002310811.1| predicted protein [Populus trichocarpa]
gi|222853714|gb|EEE91261.1| predicted protein [Populus trichocarpa]
Length = 633
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 56/118 (47%), Gaps = 41/118 (34%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYT--------------------------ADDTLMEAA 44
E++EFPLPG+EE F+LL LYL Y ++D + EAA
Sbjct: 512 EVIEFPLPGEEERFELLNLYLRNYLSNEGDSGSSKGSLFKKKTQKITIKDISEDVIREAA 571
Query: 45 AKIEGIS--------AGYESE-------NCVIHPSLSYVIVDYKVSKHQQRRKLAAIG 87
K EG S AG ++ +CV+ L IVDYKV++H QR KLAA G
Sbjct: 572 KKTEGFSGREIAKLMAGVQAAVYGRPDCDCVLDSQLFREIVDYKVAEHHQRLKLAAEG 629
>gi|356495406|ref|XP_003516569.1| PREDICTED: ATPase family AAA domain-containing protein 3-like
[Glycine max]
Length = 626
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 48/115 (41%), Gaps = 38/115 (33%)
Query: 11 ELLEFPLPGKEECFK---------------------LLKLYLDKYT----ADDTLMEAAA 45
E++EFPLPG+EE K LK K + ++D EAA
Sbjct: 510 EVIEFPLPGEEERLKLLKLYLNKYLCDDNNGSKGGFFLKKQPQKISIKDLSEDVFREAAT 569
Query: 46 KIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIG 87
K EG S A Y +C++ L +DYKV +H QR KLAA G
Sbjct: 570 KTEGFSGREIAKLMASVQAAVYGRPDCILDSQLFRESIDYKVVEHHQRLKLAADG 624
>gi|334187222|ref|NP_195376.2| AAA-type ATPase family protein [Arabidopsis thaliana]
gi|332661274|gb|AEE86674.1| AAA-type ATPase family protein [Arabidopsis thaliana]
Length = 632
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 51/120 (42%), Gaps = 43/120 (35%)
Query: 11 ELLEFPLPGKEE----------------------------CFKLL--KLYLDKYTADDTL 40
E++EFPLPG+EE FK L K+ +++ D +
Sbjct: 506 EVIEFPLPGEEERFKLLNLYLNKYLKMGDNNEDTKPKWSHLFKKLSQKITVEEDLTDKVI 565
Query: 41 MEAAAKIEGIS--------AG-----YESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIG 87
EAA K EG S AG Y +CV+ L IV+YKV +H +R LA+ G
Sbjct: 566 SEAAKKTEGFSGREIAKLVAGVQAGVYGRADCVLDSQLFKEIVEYKVEEHHRRHMLASEG 625
>gi|4006905|emb|CAB16835.1| ATPase-like protein [Arabidopsis thaliana]
gi|7270606|emb|CAB80324.1| ATPase-like protein [Arabidopsis thaliana]
Length = 620
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 51/120 (42%), Gaps = 43/120 (35%)
Query: 11 ELLEFPLPGKEE----------------------------CFKLL--KLYLDKYTADDTL 40
E++EFPLPG+EE FK L K+ +++ D +
Sbjct: 494 EVIEFPLPGEEERFKLLNLYLNKYLKMGDNNEDTKPKWSHLFKKLSQKITVEEDLTDKVI 553
Query: 41 MEAAAKIEGIS--------AG-----YESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIG 87
EAA K EG S AG Y +CV+ L IV+YKV +H +R LA+ G
Sbjct: 554 SEAAKKTEGFSGREIAKLVAGVQAGVYGRADCVLDSQLFKEIVEYKVEEHHRRHMLASEG 613
>gi|168034138|ref|XP_001769570.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679112|gb|EDQ65563.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 643
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 46/114 (40%), Gaps = 39/114 (34%)
Query: 11 ELLEFPLPGKEE----------------------CFKLLKLYLDKY----TADDTLMEAA 44
E LEFPLPG+EE L+ DK ++ L EAA
Sbjct: 519 EALEFPLPGEEERLKLLKLYLEKYIAQAGNFSRGWRSWLRGQQDKIEIKGITEEVLREAA 578
Query: 45 AKIEGIS-------------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAA 85
K EG S A Y S++ V+ +VDYKV++H+QRR L
Sbjct: 579 EKTEGFSGREIAKLMASVQGAVYGSQSSVLDADTFREVVDYKVAEHRQRRVLTG 632
>gi|45387821|ref|NP_991266.1| ATPase family AAA domain-containing protein 3 [Danio rerio]
gi|41944868|gb|AAH65962.1| ATPase family, AAA domain containing 3B [Danio rerio]
Length = 621
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 30/100 (30%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYTAD-----------------DTLMEAAAKIEGIS-- 51
E++ F LPG EE +L++LY D+Y + E A ++EG+S
Sbjct: 463 EIVNFMLPGPEERERLVRLYFDRYVLEPATGGRQRLKLAQFDYGQKCSEIAKRVEGMSGR 522
Query: 52 -----------AGYESENCVIHPSLSYVIVDYKVSKHQQR 80
A Y SE+ V+ ++ VD V +H+Q+
Sbjct: 523 EISKLGVAWQAAAYSSEDGVLSEAMIDARVDAAVRQHRQK 562
>gi|410919687|ref|XP_003973315.1| PREDICTED: ATPase family AAA domain-containing protein 3-like
[Takifugu rubripes]
Length = 672
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 30/100 (30%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYTAD-----------------DTLMEAAAKIEGIS-- 51
E++ F LPG EE +L++LY DKY + E A + EG+S
Sbjct: 465 EIVNFALPGPEERERLVRLYFDKYVLEPATGGRQRMKLAQFDYGKKCSEIAKRTEGMSGR 524
Query: 52 -----------AGYESENCVIHPSLSYVIVDYKVSKHQQR 80
A Y SE+ V+ ++ VD V +H Q+
Sbjct: 525 EISKLGVAWQAAAYSSEDGVLTEAMIDARVDDAVKQHHQK 564
>gi|237751300|ref|ZP_04581780.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Helicobacter bilis ATCC 43879]
gi|229372666|gb|EEO23057.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase
[Helicobacter bilis ATCC 43879]
Length = 566
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 39 TLMEAAAKIEGISAGYESENCVIHPSLSYVIVDYKVS-KHQQRRKLAAIGGGSERFRNDI 97
TL A A+++ +S+N H S++ + DY KH Q RK+A +G ERF D
Sbjct: 216 TLNPAPAQMD---KNLDSKNSATHSSINMQLFDYHNGIKHLQERKIACVGNAQERFLEDS 272
Query: 98 FILIR 102
++R
Sbjct: 273 LRIMR 277
>gi|47229652|emb|CAG06848.1| unnamed protein product [Tetraodon nigroviridis]
Length = 600
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 30/100 (30%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYTAD-----------------DTLMEAAAKIEGIS-- 51
E++ F LPG EE +L++LY DKY + E A + EG+S
Sbjct: 482 EIVNFALPGPEERERLVRLYFDKYVLEPATGGRQRMKLAQFDYGKKCSEIAKRTEGMSGR 541
Query: 52 -----------AGYESENCVIHPSLSYVIVDYKVSKHQQR 80
A Y SE+ V+ ++ VD V +H Q+
Sbjct: 542 EISKLGVAWQAAAYSSEDGVLTEAMIDARVDDAVKQHLQK 581
>gi|301103314|ref|XP_002900743.1| ATPase family AAA domain-containing protein 3A [Phytophthora
infestans T30-4]
gi|262101498|gb|EEY59550.1| ATPase family AAA domain-containing protein 3A [Phytophthora
infestans T30-4]
Length = 584
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 29/114 (25%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKY----------------TADDTLMEAAAKIEGIS--- 51
E++EF LPG +E ++LK Y D Y D + AA+I+G S
Sbjct: 464 EMVEFRLPGFDERVRMLKQYFDDYIRAPKNSRAKKIYVEGIEDSDFEDLAARIDGFSGRE 523
Query: 52 ----------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIGGGSERFRN 95
A Y S V + ++++ ++ H+Q+ G SE+ N
Sbjct: 524 LSKLVIAFQAAAYGSPTSVFDKEMMMQVLEHHLTAHKQKEAWKEYVGPSEKRDN 577
>gi|348507529|ref|XP_003441308.1| PREDICTED: ATPase family AAA domain-containing protein 3-A-like
[Oreochromis niloticus]
Length = 665
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 30/100 (30%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKYTAD-----------------DTLMEAAAKIEGIS-- 51
E++ F LPG EE +L++LY DKY + E A + EG+S
Sbjct: 466 EIVNFALPGLEERERLVRLYFDKYVLEPATGGRQRLKLAQFDYGKKCSEIAKRTEGMSGR 525
Query: 52 -----------AGYESENCVIHPSLSYVIVDYKVSKHQQR 80
A Y SE+ V+ ++ VD V +H Q+
Sbjct: 526 EISKLGVAWQAAAYSSEDGVLTEAMIDARVDDAVKQHLQK 565
>gi|328696750|ref|XP_003240115.1| PREDICTED: ATPase family AAA domain-containing protein 3-like
[Acyrthosiphon pisum]
Length = 581
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 15/24 (62%), Positives = 19/24 (79%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKY 34
E++EF LPGKEE +L+ LY DKY
Sbjct: 461 EMVEFGLPGKEERERLMMLYFDKY 484
>gi|189199746|ref|XP_001936210.1| sorting nexin mvp1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187983309|gb|EDU48797.1| sorting nexin mvp1 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 714
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 15 FPLPGKEECFKLLKLYLDKYTADDTLMEAAAKIEGISAGYESENCVIHPSLSYVIVDYKV 74
FP P K + L+K L D+ ++A + + AG + NCV + ++ D +
Sbjct: 47 FPTPKKADREALVKSLLPAGDVPDSYIDAFDAL--LEAGNGAGNCVSVDGVKKLLADSDI 104
Query: 75 SKHQQRRKLAAI---GGGSERFRNDIFILIRHFSLVG 108
H Q + L + GG +E RN+ ++ F+L+G
Sbjct: 105 PAHAQNKILETVLPPGGAAELGRNEFNVV---FALIG 138
>gi|348686645|gb|EGZ26460.1| hypothetical protein PHYSODRAFT_556010 [Phytophthora sojae]
Length = 587
Score = 34.3 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 29/110 (26%)
Query: 11 ELLEFPLPGKEECFKLLKLYLDKY----------------TADDTLMEAAAKIEGIS--- 51
E++EF LPG +E ++LK Y D Y D + AA+IEG S
Sbjct: 467 EMVEFRLPGFDERVRMLKQYFDDYIRAPKNSRAKKIYVEGIEDSDFEDLAARIEGFSGRE 526
Query: 52 ----------AGYESENCVIHPSLSYVIVDYKVSKHQQRRKLAAIGGGSE 91
A Y S V + ++++ ++ H Q+ G +E
Sbjct: 527 LSKLVIAFQAAAYGSPTSVFDKEMMTKVLEHHLTAHTQKEAWKEYVGPNE 576
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.140 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,617,786,840
Number of Sequences: 23463169
Number of extensions: 55530116
Number of successful extensions: 123549
Number of sequences better than 100.0: 80
Number of HSP's better than 100.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 123372
Number of HSP's gapped (non-prelim): 97
length of query: 108
length of database: 8,064,228,071
effective HSP length: 76
effective length of query: 32
effective length of database: 6,281,027,227
effective search space: 200992871264
effective search space used: 200992871264
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)