Query 037515
Match_columns 263
No_of_seqs 193 out of 1133
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 13:03:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037515.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037515hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 100.0 4.4E-51 9.6E-56 374.1 22.9 232 2-244 105-346 (351)
2 cd01837 SGNH_plant_lipase_like 100.0 4.6E-50 1E-54 362.9 22.9 230 2-244 76-315 (315)
3 cd01847 Triacylglycerol_lipase 100.0 2.5E-43 5.5E-48 314.0 18.1 208 2-242 59-279 (281)
4 PRK15381 pathogenicity island 100.0 3.5E-40 7.5E-45 305.1 19.9 191 2-242 197-399 (408)
5 cd01846 fatty_acyltransferase_ 100.0 6.2E-39 1.3E-43 283.5 19.7 203 2-242 56-269 (270)
6 COG3240 Phospholipase/lecithin 99.9 1.9E-26 4.1E-31 207.0 11.3 198 18-244 131-333 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 99.8 1.7E-19 3.7E-24 153.8 8.3 148 49-240 81-234 (234)
8 cd01834 SGNH_hydrolase_like_2 98.7 3.1E-07 6.7E-12 76.0 12.0 128 52-243 63-191 (191)
9 cd01829 SGNH_hydrolase_peri2 S 98.7 3.2E-07 7E-12 77.0 11.9 137 52-243 61-197 (200)
10 cd00229 SGNH_hydrolase SGNH_hy 98.7 4.3E-07 9.3E-12 72.8 12.1 122 49-242 64-186 (187)
11 cd01833 XynB_like SGNH_hydrola 98.7 4.6E-07 9.9E-12 73.2 12.1 116 50-243 40-156 (157)
12 cd01841 NnaC_like NnaC (CMP-Ne 98.6 5.2E-07 1.1E-11 74.1 11.3 119 52-242 53-172 (174)
13 cd01836 FeeA_FeeB_like SGNH_hy 98.6 1E-06 2.2E-11 73.5 11.6 121 50-243 67-188 (191)
14 cd01828 sialate_O-acetylestera 98.5 1.2E-06 2.7E-11 71.6 10.5 117 51-243 49-167 (169)
15 cd01830 XynE_like SGNH_hydrola 98.5 1.3E-06 2.8E-11 74.0 10.6 56 52-116 76-131 (204)
16 cd01839 SGNH_arylesterase_like 98.5 1.8E-06 3.8E-11 73.2 10.6 119 50-242 79-203 (208)
17 PF13472 Lipase_GDSL_2: GDSL-l 98.4 3.1E-06 6.6E-11 68.3 10.2 119 50-236 61-179 (179)
18 cd01838 Isoamyl_acetate_hydrol 98.4 3.3E-06 7.1E-11 70.3 10.5 133 50-242 63-197 (199)
19 cd01823 SEST_like SEST_like. A 98.4 9.4E-06 2E-10 71.0 13.9 159 51-242 81-258 (259)
20 cd04506 SGNH_hydrolase_YpmR_li 98.4 5E-06 1.1E-10 70.1 11.6 135 50-242 68-203 (204)
21 cd01824 Phospholipase_B_like P 98.4 1.2E-05 2.6E-10 72.2 14.3 147 52-243 121-282 (288)
22 cd01820 PAF_acetylesterase_lik 98.3 7.1E-06 1.5E-10 70.0 11.6 119 51-243 90-209 (214)
23 cd04501 SGNH_hydrolase_like_4 98.3 7.2E-06 1.6E-10 67.8 11.2 122 51-242 60-181 (183)
24 cd01821 Rhamnogalacturan_acety 98.3 3.9E-06 8.4E-11 70.5 8.5 130 51-242 66-196 (198)
25 cd01826 acyloxyacyl_hydrolase_ 98.3 1.2E-05 2.5E-10 72.1 11.5 55 52-115 124-180 (305)
26 cd01832 SGNH_hydrolase_like_1 98.2 2.4E-05 5.1E-10 64.7 11.8 117 50-242 67-184 (185)
27 cd04502 SGNH_hydrolase_like_7 98.2 2.7E-05 5.7E-10 63.8 11.9 118 51-242 51-169 (171)
28 cd01835 SGNH_hydrolase_like_3 98.1 2.3E-05 5E-10 65.4 9.6 123 50-242 69-191 (193)
29 cd01825 SGNH_hydrolase_peri1 S 98.0 2.6E-05 5.5E-10 64.5 8.8 127 51-243 57-184 (189)
30 cd01844 SGNH_hydrolase_like_6 98.0 0.0001 2.2E-09 60.9 12.3 118 50-242 57-175 (177)
31 PRK10528 multifunctional acyl- 98.0 2.8E-05 6E-10 65.3 8.9 44 50-109 71-114 (191)
32 cd01827 sialate_O-acetylestera 98.0 8.2E-05 1.8E-09 61.7 11.3 118 51-243 68-186 (188)
33 cd01840 SGNH_hydrolase_yrhL_li 97.9 0.0003 6.4E-09 56.7 11.6 23 220-242 126-148 (150)
34 cd01822 Lysophospholipase_L1_l 97.9 0.00011 2.5E-09 60.0 9.3 24 220-243 152-175 (177)
35 cd01831 Endoglucanase_E_like E 97.7 0.00047 1E-08 56.4 11.3 23 221-243 145-167 (169)
36 KOG3035 Isoamyl acetate-hydrol 97.5 0.00044 9.6E-09 58.8 7.4 135 50-242 68-206 (245)
37 COG2755 TesA Lysophospholipase 96.3 0.067 1.4E-06 45.2 11.2 24 221-244 185-208 (216)
38 COG2845 Uncharacterized protei 95.7 0.23 4.9E-06 45.0 11.8 131 50-242 177-315 (354)
39 KOG3670 Phospholipase [Lipid t 95.0 0.91 2E-05 42.2 13.8 76 19-111 160-237 (397)
40 cd01842 SGNH_hydrolase_like_5 87.8 9.7 0.00021 31.8 10.5 20 223-242 161-180 (183)
41 PF08885 GSCFA: GSCFA family; 83.0 12 0.00026 33.0 9.4 80 84-175 146-225 (251)
42 PLN02757 sirohydrochlorine fer 82.1 4.4 9.5E-05 32.9 5.9 54 92-168 60-113 (154)
43 COG3240 Phospholipase/lecithin 74.6 2.7 5.9E-05 38.9 2.8 68 50-123 98-165 (370)
44 PF02633 Creatininase: Creatin 72.7 22 0.00047 30.7 8.0 80 57-173 63-142 (237)
45 cd03416 CbiX_SirB_N Sirohydroc 72.6 9.8 0.00021 28.0 5.1 52 93-167 47-98 (101)
46 PF01903 CbiX: CbiX; InterPro 71.0 3.9 8.4E-05 30.3 2.6 53 93-168 40-92 (105)
47 PRK13384 delta-aminolevulinic 68.2 14 0.0003 33.6 5.8 65 86-168 57-121 (322)
48 cd00384 ALAD_PBGS Porphobilino 66.0 29 0.00062 31.5 7.3 65 86-168 47-111 (314)
49 PF14606 Lipase_GDSL_3: GDSL-l 64.0 2.2 4.9E-05 35.5 0.0 116 50-242 59-175 (178)
50 PF04914 DltD_C: DltD C-termin 62.4 18 0.00039 28.5 4.8 25 218-242 101-125 (130)
51 cd04823 ALAD_PBGS_aspartate_ri 61.5 35 0.00076 31.0 7.1 66 86-168 50-116 (320)
52 cd04824 eu_ALAD_PBGS_cysteine_ 61.4 38 0.00082 30.8 7.2 67 86-168 47-114 (320)
53 PRK09283 delta-aminolevulinic 60.8 21 0.00046 32.5 5.6 65 86-168 55-119 (323)
54 cd03414 CbiX_SirB_C Sirohydroc 59.9 34 0.00074 25.7 6.0 51 92-167 47-97 (117)
55 cd03412 CbiK_N Anaerobic cobal 54.5 52 0.0011 25.5 6.3 52 90-167 56-107 (127)
56 PRK06520 5-methyltetrahydropte 50.6 47 0.001 30.8 6.4 36 80-116 160-195 (368)
57 PF00490 ALAD: Delta-aminolevu 49.5 39 0.00084 30.9 5.3 65 88-168 55-119 (324)
58 PF08029 HisG_C: HisG, C-termi 43.9 21 0.00046 25.3 2.3 21 92-112 52-72 (75)
59 COG0113 HemB Delta-aminolevuli 41.9 54 0.0012 29.7 5.0 69 84-168 55-123 (330)
60 TIGR03455 HisG_C-term ATP phos 41.8 33 0.00071 25.7 3.2 23 90-112 74-96 (100)
61 KOG4079 Putative mitochondrial 40.5 12 0.00027 29.7 0.7 17 101-117 42-58 (169)
62 PRK09121 5-methyltetrahydropte 40.0 78 0.0017 29.0 6.0 55 80-148 146-200 (339)
63 PF02896 PEP-utilizers_C: PEP- 37.8 62 0.0013 29.2 4.9 17 50-66 195-211 (293)
64 COG1903 CbiD Cobalamin biosynt 34.6 3.3E+02 0.0071 25.5 9.0 85 6-113 171-257 (367)
65 COG1031 Uncharacterized Fe-S o 32.1 1.7E+02 0.0036 28.4 6.8 69 89-169 217-285 (560)
66 PF08331 DUF1730: Domain of un 31.3 1.3E+02 0.0028 21.1 4.8 65 102-167 9-77 (78)
67 PRK06233 hypothetical protein; 30.9 74 0.0016 29.6 4.4 35 80-115 161-195 (372)
68 TIGR01091 upp uracil phosphori 30.7 1.6E+02 0.0034 24.9 6.0 24 89-112 135-158 (207)
69 cd03311 CIMS_C_terminal_like C 30.3 1.8E+02 0.0039 26.2 6.8 38 80-118 145-182 (332)
70 PRK13717 conjugal transfer pro 29.7 1.1E+02 0.0024 24.1 4.3 27 133-159 70-96 (128)
71 cd00419 Ferrochelatase_C Ferro 29.6 1.7E+02 0.0038 22.9 5.7 36 93-142 80-115 (135)
72 COG1015 DeoB Phosphopentomutas 29.2 3.4E+02 0.0074 25.5 8.1 95 54-168 239-334 (397)
73 PF06908 DUF1273: Protein of u 28.1 1.5E+02 0.0033 24.6 5.3 60 84-171 23-82 (177)
74 PF07555 NAGidase: beta-N-acet 27.9 2.3E+02 0.005 25.7 6.9 25 86-110 87-111 (306)
75 PF06812 ImpA-rel_N: ImpA-rela 26.9 24 0.00051 23.8 0.2 8 222-229 53-60 (62)
76 COG3581 Uncharacterized protei 26.7 87 0.0019 29.5 3.9 46 98-168 327-372 (420)
77 COG1402 Uncharacterized protei 26.4 89 0.0019 27.5 3.8 26 86-111 86-111 (250)
78 TIGR02744 TrbI_Ftype type-F co 24.5 1.2E+02 0.0026 23.3 3.7 27 133-159 57-83 (112)
79 PRK00129 upp uracil phosphorib 24.3 2.4E+02 0.0052 23.8 6.0 23 90-112 138-160 (209)
80 PRK07807 inosine 5-monophospha 23.2 1.3E+02 0.0027 29.2 4.5 54 90-171 226-279 (479)
81 cd04236 AAK_NAGS-Urea AAK_NAGS 22.9 2.8E+02 0.0061 24.7 6.4 45 50-114 34-78 (271)
82 cd03413 CbiK_C Anaerobic cobal 22.4 98 0.0021 23.1 2.9 18 93-110 45-62 (103)
83 PF06858 NOG1: Nucleolar GTP-b 21.7 1.4E+02 0.0031 20.1 3.2 26 6-34 19-44 (58)
84 CHL00202 argB acetylglutamate 21.6 3.8E+02 0.0083 23.7 7.1 62 23-115 6-67 (284)
85 cd03312 CIMS_N_terminal_like C 21.0 1.5E+02 0.0032 27.5 4.4 30 80-109 172-201 (360)
86 cd03415 CbiX_CbiC Archaeal sir 20.4 1.1E+02 0.0023 23.9 2.9 19 92-110 46-64 (125)
87 PF01717 Meth_synt_2: Cobalami 20.4 1.6E+02 0.0035 26.5 4.5 34 80-114 144-177 (324)
88 KOG0907 Thioredoxin [Posttrans 20.1 1.3E+02 0.0028 22.6 3.2 24 147-170 39-62 (106)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=100.00 E-value=4.4e-51 Score=374.14 Aligned_cols=232 Identities=30% Similarity=0.497 Sum_probs=198.1
Q ss_pred CCccceecccccC-----CcccccHHHHHHHHHHHHHHHHHHhCChhHHHhhccCceEEEEeccchhhhhhcCCCCCCCC
Q 037515 2 QGHRWATIESKIR-----LGVVISLNGQLQNHKTTVSRIASILGDQESATQHLSKCLYTVGFGSNDYINNYLLPQFYPTS 76 (263)
Q Consensus 2 ~~~~~~~~~t~~~-----~~~~~~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~ 76 (263)
+|+||+-..+|.. ...+++|.+||++|+++++++....|.+ ++++.++++||+||||+|||+.+|+... ...
T Consensus 105 ~GvNFA~agag~~~~~~~~~~~~~l~~Qv~~F~~~~~~l~~~~g~~-~~~~~~~~sL~~i~iG~NDy~~~~~~~~--~~~ 181 (351)
T PLN03156 105 TGVCFASAGTGYDNATSDVLSVIPLWKELEYYKEYQTKLRAYLGEE-KANEIISEALYLISIGTNDFLENYYTFP--GRR 181 (351)
T ss_pred ccceeecCCccccCCCccccCccCHHHHHHHHHHHHHHHHHhhChH-HHHHHHhcCeEEEEecchhHHHHhhccc--ccc
Confidence 6888887776642 1135799999999999998887766653 6678899999999999999986554321 112
Q ss_pred CCCChhhhHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCCcchhHhhHHHHHHHHHHHHHHHHHHh
Q 037515 77 RQYPPDQYATVLIQQYSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYINKAIQLFNTNLKTLVDDLNN 156 (263)
Q Consensus 77 ~~~~~~~~~~~~v~~~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~ 156 (263)
...++++|++.+++.+.+.|++||++|||||+|+|+||+||+|..+.....+..+|.+.+|.+++.||++|++++++|++
T Consensus 182 ~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~~~~~~C~~~~n~~~~~~N~~L~~~l~~L~~ 261 (351)
T PLN03156 182 SQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNLMGGSECVEEYNDVALEFNGKLEKLVTKLNK 261 (351)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23457889999999999999999999999999999999999998765422234689999999999999999999999999
Q ss_pred hCCCcEEEEEecchhhhh---c-cCCCcccCCCCCcCcCccCCccCCCCCccccccCCC-CCCCCCCCCeeecCCChhHH
Q 037515 157 QFRDAKFIYINAYDLLFA---D-ASVGIQDDLVTTIIGPCCPVANLPMNNGILTCIPFS-TSCSIRYANIFWDGVHSSET 231 (263)
Q Consensus 157 ~~p~~~i~~~D~y~~~~~---n-~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C~~~~-~~C~~p~~y~fwD~~HPT~~ 231 (263)
++||++|+++|+|+++.+ | ++|||+ ++ +++|||. |.++....|++.. .+|++|++|+|||++|||++
T Consensus 262 ~~pg~~i~~~D~y~~~~~ii~nP~~yGf~---~~--~~aCCg~---g~~~~~~~C~~~~~~~C~~p~~yvfWD~~HPTe~ 333 (351)
T PLN03156 262 ELPGIKLVFSNPYDIFMQIIRNPSAYGFE---VT--SVACCAT---GMFEMGYLCNRNNPFTCSDADKYVFWDSFHPTEK 333 (351)
T ss_pred hCCCCeEEEEehHHHHHHHHhCccccCcc---cC--CccccCC---CCCCCccccCCCCCCccCCccceEEecCCCchHH
Confidence 999999999999999876 7 999999 98 8999998 7788778898755 58999999999999999999
Q ss_pred HHHHHHHHHhhcC
Q 037515 232 VNVITGRRAYMAL 244 (263)
Q Consensus 232 ~h~~ia~~~~~~~ 244 (263)
+|+++|+.++++.
T Consensus 334 a~~~iA~~~~~~l 346 (351)
T PLN03156 334 TNQIIANHVVKTL 346 (351)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999875
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=100.00 E-value=4.6e-50 Score=362.91 Aligned_cols=230 Identities=36% Similarity=0.668 Sum_probs=198.2
Q ss_pred CCccceecccccCC-----cccccHHHHHHHHHHHHHHHHHHhCChhHHHhhccCceEEEEeccchhhhhhcCCCCCCCC
Q 037515 2 QGHRWATIESKIRL-----GVVISLNGQLQNHKTTVSRIASILGDQESATQHLSKCLYTVGFGSNDYINNYLLPQFYPTS 76 (263)
Q Consensus 2 ~~~~~~~~~t~~~~-----~~~~~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~ 76 (263)
.|+||+...++... ..+++|.+||++|+++++++....|.+ ++.+.++++||+||||+|||+..+.... .
T Consensus 76 ~G~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~F~~~~~~~~~~~g~~-~~~~~~~~sL~~i~iG~ND~~~~~~~~~----~ 150 (315)
T cd01837 76 TGVNFASGGAGILDSTGFLGSVISLSVQLEYFKEYKERLRALVGEE-AAADILSKSLFLISIGSNDYLNNYFANP----T 150 (315)
T ss_pred ccceecccCCccccCCcceeeeecHHHHHHHHHHHHHHHHHhhCHH-HHHHHHhCCEEEEEecccccHHHHhcCc----c
Confidence 58899988776531 246899999999999998887777754 6778899999999999999987553321 1
Q ss_pred CCCChhhhHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCCcchhHhhHHHHHHHHHHHHHHHHHHh
Q 037515 77 RQYPPDQYATVLIQQYSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYINKAIQLFNTNLKTLVDDLNN 156 (263)
Q Consensus 77 ~~~~~~~~~~~~v~~~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~ 156 (263)
...+..++++.+++++.++|++||++|||||+|+|+||+||+|..+.....+..+|.+.+|.+++.||++|+++|++|++
T Consensus 151 ~~~~~~~~~~~~v~~i~~~v~~L~~~GAr~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~ 230 (315)
T cd01837 151 RQYEVEAYVPFLVSNISSAIKRLYDLGARKFVVPGLGPLGCLPSQRTLFGGDGGGCLEELNELARLFNAKLKKLLAELRR 230 (315)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHhCCCcEEEecCCCCcCccHHHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 02356789999999999999999999999999999999999999877543344689999999999999999999999999
Q ss_pred hCCCcEEEEEecchhhhh---c-cCCCcccCCCCCcCcCccCCccCCCCCccccccCC-CCCCCCCCCCeeecCCChhHH
Q 037515 157 QFRDAKFIYINAYDLLFA---D-ASVGIQDDLVTTIIGPCCPVANLPMNNGILTCIPF-STSCSIRYANIFWDGVHSSET 231 (263)
Q Consensus 157 ~~p~~~i~~~D~y~~~~~---n-~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C~~~-~~~C~~p~~y~fwD~~HPT~~ 231 (263)
++|+++|+++|+|+++.+ | ++|||+ ++ +++||+. |..+....|... ..+|++|++|+|||++|||++
T Consensus 231 ~~~~~~i~~~D~y~~~~~i~~np~~yGf~---~~--~~aCc~~---g~~~~~~~c~~~~~~~C~~p~~y~fwD~~HpT~~ 302 (315)
T cd01837 231 ELPGAKFVYADIYNALLDLIQNPAKYGFE---NT--LKACCGT---GGPEGGLLCNPCGSTVCPDPSKYVFWDGVHPTEA 302 (315)
T ss_pred cCCCcEEEEEehhHHHHHHHhChhhcCCc---CC--CcCccCC---CCCCcccccCCCCCCcCCCccceEEeCCCChHHH
Confidence 999999999999999865 7 999999 98 9999998 766666778753 678999999999999999999
Q ss_pred HHHHHHHHHhhcC
Q 037515 232 VNVITGRRAYMAL 244 (263)
Q Consensus 232 ~h~~ia~~~~~~~ 244 (263)
+|+++|+.+++|.
T Consensus 303 ~~~~ia~~~~~g~ 315 (315)
T cd01837 303 ANRIIADALLSGP 315 (315)
T ss_pred HHHHHHHHHhcCC
Confidence 9999999999873
No 3
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=100.00 E-value=2.5e-43 Score=314.04 Aligned_cols=208 Identities=21% Similarity=0.268 Sum_probs=170.1
Q ss_pred CCccceecccccCC--------cccccHHHHHHHHHHHHHHHHHHhCChhHHHhhccCceEEEEeccchhhhhhcCCCCC
Q 037515 2 QGHRWATIESKIRL--------GVVISLNGQLQNHKTTVSRIASILGDQESATQHLSKCLYTVGFGSNDYINNYLLPQFY 73 (263)
Q Consensus 2 ~~~~~~~~~t~~~~--------~~~~~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~ 73 (263)
+|+||+...++... +..++|.+||++|++... ..++++||+||+|+|||+..+.... .
T Consensus 59 ~G~NfA~gGa~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~-------------~~~~~sL~~i~iG~ND~~~~~~~~~-~ 124 (281)
T cd01847 59 GGTNYAQGGARVGDTNNGNGAGAVLPSVTTQIANYLAAGG-------------GFDPNALYTVWIGGNDLIAALAALT-T 124 (281)
T ss_pred CCceeeccCccccCCCCccccccCCCCHHHHHHHHHHhcC-------------CCCCCeEEEEecChhHHHHHHhhcc-c
Confidence 68899988776531 135789999999987532 1378999999999999997654321 0
Q ss_pred CCCCCCChhhhHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCCcchhHhhHHHHHHHHHHHHHHHH
Q 037515 74 PTSRQYPPDQYATVLIQQYSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYINKAIQLFNTNLKTLVDD 153 (263)
Q Consensus 74 ~~~~~~~~~~~~~~~v~~~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~ 153 (263)
......++.++++.+++++..+|++||++|||+|+|+|+||+||+|..+... ..|.+.+|.+++.||++|+++|++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~v~~L~~~GAr~ilv~~lpplgc~P~~~~~~----~~~~~~~n~~~~~~N~~L~~~l~~ 200 (281)
T cd01847 125 ATTTQAAAVAAAATAAADLASQVKNLLDAGARYILVPNLPDVSYTPEAAGTP----AAAAALASALSQTYNQTLQSGLNQ 200 (281)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCcccCcchhhcc----chhHHHHHHHHHHHHHHHHHHHHh
Confidence 0111234678999999999999999999999999999999999999887642 368899999999999999999999
Q ss_pred HHhhCCCcEEEEEecchhhhh---c-cCCCcccCCCCCcCcCccCCccCCCCCccccccC-CCCCCCCCCCCeeecCCCh
Q 037515 154 LNNQFRDAKFIYINAYDLLFA---D-ASVGIQDDLVTTIIGPCCPVANLPMNNGILTCIP-FSTSCSIRYANIFWDGVHS 228 (263)
Q Consensus 154 l~~~~p~~~i~~~D~y~~~~~---n-~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C~~-~~~~C~~p~~y~fwD~~HP 228 (263)
|+.+ +|+++|+|+.+.+ | ++|||+ ++ +++||+. |.... |+. ...+|++|++|+|||++||
T Consensus 201 l~~~----~i~~~D~~~~~~~i~~nP~~yGf~---~~--~~~CC~~---~~~~~---~~~~~~~~c~~~~~y~fwD~~Hp 265 (281)
T cd01847 201 LGAN----NIIYVDTATLLKEVVANPAAYGFT---NT--TTPACTS---TSAAG---SGAATLVTAAAQSTYLFADDVHP 265 (281)
T ss_pred ccCC----eEEEEEHHHHHHHHHhChHhcCcc---CC--CccccCC---CCccc---cccccccCCCCccceeeccCCCC
Confidence 8764 8999999999876 7 999999 98 9999997 44332 432 2357999999999999999
Q ss_pred hHHHHHHHHHHHhh
Q 037515 229 SETVNVITGRRAYM 242 (263)
Q Consensus 229 T~~~h~~ia~~~~~ 242 (263)
||++|+++|+++++
T Consensus 266 Te~~~~~ia~~~~~ 279 (281)
T cd01847 266 TPAGHKLIAQYALS 279 (281)
T ss_pred CHHHHHHHHHHHHH
Confidence 99999999999875
No 4
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=100.00 E-value=3.5e-40 Score=305.05 Aligned_cols=191 Identities=17% Similarity=0.168 Sum_probs=162.2
Q ss_pred CCccceecccccCC--------cccccHHHHHHHHHHHHHHHHHHhCChhHHHhhccCceEEEEeccchhhhhhcCCCCC
Q 037515 2 QGHRWATIESKIRL--------GVVISLNGQLQNHKTTVSRIASILGDQESATQHLSKCLYTVGFGSNDYINNYLLPQFY 73 (263)
Q Consensus 2 ~~~~~~~~~t~~~~--------~~~~~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~ 73 (263)
+|+||+...++... +..++|.+||++|+.. +++||+||+|+|||++ |.
T Consensus 197 ~G~NFA~GGA~~~t~~~~~~~~~~~~~L~~Qv~~~~~~------------------~~aL~lV~iG~NDy~~-~~----- 252 (408)
T PRK15381 197 EMLNFAEGGSTSASYSCFNCIGDFVSNTDRQVASYTPS------------------HQDLAIFLLGANDYMT-LH----- 252 (408)
T ss_pred CCceEeecccccccccccccccCccCCHHHHHHHHHhc------------------CCcEEEEEeccchHHH-hH-----
Confidence 58899998877531 1246899999985421 5799999999999983 31
Q ss_pred CCCCCCChhhhHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCCcchhHhhHHHHHHHHHHHHHHHH
Q 037515 74 PTSRQYPPDQYATVLIQQYSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYINKAIQLFNTNLKTLVDD 153 (263)
Q Consensus 74 ~~~~~~~~~~~~~~~v~~~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~ 153 (263)
.++++.+++++..+|++||++|||||+|+|+||+||+|..+.. ...+.+|.+++.||++|+++|++
T Consensus 253 --------~~~v~~vV~~~~~~l~~Ly~lGARk~vV~nlpPlGC~P~~~~~------~~~~~~N~~a~~fN~~L~~~L~~ 318 (408)
T PRK15381 253 --------KDNVIMVVEQQIDDIEKIISGGVNNVLVMGIPDLSLTPYGKHS------DEKRKLKDESIAHNALLKTNVEE 318 (408)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCcchhhcc------CchHHHHHHHHHHHHHHHHHHHH
Confidence 2467889999999999999999999999999999999987643 13578999999999999999999
Q ss_pred HHhhCCCcEEEEEecchhhhh---c-cCCCcccCCCCCcCcCccCCccCCCCCccccccCCCCCCCCCCCCeeecCCChh
Q 037515 154 LNNQFRDAKFIYINAYDLLFA---D-ASVGIQDDLVTTIIGPCCPVANLPMNNGILTCIPFSTSCSIRYANIFWDGVHSS 229 (263)
Q Consensus 154 l~~~~p~~~i~~~D~y~~~~~---n-~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C~~~~~~C~~p~~y~fwD~~HPT 229 (263)
|++++||++|+++|+|+++.+ | ++|||+ ++ +. ||+. |..+....|.+...+|. +|+|||.+|||
T Consensus 319 L~~~~pg~~ivy~D~y~~~~~ii~nP~~yGF~---~~--~~-cCg~---G~~~~~~~C~p~~~~C~---~YvFWD~vHPT 386 (408)
T PRK15381 319 LKEKYPQHKICYYETADAFKVIMEAASNIGYD---TE--NP-YTHH---GYVHVPGAKDPQLDICP---QYVFNDLVHPT 386 (408)
T ss_pred HHHhCCCCEEEEEEhHHHHHHHHhCHHhcCCC---cc--cc-ccCC---CccCCccccCcccCCCC---ceEecCCCCCh
Confidence 999999999999999999876 7 999999 87 54 9998 76666667888778895 99999999999
Q ss_pred HHHHHHHHHHHhh
Q 037515 230 ETVNVITGRRAYM 242 (263)
Q Consensus 230 ~~~h~~ia~~~~~ 242 (263)
+++|+++|.++-+
T Consensus 387 e~ah~iiA~~~~~ 399 (408)
T PRK15381 387 QEVHHCFAIMLES 399 (408)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998754
No 5
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=100.00 E-value=6.2e-39 Score=283.49 Aligned_cols=203 Identities=19% Similarity=0.283 Sum_probs=171.9
Q ss_pred CCccceecccccCC-------cccccHHHHHHHHHHHHHHHHHHhCChhHHHhhccCceEEEEeccchhhhhhcCCCCCC
Q 037515 2 QGHRWATIESKIRL-------GVVISLNGQLQNHKTTVSRIASILGDQESATQHLSKCLYTVGFGSNDYINNYLLPQFYP 74 (263)
Q Consensus 2 ~~~~~~~~~t~~~~-------~~~~~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~ 74 (263)
+|.||+....+... ...++|..||++|+++... +..+++||+||+|+||+...+..
T Consensus 56 ~~~N~A~~Ga~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~------------~~~~~~l~~i~~G~ND~~~~~~~----- 118 (270)
T cd01846 56 QGYNYAVGGATAGAYNVPPYPPTLPGLSDQVAAFLAAHKL------------RLPPDTLVAIWIGANDLLNALDL----- 118 (270)
T ss_pred CcceeEecccccCCcccCCCCCCCCCHHHHHHHHHHhccC------------CCCCCcEEEEEeccchhhhhccc-----
Confidence 68888888776532 2357999999999886432 34678999999999999864321
Q ss_pred CCCCCChhhhHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCCcchhHhhHHHHHHHHHHHHHHHHH
Q 037515 75 TSRQYPPDQYATVLIQQYSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYINKAIQLFNTNLKTLVDDL 154 (263)
Q Consensus 75 ~~~~~~~~~~~~~~v~~~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l 154 (263)
......+++.+++++.+.|++|+++|+|+|+|+++||+||+|..+..... ..+.+|.+++.||++|++++++|
T Consensus 119 ---~~~~~~~~~~~~~~~~~~i~~l~~~g~~~i~v~~~p~~~~~P~~~~~~~~----~~~~~~~~~~~~N~~L~~~l~~l 191 (270)
T cd01846 119 ---PQNPDTLVTRAVDNLFQALQRLYAAGARNFLVLNLPDLGLTPAFQAQGDA----VAARATALTAAYNAKLAEKLAEL 191 (270)
T ss_pred ---cccccccHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccCCcc----cHHHHHHHHHHHHHHHHHHHHHH
Confidence 12345688999999999999999999999999999999999998865321 12689999999999999999999
Q ss_pred HhhCCCcEEEEEecchhhhh---c-cCCCcccCCCCCcCcCccCCccCCCCCccccccCCCCCCCCCCCCeeecCCChhH
Q 037515 155 NNQFRDAKFIYINAYDLLFA---D-ASVGIQDDLVTTIIGPCCPVANLPMNNGILTCIPFSTSCSIRYANIFWDGVHSSE 230 (263)
Q Consensus 155 ~~~~p~~~i~~~D~y~~~~~---n-~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C~~~~~~C~~p~~y~fwD~~HPT~ 230 (263)
++++|+++|+++|+|..+.+ + ++|||+ ++ ..+||+. +. |.+....|.+|++|+|||++|||+
T Consensus 192 ~~~~~~~~i~~~D~~~~~~~~~~~p~~yGf~---~~--~~~C~~~---~~------~~~~~~~c~~~~~y~fwD~~HpT~ 257 (270)
T cd01846 192 KAQHPGVNILLFDTNALFNDILDNPAAYGFT---NV--TDPCLDY---VY------SYSPREACANPDKYLFWDEVHPTT 257 (270)
T ss_pred HHhCCCCeEEEEEhHHHHHHHHhCHHhcCCC---cC--cchhcCC---Cc------cccccCCCCCccceEEecCCCccH
Confidence 99999999999999999876 7 999999 88 9999986 32 766678999999999999999999
Q ss_pred HHHHHHHHHHhh
Q 037515 231 TVNVITGRRAYM 242 (263)
Q Consensus 231 ~~h~~ia~~~~~ 242 (263)
++|+++|+.+++
T Consensus 258 ~~~~~iA~~~~~ 269 (270)
T cd01846 258 AVHQLIAEEVAA 269 (270)
T ss_pred HHHHHHHHHHHh
Confidence 999999999875
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=99.94 E-value=1.9e-26 Score=207.02 Aligned_cols=198 Identities=22% Similarity=0.284 Sum_probs=148.9
Q ss_pred cccHHHHHHHHHHHHHHHHHHhCChhHHHhhccCceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHH
Q 037515 18 VISLNGQLQNHKTTVSRIASILGDQESATQHLSKCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLK 97 (263)
Q Consensus 18 ~~~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~ 97 (263)
..+|.+|+.+|+...... .+......-..-.+.|+.+|.|+|||+..-.. .....+.+......++...|+
T Consensus 131 ~~~~~~Qv~~~l~a~~~~--~v~~~~~~~~l~p~~l~~~~ggand~~~~~~~-------~a~~~q~~~~~~~~~~~~~Vq 201 (370)
T COG3240 131 ATSLAQQVGAFLAAGQGG--FVWPNYPAQGLDPSALYFLWGGANDYLALPML-------KAAAYQQLEGSTKADQSSAVQ 201 (370)
T ss_pred ccchHHHHHHHHHhcCCc--cccccccccccCHHHHHHHhhcchhhhccccc-------chhhhHHHhcchhhHHHHHHH
Confidence 579999999999875531 01110001112356889999999999852111 111222333444667999999
Q ss_pred HHHHhCCcEEEEecCCCCCccccccccccCCCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhh---
Q 037515 98 TLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFA--- 174 (263)
Q Consensus 98 ~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~--- 174 (263)
+|.++|||+++|+++|+++.+|...... .-...+..++..||..|++.|++++ .+|+++|++.++.+
T Consensus 202 ~L~~AGA~~i~v~~lpDl~l~P~~~~~~-----~~~~~a~~~t~~~Na~L~~~L~~~g-----~nIi~iD~~~llk~im~ 271 (370)
T COG3240 202 RLIAAGARNILVMTLPDLSLTPAGKAYG-----TEAIQASQATIAFNASLTSQLEQLG-----GNIIRIDTYTLLKEIMT 271 (370)
T ss_pred HHHHhhccEEEEeecccccccccccccc-----chHHHHHHHHHHHHHHHHHHHHHhc-----CcEEEeEhHHHHHHHHh
Confidence 9999999999999999999999877642 1233788899999999999998875 68999999999876
Q ss_pred c-cCCCcccCCCCCcCcCccCCccCCCCCccccccCCCCC-CCCCCCCeeecCCChhHHHHHHHHHHHhhcC
Q 037515 175 D-ASVGIQDDLVTTIIGPCCPVANLPMNNGILTCIPFSTS-CSIRYANIFWDGVHSSETVNVITGRRAYMAL 244 (263)
Q Consensus 175 n-~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C~~~~~~-C~~p~~y~fwD~~HPT~~~h~~ia~~~~~~~ 244 (263)
| ++|||+ |+ +..||.. ...++ .|.+..+. |..|++|+|||++|||+++|++||+++++..
T Consensus 272 nPa~fGla---nt--~~~~c~~---~~~~~--~~~a~~p~~~~~~~~ylFaD~vHPTt~~H~liAeyila~l 333 (370)
T COG3240 272 NPAEFGLA---NT--TAPACDA---TVSNP--ACSASLPALCAAPQKYLFADSVHPTTAVHHLIAEYILARL 333 (370)
T ss_pred CHHhcCcc---cC--CCcccCc---ccCCc--ccccccccccCCccceeeecccCCchHHHHHHHHHHHHHH
Confidence 8 999999 88 8889976 44333 57665555 4567789999999999999999999998854
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=99.79 E-value=1.7e-19 Score=153.82 Aligned_cols=148 Identities=24% Similarity=0.484 Sum_probs=116.9
Q ss_pred ccCceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHhCCc-----EEEEecCCCCCccccccc
Q 037515 49 LSKCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNYGAK-----KIALFGIGPLGCAPGPVA 123 (263)
Q Consensus 49 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~GAr-----~~~V~nlpplgc~P~~~~ 123 (263)
.+.+|++|++|+||++. . .........++.+++++.+.|++|++.|+| +++++++||++|.|....
T Consensus 81 ~~~~lv~i~~G~ND~~~--~-------~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (234)
T PF00657_consen 81 YDPDLVVIWIGTNDYFN--N-------RDSSDNNTSVEEFVENLRNAIKRLRSNGARLIIVANIVVINLPPIGCLPAWSS 151 (234)
T ss_dssp HTTSEEEEE-SHHHHSS--C-------CSCSTTHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEHHC-GGGSTTHHH
T ss_pred CCcceEEEecccCcchh--h-------cccchhhhhHhhHhhhhhhhhhHHhccCCcccccccccccccccccccccccc
Confidence 46789999999999874 1 112244678889999999999999999999 999999999999887665
Q ss_pred cccCCCCcchhHhhHHHHHHHHHHHHHHHHHHhhCC-CcEEEEEecchhhhhccCCCcccCCCCCcCcCccCCccCCCCC
Q 037515 124 MYGTNGSACVDYINKAIQLFNTNLKTLVDDLNNQFR-DAKFIYINAYDLLFADASVGIQDDLVTTIIGPCCPVANLPMNN 202 (263)
Q Consensus 124 ~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p-~~~i~~~D~y~~~~~n~~yGf~~~~n~~~~~aCcg~~~~g~~~ 202 (263)
... ....|.+.++..+..||++|++.+.++++.++ +.++.++|+++.+.+. +++. +. .
T Consensus 152 ~~~-~~~~~~~~~~~~~~~~n~~l~~~~~~l~~~~~~~~~v~~~D~~~~~~~~--~~~~---~~------------~--- 210 (234)
T PF00657_consen 152 NNK-DSASCIERLNAIVAAFNSALREVAAQLRKDYPKGANVPYFDIYSIFSDM--YGIQ---NP------------E--- 210 (234)
T ss_dssp THT-TTCTTHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCTEEEEEHHHHHHHH--HHHH---HG------------G---
T ss_pred ccc-cccccchhhHHHHHHHHHHHHHHhhhcccccccCCceEEEEHHHHHHHh--hhcc---Cc------------c---
Confidence 432 34579999999999999999999999988776 8899999999876552 1122 11 0
Q ss_pred ccccccCCCCCCCCCCCCeeecCCChhHHHHHHHHHHH
Q 037515 203 GILTCIPFSTSCSIRYANIFWDGVHSSETVNVITGRRA 240 (263)
Q Consensus 203 ~~~~C~~~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~ 240 (263)
.++|+|||++|||+++|+++|+++
T Consensus 211 --------------~~~~~~~D~~Hpt~~g~~~iA~~i 234 (234)
T PF00657_consen 211 --------------NDKYMFWDGVHPTEKGHKIIAEYI 234 (234)
T ss_dssp --------------HHHCBBSSSSSB-HHHHHHHHHHH
T ss_pred --------------cceeccCCCcCCCHHHHHHHHcCC
Confidence 057999999999999999999975
No 8
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.69 E-value=3.1e-07 Score=76.00 Aligned_cols=128 Identities=15% Similarity=0.165 Sum_probs=81.5
Q ss_pred ceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHH-HhCCcEEEEecCCCCCccccccccccCCCC
Q 037515 52 CLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLH-NYGAKKIALFGIGPLGCAPGPVAMYGTNGS 130 (263)
Q Consensus 52 sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~-~~GAr~~~V~nlpplgc~P~~~~~~~~~~~ 130 (263)
.+++|++|.||....+. ...+ .+....++.+.|+.+. .....++++.+.+|....+...
T Consensus 63 d~v~l~~G~ND~~~~~~--------~~~~----~~~~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~~-------- 122 (191)
T cd01834 63 DVVSIMFGINDSFRGFD--------DPVG----LEKFKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDPL-------- 122 (191)
T ss_pred CEEEEEeecchHhhccc--------cccc----HHHHHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCCC--------
Confidence 79999999999974221 0112 3455667777777775 3445567887766543321100
Q ss_pred cchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhccCCCcccCCCCCcCcCccCCccCCCCCccccccCC
Q 037515 131 ACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFADASVGIQDDLVTTIIGPCCPVANLPMNNGILTCIPF 210 (263)
Q Consensus 131 ~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C~~~ 210 (263)
.-....+.....||+.+++..++ + .+.++|+++.+.+. . .|.
T Consensus 123 ~~~~~~~~~~~~~n~~l~~~a~~----~---~~~~iD~~~~~~~~---------~-----~~~----------------- 164 (191)
T cd01834 123 PDGAEYNANLAAYADAVRELAAE----N---GVAFVDLFTPMKEA---------F-----QKA----------------- 164 (191)
T ss_pred CChHHHHHHHHHHHHHHHHHHHH----c---CCeEEecHHHHHHH---------H-----HhC-----------------
Confidence 01245567778888888775443 2 36688998865442 0 000
Q ss_pred CCCCCCCCCCeeecCCChhHHHHHHHHHHHhhc
Q 037515 211 STSCSIRYANIFWDGVHSSETVNVITGRRAYMA 243 (263)
Q Consensus 211 ~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~~ 243 (263)
+.+++++|++||++++|+++|+.+.++
T Consensus 165 ------~~~~~~~D~~Hpn~~G~~~~a~~~~~~ 191 (191)
T cd01834 165 ------GEAVLTVDGVHPNEAGHRALARLWLEA 191 (191)
T ss_pred ------CCccccCCCCCCCHHHHHHHHHHHHhC
Confidence 124567999999999999999998763
No 9
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.67 E-value=3.2e-07 Score=76.99 Aligned_cols=137 Identities=10% Similarity=0.066 Sum_probs=81.9
Q ss_pred ceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCCc
Q 037515 52 CLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSA 131 (263)
Q Consensus 52 sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~ 131 (263)
++.+|.+|.||..... ... .......+++.+...+++...++++.+.|++ +++++.||+.-
T Consensus 61 d~vii~~G~ND~~~~~-~~~---~~~~~~~~~~~~~~~~~l~~lv~~~~~~~~~-vili~~pp~~~-------------- 121 (200)
T cd01829 61 DVVVVFLGANDRQDIR-DGD---GYLKFGSPEWEEEYRQRIDELLNVARAKGVP-VIWVGLPAMRS-------------- 121 (200)
T ss_pred CEEEEEecCCCCcccc-CCC---ceeecCChhHHHHHHHHHHHHHHHHHhCCCc-EEEEcCCCCCC--------------
Confidence 6889999999986321 110 0001122345666677778888877777776 77777777531
Q ss_pred chhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhccCCCcccCCCCCcCcCccCCccCCCCCccccccCCC
Q 037515 132 CVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFADASVGIQDDLVTTIIGPCCPVANLPMNNGILTCIPFS 211 (263)
Q Consensus 132 c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C~~~~ 211 (263)
...+.....+|..+++...+ . + +.++|+++.+.+. ..|+... +.
T Consensus 122 --~~~~~~~~~~~~~~~~~a~~----~-~--~~~id~~~~~~~~--------------~~~~~~~--~~----------- 165 (200)
T cd01829 122 --PKLSADMVYLNSLYREEVAK----A-G--GEFVDVWDGFVDE--------------NGRFTYS--GT----------- 165 (200)
T ss_pred --hhHhHHHHHHHHHHHHHHHH----c-C--CEEEEhhHhhcCC--------------CCCeeee--cc-----------
Confidence 11234456778777665432 2 2 5688998764331 1233210 00
Q ss_pred CCCCCCCCCeeecCCChhHHHHHHHHHHHhhc
Q 037515 212 TSCSIRYANIFWDGVHSSETVNVITGRRAYMA 243 (263)
Q Consensus 212 ~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~~ 243 (263)
.+...+..+...|++|||+.+|+++|+.+...
T Consensus 166 ~~~~~~~~~~~~DgvH~~~~G~~~~a~~i~~~ 197 (200)
T cd01829 166 DVNGKKVRLRTNDGIHFTAAGGRKLAFYVEKL 197 (200)
T ss_pred CCCCcEEEeecCCCceECHHHHHHHHHHHHHH
Confidence 01112234556799999999999999998763
No 10
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.67 E-value=4.3e-07 Score=72.80 Aligned_cols=122 Identities=15% Similarity=0.147 Sum_probs=79.7
Q ss_pred ccCceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHH-hCCcEEEEecCCCCCccccccccccC
Q 037515 49 LSKCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHN-YGAKKIALFGIGPLGCAPGPVAMYGT 127 (263)
Q Consensus 49 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~-~GAr~~~V~nlpplgc~P~~~~~~~~ 127 (263)
.+-.++++.+|+||+.... ........+.+.+.++.+.+ ....+|++++.|+.+..|.
T Consensus 64 ~~~d~vil~~G~ND~~~~~--------------~~~~~~~~~~~~~~i~~~~~~~~~~~vv~~~~~~~~~~~~------- 122 (187)
T cd00229 64 DKPDLVIIELGTNDLGRGG--------------DTSIDEFKANLEELLDALRERAPGAKVILITPPPPPPREG------- 122 (187)
T ss_pred CCCCEEEEEeccccccccc--------------ccCHHHHHHHHHHHHHHHHHHCCCCcEEEEeCCCCCCCch-------
Confidence 4568999999999986311 01123445556666666664 5667889998888776653
Q ss_pred CCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhccCCCcccCCCCCcCcCccCCccCCCCCccccc
Q 037515 128 NGSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFADASVGIQDDLVTTIIGPCCPVANLPMNNGILTC 207 (263)
Q Consensus 128 ~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C 207 (263)
..+.....+|..+++..++.... ..+.++|++.. +. .
T Consensus 123 -------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~--------~~-----------------~-------- 159 (187)
T cd00229 123 -------LLGRALPRYNEAIKAVAAENPAP---SGVDLVDLAAL--------LG-----------------D-------- 159 (187)
T ss_pred -------hhHHHHHHHHHHHHHHHHHcCCC---cceEEEEhhhh--------hC-----------------C--------
Confidence 22344567777777765544321 33556676532 11 0
Q ss_pred cCCCCCCCCCCCCeeecCCChhHHHHHHHHHHHhh
Q 037515 208 IPFSTSCSIRYANIFWDGVHSSETVNVITGRRAYM 242 (263)
Q Consensus 208 ~~~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 242 (263)
.+..+++||++|||+++|+.+|+.+++
T Consensus 160 --------~~~~~~~~Dg~H~~~~G~~~~a~~i~~ 186 (187)
T cd00229 160 --------EDKSLYSPDGIHPNPAGHKLIAEALAS 186 (187)
T ss_pred --------CccccccCCCCCCchhhHHHHHHHHhc
Confidence 034678899999999999999998864
No 11
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.66 E-value=4.6e-07 Score=73.18 Aligned_cols=116 Identities=17% Similarity=0.221 Sum_probs=79.0
Q ss_pred cCceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHhCCc-EEEEecCCCCCccccccccccCC
Q 037515 50 SKCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNYGAK-KIALFGIGPLGCAPGPVAMYGTN 128 (263)
Q Consensus 50 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~GAr-~~~V~nlpplgc~P~~~~~~~~~ 128 (263)
.-++++|.+|+||.... .+ ++....++...|+++.+.+.+ ++++..+||..-.+
T Consensus 40 ~pd~vvi~~G~ND~~~~------------~~----~~~~~~~~~~~i~~i~~~~p~~~ii~~~~~p~~~~~--------- 94 (157)
T cd01833 40 KPDVVLLHLGTNDLVLN------------RD----PDTAPDRLRALIDQMRAANPDVKIIVATLIPTTDAS--------- 94 (157)
T ss_pred CCCEEEEeccCcccccC------------CC----HHHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCCcc---------
Confidence 44799999999998631 12 244567777777877776332 35666665532111
Q ss_pred CCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhccCCCcccCCCCCcCcCccCCccCCCCCcccccc
Q 037515 129 GSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFADASVGIQDDLVTTIIGPCCPVANLPMNNGILTCI 208 (263)
Q Consensus 129 ~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C~ 208 (263)
.+.....||+.+++.+++.+.. +..+.++|++.. |. +
T Consensus 95 -------~~~~~~~~n~~l~~~~~~~~~~--~~~v~~vd~~~~--------~~-----------------~--------- 131 (157)
T cd01833 95 -------GNARIAEYNAAIPGVVADLRTA--GSPVVLVDMSTG--------YT-----------------T--------- 131 (157)
T ss_pred -------hhHHHHHHHHHHHHHHHHHhcC--CCCEEEEecCCC--------CC-----------------C---------
Confidence 1567789999999988886543 456777886531 10 0
Q ss_pred CCCCCCCCCCCCeeecCCChhHHHHHHHHHHHhhc
Q 037515 209 PFSTSCSIRYANIFWDGVHSSETVNVITGRRAYMA 243 (263)
Q Consensus 209 ~~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~~ 243 (263)
+++.+|++||++++|+.+|+.++++
T Consensus 132 ----------~~~~~Dg~Hpn~~Gy~~~a~~~~~~ 156 (157)
T cd01833 132 ----------ADDLYDGLHPNDQGYKKMADAWYEA 156 (157)
T ss_pred ----------cccccCCCCCchHHHHHHHHHHHhh
Confidence 3467999999999999999998864
No 12
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=98.61 E-value=5.2e-07 Score=74.09 Aligned_cols=119 Identities=18% Similarity=0.144 Sum_probs=77.9
Q ss_pred ceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHh-CCcEEEEecCCCCCccccccccccCCCC
Q 037515 52 CLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNY-GAKKIALFGIGPLGCAPGPVAMYGTNGS 130 (263)
Q Consensus 52 sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~-GAr~~~V~nlpplgc~P~~~~~~~~~~~ 130 (263)
.+.+|++|.||.... .+ .+...+++.+.++++.+. ...++++.++||..-.+.
T Consensus 53 d~v~i~~G~ND~~~~------------~~----~~~~~~~~~~l~~~~~~~~p~~~vi~~~~~p~~~~~~---------- 106 (174)
T cd01841 53 SKVFLFLGTNDIGKE------------VS----SNQFIKWYRDIIEQIREEFPNTKIYLLSVLPVLEEDE---------- 106 (174)
T ss_pred CEEEEEeccccCCCC------------CC----HHHHHHHHHHHHHHHHHHCCCCEEEEEeeCCcCcccc----------
Confidence 688999999997521 02 234566777777777765 456889999887643221
Q ss_pred cchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhccCCCcccCCCCCcCcCccCCccCCCCCccccccCC
Q 037515 131 ACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFADASVGIQDDLVTTIIGPCCPVANLPMNNGILTCIPF 210 (263)
Q Consensus 131 ~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C~~~ 210 (263)
+....+.....||+.+++..++ + .+.++|+++.+.+ . . |.
T Consensus 107 -~~~~~~~~~~~~n~~l~~~a~~----~---~~~~id~~~~~~~-----------~--------~---~~---------- 146 (174)
T cd01841 107 -IKTRSNTRIQRLNDAIKELAPE----L---GVTFIDLNDVLVD-----------E--------F---GN---------- 146 (174)
T ss_pred -cccCCHHHHHHHHHHHHHHHHH----C---CCEEEEcHHHHcC-----------C--------C---CC----------
Confidence 1122345677899888875443 2 2668898765322 1 0 10
Q ss_pred CCCCCCCCCCeeecCCChhHHHHHHHHHHHhh
Q 037515 211 STSCSIRYANIFWDGVHSSETVNVITGRRAYM 242 (263)
Q Consensus 211 ~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 242 (263)
..+.+..|++||++++|+++|+.+.+
T Consensus 147 ------~~~~~~~DglH~n~~Gy~~~a~~l~~ 172 (174)
T cd01841 147 ------LKKEYTTDGLHFNPKGYQKLLEILEE 172 (174)
T ss_pred ------ccccccCCCcccCHHHHHHHHHHHHh
Confidence 01235689999999999999998864
No 13
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.56 E-value=1e-06 Score=73.52 Aligned_cols=121 Identities=17% Similarity=0.170 Sum_probs=77.6
Q ss_pred cCceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHH-hCCcEEEEecCCCCCccccccccccCC
Q 037515 50 SKCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHN-YGAKKIALFGIGPLGCAPGPVAMYGTN 128 (263)
Q Consensus 50 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~-~GAr~~~V~nlpplgc~P~~~~~~~~~ 128 (263)
.-.+.+|.+|.||+... .+ .++...++.+.++++.+ ....++++.++||+++.|....
T Consensus 67 ~pd~Vii~~G~ND~~~~------------~~----~~~~~~~l~~li~~i~~~~~~~~iiv~~~p~~~~~~~~~~----- 125 (191)
T cd01836 67 RFDVAVISIGVNDVTHL------------TS----IARWRKQLAELVDALRAKFPGARVVVTAVPPLGRFPALPQ----- 125 (191)
T ss_pred CCCEEEEEecccCcCCC------------CC----HHHHHHHHHHHHHHHHhhCCCCEEEEECCCCcccCCCCcH-----
Confidence 34789999999998521 12 24556667777777776 3566899999999887653211
Q ss_pred CCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhccCCCcccCCCCCcCcCccCCccCCCCCcccccc
Q 037515 129 GSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFADASVGIQDDLVTTIIGPCCPVANLPMNNGILTCI 208 (263)
Q Consensus 129 ~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C~ 208 (263)
......+.....+|+.+++.. +++++ +.++|++.. |.
T Consensus 126 --~~~~~~~~~~~~~n~~~~~~a----~~~~~--~~~id~~~~--------~~--------------------------- 162 (191)
T cd01836 126 --PLRWLLGRRARLLNRALERLA----SEAPR--VTLLPATGP--------LF--------------------------- 162 (191)
T ss_pred --HHHHHHHHHHHHHHHHHHHHH----hcCCC--eEEEecCCc--------cc---------------------------
Confidence 122334555667776666544 33444 445565421 00
Q ss_pred CCCCCCCCCCCCeeecCCChhHHHHHHHHHHHhhc
Q 037515 209 PFSTSCSIRYANIFWDGVHSSETVNVITGRRAYMA 243 (263)
Q Consensus 209 ~~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~~ 243 (263)
.+++.-|++||++++|+++|+.+.+.
T Consensus 163 ---------~~~~~~DglHpn~~Gy~~~a~~l~~~ 188 (191)
T cd01836 163 ---------PALFASDGFHPSAAGYAVWAEALAPA 188 (191)
T ss_pred ---------hhhccCCCCCCChHHHHHHHHHHHHH
Confidence 12345699999999999999998763
No 14
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.50 E-value=1.2e-06 Score=71.56 Aligned_cols=117 Identities=16% Similarity=0.173 Sum_probs=75.5
Q ss_pred CceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHH--hCCcEEEEecCCCCCccccccccccCC
Q 037515 51 KCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHN--YGAKKIALFGIGPLGCAPGPVAMYGTN 128 (263)
Q Consensus 51 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~--~GAr~~~V~nlpplgc~P~~~~~~~~~ 128 (263)
-.++++.+|.||.... .++ +....++.+.|+++.+ .++ ++++.++||.+ +.
T Consensus 49 pd~vvl~~G~ND~~~~------------~~~----~~~~~~l~~li~~~~~~~~~~-~vi~~~~~p~~--~~-------- 101 (169)
T cd01828 49 PKAIFIMIGINDLAQG------------TSD----EDIVANYRTILEKLRKHFPNI-KIVVQSILPVG--EL-------- 101 (169)
T ss_pred CCEEEEEeeccCCCCC------------CCH----HHHHHHHHHHHHHHHHHCCCC-eEEEEecCCcC--cc--------
Confidence 3789999999998521 122 3455666777777776 454 58888888765 10
Q ss_pred CCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhccCCCcccCCCCCcCcCccCCccCCCCCcccccc
Q 037515 129 GSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFADASVGIQDDLVTTIIGPCCPVANLPMNNGILTCI 208 (263)
Q Consensus 129 ~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C~ 208 (263)
....+..+..||+.+++..++ ++ +.++|+++.+.+ . . |
T Consensus 102 ----~~~~~~~~~~~n~~l~~~a~~-----~~--~~~id~~~~~~~-----------~--------~---~--------- 139 (169)
T cd01828 102 ----KSIPNEQIEELNRQLAQLAQQ-----EG--VTFLDLWAVFTN-----------A--------D---G--------- 139 (169)
T ss_pred ----CcCCHHHHHHHHHHHHHHHHH-----CC--CEEEechhhhcC-----------C--------C---C---------
Confidence 112334567889888775442 33 456788764221 1 0 1
Q ss_pred CCCCCCCCCCCCeeecCCChhHHHHHHHHHHHhhc
Q 037515 209 PFSTSCSIRYANIFWDGVHSSETVNVITGRRAYMA 243 (263)
Q Consensus 209 ~~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~~ 243 (263)
+..+++.+|++|||+++|+++|+.+...
T Consensus 140 -------~~~~~~~~DgiHpn~~G~~~~a~~i~~~ 167 (169)
T cd01828 140 -------DLKNEFTTDGLHLNAKGYAVWAAALQPY 167 (169)
T ss_pred -------CcchhhccCccccCHHHHHHHHHHHHHh
Confidence 1124567899999999999999998753
No 15
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.49 E-value=1.3e-06 Score=73.98 Aligned_cols=56 Identities=23% Similarity=0.115 Sum_probs=37.3
Q ss_pred ceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCC
Q 037515 52 CLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNYGAKKIALFGIGPLG 116 (263)
Q Consensus 52 sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~GAr~~~V~nlpplg 116 (263)
.+.+|.+|.||........ ..+...++...+++...++++.+.|+ ++++.++||..
T Consensus 76 ~~vii~~G~ND~~~~~~~~--------~~~~~~~~~~~~~l~~ii~~~~~~~~-~vil~t~~P~~ 131 (204)
T cd01830 76 RTVIILEGVNDIGASGTDF--------AAAPVTAEELIAGYRQLIRRAHARGI-KVIGATITPFE 131 (204)
T ss_pred CEEEEeccccccccccccc--------ccCCCCHHHHHHHHHHHHHHHHHCCC-eEEEecCCCCC
Confidence 5789999999986321110 01112345667788888888888887 57778888753
No 16
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.45 E-value=1.8e-06 Score=73.21 Aligned_cols=119 Identities=15% Similarity=0.164 Sum_probs=72.8
Q ss_pred cCceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHh------CCcEEEEecCCCCCccccccc
Q 037515 50 SKCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNY------GAKKIALFGIGPLGCAPGPVA 123 (263)
Q Consensus 50 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~------GAr~~~V~nlpplgc~P~~~~ 123 (263)
.-++++|++|.||+...+ . .++ +...+++.+.|+++.+. +..++++...||+-..+..
T Consensus 79 ~pd~vii~lGtND~~~~~-~---------~~~----~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~~~~~~~-- 142 (208)
T cd01839 79 PLDLVIIMLGTNDLKSYF-N---------LSA----AEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPIRTPKGS-- 142 (208)
T ss_pred CCCEEEEecccccccccc-C---------CCH----HHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCccCccccc--
Confidence 347999999999986321 0 122 33445555555555554 4678899988887222111
Q ss_pred cccCCCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhccCCCcccCCCCCcCcCccCCccCCCCCc
Q 037515 124 MYGTNGSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFADASVGIQDDLVTTIIGPCCPVANLPMNNG 203 (263)
Q Consensus 124 ~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n~~yGf~~~~n~~~~~aCcg~~~~g~~~~ 203 (263)
...+....|.....||+.+++..++. ++.++|++.. +.
T Consensus 143 -----~~~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~~~--------~~---------------------- 180 (208)
T cd01839 143 -----LAGKFAGAEEKSKGLADAYRALAEEL-------GCHFFDAGSV--------GS---------------------- 180 (208)
T ss_pred -----hhhhhccHHHHHHHHHHHHHHHHHHh-------CCCEEcHHHH--------hc----------------------
Confidence 11233345667778888777665432 2345564321 00
Q ss_pred cccccCCCCCCCCCCCCeeecCCChhHHHHHHHHHHHhh
Q 037515 204 ILTCIPFSTSCSIRYANIFWDGVHSSETVNVITGRRAYM 242 (263)
Q Consensus 204 ~~~C~~~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 242 (263)
....|++|||+++|++||+.++.
T Consensus 181 ----------------~~~~DGvH~~~~G~~~~a~~l~~ 203 (208)
T cd01839 181 ----------------TSPVDGVHLDADQHAALGQALAS 203 (208)
T ss_pred ----------------cCCCCccCcCHHHHHHHHHHHHH
Confidence 02379999999999999999875
No 17
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=98.39 E-value=3.1e-06 Score=68.29 Aligned_cols=119 Identities=23% Similarity=0.347 Sum_probs=76.4
Q ss_pred cCceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCC
Q 037515 50 SKCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNG 129 (263)
Q Consensus 50 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~ 129 (263)
.-.+++|.+|.||.... .......+...+++...|+.+...| +++++.+||..-.+..
T Consensus 61 ~~d~vvi~~G~ND~~~~------------~~~~~~~~~~~~~l~~~i~~~~~~~--~vi~~~~~~~~~~~~~-------- 118 (179)
T PF13472_consen 61 KPDLVVISFGTNDVLNG------------DENDTSPEQYEQNLRRIIEQLRPHG--PVILVSPPPRGPDPRD-------- 118 (179)
T ss_dssp TCSEEEEE--HHHHCTC------------TTCHHHHHHHHHHHHHHHHHHHTTS--EEEEEE-SCSSSSTTT--------
T ss_pred CCCEEEEEccccccccc------------ccccccHHHHHHHHHHHHHhhcccC--cEEEecCCCccccccc--------
Confidence 33689999999998741 0223456778888899999998888 8889888876533221
Q ss_pred CcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhccCCCcccCCCCCcCcCccCCccCCCCCccccccC
Q 037515 130 SACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFADASVGIQDDLVTTIIGPCCPVANLPMNNGILTCIP 209 (263)
Q Consensus 130 ~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C~~ 209 (263)
.+..........+|+.+++... ++ .+.++|++..+.+ . . +
T Consensus 119 -~~~~~~~~~~~~~~~~~~~~a~----~~---~~~~id~~~~~~~-----------~--~---------~---------- 158 (179)
T PF13472_consen 119 -PKQDYLNRRIDRYNQAIRELAK----KY---GVPFIDLFDAFDD-----------H--D---------G---------- 158 (179)
T ss_dssp -THTTCHHHHHHHHHHHHHHHHH----HC---TEEEEEHHHHHBT-----------T--T---------S----------
T ss_pred -ccchhhhhhHHHHHHHHHHHHH----Hc---CCEEEECHHHHcc-----------c--c---------c----------
Confidence 1123445667778877766543 33 4668898875322 1 0 0
Q ss_pred CCCCCCCCCCCeeecCCChhHHHHHHH
Q 037515 210 FSTSCSIRYANIFWDGVHSSETVNVIT 236 (263)
Q Consensus 210 ~~~~C~~p~~y~fwD~~HPT~~~h~~i 236 (263)
...++++.|++|||+++|++|
T Consensus 159 ------~~~~~~~~D~~Hp~~~G~~~~ 179 (179)
T PF13472_consen 159 ------WFPKYYFSDGVHPNPAGHQLI 179 (179)
T ss_dssp ------CBHTCTBTTSSSBBHHHHHHH
T ss_pred ------cchhhcCCCCCCcCHHHhCcC
Confidence 112456799999999999986
No 18
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=98.39 E-value=3.3e-06 Score=70.26 Aligned_cols=133 Identities=14% Similarity=0.148 Sum_probs=77.7
Q ss_pred cCceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHH--hCCcEEEEecCCCCCccccccccccC
Q 037515 50 SKCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHN--YGAKKIALFGIGPLGCAPGPVAMYGT 127 (263)
Q Consensus 50 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~--~GAr~~~V~nlpplgc~P~~~~~~~~ 127 (263)
.-.+++|++|.||...... ....++ +...+++...|+++.+ .|+ ++++++.||.+-........
T Consensus 63 ~pd~vii~~G~ND~~~~~~-------~~~~~~----~~~~~~~~~~i~~~~~~~~~~-~ii~~t~~~~~~~~~~~~~~-- 128 (199)
T cd01838 63 QPDLVTIFFGANDAALPGQ-------PQHVPL----DEYKENLRKIVSHLKSLSPKT-KVILITPPPVDEEAWEKSLE-- 128 (199)
T ss_pred CceEEEEEecCccccCCCC-------CCcccH----HHHHHHHHHHHHHHHhhCCCC-eEEEeCCCCCCHHHHhhhhc--
Confidence 4579999999999863110 001122 3444555666666665 455 57888888765322110000
Q ss_pred CCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhccCCCcccCCCCCcCcCccCCccCCCCCccccc
Q 037515 128 NGSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFADASVGIQDDLVTTIIGPCCPVANLPMNNGILTC 207 (263)
Q Consensus 128 ~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C 207 (263)
.........|.....||+.+++...+ + .+.++|+++.+.+. . +
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~a~~----~---~~~~iD~~~~~~~~----------~------------~-------- 171 (199)
T cd01838 129 DGGSQPGRTNELLKQYAEACVEVAEE----L---GVPVIDLWTAMQEE----------A------------G-------- 171 (199)
T ss_pred cccCCccccHHHHHHHHHHHHHHHHH----h---CCcEEEHHHHHHhc----------c------------C--------
Confidence 00012334566778888877665433 2 25578988754321 0 0
Q ss_pred cCCCCCCCCCCCCeeecCCChhHHHHHHHHHHHhh
Q 037515 208 IPFSTSCSIRYANIFWDGVHSSETVNVITGRRAYM 242 (263)
Q Consensus 208 ~~~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 242 (263)
..+.++.|++||++++|+++|+.+.+
T Consensus 172 ---------~~~~~~~Dg~Hpn~~G~~~~a~~l~~ 197 (199)
T cd01838 172 ---------WLESLLTDGLHFSSKGYELLFEEIVK 197 (199)
T ss_pred ---------chhhhcCCCCCcCHhHHHHHHHHHHh
Confidence 01234579999999999999999875
No 19
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=98.39 E-value=9.4e-06 Score=71.02 Aligned_cols=159 Identities=13% Similarity=0.063 Sum_probs=85.6
Q ss_pred CceEEEEeccchhhhhhcCC-CCCC----------CCCCCChhhhHHHHHHHHHHHHHHHHHh-CCcEEEEecCCCCCcc
Q 037515 51 KCLYTVGFGSNDYINNYLLP-QFYP----------TSRQYPPDQYATVLIQQYSQKLKTLHNY-GAKKIALFGIGPLGCA 118 (263)
Q Consensus 51 ~sL~~i~iG~ND~~~~~~~~-~~~~----------~~~~~~~~~~~~~~v~~~~~~v~~L~~~-GAr~~~V~nlpplgc~ 118 (263)
-.+.+|++|+||+....... .... ...........+...+++...|++|.+. .--+|++++.|++-
T Consensus 81 ~dlV~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~~~-- 158 (259)
T cd01823 81 TDLVTITIGGNDLGFADVVKACILTGGGSSLAQEKGAADGARDAALDEVGARLKAVLDRIRERAPNARVVVVGYPRLF-- 158 (259)
T ss_pred CCEEEEEECccccchHHHHHHHhhccCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecccccc--
Confidence 47899999999985321100 0000 0000111233455667777777777754 33468999988752
Q ss_pred ccccccc-------cCCCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhccCCCcccCCCCCcCcC
Q 037515 119 PGPVAMY-------GTNGSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFADASVGIQDDLVTTIIGP 191 (263)
Q Consensus 119 P~~~~~~-------~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n~~yGf~~~~n~~~~~a 191 (263)
|...... ..-........+.....+|+.+++...+ +.+.++.++|++.. |. . ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~i~~~a~~----~~~~~v~fvD~~~~--------f~---~---~~~ 220 (259)
T cd01823 159 PPDGGDCDKSCSPGTPLTPADRPELNQLVDKLNALIRRAAAD----AGDYKVRFVDTDAP--------FA---G---HRA 220 (259)
T ss_pred cCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHH----hCCceEEEEECCCC--------cC---C---Ccc
Confidence 1100000 0000112345666777777776665443 33356888999874 33 1 233
Q ss_pred ccCCccCCCCCccccccCCCCCCCCCCCCeeecCCChhHHHHHHHHHHHhh
Q 037515 192 CCPVANLPMNNGILTCIPFSTSCSIRYANIFWDGVHSSETVNVITGRRAYM 242 (263)
Q Consensus 192 Ccg~~~~g~~~~~~~C~~~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 242 (263)
|... ..... . .+......-|++||++++|+.||+.+.+
T Consensus 221 ~~~~---~~~~~-------~---~~~~~~~~~d~~HPn~~G~~~~A~~i~~ 258 (259)
T cd01823 221 CSPD---PWSRS-------V---LDLLPTRQGKPFHPNAAGHRAIADLIVD 258 (259)
T ss_pred ccCC---Ccccc-------c---cCCCCCCCccCCCCCHHHHHHHHHHHhh
Confidence 4332 10000 0 0122335579999999999999998865
No 20
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=98.38 E-value=5e-06 Score=70.08 Aligned_cols=135 Identities=15% Similarity=0.183 Sum_probs=79.6
Q ss_pred cCceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHhCCc-EEEEecCCCCCccccccccccCC
Q 037515 50 SKCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNYGAK-KIALFGIGPLGCAPGPVAMYGTN 128 (263)
Q Consensus 50 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~GAr-~~~V~nlpplgc~P~~~~~~~~~ 128 (263)
.-.+++|.+|+||+........ ............+....++.+.|+++.+.+.+ +++|++++ .|.....
T Consensus 68 ~~d~V~i~~G~ND~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~----~p~~~~~---- 137 (204)
T cd04506 68 KADVITITIGGNDLMQVLEKNF--LSLDVEDFKKAEETYQNNLKKIFKEIRKLNPDAPIFLVGLY----NPFYVYF---- 137 (204)
T ss_pred cCCEEEEEecchhHHHHHHhcc--ccchHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecC----Ccccccc----
Confidence 4468999999999975332100 00000011123445667778888888876543 57777653 1211111
Q ss_pred CCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhccCCCcccCCCCCcCcCccCCccCCCCCcccccc
Q 037515 129 GSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFADASVGIQDDLVTTIIGPCCPVANLPMNNGILTCI 208 (263)
Q Consensus 129 ~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C~ 208 (263)
.-....+..+..||+.+++... ++. ++.++|+++.+ . .. +
T Consensus 138 --~~~~~~~~~~~~~n~~~~~~a~----~~~--~v~~vd~~~~~--------~---~~------------~--------- 177 (204)
T cd04506 138 --PNITEINDIVNDWNEASQKLAS----QYK--NAYFVPIFDLF--------S---DG------------Q--------- 177 (204)
T ss_pred --chHHHHHHHHHHHHHHHHHHHH----hCC--CeEEEehHHhh--------c---CC------------c---------
Confidence 0122457788899988777543 222 36678887632 1 10 0
Q ss_pred CCCCCCCCCCCCeeecCCChhHHHHHHHHHHHhh
Q 037515 209 PFSTSCSIRYANIFWDGVHSSETVNVITGRRAYM 242 (263)
Q Consensus 209 ~~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 242 (263)
+..++..|++||++++|++||+.+++
T Consensus 178 --------~~~~~~~Dg~Hpn~~G~~~~a~~l~~ 203 (204)
T cd04506 178 --------NKYLLTSDHFHPNDKGYQLIADRVFK 203 (204)
T ss_pred --------ccccccccCcCCCHHHHHHHHHHHHh
Confidence 12345679999999999999999875
No 21
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=98.37 E-value=1.2e-05 Score=72.22 Aligned_cols=147 Identities=14% Similarity=0.103 Sum_probs=81.9
Q ss_pred ceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHhCCc-EEEEecCCCCCccccccccccC---
Q 037515 52 CLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNYGAK-KIALFGIGPLGCAPGPVAMYGT--- 127 (263)
Q Consensus 52 sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~GAr-~~~V~nlpplgc~P~~~~~~~~--- 127 (263)
.|.+|+||+||... +... ... .......+++.+.++.|.+..-| .++++++|++...+........
T Consensus 121 klVtI~IG~ND~c~-~~~~-----~~~----~~~~~~~~nL~~~L~~Lr~~~P~~~V~lv~~~~~~~l~~~~~~p~~c~~ 190 (288)
T cd01824 121 KLITIFIGGNDLCS-LCED-----ANP----GSPQTFVKNLRKALDILRDEVPRAFVNLVGLLNVASLRSLTKKPLQCET 190 (288)
T ss_pred cEEEEEecchhHhh-hccc-----ccC----cCHHHHHHHHHHHHHHHHHhCCCcEEEEEcCCCcHHHHHhccCCccccc
Confidence 47899999999974 2111 011 23455677788888888888755 5677778777644432210000
Q ss_pred -CCCcch----------hHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhccCCCcccCCCCCcCcCccCCc
Q 037515 128 -NGSACV----------DYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFADASVGIQDDLVTTIIGPCCPVA 196 (263)
Q Consensus 128 -~~~~c~----------~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n~~yGf~~~~n~~~~~aCcg~~ 196 (263)
....|. ..+..+...|++.+++..++-+-...+..+++..+ |. +. ...--..
T Consensus 191 ~~~~~C~c~~~~~~~~~~~~~~~~~~y~~~~~eia~~~~~~~~~f~vv~qPf-----------~~---~~--~~~~~~~- 253 (288)
T cd01824 191 LLAPECPCLLGPTENSYQDLKKFYKEYQNEVEEIVESGEFDREDFAVVVQPF-----------FE---DT--SLPPLPD- 253 (288)
T ss_pred cCCCcCCCcCCCCcchHHHHHHHHHHHHHHHHHHHhcccccccCccEEeeCc-----------hh---cc--ccccccC-
Confidence 011232 35556677787777665543211112222222111 11 11 0000000
Q ss_pred cCCCCCccccccCCCCCCCCCCCCeeecCCChhHHHHHHHHHHHhhc
Q 037515 197 NLPMNNGILTCIPFSTSCSIRYANIFWDGVHSSETVNVITGRRAYMA 243 (263)
Q Consensus 197 ~~g~~~~~~~C~~~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~~ 243 (263)
| .+ .+++-||.+||++++|.++|+.+|..
T Consensus 254 --g---------------~d-~~~~~~D~~Hps~~G~~~ia~~lwn~ 282 (288)
T cd01824 254 --G---------------PD-LSFFSPDCFHFSQRGHAIAANALWNN 282 (288)
T ss_pred --C---------------Cc-chhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 0 11 26788999999999999999999874
No 22
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=98.34 E-value=7.1e-06 Score=70.01 Aligned_cols=119 Identities=12% Similarity=0.060 Sum_probs=74.5
Q ss_pred CceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHhC-CcEEEEecCCCCCccccccccccCCC
Q 037515 51 KCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNYG-AKKIALFGIGPLGCAPGPVAMYGTNG 129 (263)
Q Consensus 51 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~G-Ar~~~V~nlpplgc~P~~~~~~~~~~ 129 (263)
-.+++|.+|.||+... .+ .+...+++...|+++.+.. ..++++++++|.+..|
T Consensus 90 pd~VvI~~G~ND~~~~------------~~----~~~~~~~l~~ii~~l~~~~P~~~Iil~~~~p~~~~~---------- 143 (214)
T cd01820 90 PKVVVLLIGTNNIGHT------------TT----AEEIAEGILAIVEEIREKLPNAKILLLGLLPRGQNP---------- 143 (214)
T ss_pred CCEEEEEecccccCCC------------CC----HHHHHHHHHHHHHHHHHHCCCCeEEEEeccCCCCCc----------
Confidence 4789999999997521 02 2345677777787777663 3468888888765321
Q ss_pred CcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhccCCCcccCCCCCcCcCccCCccCCCCCccccccC
Q 037515 130 SACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFADASVGIQDDLVTTIIGPCCPVANLPMNNGILTCIP 209 (263)
Q Consensus 130 ~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C~~ 209 (263)
...+.....+|+.+++.. ++.. .+.++|++..+.+. . |.
T Consensus 144 ----~~~~~~~~~~n~~l~~~~----~~~~--~v~~vd~~~~~~~~----------~------------g~--------- 182 (214)
T cd01820 144 ----NPLRERNAQVNRLLAVRY----DGLP--NVTFLDIDKGFVQS----------D------------GT--------- 182 (214)
T ss_pred ----hhHHHHHHHHHHHHHHHh----cCCC--CEEEEeCchhhccc----------C------------CC---------
Confidence 112334556777665543 2222 46678887643210 0 10
Q ss_pred CCCCCCCCCCCeeecCCChhHHHHHHHHHHHhhc
Q 037515 210 FSTSCSIRYANIFWDGVHSSETVNVITGRRAYMA 243 (263)
Q Consensus 210 ~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~~ 243 (263)
..+..+.|++||++++|+++|+.+...
T Consensus 183 -------~~~~~~~DGlHpn~~Gy~~~a~~l~~~ 209 (214)
T cd01820 183 -------ISHHDMPDYLHLTAAGYRKWADALHPT 209 (214)
T ss_pred -------cCHhhcCCCCCCCHHHHHHHHHHHHHH
Confidence 012245799999999999999998763
No 23
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.33 E-value=7.2e-06 Score=67.81 Aligned_cols=122 Identities=16% Similarity=0.143 Sum_probs=76.9
Q ss_pred CceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCC
Q 037515 51 KCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGS 130 (263)
Q Consensus 51 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~ 130 (263)
-+++++.+|.||.... .+ ..+..+.+.+.|+.+.+.|++ ++++..||....+...
T Consensus 60 ~d~v~i~~G~ND~~~~------------~~----~~~~~~~~~~li~~~~~~~~~-~il~~~~p~~~~~~~~-------- 114 (183)
T cd04501 60 PAVVIIMGGTNDIIVN------------TS----LEMIKDNIRSMVELAEANGIK-VILASPLPVDDYPWKP-------- 114 (183)
T ss_pred CCEEEEEeccCccccC------------CC----HHHHHHHHHHHHHHHHHCCCc-EEEEeCCCcCccccch--------
Confidence 3788999999998521 02 234566677777777788886 5555666654333211
Q ss_pred cchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhccCCCcccCCCCCcCcCccCCccCCCCCccccccCC
Q 037515 131 ACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFADASVGIQDDLVTTIIGPCCPVANLPMNNGILTCIPF 210 (263)
Q Consensus 131 ~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C~~~ 210 (263)
+....+.....||+.+++...+ . .+.++|++..+.+. . +
T Consensus 115 -~~~~~~~~~~~~n~~~~~~a~~----~---~v~~vd~~~~~~~~-------------~---------~----------- 153 (183)
T cd04501 115 -QWLRPANKLKSLNRWLKDYARE----N---GLLFLDFYSPLLDE-------------R---------N----------- 153 (183)
T ss_pred -hhcchHHHHHHHHHHHHHHHHH----c---CCCEEechhhhhcc-------------c---------c-----------
Confidence 1123455667888877765543 2 36688988753321 0 0
Q ss_pred CCCCCCCCCCeeecCCChhHHHHHHHHHHHhh
Q 037515 211 STSCSIRYANIFWDGVHSSETVNVITGRRAYM 242 (263)
Q Consensus 211 ~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 242 (263)
......+..|++||++++|+++|+.+.+
T Consensus 154 ----~~~~~~~~~DgvHp~~~Gy~~~a~~i~~ 181 (183)
T cd04501 154 ----VGLKPGLLTDGLHPSREGYRVMAPLAEK 181 (183)
T ss_pred ----ccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 0112345579999999999999999865
No 24
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=98.28 E-value=3.9e-06 Score=70.54 Aligned_cols=130 Identities=15% Similarity=0.037 Sum_probs=77.4
Q ss_pred CceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCC
Q 037515 51 KCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGS 130 (263)
Q Consensus 51 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~ 130 (263)
-++++|.+|.||.... .. ....+ ++....++.+.|+++.+.|++ +++++.||.... ..
T Consensus 66 pdlVii~~G~ND~~~~--~~-----~~~~~----~~~~~~nl~~ii~~~~~~~~~-~il~tp~~~~~~---~~------- 123 (198)
T cd01821 66 GDYVLIQFGHNDQKPK--DP-----EYTEP----YTTYKEYLRRYIAEARAKGAT-PILVTPVTRRTF---DE------- 123 (198)
T ss_pred CCEEEEECCCCCCCCC--CC-----CCCCc----HHHHHHHHHHHHHHHHHCCCe-EEEECCcccccc---CC-------
Confidence 4899999999998531 10 00112 345567777888888888886 555555442111 00
Q ss_pred cchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhc-cCCCcccCCCCCcCcCccCCccCCCCCccccccC
Q 037515 131 ACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFAD-ASVGIQDDLVTTIIGPCCPVANLPMNNGILTCIP 209 (263)
Q Consensus 131 ~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n-~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C~~ 209 (263)
+. ..+.....||+.+++..++. .+.++|++..+.+- ...|-. .. . .
T Consensus 124 -~~-~~~~~~~~~~~~~~~~a~~~-------~~~~vD~~~~~~~~~~~~g~~---~~--~---------~---------- 170 (198)
T cd01821 124 -GG-KVEDTLGDYPAAMRELAAEE-------GVPLIDLNAASRALYEAIGPE---KS--K---------K---------- 170 (198)
T ss_pred -CC-cccccchhHHHHHHHHHHHh-------CCCEEecHHHHHHHHHHhChH---hH--H---------h----------
Confidence 00 22334567777777655443 35578999877652 222221 11 0 0
Q ss_pred CCCCCCCCCCCeeecCCChhHHHHHHHHHHHhh
Q 037515 210 FSTSCSIRYANIFWDGVHSSETVNVITGRRAYM 242 (263)
Q Consensus 210 ~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 242 (263)
.. .++..|++||++.+|++||+.+++
T Consensus 171 ------~~-~~~~~DgvHp~~~G~~~~a~~i~~ 196 (198)
T cd01821 171 ------YF-PEGPGDNTHFSEKGADVVARLVAE 196 (198)
T ss_pred ------hC-cCCCCCCCCCCHHHHHHHHHHHHh
Confidence 00 245679999999999999999875
No 25
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=98.26 E-value=1.2e-05 Score=72.07 Aligned_cols=55 Identities=18% Similarity=0.086 Sum_probs=37.4
Q ss_pred ceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHhCCc--EEEEecCCCC
Q 037515 52 CLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNYGAK--KIALFGIGPL 115 (263)
Q Consensus 52 sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~GAr--~~~V~nlppl 115 (263)
.+++|++|+||.....-. .... ..+++--+++.+.|+.|.+..-+ +++++++|++
T Consensus 124 ~lVtI~lGgND~C~g~~d-----~~~~----tp~eefr~NL~~~L~~Lr~~lP~~s~ViLvgmpd~ 180 (305)
T cd01826 124 ALVIYSMIGNDVCNGPND-----TINH----TTPEEFYENVMEALKYLDTKLPNGSHVILVGLVDG 180 (305)
T ss_pred eEEEEEeccchhhcCCCc-----cccC----cCHHHHHHHHHHHHHHHHhcCCCCCEEEEEeccch
Confidence 788888999998642100 0112 23445566778888888888755 8999999984
No 26
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=98.21 E-value=2.4e-05 Score=64.68 Aligned_cols=117 Identities=14% Similarity=0.160 Sum_probs=73.8
Q ss_pred cCceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHhCCcEEEEecCCCC-CccccccccccCC
Q 037515 50 SKCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNYGAKKIALFGIGPL-GCAPGPVAMYGTN 128 (263)
Q Consensus 50 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~GAr~~~V~nlppl-gc~P~~~~~~~~~ 128 (263)
.-.+++|.+|.||... . ..+ .++..+++...|+++...+++ ++++++||. +..|.
T Consensus 67 ~~d~vii~~G~ND~~~----~-------~~~----~~~~~~~~~~~i~~i~~~~~~-vil~~~~~~~~~~~~-------- 122 (185)
T cd01832 67 RPDLVTLLAGGNDILR----P-------GTD----PDTYRADLEEAVRRLRAAGAR-VVVFTIPDPAVLEPF-------- 122 (185)
T ss_pred CCCEEEEecccccccc----C-------CCC----HHHHHHHHHHHHHHHHhCCCE-EEEecCCCccccchh--------
Confidence 3478999999999852 0 112 234556667777777766775 888888887 32221
Q ss_pred CCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhccCCCcccCCCCCcCcCccCCccCCCCCcccccc
Q 037515 129 GSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFADASVGIQDDLVTTIIGPCCPVANLPMNNGILTCI 208 (263)
Q Consensus 129 ~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C~ 208 (263)
....+.....+|+.|++..++ + .+.++|++.. . . +.
T Consensus 123 ----~~~~~~~~~~~n~~l~~~a~~----~---~v~~vd~~~~--------------~--~---~~-------------- 158 (185)
T cd01832 123 ----RRRVRARLAAYNAVIRAVAAR----Y---GAVHVDLWEH--------------P--E---FA-------------- 158 (185)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHH----c---CCEEEecccC--------------c--c---cC--------------
Confidence 112344567888887776543 2 3567776531 0 0 00
Q ss_pred CCCCCCCCCCCCeeecCCChhHHHHHHHHHHHhh
Q 037515 209 PFSTSCSIRYANIFWDGVHSSETVNVITGRRAYM 242 (263)
Q Consensus 209 ~~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 242 (263)
. .+++.=|++||++++|+++|+.+++
T Consensus 159 -------~-~~~~~~DgiHpn~~G~~~~A~~i~~ 184 (185)
T cd01832 159 -------D-PRLWASDRLHPSAAGHARLAALVLA 184 (185)
T ss_pred -------C-ccccccCCCCCChhHHHHHHHHHhh
Confidence 0 1223359999999999999999875
No 27
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.21 E-value=2.7e-05 Score=63.82 Aligned_cols=118 Identities=17% Similarity=0.190 Sum_probs=73.1
Q ss_pred CceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHhCC-cEEEEecCCCCCccccccccccCCC
Q 037515 51 KCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNYGA-KKIALFGIGPLGCAPGPVAMYGTNG 129 (263)
Q Consensus 51 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~GA-r~~~V~nlpplgc~P~~~~~~~~~~ 129 (263)
-.++++.+|.||+... .+ .+...+++.+.|+++.+.+. .++++..+||. | ..
T Consensus 51 p~~vvi~~G~ND~~~~------------~~----~~~~~~~~~~lv~~i~~~~~~~~iil~~~~p~---~--~~------ 103 (171)
T cd04502 51 PRRVVLYAGDNDLASG------------RT----PEEVLRDFRELVNRIRAKLPDTPIAIISIKPS---P--AR------ 103 (171)
T ss_pred CCEEEEEEecCcccCC------------CC----HHHHHHHHHHHHHHHHHHCCCCcEEEEEecCC---C--cc------
Confidence 3689999999997421 01 34567778888888887753 35677666542 1 10
Q ss_pred CcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhccCCCcccCCCCCcCcCccCCccCCCCCccccccC
Q 037515 130 SACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFADASVGIQDDLVTTIIGPCCPVANLPMNNGILTCIP 209 (263)
Q Consensus 130 ~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C~~ 209 (263)
...+.....+|+.+++..+ +.. .+.++|+++.+.+. + +.
T Consensus 104 ----~~~~~~~~~~n~~~~~~a~----~~~--~v~~vD~~~~~~~~---------~-------------~~--------- 142 (171)
T cd04502 104 ----WALRPKIRRFNALLKELAE----TRP--NLTYIDVASPMLDA---------D-------------GK--------- 142 (171)
T ss_pred ----hhhHHHHHHHHHHHHHHHh----cCC--CeEEEECcHHHhCC---------C-------------CC---------
Confidence 1122335677777666542 223 36688987643221 0 00
Q ss_pred CCCCCCCCCCCeeecCCChhHHHHHHHHHHHhh
Q 037515 210 FSTSCSIRYANIFWDGVHSSETVNVITGRRAYM 242 (263)
Q Consensus 210 ~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 242 (263)
...+++..|++||++++|+++|+.+.+
T Consensus 143 ------~~~~~~~~DGlH~n~~Gy~~~a~~l~~ 169 (171)
T cd04502 143 ------PRAELFQEDGLHLNDAGYALWRKVIKP 169 (171)
T ss_pred ------cChhhcCCCCCCCCHHHHHHHHHHHHh
Confidence 012456689999999999999998854
No 28
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.10 E-value=2.3e-05 Score=65.38 Aligned_cols=123 Identities=15% Similarity=0.135 Sum_probs=68.1
Q ss_pred cCceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCC
Q 037515 50 SKCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNG 129 (263)
Q Consensus 50 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~ 129 (263)
.-.+.+|.+|.||....... ....+.++| .+.+...++++ +.++ +++++++||..-.+
T Consensus 69 ~pd~V~i~~G~ND~~~~~~~------~~~~~~~~~----~~~~~~ii~~~-~~~~-~vi~~~~~p~~~~~---------- 126 (193)
T cd01835 69 VPNRLVLSVGLNDTARGGRK------RPQLSARAF----LFGLNQLLEEA-KRLV-PVLVVGPTPVDEAK---------- 126 (193)
T ss_pred CCCEEEEEecCcccccccCc------ccccCHHHH----HHHHHHHHHHH-hcCC-cEEEEeCCCccccc----------
Confidence 34799999999998642100 011122223 22223333322 2344 47788877653211
Q ss_pred CcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhccCCCcccCCCCCcCcCccCCccCCCCCccccccC
Q 037515 130 SACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFADASVGIQDDLVTTIIGPCCPVANLPMNNGILTCIP 209 (263)
Q Consensus 130 ~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C~~ 209 (263)
....+.....+|+.+++..++ + .+.++|++..+.++ . .
T Consensus 127 ---~~~~~~~~~~~n~~~~~~a~~----~---~~~~vd~~~~~~~~---------~-------------~---------- 164 (193)
T cd01835 127 ---MPYSNRRIARLETAFAEVCLR----R---DVPFLDTFTPLLNH---------P-------------Q---------- 164 (193)
T ss_pred ---cchhhHHHHHHHHHHHHHHHH----c---CCCeEeCccchhcC---------c-------------H----------
Confidence 012345667788877765543 2 34578887643221 0 0
Q ss_pred CCCCCCCCCCCeeecCCChhHHHHHHHHHHHhh
Q 037515 210 FSTSCSIRYANIFWDGVHSSETVNVITGRRAYM 242 (263)
Q Consensus 210 ~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 242 (263)
...++...|++||++++|++||+.+..
T Consensus 165 ------~~~~~~~~Dg~Hpn~~G~~~~a~~~~~ 191 (193)
T cd01835 165 ------WRRELAATDGIHPNAAGYGWLAWLVLH 191 (193)
T ss_pred ------HHHhhhccCCCCCCHHHHHHHHHHHhc
Confidence 001233369999999999999998864
No 29
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.05 E-value=2.6e-05 Score=64.55 Aligned_cols=127 Identities=16% Similarity=0.060 Sum_probs=74.9
Q ss_pred CceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHh-CCcEEEEecCCCCCccccccccccCCC
Q 037515 51 KCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNY-GAKKIALFGIGPLGCAPGPVAMYGTNG 129 (263)
Q Consensus 51 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~-GAr~~~V~nlpplgc~P~~~~~~~~~~ 129 (263)
-.+++|.+|.||.... ..+ .+...+++...|+++.+. ...++++++.||....+..
T Consensus 57 pd~Vii~~G~ND~~~~-----------~~~----~~~~~~~~~~li~~i~~~~~~~~iv~~~~~~~~~~~~~-------- 113 (189)
T cd01825 57 PDLVILSYGTNEAFNK-----------QLN----ASEYRQQLREFIKRLRQILPNASILLVGPPDSLQKTGA-------- 113 (189)
T ss_pred CCEEEEECCCcccccC-----------CCC----HHHHHHHHHHHHHHHHHHCCCCeEEEEcCCchhccCCC--------
Confidence 3689999999996421 012 345567777777777774 4566888887765332210
Q ss_pred CcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhccCCCcccCCCCCcCcCccCCccCCCCCccccccC
Q 037515 130 SACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFADASVGIQDDLVTTIIGPCCPVANLPMNNGILTCIP 209 (263)
Q Consensus 130 ~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C~~ 209 (263)
+....+.....+|..+++.. +++ + +.++|+++.+.+ . |+.
T Consensus 114 --~~~~~~~~~~~~~~~~~~~a----~~~-~--v~~vd~~~~~~~----------------~-~~~-------------- 153 (189)
T cd01825 114 --GRWRTPPGLDAVIAAQRRVA----KEE-G--IAFWDLYAAMGG----------------E-GGI-------------- 153 (189)
T ss_pred --CCcccCCcHHHHHHHHHHHH----HHc-C--CeEEeHHHHhCC----------------c-chh--------------
Confidence 11112233456666555543 333 2 667898764221 1 111
Q ss_pred CCCCCCCCCCCeeecCCChhHHHHHHHHHHHhhc
Q 037515 210 FSTSCSIRYANIFWDGVHSSETVNVITGRRAYMA 243 (263)
Q Consensus 210 ~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~~ 243 (263)
.......++..|++|||+++|+.+|+.+...
T Consensus 154 ---~~~~~~~~~~~Dg~Hp~~~G~~~~a~~i~~~ 184 (189)
T cd01825 154 ---WQWAEPGLARKDYVHLTPRGYERLANLLYEA 184 (189)
T ss_pred ---hHhhcccccCCCcccCCcchHHHHHHHHHHH
Confidence 0011124566899999999999999998764
No 30
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.04 E-value=0.0001 Score=60.86 Aligned_cols=118 Identities=14% Similarity=0.157 Sum_probs=70.2
Q ss_pred cCceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHhCC-cEEEEecCCCCCccccccccccCC
Q 037515 50 SKCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNYGA-KKIALFGIGPLGCAPGPVAMYGTN 128 (263)
Q Consensus 50 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~GA-r~~~V~nlpplgc~P~~~~~~~~~ 128 (263)
.-.+++|.+|.||.... .+..+++...+++|.+.+. .++++.+.||. |.....
T Consensus 57 ~pd~vii~~G~ND~~~~-------------------~~~~~~~~~~i~~i~~~~p~~~iil~~~~~~---~~~~~~---- 110 (177)
T cd01844 57 PADLYIIDCGPNIVGAE-------------------AMVRERLGPLVKGLRETHPDTPILLVSPRYC---PDAELT---- 110 (177)
T ss_pred CCCEEEEEeccCCCccH-------------------HHHHHHHHHHHHHHHHHCcCCCEEEEecCCC---CccccC----
Confidence 44789999999996310 0567778888888887764 46777777664 321111
Q ss_pred CCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhccCCCcccCCCCCcCcCccCCccCCCCCcccccc
Q 037515 129 GSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFADASVGIQDDLVTTIIGPCCPVANLPMNNGILTCI 208 (263)
Q Consensus 129 ~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C~ 208 (263)
.......+.....+|+.+ ++++++ ..-++.++|.+++ +. .
T Consensus 111 -~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~v~~id~~~~--------~~---~----------------------- 150 (177)
T cd01844 111 -PGRGKLTLAVRRALREAF----EKLRAD-GVPNLYYLDGEEL--------LG---P----------------------- 150 (177)
T ss_pred -cchhHHHHHHHHHHHHHH----HHHHhc-CCCCEEEecchhh--------cC---C-----------------------
Confidence 011223344444444444 334332 2225667775432 11 0
Q ss_pred CCCCCCCCCCCCeeecCCChhHHHHHHHHHHHhh
Q 037515 209 PFSTSCSIRYANIFWDGVHSSETVNVITGRRAYM 242 (263)
Q Consensus 209 ~~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 242 (263)
+ .-++.|++|||+++|+++|+.+..
T Consensus 151 -------~--~~~~~DglHpn~~Gy~~~a~~l~~ 175 (177)
T cd01844 151 -------D--GEALVDGIHPTDLGHMRYADRFEP 175 (177)
T ss_pred -------C--CCCCCCCCCCCHHHHHHHHHHHhh
Confidence 0 114569999999999999998865
No 31
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=98.04 E-value=2.8e-05 Score=65.35 Aligned_cols=44 Identities=18% Similarity=0.280 Sum_probs=31.5
Q ss_pred cCceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHhCCcEEEE
Q 037515 50 SKCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNYGAKKIAL 109 (263)
Q Consensus 50 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~GAr~~~V 109 (263)
+-.+++|.+|.||.... .+ .+...+++...++++.+.|++.+++
T Consensus 71 ~pd~Vii~~GtND~~~~------------~~----~~~~~~~l~~li~~~~~~~~~~ill 114 (191)
T PRK10528 71 QPRWVLVELGGNDGLRG------------FP----PQQTEQTLRQIIQDVKAANAQPLLM 114 (191)
T ss_pred CCCEEEEEeccCcCccC------------CC----HHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 34789999999997421 12 2455677778888888889887766
No 32
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.02 E-value=8.2e-05 Score=61.66 Aligned_cols=118 Identities=14% Similarity=0.124 Sum_probs=68.9
Q ss_pred CceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHhCC-cEEEEecCCCCCccccccccccCCC
Q 037515 51 KCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNYGA-KKIALFGIGPLGCAPGPVAMYGTNG 129 (263)
Q Consensus 51 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~GA-r~~~V~nlpplgc~P~~~~~~~~~~ 129 (263)
-.+++|.+|.||..... .... +....++...|+++.+.+. .++++.+.||......
T Consensus 68 pd~Vii~~G~ND~~~~~----------~~~~----~~~~~~l~~li~~i~~~~~~~~iil~t~~p~~~~~~--------- 124 (188)
T cd01827 68 PNIVIIKLGTNDAKPQN----------WKYK----DDFKKDYETMIDSFQALPSKPKIYICYPIPAYYGDG--------- 124 (188)
T ss_pred CCEEEEEcccCCCCCCC----------CccH----HHHHHHHHHHHHHHHHHCCCCeEEEEeCCcccccCC---------
Confidence 47899999999975310 0012 3344566777777766654 4777777766532111
Q ss_pred CcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhccCCCcccCCCCCcCcCccCCccCCCCCccccccC
Q 037515 130 SACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFADASVGIQDDLVTTIIGPCCPVANLPMNNGILTCIP 209 (263)
Q Consensus 130 ~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C~~ 209 (263)
.. ...+.....+|+.+++.. +++ .+.++|+|+. +. +
T Consensus 125 -~~-~~~~~~~~~~~~~~~~~a----~~~---~~~~vD~~~~--------~~-----------------~---------- 160 (188)
T cd01827 125 -GF-INDNIIKKEIQPMIDKIA----KKL---NLKLIDLHTP--------LK-----------------G---------- 160 (188)
T ss_pred -Cc-cchHHHHHHHHHHHHHHH----HHc---CCcEEEcccc--------cc-----------------C----------
Confidence 01 112334456666665543 332 2446676532 11 0
Q ss_pred CCCCCCCCCCCeeecCCChhHHHHHHHHHHHhhc
Q 037515 210 FSTSCSIRYANIFWDGVHSSETVNVITGRRAYMA 243 (263)
Q Consensus 210 ~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~~ 243 (263)
.+ .++-|++||++++|++||+.+++.
T Consensus 161 ------~~--~~~~Dg~Hpn~~G~~~~A~~i~~~ 186 (188)
T cd01827 161 ------KP--ELVPDWVHPNEKGAYILAKVVYKA 186 (188)
T ss_pred ------Cc--cccCCCCCcCHHHHHHHHHHHHHH
Confidence 00 134699999999999999998764
No 33
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=97.86 E-value=0.0003 Score=56.71 Aligned_cols=23 Identities=17% Similarity=0.140 Sum_probs=20.3
Q ss_pred CeeecCCChhHHHHHHHHHHHhh
Q 037515 220 NIFWDGVHSSETVNVITGRRAYM 242 (263)
Q Consensus 220 y~fwD~~HPT~~~h~~ia~~~~~ 242 (263)
++..|++||++++|+++|+.+.+
T Consensus 126 ~~~~DgiHpn~~G~~~~a~~i~~ 148 (150)
T cd01840 126 WFYGDGVHPNPAGAKLYAALIAK 148 (150)
T ss_pred hhcCCCCCCChhhHHHHHHHHHH
Confidence 45579999999999999999875
No 34
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=97.86 E-value=0.00011 Score=59.96 Aligned_cols=24 Identities=21% Similarity=0.274 Sum_probs=20.6
Q ss_pred CeeecCCChhHHHHHHHHHHHhhc
Q 037515 220 NIFWDGVHSSETVNVITGRRAYMA 243 (263)
Q Consensus 220 y~fwD~~HPT~~~h~~ia~~~~~~ 243 (263)
++.-|++||++++|+++|+.+...
T Consensus 152 ~~~~DgvHpn~~G~~~~a~~i~~~ 175 (177)
T cd01822 152 LMQSDGIHPNAEGQPIIAENVWPA 175 (177)
T ss_pred hhCCCCCCcCHHHHHHHHHHHHHh
Confidence 455799999999999999998763
No 35
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=97.75 E-value=0.00047 Score=56.40 Aligned_cols=23 Identities=9% Similarity=-0.136 Sum_probs=20.2
Q ss_pred eeecCCChhHHHHHHHHHHHhhc
Q 037515 221 IFWDGVHSSETVNVITGRRAYMA 243 (263)
Q Consensus 221 ~fwD~~HPT~~~h~~ia~~~~~~ 243 (263)
.+.|++||++++|++||+.++..
T Consensus 145 ~~~DgiHPn~~G~~~iA~~l~~~ 167 (169)
T cd01831 145 DIGCDWHPTVAGHQKIAKHLLPA 167 (169)
T ss_pred CcCCCCCCCHHHHHHHHHHHHHH
Confidence 35799999999999999998763
No 36
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=97.47 E-value=0.00044 Score=58.76 Aligned_cols=135 Identities=16% Similarity=0.197 Sum_probs=83.2
Q ss_pred cCceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHhC-CcEEEEecCCCCCccccccccccCC
Q 037515 50 SKCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNYG-AKKIALFGIGPLGCAPGPVAMYGTN 128 (263)
Q Consensus 50 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~G-Ar~~~V~nlpplgc~P~~~~~~~~~ 128 (263)
.-++.+|++|+||-.. ... .+...-...++| ++++++-++-|-+.- -.++++.+-||+...-.....
T Consensus 68 ~p~lvtVffGaNDs~l---~~~-~~~~~hvPl~Ey----~dNlr~iv~~lks~~~~~riIlitPpp~de~~~~~~~---- 135 (245)
T KOG3035|consen 68 QPVLVTVFFGANDSCL---PEP-SSLGQHVPLEEY----KDNLRKIVSHLKSLSPETRIILITPPPVDEEAWEKQE---- 135 (245)
T ss_pred CceEEEEEecCccccC---CCC-CCCCCccCHHHH----HHHHHHHHHHhhccCCcceEEEecCCCcCHHHHHHHh----
Confidence 3478999999999652 111 111112344455 444555555555543 356788888877654332221
Q ss_pred CCcch---hHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhccCCCcccCCCCCcCcCccCCccCCCCCccc
Q 037515 129 GSACV---DYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFADASVGIQDDLVTTIIGPCCPVANLPMNNGIL 205 (263)
Q Consensus 129 ~~~c~---~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~ 205 (263)
...|. .+.|+.+..|++.+.+..+++ .+..+|.++.+.+. +
T Consensus 136 ~e~~~~~~~RtNe~~~~Ya~ac~~la~e~-------~l~~vdlws~~Q~~-----------------------~------ 179 (245)
T KOG3035|consen 136 QEPYVLGPERTNETVGTYAKACANLAQEI-------GLYVVDLWSKMQES-----------------------D------ 179 (245)
T ss_pred ccchhccchhhhhHHHHHHHHHHHHHHHh-------CCeeeeHHhhhhhc-----------------------c------
Confidence 11233 358999999999887766654 34467877654331 0
Q ss_pred cccCCCCCCCCCCCCeeecCCChhHHHHHHHHHHHhh
Q 037515 206 TCIPFSTSCSIRYANIFWDGVHSSETVNVITGRRAYM 242 (263)
Q Consensus 206 ~C~~~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 242 (263)
|-.+-.|||++|.|..+++++.+.++.
T Consensus 180 ----------dw~~~~ltDGLHlS~~G~~ivf~Ei~k 206 (245)
T KOG3035|consen 180 ----------DWQTSCLTDGLHLSPKGNKIVFDEILK 206 (245)
T ss_pred ----------cHHHHHhccceeeccccchhhHHHHHH
Confidence 111235799999999999999999886
No 37
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=96.30 E-value=0.067 Score=45.17 Aligned_cols=24 Identities=17% Similarity=0.107 Sum_probs=20.9
Q ss_pred eeecCCChhHHHHHHHHHHHhhcC
Q 037515 221 IFWDGVHSSETVNVITGRRAYMAL 244 (263)
Q Consensus 221 ~fwD~~HPT~~~h~~ia~~~~~~~ 244 (263)
..+|++||+.++|+.+|+.+....
T Consensus 185 ~~~Dg~H~n~~Gy~~~a~~l~~~l 208 (216)
T COG2755 185 LTEDGLHPNAKGYQALAEALAEVL 208 (216)
T ss_pred ccCCCCCcCHhhHHHHHHHHHHHH
Confidence 339999999999999999998653
No 38
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.66 E-value=0.23 Score=44.99 Aligned_cols=131 Identities=16% Similarity=0.292 Sum_probs=79.2
Q ss_pred cCceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHhCCc---EEEEecCCCCCcccccccccc
Q 037515 50 SKCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNYGAK---KIALFGIGPLGCAPGPVAMYG 126 (263)
Q Consensus 50 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~GAr---~~~V~nlpplgc~P~~~~~~~ 126 (263)
+-+..+|.+|+||... +.....+ .....+ .=.+.|.+-+.++.+.-.+ +++.+++|+. +
T Consensus 177 ~~a~vVV~lGaND~q~-~~~gd~~---~kf~S~----~W~~eY~kRvd~~l~ia~~~~~~V~WvGmP~~------r---- 238 (354)
T COG2845 177 KPAAVVVMLGANDRQD-FKVGDVY---EKFRSD----EWTKEYEKRVDAILKIAHTHKVPVLWVGMPPF------R---- 238 (354)
T ss_pred CccEEEEEecCCCHHh-cccCCee---eecCch----HHHHHHHHHHHHHHHHhcccCCcEEEeeCCCc------c----
Confidence 4467888999999986 3332211 111111 2344555555555544332 4677777654 2
Q ss_pred CCCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhc-c----CCCcccCCCCCcCcCccCCccCCCC
Q 037515 127 TNGSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFAD-A----SVGIQDDLVTTIIGPCCPVANLPMN 201 (263)
Q Consensus 127 ~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n-~----~yGf~~~~n~~~~~aCcg~~~~g~~ 201 (263)
.+.+|.-...+|...++.++++..+ ++|+++.+.+. . .+|+. .
T Consensus 239 ------~~~l~~dm~~ln~iy~~~vE~~~gk-------~i~i~d~~v~e~G~~f~~~~~D-------------------~ 286 (354)
T COG2845 239 ------KKKLNADMVYLNKIYSKAVEKLGGK-------FIDIWDGFVDEGGKDFVTTGVD-------------------I 286 (354)
T ss_pred ------ccccchHHHHHHHHHHHHHHHhCCe-------EEEecccccccCCceeEEeccc-------------------c
Confidence 2345666779999999888887643 56888866542 1 12221 0
Q ss_pred CccccccCCCCCCCCCCCCeeecCCChhHHHHHHHHHHHhh
Q 037515 202 NGILTCIPFSTSCSIRYANIFWDGVHSSETVNVITGRRAYM 242 (263)
Q Consensus 202 ~~~~~C~~~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 242 (263)
|+ .+-++--=|++|.|.++.+.+|.++.+
T Consensus 287 NG------------q~vrlR~~DGIh~T~~Gkrkla~~~~k 315 (354)
T COG2845 287 NG------------QPVRLRAKDGIHFTKEGKRKLAFYLEK 315 (354)
T ss_pred CC------------ceEEEeccCCceechhhHHHHHHHHHH
Confidence 11 122344469999999999999999865
No 39
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=94.97 E-value=0.91 Score=42.22 Aligned_cols=76 Identities=16% Similarity=0.140 Sum_probs=46.7
Q ss_pred ccHHHHHHHHHHHHHHHHHHhCChhHHHhhccC--ceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHH
Q 037515 19 ISLNGQLQNHKTTVSRIASILGDQESATQHLSK--CLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKL 96 (263)
Q Consensus 19 ~~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~~--sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v 96 (263)
-+|-.|-+...+.+++ ..+.. ..+ -|..||||+||+-+ +-..+ .++...+++--++|.+++
T Consensus 160 ~Dlp~QAr~Lv~rik~---~~~i~------~~~dWKLi~IfIG~ND~c~-~c~~~-------~~~~~~~~~~~~~i~~Al 222 (397)
T KOG3670|consen 160 EDLPDQARDLVSRIKK---DKEIN------MKNDWKLITIFIGTNDLCA-YCEGP-------ETPPSPVDQHKRNIRKAL 222 (397)
T ss_pred hhhHHHHHHHHHHHHh---ccCcc------cccceEEEEEEeccchhhh-hccCC-------CCCCCchhHHHHHHHHHH
Confidence 4666676665544433 22221 222 58999999999975 32210 122334555567789999
Q ss_pred HHHHHhCCcEEEEec
Q 037515 97 KTLHNYGAKKIALFG 111 (263)
Q Consensus 97 ~~L~~~GAr~~~V~n 111 (263)
+.|.+.=-|.+|++-
T Consensus 223 ~~L~~nvPR~iV~lv 237 (397)
T KOG3670|consen 223 EILRDNVPRTIVSLV 237 (397)
T ss_pred HHHHhcCCceEEEEe
Confidence 999988888776653
No 40
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=87.83 E-value=9.7 Score=31.82 Aligned_cols=20 Identities=20% Similarity=0.106 Sum_probs=18.2
Q ss_pred ecCCChhHHHHHHHHHHHhh
Q 037515 223 WDGVHSSETVNVITGRRAYM 242 (263)
Q Consensus 223 wD~~HPT~~~h~~ia~~~~~ 242 (263)
.|++|+.+.+|+.+++.+++
T Consensus 161 ~DgVHwn~~a~r~ls~lll~ 180 (183)
T cd01842 161 RDGVHWNYVAHRRLSNLLLA 180 (183)
T ss_pred CCCcCcCHHHHHHHHHHHHH
Confidence 69999999999999998864
No 41
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=82.96 E-value=12 Score=33.01 Aligned_cols=80 Identities=11% Similarity=0.224 Sum_probs=49.4
Q ss_pred hHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEE
Q 037515 84 YATVLIQQYSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKF 163 (263)
Q Consensus 84 ~~~~~v~~~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i 163 (263)
.++++++.+...++.|.+..-+-=+|+++.|+- ...+-.. .-.-..|..++ +.|+..+.++...+++ +
T Consensus 146 s~~ei~~~l~~~~~~l~~~nP~~kiilTVSPVr---l~~T~~~----~d~~~an~~SK---s~Lr~a~~~l~~~~~~--v 213 (251)
T PF08885_consen 146 SVEEILEDLEAIIDLLRSINPDIKIILTVSPVR---LIATFRD----RDGLVANQYSK---STLRAAAHELVRAFDD--V 213 (251)
T ss_pred CHHHHHHHHHHHHHHHHhhCCCceEEEEeccch---hhccccc----ccchhhhhhhH---HHHHHHHHHHHhcCCC--c
Confidence 356788888888888888876555677777643 3232211 11233455554 3678888888877654 4
Q ss_pred EEEecchhhhhc
Q 037515 164 IYINAYDLLFAD 175 (263)
Q Consensus 164 ~~~D~y~~~~~n 175 (263)
.|+=.|.++++.
T Consensus 214 ~YFPSYEiv~d~ 225 (251)
T PF08885_consen 214 DYFPSYEIVMDE 225 (251)
T ss_pred eEcchHhhccCc
Confidence 566666665553
No 42
>PLN02757 sirohydrochlorine ferrochelatase
Probab=82.11 E-value=4.4 Score=32.93 Aligned_cols=54 Identities=9% Similarity=0.191 Sum_probs=39.3
Q ss_pred HHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEec
Q 037515 92 YSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINA 168 (263)
Q Consensus 92 ~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~ 168 (263)
+.+.|++|.+.|+|+|+| .|.++.... .....+.+.+++++.++|+.+|.+...
T Consensus 60 l~eal~~l~~~g~~~vvV--------vP~FL~~G~---------------H~~~DIp~~v~~~~~~~p~~~i~~~~p 113 (154)
T PLN02757 60 IKDAFGRCVEQGASRVIV--------SPFFLSPGR---------------HWQEDIPALTAEAAKEHPGVKYLVTAP 113 (154)
T ss_pred HHHHHHHHHHCCCCEEEE--------EEhhhcCCc---------------chHhHHHHHHHHHHHHCCCcEEEECCC
Confidence 456677888889999998 577765321 113445778888999999999988654
No 43
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=74.61 E-value=2.7 Score=38.88 Aligned_cols=68 Identities=15% Similarity=0.082 Sum_probs=50.5
Q ss_pred cCceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCccccccc
Q 037515 50 SKCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNYGAKKIALFGIGPLGCAPGPVA 123 (263)
Q Consensus 50 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~ 123 (263)
.+.++.-|+|+||+...-.. ......-..+......+.+++..++.++.-+|+..+.|.++..|....
T Consensus 98 ~~~~~~~~a~gnd~A~gga~------~~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~~v~~~~~~~~l~p~~l~ 165 (370)
T COG3240 98 PNGLYIHWAGGNDLAVGGAR------STEPNTGNSIGASATSLAQQVGAFLAAGQGGFVWPNYPAQGLDPSALY 165 (370)
T ss_pred cccccCcccccccHhhhccc------cccccccccccccccchHHHHHHHHHhcCCccccccccccccCHHHHH
Confidence 56789999999999864322 111111123455667788899999999999999999999999997664
No 44
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=72.73 E-value=22 Score=30.72 Aligned_cols=80 Identities=19% Similarity=0.284 Sum_probs=46.2
Q ss_pred EeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCCcchhHh
Q 037515 57 GFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYI 136 (263)
Q Consensus 57 ~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~ 136 (263)
+.|.+.....|-. .-..++ +.+.+-+.+.++.|...|.|+++++|=. ++
T Consensus 63 ~yG~s~~h~~fpG------Tisl~~----~t~~~~l~di~~sl~~~Gf~~ivivngH----------------gG----- 111 (237)
T PF02633_consen 63 PYGCSPHHMGFPG------TISLSP----ETLIALLRDILRSLARHGFRRIVIVNGH----------------GG----- 111 (237)
T ss_dssp --BB-GCCTTSTT-------BBB-H----HHHHHHHHHHHHHHHHHT--EEEEEESS----------------TT-----
T ss_pred ccccCcccCCCCC------eEEeCH----HHHHHHHHHHHHHHHHcCCCEEEEEECC----------------Hh-----
Confidence 6788777643311 111222 2344445777888889999999998731 11
Q ss_pred hHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhh
Q 037515 137 NKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLF 173 (263)
Q Consensus 137 n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~ 173 (263)
|. ..|+..+.+++.+++++.+..+|.+....
T Consensus 112 N~------~~l~~~~~~l~~~~~~~~v~~~~~~~~~~ 142 (237)
T PF02633_consen 112 NI------AALEAAARELRQEYPGVKVFVINWWQLAE 142 (237)
T ss_dssp HH------HHHHHHHHHHHHHGCC-EEEEEEGGGCSH
T ss_pred HH------HHHHHHHHHHHhhCCCcEEEEeechhccc
Confidence 11 23566677777778899999999987753
No 45
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=72.65 E-value=9.8 Score=27.96 Aligned_cols=52 Identities=15% Similarity=0.248 Sum_probs=34.2
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEe
Q 037515 93 SQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYIN 167 (263)
Q Consensus 93 ~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D 167 (263)
.+.+++|.+.|+++++| .|.++.... .....+...+++++.++|+.++.+.+
T Consensus 47 ~~~l~~l~~~g~~~v~v--------vPlfl~~G~---------------h~~~dip~~~~~~~~~~~~~~i~~~~ 98 (101)
T cd03416 47 AEALDELAAQGATRIVV--------VPLFLLAGG---------------HVKEDIPAALAAARARHPGVRIRYAP 98 (101)
T ss_pred HHHHHHHHHcCCCEEEE--------EeeEeCCCc---------------cccccHHHHHHHHHHHCCCeEEEecC
Confidence 44577788889999988 466664311 11234456666677788998887654
No 46
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the CbiX protein, which functions as a cobalt-chelatase in the anaerobic biosynthesis of cobalamin. It catalyses the insertion of cobalt into sirohydrochlorin. The structure of CbiX from Archaeoglobus fulgidus consists of a central mixed beta-sheet flanked by four alpha-helices, although it is about half the size of other Class II tetrapyrrole chelatases []. The CbiX proteins found in archaea appear to be shorter than those found in eubacteria [].; GO: 0016829 lyase activity, 0046872 metal ion binding, 0009236 cobalamin biosynthetic process; PDB: 2XWQ_C 2DJ5_A 1TJN_A 2XWS_A 3LYH_B 2JH3_D.
Probab=70.95 E-value=3.9 Score=30.34 Aligned_cols=53 Identities=11% Similarity=0.123 Sum_probs=35.8
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEec
Q 037515 93 SQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINA 168 (263)
Q Consensus 93 ~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~ 168 (263)
.+.+++|.+.|+++|+| .|.++... . ....-+.+.+++++.++|+.++.+...
T Consensus 40 ~~~l~~l~~~g~~~ivv--------vP~fL~~G--------~-------h~~~DIp~~l~~~~~~~~~~~v~~~~p 92 (105)
T PF01903_consen 40 EEALERLVAQGARRIVV--------VPYFLFPG--------Y-------HVKRDIPEALAEARERHPGIEVRVAPP 92 (105)
T ss_dssp HHCCHHHHCCTCSEEEE--------EEESSSSS--------H-------HHHCHHHHHHCHHHHCSTTEEEEE---
T ss_pred HHHHHHHHHcCCCeEEE--------EeeeecCc--------c-------chHhHHHHHHHHHHhhCCceEEEECCC
Confidence 45568888889999988 47776431 0 111236778888999999999887654
No 47
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=68.21 E-value=14 Score=33.62 Aligned_cols=65 Identities=14% Similarity=0.174 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 037515 86 TVLIQQYSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIY 165 (263)
Q Consensus 86 ~~~v~~~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~ 165 (263)
..-++.+.+.++++.++|.+.|+++++|+. ..+. .....|. |.-++..+..+++.+|+.-+ +
T Consensus 57 r~sid~l~~~~~~~~~~Gi~~v~lFgv~~~-Kd~~-----------gs~A~~~-----~g~v~~air~iK~~~pdl~v-i 118 (322)
T PRK13384 57 RLPESALADEIERLYALGIRYVMPFGISHH-KDAK-----------GSDTWDD-----NGLLARMVRTIKAAVPEMMV-I 118 (322)
T ss_pred eECHHHHHHHHHHHHHcCCCEEEEeCCCCC-CCCC-----------cccccCC-----CChHHHHHHHHHHHCCCeEE-E
Confidence 345788899999999999999999998642 2211 1111111 33456677788999998654 4
Q ss_pred Eec
Q 037515 166 INA 168 (263)
Q Consensus 166 ~D~ 168 (263)
.|+
T Consensus 119 ~DV 121 (322)
T PRK13384 119 PDI 121 (322)
T ss_pred eee
Confidence 555
No 48
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=66.00 E-value=29 Score=31.53 Aligned_cols=65 Identities=9% Similarity=0.188 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 037515 86 TVLIQQYSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIY 165 (263)
Q Consensus 86 ~~~v~~~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~ 165 (263)
..-++.+.+.++++.++|.+.|+++++|+. ..+. ..+..|. |.-++..+..+++++|+.-+ +
T Consensus 47 r~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~-Kd~~-----------gs~A~~~-----~g~v~~air~iK~~~p~l~v-i 108 (314)
T cd00384 47 RLSVDSLVEEAEELADLGIRAVILFGIPEH-KDEI-----------GSEAYDP-----DGIVQRAIRAIKEAVPELVV-I 108 (314)
T ss_pred eeCHHHHHHHHHHHHHCCCCEEEEECCCCC-CCCC-----------cccccCC-----CChHHHHHHHHHHhCCCcEE-E
Confidence 345788999999999999999999998642 2211 1111111 23456677778889998654 4
Q ss_pred Eec
Q 037515 166 INA 168 (263)
Q Consensus 166 ~D~ 168 (263)
.|+
T Consensus 109 ~Dv 111 (314)
T cd00384 109 TDV 111 (314)
T ss_pred Eee
Confidence 555
No 49
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=64.03 E-value=2.2 Score=35.54 Aligned_cols=116 Identities=19% Similarity=0.255 Sum_probs=44.5
Q ss_pred cCceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHhC-CcEEEEecCCCCCccccccccccCC
Q 037515 50 SKCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNYG-AKKIALFGIGPLGCAPGPVAMYGTN 128 (263)
Q Consensus 50 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~G-Ar~~~V~nlpplgc~P~~~~~~~~~ 128 (263)
..++|++..|.| +. ++ .+..++...|++|.+.= -.-|+++...+ +...
T Consensus 59 ~a~~~~ld~~~N------~~-----------~~----~~~~~~~~fv~~iR~~hP~tPIllv~~~~--~~~~-------- 107 (178)
T PF14606_consen 59 DADLIVLDCGPN------MS-----------PE----EFRERLDGFVKTIREAHPDTPILLVSPIP--YPAG-------- 107 (178)
T ss_dssp --SEEEEEESHH------CC-----------TT----THHHHHHHHHHHHHTT-SSS-EEEEE------TTT--------
T ss_pred CCCEEEEEeecC------CC-----------HH----HHHHHHHHHHHHHHHhCCCCCEEEEecCC--cccc--------
Confidence 458999999999 11 11 23455566666666543 44555554221 1111
Q ss_pred CCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecchhhhhccCCCcccCCCCCcCcCccCCccCCCCCcccccc
Q 037515 129 GSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAYDLLFADASVGIQDDLVTTIIGPCCPVANLPMNNGILTCI 208 (263)
Q Consensus 129 ~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y~~~~~n~~yGf~~~~n~~~~~aCcg~~~~g~~~~~~~C~ 208 (263)
............+|+.+++.+++++++ .+-++.|+|--.++ |.
T Consensus 108 --~~~~~~~~~~~~~~~~~r~~v~~l~~~-g~~nl~~l~g~~ll--------------------------g~-------- 150 (178)
T PF14606_consen 108 --YFDNSRGETVEEFREALREAVEQLRKE-GDKNLYYLDGEELL--------------------------GD-------- 150 (178)
T ss_dssp --TS--TTS--HHHHHHHHHHHHHHHHHT-T-TTEEEE-HHHCS------------------------------------
T ss_pred --ccCchHHHHHHHHHHHHHHHHHHHHHc-CCCcEEEeCchhhc--------------------------Cc--------
Confidence 112222345778999999999999653 34456666633210 10
Q ss_pred CCCCCCCCCCCCeeecCCChhHHHHHHHHHHHhh
Q 037515 209 PFSTSCSIRYANIFWDGVHSSETVNVITGRRAYM 242 (263)
Q Consensus 209 ~~~~~C~~p~~y~fwD~~HPT~~~h~~ia~~~~~ 242 (263)
+.-..-|++|||+.+|..+|+.+..
T Consensus 151 ---------d~e~tvDgvHP~DlG~~~~a~~l~~ 175 (178)
T PF14606_consen 151 ---------DHEATVDGVHPNDLGMMRMADALEP 175 (178)
T ss_dssp ----------------------------------
T ss_pred ---------ccccccccccccccccccccccccc
Confidence 0113479999999999999997743
No 50
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=62.39 E-value=18 Score=28.55 Aligned_cols=25 Identities=16% Similarity=0.060 Sum_probs=20.4
Q ss_pred CCCeeecCCChhHHHHHHHHHHHhh
Q 037515 218 YANIFWDGVHSSETVNVITGRRAYM 242 (263)
Q Consensus 218 ~~y~fwD~~HPT~~~h~~ia~~~~~ 242 (263)
+.|++-|.+||..+|+-.+-+.+..
T Consensus 101 ~~yfm~D~iHlgw~GWv~vd~~i~~ 125 (130)
T PF04914_consen 101 EPYFMQDTIHLGWKGWVYVDQAIYP 125 (130)
T ss_dssp STTSBSSSSSB-THHHHHHHHHHHH
T ss_pred CCceeeecccCchhhHHHHHHHHHH
Confidence 5789999999999999888877653
No 51
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=61.46 E-value=35 Score=31.05 Aligned_cols=66 Identities=12% Similarity=0.197 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEecCCC-CCccccccccccCCCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 037515 86 TVLIQQYSQKLKTLHNYGAKKIALFGIGP-LGCAPGPVAMYGTNGSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFI 164 (263)
Q Consensus 86 ~~~v~~~~~~v~~L~~~GAr~~~V~nlpp-lgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~ 164 (263)
..-++.+.+.++++.++|.+.|++++++| --..+.. ....|. |.-++..+..+++++|+.-+
T Consensus 50 r~s~d~l~~~v~~~~~~Gi~~v~lFgv~~~~~KD~~g-----------s~A~~~-----~g~v~~air~iK~~~p~l~v- 112 (320)
T cd04823 50 RLSIDELLKEAEEAVDLGIPAVALFPVTPPELKSEDG-----------SEAYNP-----DNLVCRAIRAIKEAFPELGI- 112 (320)
T ss_pred eeCHHHHHHHHHHHHHcCCCEEEEecCCCcccCCccc-----------ccccCC-----CChHHHHHHHHHHhCCCcEE-
Confidence 34578899999999999999999999843 2122211 111111 23446677778889998644
Q ss_pred EEec
Q 037515 165 YINA 168 (263)
Q Consensus 165 ~~D~ 168 (263)
+.|+
T Consensus 113 i~DV 116 (320)
T cd04823 113 ITDV 116 (320)
T ss_pred EEee
Confidence 4565
No 52
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=61.38 E-value=38 Score=30.84 Aligned_cols=67 Identities=10% Similarity=0.113 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEecCCCCC-ccccccccccCCCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 037515 86 TVLIQQYSQKLKTLHNYGAKKIALFGIGPLG-CAPGPVAMYGTNGSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFI 164 (263)
Q Consensus 86 ~~~v~~~~~~v~~L~~~GAr~~~V~nlpplg-c~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~ 164 (263)
..-++.+.+.++++.++|.+.|+++++|+-. ..+.. ..+..| =|.-++..+..+++++|+.-+
T Consensus 47 r~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~~~Kd~~~----------gs~a~~-----~~g~v~~air~iK~~~pdl~v- 110 (320)
T cd04824 47 RYGVNRLEEFLRPLVAKGLRSVILFGVPLKPGKDDRS----------GSAADD-----EDGPVIQAIKLIREEFPELLI- 110 (320)
T ss_pred eeCHHHHHHHHHHHHHCCCCEEEEeCCCccccCCcCc----------cccccC-----CCChHHHHHHHHHHhCCCcEE-
Confidence 3457888999999999999999999997432 22220 001111 122345667778888998644
Q ss_pred EEec
Q 037515 165 YINA 168 (263)
Q Consensus 165 ~~D~ 168 (263)
+.|+
T Consensus 111 i~Dv 114 (320)
T cd04824 111 ACDV 114 (320)
T ss_pred EEee
Confidence 4555
No 53
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=60.80 E-value=21 Score=32.50 Aligned_cols=65 Identities=14% Similarity=0.237 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 037515 86 TVLIQQYSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIY 165 (263)
Q Consensus 86 ~~~v~~~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~ 165 (263)
..-++.+.+.++++.++|.+.|+++++|.. ..+. .....|. |.-+...+..+++++|+.-+ +
T Consensus 55 r~s~d~l~~~v~~~~~~Gi~av~LFgv~~~-Kd~~-----------gs~A~~~-----~g~v~rair~iK~~~p~l~v-i 116 (323)
T PRK09283 55 RLSIDLLVKEAEEAVELGIPAVALFGVPEL-KDED-----------GSEAYNP-----DGLVQRAIRAIKKAFPELGV-I 116 (323)
T ss_pred eeCHHHHHHHHHHHHHCCCCEEEEeCcCCC-CCcc-----------cccccCC-----CCHHHHHHHHHHHhCCCcEE-E
Confidence 345788899999999999999999998432 2211 1111111 23345677788889998654 4
Q ss_pred Eec
Q 037515 166 INA 168 (263)
Q Consensus 166 ~D~ 168 (263)
.|+
T Consensus 117 ~DV 119 (323)
T PRK09283 117 TDV 119 (323)
T ss_pred Eee
Confidence 565
No 54
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=59.91 E-value=34 Score=25.70 Aligned_cols=51 Identities=18% Similarity=0.326 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEe
Q 037515 92 YSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYIN 167 (263)
Q Consensus 92 ~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D 167 (263)
+.+.+++|.+.|+++++| .|.++... . .. +.+...+.+++.+ |+.++.+..
T Consensus 47 ~~~~l~~l~~~g~~~i~v--------vP~fL~~G--------~-------h~-~~i~~~~~~~~~~-~~~~i~~~~ 97 (117)
T cd03414 47 LPEALERLRALGARRVVV--------LPYLLFTG--------V-------LM-DRIEEQVAELAAE-PGIEFVLAP 97 (117)
T ss_pred HHHHHHHHHHcCCCEEEE--------EechhcCC--------c-------hH-HHHHHHHHHHHhC-CCceEEECC
Confidence 456677788899999988 46665431 0 11 2345567777777 877776543
No 55
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=54.48 E-value=52 Score=25.53 Aligned_cols=52 Identities=17% Similarity=0.130 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEe
Q 037515 90 QQYSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYIN 167 (263)
Q Consensus 90 ~~~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D 167 (263)
..+.+.+++|.+.|.++|+|. |.++.. + ..| ..|.+.+++++ +|..++.+..
T Consensus 56 p~~~eaL~~l~~~G~~~V~V~--------Pl~l~~----G-----------~e~-~di~~~v~~~~--~~~~~i~~g~ 107 (127)
T cd03412 56 DTPEEALAKLAADGYTEVIVQ--------SLHIIP----G-----------EEY-EKLKREVDAFK--KGFKKIKLGR 107 (127)
T ss_pred CCHHHHHHHHHHCCCCEEEEE--------eCeeEC----c-----------HHH-HHHHHHHHHHh--CCCceEEEcc
Confidence 456788999999999999995 444432 1 023 45666777776 5676776654
No 56
>PRK06520 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=50.63 E-value=47 Score=30.84 Aligned_cols=36 Identities=17% Similarity=0.263 Sum_probs=29.2
Q ss_pred ChhhhHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCC
Q 037515 80 PPDQYATVLIQQYSQKLKTLHNYGAKKIALFGIGPLG 116 (263)
Q Consensus 80 ~~~~~~~~~v~~~~~~v~~L~~~GAr~~~V~nlpplg 116 (263)
+.++++.+++..+.+.++.|+++|+|.|-+ +=|.+.
T Consensus 160 ~~~~~~~dlA~al~~Ei~~L~~aG~~~IQi-Dep~l~ 195 (368)
T PRK06520 160 DLDDYFDDLAKTWRDAIKAFYDAGCRYLQL-DDTVWA 195 (368)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEe-cCcchh
Confidence 356899999999999999999999998655 445443
No 57
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=49.46 E-value=39 Score=30.86 Aligned_cols=65 Identities=14% Similarity=0.250 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEe
Q 037515 88 LIQQYSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYIN 167 (263)
Q Consensus 88 ~v~~~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D 167 (263)
-++.+.+.++++.++|.+.|+++++.+ |..+... .....|. |.-++..+..+++.+|++-+ +.|
T Consensus 55 sid~l~~~v~~~~~~GI~~v~lFgvi~----~~~Kd~~------gs~a~~~-----~g~v~~air~iK~~~pdl~v-i~D 118 (324)
T PF00490_consen 55 SIDSLVKEVEEAVDLGIRAVILFGVID----PSKKDEE------GSEAYNP-----DGLVQRAIRAIKKAFPDLLV-ITD 118 (324)
T ss_dssp EHHHHHHHHHHHHHTT--EEEEEEE-S----CSC-BSS-------GGGGST-----TSHHHHHHHHHHHHSTTSEE-EEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEeeCC----cccCCcc------hhcccCC-----CChHHHHHHHHHHhCCCcEE-EEe
Confidence 468889999999999999999998832 2222111 1111111 23345677778889999644 566
Q ss_pred c
Q 037515 168 A 168 (263)
Q Consensus 168 ~ 168 (263)
+
T Consensus 119 v 119 (324)
T PF00490_consen 119 V 119 (324)
T ss_dssp E
T ss_pred c
Confidence 5
No 58
>PF08029 HisG_C: HisG, C-terminal domain; InterPro: IPR013115 ATP phosphoribosyltransferase (2.4.2.17 from EC) is the enzyme that catalyzes the first step in the biosynthesis of histidine in bacteria, fungi and plants as shown below. It is a member of the larger phosphoribosyltransferase superfamily of enzymes which catalyse the condensation of 5-phospho-alpha-D-ribose 1-diphosphate with nitrogenous bases in the presence of divalent metal ions []. ATP + 5-phospho-alpha-D-ribose 1-diphosphate = 1-(5-phospho-D-ribosyl)-ATP + diphosphate Histidine biosynthesis is an energetically expensive process and ATP phosphoribosyltransferase activity is subject to control at several levels. Transcriptional regulation is based primarily on nutrient conditions and determines the amount of enzyme present in the cell, while feedback inihibition rapidly modulates activity in response to cellular conditions. The enzyme has been shown to be inhibited by 1-(5-phospho-D-ribosyl)-ATP, histidine, ppGpp (a signal associated with adverse environmental conditions) and ADP and AMP (which reflect the overall energy status of the cell). As this pathway of histidine biosynthesis is present only in prokayrotes, plants and fungi, this enzyme is a promising target for the development of novel antimicrobial compounds and herbicides. This entry represents the C-terminal portion of ATP phosphoribosyltransferase. The enzyme itself exists in equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates [, ]. Interconversion between the various forms is largely reversible and is influenced by the binding of the natural substrates and inhibitors of the enzyme. This domain is not directly involved in catalysis but appears to be responsible for the formation of hexamers induced by the binding of inhibitors to the enzyme, thus regulating activity.; GO: 0000287 magnesium ion binding, 0003879 ATP phosphoribosyltransferase activity, 0000105 histidine biosynthetic process, 0005737 cytoplasm; PDB: 1Q1K_A 1H3D_A 2VD3_B 1NH7_A 1NH8_A.
Probab=43.93 E-value=21 Score=25.30 Aligned_cols=21 Identities=24% Similarity=0.295 Sum_probs=16.0
Q ss_pred HHHHHHHHHHhCCcEEEEecC
Q 037515 92 YSQKLKTLHNYGAKKIALFGI 112 (263)
Q Consensus 92 ~~~~v~~L~~~GAr~~~V~nl 112 (263)
+.+.+.+|.++||+-|+|..+
T Consensus 52 ~~~~~~~Lk~~GA~~Ilv~pi 72 (75)
T PF08029_consen 52 VWDLMDKLKAAGASDILVLPI 72 (75)
T ss_dssp HHHHHHHHHCTT-EEEEEEE-
T ss_pred HHHHHHHHHHcCCCEEEEEec
Confidence 456778899999999999765
No 59
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=41.92 E-value=54 Score=29.75 Aligned_cols=69 Identities=12% Similarity=0.181 Sum_probs=43.7
Q ss_pred hHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEE
Q 037515 84 YATVLIQQYSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKF 163 (263)
Q Consensus 84 ~~~~~v~~~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i 163 (263)
....-++.+.+.++++.++|.+-|+++++|+-+ .+...+ .. +-.-|..++..+..+++.+|+. +
T Consensus 55 v~r~s~d~l~~~~~~~~~lGi~av~LFgvp~~~----~Kd~~g------s~-----A~~~~givqravr~ik~~~p~l-~ 118 (330)
T COG0113 55 VYRYSLDRLVEEAEELVDLGIPAVILFGVPDDS----KKDETG------SE-----AYDPDGIVQRAVRAIKEAFPEL-V 118 (330)
T ss_pred ceeccHHHHHHHHHHHHhcCCCEEEEeCCCccc----ccCccc------cc-----ccCCCChHHHHHHHHHHhCCCe-E
Confidence 334458889999999999999999999998532 111110 00 0011234566777788888854 3
Q ss_pred EEEec
Q 037515 164 IYINA 168 (263)
Q Consensus 164 ~~~D~ 168 (263)
+..|+
T Consensus 119 iitDv 123 (330)
T COG0113 119 VITDV 123 (330)
T ss_pred EEeee
Confidence 34554
No 60
>TIGR03455 HisG_C-term ATP phosphoribosyltransferase, C-terminal domain. This domain corresponds to the C-terminal third of the HisG protein. It is absent in many lineages.
Probab=41.79 E-value=33 Score=25.72 Aligned_cols=23 Identities=22% Similarity=0.379 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHhCCcEEEEecC
Q 037515 90 QQYSQKLKTLHNYGAKKIALFGI 112 (263)
Q Consensus 90 ~~~~~~v~~L~~~GAr~~~V~nl 112 (263)
+.+...+.+|.++||+-|+|..+
T Consensus 74 ~~v~~~~~~Lk~~GA~~Ilv~~i 96 (100)
T TIGR03455 74 KVVNELIDKLKAAGARDILVLPI 96 (100)
T ss_pred HHHHHHHHHHHHcCCCeEEEech
Confidence 45678889999999999999754
No 61
>KOG4079 consensus Putative mitochondrial ribosomal protein mRpS25 [Translation, ribosomal structure and biogenesis]
Probab=40.46 E-value=12 Score=29.68 Aligned_cols=17 Identities=18% Similarity=0.425 Sum_probs=14.6
Q ss_pred HhCCcEEEEecCCCCCc
Q 037515 101 NYGAKKIALFGIGPLGC 117 (263)
Q Consensus 101 ~~GAr~~~V~nlpplgc 117 (263)
+.|||.||++|+|.+..
T Consensus 42 ~~GARdFVfwNipQiQy 58 (169)
T KOG4079|consen 42 QSGARDFVFWNIPQIQY 58 (169)
T ss_pred ccCccceEEecchhhcc
Confidence 57999999999998763
No 62
>PRK09121 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=40.04 E-value=78 Score=29.03 Aligned_cols=55 Identities=11% Similarity=0.093 Sum_probs=38.2
Q ss_pred ChhhhHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCCcchhHhhHHHHHHHHHHH
Q 037515 80 PPDQYATVLIQQYSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYINKAIQLFNTNLK 148 (263)
Q Consensus 80 ~~~~~~~~~v~~~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~ 148 (263)
+.++++.+++..+.+.++.|+++|+|.+-+= =|.+.. .|.+.....++.+|..+.
T Consensus 146 ~~~el~~dlA~al~~Ei~~L~~aG~~~IQiD-eP~l~~-------------~~~~~~~~~v~~~n~~~~ 200 (339)
T PRK09121 146 SREKLAWEFAKILNQEAKELEAAGVDIIQFD-EPAFNV-------------FFDEVNDWGVAALERAIE 200 (339)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEec-ccHHhh-------------hhHHHHHHHHHHHHHHHc
Confidence 4568899999999999999999999986653 333321 243445555666666654
No 63
>PF02896 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel domain; InterPro: IPR000121 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ]. All these enzymes share the same catalytic mechanism: they bind PEP and transfer the phosphoryl group from it to a histidine residue. The sequence around that residue is highly conserved. This domain is often found associated with the pyruvate phosphate dikinase, PEP/pyruvate-binding domain (IPR002192 from INTERPRO) at its N terminus and the PEP-utilizing enzyme mobile domain.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016310 phosphorylation; PDB: 2HRO_A 2OLS_A 2DIK_A 2R82_A 1JDE_A 1DIK_A 1GGO_A 1KBL_A 1KC7_A 2BG5_B ....
Probab=37.84 E-value=62 Score=29.17 Aligned_cols=17 Identities=24% Similarity=0.294 Sum_probs=12.9
Q ss_pred cCceEEEEeccchhhhh
Q 037515 50 SKCLYTVGFGSNDYINN 66 (263)
Q Consensus 50 ~~sL~~i~iG~ND~~~~ 66 (263)
.+-+=+++||.||....
T Consensus 195 ~~~~DF~SIGtNDLtQy 211 (293)
T PF02896_consen 195 AKEVDFFSIGTNDLTQY 211 (293)
T ss_dssp HTTSSEEEEEHHHHHHH
T ss_pred HHHCCEEEEChhHHHHH
Confidence 34466889999999863
No 64
>COG1903 CbiD Cobalamin biosynthesis protein CbiD [Coenzyme metabolism]
Probab=34.62 E-value=3.3e+02 Score=25.46 Aligned_cols=85 Identities=18% Similarity=0.145 Sum_probs=55.2
Q ss_pred ceecccccCCcccccHHHHHHHHHHHHHHHHHHhCChhHHHhhccCceEEEEeccc--hhhhhhcCCCCCCCCCCCChhh
Q 037515 6 WATIESKIRLGVVISLNGQLQNHKTTVSRIASILGDQESATQHLSKCLYTVGFGSN--DYINNYLLPQFYPTSRQYPPDQ 83 (263)
Q Consensus 6 ~~~~~t~~~~~~~~~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~~sL~~i~iG~N--D~~~~~~~~~~~~~~~~~~~~~ 83 (263)
.||..||+ -.|+|-..++..+...++..+.. -. .-.++..|.+ ||...++. .++.
T Consensus 171 SILGTTGI--v~P~S~~a~~~si~~~l~~~r~~----------~~-~~iv~~~Gn~g~~~a~~~~~----------~~~~ 227 (367)
T COG1903 171 SILGTTGI--VEPMSEEAYLASIRSELDVARAA----------GL-DHVVFCPGNTGEDYARKLFI----------LPEQ 227 (367)
T ss_pred EeecCCcc--cCcCChHHHHHHHHHHHHHHHhc----------CC-cEEEEccChhHHHHHHHhcC----------CchH
Confidence 46777875 36888888988887766543221 11 2344556644 44443332 2233
Q ss_pred hHHHHHHHHHHHHHHHHHhCCcEEEEecCC
Q 037515 84 YATVLIQQYSQKLKTLHNYGAKKIALFGIG 113 (263)
Q Consensus 84 ~~~~~v~~~~~~v~~L~~~GAr~~~V~nlp 113 (263)
.+-.+.+-+-..|+...++|.+++++++.|
T Consensus 228 ~~v~~~n~vG~~l~~a~~~~~~~i~i~G~p 257 (367)
T COG1903 228 AIVKMGNFVGSMLKEARELGVKEILIFGHP 257 (367)
T ss_pred HHhhHHHHHHHHHHHHHhcCCCEEEEEcCh
Confidence 445566777888888889999999999987
No 65
>COG1031 Uncharacterized Fe-S oxidoreductase [Energy production and conversion]
Probab=32.12 E-value=1.7e+02 Score=28.42 Aligned_cols=69 Identities=17% Similarity=0.193 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEec
Q 037515 89 IQQYSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINA 168 (263)
Q Consensus 89 v~~~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~ 168 (263)
.+.+...|+.||++|+|+|=+ |+-|-+..-.+.+.++-...-|- +.|.++....+..-|+.+.+.+|=
T Consensus 217 ~e~Vv~EVkaLY~~GvrhFRl------GRQ~difsy~~~~~g~e~P~PnP------ealekL~~Gir~~AP~l~tLHiDN 284 (560)
T COG1031 217 PEDVVEEVKALYRAGVRHFRL------GRQADIFSYGADDNGGEVPRPNP------EALEKLFRGIRNVAPNLKTLHIDN 284 (560)
T ss_pred HHHHHHHHHHHHHhccceeee------ccccceeeecccccCCCCCCCCH------HHHHHHHHHHHhhCCCCeeeeecC
Confidence 455677889999999999965 33332222111111111333231 223333444455558888888775
Q ss_pred c
Q 037515 169 Y 169 (263)
Q Consensus 169 y 169 (263)
-
T Consensus 285 a 285 (560)
T COG1031 285 A 285 (560)
T ss_pred C
Confidence 3
No 66
>PF08331 DUF1730: Domain of unknown function (DUF1730); InterPro: IPR013542 This domain of unknown function occurs in iron-sulphur cluster-binding proteins together with the 4Fe-4S binding domain (IPR001450 from INTERPRO).
Probab=31.31 E-value=1.3e+02 Score=21.13 Aligned_cols=65 Identities=12% Similarity=0.198 Sum_probs=31.7
Q ss_pred hCCcEEEEecCCCCCccccccccccCCCCcchhHhhHH---HHHHHHHHHHHHHHHHhhCCCcEEE-EEe
Q 037515 102 YGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYINKA---IQLFNTNLKTLVDDLNNQFRDAKFI-YIN 167 (263)
Q Consensus 102 ~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~n~~---~~~fN~~L~~~l~~l~~~~p~~~i~-~~D 167 (263)
-|||.|+++.+|=..-.|...... ....+....+-.- -...-++|+++.+.|+++.|+.++. ++|
T Consensus 9 p~arSvIv~a~~Y~~~~~~~~~~~-~~~~g~iarYA~G~DYH~vlk~~L~~l~~~i~~~~~~~~~r~~VD 77 (78)
T PF08331_consen 9 PGARSVIVLAFPYYPEPPPPPPPP-GPGRGRIARYAWGRDYHKVLKKKLEQLAEWIRELGPDFEYRIFVD 77 (78)
T ss_pred CCCcEEEEEEccCCCccccccccC-CCCCeeEeehhccCChHHHHHHHHHHHHHHHHHHCCCCCeEEeec
Confidence 489999999876322001000000 0112223322221 2223357777777778888885432 355
No 67
>PRK06233 hypothetical protein; Provisional
Probab=30.88 E-value=74 Score=29.55 Aligned_cols=35 Identities=26% Similarity=0.310 Sum_probs=28.7
Q ss_pred ChhhhHHHHHHHHHHHHHHHHHhCCcEEEEecCCCC
Q 037515 80 PPDQYATVLIQQYSQKLKTLHNYGAKKIALFGIGPL 115 (263)
Q Consensus 80 ~~~~~~~~~v~~~~~~v~~L~~~GAr~~~V~nlppl 115 (263)
+.++++.+++..+...++.|+++|+|.+-+= =|.+
T Consensus 161 ~~eel~~dlA~a~~~Ei~~L~~aG~~~IQiD-eP~~ 195 (372)
T PRK06233 161 SWDDYLDDLAQAYHDTIQHFYDLGARYIQLD-DTTW 195 (372)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEc-CCCH
Confidence 3568999999999999999999999986654 3443
No 68
>TIGR01091 upp uracil phosphoribosyltransferase. that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.
Probab=30.70 E-value=1.6e+02 Score=24.90 Aligned_cols=24 Identities=33% Similarity=0.361 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHhCCcEEEEecC
Q 037515 89 IQQYSQKLKTLHNYGAKKIALFGI 112 (263)
Q Consensus 89 v~~~~~~v~~L~~~GAr~~~V~nl 112 (263)
-..+...++.|.+.||+++.+..+
T Consensus 135 G~Tl~~ai~~L~~~G~~~I~v~~l 158 (207)
T TIGR01091 135 GGTMIAALDLLKKRGAKKIKVLSI 158 (207)
T ss_pred hHHHHHHHHHHHHcCCCEEEEEEE
Confidence 346788999999999999888765
No 69
>cd03311 CIMS_C_terminal_like CIMS - Cobalamine-independent methonine synthase, or MetE, C-terminal domain_like. Many members have been characterized as 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferases, EC:2.1.1.14, mostly from bacteria and plants. This enzyme catalyses the last step in the production of methionine by transferring a methyl group from 5-methyltetrahydrofolate to L-homocysteine without using an intermediate methyl carrier. The active enzyme has a dual (beta-alpha)8-barrel structure, and this model covers the C-terminal barrel, and a few single-barrel sequences most similar to the C-terminal barrel. It is assumed that the homologous N-terminal barrel has evolved from the C-terminus via gene duplication and has subsequently lost binding sites, and it seems as if the two barrels forming the active enzyme may sometimes reside on different polypeptides. The C-terminal domain incorporates the Zinc ion, which binds and activates homocysteine. Sidechains from
Probab=30.29 E-value=1.8e+02 Score=26.18 Aligned_cols=38 Identities=13% Similarity=0.177 Sum_probs=29.7
Q ss_pred ChhhhHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCcc
Q 037515 80 PPDQYATVLIQQYSQKLKTLHNYGAKKIALFGIGPLGCA 118 (263)
Q Consensus 80 ~~~~~~~~~v~~~~~~v~~L~~~GAr~~~V~nlpplgc~ 118 (263)
+..+++..++..+...++.|+++|++ ++-++=|.++..
T Consensus 145 ~~~el~~~la~~~~~e~~~l~~aG~~-~iQiDEP~l~~~ 182 (332)
T cd03311 145 SREELAMDLALALREEIRDLYDAGCR-YIQIDEPALAEG 182 (332)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCC-EEEeecchhhcc
Confidence 45578899999999999999999995 666665555443
No 70
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=29.65 E-value=1.1e+02 Score=24.07 Aligned_cols=27 Identities=15% Similarity=0.139 Sum_probs=23.6
Q ss_pred hhHhhHHHHHHHHHHHHHHHHHHhhCC
Q 037515 133 VDYINKAIQLFNTNLKTLVDDLNNQFR 159 (263)
Q Consensus 133 ~~~~n~~~~~fN~~L~~~l~~l~~~~p 159 (263)
.+..+.++..||..|.+.|.++.+++.
T Consensus 70 e~q~e~lt~rF~~aL~~~L~~yq~~H~ 96 (128)
T PRK13717 70 EAQSKALSARFNTALEASLQAWQQKHH 96 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 466788999999999999999998763
No 71
>cd00419 Ferrochelatase_C Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=29.59 E-value=1.7e+02 Score=22.88 Aligned_cols=36 Identities=17% Similarity=0.207 Sum_probs=24.2
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCCcchhHhhHHHHH
Q 037515 93 SQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYINKAIQL 142 (263)
Q Consensus 93 ~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~n~~~~~ 142 (263)
.+.+++|.+.|+|+++|+ .|.+.. .|.+.+-++-..
T Consensus 80 ~~~l~~l~~~G~~~i~v~-------p~gF~~-------D~~Etl~di~~e 115 (135)
T cd00419 80 DDALEELAKEGVKNVVVV-------PIGFVS-------DHLETLYELDIE 115 (135)
T ss_pred HHHHHHHHHcCCCeEEEE-------CCcccc-------ccHHHHHHHHHH
Confidence 556788889999999996 222433 477776665433
No 72
>COG1015 DeoB Phosphopentomutase [Carbohydrate transport and metabolism]
Probab=29.20 E-value=3.4e+02 Score=25.49 Aligned_cols=95 Identities=14% Similarity=0.157 Sum_probs=56.4
Q ss_pred EEEEec-cchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCCcc
Q 037515 54 YTVGFG-SNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSAC 132 (263)
Q Consensus 54 ~~i~iG-~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c 132 (263)
=++.|| .+|+++..-.. ... -.....+-+...++.+-.++-.-|++.|+-+..-.=-.+ + -
T Consensus 239 ~vi~IGKI~DI~~~~Git------~~~----~~~~n~~~~d~tl~~~~~~~~~~~vFtNlVdfD~~yGHR-------r-D 300 (397)
T COG1015 239 PVIAIGKIADIYAGQGIT------EKV----KAVSNMDGMDVTLEEMKTAEFNGLVFTNLVDFDSLYGHR-------R-D 300 (397)
T ss_pred ceEEEeeHHhhhcccccc------ccc----cCCCcHHHHHHHHHHHhcCCCCcEEEEeeeecccccccc-------c-c
Confidence 356677 88987532211 000 011233445556666666777789999997765321111 1 2
Q ss_pred hhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEec
Q 037515 133 VDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINA 168 (263)
Q Consensus 133 ~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~ 168 (263)
..-+.+..+.|.++|.+.++.|+. -|+-|+.+|-
T Consensus 301 v~gYa~aLe~FD~rL~e~~~~l~e--dDlLiiTADH 334 (397)
T COG1015 301 VAGYAAALEEFDRRLPELIENLRE--DDLLIITADH 334 (397)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCC--CCEEEEecCC
Confidence 344556778999999999998875 2555655553
No 73
>PF06908 DUF1273: Protein of unknown function (DUF1273); InterPro: IPR024718 This entry represents a functionally uncharacterised domain.; PDB: 2NX2_A.
Probab=28.14 E-value=1.5e+02 Score=24.57 Aligned_cols=60 Identities=18% Similarity=0.284 Sum_probs=35.6
Q ss_pred hHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEE
Q 037515 84 YATVLIQQYSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKF 163 (263)
Q Consensus 84 ~~~~~v~~~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i 163 (263)
-+..+-..+.+.|.+|++.|.+.|+.-+ .+| .+ .+ -.+.+-+|++++|++++
T Consensus 23 ~~~~ik~~L~~~i~~lie~G~~~fi~Gg--alG----------------~D---~w-------aae~vl~LK~~yp~ikL 74 (177)
T PF06908_consen 23 KIQVIKKALKKQIIELIEEGVRWFITGG--ALG----------------VD---LW-------AAEVVLELKKEYPEIKL 74 (177)
T ss_dssp HHHHHHHHHHHHHHHHHTTT--EEEE-----TT----------------HH---HH-------HHHHHHTTTTT-TT-EE
T ss_pred hHHHHHHHHHHHHHHHHHCCCCEEEECC--ccc----------------HH---HH-------HHHHHHHHHhhhhheEE
Confidence 4566778889999999999999887742 111 11 11 13456678888999888
Q ss_pred EEEecchh
Q 037515 164 IYINAYDL 171 (263)
Q Consensus 164 ~~~D~y~~ 171 (263)
..+=-|.-
T Consensus 75 ~~v~Pf~~ 82 (177)
T PF06908_consen 75 ALVLPFEN 82 (177)
T ss_dssp EEEESSB-
T ss_pred EEEEcccc
Confidence 77655443
No 74
>PF07555 NAGidase: beta-N-acetylglucosaminidase ; InterPro: IPR011496 This family consists of both eukaryotic and prokaryotic hyaluronidases. Human Q9HAR0 from SWISSPROT is expressed during meningioma []. Clostridium perfringens, P26831 from SWISSPROT, is involved in pathogenesis and is likely to act on connectivity tissue during gas gangrene []. It catalyses the random hydrolysis of 1->4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate.; PDB: 2WB5_B 2V5C_B 2VUR_A 2V5D_A 2YDS_A 2CBI_A 2XPK_A 2CBJ_B 2J62_A 2X0Y_A ....
Probab=27.95 E-value=2.3e+02 Score=25.72 Aligned_cols=25 Identities=16% Similarity=0.319 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEe
Q 037515 86 TVLIQQYSQKLKTLHNYGAKKIALF 110 (263)
Q Consensus 86 ~~~v~~~~~~v~~L~~~GAr~~~V~ 110 (263)
+.-++.+.+-++.|+++|.|.|.|+
T Consensus 87 ~~d~~~L~~K~~ql~~lGvr~Fail 111 (306)
T PF07555_consen 87 EEDFEALKAKFDQLYDLGVRSFAIL 111 (306)
T ss_dssp HHHHHHHHHHHHHHHCTT--EEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 4567888899999999999999886
No 75
>PF06812 ImpA-rel_N: ImpA-related N-terminal; InterPro: IPR010657 This entry represents a conserved region located towards the N-terminal end of ImpA and related proteins. ImpA is an inner membrane protein, which has been suggested to be involved with proteins that are exported and associated with colony variations in Actinobacillus actinomycetemcomitans []. Note that many members are hypothetical proteins.
Probab=26.91 E-value=24 Score=23.79 Aligned_cols=8 Identities=38% Similarity=1.365 Sum_probs=6.6
Q ss_pred eecCCChh
Q 037515 222 FWDGVHSS 229 (263)
Q Consensus 222 fwD~~HPT 229 (263)
|||.+||.
T Consensus 53 ~W~~l~P~ 60 (62)
T PF06812_consen 53 YWDSLHPQ 60 (62)
T ss_pred CCcccCCC
Confidence 68999985
No 76
>COG3581 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.70 E-value=87 Score=29.49 Aligned_cols=46 Identities=20% Similarity=0.452 Sum_probs=31.4
Q ss_pred HHHHhCCcEEEEecCCCCCccccccccccCCCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEec
Q 037515 98 TLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINA 168 (263)
Q Consensus 98 ~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~ 168 (263)
.+.+.|+.+++- +-|.||.|..... +.++.++++++|+++++-+|.
T Consensus 327 e~i~~g~~nvIc--lqPFGCmPnhI~~-----------------------kgm~k~lk~~~p~ani~aVd~ 372 (420)
T COG3581 327 ELIESGVDNVIC--LQPFGCMPNHIVS-----------------------KGMIKGLKRDKPKANIAAVDY 372 (420)
T ss_pred HHHHcCCCceEE--ecCccCCcHHHHH-----------------------HHHHHHHHhcCCCCceEEeec
Confidence 356677777654 6799999943321 345667777888888777775
No 77
>COG1402 Uncharacterized protein, putative amidase [General function prediction only]
Probab=26.42 E-value=89 Score=27.53 Aligned_cols=26 Identities=19% Similarity=0.323 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEec
Q 037515 86 TVLIQQYSQKLKTLHNYGAKKIALFG 111 (263)
Q Consensus 86 ~~~v~~~~~~v~~L~~~GAr~~~V~n 111 (263)
+.++.-+....+.|+..|.|||+++|
T Consensus 86 ~t~~~~~~~~~~Sl~~~Gfrk~v~vN 111 (250)
T COG1402 86 ETLIALLVELVESLARHGFRKFVIVN 111 (250)
T ss_pred HHHHHHHHHHHHHHHhcCccEEEEEe
Confidence 34566667888999999999999997
No 78
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=24.45 E-value=1.2e+02 Score=23.31 Aligned_cols=27 Identities=15% Similarity=0.122 Sum_probs=23.5
Q ss_pred hhHhhHHHHHHHHHHHHHHHHHHhhCC
Q 037515 133 VDYINKAIQLFNTNLKTLVDDLNNQFR 159 (263)
Q Consensus 133 ~~~~n~~~~~fN~~L~~~l~~l~~~~p 159 (263)
.++.+.++..||..|.+.|.++++++-
T Consensus 57 e~q~~~~~~rF~~~L~~~L~~yq~~H~ 83 (112)
T TIGR02744 57 EAQQKALLGRFNALLEAELQAWQAQHH 83 (112)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 456788999999999999999998763
No 79
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed
Probab=24.34 E-value=2.4e+02 Score=23.79 Aligned_cols=23 Identities=22% Similarity=0.312 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHhCCcEEEEecC
Q 037515 90 QQYSQKLKTLHNYGAKKIALFGI 112 (263)
Q Consensus 90 ~~~~~~v~~L~~~GAr~~~V~nl 112 (263)
..+...++.|.+.|++++.+..+
T Consensus 138 ~Tl~~ai~~L~~~G~~~I~~~~l 160 (209)
T PRK00129 138 GSAIAAIDLLKKRGAKNIKVLCL 160 (209)
T ss_pred HHHHHHHHHHHHcCCCEEEEEEE
Confidence 46788899999999999988765
No 80
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated
Probab=23.17 E-value=1.3e+02 Score=29.20 Aligned_cols=54 Identities=7% Similarity=0.044 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHhCCcEEEEecCCCCCccccccccccCCCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEecc
Q 037515 90 QQYSQKLKTLHNYGAKKIALFGIGPLGCAPGPVAMYGTNGSACVDYINKAIQLFNTNLKTLVDDLNNQFRDAKFIYINAY 169 (263)
Q Consensus 90 ~~~~~~v~~L~~~GAr~~~V~nlpplgc~P~~~~~~~~~~~~c~~~~n~~~~~fN~~L~~~l~~l~~~~p~~~i~~~D~y 169 (263)
.++.+.++.|.+.|++-++| +. +..|+..+.+++.++++++|+..++-.|+-
T Consensus 226 ~~~~~~a~~Lv~aGvd~i~~-D~---------------------------a~~~~~~~~~~i~~ik~~~p~~~v~agnv~ 277 (479)
T PRK07807 226 GDVAAKARALLEAGVDVLVV-DT---------------------------AHGHQEKMLEALRAVRALDPGVPIVAGNVV 277 (479)
T ss_pred hhHHHHHHHHHHhCCCEEEE-ec---------------------------cCCccHHHHHHHHHHHHHCCCCeEEeeccC
Confidence 45677888888999887544 21 113366777889999999999988887875
Q ss_pred hh
Q 037515 170 DL 171 (263)
Q Consensus 170 ~~ 171 (263)
+.
T Consensus 278 t~ 279 (479)
T PRK07807 278 TA 279 (479)
T ss_pred CH
Confidence 54
No 81
>cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF).
Probab=22.91 E-value=2.8e+02 Score=24.66 Aligned_cols=45 Identities=13% Similarity=0.200 Sum_probs=35.3
Q ss_pred cCceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHhCCcEEEEecCCC
Q 037515 50 SKCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNYGAKKIALFGIGP 114 (263)
Q Consensus 50 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~GAr~~~V~nlpp 114 (263)
++..++|-+|+|=+.. ++..+++...|..|+++|.|-++|.+-.|
T Consensus 34 ~~~f~VIK~GG~~~~~--------------------~~~~~~l~~dla~L~~lGl~~VlVHGggp 78 (271)
T cd04236 34 WPAFAVLEVDHSVFRS--------------------LEMVQSLSFGLAFLQRMDMKLLVVMGLSA 78 (271)
T ss_pred CCCEEEEEEChhhhcC--------------------chhHHHHHHHHHHHHHCCCeEEEEeCCCh
Confidence 4578888888875421 13567788899999999999999999865
No 82
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=22.38 E-value=98 Score=23.12 Aligned_cols=18 Identities=33% Similarity=0.521 Sum_probs=14.6
Q ss_pred HHHHHHHHHhCCcEEEEe
Q 037515 93 SQKLKTLHNYGAKKIALF 110 (263)
Q Consensus 93 ~~~v~~L~~~GAr~~~V~ 110 (263)
.+.+++|.+.|+|+|+|.
T Consensus 45 ~~~l~~l~~~G~~~i~lv 62 (103)
T cd03413 45 DDVLAKLKKAGIKKVTLM 62 (103)
T ss_pred HHHHHHHHHcCCCEEEEE
Confidence 556678889999999884
No 83
>PF06858 NOG1: Nucleolar GTP-binding protein 1 (NOG1); InterPro: IPR010674 This domain represents a conserved region of approximately 60 residues in length within nucleolar GTP-binding protein 1 (NOG1). The NOG1 family includes eukaryotic, bacterial and archaeal proteins. In Saccharomyces cerevisiae, the NOG1 gene has been shown to be essential for cell viability, suggesting that NOG1 may play an important role in nucleolar functions. In particular, NOG1 is believed to be functionally linked to ribosome biogenesis, which occurs in the nucleolus. In eukaryotes, NOG1 mutants were found to disrupt the biogenesis of the 60S ribosomal subunit []. The DRG and OBG proteins as well as the prokaryotic NOG-like proteins are homologous throughout their length to the amino half of eukaryotic NOG1, which contains the GTP binding motifs (IPR006073 from INTERPRO); the N-terminal GTP-binding motif is required for function.; GO: 0005525 GTP binding; PDB: 2E87_A.
Probab=21.67 E-value=1.4e+02 Score=20.10 Aligned_cols=26 Identities=19% Similarity=0.017 Sum_probs=16.8
Q ss_pred ceecccccCCcccccHHHHHHHHHHHHHH
Q 037515 6 WATIESKIRLGVVISLNGQLQNHKTTVSR 34 (263)
Q Consensus 6 ~~~~~t~~~~~~~~~l~~Qv~~F~~~~~~ 34 (263)
|++|-|+.- -+++.+|++.|++.+..
T Consensus 19 fi~D~Se~C---Gysie~Q~~L~~~ik~~ 44 (58)
T PF06858_consen 19 FIIDPSEQC---GYSIEEQLSLFKEIKPL 44 (58)
T ss_dssp EEE-TT-TT---SS-HHHHHHHHHHHHHH
T ss_pred EEEcCCCCC---CCCHHHHHHHHHHHHHH
Confidence 566777641 36999999999887654
No 84
>CHL00202 argB acetylglutamate kinase; Provisional
Probab=21.60 E-value=3.8e+02 Score=23.72 Aligned_cols=62 Identities=18% Similarity=0.274 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHHhCChhHHHhhccCceEEEEeccchhhhhhcCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHh
Q 037515 23 GQLQNHKTTVSRIASILGDQESATQHLSKCLYTVGFGSNDYINNYLLPQFYPTSRQYPPDQYATVLIQQYSQKLKTLHNY 102 (263)
Q Consensus 23 ~Qv~~F~~~~~~~~~~~g~~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~ 102 (263)
+++++|.+..+.+.. +.+..++|-+|++=... +.+...+.+.|..|...
T Consensus 6 ~~~~~~~~~~pyi~~-----------~~~~~~VIk~gG~~~~~--------------------~~l~~~~~~di~~l~~~ 54 (284)
T CHL00202 6 ERVQVLSEALPYIQK-----------FRGRIMVIKYGGAAMKN--------------------LILKADIIKDILFLSCI 54 (284)
T ss_pred HHHHHHHHHHHHHHH-----------HcCCeEEEEEChHHhcC--------------------cchHHHHHHHHHHHHHC
Confidence 567777765544322 34568999999865321 12345567788889999
Q ss_pred CCcEEEEecCCCC
Q 037515 103 GAKKIALFGIGPL 115 (263)
Q Consensus 103 GAr~~~V~nlppl 115 (263)
|.+=++|.+-.+.
T Consensus 55 g~~~VlVHGgg~~ 67 (284)
T CHL00202 55 GLKIVVVHGGGPE 67 (284)
T ss_pred CCcEEEEeCCcHH
Confidence 9999999988774
No 85
>cd03312 CIMS_N_terminal_like CIMS - Cobalamine-independent methonine synthase, or MetE, N-terminal domain_like. Many members have been characterized as 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferases, EC:2.1.1.14, mostly from bacteria and plants. This enzyme catalyses the last step in the production of methionine by transferring a methyl group from 5-methyltetrahydrofolate to L-homocysteine without using an intermediate methyl carrier. The active enzyme has a dual (beta-alpha)8-barrel structure, and this model covers the N-terminal barrel, and a few single-barrel sequences most similar to the N-terminal barrel. It is assumed that the homologous N-terminal barrel has evolved from the C-terminus via gene duplication and has subsequently lost binding sites, and it seems as if the two barrels forming the active enzyme may sometimes reside on different polypeptides. The C-terminal domain incorporates the Zinc ion, which binds and activates homocysteine. Side chains fro
Probab=21.03 E-value=1.5e+02 Score=27.46 Aligned_cols=30 Identities=23% Similarity=0.276 Sum_probs=25.9
Q ss_pred ChhhhHHHHHHHHHHHHHHHHHhCCcEEEE
Q 037515 80 PPDQYATVLIQQYSQKLKTLHNYGAKKIAL 109 (263)
Q Consensus 80 ~~~~~~~~~v~~~~~~v~~L~~~GAr~~~V 109 (263)
+..+++.+++..+.+.++.|+++|++-|-+
T Consensus 172 ~~~el~~dla~~y~~el~~L~~aG~~~IQi 201 (360)
T cd03312 172 DRLSLLDKLLPVYKELLKKLAAAGAEWVQI 201 (360)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEe
Confidence 456889999999999999999999986544
No 86
>cd03415 CbiX_CbiC Archaeal sirohydrochlorin cobalt chelatase (CbiX) single domain. Proteins in this subgroup contain a single CbiX domain N-terminal to a precorrin-8X methylmutase (CbiC) domain. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, while CbiC catalyzes the conversion of cobalt-precorrin 8 to cobyrinic acid by methyl rearrangement. Both CbiX and CbiC are involved in vitamin B12 biosynthesis.
Probab=20.43 E-value=1.1e+02 Score=23.86 Aligned_cols=19 Identities=21% Similarity=0.270 Sum_probs=16.5
Q ss_pred HHHHHHHHHHhCCcEEEEe
Q 037515 92 YSQKLKTLHNYGAKKIALF 110 (263)
Q Consensus 92 ~~~~v~~L~~~GAr~~~V~ 110 (263)
+.+.+++|.+.|+++++|+
T Consensus 46 l~~~l~~l~~~G~~~ivVv 64 (125)
T cd03415 46 WRDLLNELLSEGYGHIIIA 64 (125)
T ss_pred HHHHHHHHHHCCCCEEEEe
Confidence 5777889999999999996
No 87
>PF01717 Meth_synt_2: Cobalamin-independent synthase, Catalytic domain; InterPro: IPR002629 This is a domain of vitamin-B12 independent methionine synthases or 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferases, 2.1.1.14 from EC from bacteria and plants. Plants are the only higher eukaryotes that have the required enzymes for methionine synthesis []. This enzyme catalyses the last step in the production of methionine by transferring a methyl group from 5-methyltetrahydrofolate to homocysteine []. The aligned region makes up the carboxy region of the approximately 750 amino acid protein except in some hypothetical archaeal proteins present in the family, where this region corresponds to the entire length.; GO: 0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, 0009086 methionine biosynthetic process; PDB: 1U22_A 1U1H_A 1U1U_A 1U1J_A 3BQ5_A 3BQ6_A 1XDJ_B 1XR2_B 1T7L_B 1XPG_B ....
Probab=20.40 E-value=1.6e+02 Score=26.47 Aligned_cols=34 Identities=12% Similarity=0.252 Sum_probs=27.0
Q ss_pred ChhhhHHHHHHHHHHHHHHHHHhCCcEEEEecCCC
Q 037515 80 PPDQYATVLIQQYSQKLKTLHNYGAKKIALFGIGP 114 (263)
Q Consensus 80 ~~~~~~~~~v~~~~~~v~~L~~~GAr~~~V~nlpp 114 (263)
+..+++..++..+.+.|+.|+++|+| ++=++=|-
T Consensus 144 ~~~~~~~dla~a~~~ei~~l~~~G~~-~iQiDeP~ 177 (324)
T PF01717_consen 144 DREELLEDLAEAYREEIRALYDAGCR-YIQIDEPA 177 (324)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHTT-S-EEEEEETC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCC-EEEecchH
Confidence 56689999999999999999999996 45666663
No 88
>KOG0907 consensus Thioredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=20.09 E-value=1.3e+02 Score=22.59 Aligned_cols=24 Identities=13% Similarity=0.419 Sum_probs=20.4
Q ss_pred HHHHHHHHHhhCCCcEEEEEecch
Q 037515 147 LKTLVDDLNNQFRDAKFIYINAYD 170 (263)
Q Consensus 147 L~~~l~~l~~~~p~~~i~~~D~y~ 170 (263)
+.-.+.+|..+||++.|+.+|+..
T Consensus 39 i~P~~~~La~~y~~v~Flkvdvde 62 (106)
T KOG0907|consen 39 IAPKFEKLAEKYPDVVFLKVDVDE 62 (106)
T ss_pred hhhHHHHHHHHCCCCEEEEEeccc
Confidence 345778889999999999999987
Done!