BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 037516
         (330 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255563110|ref|XP_002522559.1| cysteine protease, putative [Ricinus communis]
 gi|223538250|gb|EEF39859.1| cysteine protease, putative [Ricinus communis]
          Length = 344

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 185/337 (54%), Positives = 235/337 (69%), Gaps = 11/337 (3%)

Query: 1   MLIIMVT-WASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           M +++VT WAS   SR+LHE S+  +H+ WM Q  R YK   EK  RFKIFK+N  FIE 
Sbjct: 12  MAMLLVTLWASQSWSRSLHEASMELRHKTWMTQYGRVYKGNVEKEKRFKIFKENVEFIES 71

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLP 119
           FN  GN+ YKL +N F DLT+EEF ASH GY M   ++S+   SY    F Y ++   +P
Sbjct: 72  FNNNGNKPYKLGINAFTDLTNEEFRASHNGYTM---SMSSHQSSYRTKSFRY-ENVTAVP 127

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--- 176
            S+DWR +GAVT +K+QG CGCCW FSAVAA+EGITK+ TG LISLSEQ+++DC  S   
Sbjct: 128 PSLDWRTKGAVTHIKDQGQCGCCWAFSAVAAMEGITKLSTGTLISLSEQELVDCDTSGMD 187

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SEL 235
           +GC GG MDDAF +II + GLT E  YPY+  +G CN ++ A  AA+I  Y++VP   E 
Sbjct: 188 QGCEGGLMDDAFEFIIENNGLTTEANYPYEGVDGSCNTRKAANHAAKITGYENVPAYDEE 247

Query: 236 ALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIK 294
           ALR AV+ QPVSVAIDA    F++YS G+F G CG  L+H VT+VGYG+S++G  YWL+K
Sbjct: 248 ALRKAVANQPVSVAIDAGESAFQHYSSGIFTGDCGTELDHGVTVVGYGTSDDGTKYWLVK 307

Query: 295 NSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           NSWG +WGE G+IRM RD+    GLCGIA + SYP A
Sbjct: 308 NSWGTSWGEDGYIRMERDIDAKEGLCGIAMEPSYPTA 344


>gi|255564910|ref|XP_002523448.1| cysteine protease, putative [Ricinus communis]
 gi|223537276|gb|EEF38907.1| cysteine protease, putative [Ricinus communis]
          Length = 341

 Score =  368 bits (944), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 181/334 (54%), Positives = 235/334 (70%), Gaps = 11/334 (3%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L+++  W S   SR+LH+ +++ +HE+WM +  R YK+ +EK  RF+IF+ N  FIE FN
Sbjct: 14  LLVVGLWVSQAWSRSLHDAAMNERHEMWMVKYGRVYKDNSEKERRFEIFRNNVEFIESFN 73

Query: 62  REGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRS 121
           + GN+ YKL +NEFADLT+EEF AS  GYK  + N+    +S     F Y +    +P S
Sbjct: 74  KPGNRPYKLDINEFADLTNEEFKASRNGYKRSS-NVGLSEKSS----FRYGNVT-AVPTS 127

Query: 122 IDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---RG 178
           +DWR +GAVTP+K+QG CGCCW FSAVAA+EGITK+ TG+LISLSEQ+++DC  S   +G
Sbjct: 128 MDWRQKGAVTPIKDQGQCGCCWAFSAVAAMEGITKLSTGKLISLSEQELVDCDTSGEDQG 187

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELAL 237
           C GG MDDAF +I ++ GLT E  YPYQ  +G CN  +    AA+I  Y+DVP  SE AL
Sbjct: 188 CEGGLMDDAFEFIKQNGGLTTEANYPYQGTDGTCNTNKAGNDAAKITGYEDVPANSEDAL 247

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSW 297
             AV+ QPVSVAIDAS   F++YSGGVF G CG  L+H VT VGYG+S+   YWL+KNSW
Sbjct: 248 LKAVASQPVSVAIDASGSAFQFYSGGVFTGDCGTELDHGVTAVGYGTSDGTKYWLVKNSW 307

Query: 298 GQNWGEGGFIRMRRDV-GGAGLCGIARKASYPIA 330
           G +WGE G+IRM RD+    GLCGIA ++SYP A
Sbjct: 308 GTSWGEDGYIRMERDIEAKEGLCGIAMQSSYPTA 341


>gi|255564908|ref|XP_002523447.1| cysteine protease, putative [Ricinus communis]
 gi|223537275|gb|EEF38906.1| cysteine protease, putative [Ricinus communis]
          Length = 342

 Score =  367 bits (943), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 183/337 (54%), Positives = 234/337 (69%), Gaps = 16/337 (4%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L+++  WAS   SR+LH+ +++ +HE+WMA+  R YK+ +EK  RF+IF+ N  FIE FN
Sbjct: 14  LLVVGLWASQAWSRSLHDAAMNERHEMWMAKYGRVYKDNSEKERRFEIFRNNVEFIESFN 73

Query: 62  REGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQS--YANNWFGYPDSRRGLP 119
           + GN+ YKL +NEFADLT+EEF  S  GYK  +     +  S  YAN           +P
Sbjct: 74  KLGNRPYKLDINEFADLTNEEFKVSKNGYKRSSGVGLTEKSSFRYAN--------VTAVP 125

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--- 176
            S+DWR  GAVTP+K+QG CGCCW FSAVAA+EGITK+ TG+LISLSEQ+++DC  S   
Sbjct: 126 TSMDWRQNGAVTPIKDQGQCGCCWAFSAVAAMEGITKLSTGKLISLSEQELVDCDTSGED 185

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSEL 235
           +GC GG MDDAF +I ++ GLT E  YPYQ  +G CN  +    AA+I  Y+DVP  SE 
Sbjct: 186 QGCEGGLMDDAFEFIKQNGGLTTEANYPYQGTDGTCNTNKAGNDAAKITGYEDVPANSED 245

Query: 236 ALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIK 294
           AL  AV+ QPVSVAIDAS   F++YSGGVF G CG  L+H VT VGYG+S++G  YWL+K
Sbjct: 246 ALLKAVASQPVSVAIDASGSAFQFYSGGVFTGDCGTELDHGVTAVGYGTSDDGTKYWLVK 305

Query: 295 NSWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPIA 330
           NSWG +WGE G+IRM RD+    GLCGIA + SYP A
Sbjct: 306 NSWGTSWGEDGYIRMERDIEAKEGLCGIAMQPSYPTA 342


>gi|225443827|ref|XP_002274223.1| PREDICTED: vignain-like [Vitis vinifera]
          Length = 340

 Score =  360 bits (923), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 186/335 (55%), Positives = 237/335 (70%), Gaps = 12/335 (3%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L+IM  WAS  +SRTLHE S+S +HE WM    RTYK+ AEK  RFKIFK+N  +IE  N
Sbjct: 12  LLIMGVWASQALSRTLHEVSMSERHEDWMGLYGRTYKDIAEKERRFKIFKENVEYIESVN 71

Query: 62  REGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRS 121
             GN+ YKLS+NEFAD T+EEF AS  GY M +R  S++  S     F Y ++   +P S
Sbjct: 72  SAGNRRYKLSINEFADQTNEEFKASRNGYNMSSRPRSSEITS-----FRY-ENVAAVPSS 125

Query: 122 IDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---RG 178
           +DWR +GAVTP+K+QG CGCCW FSAVAA+EG+T+++TG LISLSEQ+++DC  S   +G
Sbjct: 126 MDWRKKGAVTPIKDQGQCGCCWAFSAVAAMEGVTQLKTGELISLSEQELVDCDTSGEDQG 185

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELAL 237
           C GG MD AF +II + GLT E  YPY+  +  CN ++ A  AA+I++Y+DVP  SE AL
Sbjct: 186 CGGGLMDSAFEFIIGNGGLTTEANYPYKGVDATCNKKKAASSAAKIKNYEDVPANSEAAL 245

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNS 296
             AV++ PVSVAIDA    F++YS GVF G CG  L+H VT VGYG +++G  YWL+KNS
Sbjct: 246 LKAVAQHPVSVAIDAGGSDFQFYSSGVFTGQCGTELDHGVTAVGYGKTDDGTKYWLVKNS 305

Query: 297 WGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           WG  WGE G+I M RD+G   GLCGIA +ASYP A
Sbjct: 306 WGTGWGEDGYIWMERDIGADEGLCGIAMEASYPTA 340


>gi|50355621|dbj|BAD29959.1| cysteine protease [Daucus carota]
          Length = 361

 Score =  358 bits (920), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 174/335 (51%), Positives = 236/335 (70%), Gaps = 12/335 (3%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           LI++  WA    SRTL E S+  +HE WM Q  R YK++AEK++RF+IF  N +FIE+FN
Sbjct: 33  LILLGAWACQATSRTLPEASMFERHEQWMIQYGRVYKDEAEKSVRFQIFMDNVKFIEEFN 92

Query: 62  REGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRS 121
           ++G Q+YKL++NEFAD T+EEF AS  GYKM   +  +Q+       F Y ++   +P S
Sbjct: 93  KDGRQSYKLAVNEFADQTNEEFQASRNGYKMAVSSRPSQT-----TLFRY-ENVTAVPSS 146

Query: 122 IDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---RG 178
           +DWR +GAVTPVK+QG CG CW FS +AA EGITK++TG+LISLSEQ+++DC  +   +G
Sbjct: 147 MDWRKKGAVTPVKDQGQCGSCWAFSTIAATEGITKLKTGKLISLSEQELVDCDKTGEDQG 206

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELAL 237
           C GG+M+D F +I++++G+  E  YPY   +G CN +  A +AA+I  Y+ VP  SE AL
Sbjct: 207 CEGGYMEDGFEFIVKNKGIALEASYPYTAADGTCNSKEEASRAAKISGYEKVPANSETAL 266

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNS 296
             AV+ QPVSV+IDAS   F++YS GVF G CG +L+H VT VGYG +++G  YWL+KNS
Sbjct: 267 LKAVANQPVSVSIDASGVAFQFYSSGVFTGECGTDLDHGVTAVGYGKTSDGTKYWLVKNS 326

Query: 297 WGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           WG +WG+ G+I M+R V    GLCGIA  ASYP A
Sbjct: 327 WGASWGDSGYIMMQRGVAAKGGLCGIAMDASYPTA 361


>gi|124484401|dbj|BAF46311.1| cysteine proteinase precursor [Ipomoea nil]
          Length = 339

 Score =  354 bits (909), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 177/336 (52%), Positives = 228/336 (67%), Gaps = 14/336 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           + ++  T A L  SRTL +  ++ +HE WMAQ  R YKN+ EK  R+ IFK+N  +IE F
Sbjct: 12  LALVFATSAYLATSRTLLDSLMAVRHEQWMAQYGRVYKNEVEKTKRYNIFKENVEYIESF 71

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+ G + YKL +N FADLT++EFIAS  GY +P    SN    Y N           +P 
Sbjct: 72  NKAGTKPYKLGINAFADLTNKEFIASRNGYILPHECSSNTPFRYEN--------VSAVPT 123

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SR 177
           ++DWR +GAVTPVK+QG CGCCW FSAVAA+EGITK+ TG LISLSEQ+++DC      +
Sbjct: 124 TVDWRKKGAVTPVKDQGQCGCCWAFSAVAAMEGITKLSTGNLISLSEQELVDCDVKGIDQ 183

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELA 236
           GC GG MDDAF++II ++GLT E  YPYQ  +G C   + +  AA+I  Y+DVP  SE A
Sbjct: 184 GCEGGLMDDAFTFIINNKGLTTESNYPYQGTDGSCKKSKSSNSAAKISGYEDVPANSESA 243

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKN 295
           L  AV+ QPVSVAIDA    F++YS GVF G CG  L+H VT VGYG + +G  YWL+KN
Sbjct: 244 LEKAVANQPVSVAIDAGGSDFQFYSSGVFTGECGTELDHGVTAVGYGIAEDGSKYWLVKN 303

Query: 296 SWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPIA 330
           SWG +WGE G+IRM++D+    GLCGIA ++SYP A
Sbjct: 304 SWGTSWGEKGYIRMQKDIEAKEGLCGIAMQSSYPSA 339


>gi|225446583|ref|XP_002280204.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1 [Vitis vinifera]
          Length = 341

 Score =  354 bits (908), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 174/336 (51%), Positives = 229/336 (68%), Gaps = 14/336 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L ++  WAS   +R LHE S+  +HE WM Q  R YK+  EK+ R+KIFK N   IE F
Sbjct: 14  LLFVLAAWASQATARNLHEASMYERHEDWMVQYGREYKDADEKSKRYKIFKDNVARIESF 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+  +++YKLS+NEFADLT+EEF AS   +K    +    S  Y N           +P 
Sbjct: 74  NKAMDKSYKLSINEFADLTNEEFRASRNRFKAHICSTEATSFKYEN--------VTAVPS 125

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---R 177
           ++DWR +GAVTP+K+QG CG CW FSAVAA+EGIT++ TG+LISLSEQ+++DC  S   +
Sbjct: 126 TVDWRKKGAVTPIKDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSGEDQ 185

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELA 236
           GC GG MDDAF +I ++ GLT E  YPY   +G CN ++ A  AA+I  Y+DVP  +E A
Sbjct: 186 GCSGGLMDDAFKFIEQNHGLTTEANYPYAGTDGTCNRKKAAHPAAKINGYEDVPANNEKA 245

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKN 295
           L+ AV+ QP++VAIDA    F++YS GVF G CG  L+H V+ VGYG+S++G  YWL+KN
Sbjct: 246 LQKAVAHQPIAVAIDAGGSEFQFYSSGVFTGQCGTELDHGVSAVGYGTSDDGMKYWLVKN 305

Query: 296 SWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           SWG  WGE G+IRM+RDV    GLCGIA +ASYP A
Sbjct: 306 SWGTGWGEEGYIRMQRDVTAKEGLCGIAMQASYPTA 341


>gi|13491750|gb|AAK27968.1|AF242372_1 cysteine protease [Ipomoea batatas]
          Length = 339

 Score =  354 bits (908), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 179/332 (53%), Positives = 224/332 (67%), Gaps = 14/332 (4%)

Query: 5   MVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREG 64
             T A L  SRTL +  +  +HE WMAQ  R YK +AEK  RF IFK+N  +IE FN+ G
Sbjct: 16  FATSAYLATSRTLSDSLMVVRHEQWMAQYGRVYKTEAEKTKRFNIFKENVEYIESFNKAG 75

Query: 65  NQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDW 124
            + YKL +N FADLT++EF AS  GYK+P    SN    Y N           +P ++DW
Sbjct: 76  TKPYKLGINAFADLTNQEFKASRNGYKLPHDCSSNTPFRYEN--------VSSVPTTVDW 127

Query: 125 RARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYG 181
           R +GAVTPVK+QG CGCCW FSAVAA+EGITK+ TG LISLSEQ+++DC      +GC G
Sbjct: 128 RTKGAVTPVKDQGQCGCCWAFSAVAAMEGITKLSTGNLISLSEQELVDCDVKGTDQGCEG 187

Query: 182 GWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYA 240
           G MDDAFS+II ++GLT E  YPYQ  +G C   + +  AA+I  Y+DVP  SE AL  A
Sbjct: 188 GLMDDAFSFIINNKGLTTESNYPYQGTDGSCKKSKSSNSAAKISGYEDVPANSESALEKA 247

Query: 241 VSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQ 299
           V+ QPVSVAIDA    F++YS GVF G CG  L+H VT VGYG + +G  YWL+KNSWG 
Sbjct: 248 VANQPVSVAIDAGGSDFQFYSSGVFTGECGTELDHGVTAVGYGIAEDGSKYWLVKNSWGT 307

Query: 300 NWGEGGFIRMRRDV-GGAGLCGIARKASYPIA 330
           +WGE G+IRM++D+    GLCGIA ++SYP A
Sbjct: 308 SWGEKGYIRMQKDIEAKEGLCGIAMQSSYPSA 339


>gi|147788834|emb|CAN64655.1| hypothetical protein VITISV_005140 [Vitis vinifera]
          Length = 341

 Score =  353 bits (907), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 175/336 (52%), Positives = 230/336 (68%), Gaps = 14/336 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L ++  WAS   +R LHE S+  +HE WMAQ  R YK+  EK+ R+KIFK N   IE F
Sbjct: 14  LLFVLAAWASHAKARNLHEASMYERHEDWMAQYGRVYKDAGEKSKRYKIFKDNVARIESF 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+  N++YKLS+NEFADLT+EEF AS   +K    +    S  Y        +    +P 
Sbjct: 74  NKAMNKSYKLSINEFADLTNEEFRASRNRFKAHICSTEATSFKY--------EHVXAVPS 125

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---R 177
           ++DWR +GAVTP+K+QG CG CW FSAVAA+EGIT++ TG+LISLSEQ+++DC  S   +
Sbjct: 126 TVDWRKKGAVTPIKDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSGEDQ 185

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELA 236
           GC GG MDDAF +I ++ GLT E  YPY   +G CN ++ A  AA+I  Y+DVP  +E A
Sbjct: 186 GCSGGLMDDAFKFIEQNHGLTTEANYPYAGTDGTCNRKKAAHPAAKINGYEDVPANNEKA 245

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKN 295
           L+ AV+ QP++VAIDA    F++YS GVF G CG  L+H V+ VGYG+S++G  YWL+KN
Sbjct: 246 LQKAVAHQPIAVAIDAGGFEFQFYSSGVFTGQCGTELDHGVSAVGYGTSDDGMKYWLVKN 305

Query: 296 SWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPIA 330
           SWG  WGE G+IRM+RDV    GLCGIA +ASYP A
Sbjct: 306 SWGTGWGEEGYIRMQRDVTEKEGLCGIAMQASYPTA 341


>gi|225446581|ref|XP_002280246.1| PREDICTED: vignain [Vitis vinifera]
          Length = 341

 Score =  353 bits (907), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 174/336 (51%), Positives = 229/336 (68%), Gaps = 14/336 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L ++  WAS   +R+LHE S+  +HE WM Q  R YK+  EK+ R+KIFK N   IE F
Sbjct: 14  LLFVLAAWASQATARSLHEASMYERHEDWMVQYGREYKDADEKSKRYKIFKDNVARIESF 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+  +++YKLS+NEFADLT+EEF AS   +K    +    S  Y N           +P 
Sbjct: 74  NKAMDKSYKLSINEFADLTNEEFRASRNRFKAHICSTEATSFKYEN--------VTAVPS 125

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---R 177
           ++DWR +GAVTP+K+QG CG CW FSAVAA+EGIT++ TG+LISLSEQ+++DC  S   +
Sbjct: 126 TVDWRKKGAVTPIKDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSGEDQ 185

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GG MDDAF +I ++ GLT E  YPY   +G CN ++ A  AA+I  Y+DVP  +E A
Sbjct: 186 GCSGGLMDDAFKFIEQNHGLTTEANYPYAGTDGTCNRKKAAHPAAKINGYEDVPANNEKA 245

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKN 295
           L+ AV+ QP++VAIDAS   F++YS GVF G CG  L+H V  VGYG+S++G  YWL+KN
Sbjct: 246 LQKAVAHQPIAVAIDASGSEFQFYSSGVFTGQCGTELDHGVAAVGYGTSDDGMKYWLVKN 305

Query: 296 SWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPIA 330
           SW   WGE G+IRM+RDV    GLCGIA +ASYP A
Sbjct: 306 SWSTGWGEEGYIRMQRDVTAKEGLCGIAMQASYPTA 341


>gi|147839728|emb|CAN70559.1| hypothetical protein VITISV_032465 [Vitis vinifera]
          Length = 341

 Score =  352 bits (903), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 174/336 (51%), Positives = 228/336 (67%), Gaps = 14/336 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L ++  WAS   +R LHE S+  +HE WM Q  R YK+  EK+ R+KIFK N   IE F
Sbjct: 14  LLFVLAAWASQATARXLHEASMYERHEDWMVQYGREYKDADEKSKRYKIFKDNVARIESF 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+  +++YKLS+NEFADLT+EEF AS   +K    +    S  Y N           +P 
Sbjct: 74  NKAMDKSYKLSINEFADLTNEEFRASRNRFKAHICSTEATSFKYEN--------VTAVPS 125

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---R 177
           ++DWR +GAVTP+K+QG CG CW FSAVAA+EGIT++ TG+LISLSEQ+++DC  S   +
Sbjct: 126 TVDWRKKGAVTPIKDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSGEDQ 185

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GG MDDAF +I ++ GLT E  YPY   +G CN ++ A  AA+I  Y+DVP  +E A
Sbjct: 186 GCSGGLMDDAFKFIEQNHGLTTEANYPYAGTDGTCNRKKAAHPAAKINGYEDVPANNEKA 245

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKN 295
           L+ AV+ QP++VAIDAS   F++YS GVF G CG  L+H V  VGYG+S++G  YWL+KN
Sbjct: 246 LQKAVAHQPIAVAIDASGSEFQFYSSGVFTGQCGTELDHGVAAVGYGTSDDGMKYWLVKN 305

Query: 296 SWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPIA 330
           SW   WGE G+IRM+RDV    GLCGIA +ASYP A
Sbjct: 306 SWSTGWGEEGYIRMQRDVTVKEGLCGIAMQASYPTA 341


>gi|24285904|gb|AAL14199.1| cysteine proteinase precursor [Ipomoea batatas]
 gi|56961686|gb|AAK15148.2| cysteine proteinase-like protein [Ipomoea batatas]
          Length = 341

 Score =  352 bits (902), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 178/332 (53%), Positives = 224/332 (67%), Gaps = 14/332 (4%)

Query: 5   MVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREG 64
             T A L  SRTL +  +  +HE WMAQ  R Y+N+ EK  RF IFK+N  +IE FN+ G
Sbjct: 18  FATSAYLATSRTLSDSLMVVRHEQWMAQYGRVYENEVEKTKRFNIFKENVEYIESFNKAG 77

Query: 65  NQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDW 124
            + YKL +N FADLT++EF AS  GYK+P    SN    Y N           +P ++DW
Sbjct: 78  TKPYKLGINAFADLTNQEFKASRNGYKLPHDCSSNTPFRYEN--------VSSVPTTVDW 129

Query: 125 RARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYG 181
           R +GAVTPVK+QG CGCCW FSAVAA+EGITK+ TG LISLSEQ+++DC      +GC G
Sbjct: 130 RTKGAVTPVKDQGQCGCCWAFSAVAAMEGITKLSTGNLISLSEQELVDCDVKGIDQGCEG 189

Query: 182 GWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYA 240
           G MDDAFS+II ++GLT E  YPYQ  +G C   + +  AA+I  Y+DVP  SE AL  A
Sbjct: 190 GLMDDAFSFIINNKGLTTESNYPYQGTDGSCKKSKSSNSAAKISGYEDVPANSESALEKA 249

Query: 241 VSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQ 299
           V+ QPVSVAIDA    F++YS GVF G CG  L+H VT VGYG + +G  YWL+KNSWG 
Sbjct: 250 VANQPVSVAIDAGGSDFQFYSSGVFTGECGTELDHGVTAVGYGIAEDGSKYWLVKNSWGT 309

Query: 300 NWGEGGFIRMRRDV-GGAGLCGIARKASYPIA 330
           +WGE G+IRM++D+    GLCGIA ++SYP A
Sbjct: 310 SWGEKGYIRMQKDIEAKEGLCGIAMQSSYPSA 341


>gi|359485281|ref|XP_002280230.2| PREDICTED: LOW QUALITY PROTEIN: KDEL-tailed cysteine endopeptidase
           CEP1 [Vitis vinifera]
          Length = 341

 Score =  352 bits (902), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 175/336 (52%), Positives = 227/336 (67%), Gaps = 14/336 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L ++  WAS   +R LHE S+  +HE WMAQ  R YK+  EK+ R+KIFK N   IE F
Sbjct: 14  LLFVLAAWASQATARNLHEASMYERHEDWMAQYGRVYKDADEKSKRYKIFKDNVARIESF 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+  +++YKLS+NEFADLT+EEF  S   +K    +    S  Y N           +P 
Sbjct: 74  NKAMDKSYKLSINEFADLTNEEFGTSRNRFKAHICSTEATSFKYEN--------VTAVPS 125

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---R 177
           +IDWR +GAVTP+K+QG CG CW FSAVAA+EGIT++ TG+LISLSEQ+++DC  S   +
Sbjct: 126 TIDWRKKGAVTPIKDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSGEDQ 185

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELA 236
           GC GG MDDAF +I ++ GLT E  YPY   +G CN ++ A  AA+I  Y+DVP  +E A
Sbjct: 186 GCNGGLMDDAFKFIKQNHGLTTEANYPYAGTDGTCNRKKAAHPAAKINGYEDVPANNEKA 245

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKN 295
           L+ AV  QP++VAIDA    F++YS GVF G CG  L+H V  VGYG+S++G  YWL+KN
Sbjct: 246 LQKAVVHQPIAVAIDAGGFEFQFYSSGVFTGQCGTELDHGVAAVGYGTSDDGMKYWLVKN 305

Query: 296 SWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPIA 330
           SWG  WGE G+IRM+RDV    GLCGIA +ASYP A
Sbjct: 306 SWGTGWGEEGYIRMQRDVTAKEGLCGIAMQASYPTA 341


>gi|118627554|emb|CAL64936.1| putative cysteine protease 8 [Trifolium pratense]
          Length = 344

 Score =  350 bits (898), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 174/339 (51%), Positives = 230/339 (67%), Gaps = 17/339 (5%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L  +  +A  V SRTL +DS+  +H  WM+Q  + YK+  E+  RFKIFK+N  +IE F
Sbjct: 14  LLFCLGLFAIQVTSRTLQDDSMYERHGQWMSQYGKIYKDHQERETRFKIFKENVNYIETF 73

Query: 61  NR-EGNQTYKLSLNEFADLTDEEFIASHTGYK--MPTRNISNQSQSYANNWFGYPDSRRG 117
           N  +  ++YKL +N+FADLT+EEFIAS   +K  M +  +   S  Y N          G
Sbjct: 74  NNADDTKSYKLGINQFADLTNEEFIASRNKFKGHMCSSIMRTTSFKYEN--------VSG 125

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-- 175
           +P ++DWR +GAVTPVKNQG CGCCW FSAVAA EGI K+ TG+LISLSEQ+++DC    
Sbjct: 126 IPSTVDWRKKGAVTPVKNQGQCGCCWAFSAVAATEGIHKLSTGKLISLSEQELVDCDTKG 185

Query: 176 -SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TS 233
             +GC GG MDDAF +II++ GL+ E  YPY+  +G CN  + +++A  I  Y+DVP  S
Sbjct: 186 VDQGCEGGLMDDAFKFIIQNHGLSTEAQYPYEGVDGTCNANKASVQAVTITGYEDVPANS 245

Query: 234 ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWL 292
           E AL+ AV+ QP+SVAIDAS   F++Y  GVF G CG  L+H VT VGYG SN+G  YWL
Sbjct: 246 EQALQKAVANQPISVAIDASGSDFQFYKSGVFTGACGTELDHGVTAVGYGVSNDGTKYWL 305

Query: 293 IKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
           +KNSWG +WGE G+I M+R +  A G+CGIA +ASYP A
Sbjct: 306 VKNSWGTDWGEEGYIMMQRGIEAAEGICGIAMQASYPTA 344


>gi|357483847|ref|XP_003612210.1| Cysteine proteinase [Medicago truncatula]
 gi|355513545|gb|AES95168.1| Cysteine proteinase [Medicago truncatula]
          Length = 344

 Score =  348 bits (894), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 172/339 (50%), Positives = 227/339 (66%), Gaps = 17/339 (5%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           ++  +  WA  V SRTL + S+  +HE WM    + YK+  E+  RFKIF +N ++IE F
Sbjct: 14  LVFCLGLWAIQVTSRTLQDGSMHERHERWMNHYGKVYKDHQEREKRFKIFTENMKYIEAF 73

Query: 61  NR-EGNQTYKLSLNEFADLTDEEFIASHTGYK--MPTRNISNQSQSYANNWFGYPDSRRG 117
           N  + N++YKL +N+FADLT+EEF+AS   +K  M +  I   +  Y N           
Sbjct: 74  NNGDNNESYKLGINQFADLTNEEFVASRNKFKGHMCSSIIRTTTFKYEN--------VSA 125

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-- 175
           +P ++DWR +GAVTPVKNQG CGCCW FSAVAA EGI K+ TG+L+SLSEQ+++DC    
Sbjct: 126 IPSTVDWRKKGAVTPVKNQGQCGCCWAFSAVAATEGIHKLSTGKLVSLSEQELVDCDTKG 185

Query: 176 -SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TS 233
             +GC GG MDDAF +II++ GL  E  YPYQ  +G CN  + +++A  I  Y+DVP  +
Sbjct: 186 VDQGCEGGLMDDAFKFIIQNHGLNTEAQYPYQGVDGTCNANKASIQATTITGYEDVPANN 245

Query: 234 ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWL 292
           E AL+ AV+ QP+SVAIDAS   F++Y  GVF G CG  L+H VT VGYG SN+G  YWL
Sbjct: 246 EQALQKAVANQPISVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGVSNDGTKYWL 305

Query: 293 IKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
           +KNSWG +WGE G+I M+R V  A GLCGIA +ASYP A
Sbjct: 306 VKNSWGTDWGEEGYIMMQRGVEAAEGLCGIAMQASYPTA 344


>gi|224114698|ref|XP_002316833.1| predicted protein [Populus trichocarpa]
 gi|222859898|gb|EEE97445.1| predicted protein [Populus trichocarpa]
          Length = 305

 Score =  348 bits (894), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 175/312 (56%), Positives = 218/312 (69%), Gaps = 15/312 (4%)

Query: 25  KHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFI 84
           +HE WMAQ  R YK   EK  R  IFK N  FIE FN+ G + YKLS+NEFADLT+EEF 
Sbjct: 3   RHETWMAQYGRAYKGHVEKERRLNIFKNNVEFIESFNKVGKKPYKLSVNEFADLTNEEFQ 62

Query: 85  ASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWI 144
           AS  GYKM     S+ ++      F Y ++   +P ++DWR +GAVTP+K+QG CGCCW 
Sbjct: 63  ASRNGYKMSAHLSSSSTKP-----FRY-ENVSAVPSTMDWRKKGAVTPIKDQGQCGCCWA 116

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---RGCYGGWMDDAFSYIIRSQGLTDER 201
           FSAVAA EGIT++ TG+LISLSEQ+++DC  S   +GC GG MDDAF +II+++GLT E 
Sbjct: 117 FSAVAATEGITQLSTGKLISLSEQELVDCDTSGEDQGCNGGLMDDAFDFIIQNKGLTTEA 176

Query: 202 VYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYY 260
            YPYQ  +G CN  +    AA+I  Y+DVP  SE AL  AV+ QPVSVAIDA    F++Y
Sbjct: 177 NYPYQGADGACNSGKA---AAKITGYEDVPANSEAALLKAVANQPVSVAIDAGGSAFQFY 233

Query: 261 SGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRDVGG-AGL 318
           S GVF G CG +L+H VT VGYG S++G  YWL+KNSWG +WGE G+IRM RD+    GL
Sbjct: 234 SSGVFTGDCGTDLDHGVTAVGYGMSDDGTKYWLVKNSWGTSWGENGYIRMERDIDAQEGL 293

Query: 319 CGIARKASYPIA 330
           CGIA +ASYP A
Sbjct: 294 CGIAMEASYPTA 305


>gi|535454|gb|AAA50755.1| cysteine proteinase [Alnus glutinosa]
          Length = 340

 Score =  348 bits (894), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 177/339 (52%), Positives = 228/339 (67%), Gaps = 18/339 (5%)

Query: 2   LIIMVTWASLV----MSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFI 57
           L++MVT  +L      +R+L + S+  +HE WMA   R YK+  EK  R+KIF++N   I
Sbjct: 10  LVVMVTLGALASQLAAARSLQDASMRERHEEWMASYGRVYKDINEKQKRYKIFEENVALI 69

Query: 58  EKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           E  N++ N+ YKLS+N+FADLT+EEF AS   +K    +  + S  Y N           
Sbjct: 70  ESSNKDANKPYKLSVNQFADLTNEEFKASRNRFKGHICSTKSTSFKYGN--------VSA 121

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS- 176
           +P ++DWR +GAVTPVK+QG CGCCW FSAVAA EGITK+ TG LISLSEQ+++DC  S 
Sbjct: 122 VPSAMDWRMKGAVTPVKDQGQCGCCWAFSAVAATEGITKLTTGELISLSEQELVDCDTSG 181

Query: 177 --RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TS 233
             +GC GG MD+AF++I  + GL  E  YPY+  +G CN  + A+ AA I  ++DVP  S
Sbjct: 182 VDQGCEGGLMDNAFTFIQHNHGLASEANYPYKGVDGTCNTNKQAIHAAEINGFEDVPANS 241

Query: 234 ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWL 292
           E AL  AV+ QPVSVAIDA   GF++YS GVF G CG  L+H VT VGYG+S++G  YWL
Sbjct: 242 EEALLNAVAHQPVSVAIDAGGSGFQFYSKGVFIGACGTQLDHGVTAVGYGTSDDGTKYWL 301

Query: 293 IKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           +KNSWG  WGE G+IRM+RDV    GLCGIA KASYP A
Sbjct: 302 VKNSWGTQWGEEGYIRMQRDVDAKEGLCGIAMKASYPTA 340


>gi|10336513|dbj|BAB13759.1| cysteine proteinase [Astragalus sinicus]
          Length = 343

 Score =  347 bits (889), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 174/338 (51%), Positives = 228/338 (67%), Gaps = 16/338 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L+ +  WA  V SRTL + S+  +H+ WM Q A+ Y +  E   RF+IFK+N  +IE  
Sbjct: 14  LLMCLGLWAVQVTSRTLQDASMYERHQQWMGQYAKIYNDHQEWEKRFQIFKENVNYIETS 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYK--MPTRNISNQSQSYANNWFGYPDSRRGL 118
           N+EG + YKL +N+F DLT+EEFIA    +K  M +  I   +  Y N           +
Sbjct: 74  NKEGGRFYKLGVNQFVDLTNEEFIAPRNRFKGHMCSSIIRTNTYKYEN--------VTTV 125

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--- 175
           P ++DWR +GAVTPVK+QG CGCCW FSAVAA EGI ++ TG+LISLSEQ+++DC     
Sbjct: 126 PSNVDWRQKGAVTPVKDQGQCGCCWAFSAVAATEGIHQLSTGKLISLSEQELVDCDTKGV 185

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SE 234
            +GC GG MDDAF +II++ GL  E  YPYQ  +G CN    ++ AA I SY+DVPT +E
Sbjct: 186 DQGCEGGLMDDAFKFIIQNHGLDTEAKYPYQGVDGTCNANEASINAATITSYEDVPTNNE 245

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLI 293
            AL+ AV+ QP+SVAIDAS   F++Y+ GVF G CG  L+H VT VGYG S++G  YWL+
Sbjct: 246 QALQKAVANQPISVAIDASGSDFQFYTSGVFTGSCGTELDHGVTAVGYGVSDDGTKYWLV 305

Query: 294 KNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
           KNSWG +WGE G+IRM+R V    GLCGIA +ASYPIA
Sbjct: 306 KNSWGTSWGEEGYIRMQRGVDAVEGLCGIAMQASYPIA 343


>gi|357477459|ref|XP_003609015.1| Cysteine proteinase [Medicago truncatula]
 gi|355510070|gb|AES91212.1| Cysteine proteinase [Medicago truncatula]
          Length = 345

 Score =  346 bits (887), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 171/326 (52%), Positives = 223/326 (68%), Gaps = 13/326 (3%)

Query: 12  VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGN-QTYKL 70
           V SR+L  DS+  +HE WM+Q ++ YK+  E+  R KIF  N  +IE FN + N + YKL
Sbjct: 26  VTSRSLQVDSMYERHEQWMSQYSKVYKDPQEREERHKIFTANVNYIEVFNNDANNKLYKL 85

Query: 71  SLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAV 130
            +N+FADLT+EEFIAS   +K       +   S A       ++   +P ++DWR +GAV
Sbjct: 86  GINQFADLTNEEFIASRNKFK------GHMCSSIAKTTTFKYENVSAIPSTVDWRKKGAV 139

Query: 131 TPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYGGWMDDA 187
           TPVKNQG CGCCW FSAVAA EGITK+ TG+L+SLSEQ+++DC      +GC GG MDDA
Sbjct: 140 TPVKNQGQCGCCWAFSAVAATEGITKLSTGKLVSLSEQELVDCDTKGVDQGCEGGLMDDA 199

Query: 188 FSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPV 246
           F +II++ GL+ E  YPYQ  +G CN  + ++ AA I  Y+DVP  +E AL+ AV+ QP+
Sbjct: 200 FKFIIQNHGLSTEAAYPYQGVDGTCNANKASIHAATITGYEDVPANNEQALQKAVANQPI 259

Query: 247 SVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGG 305
           SVAIDAS   F++Y  GVF+G CG  L+H VT VGYG  N+G  YWL+KNSWG +WGE G
Sbjct: 260 SVAIDASGSDFQFYKSGVFSGSCGTELDHGVTAVGYGVGNDGTKYWLVKNSWGTDWGEEG 319

Query: 306 FIRMRRDVGGA-GLCGIARKASYPIA 330
           +IRM+R V  A GLCGIA +ASYP A
Sbjct: 320 YIRMQRGVDAAEGLCGIAMQASYPTA 345


>gi|40806498|gb|AAR92154.1| putative cysteine protease 1 [Iris x hollandica]
          Length = 340

 Score =  345 bits (885), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 178/337 (52%), Positives = 228/337 (67%), Gaps = 19/337 (5%)

Query: 2   LIIMVTWASL-VMSRTLHED-SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           L+I+  WAS     R+L E+ S+  +HE WMAQ  R YKN AEKA RF+IF+ N   IE 
Sbjct: 15  LLIVAIWASQGEAGRSLGENKSMLERHEQWMAQHGRVYKNAAEKAHRFEIFRANVERIES 74

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLP 119
           FN E N  +KL +N+FADLT+EEF          TRN    S+  +   F Y ++   +P
Sbjct: 75  FNAE-NHKFKLGVNQFADLTNEEF---------KTRNTLKPSKMASTKSFKY-ENVTAVP 123

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGS 176
            ++DWR +GAVTP+K+QG CG CW FSAVAA EGITK+ TG+LISLSEQ+V+DC   S  
Sbjct: 124 ATMDWRTKGAVTPIKDQGQCGSCWAFSAVAATEGITKLSTGKLISLSEQEVVDCDVTSDD 183

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SEL 235
           +GC GG MDDAF YII+++G+T E  YPY+  +G CN ++ A  AA I  Y+DV   SE 
Sbjct: 184 QGCNGGEMDDAFEYIIKNKGITTEANYPYKAADGTCNTKKAASHAASITGYEDVTVNSEA 243

Query: 236 ALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIK 294
           AL  A + QP++VAIDA    F+ YS GVF G CG +L+H VT+VGYG++++G  YWL+K
Sbjct: 244 ALLKAAANQPIAVAIDAGDFAFQMYSSGVFTGDCGTDLDHGVTLVGYGATSDGTKYWLVK 303

Query: 295 NSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           NSWG +WGE G+IRM RDV    GLCGIA  ASYP A
Sbjct: 304 NSWGTSWGEDGYIRMERDVDAKEGLCGIAMDASYPTA 340


>gi|225446585|ref|XP_002280215.1| PREDICTED: vignain [Vitis vinifera]
          Length = 341

 Score =  344 bits (883), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 172/336 (51%), Positives = 226/336 (67%), Gaps = 14/336 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L  +  WAS   +R L E S+  +HE WMAQ  R YK+  EK+ R+KIFK N   IE F
Sbjct: 14  LLFFLAAWASQATARNLLEASMYERHEDWMAQYGRVYKDADEKSKRYKIFKDNVARIESF 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+  +++YKLS+NEFADLT+EEF AS   +K    +    S  Y        +    +P 
Sbjct: 74  NKAMDKSYKLSINEFADLTNEEFRASRNRFKAHICSTEATSFKY--------EHVAAVPS 125

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---R 177
           ++DWR +GAVTP+K+QG CG CW FSAVAA+EGIT++ TG+LISLSEQ+++DC  S   +
Sbjct: 126 TVDWRKKGAVTPIKDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSGEDQ 185

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GG MDDAF +I ++ GL  E  YPY   +G CN ++ A  AA+I  Y+DVP  +E A
Sbjct: 186 GCNGGLMDDAFKFIEQNHGLATEANYPYAGTDGTCNRKKAAHPAAKINGYEDVPANNEKA 245

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKN 295
           L+ AV+ QP++VAIDA    F++YS GVF G CG  L+H V  VGYG+S++G  YWL+KN
Sbjct: 246 LQKAVAHQPIAVAIDAGGFEFQFYSSGVFTGQCGTELDHGVAAVGYGTSDDGMKYWLVKN 305

Query: 296 SWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPIA 330
           SWG  WGE G+IRM+RDV    GLCGIA +ASYP A
Sbjct: 306 SWGTGWGEVGYIRMQRDVTAKEGLCGIAMQASYPTA 341


>gi|297851334|ref|XP_002893548.1| peptidase C1A papain family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339390|gb|EFH69807.1| peptidase C1A papain family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 346

 Score =  344 bits (883), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 184/349 (52%), Positives = 233/349 (66%), Gaps = 25/349 (7%)

Query: 1   MLIIMVTWASLVMSR---------TLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFK 51
           +L + V+   L MS          T HE  ++  H+ WM + +R Y ++ EK MRF +FK
Sbjct: 4   ILFMFVSLTILSMSLKVSQATSRVTFHEPIVAEHHQQWMTRFSRVYSDELEKQMRFDVFK 63

Query: 52  KNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYK----MPTRNISNQSQSYANN 107
           KN +FIEKFN++G++TYKL +NEFAD T EEFIA+HTG K    +P+    ++     N 
Sbjct: 64  KNLKFIEKFNKKGDRTYKLGVNEFADWTKEEFIATHTGLKGFNGIPSSEFVDEMIPSWN- 122

Query: 108 WFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSE 167
              +  S    P   DWR  GAVTPVK QG CGCCW FS+VAAVEG+TKI  G L+SLSE
Sbjct: 123 ---WNVSDVAGPEIKDWRYEGAVTPVKYQGQCGCCWAFSSVAAVEGLTKIVGGNLVSLSE 179

Query: 168 QQVLDCSGSR--GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIR 225
           QQ+LDC   R  GC GG M DAFSYII+++G+  E  YPYQ  EG C +   A  +A IR
Sbjct: 180 QQLLDCDRERDNGCNGGIMSDAFSYIIKNRGIASEASYPYQETEGTCRYN--AKPSAWIR 237

Query: 226 SYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYG 283
            +Q VP+ +E AL  AVSRQPVSV+IDA  PGF +YSGGV+  P CG ++NHAVT VGYG
Sbjct: 238 GFQTVPSNNERALLEAVSRQPVSVSIDADGPGFMHYSGGVYDEPYCGTDVNHAVTFVGYG 297

Query: 284 SSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPIA 330
           +S EG  YWL KNSWG+ WGE G+IR+RRDV    G+CG+A+ A YP+A
Sbjct: 298 TSPEGIKYWLAKNSWGETWGENGYIRIRRDVAWPQGMCGVAQYAFYPVA 346


>gi|37780047|gb|AAP32196.1| cysteine protease 8 [Trifolium repens]
          Length = 343

 Score =  344 bits (882), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 169/338 (50%), Positives = 226/338 (66%), Gaps = 16/338 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           ++  +  +A  V SRTL +DS+  +H  WM+Q  + YK+  E+  RFKIF +N  ++E  
Sbjct: 14  LVFCLGLFAIQVTSRTLQDDSMYERHGQWMSQYGKIYKDHQERETRFKIFTENVNYVEAS 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYK--MPTRNISNQSQSYANNWFGYPDSRRGL 118
           N +  ++YKL +N+FADLT+EEF+AS   +K  M +      +  Y N           +
Sbjct: 74  NADDTKSYKLGINQFADLTNEEFVASRNKFKGHMCSSITRTTTFKYEN--------VSAI 125

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--- 175
           P ++DWR +GAVTPVKNQG CGCCW FSAVAA EGI K+ TG+LISLSEQ+++DC     
Sbjct: 126 PSTVDWRKKGAVTPVKNQGQCGCCWAFSAVAATEGIHKLSTGKLISLSEQELVDCDTKGV 185

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSE 234
            +GC GG MDDAF +II++ GL+ E  YPY+  +G CN  + +++A  I  Y+DVP  SE
Sbjct: 186 DQGCEGGLMDDAFKFIIQNHGLSTEAQYPYEGVDGTCNANKASVQAVTITGYEDVPANSE 245

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLI 293
            AL+ AV+ QP+SVAIDAS   F++Y  GVF G CG  L+H VT VGYG SN+G  YWL+
Sbjct: 246 QALQKAVANQPISVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGVSNDGTKYWLV 305

Query: 294 KNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
           KNSWG +WGE G+I M+R V  A GLCGIA +ASYP A
Sbjct: 306 KNSWGTDWGEEGYIMMQRGVEAAEGLCGIAMQASYPTA 343


>gi|225446589|ref|XP_002280263.1| PREDICTED: vignain [Vitis vinifera]
          Length = 339

 Score =  343 bits (880), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 175/336 (52%), Positives = 231/336 (68%), Gaps = 16/336 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L I+  WAS   SR+LHE S+  +HE WMA+  R YK+  EK  RFKIFK N   IE F
Sbjct: 14  LLFILAAWASQATSRSLHEASMYERHEDWMARYGRMYKDANEKEKRFKIFKDNVARIESF 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+  ++TYKLS+NEFADLT+EEF +    +K    +I +++ +     F Y ++   +P 
Sbjct: 74  NKAMDKTYKLSINEFADLTNEEFRSLRNRFKA---HICSEATT-----FKY-ENVTAVPS 124

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SR 177
           +IDWR +GAVTP+K+Q  CGCCW FSAVAA EGIT+I TG+LISLSEQ+++DC     ++
Sbjct: 125 TIDWRKKGAVTPIKDQQQCGCCWAFSAVAATEGITQITTGKLISLSEQELVDCDTGGENQ 184

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GG MDDAF + I+  GL  E  YPY+  +G CN ++ A  AA+I+ Y+DVP  +E A
Sbjct: 185 GCSGGLMDDAFRF-IKIHGLASEATYPYEGDDGTCNSKKEAHPAAKIKGYEDVPANNEKA 243

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKN 295
           L+ AV+ QPV+VAIDA    F++Y+ GVF G CG  L+H V  VGYG  ++G  YWL+KN
Sbjct: 244 LQKAVAHQPVAVAIDAGGFEFQFYTSGVFTGQCGTELDHGVAAVGYGIGDDGMMYWLVKN 303

Query: 296 SWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPIA 330
           SWG  WGE G+IRM+RDV    GLCGIA +ASYP A
Sbjct: 304 SWGTGWGEEGYIRMQRDVTAKEGLCGIAMQASYPTA 339


>gi|255568297|ref|XP_002525123.1| cysteine protease, putative [Ricinus communis]
 gi|223535582|gb|EEF37250.1| cysteine protease, putative [Ricinus communis]
          Length = 349

 Score =  343 bits (879), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 175/339 (51%), Positives = 224/339 (66%), Gaps = 19/339 (5%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++   A    SR LHE  ++ +HE WMA+  + YK+  EK  RF+IFK N  FIE F
Sbjct: 14  LFFVLAMCADQAASRELHELEMTGRHEKWMAKHGKVYKDDKEKLRRFQIFKSNVVFIESF 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMP---TRNISNQSQSYANNWFGYPDSRRG 117
           N  GN++Y L +N+FADLT+EEF A   GYK P   +R I+          F Y ++   
Sbjct: 74  NTAGNKSYMLGINKFADLTNEEFRAFWNGYKRPLGASRKITP---------FKY-ENVTA 123

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           LP SIDWR++GAVTP+K+QG CG CW FSAVAA EGI K+RTG+L+SLSEQ+++DC    
Sbjct: 124 LPSSIDWRSKGAVTPIKDQGVCGSCWAFSAVAATEGIHKLRTGKLVSLSEQELVDCDVKG 183

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TS 233
             +GC GG M DAF +I R  G+T E  YPYQ R+G C+ ++ A +A +I  YQ VP  S
Sbjct: 184 QDKGCQGGLMVDAFKFIKRHGGMTSEANYPYQGRDGKCDTKKEASRAVKITGYQAVPKNS 243

Query: 234 ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWL 292
           E AL  AV+ QPVSVAIDA S  F++Y  G+F G CG ++NH V  VGYG SN G  YW+
Sbjct: 244 EAALLKAVANQPVSVAIDAGSLSFQFYRSGIFTGICGKDINHGVAAVGYGRSNSGSKYWI 303

Query: 293 IKNSWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPIA 330
           +KNSWG  WGE G+IRM+RDV    GLCGIA + SYP A
Sbjct: 304 VKNSWGTEWGEKGYIRMKRDVRSKEGLCGIAMECSYPTA 342


>gi|297826875|ref|XP_002881320.1| hypothetical protein ARALYDRAFT_321132 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327159|gb|EFH57579.1| hypothetical protein ARALYDRAFT_321132 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 341

 Score =  342 bits (877), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 177/320 (55%), Positives = 228/320 (71%), Gaps = 12/320 (3%)

Query: 16  TLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEF 75
           T HE S   KHE WMA+ +R Y+++ EK MR  +FKKN +FIE FN++GN++YKL +NEF
Sbjct: 29  TFHEPSSLEKHEQWMARFSRVYRDELEKQMRRDVFKKNLKFIENFNKKGNKSYKLGVNEF 88

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
           AD T+EEF+A HTG K  +  + +++ S + +W    +    +  S DWRA GAVTPVK 
Sbjct: 89  ADWTNEEFLAIHTGLKGLSSKVVDETIS-SRSW----NISDMVGVSKDWRAEGAVTPVKY 143

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSYIIR 193
           QG CGCCW FSAVAAVEG+TKI  G L+SLSEQQ+LDC     RGC GG M DAF+YII+
Sbjct: 144 QGQCGCCWAFSAVAAVEGVTKIAGGNLVSLSEQQLLDCDREYDRGCDGGIMSDAFNYIIQ 203

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDA 252
           ++G+  E  Y YQ  +G C  +  A  AARI  +Q VP+ +E AL  AVSRQPVSV++DA
Sbjct: 204 NRGIASENDYSYQGSDGRC--RSSARPAARISGFQTVPSNNEQALLEAVSRQPVSVSMDA 261

Query: 253 SSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRR 311
           +  GF +YSGGV+ GPCG + NHAVT VGYG+S +G  YWL KNSWG+ WGE G+IR+RR
Sbjct: 262 NGDGFMHYSGGVYDGPCGTSSNHAVTFVGYGTSQDGTKYWLAKNSWGETWGEKGYIRIRR 321

Query: 312 DVG-GAGLCGIARKASYPIA 330
           DV    G+CG+A+ A YP+A
Sbjct: 322 DVAWPQGMCGVAQYAFYPVA 341


>gi|37780051|gb|AAP32198.1| cysteine protease 12 [Trifolium repens]
          Length = 343

 Score =  342 bits (876), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 172/339 (50%), Positives = 223/339 (65%), Gaps = 18/339 (5%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +   +   A  V SRTL +DSI  +HE WM    + YKN  E+  R +IF +N ++IE  
Sbjct: 14  LFFCLGLLAIQVTSRTLQDDSIFERHEQWMTHYGKVYKNPQEREKRLRIFTENLKYIEAS 73

Query: 61  NREGNQT-YKLSLNEFADLTDEEFIASHTGYK--MPTRNISNQSQSYANNWFGYPDSRRG 117
           N  GN+  YKL +N+FADLT+EEFIAS   +K  M +  I   +  Y N           
Sbjct: 74  NNAGNKKPYKLGINQFADLTNEEFIASRNKFKGHMCSSIIRTTTFKYENT---------S 124

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS- 176
           +P ++DWR +GAVTPVKNQG CGCCW FSA+AA EGI KI TG+L+SLSEQ+++DC  + 
Sbjct: 125 VPSTVDWRKKGAVTPVKNQGQCGCCWAFSAIAATEGIHKISTGKLVSLSEQELVDCDTNG 184

Query: 177 --RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TS 233
             +GC GG MDDAF +II++ G++ E  YPYQ  +G C     +  AA I  Y+DVP  +
Sbjct: 185 VDQGCEGGLMDDAFKFIIQNNGISTEAGYPYQGVDGTCKANEASTSAATITGYEDVPANN 244

Query: 234 ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWL 292
           E AL+ AV+ QP+SVAIDAS   F++Y  GVF G CG  L+H VT VGYG SN+G  YWL
Sbjct: 245 ENALQKAVANQPISVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGISNDGTKYWL 304

Query: 293 IKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
           +KNSWG +WGE G+IRM+R +  A GLCGIA +ASYP A
Sbjct: 305 VKNSWGTDWGEEGYIRMQRSIDAAEGLCGIAMQASYPTA 343


>gi|144905116|dbj|BAF56430.1| cysteine proteinase [Lotus japonicus]
          Length = 341

 Score =  342 bits (876), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 171/335 (51%), Positives = 225/335 (67%), Gaps = 12/335 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L++    +    +RTL + S+  +HE WMAQ  + YK+  EK +R KIFK+N + IE F
Sbjct: 14  LLLVFGFLSFEANARTLEDASMHERHEQWMAQYGKVYKDSYEKELRSKIFKENVQRIEAF 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N  GN++YKL +N+FADLT+EEF A +   +      SN +++     F Y +    +P 
Sbjct: 74  NNAGNKSYKLGINQFADLTNEEFKARN---RFKGHMCSNSTRTPT---FKY-EHVTSVPA 126

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SR 177
           S+DWR +GAVTP+K+QG CGCCW FSAVAA EGITK+ TG+LISLSEQ+++DC      +
Sbjct: 127 SLDWRQKGAVTPIKDQGQCGCCWAFSAVAATEGITKLSTGKLISLSEQELVDCDTKGVDQ 186

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GG MDDAF +I++++GL  E  YPYQ  +  CN    A  AA I+ ++DVP  SE A
Sbjct: 187 GCEGGLMDDAFKFIMQNKGLNTEAKYPYQGVDATCNANAEAKDAASIKGFEDVPANSESA 246

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNS 296
           L  AV+ QP+SVAIDAS   F++YS GVF G CG  L+H VT VGYGS     YWL+KNS
Sbjct: 247 LLKAVANQPISVAIDASGSEFQFYSSGVFTGSCGTELDHGVTAVGYGSDGGTKYWLVKNS 306

Query: 297 WGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           WG+ WGE G+IRM+RDV    GLCG A +ASYP A
Sbjct: 307 WGEQWGEQGYIRMQRDVAAEEGLCGFAMQASYPTA 341


>gi|409190991|gb|AFV30165.1| cysteine proteinase [Lotus japonicus]
          Length = 342

 Score =  342 bits (876), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 170/336 (50%), Positives = 224/336 (66%), Gaps = 13/336 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +++ +  WA  V SRTL + S+  +HE WMA+  R YK+  EK  RF IFK+N  +IE  
Sbjct: 14  LVLCLGLWAFQVSSRTLQDASMQERHEQWMARYGRVYKDLQEKEKRFSIFKENVNYIEAS 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N  G++ YKL +N+FADLT+EEFIA+   +K    +   ++ +     F Y +     P 
Sbjct: 74  NNAGDKPYKLGVNQFADLTNEEFIATRNKFKGHMSSSITRTTT-----FKYENVTA--PS 126

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---R 177
           ++DWR  GAVTPVKNQG+CGCCW FSAVAA EGI K+ TG L+SLSEQ+++DC  S   +
Sbjct: 127 TVDWRQEGAVTPVKNQGTCGCCWAFSAVAATEGIHKLSTGNLVSLSEQELVDCDTSGADQ 186

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GG MDDAF +II++ GL  E  YPYQ  +G CN    A   A I  Y+DVP+ +E A
Sbjct: 187 GCQGGLMDDAFKFIIQNGGLNTEAQYPYQGVDGTCNTNEEATHVATITGYEDVPSNNEQA 246

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKN 295
           L+ AV+ QP+S+AIDAS   F+ Y  GVF G CG  L+H V +VGYG S++G  YWL+KN
Sbjct: 247 LQQAVANQPISIAIDASGSDFQNYQSGVFTGSCGTQLDHGVAVVGYGVSDDGTKYWLVKN 306

Query: 296 SWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           SWG +WGE G+IRM+RDV    GLCG+A + SYP A
Sbjct: 307 SWGADWGEEGYIRMQRDVDAPEGLCGLAMQPSYPTA 342


>gi|37780045|gb|AAP32195.1| cysteine protease 5 [Trifolium repens]
          Length = 343

 Score =  342 bits (876), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 172/339 (50%), Positives = 223/339 (65%), Gaps = 18/339 (5%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +   +   A  V SRTL +DSI  +HE WM    + YKN  E+  R +IF +N ++IE  
Sbjct: 14  LFFCLGLLAIQVTSRTLQDDSIFERHEQWMTHYGKVYKNPQEREKRLRIFTENLKYIEAS 73

Query: 61  NREGN-QTYKLSLNEFADLTDEEFIASHTGYK--MPTRNISNQSQSYANNWFGYPDSRRG 117
           N  GN + YKL +N+FADLT+EEFIAS   +K  M +  I   +  Y N           
Sbjct: 74  NNAGNNKPYKLGINQFADLTNEEFIASRNKFKGHMCSSIIRTTTFKYENT---------S 124

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS- 176
           +P ++DWR +GAVTPVKNQG CGCCW FSA+AA EGI KI TG+L+SLSEQ+++DC  + 
Sbjct: 125 VPSTVDWRKKGAVTPVKNQGQCGCCWAFSAIAATEGIHKISTGKLVSLSEQELVDCDTNG 184

Query: 177 --RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TS 233
             +GC GG MDDAF +II++ G++ E  YPYQ  +G C     +  AA I  Y+DVP  +
Sbjct: 185 VDQGCEGGLMDDAFKFIIQNNGISTEAGYPYQGVDGTCKANEASTSAATITGYEDVPANN 244

Query: 234 ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWL 292
           E AL+ AV+ QP+SVAIDAS   F++Y  GVF G CG  L+H VT VGYG SN+G  YWL
Sbjct: 245 ENALQKAVANQPISVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGISNDGTKYWL 304

Query: 293 IKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
           +KNSWG +WGE G+IRM+R +  A GLCGIA +ASYP A
Sbjct: 305 VKNSWGTDWGEEGYIRMQRSIDAAEGLCGIAMQASYPTA 343


>gi|224135841|ref|XP_002327317.1| predicted protein [Populus trichocarpa]
 gi|222835687|gb|EEE74122.1| predicted protein [Populus trichocarpa]
          Length = 342

 Score =  340 bits (873), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 168/338 (49%), Positives = 223/338 (65%), Gaps = 16/338 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
            ++I+  WA  V SR L E S+SA+HE WM    + Y + AEK  RF+IFK N  +IE F
Sbjct: 13  FILILGMWAYEVASRELQEPSMSARHEQWMETFGKVYADAAEKERRFEIFKDNVEYIESF 72

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMP--TRNISNQSQSYANNWFGYPDSRRGL 118
           N  GN+ YKLS+N+FADLT+EE   +  GY+ P  TR +   S  Y N           +
Sbjct: 73  NTAGNKPYKLSVNKFADLTNEELKVARNGYRRPLQTRPMKVTSFKYEN--------VTAV 124

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--- 175
           P ++DWR +GAVTP+K+QG CG CW FS VAA EGI ++ TG+L+SLSEQ+++DC     
Sbjct: 125 PATMDWRKKGAVTPIKDQGQCGSCWAFSTVAATEGINQLTTGKLVSLSEQELVDCDTQGE 184

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SE 234
            +GC GG M+D F +II++ G+T E  YPYQ  +G CN ++ A + A+I  Y+ VP  SE
Sbjct: 185 DQGCEGGLMEDGFEFIIKNHGITTEANYPYQAADGTCNSKKEASRIAKITGYESVPANSE 244

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLI 293
            AL  AV+ QP+SV+IDA    F++YS GVF G CG  L+H VT VGYG +++G  YWL+
Sbjct: 245 AALLKAVASQPISVSIDAGGSDFQFYSSGVFTGQCGTELDHGVTAVGYGETSDGTKYWLV 304

Query: 294 KNSWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPIA 330
           KNSWG +WGE G+IRM+RD     GLCGIA  +SYP A
Sbjct: 305 KNSWGTSWGEEGYIRMQRDTEAEEGLCGIAMDSSYPTA 342


>gi|356515048|ref|XP_003526213.1| PREDICTED: vignain-like [Glycine max]
          Length = 350

 Score =  340 bits (873), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 168/334 (50%), Positives = 223/334 (66%), Gaps = 14/334 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +++++    S VMSR LHE S+S +HE WM +  + YK+ AEK  R  IFK N  FIE F
Sbjct: 13  LVLLLSICTSQVMSRNLHEASMSERHEQWMKKYGKVYKDAAEKQKRLLIFKDNVEFIESF 72

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N  GN+ YKLS+N  AD T+EEF+ASH GYK           S++   F Y +    +P 
Sbjct: 73  NAAGNKPYKLSINHLADQTNEEFVASHNGYKYKG--------SHSQTPFKYGNVTD-IPT 123

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGC 179
           ++DWR  GAVT VK+QG CG CW FS VAA EGI +I TG L+SLSEQ+++DC S   GC
Sbjct: 124 AVDWRQNGAVTAVKDQGQCGSCWAFSTVAATEGIYQISTGMLMSLSEQELVDCDSVDHGC 183

Query: 180 YGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALR 238
            GG M+D F +II++ G++ E  YPY   +G C+  + A  AA+I+ Y+ VP  SE AL+
Sbjct: 184 DGGLMEDGFEFIIKNGGISSEANYPYTAVDGTCDASKEASPAAQIKGYETVPANSEEALQ 243

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG--PYWLIKNS 296
            AV+ QPVSV+IDA   GF++YS GVF G CG  L+H VT+VGYG++++G   YW++KNS
Sbjct: 244 QAVANQPVSVSIDAGGSGFQFYSSGVFTGQCGTQLDHGVTVVGYGTTDDGTHEYWIVKNS 303

Query: 297 WGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
           WG  WGE G+IRM+R +    GLCGIA  ASYP+
Sbjct: 304 WGTQWGEEGYIRMQRGIDAQEGLCGIAMDASYPM 337


>gi|144905104|dbj|BAF56427.1| cysteine proteinase [Lotus japonicus]
          Length = 342

 Score =  340 bits (871), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 168/336 (50%), Positives = 224/336 (66%), Gaps = 13/336 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +++ +  WA  V SRTL + S+  +HE WMA+  + YK+  EK  RF IF++N ++IE  
Sbjct: 14  LVLCLGLWAFQVSSRTLQDASMHERHEQWMARYGKVYKDLQEKEKRFNIFQENVKYIEAS 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N  GN+ YKL +N+F DLT++EFIA+   +K    +   ++ +     F Y +     P 
Sbjct: 74  NNAGNKPYKLGVNQFTDLTNKEFIATRNKFKGHMSSSITRTTT-----FKYENVTA--PS 126

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---R 177
           ++DWR  GAVTPVKNQG+CGCCW FSAVAA EGI K+ TG L+SLSEQ+++DC  S   +
Sbjct: 127 TVDWRQEGAVTPVKNQGTCGCCWAFSAVAATEGIHKLSTGNLVSLSEQELVDCDTSGADQ 186

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GG MDDAF +II++ GL  E  YPYQ  +G CN        A I  Y+DVP+ +E A
Sbjct: 187 GCQGGLMDDAFKFIIQNGGLNTEAQYPYQGVDGTCNTNEEVTHVATITGYEDVPSNNEQA 246

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKN 295
           L+ AV+ QP+SVAIDAS   F+ Y  GVF G CG  L+H V +VGYG S++G  YWL+KN
Sbjct: 247 LQQAVANQPISVAIDASGSDFQNYQSGVFTGSCGTQLDHGVAVVGYGVSDDGTKYWLVKN 306

Query: 296 SWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           SWG++WGE G+IRM+RDV    GLCGIA + SYP A
Sbjct: 307 SWGEDWGEEGYIRMQRDVEAPEGLCGIAMQPSYPTA 342


>gi|224081320|ref|XP_002306369.1| predicted protein [Populus trichocarpa]
 gi|222855818|gb|EEE93365.1| predicted protein [Populus trichocarpa]
          Length = 340

 Score =  339 bits (870), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 169/335 (50%), Positives = 223/335 (66%), Gaps = 13/335 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L ++  W S   +RTL + S+  +HE WMAQ  R YK+ AEK  R+ IFK+N   I+ F
Sbjct: 14  LLFVLGAWPSKSAARTLQDVSMYERHEQWMAQYGRVYKDDAEKETRYNIFKENVARIDAF 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N +  ++YKL +N+FADL++EEF AS   +K    +       Y N           +P 
Sbjct: 74  NSQTGKSYKLGVNQFADLSNEEFKASRNRFKGHMCSPQAGPFRYEN--------VSAVPA 125

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SR 177
           ++DWR +GAVTPVK+QG CGCCW FSAVAA+EGI ++ TG+LISLSEQ+V+DC      +
Sbjct: 126 TMDWRKKGAVTPVKDQGQCGCCWAFSAVAAMEGINQLTTGKLISLSEQEVVDCDTKGEDQ 185

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GG MDDAF +I +++GLT E  YPY   +G CN Q+ A  AA+I  ++DVP  SE A
Sbjct: 186 GCNGGLMDDAFKFIEQNKGLTTEANYPYTGTDGTCNTQKEATHAAKITGFEDVPANSEAA 245

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNS 296
           L  AV++QPVSVAIDA    F++YS G+F G CG  L+H VT VGYG S+   YWL+KNS
Sbjct: 246 LMKAVAKQPVSVAIDAGGFEFQFYSSGIFTGSCGTQLDHGVTAVGYGISDGTKYWLVKNS 305

Query: 297 WGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           WG  WGE G+IRM++D+    GLCGIA +ASYP A
Sbjct: 306 WGAQWGEEGYIRMQKDISAKEGLCGIAMQASYPSA 340


>gi|144905108|dbj|BAF56428.1| cysteine proteinase [Lotus japonicus]
          Length = 342

 Score =  339 bits (869), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 171/336 (50%), Positives = 225/336 (66%), Gaps = 13/336 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L++    A    +RTL + S+  +HE WM Q  + Y +  EK +R  IFK+N + IE F
Sbjct: 14  LLLVFGFLAFEANARTLEDVSLKERHEQWMTQYGKVYTDSYEKELRSNIFKENVQRIEAF 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N  GN+ YKL +N+FADLT+EEF A +   +      SN +++     F Y D    +P 
Sbjct: 74  NNAGNKPYKLGINQFADLTNEEFKARN---RFKGHMCSNSTRTPT---FKYEDVSS-VPA 126

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SR 177
           S+DWR +GAVTP+K+QG CGCCW FSAVAA EGITK+ TG+LISLSEQ+++DC      +
Sbjct: 127 SLDWRQKGAVTPIKDQGQCGCCWAFSAVAATEGITKLSTGKLISLSEQELVDCDTKGVDQ 186

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELA 236
           GC GG MDDAF +I++++GL  E  YPYQ  +  CN    A  AA I+ ++DVP  SE A
Sbjct: 187 GCEGGLMDDAFKFIMQNKGLNTEAKYPYQGVDATCNANAEAKDAASIKGFEDVPANSESA 246

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKN 295
           L  AV+ QP+SVAIDAS   F++YS G+F G CG  L+H VT VGYG S++G  YWL+KN
Sbjct: 247 LLKAVANQPISVAIDASGSEFQFYSSGLFTGSCGTELDHGVTAVGYGVSDDGTKYWLVKN 306

Query: 296 SWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           SWG+ WGE G+IRM+RDV    GLCGIA +ASYP A
Sbjct: 307 SWGEQWGEEGYIRMQRDVAAEEGLCGIAMQASYPTA 342


>gi|224076970|ref|XP_002305073.1| predicted protein [Populus trichocarpa]
 gi|222848037|gb|EEE85584.1| predicted protein [Populus trichocarpa]
          Length = 340

 Score =  338 bits (868), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 171/335 (51%), Positives = 222/335 (66%), Gaps = 13/335 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAK-HELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
            L+I+  WA+ +  R L E     K HE WMAQ  R Y +  EK  R+ IFK+N   IE 
Sbjct: 14  FLLILAAWATKIACRPLDEQEYMLKRHEEWMAQHGRVYGDMKEKEKRYLIFKENIERIEA 73

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLP 119
           FN   ++ YKL +N+FADLT+EEF A + GYK  +  + + S  Y N           +P
Sbjct: 74  FNNGSDRGYKLGVNKFADLTNEEFRAMYHGYKRQSSKLMSSSFRYEN--------LSDIP 125

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-GSRG 178
            S+DWR  GAVTPVK+QG+CGCCW FS VAA+EGI K++TG LISLSEQQ++DC+ G++G
Sbjct: 126 TSMDWRNDGAVTPVKDQGTCGCCWAFSTVAAIEGIIKLQTGNLISLSEQQLVDCTAGNKG 185

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELAL 237
           C GG MD AF YIIR+ GLT E  YPYQ  +G C+ ++ A   A+I  Y+DVP  +E AL
Sbjct: 186 CQGGLMDTAFQYIIRNGGLTSEDNYPYQGVDGTCSSEKAASTEAQITGYEDVPQNNENAL 245

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNS 296
             AV++QPVSV +D     F++Y  GVF G CG   NHAVT +GYG+  +G  YWL+KNS
Sbjct: 246 LQAVAKQPVSVGVDGGGNDFQFYKSGVFNGDCGTQQNHAVTAIGYGTDIDGTDYWLVKNS 305

Query: 297 WGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
           WG +WGE G++RMRR +G + GLCG+A  ASYP A
Sbjct: 306 WGTSWGENGYMRMRRGIGSSEGLCGVAMDASYPTA 340


>gi|356577811|ref|XP_003557016.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  338 bits (867), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 170/338 (50%), Positives = 221/338 (65%), Gaps = 16/338 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           ML+ M   A  V  R+L + S+  +HE WM +  + YK+  E+  RF+IFK+N  +IE F
Sbjct: 14  MLLCMAFLAFQVTCRSLQDASMYERHEQWMTRYGKVYKDPQEREKRFRIFKENVNYIEAF 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYK--MPTRNISNQSQSYANNWFGYPDSRRGL 118
           N   N+ YKL++N+FADLT+EEFIA    +K  M +  I   +  Y N           +
Sbjct: 74  NNAANKRYKLAINQFADLTNEEFIAPRNRFKGHMCSSIIRTTTFKYEN--------VTAV 125

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--- 175
           P ++DWR +GAVTP+K+QG CGCCW FSAVAA EGI  + +G+LISLSEQ+++DC     
Sbjct: 126 PSTVDWRQKGAVTPIKDQGQCGCCWAFSAVAATEGIHALTSGKLISLSEQELVDCDTKGV 185

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSE 234
            +GC GG MDDAF ++I++ GL  E  YPY+  +G CN    A  AA I  Y+DVP  +E
Sbjct: 186 DQGCEGGLMDDAFKFVIQNHGLNTEANYPYKGVDGKCNVNEAANDAATITGYEDVPANNE 245

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLI 293
            AL+ AV+ QPVSVAIDAS   F++Y  GVF G CG  L+H VT VGYG SN+G  YWL+
Sbjct: 246 KALQKAVANQPVSVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGVSNDGTEYWLV 305

Query: 294 KNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           KNSWG  WGE G+IRM+R V    GLCGIA +ASYP A
Sbjct: 306 KNSWGTEWGEEGYIRMQRGVNSEEGLCGIAMQASYPTA 343


>gi|50355613|dbj|BAD29955.1| cysteine protease [Daucus carota]
          Length = 365

 Score =  337 bits (865), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 168/336 (50%), Positives = 228/336 (67%), Gaps = 14/336 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L  +   ASL  +R+L+E S++  H+ WMA+  R YK   EK  R  IF++N ++I+ F
Sbjct: 14  LLFTIGVLASLAAARSLNEASMTETHDQWMARYGRVYKTANEKNRRSTIFQENLKYIQTF 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+  N+ YKL +NEFADLT+EEF  S   +K       +   +   N F Y ++   +P 
Sbjct: 74  NKANNKPYKLGVNEFADLTNEEFTTSRNKFK-------SHVCATVTNVFRY-ENVTAVPA 125

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---R 177
           ++DWR +GAVTP+KNQG CGCCW FSAVAA+EGIT+++TG+LISLSEQ+++DC  +   +
Sbjct: 126 TMDWRKKGAVTPIKNQGQCGCCWAFSAVAAMEGITQLKTGKLISLSEQELVDCDTNGEDQ 185

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELA 236
           GC GG MD AF +I ++ GL+ E  YPY   +G CN  + A  AA I  ++DVP  SE A
Sbjct: 186 GCEGGLMDYAFDFIQQNHGLSTETNYPYSGTDGTCNANKEANHAATITGHEDVPANSESA 245

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKN 295
           L  AV+ QP+SVAIDAS   F++YS GVF G CG  L+H VT VGYG++ +G  YWL+KN
Sbjct: 246 LLKAVANQPISVAIDASGSDFQFYSSGVFTGECGTELDHGVTAVGYGTAADGTKYWLVKN 305

Query: 296 SWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
           SWG +WGE G+I+M+R V  A GLCGIA +ASYP A
Sbjct: 306 SWGTSWGEEGYIQMQRGVAAAEGLCGIAMQASYPTA 341


>gi|18403438|ref|NP_565780.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|2342728|gb|AAB67626.1| cysteine proteinase [Arabidopsis thaliana]
 gi|330253821|gb|AEC08915.1| cysteine proteinase-like protein [Arabidopsis thaliana]
          Length = 345

 Score =  337 bits (865), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 182/348 (52%), Positives = 237/348 (68%), Gaps = 30/348 (8%)

Query: 1   MLIIMVTW--ASLVMSRTL--HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRF 56
           +LII+ T    S   SRT+   E S+  KHE WMA+ +R Y+++ EK MR  +FKKN +F
Sbjct: 10  VLIILFTGFRISQATSRTVIFREQSMVDKHEQWMARFSREYRDELEKNMRRDVFKKNLKF 69

Query: 57  IEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPT---------RNISNQSQSYANN 107
           IE FN++GN++YKL +NEFAD T+EEF+A HTG K  T         + IS+Q+ + ++ 
Sbjct: 70  IENFNKKGNKSYKLGVNEFADWTNEEFLAIHTGLKGLTEVSPSKVVAKTISSQTWNVSDM 129

Query: 108 WFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSE 167
                     +  S DWRA GAVTPVK QG CGCCW FSAVAAVEG+ KI  G L+SLSE
Sbjct: 130 ----------VVESKDWRAEGAVTPVKYQGQCGCCWAFSAVAAVEGVAKIAGGNLVSLSE 179

Query: 168 QQVLDCSG--SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIR 225
           QQ+LDC     RGC GG M DAF+Y+++++G+  E  Y YQ  +G C  +  A  AARI 
Sbjct: 180 QQLLDCDREYDRGCDGGIMSDAFNYVVQNRGIASENDYSYQGSDGGC--RSNARPAARIS 237

Query: 226 SYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGS 284
            +Q VP+ +E AL  AVSRQPVSV++DA+  GF +YSGGV+ GPCG + NHAVT VGYG+
Sbjct: 238 GFQTVPSNNERALLEAVSRQPVSVSMDATGDGFMHYSGGVYDGPCGTSSNHAVTFVGYGT 297

Query: 285 SNEGP-YWLIKNSWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPIA 330
           S +G  YWL KNSWG+ WGE G+IR+RRDV    G+CG+A+ A YP+A
Sbjct: 298 SQDGTKYWLAKNSWGETWGEKGYIRIRRDVAWPQGMCGVAQYAFYPVA 345


>gi|357474573|ref|XP_003607571.1| Cysteine proteinase EP-B [Medicago truncatula]
 gi|34329348|gb|AAQ63885.1| putative cysteine proteinase [Medicago truncatula]
 gi|355508626|gb|AES89768.1| Cysteine proteinase EP-B [Medicago truncatula]
          Length = 345

 Score =  337 bits (865), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 173/339 (51%), Positives = 225/339 (66%), Gaps = 17/339 (5%)

Query: 1   MLIIMVTWASLVMSRTLHEDSIS-AKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           +   +  +A  V SRTL +DSI   KHE WM    + YK+  E+  R KIFK+N  +IE 
Sbjct: 15  LFFCLGLFAIQVTSRTLQDDSIIYEKHEQWMVHYGKVYKDLQERENRLKIFKENVNYIEA 74

Query: 60  FNREGN-QTYKLSLNEFADLTDEEFIASHTGYK-MPTRNISNQSQSYANNWFGYPDSRRG 117
            N  GN + YKL +N+FADLT+EEFIAS   +K     +I+  S       F Y ++   
Sbjct: 75  SNNAGNNKLYKLGINQFADLTNEEFIASRNKFKGHMCSSITKTST------FKYENAS-- 126

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-- 175
           +P ++DWR +GAVTPVKNQG CGCCW FSAVAA EGI K+ TG+L+SLSEQ+++DC    
Sbjct: 127 VPSTVDWRKKGAVTPVKNQGQCGCCWAFSAVAATEGIHKLSTGKLVSLSEQELVDCDTKG 186

Query: 176 -SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TS 233
             +GC GG MDDAF +II++ GL  E  YPYQ  +G C+  + ++ A  I  Y+DVP  +
Sbjct: 187 VDQGCEGGLMDDAFKFIIQNHGLNTEAQYPYQGVDGTCSANKASIHAVTITGYEDVPANN 246

Query: 234 ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWL 292
           E AL+ AV+ QP+SVAIDAS   F++Y  GVF G CG  L+H VT VGYG  N+G  YWL
Sbjct: 247 EQALQKAVANQPISVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGVGNDGTKYWL 306

Query: 293 IKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
           +KNSWG +WGE G+I+M+R V  A GLCGIA +ASYP A
Sbjct: 307 VKNSWGTDWGEEGYIKMQRGVDAAEGLCGIAMEASYPTA 345


>gi|357471211|ref|XP_003605890.1| Cysteine proteinase [Medicago truncatula]
 gi|355506945|gb|AES88087.1| Cysteine proteinase [Medicago truncatula]
          Length = 343

 Score =  337 bits (865), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 172/331 (51%), Positives = 224/331 (67%), Gaps = 16/331 (4%)

Query: 8   WASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNR-EGNQ 66
           +A  V SRTL +D +  +H  WM+Q  + YK+  E+  RFKIF +N  +IE FN+ + N+
Sbjct: 21  FAIQVTSRTLQDD-MYERHRQWMSQYGKVYKDSQEREKRFKIFTENVNYIEAFNKGDNNK 79

Query: 67  TYKLSLNEFADLTDEEFIASHTGYK-MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWR 125
            Y L +N+FADLT++EF +S   +K     +I+  S       F Y ++   +P S+DWR
Sbjct: 80  LYTLGVNQFADLTNDEFTSSRNKFKGHMCSSITRTST------FKYENAS-AIPSSVDWR 132

Query: 126 ARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYGG 182
            +GAVTPVKNQG CGCCW FSAVAA EGI K+ TG+LISLSEQ+++DC      +GC GG
Sbjct: 133 KKGAVTPVKNQGQCGCCWAFSAVAATEGIHKLSTGKLISLSEQELVDCDTKGVDQGCEGG 192

Query: 183 WMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAV 241
            MDDAF +II++ GL  E  YPYQ  +G CN  +G++ A  I  Y+DVPT +E AL+ AV
Sbjct: 193 LMDDAFKFIIQNHGLNTEANYPYQGVDGTCNANKGSINAVTITGYEDVPTNNEQALQKAV 252

Query: 242 SRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQN 300
           + QP+SVAIDAS   F++Y  GVF G CG  L+H VT VGYG SN+G  YWL+KNSWG  
Sbjct: 253 ANQPISVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGVSNDGTKYWLVKNSWGTE 312

Query: 301 WGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
           WGE G+I M+R V  A GLCGIA +ASYP A
Sbjct: 313 WGEEGYIMMQRGVDAAEGLCGIAMQASYPTA 343


>gi|357474527|ref|XP_003607548.1| Cysteine protease [Medicago truncatula]
 gi|358347211|ref|XP_003637653.1| Cysteine protease [Medicago truncatula]
 gi|355503588|gb|AES84791.1| Cysteine protease [Medicago truncatula]
 gi|355508603|gb|AES89745.1| Cysteine protease [Medicago truncatula]
          Length = 345

 Score =  337 bits (865), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 173/332 (52%), Positives = 223/332 (67%), Gaps = 17/332 (5%)

Query: 8   WASLVMSRTLHEDS-ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGN- 65
           +A  V SRTL +DS I  KHE WM    + YK+  E+  R KIFK+N  +IE  N  GN 
Sbjct: 22  FAIQVTSRTLQDDSNIYEKHEQWMVHYGKVYKDLQERENRLKIFKENVNYIEASNNAGNN 81

Query: 66  QTYKLSLNEFADLTDEEFIASHTGYK-MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDW 124
           + YKL +N+FADLT+EEFIAS   +K     +I+  S       F Y ++   +P ++DW
Sbjct: 82  KLYKLGINQFADLTNEEFIASRNKFKGHMCSSITKTST------FKYENAS--VPSTVDW 133

Query: 125 RARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYG 181
           R +GAVTPVKNQG CGCCW FSAVAA EGI K+ TG+L+SLSEQ+++DC      +GC G
Sbjct: 134 RKKGAVTPVKNQGQCGCCWAFSAVAATEGIHKLSTGKLVSLSEQELVDCDTKGVDQGCEG 193

Query: 182 GWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYA 240
           G MDDAF +II++ GL  E  YPYQ  +G C+  + ++ A  I  Y+DVP  +E AL+ A
Sbjct: 194 GLMDDAFKFIIQNHGLNTEAQYPYQGVDGTCSANKASIHAVTITGYEDVPANNEQALQKA 253

Query: 241 VSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQ 299
           V+ QP+SVAIDAS   F++Y  GVF G CG  L+H VT VGYG  N+G  YWL+KNSWG 
Sbjct: 254 VANQPISVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGVGNDGTKYWLVKNSWGT 313

Query: 300 NWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
           +WGE G+I+M+R V  A GLCGIA +ASYP A
Sbjct: 314 DWGEEGYIKMQRGVDAAEGLCGIAMEASYPTA 345


>gi|224093956|ref|XP_002310053.1| predicted protein [Populus trichocarpa]
 gi|224147016|ref|XP_002336386.1| predicted protein [Populus trichocarpa]
 gi|222834869|gb|EEE73318.1| predicted protein [Populus trichocarpa]
 gi|222852956|gb|EEE90503.1| predicted protein [Populus trichocarpa]
          Length = 340

 Score =  337 bits (865), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 167/335 (49%), Positives = 220/335 (65%), Gaps = 13/335 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L I+  W S   +RTL +  +  +HE WM Q  R YK+  E+A R+ IFK+N   I+ F
Sbjct: 14  LLFILGAWPSKSTARTLLDAPMYERHEQWMTQYGRVYKDDNERATRYSIFKENVARIDAF 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N +  ++YKL +N+FADLT+EEF AS   +K    +       Y N           +P 
Sbjct: 74  NSQTGKSYKLGVNQFADLTNEEFKASRNRFKGHMCSPQAGPFRYEN--------VSAVPS 125

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SR 177
           ++DWR  GAVTPVK+QG CGCCW FSAVAA+EGI K+ TG+LISLSEQ+V+DC      +
Sbjct: 126 TVDWRKEGAVTPVKDQGQCGCCWAFSAVAAMEGINKLTTGKLISLSEQEVVDCDTKGEDQ 185

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GG MDDAF +I +++GLT E  YPY+  +G CN  + A+ AA+I  ++DVP  SE A
Sbjct: 186 GCNGGLMDDAFKFIEQNKGLTTEANYPYKGTDGTCNTNKAAIHAAKITGFEDVPANSEAA 245

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNS 296
           L  AV++QPVSVAIDA    F++YS G+F G C   L+H VT VGYG S+   YWL+KNS
Sbjct: 246 LMKAVAKQPVSVAIDAGGSDFQFYSSGIFTGSCDTQLDHGVTAVGYGVSDGSKYWLVKNS 305

Query: 297 WGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           WG  WGE G+IRM++D+    GLCGIA +ASYP A
Sbjct: 306 WGAQWGEEGYIRMQKDISAKEGLCGIAMQASYPTA 340


>gi|356543124|ref|XP_003540013.1| PREDICTED: vignain-like [Glycine max]
 gi|356543126|ref|XP_003540014.1| PREDICTED: vignain-like [Glycine max]
          Length = 337

 Score =  337 bits (863), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 168/334 (50%), Positives = 220/334 (65%), Gaps = 13/334 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +++++    S VMSR LHE S+S +HE WM +  + YK+ AEK  R  IFK N  FIE F
Sbjct: 13  LVLLLSICTSQVMSRNLHEASMSERHEQWMKKYGKVYKDAAEKQKRLLIFKDNVEFIESF 72

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N  GN+ YKLS+N  AD T+EEF+ASH GYK           S++   F Y ++  G+P 
Sbjct: 73  NAAGNRPYKLSINHLADQTNEEFVASHNGYK--------HKGSHSQTPFKY-ENVTGVPN 123

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGC 179
           ++DWR  GAVT VK+QG CG CW FS VAA EGI +I T  L+SLSEQ+++DC S   GC
Sbjct: 124 AVDWRENGAVTAVKDQGQCGSCWAFSTVAATEGIYQITTSMLMSLSEQELVDCDSVDHGC 183

Query: 180 YGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALR 238
            GG+M+  F +II++ G++ E  YPY   +G C+  + A  AA+I+ Y+ VP  SE AL+
Sbjct: 184 DGGYMEGGFEFIIKNGGISSEANYPYTAVDGTCDANKEASPAAQIKGYETVPANSEDALQ 243

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSW 297
            AV+ QPVSV IDA    F++YS GVF G CG  L+H VT VGYGS+++G  YW++KNSW
Sbjct: 244 KAVANQPVSVTIDAGGSAFQFYSSGVFTGQCGTQLDHGVTAVGYGSTDDGTQYWIVKNSW 303

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           G  WGE G+IRM+R      GLCGIA  ASYP A
Sbjct: 304 GTQWGEEGYIRMQRGTDAQEGLCGIAMDASYPTA 337


>gi|30690594|ref|NP_564321.2| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|28393492|gb|AAO42167.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|332192920|gb|AEE31041.1| cysteine proteinase-like protein [Arabidopsis thaliana]
          Length = 355

 Score =  337 bits (863), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 181/349 (51%), Positives = 234/349 (67%), Gaps = 25/349 (7%)

Query: 1   MLIIMVTWASLVMSR---------TLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFK 51
           +L ++V+   L M+          T HE  ++  H+ WM + +R Y ++ EK MRF +FK
Sbjct: 13  ILFMLVSLTILSMNLKVSQATSRVTFHEPIVAEHHQQWMTRFSRVYSDELEKQMRFDVFK 72

Query: 52  KNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYK----MPTRNISNQSQSYANN 107
           KN +FIEKFN++G++TYKL +NEFAD T EEFIA+HTG K    +P+    ++    + N
Sbjct: 73  KNLKFIEKFNKKGDRTYKLGVNEFADWTREEFIATHTGLKGVNGIPSSEFVDEMIP-SWN 131

Query: 108 WFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSE 167
           W     + R    + DWR  GAVTPVK QG CGCCW FS+VAAVEG+TKI    L+SLSE
Sbjct: 132 WNVSDVAGR---ETKDWRYEGAVTPVKYQGQCGCCWAFSSVAAVEGLTKIVGNNLVSLSE 188

Query: 168 QQVLDCSGSR--GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIR 225
           QQ+LDC   R  GC GG M DAFSYII+++G+  E  YPYQ  EG C +      +A IR
Sbjct: 189 QQLLDCDRERDNGCNGGIMSDAFSYIIKNRGIASEASYPYQAAEGTCRYN--GKPSAWIR 246

Query: 226 SYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYG 283
            +Q VP+ +E AL  AVS+QPVSV+IDA  PGF +YSGGV+  P CG N+NHAVT VGYG
Sbjct: 247 GFQTVPSNNERALLEAVSKQPVSVSIDADGPGFMHYSGGVYDEPYCGTNVNHAVTFVGYG 306

Query: 284 SSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPIA 330
           +S EG  YWL KNSWG+ WGE G+IR+RRDV    G+CG+A+ A YP+A
Sbjct: 307 TSPEGIKYWLAKNSWGETWGENGYIRIRRDVAWPQGMCGVAQYAFYPVA 355


>gi|357474579|ref|XP_003607574.1| Cysteine protease [Medicago truncatula]
 gi|355508629|gb|AES89771.1| Cysteine protease [Medicago truncatula]
          Length = 345

 Score =  336 bits (861), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 175/332 (52%), Positives = 222/332 (66%), Gaps = 17/332 (5%)

Query: 8   WASLVMSRTLHEDSIS-AKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGN- 65
           +A  V SRTL +DSI   KHE WM    + YK+  E+  R KIFK+N  +IE  N  GN 
Sbjct: 22  FAIQVTSRTLQDDSIIYEKHEQWMVHYGKVYKDLQERENRLKIFKENVNYIEASNNAGNN 81

Query: 66  QTYKLSLNEFADLTDEEFIASHTGYK-MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDW 124
           + YKL +N+FAD+T+EEFIAS   +K     +I+  S       F Y ++   +P ++DW
Sbjct: 82  KLYKLGINQFADITNEEFIASRNKFKGHMCSSITKTST------FKYENAS--VPSTVDW 133

Query: 125 RARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYG 181
           R +GAVTPVKNQG CGCCW FSAVAA EGI K+ TG+L+SLSEQ+++DC      +GC G
Sbjct: 134 RKKGAVTPVKNQGQCGCCWAFSAVAATEGIHKLSTGKLVSLSEQELVDCDTKGVDQGCEG 193

Query: 182 GWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYA 240
           G MDDAF +II++ GL  E  YPYQ  +G C+    +  AA I  Y+DVP  +E AL+ A
Sbjct: 194 GLMDDAFKFIIQNHGLHTEAQYPYQGVDGTCSANETSTPAATIAGYEDVPANNENALQKA 253

Query: 241 VSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQ 299
           V+ QP+SVAIDAS   F++Y  GVF G CG  L+H VT VGYG SN+G  YWL+KNSWG 
Sbjct: 254 VANQPISVAIDASGSDFQFYKSGVFTGSCGTQLDHGVTAVGYGISNDGTKYWLVKNSWGN 313

Query: 300 NWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
           +WGE G+IRM+R V  A GLCGIA  ASYP A
Sbjct: 314 DWGEEGYIRMQRSVDAAQGLCGIAMMASYPTA 345


>gi|356521444|ref|XP_003529366.1| PREDICTED: thiol protease SEN102-like [Glycine max]
          Length = 340

 Score =  336 bits (861), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 174/334 (52%), Positives = 223/334 (66%), Gaps = 12/334 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
             ++ +T      SRTL E SI+ +HE WMA   R Y + AEK  R +IFK+N  FIEK 
Sbjct: 13  FFMLFLTCICRASSRTLSESSIATQHEEWMAMHDRVYADSAEKDRRQQIFKENLEFIEKH 72

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTG--YKMPTRNISNQSQSYANNWFGYPDSRRG- 117
           N EG + Y LSLN FADLT+EEF+ASHTG  YK PT+  S +     N+  G+     G 
Sbjct: 73  NNEGKKRYNLSLNSFADLTNEEFVASHTGALYKPPTQLGSFK----INHSLGFHKMSVGD 128

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR 177
           +  S+DWR RGAV  +KNQG CG CW FSAVAAVEGI +I+ G+L+SLSEQ ++DC+ + 
Sbjct: 129 IEASLDWRKRGAVNDIKNQGRCGSCWAFSAVAAVEGINQIKNGQLVSLSEQNLVDCASND 188

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELA 236
           GC+G +++ AF YI R  GL +E  YPY    G C+    +  A +IR YQ V P +E  
Sbjct: 189 GCHGQYVEKAFDYI-RDYGLANEEEYPYVETVGTCSGN--SNPAIQIRGYQSVTPQNEEQ 245

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNS 296
           L  AV+ QPVSV ++A   GF++YSGGVF+G CG  LNHAVTIVGYG   EG YWLI+NS
Sbjct: 246 LLTAVASQPVSVLLEAKGQGFQFYSGGVFSGECGTELNHAVTIVGYGEEAEGKYWLIRNS 305

Query: 297 WGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPI 329
           WG++WGEGG++++ RD G   GLCGI  +ASYP 
Sbjct: 306 WGKSWGEGGYMKLMRDTGNPQGLCGINMQASYPF 339


>gi|9502421|gb|AAF88120.1|AC021043_13 Putative cysteine proteinase [Arabidopsis thaliana]
          Length = 331

 Score =  336 bits (861), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 177/325 (54%), Positives = 225/325 (69%), Gaps = 16/325 (4%)

Query: 16  TLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEF 75
           T HE  ++  H+ WM + +R Y ++ EK MRF +FKKN +FIEKFN++G++TYKL +NEF
Sbjct: 13  TFHEPIVAEHHQQWMTRFSRVYSDELEKQMRFDVFKKNLKFIEKFNKKGDRTYKLGVNEF 72

Query: 76  ADLTDEEFIASHTGYK----MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVT 131
           AD T EEFIA+HTG K    +P+    ++    + NW     + R    + DWR  GAVT
Sbjct: 73  ADWTREEFIATHTGLKGVNGIPSSEFVDEMIP-SWNWNVSDVAGR---ETKDWRYEGAVT 128

Query: 132 PVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR--GCYGGWMDDAFS 189
           PVK QG CGCCW FS+VAAVEG+TKI    L+SLSEQQ+LDC   R  GC GG M DAFS
Sbjct: 129 PVKYQGQCGCCWAFSSVAAVEGLTKIVGNNLVSLSEQQLLDCDRERDNGCNGGIMSDAFS 188

Query: 190 YIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSV 248
           YII+++G+  E  YPYQ  EG C +      +A IR +Q VP+ +E AL  AVS+QPVSV
Sbjct: 189 YIIKNRGIASEASYPYQAAEGTCRYN--GKPSAWIRGFQTVPSNNERALLEAVSKQPVSV 246

Query: 249 AIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGF 306
           +IDA  PGF +YSGGV+  P CG N+NHAVT VGYG+S EG  YWL KNSWG+ WGE G+
Sbjct: 247 SIDADGPGFMHYSGGVYDEPYCGTNVNHAVTFVGYGTSPEGIKYWLAKNSWGETWGENGY 306

Query: 307 IRMRRDVG-GAGLCGIARKASYPIA 330
           IR+RRDV    G+CG+A+ A YP+A
Sbjct: 307 IRIRRDVAWPQGMCGVAQYAFYPVA 331


>gi|356517350|ref|XP_003527350.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
 gi|356577765|ref|XP_003556993.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 343

 Score =  335 bits (860), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 170/325 (52%), Positives = 216/325 (66%), Gaps = 12/325 (3%)

Query: 12  VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLS 71
           V SRTL + S+  +HE WMA+  + YK+  EK  RF++FK+N  +IE FN   N+ YKL 
Sbjct: 25  VASRTLQDASMYERHEQWMARYGKVYKDPEEKEKRFRVFKENVNYIEAFNNAANKPYKLG 84

Query: 72  LNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVT 131
           +N+FADLT EEFI     +     N   +S +     F Y +    LP SIDWR +GAVT
Sbjct: 85  INQFADLTSEEFIVPRNRF-----NGHTRSSNTRTTTFKYENVTV-LPDSIDWRQKGAVT 138

Query: 132 PVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAF 188
           P+KNQGSCGCCW FSA+AA EGI KI TG+L+SLSEQ+V+DC       GC GG+MD AF
Sbjct: 139 PIKNQGSCGCCWAFSAIAATEGIHKISTGKLVSLSEQEVVDCDTKGTDHGCEGGYMDGAF 198

Query: 189 SYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVS 247
            +II++ G+  E  YPY+  +G CN +  A+ AA I  Y+DVP  +E AL+ AV+ QPVS
Sbjct: 199 KFIIQNHGINTEASYPYKGVDGKCNIKEEAVHAATITGYEDVPINNEKALQKAVANQPVS 258

Query: 248 VAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGF 306
           VAIDAS   F++Y  G+F G CG  L+H VT VGYG +NEG  YWL+KNSWG  WGE G+
Sbjct: 259 VAIDASGADFQFYKSGIFTGSCGTELDHGVTAVGYGENNEGTKYWLVKNSWGTEWGEEGY 318

Query: 307 IRMRRDVGGA-GLCGIARKASYPIA 330
           I M+R V    G+CGIA  ASYP A
Sbjct: 319 IMMQRGVKAVEGICGIAMMASYPTA 343


>gi|356543116|ref|XP_003540009.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 337

 Score =  335 bits (859), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 167/334 (50%), Positives = 219/334 (65%), Gaps = 13/334 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +++++    S VMSR LHE S+S +HE WM +  + YK+ AEK  R  IFK N  FIE F
Sbjct: 13  LVLLLSICTSQVMSRYLHEASMSERHEQWMKKYGKVYKDAAEKQKRLLIFKDNVEFIESF 72

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N  GN+ YKL +N  AD T+EEF+ASH GYK           S++   F Y ++  G+P 
Sbjct: 73  NAAGNKPYKLGINHLADQTNEEFVASHNGYK--------HKASHSQTPFKY-ENVTGVPN 123

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGC 179
           ++DWR  GAVT VK+QG CG CW FS VAA EGI +I T  L+SLSEQ+++DC S   GC
Sbjct: 124 AVDWRENGAVTAVKDQGQCGSCWAFSTVAATEGIYQITTSMLMSLSEQELVDCDSVDHGC 183

Query: 180 YGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALR 238
            GG+M+  F +II++ G++ E  YPY   +G C+  + A  AA+I+ Y+ VP  SE AL+
Sbjct: 184 DGGYMEGGFEFIIKNGGISSEANYPYTAVDGTCDANKEASPAAQIKGYETVPANSEDALQ 243

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSW 297
            AV+ QPVSV IDA    F++YS GVF G CG  L+H VT VGYGS+++G  YW++KNSW
Sbjct: 244 KAVANQPVSVTIDAGGSAFQFYSSGVFTGQCGTQLDHGVTAVGYGSTDDGTQYWIVKNSW 303

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           G  WGE G+IRM+R      GLCGIA  ASYP A
Sbjct: 304 GTQWGEEGYIRMQRGTDAQEGLCGIAMDASYPTA 337


>gi|356577813|ref|XP_003557017.1| PREDICTED: uncharacterized protein LOC100801364 [Glycine max]
          Length = 890

 Score =  335 bits (858), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 168/338 (49%), Positives = 219/338 (64%), Gaps = 16/338 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           ML+ M   A  V  R+L + S+  +HE WM +  + YK+  E+  RF+IFK+N  +IE F
Sbjct: 561 MLLCMAFLAFQVTCRSLQDASMYERHEQWMTRYGKVYKDPQEREKRFRIFKENVNYIEAF 620

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYK--MPTRNISNQSQSYANNWFGYPDSRRGL 118
           N   N+ YKL++N+FADLT+EEFIA    +K  M +  I   +  Y N           +
Sbjct: 621 NNAANKRYKLAINQFADLTNEEFIAPRNRFKGHMCSSIIRTTTFKYEN--------VTAV 672

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--- 175
           P ++DWR +GAVTP+K+QG CGCCW FSAVAA EGI  + +G+LISLSEQ+++DC     
Sbjct: 673 PSTVDWRQKGAVTPIKDQGQCGCCWAFSAVAATEGIHALTSGKLISLSEQELVDCDTKGV 732

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSE 234
            +GC GG MDDAF ++I++ GL  E  YPY+  +G CN    A     I  Y+DVP  +E
Sbjct: 733 DQGCEGGLMDDAFKFVIQNHGLNTEANYPYKGVDGKCNANEAANDVVTITGYEDVPANNE 792

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLI 293
            AL+ AV+ QPVSVAIDAS   F++Y  GVF G CG  L+H VT VGYG SN+G  YWL+
Sbjct: 793 KALQKAVANQPVSVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGVSNDGTEYWLV 852

Query: 294 KNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           KNSWG  WGE G+IRM+R V    GLCGIA +ASYP A
Sbjct: 853 KNSWGTEWGEEGYIRMQRGVDSEEGLCGIAMQASYPTA 890


>gi|356545063|ref|XP_003540965.1| PREDICTED: thiol protease SEN102-like [Glycine max]
          Length = 361

 Score =  334 bits (857), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 168/338 (49%), Positives = 219/338 (64%), Gaps = 16/338 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           ML+ M   A  V  R+L + S+  +HE WM +  + YK+  E+  RF+IFK+N  +IE F
Sbjct: 32  MLLCMAFLAFQVTCRSLQDASMYERHEQWMTRYGKVYKDPQEREKRFRIFKENVNYIEAF 91

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYK--MPTRNISNQSQSYANNWFGYPDSRRGL 118
           N   N+ YKL++N+FADLT+EEFIA    +K  M +  I   +  Y N           +
Sbjct: 92  NNAANKRYKLAINQFADLTNEEFIAPRNRFKGHMCSSIIRTTTFKYEN--------VTAV 143

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--- 175
           P ++DWR +GAVTP+K+QG CGCCW FSAVAA EGI  + +G+LISLSEQ+++DC     
Sbjct: 144 PSTVDWRQKGAVTPIKDQGQCGCCWAFSAVAATEGIHALTSGKLISLSEQELVDCDTKGV 203

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSE 234
            +GC GG MDDAF ++I++ GL  E  YPY+  +G CN    A     I  Y+DVP  +E
Sbjct: 204 DQGCEGGLMDDAFKFVIQNHGLNTEANYPYKGVDGKCNANEAANDVVTITGYEDVPANNE 263

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLI 293
            AL+ AV+ QPVSVAIDAS   F++Y  GVF G CG  L+H VT VGYG SN+G  YWL+
Sbjct: 264 KALQKAVANQPVSVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGVSNDGTEYWLV 323

Query: 294 KNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           KNSWG  WGE G+IRM+R V    GLCGIA +ASYP A
Sbjct: 324 KNSWGTEWGEEGYIRMQRGVDSEEGLCGIAMQASYPTA 361


>gi|356515036|ref|XP_003526207.1| PREDICTED: thiol protease SEN102-like [Glycine max]
          Length = 336

 Score =  334 bits (857), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 160/326 (49%), Positives = 216/326 (66%), Gaps = 16/326 (4%)

Query: 10  SLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYK 69
           S VM R LHE S+  +HE WM +  + YK+ AEK  RF+IFK N  FIE FN +GN+ YK
Sbjct: 22  SQVMCRKLHETSMRERHEQWMTEYGKVYKDAAEKDKRFQIFKDNVEFIESFNADGNKPYK 81

Query: 70  LSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGA 129
           L +N  ADLT EEF AS  G+K P          ++   F Y ++   +P +IDWR +GA
Sbjct: 82  LGVNHLADLTVEEFKASRNGFKRP--------HEFSTTTFKY-ENVTAIPAAIDWRTKGA 132

Query: 130 VTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYGGWMDD 186
           VTP+K+QG CG CW FS +AA EGI +I TG+L+SLSEQ+++DC      +GC GG+M+D
Sbjct: 133 VTPIKDQGQCGSCWAFSTIAATEGIHQITTGKLVSLSEQELVDCDTKGVDQGCEGGYMED 192

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQP 245
            F +II++ G+T E  YPY+  +G CN  +     A+I+ Y+ VP  SE AL+ AV+ QP
Sbjct: 193 GFEFIIKNGGITSETNYPYKAVDGKCN--KATSPVAQIKGYEKVPPNSETALQKAVANQP 250

Query: 246 VSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGG 305
           VSV+IDA   GF +YS G++ G CG  L+H VT VGYG++N   YW++KNSWG  WGE G
Sbjct: 251 VSVSIDADGAGFMFYSSGIYNGECGTELDHGVTAVGYGTANGTDYWIVKNSWGTQWGEKG 310

Query: 306 FIRMRRDVGGA-GLCGIARKASYPIA 330
           ++RM+R +    GLCGIA  +SYP +
Sbjct: 311 YVRMQRGIAAKHGLCGIALDSSYPTS 336


>gi|224099295|ref|XP_002334495.1| predicted protein [Populus trichocarpa]
 gi|222872550|gb|EEF09681.1| predicted protein [Populus trichocarpa]
          Length = 342

 Score =  334 bits (856), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 165/338 (48%), Positives = 220/338 (65%), Gaps = 16/338 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
            ++I+  WA  V SR L E  +SA+HE WMA   + Y + AEK  RFKIFK N  +IE F
Sbjct: 13  FILILGMWAFEVASRELQESYMSARHEQWMATYGKVYVDAAEKERRFKIFKNNVEYIESF 72

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMP--TRNISNQSQSYANNWFGYPDSRRGL 118
           N  GN+ YKLS+N+FAD T+E+F  +  GY+ P  TR +   S  Y N           +
Sbjct: 73  NTAGNKPYKLSVNKFADQTNEKFKGARNGYRRPFQTRPMKVTSFKYEN--------VTAV 124

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--- 175
           P ++DWR +GAVTP+K+QG CG CW FS VAA EGI ++ TG+L+SLSEQ+++DC     
Sbjct: 125 PATMDWRKKGAVTPIKDQGQCGSCWAFSTVAATEGINQLTTGKLVSLSEQELVDCDNQGE 184

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSE 234
            +GC GG M+D F +II++ G+T E  YPYQ  +G CN ++ A   A+I  Y+ VP  SE
Sbjct: 185 DQGCEGGLMEDGFEFIIKNHGITTEANYPYQAADGTCNSKKQASHIAKITGYESVPANSE 244

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLI 293
             L   V+ QP+SV+IDA    F++YS GVF G CG  L+H VT VGYG +++G  YWL+
Sbjct: 245 AELLKVVANQPISVSIDAGGSDFQFYSSGVFTGKCGTELDHGVTAVGYGETSDGTKYWLV 304

Query: 294 KNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           KNSW  +WGE G+IRM+RD+    GLCGIA  +SYP A
Sbjct: 305 KNSWXTSWGEEGYIRMQRDIDAEEGLCGIAMDSSYPTA 342


>gi|102140014|gb|ABF70145.1| cysteine protease, putative [Musa acuminata]
          Length = 373

 Score =  333 bits (855), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 174/321 (54%), Positives = 220/321 (68%), Gaps = 14/321 (4%)

Query: 17  LHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFA 76
           L + S++ +H  WMA+  RTYK+ AEK  R  IFK N  +IE FN  G + Y+L+ N+FA
Sbjct: 26  LGDASMAERHVEWMARHGRTYKDAAEKEQRLGIFKSNVEYIESFNA-GKRKYQLAANQFA 84

Query: 77  DLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQ 136
           DLT EEF A HTG+K      S      A N F +  S   +P S+DWR++GAVTPVK+Q
Sbjct: 85  DLTHEEFKAMHTGFKP-----SGTGAKKAGNGFRH-GSLSSVPDSVDWRSKGAVTPVKDQ 138

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIR 193
           G CG CW F+ VAAVEGITKI TG+LISLSEQQ++DC      +GC GG MD AF +I+ 
Sbjct: 139 GLCGSCWAFTVVAAVEGITKIVTGKLISLSEQQLVDCDVHGKDQGCQGGDMDAAFEFIVN 198

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDA 252
           + G+T E  YPY+  +  CN    +   A I S++DVPT+ E ALR AV+ QPVSV IDA
Sbjct: 199 NGGITSEANYPYEEVQRLCNAHNASFVVATIESHEDVPTNDEKALRKAVANQPVSVGIDA 258

Query: 253 -SSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMR 310
            SS  F+ YSGGVF+G CG +L+HAVT+VGYG++++G  YWL KNSWG+ WGE G+IRM 
Sbjct: 259 GSSLDFQLYSGGVFSGECGTDLDHAVTVVGYGTTSDGTKYWLAKNSWGETWGENGYIRME 318

Query: 311 RDVGG-AGLCGIARKASYPIA 330
           RDV    GLCGIA +ASYP A
Sbjct: 319 RDVAAKEGLCGIAMQASYPTA 339


>gi|224076968|ref|XP_002305072.1| predicted protein [Populus trichocarpa]
 gi|222848036|gb|EEE85583.1| predicted protein [Populus trichocarpa]
          Length = 305

 Score =  333 bits (854), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 164/310 (52%), Positives = 213/310 (68%), Gaps = 12/310 (3%)

Query: 25  KHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFI 84
           +HE WMAQ  R Y +  EK  R+ IFK+N   IE FN   ++ YKL +N+FADLT+EEF 
Sbjct: 4   RHEEWMAQHGRVYGDMKEKEKRYLIFKENIERIEAFNNGSDRGYKLGVNKFADLTNEEFR 63

Query: 85  ASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWI 144
           A + GYK  +  + + S  Y N           +P S+DWR  GAVTPVK+QG+CGCCW 
Sbjct: 64  AMYHGYKRQSSKLMSSSFRYEN--------LSDIPTSMDWRNDGAVTPVKDQGTCGCCWA 115

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDCS-GSRGCYGGWMDDAFSYIIRSQGLTDERVY 203
           FS VAA+EGI K++TG LISLSEQQ++DC+ G++GC GG MD AF YIIR+ GLT E  Y
Sbjct: 116 FSTVAAIEGIIKLQTGNLISLSEQQLVDCTAGNKGCQGGLMDTAFQYIIRNGGLTSEDNY 175

Query: 204 PYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSG 262
           PYQ  +G C+ ++ A   A+I  Y+DVP  +E AL  AV++QPVSVA+D     FR+Y  
Sbjct: 176 PYQGVDGTCSSEKAASTEAQITGYEDVPQNNENALLQAVAKQPVSVAVDGGGNDFRFYKS 235

Query: 263 GVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCG 320
           GVF G CG NLNH VT +GYG+ ++G  YWL+KNSWG +WGE G+ RM+R +G + GLCG
Sbjct: 236 GVFEGDCGTNLNHGVTAIGYGTDSDGTDYWLVKNSWGTSWGESGYTRMQRGIGASEGLCG 295

Query: 321 IARKASYPIA 330
           +A  ASYP +
Sbjct: 296 VAMDASYPTS 305


>gi|255563136|ref|XP_002522572.1| cysteine protease, putative [Ricinus communis]
 gi|223538263|gb|EEF39872.1| cysteine protease, putative [Ricinus communis]
          Length = 340

 Score =  333 bits (853), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 188/339 (55%), Positives = 231/339 (68%), Gaps = 23/339 (6%)

Query: 1   MLIIMVTWASLVMSRTL-HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           +L+I+VTW S  M R L  ED+++ KHE WMA+  RTY++  EK  RF IFKKN + IE 
Sbjct: 12  VLMILVTWVSQAMPRPLIDEDAVAEKHEQWMARHGRTYQDDEEKERRFHIFKKNLKHIEN 71

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKM----PTRNISNQSQSYANNWFGYPDSR 115
           FN   N+TYKL LN FADLTDEEF+A++TGYKM    PT NI+ ++   ++  +      
Sbjct: 72  FNNAFNRTYKLGLNHFADLTDEEFLATYTGYKMPKVLPTANITTKTTQSSDVLY-----E 126

Query: 116 RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-S 174
             +P SIDWR RG VTPVKNQG CGCCW FSA AAVEGI     G  +SLS QQ+LDC  
Sbjct: 127 ANVPESIDWRTRGVVTPVKNQGRCGCCWAFSAAAAVEGI----IGNGVSLSAQQLLDCVP 182

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTS 233
            S GC GG+MD+AF YII++QGL     YPYQ     C   R +  AARI  Y DV P  
Sbjct: 183 DSNGCNGGFMDNAFRYIIQNQGLASATYYPYQLMREMC---RPSNNAARISGYVDVTPAD 239

Query: 234 ELALRYAVSRQPVSVAIDASSP-GFRYYSGGVFAG-PCGNNLNHAVTIVGYGSSNEGP-Y 290
           E  L+ AV+RQPVS A+DA+S   F+YY GG+F    CG+ L HA+TIVGYG+S EG  Y
Sbjct: 240 EETLKSAVARQPVSAAVDATSELNFKYYGGGIFPPQDCGSTLTHAITIVGYGTSAEGTKY 299

Query: 291 WLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           WLIKNSWG+ WGEGG++R++RDVG   G CGIA +ASYP
Sbjct: 300 WLIKNSWGEGWGEGGYMRLQRDVGSYGGACGIALRASYP 338


>gi|356515050|ref|XP_003526214.1| PREDICTED: vignain-like [Glycine max]
          Length = 344

 Score =  333 bits (853), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 166/336 (49%), Positives = 222/336 (66%), Gaps = 10/336 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           + + +    S VM R LH+ ++  +HE WMA+  + YK+ AEK  RF+IFK N  FIE F
Sbjct: 13  LFLFLAVGISQVMPRKLHQTALRERHENWMAEYGKIYKDAAEKEKRFQIFKDNVEFIESF 72

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N  GN+ YKL +N  ADLT EEF  S  G K   R     + ++  N F Y ++   +P 
Sbjct: 73  NAAGNKPYKLGVNHLADLTLEEFKDSRNGLK---RTYEFSTTTFKLNGFKY-ENVTDIPE 128

Query: 121 SIDWRARGAVTPVKNQGS-CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRG 178
           +IDWR +GAVTP+K+QG  CG CW FS VAA EGI +I TG L+SLSEQ+++DC S   G
Sbjct: 129 AIDWRVKGAVTPIKDQGDQCGSCWAFSTVAATEGIYQISTGMLMSLSEQELVDCDSVDHG 188

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELAL 237
           C GG M+D F +II++ G++ E  YPY   +G C+  + A  AA+I+ Y+ VP  SE AL
Sbjct: 189 CDGGLMEDGFEFIIKNGGISSEANYPYTAVDGTCDASKEASPAAQIKGYETVPANSEEAL 248

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG--PYWLIKN 295
           + AV+ QPVSV+IDA   GF++YS GVF G CG  L+H VT+VGYG++++G   YW++KN
Sbjct: 249 QQAVANQPVSVSIDAGGSGFQFYSSGVFTGQCGTQLDHGVTVVGYGTTDDGTHEYWIVKN 308

Query: 296 SWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           SWG  WGE G+IRM+R +    GLCGIA  ASYP A
Sbjct: 309 SWGTQWGEEGYIRMQRGIDALEGLCGIAMDASYPTA 344


>gi|255563134|ref|XP_002522571.1| cysteine protease, putative [Ricinus communis]
 gi|223538262|gb|EEF39871.1| cysteine protease, putative [Ricinus communis]
          Length = 343

 Score =  333 bits (853), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 172/334 (51%), Positives = 229/334 (68%), Gaps = 13/334 (3%)

Query: 1   MLIIMVTWASLVMSR-TLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           +L+I+ TW S  M R  L+ ++I+ KHE WMA+  RTY + AEK  RF+IFK N  +IE 
Sbjct: 14  LLMILGTWVSQAMPRPLLNAEAIAEKHEQWMARHGRTYHDNAEKERRFQIFKNNLDYIEN 73

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLP 119
           FN+  N+TYKL LN+F+DL++EEF+ ++ GY+MPT  +   + +    +F    ++  +P
Sbjct: 74  FNKAFNKTYKLGLNKFSDLSEEEFVTTYNGYEMPT-TLPTANTTVKPTFFSNYYNQDEVP 132

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            SIDWR  G VT VKNQG CGCCW FSAVAAVEGI     G   SLS QQ+LDC G   G
Sbjct: 133 ESIDWRENGVVTSVKNQGECGCCWAFSAVAAVEGI----AGNGASLSAQQLLDCVGDNSG 188

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG M  AF YI+++QG+  +  YPY++ +  C  + G+  AARI  Y+ V  SE AL+
Sbjct: 189 CGGGTMIKAFEYIVQNQGIVSDTDYPYEQTQEMC--RSGSNVAARITGYESVIQSEEALK 246

Query: 239 YAVSRQPVSVAIDASS-PGFRYYSGGVF-AGPCGNNLNHAVTIVGYGSSNEGP-YWLIKN 295
            AV++QP+SVAIDASS P F+ Y  GVF A  CG +L HAVT+VGYG++ +G  YWL+KN
Sbjct: 247 RAVAKQPISVAIDASSGPNFKSYISGVFSAEDCGTHLTHAVTLVGYGTTEDGTKYWLVKN 306

Query: 296 SWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           SWG+ WGE G++R++RDVG   G CGIA +ASYP
Sbjct: 307 SWGEEWGESGYMRLQRDVGAMEGPCGIAMQASYP 340


>gi|255580657|ref|XP_002531151.1| cysteine protease, putative [Ricinus communis]
 gi|223529264|gb|EEF31236.1| cysteine protease, putative [Ricinus communis]
          Length = 340

 Score =  332 bits (852), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 167/335 (49%), Positives = 226/335 (67%), Gaps = 13/335 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           ++ ++    S  M+RTL + S+  KHE WM++  R Y +  EK +R+KIFK+N + IE F
Sbjct: 14  LIFLLGALVSQAMARTLQDASMHEKHEEWMSRFGRVYNDGNEKEIRYKIFKENVQRIESF 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+   ++YKL +N+FADLT+EEF  S   +K      S+Q+       F Y ++    P 
Sbjct: 74  NKASGKSYKLGINQFADLTNEEFKTSRNRFK--GHMCSSQAGP-----FRY-ENLTAAPS 125

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SR 177
           S+DWR +GAVT +K+QG CG CW FSAVAAVEGIT++ T +LISLSEQ+++DC      +
Sbjct: 126 SMDWRKKGAVTAIKDQGQCGSCWAFSAVAAVEGITQLATSKLISLSEQELVDCDTKGEDQ 185

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELA 236
           GC GG MDDAF +I ++QGLT E  YPY+  +G CN ++ A  AA+I  ++DVP  +E A
Sbjct: 186 GCQGGLMDDAFKFIEQNQGLTTEANYPYEGSDGTCNTKQEANHAAKINGFEDVPANNEGA 245

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNS 296
           L  AV++QPVSVAIDA   GF++YS G+F G CG  L+H V  VGYG SN   YWL+KNS
Sbjct: 246 LMKAVAKQPVSVAIDAGGFGFQFYSSGIFTGDCGTELDHGVAAVGYGESNGMNYWLVKNS 305

Query: 297 WGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           WG  WGE G+IRM++D+    GLCGIA +ASYP A
Sbjct: 306 WGTQWGEEGYIRMQKDIDAKEGLCGIAMQASYPTA 340


>gi|110737404|dbj|BAF00646.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 345

 Score =  332 bits (850), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 180/348 (51%), Positives = 235/348 (67%), Gaps = 30/348 (8%)

Query: 1   MLIIMVTW--ASLVMSRTL--HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRF 56
           +LII+ T    S   SRT+   E S+  KHE WMA+ +R Y+++ EK MR  +FKKN +F
Sbjct: 10  VLIILFTGFRISQATSRTVIFREQSMVDKHEQWMARFSREYRDELEKNMRRDVFKKNLKF 69

Query: 57  IEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPT---------RNISNQSQSYANN 107
           IE FN++GN++YKL +NEFAD T+EEF+A HTG K  T         + IS+Q+ + ++ 
Sbjct: 70  IENFNKKGNKSYKLGVNEFADWTNEEFLAIHTGLKGLTEVSPSKVVAKTISSQTWNVSDM 129

Query: 108 WFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSE 167
                     +  S DWRA GAVTPVK QG CGCCW FSAVAAVEG+ KI  G L+SLSE
Sbjct: 130 ----------VVESKDWRAEGAVTPVKYQGQCGCCWAFSAVAAVEGVAKIAGGNLVSLSE 179

Query: 168 QQVLDCSG--SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIR 225
           QQ+LDC     R C GG M DAF+Y+++++G+  E  Y YQ  +G C  +  A  AARI 
Sbjct: 180 QQLLDCDREYDRDCDGGIMSDAFNYVVQNRGIASENDYSYQGSDGGC--RSNARPAARIS 237

Query: 226 SYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGS 284
            +Q VP+ +E AL  AVSRQPVSV++DA+  GF +YSGGV+ GPCG + NHAVT VGYG+
Sbjct: 238 GFQTVPSNNERALLEAVSRQPVSVSMDATGDGFMHYSGGVYDGPCGTSSNHAVTFVGYGT 297

Query: 285 SNEG-PYWLIKNSWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPIA 330
           S +G  YWL KNSWG+ W E G+IR+RRDV    G+CG+A+ A YP+A
Sbjct: 298 SQDGTKYWLAKNSWGETWEEKGYIRIRRDVAWPQGMCGVAQYAFYPVA 345


>gi|224121800|ref|XP_002330656.1| predicted protein [Populus trichocarpa]
 gi|222872260|gb|EEF09391.1| predicted protein [Populus trichocarpa]
          Length = 342

 Score =  332 bits (850), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 165/338 (48%), Positives = 220/338 (65%), Gaps = 16/338 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
            ++I+  WA  V SR L E  +SA+HE WMA   + Y + AEK  RFKIFK N  +IE F
Sbjct: 13  FILILGMWAFEVASRELQESYMSARHEQWMATYGKVYVDAAEKERRFKIFKNNVEYIESF 72

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMP--TRNISNQSQSYANNWFGYPDSRRGL 118
           N  GN+ YKLS+N+FAD T+E+F  +  GY+ P  TR +   S  Y N           +
Sbjct: 73  NTAGNKPYKLSVNKFADQTNEKFKGARNGYRRPFQTRPMKVTSFKYEN--------VTAV 124

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---G 175
           P ++DWR +GAVT +K+QG CG CW FS VAA EGI ++ TG+L+SLSEQ+++DC     
Sbjct: 125 PATMDWRKKGAVTLIKDQGQCGSCWAFSTVAATEGINQLTTGKLVSLSEQELVDCDIQGE 184

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSE 234
            +GC GG M+D F +II++ G+T E  YPYQ  +G CN ++ A   A+I  Y+ VP  SE
Sbjct: 185 DQGCEGGLMEDGFEFIIKNHGITTEANYPYQAADGTCNSKKQASHIAKITGYESVPANSE 244

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLI 293
             L   V+ QP+SV+IDA    F++YS GVF G CG  L+H VT VGYG +++G  YWL+
Sbjct: 245 AELLKVVANQPISVSIDAGGSDFQFYSSGVFTGKCGTELDHGVTAVGYGETSDGTKYWLV 304

Query: 294 KNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           KNSWG +WGE G+IRM+RD+    GLCGIA  +SYP A
Sbjct: 305 KNSWGTSWGEEGYIRMQRDIDTEEGLCGIAMDSSYPTA 342


>gi|357160599|ref|XP_003578815.1| PREDICTED: vignain-like [Brachypodium distachyon]
          Length = 339

 Score =  332 bits (850), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 167/338 (49%), Positives = 230/338 (68%), Gaps = 17/338 (5%)

Query: 1   MLIIMVTWASLVMSRTLHED-SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           +L  +   +S++ +R L++D S++A+HE WMAQ  R YK+ AEKA +F++FK N RFI+ 
Sbjct: 11  ILGCLCFCSSVLAARELNDDLSMAARHETWMAQYGRVYKDAAEKAQKFEVFKANARFIDS 70

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSR-RGL 118
           FN E N  + L +N+FADLT+EEF A+ T        ISN+++   +  F Y + +   L
Sbjct: 71  FNAE-NHKFWLGINQFADLTNEEFKATKTNKGF----ISNKAR--VSTGFKYENLKIEAL 123

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---G 175
           P SIDWR +GAVTPVK+QG CGCCW FSAVAA EGI K+ TG+L+SLSEQ+++DC     
Sbjct: 124 PTSIDWRTKGAVTPVKDQGQCGCCWAFSAVAATEGIVKLSTGKLVSLSEQELVDCDVHGE 183

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SE 234
            +GC GG MDDAF +II + GLT E  YPY   +G C  + G+  A  I+SY+DVP  +E
Sbjct: 184 DQGCEGGLMDDAFKFIITNGGLTQESSYPYDAEDGKC--KSGSKSAGTIKSYEDVPANNE 241

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLI 293
            AL  AV+ QPVSVA+D     F++YSGGV  G CG +L+H +  +GYG +++G  +WL+
Sbjct: 242 GALMKAVANQPVSVAVDGGDMTFQFYSGGVMTGSCGTDLDHGIAAIGYGVTSDGTKFWLM 301

Query: 294 KNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           KNSWG  WGE GF+RM +D+    G+CG+A + SYP A
Sbjct: 302 KNSWGTTWGENGFLRMEKDIADKKGMCGLAMEPSYPTA 339


>gi|356515086|ref|XP_003526232.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  331 bits (848), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 169/338 (50%), Positives = 221/338 (65%), Gaps = 16/338 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           ML+ M   A  V  RTL + S+  +HE WM +  + YK+  E+  RF++FK+N  +IE F
Sbjct: 14  MLLCMTFLAFQVTCRTLQDASMYERHEQWMTRYGKVYKDPQEREKRFRVFKENVNYIEAF 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYK--MPTRNISNQSQSYANNWFGYPDSRRGL 118
           N   N++YKL +N+FADLT++EFIA   G+K  M +  I   +  + N            
Sbjct: 74  NNAANKSYKLGINQFADLTNKEFIAPRNGFKGHMCSSIIRTTTFKFEN--------VTAT 125

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--- 175
           P ++DWR +GAVTP+K+QG CGCCW FSAVAA EGI  +  G+LISLSEQ+++DC     
Sbjct: 126 PSTVDWRQKGAVTPIKDQGQCGCCWAFSAVAATEGIHALSAGKLISLSEQELVDCDTKGV 185

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSE 234
            +GC GG MDDAF +II++ GL  E  YPY+  +G CN    A  AA I  Y+DVP  +E
Sbjct: 186 DQGCEGGLMDDAFKFIIQNHGLNTEANYPYKGVDGKCNANEAAKNAATITGYEDVPANNE 245

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLI 293
           +AL+ AV+ QPVSVAIDAS   F++Y  GVF G CG  L+H VT VGYG S++G  YWL+
Sbjct: 246 MALQKAVANQPVSVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGVSDDGTEYWLV 305

Query: 294 KNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           KNSWG  WGE G+IRM+R V    GLCGIA +ASYP A
Sbjct: 306 KNSWGTEWGEEGYIRMQRGVDSEEGLCGIAMQASYPTA 343


>gi|47524507|gb|AAT34987.1| putative cysteine protease [Gossypium hirsutum]
          Length = 344

 Score =  330 bits (847), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 171/326 (52%), Positives = 218/326 (66%), Gaps = 14/326 (4%)

Query: 13  MSRTLHEDSISAKHELWMAQSARTYKNQAE--KAMRFKIFKKNFRFIEKFNREGNQTYKL 70
           +SR L  D  S +HE WM+Q  R Y ++ E  K  RF +FK+N   IE+FN    +T+KL
Sbjct: 25  LSRPLL-DEDSMRHEEWMSQHGRVYADEQEDHKNKRFNVFKENVERIEEFND--GKTFKL 81

Query: 71  SLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAV 130
           ++N+FADLT+EEF AS+ G+K P   +   SQ      F Y +    LP S+DWR +GAV
Sbjct: 82  AINQFADLTNEEFRASYNGFKGP---MVLSSQITKPTPFRYENVSSALPVSVDWRKKGAV 138

Query: 131 TPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYGGWMDDA 187
           TPVKNQG CGCCW FSAVAA+EGIT+I TG+LISLSEQ+++DC       GC GG MD A
Sbjct: 139 TPVKNQGQCGCCWAFSAVAAIEGITQISTGKLISLSEQELVDCDTKGIDHGCEGGLMDTA 198

Query: 188 FSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPV 246
           F +II + GLT E  YPY+  +G CN+ +    A  I  Y+DVP + E AL  AV+ QPV
Sbjct: 199 FEFIINNGGLTTESNYPYKGEDGTCNFNKTNPIAVSITGYEDVPANDEQALMKAVAHQPV 258

Query: 247 SVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGG 305
           SVAI+A    F++YS GVF G CG  L+HAVT VGYG S +G  YW++KNSWG  WGE G
Sbjct: 259 SVAIEAGGSDFQFYSSGVFTGECGTELDHAVTAVGYGESEDGSKYWIVKNSWGTKWGESG 318

Query: 306 FIRMRRDVG-GAGLCGIARKASYPIA 330
           +I M++D+    GLCGIA +ASYP A
Sbjct: 319 YIEMQKDIKVKQGLCGIAMQASYPTA 344


>gi|255580659|ref|XP_002531152.1| cysteine protease, putative [Ricinus communis]
 gi|223529265|gb|EEF31237.1| cysteine protease, putative [Ricinus communis]
          Length = 340

 Score =  330 bits (845), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 167/335 (49%), Positives = 224/335 (66%), Gaps = 13/335 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           ++  +   AS  ++RTL + SI  KHE WM +  R Y +  EK +R+KIFK+N + IE F
Sbjct: 14  LIFFLGALASQAIARTLQDASIHEKHEEWMTRFKRVYSDAKEKEIRYKIFKENVQRIESF 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+   ++YKL +N+FADLT+EEF  S   +K      S+Q+       F Y ++   +P 
Sbjct: 74  NKASEKSYKLGINQFADLTNEEFKTSRNRFK--GHMCSSQAGP-----FRY-ENITAVPS 125

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SR 177
           S+DWR  GAVT +K+QG CG CW FSAVAAVEGIT++ T +LISLSEQ+++DC      +
Sbjct: 126 SMDWRKEGAVTAIKDQGQCGSCWAFSAVAAVEGITQLATSKLISLSEQELVDCDTKGEDQ 185

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELA 236
           GC GG MDDAF +I ++QGLT E  YPY+  +G CN ++ A  AA+I  ++DVP + E A
Sbjct: 186 GCQGGLMDDAFKFIEQNQGLTTEANYPYEGSDGTCNTKQEANHAAKINGFEDVPANNEGA 245

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNS 296
           L  AV++QPVSVAIDA    F++YS G+F G CG  L+H V  VGYG SN   YWL+KNS
Sbjct: 246 LMKAVAKQPVSVAIDAGGFEFQFYSSGIFTGDCGTELDHGVAAVGYGESNGMNYWLVKNS 305

Query: 297 WGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           WG  WGE G+IRM++D+    GLCGIA +ASYP A
Sbjct: 306 WGTQWGEEGYIRMQKDIDAKEGLCGIAMQASYPTA 340


>gi|413944253|gb|AFW76902.1| hypothetical protein ZEAMMB73_056195 [Zea mays]
          Length = 340

 Score =  329 bits (844), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 165/326 (50%), Positives = 223/326 (68%), Gaps = 18/326 (5%)

Query: 12  VMSRTLHEDS-ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKL 70
           + +R L+EDS + A+HE WMAQ +R YK+ AEKA RF++FK N +FIE FN  GN+ + L
Sbjct: 22  LAARDLNEDSAMVARHEQWMAQYSRVYKDAAEKARRFEVFKANVKFIESFNTGGNRKFWL 81

Query: 71  SLNEFADLTDEEFIASHT--GYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARG 128
            +N+FADLT++EF  + T  G+K P+ +  +    Y N       S   +P +IDWR  G
Sbjct: 82  GINQFADLTNDEFRTTKTNKGFK-PSLDKVSTGFRYENV------SVDAIPATIDWRTNG 134

Query: 129 AVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMD 185
           AVTP+K+QG CGCCW FSAVAA EGI KI TG+LISLSEQ+++DC      +GC GG MD
Sbjct: 135 AVTPIKDQGQCGCCWAFSAVAATEGIVKISTGKLISLSEQELVDCDVHGEDQGCEGGLMD 194

Query: 186 DAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQ 244
           DAF +II++ GLT E  YPY   +G C  + G+  AA I+ Y+DVPT+ E AL  AV+ Q
Sbjct: 195 DAFKFIIKNGGLTTESNYPYTAADGKC--KSGSNSAANIKGYEDVPTNDEAALMKAVANQ 252

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGE 303
           PVSVA+D     F++YSGGV  G CG +L+H +  +GYG +++G  YWL+KNSWG  WGE
Sbjct: 253 PVSVAVDGGDMTFQFYSGGVMTGSCGTDLDHGIAAIGYGKTSDGTKYWLMKNSWGTTWGE 312

Query: 304 GGFIRMRRDVGG-AGLCGIARKASYP 328
            G++RM +D+    G+CG+A + SYP
Sbjct: 313 NGYLRMEKDISDKKGMCGLAMEPSYP 338


>gi|319826926|gb|ADV74756.1| cysteine protease [Lactuca sativa]
          Length = 363

 Score =  329 bits (843), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 161/326 (49%), Positives = 222/326 (68%), Gaps = 11/326 (3%)

Query: 10  SLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYK 69
           S   SRTL++ ++ A+HE WMA   R Y ++ EK +RF+IFK N  +I+  N   +Q+Y 
Sbjct: 39  SRATSRTLNDPTMIARHEQWMAHHGRIYTDENEKQLRFQIFKNNVAYIDAHNARSDQSYT 98

Query: 70  LSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGA 129
           L +N+FADLT++EF AS  GYK    + S+      +  F Y +    +P  +DWR  GA
Sbjct: 99  LEVNKFADLTNDEFRASRNGYKKQPDSDSH----VVSGLFRYANV-SAVPDEVDWRKEGA 153

Query: 130 VTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDD 186
           VTPVK+QG CGCCW FSAVAA+EGI K+  G+L+SLSEQ+++DC      +GC GG M++
Sbjct: 154 VTPVKDQGDCGCCWAFSAVAAMEGINKLENGKLVSLSEQELVDCDIDGIDQGCEGGLMEN 213

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQP 245
           AF +I + +GL  E VYPY   +G CN ++ A+ AA+I  ++ VP  +E AL  AV+ QP
Sbjct: 214 AFQFIEKRKGLAAESVYPYTGEDGICNTKKAAIPAAKISGHEKVPANNEKALLQAVANQP 273

Query: 246 VSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEG 304
           VS+AIDAS   F++YSGGVF G CG  L+HA+T VGYG++ +G  YWL+KNSWG +WGE 
Sbjct: 274 VSIAIDASGYEFQFYSGGVFTGSCGTELDHAITAVGYGATMDGTKYWLMKNSWGASWGEN 333

Query: 305 GFIRMRRD-VGGAGLCGIARKASYPI 329
           G+IR++RD +   GLCGIA   SYP+
Sbjct: 334 GYIRIKRDSLAKEGLCGIAMDPSYPV 359


>gi|356542633|ref|XP_003539771.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
          Length = 341

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 168/336 (50%), Positives = 224/336 (66%), Gaps = 13/336 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           + +I    A    +RTL +  +  +HE WMA   + YK+  EK  +++IF +N + IE F
Sbjct: 13  LFLIFAFCAFEANARTLEDAPMRERHEQWMATHGKVYKHSYEKEQKYQIFMENVQRIEAF 72

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N  G + YKL +N FADLT+EEF A +   +      S ++++     F Y ++   +P 
Sbjct: 73  NNAGXKPYKLGINHFADLTNEEFKAIN---RFKGHVCSKRTRTTT---FRY-ENVTAVPA 125

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SR 177
           S+DWR +GAVTP+K+QG CGCCW FSAVAA EGITK+RTG+LISLSEQ+++DC      +
Sbjct: 126 SLDWRQKGAVTPIKDQGQCGCCWAFSAVAATEGITKLRTGKLISLSEQELVDCDTKGVDQ 185

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GG MDDAF +I++++GL  E +YPY+  +G CN +     A  I+ Y+DVP  SE A
Sbjct: 186 GCEGGLMDDAFKFILQNKGLATEAIYPYEGFDGTCNAKADGNHAGSIKGYEDVPANSESA 245

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKN 295
           L  AV+ QPVSVAI+AS   F++YSGGVF G CG NL+H VT VGYG  ++G  YWL+KN
Sbjct: 246 LLKAVANQPVSVAIEASGFKFQFYSGGVFTGSCGTNLDHGVTSVGYGVGDDGTKYWLVKN 305

Query: 296 SWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           SWG  WGE G+IRM+RDV    GLCGIA  ASYP A
Sbjct: 306 SWGVKWGEKGYIRMQRDVAAKEGLCGIAMLASYPSA 341


>gi|255568299|ref|XP_002525124.1| cysteine protease, putative [Ricinus communis]
 gi|223535583|gb|EEF37251.1| cysteine protease, putative [Ricinus communis]
          Length = 342

 Score =  328 bits (842), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 165/336 (49%), Positives = 219/336 (65%), Gaps = 13/336 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  WA    +R LHE ++  +HE WMA+  + YK+  EK  RF+IFK N  FIE  
Sbjct: 14  LFFVLAMWADQASTRELHESTMVERHEKWMAKHGKVYKDDEEKLRRFQIFKNNVEFIESS 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N  GN +Y L +N FADLT+EEF AS  GYK P         S     F Y ++   LP 
Sbjct: 74  NAAGNNSYMLGINRFADLTNEEFRASWNGYKRPL------DASRIVTPFKY-ENVTALPY 126

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSR 177
           S+DWR +GAVT +K+Q  CG CW FSAVAA EG+ K+RTG+L+SLSEQ+++DC      +
Sbjct: 127 SMDWRRKGAVTSIKDQRECGSCWAFSAVAATEGVHKLRTGKLVSLSEQELVDCDVKGEDK 186

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELA 236
           GC GG M+DAF +I R+ G+T E  Y Y+ R+G C+ ++ A   A+I  YQ VP  SE A
Sbjct: 187 GCQGGLMEDAFKFIKRNGGITTEANYAYRGRDGKCDTKKEASHVAKITGYQVVPENSEAA 246

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKN 295
           L  AV+ QPVSV+IDA S  F++Y  G++AG CG++LNH V  VGYG+S+ G  YW++KN
Sbjct: 247 LLKAVAHQPVSVSIDAGSMSFQFYQSGIYAGSCGSDLNHGVAAVGYGTSSSGSKYWIVKN 306

Query: 296 SWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           SWG  WGE G++RM+RD+    GLCGIA   SYP A
Sbjct: 307 SWGPEWGERGYVRMKRDITSRKGLCGIAMDCSYPTA 342


>gi|356543038|ref|XP_003539970.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  328 bits (841), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 172/336 (51%), Positives = 222/336 (66%), Gaps = 12/336 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L  +  WA  V SRTL + S+  +HE WMA+ A+ YK+  E+  RFKIFK+N  +IE F
Sbjct: 14  LLFCLGFWAFQVTSRTLQDASMYERHEEWMARYAKVYKDPEEREKRFKIFKENVNYIEAF 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N   N+ YKL +N+FADLT+EEFIA    +K    +   ++ +     F Y ++   LP 
Sbjct: 74  NNAANKPYKLGINQFADLTNEEFIAPRNRFKGHMCSSITRTTT-----FKY-ENVTALPS 127

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SR 177
           ++DWR +GAVTP+K+QG CGCCW FSAVAA EGI  + +G+LISLSEQ+V+DC      +
Sbjct: 128 TVDWRQKGAVTPIKDQGQCGCCWAFSAVAATEGIHALNSGKLISLSEQEVVDCDTKGEDQ 187

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GG+MD AF +II++ GL  E  YPY+  +G CN    A  AA I  Y+DVP  +E A
Sbjct: 188 GCAGGFMDGAFKFIIQNHGLNTEANYPYKAVDGKCNANEAANHAATITGYEDVPVNNEKA 247

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKN 295
           L+ AV+ QPVSVAIDAS   F++Y  GVF G CG  L+H VT VGYG S +G  YWL+KN
Sbjct: 248 LQKAVANQPVSVAIDASGSDFQFYKTGVFTGSCGTQLDHGVTAVGYGVSADGTQYWLVKN 307

Query: 296 SWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           SWG  WGE G+I M+R V    GLCGIA  ASYP A
Sbjct: 308 SWGTEWGEEGYIMMQRGVKAQEGLCGIAMMASYPTA 343


>gi|357474725|ref|XP_003607647.1| Cysteine proteinase [Medicago truncatula]
 gi|355508702|gb|AES89844.1| Cysteine proteinase [Medicago truncatula]
          Length = 340

 Score =  328 bits (840), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 162/325 (49%), Positives = 211/325 (64%), Gaps = 15/325 (4%)

Query: 12  VMSRTLHED-SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKL 70
           VMSR L+E  S+  +HE WM++  + YK+  EK  RF IFK N  FIE FN   N+ YKL
Sbjct: 25  VMSRKLYESPSLQERHEQWMSEYGKLYKDAIEKEKRFMIFKDNVEFIESFNAADNKPYKL 84

Query: 71  SLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAV 130
           S+N  ADLT +EF AS  GYK   R  +  S  Y N           +P ++DWR +GAV
Sbjct: 85  SVNHLADLTLDEFKASRNGYKKIDREFATTSFKYEN--------VTAIPEAVDWRVKGAV 136

Query: 131 TPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYGGWMDDA 187
           TP+K+QG CG CW FS VAA+EGI +I TG+LISLSEQ+++DC      +GC GG M+D 
Sbjct: 137 TPIKDQGQCGSCWAFSTVAAIEGINQITTGKLISLSEQELVDCDTKGEDQGCEGGLMEDG 196

Query: 188 FSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPV 246
           F +II++ G+T E  YPY+  +G CN    A   A+I  Y+ VP  SE++L  AV+ QP+
Sbjct: 197 FEFIIKNGGITSETNYPYKAADGSCNTATTA-PVAKITGYEKVPVNSEISLLKAVANQPI 255

Query: 247 SVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGF 306
           SV+IDAS   F +YS G++ G CG  L+H VT VGYGS+N   YW++KNSWG  WGE G+
Sbjct: 256 SVSIDASDSSFMFYSSGIYTGECGTELDHGVTAVGYGSANGTDYWIVKNSWGTVWGEKGY 315

Query: 307 IRMRRDVGG-AGLCGIARKASYPIA 330
           IRM+R +    GLCGIA  +SYP A
Sbjct: 316 IRMQRGIADKEGLCGIAMDSSYPTA 340


>gi|318136892|gb|ADV41672.1| cysteine protease [Nicotiana tabacum]
          Length = 349

 Score =  328 bits (840), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 167/338 (49%), Positives = 227/338 (67%), Gaps = 11/338 (3%)

Query: 1   MLIIMVTWASLVMS-RTL-HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIE 58
             I +  W S V S R + +E S+ A+H+ W+A   + YK+  EK MRFKIFK+N   IE
Sbjct: 15  FFIFLGVWRSQVASSRPINYEASMRARHDQWIAHHDKVYKDLNEKEMRFKIFKENVERIE 74

Query: 59  KFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL 118
            FN   ++ YKL +N+F+DLT+E+F   HTGYK     +   S S     F Y +    +
Sbjct: 75  AFNAGEDKGYKLGVNKFSDLTNEKFRVLHTGYKRSHPKV--MSSSKPKTHFRYANVT-DI 131

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---G 175
           P ++DWR +GAVTP+K+Q  CGCCW FSAVAA EG+ +++TG+LI LSEQ+++DC     
Sbjct: 132 PPTMDWRKKGAVTPIKDQKECGCCWAFSAVAATEGLHQLKTGKLIPLSEQELVDCDVEGE 191

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSE 234
             GC GG +D AF +I++++GLT E  YPY+  +G CN ++ A+ AA+I  Y+DVP  SE
Sbjct: 192 DEGCSGGLLDTAFDFILKNKGLTTEANYPYKGEDGVCNKKKSALSAAKIAGYEDVPANSE 251

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLI 293
            AL  AV+ QPVSVAID SS  F++YS GVF+G C   LNHAVT VGYG++ +G  YW+I
Sbjct: 252 KALLQAVANQPVSVAIDGSSFDFQFYSSGVFSGSCSTWLNHAVTAVGYGATTDGTKYWII 311

Query: 294 KNSWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPIA 330
           KNSWG  WG+ G++R++RDV    GLCG+A  ASYP A
Sbjct: 312 KNSWGSKWGDSGYMRIKRDVHEKEGLCGLAMDASYPTA 349


>gi|356543076|ref|XP_003539989.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  327 bits (839), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 172/338 (50%), Positives = 219/338 (64%), Gaps = 16/338 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L  +  WA  V SRTL + S+  +HE WMA+ A+ YK+  E+  RFKIFK+N  +IE F
Sbjct: 14  LLFCLGFWAFQVTSRTLQDASMYERHEEWMARYAKVYKDPEEREKRFKIFKENVNYIEAF 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYK--MPTRNISNQSQSYANNWFGYPDSRRGL 118
           N   ++ YKL +N+FADLT+EEFIA    +K  M +      +  Y N           L
Sbjct: 74  NNAADKPYKLGINQFADLTNEEFIAPRNKFKGHMCSSITRTTTFKYEN--------VTAL 125

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--- 175
           P ++DWR +GAVTP+K+QG CGCCW FSAVAA EGI  + +G+LISLSEQ+V+DC     
Sbjct: 126 PSTVDWRQKGAVTPIKDQGQCGCCWAFSAVAATEGIHALNSGKLISLSEQEVVDCDTKGE 185

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SE 234
            +GC GG+MD AF +II++ GL  E  YPY+  +G CN    A  AA I  Y+DVP  +E
Sbjct: 186 DQGCAGGFMDGAFKFIIQNHGLNTEANYPYKAVDGKCNANEAANHAATITGYEDVPVNNE 245

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLI 293
            AL+ AV+ QPVSVAIDAS   F++Y  GVF G CG  L+H VT VGYG S +G  YWL+
Sbjct: 246 KALQKAVANQPVSVAIDASGSDFQFYKTGVFTGSCGTQLDHGVTAVGYGVSADGTQYWLV 305

Query: 294 KNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           KNSWG  WGE G+I M+R V    GLCGIA  ASYP A
Sbjct: 306 KNSWGTEWGEEGYIMMQRGVKAQEGLCGIAMMASYPTA 343


>gi|255557851|ref|XP_002519955.1| cysteine protease, putative [Ricinus communis]
 gi|223541001|gb|EEF42559.1| cysteine protease, putative [Ricinus communis]
          Length = 321

 Score =  327 bits (838), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 171/335 (51%), Positives = 224/335 (66%), Gaps = 36/335 (10%)

Query: 1   MLIIMVTWASLVMSRTL-HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           +L++  TWAS  M+R L +ED++  KHE WMA+  RTY++  EK  RF+IFK N  +I+ 
Sbjct: 13  LLVVFSTWASQAMARQLINEDALVEKHEQWMARHGRTYQDSEEKERRFQIFKSNLEYIDN 72

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLP 119
           FN+  NQTY+L LN FADL+ EE++A++T  KMP                        +P
Sbjct: 73  FNKASNQTYQLGLNNFADLSHEEYVATYTARKMPVE----------------------VP 110

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRG 178
            SIDWR  GAVTP+KNQ  CGCCW FSA AAVEGI  +  G  +SLS QQ+LDC S ++G
Sbjct: 111 ESIDWRDHGAVTPIKNQYQCGCCWAFSAAAAVEGI--VANG--VSLSAQQLLDCVSDNQG 166

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELAL 237
           C GGWM++AF+YII++QG+  E  YPYQ+ +  C+     M AA+I  ++DV P  E AL
Sbjct: 167 CKGGWMNNAFNYIIQNQGIALETDYPYQQMQQMCS---SRMAAAQISGFEDVTPKDEEAL 223

Query: 238 RYAVSRQPVSVAIDASS-PGFRYYSGGVF-AGPCGNNLNHAVTIVGYGSSNEGP-YWLIK 294
             AV++QPVSV IDA+S P F+ Y  GVF A  CGN  +HAVT+VGYG+S +G  YWL K
Sbjct: 224 MRAVAKQPVSVTIDATSNPNFKLYKEGVFTAAGCGNGHSHAVTLVGYGTSEDGTKYWLAK 283

Query: 295 NSWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYP 328
           NSWG+ WGE G++R++RD+G   G CGIA  ASYP
Sbjct: 284 NSWGETWGESGYMRLQRDIGLEGGPCGIALYASYP 318


>gi|297826061|ref|XP_002880913.1| hypothetical protein ARALYDRAFT_481640 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326752|gb|EFH57172.1| hypothetical protein ARALYDRAFT_481640 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 347

 Score =  326 bits (836), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 182/343 (53%), Positives = 227/343 (66%), Gaps = 16/343 (4%)

Query: 1   MLIIMVTW-ASLVMSRT-LHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIE 58
           +L I +++  SL  SR  L E S   KHE WMA+  R Y +++EK  RF IFKKN  F++
Sbjct: 8   ILTIFLSYRTSLATSRGGLFEASPIEKHEQWMARFNRVYSDESEKRNRFNIFKKNLEFVQ 67

Query: 59  KFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTR--NISNQSQSYANNWFGYPD-SR 115
            FN   N TYKL +NEF+DLTDEEF A+HTG  +P     IS  S S     F Y + S 
Sbjct: 68  SFNMNKNITYKLDVNEFSDLTDEEFRATHTGLVVPEEITGISTLS-SDKTVPFRYGNVSD 126

Query: 116 RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG 175
            G   S+DWR  GAVTPVK QG CG CW FSAVAAVEGITKI  G L+SLSEQQ+LDC  
Sbjct: 127 TG--ESMDWRQEGAVTPVKYQGRCGGCWAFSAVAAVEGITKITKGELVSLSEQQLLDCDT 184

Query: 176 --SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRRE---GYCNWQRGAMKAARIRSYQDV 230
             ++GC+GG M  AF YII++QG+T E  YPYQ  +           + +AA I  Y+ V
Sbjct: 185 DYNQGCHGGIMSKAFEYIIKNQGITTEDNYPYQESQQTCSSSTTLSSSFRAATISGYETV 244

Query: 231 P-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP 289
           P  +E AL  AVS+QPVSV I+ +  GFR+YSGG+F G CG +L+HAVTIVGYG S EG 
Sbjct: 245 PMNNEEALLQAVSQQPVSVGIEGTGAGFRHYSGGIFNGECGTDLHHAVTIVGYGMSEEGT 304

Query: 290 -YWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
            YW++KNSWG+ WGE GF+R++RDV    G+CG+A  A YP+A
Sbjct: 305 KYWVVKNSWGETWGEDGFMRIKRDVDAPQGMCGLAMLAFYPLA 347


>gi|356577763|ref|XP_003556992.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  326 bits (835), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 165/325 (50%), Positives = 215/325 (66%), Gaps = 12/325 (3%)

Query: 12  VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLS 71
           V  RTL + S+  +HE WM + A+ YK+  E+  RFKIFK+N  +IE FN   N+ Y L 
Sbjct: 25  VTCRTLQDASMYERHEEWMGRYAKVYKDPQERERRFKIFKENVNYIEAFNNAANKPYTLG 84

Query: 72  LNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVT 131
           +N+FADLT+EEFIA    +K    +   ++ +     F Y ++   +P ++DWR +GAVT
Sbjct: 85  INQFADLTNEEFIAPRNRFKGHMCSSITRTTT-----FKY-ENVTAIPSTVDWRQKGAVT 138

Query: 132 PVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYGGWMDDAF 188
           P+K+QG CGCCW FSAVAA EGI  +  G+LISLSEQ+V+DC      +GC GG+MD AF
Sbjct: 139 PIKDQGQCGCCWAFSAVAATEGIHALSAGKLISLSEQEVVDCDTKGEDQGCAGGFMDGAF 198

Query: 189 SYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVS 247
            +II++ GL +E  YPY+  +G CN +  A   A I  Y+DVP  +E AL+ AV+ QPVS
Sbjct: 199 KFIIQNHGLNNEPNYPYKAVDGKCNAKAAANHVATITGYEDVPVNNEKALQKAVANQPVS 258

Query: 248 VAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGF 306
           VAIDAS   F++Y  GVF G CG  L+H VT VGYG S +G  YWL+KNSWG  WGE G+
Sbjct: 259 VAIDASGSDFQFYQSGVFTGSCGTELDHGVTAVGYGVSADGTEYWLVKNSWGTEWGEEGY 318

Query: 307 IRMRRDVGG-AGLCGIARKASYPIA 330
           IRM+R V    GLCGIA  ASYP A
Sbjct: 319 IRMQRGVKAEEGLCGIAMMASYPTA 343


>gi|356517348|ref|XP_003527349.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  326 bits (835), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 165/325 (50%), Positives = 215/325 (66%), Gaps = 12/325 (3%)

Query: 12  VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLS 71
           V  RTL + S+  +HE WM + A+ YK+  E+  RFKIFK+N  +IE FN   N+ Y L 
Sbjct: 25  VTCRTLQDASMYERHEEWMGRYAKVYKDPQERERRFKIFKENVNYIEAFNNAANKPYTLG 84

Query: 72  LNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVT 131
           +N+FADLT+EEFIA    +K    +   ++ +     F Y ++   +P ++DWR +GAVT
Sbjct: 85  INQFADLTNEEFIAPRNRFKGHMCSSITRTTT-----FKY-ENVTAIPSTVDWRQKGAVT 138

Query: 132 PVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYGGWMDDAF 188
           P+K+QG CGCCW FSAVAA EGI  +  G+LISLSEQ+V+DC      +GC GG+MD AF
Sbjct: 139 PIKDQGQCGCCWAFSAVAATEGIHALSAGKLISLSEQEVVDCDTKGEDQGCAGGFMDGAF 198

Query: 189 SYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVS 247
            +II++ GL +E  YPY+  +G CN +  A   A I  Y+DVP  +E AL+ AV+ QPVS
Sbjct: 199 KFIIQNHGLNNEPNYPYKAVDGKCNAKAAANHVATITGYEDVPVNNEKALQKAVANQPVS 258

Query: 248 VAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGF 306
           VAIDAS   F++Y  GVF G CG  L+H VT VGYG S +G  YWL+KNSWG  WGE G+
Sbjct: 259 VAIDASGSDFQFYQSGVFTGSCGTELDHGVTAVGYGVSADGTEYWLVKNSWGTEWGEEGY 318

Query: 307 IRMRRDVGG-AGLCGIARKASYPIA 330
           IRM+R V    GLCGIA  ASYP A
Sbjct: 319 IRMQRGVKAEEGLCGIAMMASYPTA 343


>gi|413953668|gb|AFW86317.1| hypothetical protein ZEAMMB73_339067 [Zea mays]
          Length = 433

 Score =  326 bits (835), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 159/325 (48%), Positives = 221/325 (68%), Gaps = 16/325 (4%)

Query: 12  VMSRTLHEDSIS-AKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKL 70
           + +R L +DS+  A+HE WMAQ +R YK+ +EKA RF++FK N +FIE FN  GN  + L
Sbjct: 115 MAARDLSDDSVMVARHEQWMAQYSRVYKDASEKARRFEVFKANVQFIESFNAGGNNKFWL 174

Query: 71  SLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRARGA 129
            +N+FADLT++EF ++ T   + + N+   +       F Y + S   LP +IDWR +GA
Sbjct: 175 GVNQFADLTNDEFRSTKTNKGLKSSNMKIPTG------FRYENVSADALPTTIDWRTKGA 228

Query: 130 VTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDD 186
           VTP+K+QG CGCCW FSAVAA EGI KI TG+L+SL+EQ+++DC      +GC GG MDD
Sbjct: 229 VTPIKDQGQCGCCWAFSAVAATEGIVKISTGKLVSLAEQELVDCDVHGEDQGCEGGLMDD 288

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQP 245
           AF +II++ GLT E  YPY   +G C  + G+  AA I+ Y+DVP + E AL  AV+ QP
Sbjct: 289 AFKFIIKNGGLTTESSYPYTAADGKC--KSGSNSAATIKGYEDVPANDEAALMKAVANQP 346

Query: 246 VSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEG 304
           VSVA+D     F++YSGGV  G CG +L+H +  +GYG +++G  YWL+KNSWG  WGE 
Sbjct: 347 VSVAVDGGDMTFQFYSGGVMTGSCGTDLDHGIAAIGYGKTSDGTKYWLMKNSWGTTWGEN 406

Query: 305 GFIRMRRDVGGA-GLCGIARKASYP 328
           G++RM +D+    G+CG+A + SYP
Sbjct: 407 GYLRMEKDISDKRGMCGLAMEPSYP 431


>gi|224162986|ref|XP_002338508.1| predicted protein [Populus trichocarpa]
 gi|222872535|gb|EEF09666.1| predicted protein [Populus trichocarpa]
          Length = 306

 Score =  326 bits (835), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 160/311 (51%), Positives = 209/311 (67%), Gaps = 13/311 (4%)

Query: 25  KHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFI 84
           +HE WM Q  R YK+  E+A R+ IFK+N   I+ FN +  ++YKL +N+FADLT+EEF 
Sbjct: 4   RHEQWMTQYGRVYKDDNERATRYSIFKENVARIDAFNSQTGKSYKLGVNQFADLTNEEFK 63

Query: 85  ASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWI 144
           AS   +K    +       Y N           +P ++DWR  GAVTPVK+QG CGCCW 
Sbjct: 64  ASRNRFKGHMCSPQAGPFRYEN--------VSAVPSTVDWRKEGAVTPVKDQGQCGCCWA 115

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYGGWMDDAFSYIIRSQGLTDER 201
           FSAVAA+EGI K+ TG+LISLSEQ+V+DC      +GC GG MDDAF +I +++GLT E 
Sbjct: 116 FSAVAAMEGINKLTTGKLISLSEQEVVDCDTKGEDQGCNGGLMDDAFKFIEQNKGLTTEA 175

Query: 202 VYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYY 260
            YPY+  +G CN ++ A+ AA+I  ++DVP  SE AL  AV++QPVSVAIDA    F++Y
Sbjct: 176 NYPYKGTDGTCNTKKSAIHAAKITGFEDVPANSEAALMKAVAKQPVSVAIDAGGSDFQFY 235

Query: 261 SGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLC 319
           S G+F G C   L+H VT VGYG S+   YWL+KNSWG  WGE G+IRM++D+    GLC
Sbjct: 236 SSGIFTGSCDTQLDHGVTAVGYGVSDGSKYWLVKNSWGAQWGEEGYIRMQKDISAKEGLC 295

Query: 320 GIARKASYPIA 330
           GIA +ASYP A
Sbjct: 296 GIAMQASYPTA 306


>gi|388512155|gb|AFK44139.1| unknown [Medicago truncatula]
          Length = 340

 Score =  325 bits (834), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 161/325 (49%), Positives = 211/325 (64%), Gaps = 15/325 (4%)

Query: 12  VMSRTLHED-SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKL 70
           VMSR L+E  S+  +HE WM++  + YK+  EK  RF IFK N  FIE FN   N+ YKL
Sbjct: 25  VMSRKLYESPSLQERHEQWMSEYGKLYKDAIEKEKRFMIFKDNVEFIESFNAADNKPYKL 84

Query: 71  SLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAV 130
           S+N  ADLT +EF AS  GYK   R  +  S  Y N           +P ++DWR +GAV
Sbjct: 85  SVNHLADLTLDEFKASRNGYKKIDREFATTSFKYEN--------VTAIPEAVDWRVKGAV 136

Query: 131 TPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYGGWMDDA 187
           TP+K+QG CG CW FS VAA+EGI +I TG+LISLSEQ+++DC      +GC GG M+D 
Sbjct: 137 TPIKDQGQCGSCWAFSTVAAIEGINQITTGKLISLSEQELVDCDTKGEDQGCEGGLMEDG 196

Query: 188 FSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPV 246
           F +II++ G+T E  YPY+  +G C+    A   A+I  Y+ VP  SE++L  AV+ QP+
Sbjct: 197 FEFIIKNGGITSETNYPYKAADGSCSAATTA-PVAKITGYEKVPVNSEISLLKAVANQPI 255

Query: 247 SVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGF 306
           SV+IDAS   F +YS G++ G CG  L+H VT VGYGS+N   YW++KNSWG  WGE G+
Sbjct: 256 SVSIDASDSSFMFYSSGIYTGECGTELDHGVTAVGYGSANGTDYWIVKNSWGTVWGEKGY 315

Query: 307 IRMRRDVGG-AGLCGIARKASYPIA 330
           IRM+R +    GLCGIA  +SYP A
Sbjct: 316 IRMQRGIADKEGLCGIAMDSSYPTA 340


>gi|356515040|ref|XP_003526209.1| PREDICTED: thiol protease SEN102-like [Glycine max]
          Length = 342

 Score =  325 bits (832), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 160/334 (47%), Positives = 218/334 (65%), Gaps = 8/334 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           + + +    S VM R LH+ ++  +HE WMA+  + YK+ AEK  RF+IFK N  FIE F
Sbjct: 13  LFLFLAVGISQVMPRKLHQTALRERHENWMAEYGKMYKDAAEKEKRFQIFKDNVEFIESF 72

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N  GN+ YKL +N  ADLT EEF  S  G K   R     + ++  N F Y ++   +P 
Sbjct: 73  NAAGNKPYKLGVNHLADLTLEEFKDSRNGLK---RTYEFSTTTFKLNGFKY-ENVTDIPE 128

Query: 121 SIDWRARGAVTPVKNQGS-CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRG 178
           +IDWR +GAVTP+K+QG  CG CW FS +AA EGI +I TG L+SLSEQ+++DC S   G
Sbjct: 129 AIDWRVKGAVTPIKDQGDQCGSCWAFSTIAATEGIHQISTGNLVSLSEQELVDCDSVDDG 188

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELAL 237
           C GG+M+D F +II++ G+T E  YPY+  +G CN    A   A+I+ Y+ VP+ SE AL
Sbjct: 189 CEGGFMEDGFEFIIKNGGITSETNYPYKGVDGTCNTTIAASPVAQIKGYEIVPSYSEEAL 248

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSW 297
           + AV+ QPVSV+I A++  F +YS G++ G CG +L+H VT VGYG+ N   YW++KNSW
Sbjct: 249 QKAVANQPVSVSIHATNATFMFYSSGIYNGECGTDLDHGVTAVGYGTENGTDYWIVKNSW 308

Query: 298 GQNWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
           G  WGE G+IRM R +    G+CGIA  +SYP A
Sbjct: 309 GTQWGEKGYIRMHRGIAAKHGICGIALDSSYPTA 342


>gi|84181681|gb|AAW78661.2| senescence-specific cysteine protease [Nicotiana tabacum]
          Length = 349

 Score =  325 bits (832), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 163/338 (48%), Positives = 228/338 (67%), Gaps = 11/338 (3%)

Query: 1   MLIIMVTWASLV-MSRTL-HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIE 58
             I +  W+S V +SR + +E ++ A+H+ W+    + YK+  EK +RF+IFK+N   IE
Sbjct: 15  FFICLGLWSSQVALSRPINYEATMRARHDQWIVHHEKVYKDLNEKEVRFQIFKENVERIE 74

Query: 59  KFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL 118
            FN   ++ YKL  N+F+DLT+EEF   HTGYK     +   S+   +  F Y +    +
Sbjct: 75  AFNAGEDKGYKLGFNKFSDLTNEEFRVLHTGYKRSHPKVMTSSKGKTH--FRYTNVTD-I 131

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---G 175
           P ++DWR +GAVTP+K+Q  CGCCW FSAVAA+EG+ +++TG LI LSEQ+++DC     
Sbjct: 132 PPTMDWRKKGAVTPIKDQKECGCCWAFSAVAAMEGLHQLKTGELIPLSEQELVDCDVEGE 191

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSE 234
             GC GG +D AF +I++++GLT E  YPY+  +G CN ++ A+ AA+I  Y+DVP  SE
Sbjct: 192 DEGCSGGLLDTAFDFILKNKGLTTEVNYPYKGEDGVCNKKKSALSAAKITGYEDVPANSE 251

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLI 293
            AL  AV+ QPVSVAID SS  F++YS GVF+G C   LNHAVT VGYG++ +G  YW+I
Sbjct: 252 KALLQAVANQPVSVAIDGSSFDFQFYSSGVFSGSCSTWLNHAVTAVGYGATTDGTKYWII 311

Query: 294 KNSWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPIA 330
           KNSWG  WG+ G++R++RDV    GLCG+A  ASYP A
Sbjct: 312 KNSWGSKWGDSGYMRIKRDVHEKEGLCGLAMDASYPTA 349


>gi|224076972|ref|XP_002305074.1| predicted protein [Populus trichocarpa]
 gi|224106329|ref|XP_002333698.1| predicted protein [Populus trichocarpa]
 gi|222837984|gb|EEE76349.1| predicted protein [Populus trichocarpa]
 gi|222848038|gb|EEE85585.1| predicted protein [Populus trichocarpa]
          Length = 307

 Score =  324 bits (831), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 160/312 (51%), Positives = 213/312 (68%), Gaps = 14/312 (4%)

Query: 25  KHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFI 84
           +HE WMAQ  R Y +  EK  R+ IFK+N   IE FN   ++ YKL +N+FADLT+EEF 
Sbjct: 4   RHEEWMAQHGRVYGDMKEKEKRYLIFKENIERIEAFNNGSDRGYKLGVNKFADLTNEEFR 63

Query: 85  ASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWI 144
           A H GYK  +  + + S  + N           +P S+DWR  GAVTPVK+QG+CGCCW 
Sbjct: 64  AMHHGYKRQSSKLMSSSFRHEN--------LSAIPTSMDWRKAGAVTPVKDQGTCGCCWA 115

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDER 201
           FSAVAA+EGI K++TG+LISLSEQQ++DC      +GC GG MD+AF +I+R+ GLT E 
Sbjct: 116 FSAVAAIEGIIKLKTGKLISLSEQQLVDCDVKGVDQGCGGGLMDNAFQFILRNGGLTSEA 175

Query: 202 VYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYY 260
            YPYQ  +G C  ++ A   A+I  Y+DVP  +E AL  AV++QPVSVA++     F++Y
Sbjct: 176 TYPYQGVDGTCKSKKTASIEAKITGYEDVPVNNENALLQAVAKQPVSVAVEGGGYDFQFY 235

Query: 261 SGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRDVGG-AGL 318
             GVF G CG  L+HAVT +GYG++++G  YWL+KNSWG +WGE G++RM+R +G   GL
Sbjct: 236 KSGVFKGDCGTYLDHAVTAIGYGTNSDGTNYWLVKNSWGTSWGESGYMRMQRGIGAREGL 295

Query: 319 CGIARKASYPIA 330
           CG+A  ASYP A
Sbjct: 296 CGVAMDASYPTA 307


>gi|357458911|ref|XP_003599736.1| Cysteine proteinase [Medicago truncatula]
 gi|357474719|ref|XP_003607644.1| Cysteine proteinase [Medicago truncatula]
 gi|355488784|gb|AES69987.1| Cysteine proteinase [Medicago truncatula]
 gi|355508699|gb|AES89841.1| Cysteine proteinase [Medicago truncatula]
          Length = 340

 Score =  324 bits (831), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 160/325 (49%), Positives = 207/325 (63%), Gaps = 15/325 (4%)

Query: 12  VMSRTLHED-SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKL 70
           VMSR L+E  S+  +HE WM +  + Y++  EK  RF IFK N  FIE FN   NQ YKL
Sbjct: 25  VMSRKLYESLSLQERHEQWMTEHGKVYEDAIEKEKRFMIFKDNVEFIESFNAADNQPYKL 84

Query: 71  SLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAV 130
           S+N  ADLT +EF AS  GYK   R  +  S  Y N           +P ++DWR +GAV
Sbjct: 85  SVNHLADLTLDEFKASRNGYKKIDREFTTTSFKYEN--------VTAIPAAVDWRVKGAV 136

Query: 131 TPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYGGWMDDA 187
           TP+K+QG CG CW FS VAA EGI +I TG+L+SLSEQ+++DC      +GC GG M+D 
Sbjct: 137 TPIKDQGQCGSCWAFSTVAATEGINQITTGKLVSLSEQELVDCDTKGEDQGCEGGLMEDG 196

Query: 188 FSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPV 246
           F +II++ G+T E  YPY+  +G CN        A+I  Y+ VP  SE +L  AV+ QP+
Sbjct: 197 FEFIIKNGGITSETNYPYKAADGSCN-TATTTPVAKITGYEKVPVNSEKSLLKAVANQPI 255

Query: 247 SVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGF 306
           SV+IDAS   F +YS G++ G CG  L+H VT VGYGS+N   YW++KNSWG  WGE G+
Sbjct: 256 SVSIDASDSSFMFYSSGIYTGECGTELDHGVTAVGYGSANGTDYWIVKNSWGTVWGEKGY 315

Query: 307 IRMRRDVGG-AGLCGIARKASYPIA 330
           IRM+R +    GLCGIA  +SYP A
Sbjct: 316 IRMQRGIAAKEGLCGIAMDSSYPTA 340


>gi|357167190|ref|XP_003581045.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like
           [Brachypodium distachyon]
          Length = 415

 Score =  323 bits (829), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 167/339 (49%), Positives = 222/339 (65%), Gaps = 16/339 (4%)

Query: 1   MLIIMVTWA-SLVMSRTLHED-SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIE 58
           + I+  T A S + +R L +D S+ A+HE WMA+  R Y + AEKA R ++FK N  FIE
Sbjct: 84  IAILACTCAVSALAARDLTDDLSMVARHEQWMAKYGRVYNDVAEKAQRLEVFKANVAFIE 143

Query: 59  KFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQ-SYANNWFGYPDSRRG 117
             N  GN  + L  N+FAD+T +EF A+HTGYK    N    +Q  YAN       S   
Sbjct: 144 LVNA-GNDKFSLEANQFADMTVDEFRAAHTGYKPVPANKGRTTQFKYANV------SLDA 196

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           LP S+DWRA+GAVTP+K+QG CGCCW FS VA+VEGI K+ TG+LISLSEQ+++DC    
Sbjct: 197 LPASMDWRAKGAVTPIKDQGQCGCCWAFSTVASVEGIVKLSTGKLISLSEQELVDCDVDG 256

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS- 233
             +GC GG MD+AF +II + GLT E  YPY   +  CN  + +   A I+ Y+DVP++ 
Sbjct: 257 MDQGCEGGLMDNAFEFIIDNGGLTTEGNYPYTGTDDSCNSNKESNDVASIKGYEDVPSND 316

Query: 234 ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWL 292
           E +L  AV+ QPVS+A+D     FR+Y GGV +G CG  L+H +  VGYG +++G  +WL
Sbjct: 317 ETSLLKAVAAQPVSIAVDGGDNLFRFYKGGVLSGACGTELDHGIAAVGYGITSDGTKFWL 376

Query: 293 IKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           +KNSWG +WGE GFIRM RD+    GLCG+A + SYP A
Sbjct: 377 MKNSWGTSWGEKGFIRMERDIADEEGLCGLAMQPSYPTA 415


>gi|356539398|ref|XP_003538185.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  323 bits (828), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 164/323 (50%), Positives = 215/323 (66%), Gaps = 13/323 (4%)

Query: 14  SRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLN 73
           +RTL +  +  +HE WMA   + Y +  EK  +++ FK+N + IE FN  GN+ YKL +N
Sbjct: 28  ARTLEDAPMRERHEQWMAIHGKVYTHSYEKEQKYQTFKENVQRIEAFNHAGNKPYKLGIN 87

Query: 74  EFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPV 133
            FADLT+EEF A +         I+          F Y ++   +P ++DWR  GAVTP+
Sbjct: 88  HFADLTNEEFKAINRFKGHVCSKITRTPT------FRY-ENMTAVPATLDWRQEGAVTPI 140

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYGGWMDDAFSY 190
           K+QG CGCCW FSAVAA EGITK+ TG+LISLSEQ+++DC      +GC GG MDDAF +
Sbjct: 141 KDQGQCGCCWAFSAVAATEGITKLSTGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKF 200

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVA 249
           I++++GL  E +YPY+  +G CN +     A  I+ Y+DVP  SE AL  AV+ QPVSVA
Sbjct: 201 ILQNKGLAAEAIYPYEGVDGTCNAKAEGNHATSIKGYEDVPANSESALLKAVANQPVSVA 260

Query: 250 IDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIR 308
           I+AS   F++YSGGVF G CG NL+H VT VGYG S++G  YWL+KNSWG  WG+ G+IR
Sbjct: 261 IEASGFEFQFYSGGVFTGSCGTNLDHGVTAVGYGVSDDGTKYWLVKNSWGVKWGDKGYIR 320

Query: 309 MRRDVGG-AGLCGIARKASYPIA 330
           M+RDV    GLCGIA  ASYP A
Sbjct: 321 MQRDVAAKEGLCGIAMLASYPNA 343


>gi|357458909|ref|XP_003599735.1| Cysteine proteinase [Medicago truncatula]
 gi|357474677|ref|XP_003607623.1| Cysteine proteinase [Medicago truncatula]
 gi|355488783|gb|AES69986.1| Cysteine proteinase [Medicago truncatula]
 gi|355508678|gb|AES89820.1| Cysteine proteinase [Medicago truncatula]
          Length = 342

 Score =  323 bits (828), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 163/338 (48%), Positives = 221/338 (65%), Gaps = 14/338 (4%)

Query: 1   MLIIMVTWA-SLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           M +I  TW    VMS  + E  +S KHE WM Q  ++YK+ AEK  RF+IFK N  FIE 
Sbjct: 11  MFLIFTTWMLPYVMSSRVLEPYLSNKHEKWMTQFGKSYKDAAEKEKRFQIFKNNVEFIEL 70

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYK--MPTRNISNQSQSYANNWFGYPDSRRG 117
           FN  GN+ + LS+N FADLT+EEF AS  G K      +I N++ S+  +      +   
Sbjct: 71  FNAVGNKPFNLSINHFADLTNEEFKASLNGNKKLHDKFDILNETTSFRYH------NVTS 124

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SG 175
           +P S+DWR RGAVTP+KNQGSCG CW FS VA++EGI +I TG L+SLSEQ+++DC    
Sbjct: 125 VPASMDWRKRGAVTPIKNQGSCGSCWAFSTVASIEGIHQITTGELVSLSEQELIDCVRGN 184

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SE 234
           S GC GG+++DAF +I +  G+  E  YPY+  +  C +++ +   A I+ Y+ VP+ SE
Sbjct: 185 SSGCSGGYLEDAFKFIAKKGGMASETNYPYKETDEKCKFKKESKHVAEIKGYEKVPSNSE 244

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSS-NEGPYWLI 293
             L  AV+ QPVSV +DA    F++YSGG+F G CG + +H VTIVGYG S +   YWL+
Sbjct: 245 NDLLKAVANQPVSVYVDAGDYVFQFYSGGIFTGKCGTDTDHVVTIVGYGVSLDYTEYWLV 304

Query: 294 KNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           KNSWG  WGE G+++++R+V    GLCGIA   SYP+A
Sbjct: 305 KNSWGTGWGEKGYMKLKRNVDSKKGLCGIATNPSYPVA 342


>gi|357160569|ref|XP_003578807.1| PREDICTED: vignain-like [Brachypodium distachyon]
          Length = 339

 Score =  323 bits (827), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 166/338 (49%), Positives = 227/338 (67%), Gaps = 17/338 (5%)

Query: 1   MLIIMVTWASLVMSRTLHED-SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           +L  +   +S++ +R L++D S+ A+HE WM Q  R YK+ AEKA +F++FK N  FI+ 
Sbjct: 11  ILGCLCFCSSVLAARELNDDLSMVARHESWMLQYGRVYKDAAEKASKFEVFKANAGFIDS 70

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGL 118
           FN  GN  + L +N+FAD+T++EF A+ T        ISN+ +  A   F Y + S   L
Sbjct: 71  FNA-GNHKFWLGINQFADITNKEFKATKTNKGF----ISNKVR--APTGFSYENVSFDAL 123

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---G 175
           P SIDWR +GAVTPVK+QG CGCCW FSAVAA EGI K+ TG+L+SLSEQ+++DC     
Sbjct: 124 PASIDWRTKGAVTPVKDQGQCGCCWAFSAVAATEGIVKLSTGKLVSLSEQELVDCDVHGE 183

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SE 234
            +GC GG MDDAF +II + GLT E  YPY   +G C  + G+  A  I+SY+DVP  +E
Sbjct: 184 DQGCEGGLMDDAFKFIISNGGLTQESSYPYDAEDGKC--KSGSKSAGTIKSYEDVPANNE 241

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLI 293
            AL  AV+ QPVSVA+D     F++YSGGV  G CG +L+H +  +GYG +++G  YWL+
Sbjct: 242 GALMKAVANQPVSVAVDGGDMTFQFYSGGVMTGSCGTDLDHGIAAIGYGVTSDGTKYWLM 301

Query: 294 KNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           KNSWG +WGE GF+RM +D+    G+CG+A + SYP A
Sbjct: 302 KNSWGTSWGENGFLRMEKDIADKKGMCGLAMEPSYPTA 339


>gi|144905112|dbj|BAF56429.1| cysteine proteinase [Lotus japonicus]
          Length = 341

 Score =  322 bits (826), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 165/338 (48%), Positives = 214/338 (63%), Gaps = 18/338 (5%)

Query: 1   MLIIMVTWASLVMSRTLHED--SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIE 58
           + +++    S V+SR LHE   S+  +HE WMA+  + YK+ AEK  RF IFK N  FIE
Sbjct: 14  LFLLLAVGISRVISRELHETETSLIERHEQWMAKYDKVYKDAAEKEKRFLIFKDNVEFIE 73

Query: 59  KFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMP-TRNISNQSQSYANNWFGYPDSRRG 117
            FN  GN+ YKL +N  ADLT EEF AS  G K      +   S  Y N           
Sbjct: 74  SFNAAGNKPYKLGVNHLADLTIEEFKASRNGLKRSYDYEVGTTSFKYEN--------VTA 125

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           +P S+DWR +GAVTP+K+QG CG CW FS VAA EGI KI TG+L+SLSEQ+++DC    
Sbjct: 126 IPASVDWRKKGAVTPIKDQGQCGSCWAFSTVAATEGIHKISTGKLVSLSEQELVDCDRKG 185

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-S 233
             +GC GG+M+D F +II++ G+T E  YPY+  +G C  +     AA+I+ Y+ VP  S
Sbjct: 186 TDQGCEGGYMEDGFEFIIKNGGITTEANYPYKAVDGSC--KNATAPAAQIKGYEKVPVNS 243

Query: 234 ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLI 293
           E AL  AV+ QPVSV+IDA+   F +YS G+F G CG  L+H VT VGYG +N   YW++
Sbjct: 244 EKALLKAVANQPVSVSIDAADGSFMFYSSGIFTGECGTELDHGVTAVGYGRANGTDYWIV 303

Query: 294 KNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           KNSWG  WGE G+IRM+R +    GLCGIA  +SYP A
Sbjct: 304 KNSWGTVWGEQGYIRMQRGIAAKEGLCGIAMDSSYPTA 341


>gi|356542631|ref|XP_003539770.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  322 bits (826), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 164/337 (48%), Positives = 225/337 (66%), Gaps = 14/337 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L++   WA    +RTL + S+  +HE WMAQ  + YK+  EK +R+KIF++N + IE F
Sbjct: 14  LLLLFGFWAFSANTRTLEDASMHERHEQWMAQHGKVYKDHHEKELRYKIFQQNVKGIEGF 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N  GN+++KL +N+FADLT+EEF A +         IS  S       F Y    + +P 
Sbjct: 74  NNAGNKSHKLGVNQFADLTEEEFKAINKLKGYMWSKISRTST------FKYEHVTK-VPA 126

Query: 121 SIDWRARGAVTPVKNQG-SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GS 176
           ++DWR +GAVTP+K+QG  CG CW F+AVAA EGITK+ TG LISLSEQ+++DC     +
Sbjct: 127 TLDWRQKGAVTPIKSQGLKCGSCWAFAAVAATEGITKLTTGELISLSEQELIDCDTNGDN 186

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSEL 235
            GC  G + +AF +I++++GL  E  YPYQ  +G CN +  +   A I+ Y+DVP  +E 
Sbjct: 187 GGCKWGIIQEAFKFIVQNKGLATEASYPYQAVDGTCNAKVESKHVASIKGYEDVPANNET 246

Query: 236 ALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIK 294
           AL  AV+ QPVSV +D+S   FR+YS GV +G CG   +HAVT+VGYG S++G  YWLIK
Sbjct: 247 ALLNAVANQPVSVLVDSSDYDFRFYSSGVLSGSCGTTFDHAVTVVGYGVSDDGTKYWLIK 306

Query: 295 NSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           NSWG  WGE G+IR++RDV    G+CGIA +ASYPIA
Sbjct: 307 NSWGVYWGEQGYIRIKRDVAAKEGMCGIAMQASYPIA 343


>gi|297819568|ref|XP_002877667.1| hypothetical protein ARALYDRAFT_348033 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323505|gb|EFH53926.1| hypothetical protein ARALYDRAFT_348033 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 341

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 177/343 (51%), Positives = 220/343 (64%), Gaps = 20/343 (5%)

Query: 3   IIMVTWASLVMSRT--------LHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNF 54
           II    A ++ SRT        L E S   KHE WM++  R Y + +EK  RF+IFKKN 
Sbjct: 4   IIFFLLAIILSSRTSGATSRGGLFEASAIEKHEQWMSRFHRVYSDDSEKTSRFEIFKKNL 63

Query: 55  RFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMP---TRNISNQSQSYANNWFGY 111
           +F+E FN   N+TY L +NEF+DLTDEEF A +TG  +P   TR  +  S    +  F Y
Sbjct: 64  KFVESFNMNTNKTYTLDVNEFSDLTDEEFKARYTGLVVPEGMTRMSTTDSHETVS--FRY 121

Query: 112 PDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVL 171
            +       S+DWR  GAVT VK+Q  CGCCW FSAVAAVEG+TKI  G L+SLSEQQ+L
Sbjct: 122 ENVGE-TGESMDWREEGAVTSVKHQQQCGCCWAFSAVAAVEGMTKIAKGELVSLSEQQLL 180

Query: 172 DCSGSR-GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV 230
           DCS    GC GG M  AF YI+ +QG+T E  YPYQ  +  C  +   + AA I  Y+ V
Sbjct: 181 DCSTENDGCDGGIMWKAFDYIVENQGITAEDNYPYQGAQQTC--ESNHVAAATISGYETV 238

Query: 231 P-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG- 288
           P   E AL  AVS+QPVSVAI+ S   F +YSGG+F G CG +LNHAVTIVGYG S EG 
Sbjct: 239 PQNDEEALLKAVSQQPVSVAIEGSGYEFIHYSGGIFNGECGTHLNHAVTIVGYGVSEEGI 298

Query: 289 PYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
            YWL+KNSWG++WGE G++R+ RDV    G+CG+A  A YP+A
Sbjct: 299 KYWLLKNSWGESWGEDGYMRIMRDVDAPQGMCGLASLAYYPVA 341


>gi|356517358|ref|XP_003527354.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
 gi|356577767|ref|XP_003556994.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
          Length = 343

 Score =  322 bits (824), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 164/325 (50%), Positives = 214/325 (65%), Gaps = 12/325 (3%)

Query: 12  VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLS 71
           V  RTL + S+  +HE WM + A+ YK+  E+  RFKIFK+N  +IE FN   N+ Y L 
Sbjct: 25  VTCRTLQDASMYERHEEWMGRYAKVYKDPQERERRFKIFKENVNYIEAFNNAANKPYTLG 84

Query: 72  LNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVT 131
           +N+FADLT+EEFIA    +K    +   ++ +     F Y ++   +P ++DWR +GAVT
Sbjct: 85  INQFADLTNEEFIAPRNRFKGHMCSSITRTTT-----FKY-ENVTAIPSTVDWRQKGAVT 138

Query: 132 PVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYGGWMDDAF 188
           P+K+QG CGCCW FSAVAA EGI  +  G+LISLSEQ+V+DC      +GC GG+MD AF
Sbjct: 139 PIKDQGQCGCCWAFSAVAATEGIHALSAGKLISLSEQEVVDCDTKGEDQGCAGGFMDGAF 198

Query: 189 SYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVS 247
            +II++ GL +E  YPY+  +G CN +  A   A I  Y+DVP  +E AL+ AV+ QPVS
Sbjct: 199 KFIIQNHGLNNEPNYPYKAVDGKCNAKAAANHVATITGYEDVPVNNEKALQKAVANQPVS 258

Query: 248 VAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGF 306
           VAIDAS   F++Y  GVF G CG  L+H VT VGYG S +G  YWL+KNSWG  WGE G+
Sbjct: 259 VAIDASGSDFQFYQSGVFTGSCGTELDHGVTAVGYGVSADGTEYWLVKNSWGTEWGEEGY 318

Query: 307 IRMRRDVGG-AGLCGIARKASYPIA 330
           IRM+R V    GL GIA  ASYP A
Sbjct: 319 IRMQRGVKAEEGLXGIAMMASYPTA 343


>gi|413953667|gb|AFW86316.1| hypothetical protein ZEAMMB73_635707 [Zea mays]
          Length = 340

 Score =  322 bits (824), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 160/327 (48%), Positives = 218/327 (66%), Gaps = 20/327 (6%)

Query: 12  VMSRTLHEDS-ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKL 70
           + +R L +DS + A+HE WMAQ +R YK+ +EKA RF++FK N +FIE FN  GN  + L
Sbjct: 22  LAARDLSDDSAMVARHEQWMAQYSRVYKDASEKARRFEVFKANVKFIESFNAGGNNKFWL 81

Query: 71  SLNEFADLTDEEF--IASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRAR 127
            +N+FADLT++EF  I ++ G+K     I           F Y + S   LP +IDWR +
Sbjct: 82  GVNQFADLTNDEFRSIKTNKGFKSSNMKIPTG--------FRYENVSVDALPTTIDWRTK 133

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWM 184
           GAVTP+K+QG CGCCW FSAVAA EGI KI TG+L+SL+EQ+++DC      +GC GG M
Sbjct: 134 GAVTPIKDQGQCGCCWAFSAVAATEGIVKISTGKLVSLAEQELVDCDVHGEDQGCEGGLM 193

Query: 185 DDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSR 243
           DDAF +II + GLT E  YPY   +G C  + G+  AA I+ Y+DVP + E AL  AV+ 
Sbjct: 194 DDAFKFIINNGGLTTESSYPYTAADGKC--KSGSNSAATIKGYEDVPANDEAALMKAVAN 251

Query: 244 QPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWG 302
           QPVSVA+D     F++YS GV  G CG +L+H +  +GYG +++G  YWL+KNSWG  WG
Sbjct: 252 QPVSVAVDGGDMTFQFYSSGVMTGSCGTDLDHGIAAIGYGKTSDGTKYWLMKNSWGTTWG 311

Query: 303 EGGFIRMRRDVGGA-GLCGIARKASYP 328
           E G++RM +D+    G+CG+A + SYP
Sbjct: 312 ENGYLRMEKDISDKRGMCGLAMEPSYP 338


>gi|356545118|ref|XP_003540992.1| PREDICTED: thiol protease SEN102-like [Glycine max]
          Length = 337

 Score =  322 bits (824), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 162/336 (48%), Positives = 213/336 (63%), Gaps = 17/336 (5%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           + +++      +MSR LHE S+  +HE WMA+  + YK+ AEK  RF IFK N  FIE F
Sbjct: 13  LFLLLALGIPQMMSRKLHETSMRERHEQWMAEYGKVYKDAAEKEKRFLIFKHNVEFIESF 72

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N   N+ YKL +N  ADLT EEF AS  G K P   +S     Y N           +P 
Sbjct: 73  NAAANKPYKLGVNHLADLTVEEFKASRNGLKRPYE-LSTTPFKYEN--------VTAIPA 123

Query: 121 SIDWRARGAVTPVKNQGSC-GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---S 176
           +IDWR +GAVT +K+QG C G CW FS VAA EGI +I TG+L+SLSEQ+++DC      
Sbjct: 124 AIDWRTKGAVTSIKDQGQCAGSCWAFSTVAATEGIHQITTGKLVSLSEQELVDCDTKGVD 183

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSEL 235
           +GC GG+M+D F +II++ G+T E  YPY+  +G CN  +     A+I+ Y+ VP  SE 
Sbjct: 184 QGCEGGYMEDGFEFIIKNGGITSEANYPYKAVDGKCN--KATSPVAQIKGYEKVPPNSEK 241

Query: 236 ALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKN 295
            L+ AV+ QPVSV+IDA+  GF +YS G++ G CG  L+H VT VGYG +N   YWL+KN
Sbjct: 242 TLQKAVANQPVSVSIDANGEGFMFYSSGIYNGECGTELDHGVTAVGYGIANGTDYWLVKN 301

Query: 296 SWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
           SWG  WGE G++RM+R V    GLCGIA  +SYP A
Sbjct: 302 SWGTQWGEKGYVRMQRGVAAKHGLCGIALDSSYPTA 337


>gi|357160300|ref|XP_003578721.1| PREDICTED: oryzain beta chain-like [Brachypodium distachyon]
          Length = 349

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 156/336 (46%), Positives = 224/336 (66%), Gaps = 8/336 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L  +   ++++ +R L + ++  +HE WMAQ  R YK+ AEKA RF+ F+ N  FIE F
Sbjct: 12  VLGCICLCSTVLSARELGDAAMVERHEQWMAQHGRVYKDGAEKARRFEAFRNNVVFIESF 71

Query: 61  NREGNQ-TYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGL 118
           N  GN+  + L +N+F DLT++EF A+ T      RN +  +++     F Y + S   L
Sbjct: 72  NAAGNRRKFWLGVNQFTDLTNDEFRATKTNKGFIKRNAAAVNKASPTGTFRYSNVSADAL 131

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS-- 176
           P ++DWRA+GAVTP+KNQG CGCCW FSAVAA EGI ++ TG+L+ LSEQ+++DC  +  
Sbjct: 132 PAAVDWRAKGAVTPIKNQGQCGCCWAFSAVAATEGIVQLSTGKLVPLSEQELVDCDANGA 191

Query: 177 -RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-E 234
             GC GG MDDAF +II++ GLT E  YPY  ++G C  +      A I+ Y+DVP + E
Sbjct: 192 DHGCEGGEMDDAFEFIIKNGGLTSETNYPYTAQDGQCKAKNTINSVATIKGYEDVPANDE 251

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLI 293
            +L  AV+ QPVSVA+D     F++Y+GGV +G CG +L+H +  VGYG++++G  +WL+
Sbjct: 252 ASLMKAVAAQPVSVAVDGGDMVFQHYAGGVLSGSCGTSLDHGIVAVGYGAADDGTKFWLM 311

Query: 294 KNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYP 328
           KNSWG  WGE G+IRM +DV  A G+CG+A + SYP
Sbjct: 312 KNSWGTTWGEDGYIRMEKDVADAGGMCGLAMQPSYP 347


>gi|297740489|emb|CBI30671.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 172/335 (51%), Positives = 221/335 (65%), Gaps = 32/335 (9%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L+IM  WAS  +SRTLHE S+S +HE WM    RTYK+ AEK  RFKIFK+N  +IE  N
Sbjct: 12  LLIMGVWASQALSRTLHEVSMSERHEDWMGLYGRTYKDIAEKERRFKIFKENVEYIESVN 71

Query: 62  REGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRS 121
           +                    F AS  GY M +R  S++  S     F Y ++   +P S
Sbjct: 72  K--------------------FKASRNGYNMSSRPRSSEITS-----FRY-ENVAAVPSS 105

Query: 122 IDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---RG 178
           +DWR +GAVTP+K+QG CGCCW FSAVAA+EG+T+++TG LISLSEQ+++DC  S   +G
Sbjct: 106 MDWRKKGAVTPIKDQGQCGCCWAFSAVAAMEGVTQLKTGELISLSEQELVDCDTSGEDQG 165

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELAL 237
           C GG MD AF +II + GLT E  YPY+  +  CN ++ A  AA+I++Y+DVP  SE AL
Sbjct: 166 CGGGLMDSAFEFIIGNGGLTTEANYPYKGVDATCNKKKAASSAAKIKNYEDVPANSEAAL 225

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNS 296
             AV++ PVSVAIDA    F++YS GVF G CG  L+H VT VGYG +++G  YWL+KNS
Sbjct: 226 LKAVAQHPVSVAIDAGGSDFQFYSSGVFTGQCGTELDHGVTAVGYGKTDDGTKYWLVKNS 285

Query: 297 WGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           WG  WGE G+I M RD+G   GLCGIA +ASYP A
Sbjct: 286 WGTGWGEDGYIWMERDIGADEGLCGIAMEASYPTA 320


>gi|357160591|ref|XP_003578813.1| PREDICTED: vignain-like [Brachypodium distachyon]
          Length = 339

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 164/338 (48%), Positives = 228/338 (67%), Gaps = 17/338 (5%)

Query: 1   MLIIMVTWASLVMSRTLHED-SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           +L  +  +AS + +R L++D S+ A+HE WM+Q  R+YK+ AEK  +F++FK N  FI+ 
Sbjct: 11  ILGCLCFFASGLAARELNDDLSMVARHESWMSQYGRSYKDAAEKDRKFEVFKANAAFIDS 70

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGL 118
           FN + N  + L +N+FAD+T+EEF  + T        ISN+ +  A+  F Y + S   L
Sbjct: 71  FNAK-NHKFWLGINQFADITNEEFKVTKTNKGF----ISNKVR--ASTGFSYENVSIDAL 123

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---G 175
           P +IDWR +GAVTPVK+QG CGCCW FSAVAA EGI K+ TG+L+SLSEQ+++DC     
Sbjct: 124 PATIDWRTKGAVTPVKDQGQCGCCWAFSAVAATEGIVKLSTGKLVSLSEQELVDCDVHGE 183

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSE 234
            +GC GG MDDAF +II + GLT E  YPY   +G C  + G+  A  I+SY+DVP  +E
Sbjct: 184 DQGCEGGLMDDAFKFIITNGGLTQESSYPYDAEDGKC--KSGSKSAGTIKSYEDVPANNE 241

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLI 293
            AL  AV+ QPVSVA+D     F++YSGGV  G CG +L+H +  +GYG +++G  YWL+
Sbjct: 242 GALMKAVANQPVSVAVDGGDMTFQFYSGGVMTGSCGTDLDHGIAAIGYGVTSDGTKYWLM 301

Query: 294 KNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           KNSWG +WGE GF+RM +D+    G+CG+A + SYP A
Sbjct: 302 KNSWGTSWGENGFLRMEKDIADKKGMCGLAMEPSYPTA 339


>gi|357160572|ref|XP_003578808.1| PREDICTED: vignain-like [Brachypodium distachyon]
          Length = 339

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 163/338 (48%), Positives = 228/338 (67%), Gaps = 17/338 (5%)

Query: 1   MLIIMVTWASLVMSRTLHED-SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           +L  +    S++ +R L++D S+ A+HE WM Q  R YK+ AEKA +F++FK N  FI  
Sbjct: 11  ILGCLCLCGSVLAARELNDDLSMVARHENWMLQYGRVYKDAAEKAQKFEVFKANAEFINS 70

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGL 118
           FN  GN  + L +N+FAD+T+EEF A+ T        ISN+ +      F Y + S   L
Sbjct: 71  FNA-GNHKFWLGINQFADITNEEFKATKTNKGF----ISNKVR--VPTGFMYENMSFDAL 123

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---G 175
           P +IDWR +GAVTP+K+QG CGCCW FSAVAA+EGI K+ TG+L+SLSEQ+++DC     
Sbjct: 124 PATIDWRTKGAVTPIKDQGQCGCCWAFSAVAAMEGIVKLSTGKLVSLSEQELVDCDVHGE 183

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SE 234
            +GC GG MDDAF +II++ GLT E  YPY   +G C  + G+  AA I+SY+DVP  +E
Sbjct: 184 DQGCEGGLMDDAFKFIIKNGGLTQESNYPYDAADGKC--KSGSSSAATIKSYEDVPANNE 241

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLI 293
            AL  AV+ QPVSVA+D     F++YSGGV  G CG +L+H +  +GYG++++G  +W++
Sbjct: 242 GALMKAVANQPVSVAVDGGDMTFQFYSGGVMTGSCGTDLDHGIAAIGYGTTSDGTKFWIM 301

Query: 294 KNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           KNSWG +WGE GF+RM +D+    G+CG+A + SYP A
Sbjct: 302 KNSWGTSWGENGFLRMEKDIADKKGMCGLAMEPSYPTA 339


>gi|18401420|ref|NP_565649.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|4314384|gb|AAD15594.1| cysteine proteinase [Arabidopsis thaliana]
 gi|17381154|gb|AAL36389.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|20465849|gb|AAM20029.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|330252901|gb|AEC07995.1| cysteine proteinase-like protein [Arabidopsis thaliana]
          Length = 348

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 178/343 (51%), Positives = 223/343 (65%), Gaps = 15/343 (4%)

Query: 1   MLIIMVTW-ASLVMSR-TLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIE 58
           +L I +++  SL  SR +L E S   KHE WMA+  R Y ++ EK  RF IFKKN  F++
Sbjct: 8   ILTIFLSYRTSLATSRGSLFEASAIEKHEQWMARFNRVYSDETEKRNRFNIFKKNLEFVQ 67

Query: 59  KFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMP--TRNISNQSQSYANNWFGYPD-SR 115
            FN     TYK+ +NEF+DLTDEEF A+HTG  +P     IS  S       F Y + S 
Sbjct: 68  NFNMNNKITYKVDINEFSDLTDEEFRATHTGLVVPEAITRISTLSSGKNTVPFRYGNVSD 127

Query: 116 RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG 175
            G   S+DWR  GAVTPVK QG CG CW FSAVAAVEGITKI  G L+SLSEQQ+LDC  
Sbjct: 128 NG--ESMDWRQEGAVTPVKYQGRCGGCWAFSAVAAVEGITKITKGELVSLSEQQLLDCDR 185

Query: 176 --SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRRE---GYCNWQRGAMKAARIRSYQDV 230
             ++GC GG M  AF YII++QG+T E  YPYQ  +           + +AA I  Y+ V
Sbjct: 186 DYNQGCRGGIMSKAFEYIIKNQGITTEDNYPYQESQQTCSSSTTLSSSFRAATISGYETV 245

Query: 231 P-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP 289
           P  +E AL  AVS+QPVSV I+ +   FR+YSGGVF G CG +L+HAVTIVGYG S EG 
Sbjct: 246 PMNNEEALLQAVSQQPVSVGIEGTGAAFRHYSGGVFNGECGTDLHHAVTIVGYGMSEEGT 305

Query: 290 -YWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
            YW++KNSWG+ WGE G++R++RDV    G+CG+A  A YP+A
Sbjct: 306 KYWVVKNSWGETWGENGYMRIKRDVDAPQGMCGLAILAFYPLA 348


>gi|356517426|ref|XP_003527388.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 343

 Score =  321 bits (822), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 170/338 (50%), Positives = 218/338 (64%), Gaps = 16/338 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L  M   A  V  RTL + S+  +H  WMA+ A+ YK+  E+  RF+IFK+N  +IE F
Sbjct: 14  LLFCMGFLAFQVTCRTLQDASMYERHAQWMARYAKVYKDPQEREKRFRIFKENVNYIETF 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYK--MPTRNISNQSQSYANNWFGYPDSRRGL 118
           N   N++YKL +N+FADLT+EEFIA    +K  M +      +  Y N           +
Sbjct: 74  NSADNKSYKLDINQFADLTNEEFIAPRNRFKGHMCSSITRTTTFKYENVTV--------I 125

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--- 175
           P ++DWR +GAVTP+K+QG CGCCW FSAVAA EGI  +  G+LISLSEQ+V+DC     
Sbjct: 126 PSTVDWRQKGAVTPIKDQGQCGCCWAFSAVAATEGIHALNAGKLISLSEQEVVDCDTKGQ 185

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SE 234
            +GC GG+MD AF +II++ GL  E  YPY+  +G CN +  A  AA I  Y+DVP  +E
Sbjct: 186 DQGCAGGFMDGAFKFIIQNHGLNTEPNYPYKAADGKCNAKAAANHAATITGYEDVPVNNE 245

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLI 293
            AL+ AV+ QPVSVAIDAS   F++Y  GVF G CG  L+H VT VGYG S +G  YWL+
Sbjct: 246 KALQKAVANQPVSVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGVSADGTEYWLV 305

Query: 294 KNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           KNSWG  WGE G+IRM+R V    GLCGIA  ASYP A
Sbjct: 306 KNSWGTEWGEEGYIRMQRGVKAEEGLCGIAMMASYPTA 343


>gi|242072572|ref|XP_002446222.1| hypothetical protein SORBIDRAFT_06g005410 [Sorghum bicolor]
 gi|241937405|gb|EES10550.1| hypothetical protein SORBIDRAFT_06g005410 [Sorghum bicolor]
          Length = 340

 Score =  321 bits (822), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 163/338 (48%), Positives = 222/338 (65%), Gaps = 20/338 (5%)

Query: 1   MLIIMVTWASLVMSRTLHEDS-ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           +L + +   + + +R L++DS + A+HE WMAQ  R YK+  EKA RF++FK N +FIE 
Sbjct: 11  ILGLALFCGAALAARDLNDDSAMVARHEQWMAQYNRVYKDATEKAQRFEVFKANVKFIES 70

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHT--GYKMPTRNISNQSQSYANNWFGYPD-SRR 116
           FN  GN+ + L +N+FADLT++EF A+ T  G+K     +           F Y + S  
Sbjct: 71  FNAGGNRKFWLGVNQFADLTNDEFRATKTNKGFKPSPVKVPTG--------FRYENVSVD 122

Query: 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-- 174
            LP SIDWR +GAVTP+K+QG CGCCW FSAVAA EGI KI T +LISLSEQ+++DC   
Sbjct: 123 ALPASIDWRTKGAVTPIKDQGQCGCCWAFSAVAATEGIVKISTDKLISLSEQELVDCDVH 182

Query: 175 -GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS 233
              +GC GG MDDAF +II++ GLT E  YPY   +G C  + G   AA I+ ++DVP +
Sbjct: 183 GEDQGCEGGLMDDAFKFIIKNGGLTTESSYPYTATDGKC--KSGTNSAANIKGFEDVPAN 240

Query: 234 -ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YW 291
            E AL  AV+ QPVSVA+D     F+ YSGGV  G CG +L+H +  +GYG +++G  YW
Sbjct: 241 DEAALMKAVANQPVSVAVDGGDMTFQLYSGGVMTGSCGTDLDHGIAAIGYGQTSDGTKYW 300

Query: 292 LIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYP 328
           L+KNSWG  WGE G++RM +D+    G+CG+A + SYP
Sbjct: 301 LLKNSWGTTWGENGYLRMEKDISDKRGMCGLAMEPSYP 338


>gi|388497270|gb|AFK36701.1| unknown [Lotus japonicus]
          Length = 343

 Score =  320 bits (821), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 171/330 (51%), Positives = 222/330 (67%), Gaps = 16/330 (4%)

Query: 9   ASLVMSRTLHEDS---ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE-G 64
           A   MSRTL++++   ++  H+ WM Q  R+Y N AE   RFKIF +N  +IEKFN   G
Sbjct: 18  AYTAMSRTLYDETSSVVAKTHQQWMLQYGRSYTNDAEMEKRFKIFMENLEYIEKFNNAPG 77

Query: 65  NQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDW 124
           N++YKL LN+F+DLT+EEFIASHTG  +     S+ S+  +       D+    P S+DW
Sbjct: 78  NKSYKLDLNQFSDLTNEEFIASHTGLMIDPSKPSSSSKRASPASLDLSDT----PTSLDW 133

Query: 125 RARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYG 181
           R +GAVT VKNQG+CG CW FSAVAAVEGI KI+ G LISLSEQQ++DC+    ++GC G
Sbjct: 134 REQGAVTDVKNQGNCGSCWAFSAVAAVEGIVKIKNGNLISLSEQQLVDCASNEQNQGCGG 193

Query: 182 GWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAV 241
           G+MD+AFSYI  + G+  E  Y Y+   G C        AARI  Y+DVP  E  L  AV
Sbjct: 194 GFMDNAFSYITEN-GIASENDYQYRGGAGTCQNNEMITPAARISGYEDVPAGEDQLLLAV 252

Query: 242 SRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG--PYWLIKNSWGQ 299
           S+QPVSVAI A    F  Y  G+++GPCG++LNH VT+VGYG+S E    YWLIKNSWG+
Sbjct: 253 SQQPVSVAI-AVGQSFHLYKEGIYSGPCGSSLNHGVTLVGYGTSEEDGTKYWLIKNSWGE 311

Query: 300 NWGEGGFIRMRRDVGGA-GLCGIARKASYP 328
           +WGE G++R+ R+ G + G CGIA KAS+P
Sbjct: 312 SWGENGYMRLLRESGQSEGHCGIAVKASHP 341


>gi|302143411|emb|CBI21972.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  320 bits (820), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 163/333 (48%), Positives = 215/333 (64%), Gaps = 29/333 (8%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L ++  WAS   +R+LHE S+  +HE WM Q  R YK+  EK+ R+KIFK N   IE F
Sbjct: 14  LLFVLAAWASQATARSLHEASMYERHEDWMVQYGREYKDADEKSKRYKIFKDNVARIESF 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+  +++YKLS+NEFADLT+EEF AS   +K    +    S  Y N           +P 
Sbjct: 74  NKAMDKSYKLSINEFADLTNEEFRASRNRFKAHICSTEATSFKYEN--------VTAVPS 125

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRGCY 180
           ++DWR +GAVTP+K+QG CG CW FSAVAA+EGIT++ TG+LISLSEQ+++DC  S    
Sbjct: 126 TVDWRKKGAVTPIKDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSG--- 182

Query: 181 GGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRY 239
                         QG T+   YPY   +G CN ++ A  AA+I  Y+DVP  +E AL+ 
Sbjct: 183 ------------EDQGCTN---YPYAGTDGTCNRKKAAHPAAKINGYEDVPANNEKALQK 227

Query: 240 AVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWG 298
           AV+ QP++VAIDAS   F++YS GVF G CG  L+H V  VGYG+S++G  YWL+KNSW 
Sbjct: 228 AVAHQPIAVAIDASGSEFQFYSSGVFTGQCGTELDHGVAAVGYGTSDDGMKYWLVKNSWS 287

Query: 299 QNWGEGGFIRMRRDV-GGAGLCGIARKASYPIA 330
             WGE G+IRM+RDV    GLCGIA +ASYP A
Sbjct: 288 TGWGEEGYIRMQRDVTAKEGLCGIAMQASYPTA 320


>gi|302143412|emb|CBI21973.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  320 bits (820), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 163/333 (48%), Positives = 215/333 (64%), Gaps = 29/333 (8%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L ++  WAS   +R LHE S+  +HE WM Q  R YK+  EK+ R+KIFK N   IE F
Sbjct: 14  LLFVLAAWASQATARNLHEASMYERHEDWMVQYGREYKDADEKSKRYKIFKDNVARIESF 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+  +++YKLS+NEFADLT+EEF AS   +K    +    S  Y N           +P 
Sbjct: 74  NKAMDKSYKLSINEFADLTNEEFRASRNRFKAHICSTEATSFKYEN--------VTAVPS 125

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRGCY 180
           ++DWR +GAVTP+K+QG CG CW FSAVAA+EGIT++ TG+LISLSEQ+++DC  S    
Sbjct: 126 TVDWRKKGAVTPIKDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSG--- 182

Query: 181 GGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRY 239
                         QG T+   YPY   +G CN ++ A  AA+I  Y+DVP  +E AL+ 
Sbjct: 183 ------------EDQGCTN---YPYAGTDGTCNRKKAAHPAAKINGYEDVPANNEKALQK 227

Query: 240 AVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWG 298
           AV+ QP++VAIDA    F++YS GVF G CG  L+H V+ VGYG+S++G  YWL+KNSWG
Sbjct: 228 AVAHQPIAVAIDAGGSEFQFYSSGVFTGQCGTELDHGVSAVGYGTSDDGMKYWLVKNSWG 287

Query: 299 QNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
             WGE G+IRM+RDV    GLCGIA +ASYP A
Sbjct: 288 TGWGEEGYIRMQRDVTAKEGLCGIAMQASYPTA 320


>gi|356515046|ref|XP_003526212.1| PREDICTED: thiol protease SEN102-like [Glycine max]
          Length = 342

 Score =  319 bits (818), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 159/334 (47%), Positives = 217/334 (64%), Gaps = 8/334 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           + + +    S VM R LH+ ++  +HE WMA+  + YK+ AEK  RF+IFK N  FIE F
Sbjct: 13  LFLFLAVGISQVMPRKLHQTALRERHENWMAEYGKMYKDAAEKEKRFQIFKDNVEFIESF 72

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N  GN+ YKL +N  ADLT EEF  S  G K   R     + ++  N F Y ++   +P 
Sbjct: 73  NAAGNKPYKLGVNHLADLTLEEFKDSRNGLK---RTYEFSTTTFKLNGFKY-ENVTDIPE 128

Query: 121 SIDWRARGAVTPVKNQGS-CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRG 178
           +IDWR +GAVTP+K+QG  CG  W FS +AA EGI +I TG L+SLSEQ+++DC S   G
Sbjct: 129 AIDWRVKGAVTPIKDQGDQCGRFWAFSTIAATEGIHQISTGNLVSLSEQELVDCDSVDDG 188

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELAL 237
           C GG+M+D F +II++ G+T E  YPY+  +G CN    A   A+I+ Y+ VP+ SE AL
Sbjct: 189 CEGGFMEDGFEFIIKNGGITSETNYPYKGVDGTCNTTIAASPVAQIKGYEIVPSYSEEAL 248

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSW 297
           + AV+ QPVSV+I A++  F +YS G++ G CG +L+H VT VGYG+ N   YW++KNSW
Sbjct: 249 KKAVANQPVSVSIHATNATFMFYSSGIYNGECGTDLDHGVTAVGYGTENGTDYWIVKNSW 308

Query: 298 GQNWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
           G  WGE G+IRM R +    G+CGIA  +SYP A
Sbjct: 309 GTQWGEKGYIRMHRGIAAKHGICGIALDSSYPTA 342


>gi|357167196|ref|XP_003581047.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like
           [Brachypodium distachyon]
          Length = 338

 Score =  319 bits (818), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 165/338 (48%), Positives = 221/338 (65%), Gaps = 15/338 (4%)

Query: 2   LIIMVTWASLVMSRTLHEDS--ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           L++       + +R L +D   I+A+HE WMA+  R Y + AEKA R ++FK N  FIE 
Sbjct: 7   LVVCTFALGALGARDLADDDWLIAARHEQWMARYGRVYSDVAEKARRLEVFKANVGFIES 66

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGL 118
            N  GN  + L  N+FAD+T +EF A H GYKM    I +++++     F Y + S   L
Sbjct: 67  VN-AGNHKFWLEANQFADITKDEFRAMHKGYKMQV--IGSKARATG---FRYANVSIDDL 120

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---G 175
           P S+DWRA GAVTPVK+QG CGCCW FS VA++EGI K+ TG+LISLSEQ+++DC     
Sbjct: 121 PASVDWRANGAVTPVKDQGQCGCCWAFSTVASMEGIVKVSTGKLISLSEQELVDCDVGMQ 180

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-E 234
           ++GC GG MD+AF +I+ + GL  E  YPY   +G CN  + +  AA I+ Y+DVP + E
Sbjct: 181 NKGCGGGLMDNAFEFIVNNGGLDTEADYPYTGADGTCNSNKESNIAASIKGYEDVPANDE 240

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLI 293
            +L+ AV+ QPVS+A+D     FR+Y GGV  G CG  L+H V  VGYG + +G  YWL+
Sbjct: 241 ASLQKAVAAQPVSIAVDGGDDLFRFYKGGVLTGACGTELDHGVAAVGYGVAGDGTKYWLV 300

Query: 294 KNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           KNSWG +WGE GFIR+ RDV   AG+CG+A K SYP A
Sbjct: 301 KNSWGTSWGEDGFIRLERDVADEAGMCGLAMKPSYPTA 338


>gi|356543112|ref|XP_003540007.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 345

 Score =  319 bits (817), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 158/328 (48%), Positives = 214/328 (65%), Gaps = 7/328 (2%)

Query: 8   WASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQT 67
           W S +MSR L E   S +HE WMAQ  + YK+ AEK  RF+IFK N  FIE FN  G++ 
Sbjct: 20  WTSHIMSRRLFEACTSERHENWMAQYGKVYKDAAEKKKRFQIFKNNVHFIESFNTAGDKP 79

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           + LS+N+FADL DEEF A  T      R++   +     + F Y    + L  ++DWR R
Sbjct: 80  FNLSINQFADLHDEEFKALLTNGNKKVRSVVGTATETETS-FKYNRVTK-LLATMDWRKR 137

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRGCYGGWMD 185
           GAVTP+K+Q  CG CW FSAVAA+EGI +I T +L+SLSEQ+++DC    S GC GG+M+
Sbjct: 138 GAVTPIKDQRRCGSCWAFSAVAAIEGIHQITTSKLVSLSEQELVDCVKGESEGCNGGYME 197

Query: 186 DAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ 244
           DAF ++ +  G+  E  YPY+ ++  C  ++     ++I+ Y+ VP+ SE AL+ AV+ Q
Sbjct: 198 DAFEFVAKKGGIASESYYPYKGKDKSCKVKKETHGVSQIKGYEKVPSNSEKALQKAVAHQ 257

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGE 303
           PVSV ++A    F++YS G+F G CG N +HA+T+VGYG S  G  YWL+KNSWG  WGE
Sbjct: 258 PVSVYVEAGGNAFQFYSSGIFTGKCGTNTDHAITVVGYGKSRGGTKYWLVKNSWGAGWGE 317

Query: 304 GGFIRMRRDV-GGAGLCGIARKASYPIA 330
            G+IRM+RD+    GLCGIA  A YP A
Sbjct: 318 KGYIRMKRDIRAKEGLCGIAMNAFYPTA 345


>gi|356517308|ref|XP_003527330.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 342

 Score =  319 bits (817), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 161/336 (47%), Positives = 216/336 (64%), Gaps = 11/336 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           + +++  W S VMSR L E   S +HE WMAQ  R YK+ AEK  RF++FK N  FIE F
Sbjct: 12  LFLVLAVWTSHVMSRRLSEACTSERHEKWMAQYGRVYKDAAEKEKRFQVFKNNVHFIESF 71

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N  G++ + LS+N+FADL DEEF A     +     +   +++     F Y +S   +P 
Sbjct: 72  NAAGDKPFNLSINQFADLNDEEFKALLINVQKKASWVETSTETS----FRY-ESVTKIPA 126

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRG 178
           +IDWR RGAVTP+K+QG CG CW FSAVAA EGI +I TG+L+ LSEQ+++DC    S G
Sbjct: 127 TIDWRKRGAVTPIKDQGRCGSCWAFSAVAATEGIHQITTGKLVPLSEQELVDCVKGESEG 186

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELAL 237
           C GG++DDAF +I +  G+  E  YPY+     C  ++     A I+ Y+ VP+ +E AL
Sbjct: 187 CIGGYVDDAFEFIAKKGGIASETHYPYKGVNKTCKVKKETHGVAEIKGYEKVPSNNEKAL 246

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVF-AGPCGNNLNHAVTIVGYGSSNEG-PYWLIKN 295
             AV+ QPVSV IDA +  F+YYS G+F A  CG + NHAV +VGYG + +G  YWL+KN
Sbjct: 247 LKAVANQPVSVYIDAGTHAFKYYSSGIFNARNCGTDPNHAVAVVGYGKALDGSKYWLVKN 306

Query: 296 SWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPIA 330
           SWG  WGE G+IR++RD+    GLCGIA+   YP A
Sbjct: 307 SWGTEWGERGYIRIKRDIRAKEGLCGIAKYPYYPTA 342


>gi|356515056|ref|XP_003526217.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 342

 Score =  318 bits (814), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 161/336 (47%), Positives = 215/336 (63%), Gaps = 11/336 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           + +++  W S VMSR L E   S +HE WMAQ  R YK+ AEK  RF++FK N  FIE F
Sbjct: 12  LFLVLSVWTSHVMSRRLSEACTSERHEKWMAQYGRVYKDAAEKEKRFQVFKNNVHFIESF 71

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N  G++ + LS+N+FADL DEEF A     +     +   +Q+     F Y +S   +P 
Sbjct: 72  NAAGDKPFNLSINQFADLNDEEFKALLINVQKKASWVETSTQTS----FRY-ESVTKIPA 126

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRG 178
           +IDWR RGAVTP+K+QG CG CW FSAVAA EGI +I TG+L+ LSEQ+++DC    S G
Sbjct: 127 TIDWRKRGAVTPIKDQGRCGSCWAFSAVAATEGIHQITTGKLVPLSEQELVDCVKGESEG 186

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELAL 237
           C GG++DDAF +I +  G+  E  YPY+     C  ++     A I+ Y+ VP+ +E AL
Sbjct: 187 CIGGYVDDAFEFIAKKGGIASETHYPYKGVNKTCKVKKETHGVAEIKGYEKVPSNNEKAL 246

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVF-AGPCGNNLNHAVTIVGYGSSNEG-PYWLIKN 295
             AV+ QPVSV IDA +  F+YYS G+F    CG + NHAV +VGYG + +G  YWL+KN
Sbjct: 247 LKAVANQPVSVYIDAGTHAFKYYSSGIFNVRNCGTDPNHAVAVVGYGKALDGSKYWLVKN 306

Query: 296 SWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPIA 330
           SWG  WGE G+IR++RD+    GLCGIA+   YP A
Sbjct: 307 SWGTEWGERGYIRIKRDIRAKEGLCGIAKYPYYPTA 342


>gi|242072392|ref|XP_002446132.1| hypothetical protein SORBIDRAFT_06g002150 [Sorghum bicolor]
 gi|241937315|gb|EES10460.1| hypothetical protein SORBIDRAFT_06g002150 [Sorghum bicolor]
          Length = 337

 Score =  318 bits (814), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 157/326 (48%), Positives = 210/326 (64%), Gaps = 15/326 (4%)

Query: 9   ASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTY 68
           +S++ +R L + ++  +HE WM +  R YK+ AEKA RF+ FK N  F+E FN      +
Sbjct: 19  SSVLAARELSDAAMVERHENWMVEYGRVYKDAAEKARRFEAFKHNVAFVESFNTNKKNKF 78

Query: 69  KLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARG 128
            L +N+FADLT EEF A + G+K     +      Y N       S   LP ++DWR +G
Sbjct: 79  WLGVNQFADLTTEEFKA-NKGFKPTAEKVPTTGFKYENL------SVSALPTAVDWRTKG 131

Query: 129 AVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSRGCYGGWMD 185
           AVTP+KNQG CGCCW FSAVAA+EGI K+ TG LISLSEQ+++DC   S   GC GGWMD
Sbjct: 132 AVTPIKNQGQCGCCWAFSAVAAMEGIVKLSTGNLISLSEQELVDCDTHSMDEGCEGGWMD 191

Query: 186 DAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ 244
            AF ++I++ GL  E  YPY+  +G C  + G+  AA I+ ++DVP  +E AL  AV+ Q
Sbjct: 192 SAFEFVIKNGGLATESNYPYKAVDGKC--KGGSKSAATIKGHEDVPVNNEAALMKAVANQ 249

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGE 303
           PVSVA+DAS   F  YSGGV  G CG  L+H +  +GYG  ++G  YW++KNSWG  WGE
Sbjct: 250 PVSVAVDASDRTFMLYSGGVMTGSCGTELDHGIAAIGYGMESDGTKYWILKNSWGTTWGE 309

Query: 304 GGFIRMRRDVGGA-GLCGIARKASYP 328
            GF+RM +D+    G+CG+A K SYP
Sbjct: 310 KGFLRMEKDITDKRGMCGLAMKPSYP 335


>gi|125551397|gb|EAY97106.1| hypothetical protein OsI_19029 [Oryza sativa Indica Group]
          Length = 350

 Score =  318 bits (814), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 164/333 (49%), Positives = 219/333 (65%), Gaps = 19/333 (5%)

Query: 9   ASLVMSRTLHEDS-ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQT 67
           A +  +R L  D+ ++A+HE WMAQ  R YK+ AEKA R ++FK N  FIE FN  G   
Sbjct: 26  AIVAAARELGGDAAMAARHERWMAQHGRVYKDAAEKARRLEVFKANVAFIESFNAGGKNR 85

Query: 68  YKLSLNEFADLTDEEFIASHT---GYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSID 123
           Y L +N+FADLT EEF A+ T   G+  P   +        +  F Y + S   LP S+D
Sbjct: 86  YWLGVNQFADLTSEEFKATMTNSKGFSTPNNGVR------VSTGFKYENVSADALPASVD 139

Query: 124 WRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCY 180
           WR +GAVT +K+QG CGCCW FSAVAA+EGI K+ TG+LISLSEQ+++DC      +GC 
Sbjct: 140 WRTKGAVTRIKDQGQCGCCWAFSAVAAMEGIVKLSTGKLISLSEQELVDCDVDGNDQGCE 199

Query: 181 GGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRY 239
           GG +D AF +I+ + GLT E  YPY   +G C     A  AA IR Y+DVP + E +L  
Sbjct: 200 GGEIDGAFQFILSNGGLTAEANYPYTAEDGRCKTTAAADVAASIRGYEDVPANDEPSLMK 259

Query: 240 AVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWG 298
           AV+ QPVSVA+DAS   F++Y GGV AG CG +L+H VT++GYG++++G  YWL+KNSWG
Sbjct: 260 AVAGQPVSVAVDASK--FQFYGGGVMAGECGTSLDHGVTVIGYGAASDGTKYWLVKNSWG 317

Query: 299 QNWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
             WGE G++RM +D+    G+CG+A + SYP A
Sbjct: 318 TTWGEAGYLRMEKDIDDKRGMCGLAMQPSYPTA 350


>gi|302143415|emb|CBI21976.3| unnamed protein product [Vitis vinifera]
          Length = 322

 Score =  317 bits (812), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 164/336 (48%), Positives = 213/336 (63%), Gaps = 33/336 (9%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L ++  WAS   +R LHE S+  +HE WMAQ  R YK+  EK+ R+KIFK N   IE F
Sbjct: 14  LLFVLAAWASQATARNLHEASMYERHEDWMAQYGRVYKDADEKSKRYKIFKDNVARIESF 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+  +++YKLS+NEFADLT+EEF  S   +K    +    S  Y N           +P 
Sbjct: 74  NKAMDKSYKLSINEFADLTNEEFGTSRNRFKAHICSTEATSFKYEN--------VTAVPS 125

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---R 177
           +IDWR +GAVTP+K+QG CG CW FSAVAA+EGIT++ TG+LISLSEQ+++DC  S   +
Sbjct: 126 TIDWRKKGAVTPIKDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSGEDQ 185

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELA 236
           GC G                     YPY   +G CN ++ A  AA+I  Y+DVP  +E A
Sbjct: 186 GCNGA-------------------NYPYAGTDGTCNRKKAAHPAAKINGYEDVPANNEKA 226

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKN 295
           L+ AV  QP++VAIDA    F++YS GVF G CG  L+H V  VGYG+S++G  YWL+KN
Sbjct: 227 LQKAVVHQPIAVAIDAGGFEFQFYSSGVFTGQCGTELDHGVAAVGYGTSDDGMKYWLVKN 286

Query: 296 SWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           SWG  WGE G+IRM+RDV    GLCGIA +ASYP A
Sbjct: 287 SWGTGWGEEGYIRMQRDVTAKEGLCGIAMQASYPTA 322


>gi|242072398|ref|XP_002446135.1| hypothetical protein SORBIDRAFT_06g002170 [Sorghum bicolor]
 gi|241937318|gb|EES10463.1| hypothetical protein SORBIDRAFT_06g002170 [Sorghum bicolor]
          Length = 338

 Score =  317 bits (811), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 155/326 (47%), Positives = 209/326 (64%), Gaps = 14/326 (4%)

Query: 9   ASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTY 68
           +S++ +R L + ++  +HE WM +  R YK+ AEKA RF++FK N  F+E FN   N  +
Sbjct: 19  SSVLAARELSDAAMVERHENWMVEYGRVYKDAAEKARRFEVFKDNVAFVESFNTNKNNKF 78

Query: 69  KLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARG 128
            L +N+FADLT EEF A+     +    +      Y N       S   LP ++DWR +G
Sbjct: 79  WLGINQFADLTIEEFKANKGFKPISAEKVPTTGFKYENL------SVSALPTAVDWRTKG 132

Query: 129 AVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSRGCYGGWMD 185
           AVTP+KNQG CGCCW FSAVAA+EGI K+ TG LISLSEQ+++DC   S   GC GGWMD
Sbjct: 133 AVTPIKNQGQCGCCWAFSAVAAMEGIVKLSTGNLISLSEQELVDCDTHSMDEGCEGGWMD 192

Query: 186 DAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQ 244
            AF ++I++ GL     YPY+  +G C  + G+  AA I+ ++DVP + E AL  AV+ Q
Sbjct: 193 SAFEFVIKNGGLATVSSYPYKAVDGKC--KGGSKSAATIKGHEDVPVNDEAALMKAVANQ 250

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGE 303
           PVSVA+DAS   F  YSGGV  G CG  L+H +  +GYG  ++G  YW++KNSWG  WGE
Sbjct: 251 PVSVAVDASDRTFMLYSGGVMTGSCGTELDHGIAAIGYGVESDGTKYWILKNSWGTTWGE 310

Query: 304 GGFIRMRRDVGGA-GLCGIARKASYP 328
            GF+RM +D+    G+CG+A K SYP
Sbjct: 311 KGFLRMEKDISDKQGMCGLAMKPSYP 336


>gi|242072394|ref|XP_002446133.1| hypothetical protein SORBIDRAFT_06g002160 [Sorghum bicolor]
 gi|241937316|gb|EES10461.1| hypothetical protein SORBIDRAFT_06g002160 [Sorghum bicolor]
          Length = 338

 Score =  316 bits (809), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 155/326 (47%), Positives = 208/326 (63%), Gaps = 14/326 (4%)

Query: 9   ASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTY 68
           +S++ +R L + ++  +HE WM +  R YK+ AEKA RF+ FK N  F+E FN      +
Sbjct: 19  SSVLAARELSDAAMVERHENWMVEYGRVYKDAAEKARRFEAFKHNVAFVESFNTNKKNKF 78

Query: 69  KLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARG 128
            L +N+FADLT EEF A+     +    +      Y N       S   LP ++DWR +G
Sbjct: 79  WLGVNQFADLTTEEFKANKGFKPISAEMVPTTGFKYENL------SVSALPTAVDWRTKG 132

Query: 129 AVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSRGCYGGWMD 185
           AVTP+KNQG CGCCW FSAVAA+EGI K+ TG LISLSEQ+++DC   S   GC GGWMD
Sbjct: 133 AVTPIKNQGQCGCCWAFSAVAAMEGIVKLSTGNLISLSEQELVDCDTHSMDEGCEGGWMD 192

Query: 186 DAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQ 244
            AF ++I++ GL  E  YPY+  +G C  + G+  AA I+ ++DVP + E AL  AV+ Q
Sbjct: 193 SAFEFVIKNGGLATESSYPYKAVDGKC--KGGSKSAATIKGHEDVPVNDEAALMKAVANQ 250

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGE 303
           PVSVA+DAS   F  YSGGV  G CG  L+H +  +GYG  ++G  YW++KNSWG  WGE
Sbjct: 251 PVSVAVDASDRTFMLYSGGVMTGSCGTELDHGIAAIGYGVESDGTKYWILKNSWGTTWGE 310

Query: 304 GGFIRMRRDVGGA-GLCGIARKASYP 328
            GF+RM +D+    G+CG+A K SYP
Sbjct: 311 KGFLRMEKDISDKQGMCGLAMKPSYP 336


>gi|356517310|ref|XP_003527331.1| PREDICTED: vignain-like [Glycine max]
          Length = 342

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 160/336 (47%), Positives = 216/336 (64%), Gaps = 11/336 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           + +++  W S VMSR L E   S +HE WMAQ  R YK+ AEK  RF++FK N  FIE F
Sbjct: 12  LFLVLAVWTSHVMSRRLSEACTSERHEKWMAQYGRVYKDAAEKEKRFQVFKNNVHFIESF 71

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N  G++ + LS+N+FADL DEEF A     +     +   +++     F Y +S   +P 
Sbjct: 72  NAAGDKPFNLSINQFADLNDEEFKALLINVQKKASWVETSTETS----FRY-ESVTKIPA 126

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRG 178
           +ID R RGAVTP+K+QG CG CW FSAVAA EGI +I TG+L+ LSEQ+++DC    S G
Sbjct: 127 TIDRRKRGAVTPIKDQGRCGSCWAFSAVAATEGIHQITTGKLVPLSEQELVDCVKGESEG 186

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELAL 237
           C GG++DDAF +I +  G+  E  YPY+     C  ++     A I+ Y+ VP+ +E AL
Sbjct: 187 CIGGYVDDAFEFIAKKGGIASETHYPYKGVNKTCKVKKETHGVAEIKGYEKVPSNNEKAL 246

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVF-AGPCGNNLNHAVTIVGYGSS-NEGPYWLIKN 295
             AV+ QPVSV IDA +  F+YYS G+F A  CG + NHAV +VGYG + ++  YWL+KN
Sbjct: 247 LKAVANQPVSVYIDAGTHAFKYYSSGIFNARNCGTDPNHAVAVVGYGKALDDSKYWLVKN 306

Query: 296 SWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPIA 330
           SWG  WGE G+IR++RD+    GLCGIA+   YPIA
Sbjct: 307 SWGTEWGERGYIRIKRDIRAKEGLCGIAKYPYYPIA 342


>gi|414588010|tpg|DAA38581.1| TPA: hypothetical protein ZEAMMB73_156486 [Zea mays]
          Length = 347

 Score =  315 bits (807), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 160/340 (47%), Positives = 222/340 (65%), Gaps = 21/340 (6%)

Query: 4   IMVTWASLVMSRTLHED---SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           + +  A+++ +R L  D   ++ A+HE WM Q  R YK++ +KA RF +FK N +FIE F
Sbjct: 16  VCLCSAAVLAARELGGDDELAMVARHEQWMVQHGRVYKDETDKAHRFLVFKANVKFIESF 75

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRR 116
           N     GN+ + L +N+FADLT++EF A+ T          N +       F Y + S  
Sbjct: 76  NAAAAAGNRKFWLGVNQFADLTNDEFRATKTNKGF------NPNVVKVPTGFRYQNLSID 129

Query: 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-- 174
            LP+++DWR +GAVTP+K+QG CGCCW FSAVAA EGI KI TG+L SLSEQ+++DC   
Sbjct: 130 ALPQTVDWRTKGAVTPIKDQGQCGCCWAFSAVAATEGIVKISTGKLTSLSEQELVDCDVH 189

Query: 175 -GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS 233
              +GC GG MDDAF +II++ GLT E  YPY  ++G C  + G+  AA I+ Y+DVP +
Sbjct: 190 GEDQGCNGGEMDDAFKFIIKNGGLTTESNYPYTAQDGQC--KSGSNGAATIKGYEDVPAN 247

Query: 234 -ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YW 291
            E AL  AV+ QPVSVA+D     F++YSGGV  G CG +L+H +  +GYG +++G  YW
Sbjct: 248 DEAALMKAVASQPVSVAVDGGDMTFQFYSGGVMTGSCGTDLDHGIAAIGYGKTSDGTKYW 307

Query: 292 LIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           L+KNSWG  WGE GF+RM +D+    G+CG+A + SYP A
Sbjct: 308 LMKNSWGTTWGENGFLRMEKDIADKKGMCGLAMQPSYPTA 347


>gi|77554625|gb|ABA97421.1| Vignain precursor, putative [Oryza sativa Japonica Group]
 gi|222630746|gb|EEE62878.1| hypothetical protein OsJ_17681 [Oryza sativa Japonica Group]
          Length = 350

 Score =  314 bits (805), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 162/331 (48%), Positives = 217/331 (65%), Gaps = 19/331 (5%)

Query: 9   ASLVMSRTLHEDS-ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQT 67
           A +  +R L  D+ ++A+HE WMAQ  R YK+ AEKA R ++FK N  FIE FN  G   
Sbjct: 26  AIVAAARELGGDAAMAARHERWMAQHGRVYKDAAEKARRLEVFKANVAFIESFNAGGKNR 85

Query: 68  YKLSLNEFADLTDEEFIASHT---GYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSID 123
           Y L +N+FADLT EEF A+ T   G+  P   +        +  F Y + S   LP S+D
Sbjct: 86  YWLGVNQFADLTSEEFKATMTNSKGFSTPNNGVR------VSTGFKYENVSADALPASVD 139

Query: 124 WRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCY 180
           WR +GAVT +K+QG CGCCW FSAVAA+EG  K+ TG+LISLSEQ+++DC      +GC 
Sbjct: 140 WRTKGAVTRIKDQGQCGCCWAFSAVAAMEGFVKLSTGKLISLSEQELVDCDVDGNDQGCE 199

Query: 181 GGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRY 239
           GG +D AF +I+ + GLT E  YPY   +G C     A  AA IR Y+DVP + E +L  
Sbjct: 200 GGEIDGAFQFILSNGGLTAEANYPYTAEDGRCKTTAAADVAASIRGYEDVPANDEPSLMK 259

Query: 240 AVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWG 298
           AV+ QPVSVA+DAS   F++Y GGV AG CG +L+H VT++GYG++++G  YWL+KNSWG
Sbjct: 260 AVAGQPVSVAVDASK--FQFYGGGVMAGECGTSLDHGVTVIGYGAASDGTKYWLVKNSWG 317

Query: 299 QNWGEGGFIRMRRDVGGA-GLCGIARKASYP 328
             WGE G++RM +D+    G+CG+A + SYP
Sbjct: 318 TTWGEAGYLRMEKDIDDKRGMCGLAMQPSYP 348


>gi|116309130|emb|CAH66233.1| H0825G02.10 [Oryza sativa Indica Group]
          Length = 339

 Score =  314 bits (804), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 161/319 (50%), Positives = 210/319 (65%), Gaps = 20/319 (6%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTD 80
           ++ A+HE WM Q  R YK+  EKA RF+IFK N  FIE FN  GN  + LS+N+FADLT+
Sbjct: 32  AMVARHERWMEQYGRVYKDATEKARRFEIFKANVAFIESFN-AGNHKFWLSVNQFADLTN 90

Query: 81  EEFIASHT--GYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRARGAVTPVKNQG 137
            EF A+ T  G+   T  +           F Y + S   LP ++DWR +GAVTP+K+QG
Sbjct: 91  YEFRATKTNKGFIPSTVRVPTT--------FRYENVSIDTLPATVDWRTKGAVTPIKDQG 142

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRS 194
            CGCCW FSAVAA+EGI K+ TG+LISLSEQ+++DC      +GC GG MDDAF +II++
Sbjct: 143 QCGCCWAFSAVAAMEGIVKLSTGKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKN 202

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDAS 253
            GLT E  YPY   +G CN   G+  AA I+ Y+DVP  +E AL  AV+ QPVSVA+D  
Sbjct: 203 GGLTTESKYPYTAADGKCN--GGSNSAATIKGYEDVPANNEAALMKAVANQPVSVAVDGG 260

Query: 254 SPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRD 312
              F++YSGGV  G CG +L+H +  +GYG   +G  YWL+KNSWG  WGE GF+RM +D
Sbjct: 261 DMTFQFYSGGVMTGSCGTDLDHGIVAIGYGKDGDGTQYWLLKNSWGTTWGENGFLRMEKD 320

Query: 313 VGGA-GLCGIARKASYPIA 330
           +    G+CG+A + SYP A
Sbjct: 321 ISDKRGMCGLAMEPSYPTA 339


>gi|116786779|gb|ABK24233.1| unknown [Picea sitchensis]
          Length = 463

 Score =  314 bits (804), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 160/322 (49%), Positives = 212/322 (65%), Gaps = 10/322 (3%)

Query: 14  SRTLHED-SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSL 72
           S+ L ED +I   +ELW+AQ  + Y    EK  RF +FK NF +I + N +GN +YKL L
Sbjct: 31  SKDLREDDAIMELYELWLAQHKKAYNGLGEKQNRFSVFKDNFLYIHQHNNQGNPSYKLGL 90

Query: 73  NEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTP 132
           N+FADL+ EEF A++ G K+ T+   + S S     + Y D    LP SIDWR +GAVT 
Sbjct: 91  NQFADLSHEEFKATYLGAKLDTKKRLSNSPS---PRYQYSDGED-LPESIDWREKGAVTA 146

Query: 133 VKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSY 190
           VK+QGSCG CW FS VAAVEGI +I TG L SLSEQ+++DC  S  +GC GG MD AF +
Sbjct: 147 VKDQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCDTSYNQGCNGGLMDYAFQF 206

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVA 249
           II + GL  E  YPY+  +G C+  R       I  Y+DVP   E +L+ A + QP+SVA
Sbjct: 207 IINNGGLDSEDDYPYKANDGSCDAYRKNAHVVTIDDYEDVPENDEKSLKKAAANQPISVA 266

Query: 250 IDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRM 309
           I+AS   F++Y  GVF   CG  L+H VT+VGYGS +   YW++KNSWG++WGE GFIR+
Sbjct: 267 IEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGTDYWIVKNSWGKSWGEKGFIRL 326

Query: 310 RRDVGG--AGLCGIARKASYPI 329
           +R++ G   G+CGIA +ASYP+
Sbjct: 327 QRNIEGVSTGMCGIAMEASYPL 348


>gi|2414570|emb|CAB16317.1| cysteine proteinase precursor [Nicotiana tabacum]
          Length = 374

 Score =  314 bits (804), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 152/314 (48%), Positives = 206/314 (65%), Gaps = 6/314 (1%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           ED +  ++E+W+A+  R Y    EK  RF+IFK N RFIE  N  GN+TYK+ LN+FADL
Sbjct: 43  EDQVKNRYEMWLAEHGRAYNALGEKEKRFEIFKDNLRFIEGHNNSGNRTYKVGLNQFADL 102

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
           T+EE+   + G K   R    +S++ +  +   P+    +P S+DWR RGAV P+KNQGS
Sbjct: 103 TNEEYRTMYLGTKSDARRRFVKSKNPSQRYASRPNEL--MPHSVDWRKRGAVAPIKNQGS 160

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYIIRSQG 196
           CG CW FS VAAVEGI +I TG +I+LSEQ+++DC    + GC GG MD AF +II + G
Sbjct: 161 CGSCWAFSTVAAVEGINQIVTGEMITLSEQELVDCDRVQNSGCNGGLMDYAFEFIISNGG 220

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPG 256
           +  E+ YPY+  EG C+  R   K   I  Y+DVP +E AL+ AV+ QPV VAI+AS   
Sbjct: 221 MDTEKHYPYRGVEGRCDPVRKNYKVVSIDGYEDVPRNERALQKAVAHQPVCVAIEASGRA 280

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA 316
           F+ YS GVF G CG  ++H V +VGYGS +   YW+++NSWG  WGE G+++M R+V  +
Sbjct: 281 FQLYSSGVFTGECGEEVDHGVVVVGYGSEDGVDYWIVRNSWGTKWGENGYVKMERNVKKS 340

Query: 317 --GLCGIARKASYP 328
             G CGI  +ASYP
Sbjct: 341 HLGKCGIMTEASYP 354


>gi|297851332|ref|XP_002893547.1| peptidase C1A papain family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339389|gb|EFH69806.1| peptidase C1A papain family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 345

 Score =  313 bits (803), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 166/325 (51%), Positives = 221/325 (68%), Gaps = 19/325 (5%)

Query: 17  LHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFA 76
           LHE +I   H+ WM   +R Y ++ EK MR ++F +N +FIE FN  G+Q+YKL +N+F 
Sbjct: 29  LHEPTIFYYHQKWMINFSRVYDDEFEKQMRLEVFTENLKFIENFNNMGSQSYKLGVNKFT 88

Query: 77  DLTDEEFIASHTGYK-----MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVT 131
           D T EEF+A+HTG        P   ++  + ++  NW         L  + DWR  GAVT
Sbjct: 89  DWTKEEFLATHTGLSGINVTSPFEVVNETTPAW--NW----TVSDVLGTTKDWRNEGAVT 142

Query: 132 PVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFS 189
           PVK QG CG CW FSA+AAVEG+TKI  G LISLSEQQ+LDC+   + GC GG M +AF+
Sbjct: 143 PVKYQGECGGCWAFSAIAAVEGLTKIARGNLISLSEQQLLDCAREQNNGCKGGTMIEAFN 202

Query: 190 YIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSV 248
           YI+++ G++ E  YPYQ +EG C  +   + A  IR +++VP+ +E AL  AVSRQPV+V
Sbjct: 203 YIVKNGGVSSENAYPYQVKEGPC--RSNDIPAIVIRGFENVPSNNERALLEAVSRQPVAV 260

Query: 249 AIDASSPGFRYYSGGVF-AGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGF 306
            IDAS  GF +YSGGV+ A  CG ++NHAVT+VGYG+S EG  YWL KNSWG+ WGE G+
Sbjct: 261 DIDASETGFIHYSGGVYNARDCGTSVNHAVTLVGYGTSQEGIKYWLAKNSWGKTWGENGY 320

Query: 307 IRMRRDVG-GAGLCGIARKASYPIA 330
           IR+RRDV    G+CG+A+ ASYP+A
Sbjct: 321 IRIRRDVEWPQGMCGVAQYASYPVA 345


>gi|357113934|ref|XP_003558756.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like
           [Brachypodium distachyon]
          Length = 346

 Score =  313 bits (801), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 156/317 (49%), Positives = 205/317 (64%), Gaps = 13/317 (4%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           +++++A+HE WMAQ  R YK+ AEKA R ++FK N  FIE FN E N  + L  N+FADL
Sbjct: 34  DNAMAARHEQWMAQFGRVYKDPAEKAHRLEVFKANVAFIESFNAE-NHEFWLGANQFADL 92

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRARGAVTPVKNQG 137
           T++EF AS T      + I       A   F Y D S   LP S+DWR +GAVTP+KNQG
Sbjct: 93  TNDEFRASKT-----NKGIKQGGVRDAPTGFKYSDVSIDALPASVDWRTKGAVTPIKNQG 147

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRS 194
            CG CW FSAVAA EG+ K+ TG+L+SLSEQ+++DC      +GC GGWMDDAF +II++
Sbjct: 148 QCGSCWAFSAVAATEGVVKLSTGKLVSLSEQELVDCDVHGVDQGCMGGWMDDAFKFIIKN 207

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDAS 253
            GLT E  YPY   +  C        AA I+ Y+DVP + E AL  AV+ QPVSV +D  
Sbjct: 208 GGLTTEANYPYTGEDDKCKSNETVNVAATIKGYEDVPANDESALMKAVAHQPVSVVVDGG 267

Query: 254 SPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRD 312
              F+ Y+GGV  G CG  ++H +  +GYG+++ G  YWL+KNSWG  WGE GF+RM +D
Sbjct: 268 DMTFQLYAGGVMTGSCGVEMDHGIAAIGYGATSNGTKYWLMKNSWGTTWGEKGFLRMAKD 327

Query: 313 VGGA-GLCGIARKASYP 328
           +    G+CG+A K SYP
Sbjct: 328 IPDKRGMCGLAMKPSYP 344


>gi|356515052|ref|XP_003526215.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 339

 Score =  313 bits (801), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 156/333 (46%), Positives = 217/333 (65%), Gaps = 12/333 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           + +I+  W   VMSR L E   S +HE WMAQ  + Y + AEK  RF+IFK N +FIE F
Sbjct: 12  LFLILTVWTFHVMSRRLSEVCTSERHEKWMAQYGKLYTDAAEKEKRFQIFKNNVQFIESF 71

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N  G++ + LS+N+FADL +EEF AS    +     +   +++     F Y +S   +P 
Sbjct: 72  NAAGDKPFNLSINQFADLHNEEFKASLINVQKKESGVETATETS----FRY-ESITKIPV 126

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRG 178
           ++DWR RGAVTP+K+QG+CG CW FS VAA+EGI +I TG+L+SLSEQ+++DC    S G
Sbjct: 127 TMDWRKRGAVTPIKDQGNCGSCWAFSTVAAIEGIHQITTGKLVSLSEQELVDCVKGKSEG 186

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELAL 237
           C  G+ ++AF ++ ++ GL  E  YPY+     C  ++     A+I+ Y++VP+ SE AL
Sbjct: 187 CNFGYKEEAFEFVAKNGGLASEISYPYKANNKTCMVKKETQGVAQIKGYENVPSNSEKAL 246

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNS 296
             AV+ QPVSV IDA +   ++YS G+F G CG   NHAVT++GYG +  G  YWL+KNS
Sbjct: 247 LKAVANQPVSVYIDAGA--LQFYSSGIFTGKCGTAPNHAVTVIGYGKARGGAKYWLVKNS 304

Query: 297 WGQNWGEGGFIRMRRDV-GGAGLCGIARKASYP 328
           WG  WGE G+I+M+RD+    GLCGIA  ASYP
Sbjct: 305 WGTKWGEKGYIKMKRDIRAKEGLCGIATNASYP 337


>gi|357452075|ref|XP_003596314.1| Cysteine proteinase [Medicago truncatula]
 gi|355485362|gb|AES66565.1| Cysteine proteinase [Medicago truncatula]
          Length = 341

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 160/323 (49%), Positives = 201/323 (62%), Gaps = 14/323 (4%)

Query: 14  SRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLN 73
           SRTL  D +   HE WM Q  + YK   EK  RF IFK+N  +IE FN  GN++YKL LN
Sbjct: 27  SRTLQNDPMYEMHEQWMVQHGKVYKAAHEKQKRFGIFKENVNYIEAFNNVGNKSYKLGLN 86

Query: 74  EFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPV 133
            FADLT+ EFIA+   +          +  Y N           +P ++DWR  GAVTPV
Sbjct: 87  HFADLTNHEFIAARNKFNGYLHGSIITTFKYKN--------VSDVPSAVDWRQEGAVTPV 138

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---RGCYGGWMDDAFSY 190
           KNQG CGCCW FSAVA+ EGI K+ TG L+SLSEQ+++DC  +   +GC GG MDDAF +
Sbjct: 139 KNQGQCGCCWAFSAVASTEGIHKLTTGNLVSLSEQELVDCDTNGEDQGCEGGLMDDAFEF 198

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVA 249
           II++ GL+ E  YPYQ  +G CN       AA I  Y++VP + E AL+ AV+ QPVSVA
Sbjct: 199 IIQNNGLSTEAEYPYQGVDGTCNKTEVGSSAATISGYENVPVNDEQALQKAVANQPVSVA 258

Query: 250 IDASSPGFRYYSGGVFAGPCGNNLNH-AVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIR 308
           IDAS   F++Y  GVF G CG  L+H    +      +E  YWL+KNSWG  WGE G+IR
Sbjct: 259 IDASGSDFQFYKSGVFTGSCGTELDHGVAVVGYGVGEDETEYWLVKNSWGTQWGEEGYIR 318

Query: 309 MRRDVGGA-GLCGIARKASYPIA 330
           M+R V  + GLCGIA + SYP A
Sbjct: 319 MQRGVDASEGLCGIAMQPSYPTA 341


>gi|356515044|ref|XP_003526211.1| PREDICTED: LOW QUALITY PROTEIN: thiol protease SEN102-like [Glycine
           max]
          Length = 337

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 155/333 (46%), Positives = 217/333 (65%), Gaps = 15/333 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           + +++    S VMSR LHE S+  +HE W+A+  + YK  AEK   F+IFK+N  FIE F
Sbjct: 13  LFLLLSIEISQVMSRKLHETSLREEHENWIARYGQVYKVAAEKET-FQIFKENVEFIESF 71

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N   N+ YKL +N FADLT EEF     G K        ++  ++   F Y ++   +P 
Sbjct: 72  NAAANKPYKLGVNLFADLTLEEFKDFRFGLK--------KTHEFSITPFKY-ENVTDIPE 122

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SR 177
           ++DWR +GAVTP+K+QG CG CW FS VAA EGI +I TG L+SL EQ+++ C      +
Sbjct: 123 ALDWREKGAVTPIKDQGQCGSCWAFSTVAATEGIHQITTGNLVSLXEQELVSCDTKGVDQ 182

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GG+M+D F +II++ G+T +  YPY+   G CN    A   A+I+ Y+ VP+ SE A
Sbjct: 183 GCEGGYMEDGFEFIIKNGGITTKANYPYKGVNGTCNTTIAASTVAQIKGYETVPSYSEEA 242

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNS 296
           L+ AV+ QPVSV+IDA++  F +Y+GG++ G CG +L+H VT VGYG++NE  YW++KNS
Sbjct: 243 LQKAVANQPVSVSIDANNGHFMFYAGGIYTGECGTDLDHGVTAVGYGTTNETDYWIVKNS 302

Query: 297 WGQNWGEGGFIRMRRDVG-GAGLCGIARKASYP 328
           WG  W E GFIRM+R +    GLCG+A  +SYP
Sbjct: 303 WGTGWDEKGFIRMQRGITVKHGLCGVALDSSYP 335


>gi|413917937|gb|AFW57869.1| hypothetical protein ZEAMMB73_830006 [Zea mays]
          Length = 443

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 157/326 (48%), Positives = 215/326 (65%), Gaps = 14/326 (4%)

Query: 1   MLIIMVTWASLV----MSRTL--HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNF 54
           +L+ +V WA  +     +R L   + ++ A+HE WMA+  R Y + AEKA RF++FK N 
Sbjct: 10  VLLSVVAWACALSGSLAARDLADQDQAMVARHEEWMAKYDRVYSDAAEKARRFEVFKANM 69

Query: 55  RFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQS-YANNWFGYPD 113
             IE  N  GN  + L  N FADLTD+EF A+ TGY+  T   S++ +S  A   F Y +
Sbjct: 70  ALIESVN-AGNHKFWLEANRFADLTDDEFRATWTGYRPKTAAASSKGRSRTATTGFKYAN 128

Query: 114 -SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLD 172
            S   +P S+DWR +GAVTP+KNQG CGCCW FSAVA++EG+ K+ TG+L+SLSEQ+++D
Sbjct: 129 VSLDDVPASVDWRTKGAVTPIKNQGECGCCWAFSAVASMEGVVKLSTGKLVSLSEQELVD 188

Query: 173 CS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQD 229
           C      +GC GG MDDAF +I+ + GLT E  YPY   +G CN    +  AA I+ Y+D
Sbjct: 189 CDVNGMDQGCEGGEMDDAFDFIVGNGGLTTESRYPYTASDGTCNSNEASGDAASIKGYED 248

Query: 230 VPTS-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG 288
           VP + E +LR AV+ QPVSVA+D     FR+Y GGV +G CG  L+H +  VGYG +++G
Sbjct: 249 VPANDEASLRKAVANQPVSVAVDGGDSHFRFYKGGVLSGACGTELDHGIAAVGYGVASDG 308

Query: 289 P-YWLIKNSWGQNWGEGGFIRMRRDV 313
             YW++KNSWG +WGE G+IRM RD+
Sbjct: 309 TKYWVMKNSWGTSWGEAGYIRMERDI 334


>gi|356554921|ref|XP_003545789.1| PREDICTED: LOW QUALITY PROTEIN: thiol protease SEN102-like [Glycine
           max]
          Length = 439

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 164/338 (48%), Positives = 213/338 (63%), Gaps = 16/338 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           ML+     A  V   TL + S+  +HE WM +  + YK+  E+  RF+IF +N  ++E F
Sbjct: 110 MLLCTAFLAFQVTCCTLQDASMYERHEQWMTRHGKVYKDPREREKRFRIFNENVNYVEAF 169

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYK--MPTRNISNQSQSYANNWFGYPDSRRGL 118
           N   N+ YKL +N+F DLT++EFIA    +K  M +  I   +  Y N           +
Sbjct: 170 NNAANKPYKLGINQFXDLTNQEFIAPRNRFKGHMCSSIIRTTTFKYEN--------VTTV 221

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--- 175
           P ++DWR  GAVTPVK+QG CGCCW FSAVAA EGI  +  G+LISLSEQ+++DC     
Sbjct: 222 PSTVDWRQNGAVTPVKDQGQCGCCWAFSAVAATEGIHALSGGKLISLSEQELVDCDTKGV 281

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSE 234
            +GC GG MDDA+ +II++ GL  E  YPY+  +G CN    A  AA I  Y+DVP  +E
Sbjct: 282 DQGCEGGLMDDAYKFIIQNHGLNTEANYPYKGVDGKCNANEAANHAATITGYEDVPANNE 341

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLI 293
            AL+ AV+ QPVSVAIDASS  F++Y  G F G CG  L+H VT VGYG S+ G  YWL+
Sbjct: 342 KALQKAVANQPVSVAIDASSSDFQFYKSGAFTGSCGTELDHGVTAVGYGVSDHGTKYWLV 401

Query: 294 KNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           KNSWG  WGE G+IRM+R V    G+CGIA +ASYP A
Sbjct: 402 KNSWGTEWGEEGYIRMQRGVDSEEGVCGIAMQASYPTA 439


>gi|38346003|emb|CAD40112.2| OSJNBa0035O13.5 [Oryza sativa Japonica Group]
 gi|125589427|gb|EAZ29777.1| hypothetical protein OsJ_13835 [Oryza sativa Japonica Group]
          Length = 339

 Score =  312 bits (799), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 160/319 (50%), Positives = 209/319 (65%), Gaps = 20/319 (6%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTD 80
           ++ A+HE WM Q  R YK+  EKA RF+IFK N  FIE FN  GN  + L +N+FADLT+
Sbjct: 32  AMVARHERWMEQYGRVYKDATEKARRFEIFKANVAFIESFN-AGNHKFWLGVNQFADLTN 90

Query: 81  EEFIASHT--GYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRARGAVTPVKNQG 137
            EF A+ T  G+   T  +           F Y + S   LP ++DWR +GAVTP+K+QG
Sbjct: 91  YEFRATKTNKGFIPSTVRVPTT--------FRYENVSIDTLPATVDWRTKGAVTPIKDQG 142

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRS 194
            CGCCW FSAVAA+EGI K+ TG+LISLSEQ+++DC      +GC GG MDDAF +II++
Sbjct: 143 QCGCCWAFSAVAAMEGIVKLSTGKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKN 202

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDAS 253
            GLT E  YPY   +G CN   G+  AA I+ Y+DVP  +E AL  AV+ QPVSVA+D  
Sbjct: 203 GGLTTESKYPYTAADGKCN--GGSNSAATIKGYEDVPANNEAALMKAVANQPVSVAVDGG 260

Query: 254 SPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRD 312
              F++YSGGV  G CG +L+H +  +GYG   +G  YWL+KNSWG  WGE GF+RM +D
Sbjct: 261 DMTFQFYSGGVMTGSCGTDLDHGIVAIGYGKDGDGTQYWLLKNSWGTTWGENGFLRMEKD 320

Query: 313 VGGA-GLCGIARKASYPIA 330
           +    G+CG+A + SYP A
Sbjct: 321 ISDKRGMCGLAMEPSYPTA 339


>gi|242068363|ref|XP_002449458.1| hypothetical protein SORBIDRAFT_05g013840 [Sorghum bicolor]
 gi|241935301|gb|EES08446.1| hypothetical protein SORBIDRAFT_05g013840 [Sorghum bicolor]
          Length = 350

 Score =  311 bits (798), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 167/343 (48%), Positives = 227/343 (66%), Gaps = 25/343 (7%)

Query: 2   LIIMVTWASLVMSRTLH-------EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNF 54
           L+I+     +V +R L        E+++  +H+ WMA+  RTYK++AEKA RF++FK N 
Sbjct: 18  LMILAVMTMVVEARDLSTSTGGYGEEAMKVRHQQWMAEHGRTYKDEAEKARRFQVFKANA 77

Query: 55  RFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYK-MPTRNISNQSQSYANNWFGYPD 113
            F+++ N  G ++Y+L++NEFAD+T++EF+A +TG K +P          Y N      D
Sbjct: 78  DFVDRSNAAGGKSYELAINEFADMTNDEFVAMYTGLKPVPAGPKKMAGFKYENLTLSDVD 137

Query: 114 SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
            +     ++DWR +GAVT +KNQG CGCCW F+AVAAVE I +I TG L+SLSEQQVLDC
Sbjct: 138 QQ-----AVDWRQKGAVTGIKNQGQCGCCWAFAAVAAVESIHQITTGNLVSLSEQQVLDC 192

Query: 174 --SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP 231
              G+ GC GG++D+AF YII + GL  E  YPY   +G C  Q     A  I SYQDVP
Sbjct: 193 DTDGNNGCNGGYIDNAFQYIISNGGLATEDAYPYAAAQGTC--QSSVQPAVTISSYQDVP 250

Query: 232 T-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVF-AGPCGN-NLNHAVTIVGYGSSNEG 288
           +  E AL  AV+ QPV+VAIDA +  F++YS GV  A  CG  +LNHAVT VGY ++ +G
Sbjct: 251 SGDEAALAAAVANQPVAVAIDAHN-NFQFYSSGVLTADTCGTPSLNHAVTAVGYSTAEDG 309

Query: 289 -PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
            PYWL+KN WGQNWGEGG++R+ R   G   CG+A++ASYP+A
Sbjct: 310 TPYWLLKNQWGQNWGEGGYLRVER---GTNACGVAQQASYPVA 349


>gi|146215980|gb|ABQ10192.1| actinidin Act2a [Actinidia deliciosa]
          Length = 378

 Score =  311 bits (798), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 153/333 (45%), Positives = 212/333 (63%), Gaps = 14/333 (4%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L+I+ +   +  S     D + A +E W+ +  ++Y +  EK MRF+IFK+N R I+  N
Sbjct: 18  LLILSSAIDIENSVQRTNDQVMAMYESWLVEHGKSYNSLDEKEMRFEIFKENLRIIDDHN 77

Query: 62  REGNQTYKLSLNEFADLTDEEFIASHTGYKM-PTRNISNQSQSYANNWFGYPDSRRGLPR 120
            + N++Y L LN FADLTDEE+ +++ G K  P  ++SNQ           P     LP 
Sbjct: 78  ADANRSYSLGLNRFADLTDEEYRSTYLGLKRGPKTDVSNQYM---------PKVGDALPD 128

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---R 177
            +DWR  GAV  VKNQG C  CW FSAVAAVEGI KI TG LISLSEQ+++DC  +   +
Sbjct: 129 YVDWRTVGAVVGVKNQGLCSSCWAFSAVAAVEGINKIVTGNLISLSEQELVDCGRTQITK 188

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELA 236
           GC  G M DAF +II + G+  E  YPY  ++G CN      K   I SY++VP++ E+A
Sbjct: 189 GCNRGLMTDAFKFIINNGGINTENNYPYTAKDGQCNLSLKNQKYVTIDSYKNVPSNNEMA 248

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNS 296
           L+ AV+ QPVSV +++    F+ Y+ G+F G CG  ++H VTIVGYG+     YW++KNS
Sbjct: 249 LKKAVAYQPVSVGVESEGGKFKLYTSGIFTGSCGTAVDHGVTIVGYGTERGMDYWIVKNS 308

Query: 297 WGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           WG NWGE G+IR++R++GGAG CGIA+  SYP+
Sbjct: 309 WGTNWGESGYIRIQRNIGGAGKCGIAKMPSYPV 341


>gi|28192373|gb|AAK07730.1| CPR1-like cysteine proteinase [Nicotiana tabacum]
          Length = 374

 Score =  311 bits (798), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 151/314 (48%), Positives = 206/314 (65%), Gaps = 6/314 (1%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           ED +  ++E+W+A+  R Y    EK  RF+IFK N RFIE+ N  GN+TYK+ LN+FADL
Sbjct: 43  EDQVKNRYEMWLAEHGRAYNALGEKEKRFEIFKDNLRFIEEHNNSGNRTYKVGLNQFADL 102

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
           T+EE+   + G K   R    +S++ +  +   P+    +P S+DWR RGAV P+KNQGS
Sbjct: 103 TNEEYRTMYLGTKSDARRRFVKSKNPSQRYASRPNEL--MPHSVDWRKRGAVAPIKNQGS 160

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYIIRSQG 196
           CG CW FS VAAV GI +I TG +I+LSEQ+++DC    + GC GG MD AF +II + G
Sbjct: 161 CGSCWAFSTVAAVGGINQIVTGEMITLSEQELVDCDRVQNSGCNGGLMDYAFEFIISNGG 220

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPG 256
           +  E+ YPY+  EG C+  R   K   I  Y+DVP +E AL+ AV+ QPV VAI+AS   
Sbjct: 221 MDTEKHYPYRGVEGRCDPVRKNYKVVSIDGYEDVPRNERALQKAVAHQPVCVAIEASGRA 280

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA 316
           F+ YS GVF G CG  ++H V +VGYGS +   YW+++NSWG  WGE G+++M R+V  +
Sbjct: 281 FQLYSSGVFTGECGEEVDHGVVVVGYGSEDGVDYWIVRNSWGTKWGENGYVKMERNVKKS 340

Query: 317 --GLCGIARKASYP 328
             G CGI  +ASYP
Sbjct: 341 HLGKCGIMTEASYP 354


>gi|413933049|gb|AFW67600.1| cysteine protease 1 [Zea mays]
          Length = 341

 Score =  311 bits (798), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 161/311 (51%), Positives = 214/311 (68%), Gaps = 10/311 (3%)

Query: 24  AKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEF 83
           ++HE WMA+  R YK++AEKA R ++F+ N   I+ FN  G  +++L+ N FADLT EEF
Sbjct: 36  SRHEKWMAEHGRAYKDEAEKARRLEVFRANAELIDSFNAAGTHSHRLATNRFADLTVEEF 95

Query: 84  IASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCW 143
            A+ TG + P    S  +  +    F   D+     +S+DWRA GAVT VK+QG+CGCCW
Sbjct: 96  RAARTGLR-PRPAPSAGAGRFRYENFSLADA----AQSVDWRAMGAVTGVKDQGACGCCW 150

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---RGCYGGWMDDAFSYIIRSQGLTDE 200
            FSAVAAVEG+ KIRTGRL+SLSEQ+++DC  S   +GC GG MD+AF ++ R  GL  E
Sbjct: 151 AFSAVAAVEGLNKIRTGRLVSLSEQELVDCDVSGVDQGCDGGLMDNAFQFVARRGGLASE 210

Query: 201 RVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRY 259
             YPYQ R+G C     A +AA IR ++DVP  +E AL  AV+ QPVSVAI+     FR+
Sbjct: 211 SGYPYQGRDGPCRSSAAAARAASIRGHEDVPRNNEAALAAAVANQPVSVAINGEDMAFRF 270

Query: 260 YSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRDVGGAGL 318
           Y  GV  G CG +LNHA+T VGYG++N+G  YWL+KNSWG +WGEGG++R+RR V G G+
Sbjct: 271 YDSGVLGGACGTDLNHAITAVGYGTANDGTRYWLMKNSWGASWGEGGYVRIRRGVRGEGV 330

Query: 319 CGIARKASYPI 329
           CG+A+  SYP+
Sbjct: 331 CGLAKLPSYPV 341


>gi|242038089|ref|XP_002466439.1| hypothetical protein SORBIDRAFT_01g007820 [Sorghum bicolor]
 gi|241920293|gb|EER93437.1| hypothetical protein SORBIDRAFT_01g007820 [Sorghum bicolor]
          Length = 353

 Score =  311 bits (798), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 161/315 (51%), Positives = 212/315 (67%), Gaps = 11/315 (3%)

Query: 22  ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDE 81
           + ++HE WMA+  RTY ++AEKA R +IF+ N  FI+ FN  G  +++L+ N FADLTDE
Sbjct: 43  MVSRHEKWMAEHGRTYTDEAEKARRLEIFRANAEFIDSFNDAGKHSHRLATNRFADLTDE 102

Query: 82  EFIASHTGYKMPTRNISNQSQSYANNW--FGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
           EF A+ TG++      +         +  F   D+     +S+DWRA GAVT VK+QG C
Sbjct: 103 EFRAARTGFRPRPAPAAAAGSGGRFRYENFSLADA----AQSVDWRAMGAVTGVKDQGEC 158

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQG 196
           GCCW FSAVAAVEG+ KIRTGRL+SLSEQ+++DC      +GC GG MDDAF +I R  G
Sbjct: 159 GCCWAFSAVAAVEGLNKIRTGRLVSLSEQELVDCDVNGEDQGCEGGLMDDAFQFIERRGG 218

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSP 255
           L  E  YPYQ  +G C     A +AA IR ++DVP  +E AL  AV+ QPVSVAI+    
Sbjct: 219 LASESGYPYQGDDGSCRSSAAAARAASIRGHEDVPRNNEAALAAAVANQPVSVAINGEDY 278

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVG 314
            FR+Y  GV  G CG +LNHA+T VGYG++ +G  YWL+KNSWG +WGEGG++R+RR V 
Sbjct: 279 AFRFYDSGVLGGECGTDLNHAITAVGYGTAADGSKYWLMKNSWGTSWGEGGYVRIRRGVR 338

Query: 315 GAGLCGIARKASYPI 329
           G G+CG+A+  SYP+
Sbjct: 339 GEGVCGLAKLPSYPV 353


>gi|356515038|ref|XP_003526208.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 339

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 156/333 (46%), Positives = 216/333 (64%), Gaps = 12/333 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           + +I+  W   VMSR L E   S +HE WMAQ  + Y + AEK  RF+IFK N +FIE F
Sbjct: 12  LFLILTVWTFHVMSRRLSEVCTSERHEKWMAQYGKLYTDAAEKEKRFQIFKNNVQFIESF 71

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N  G++ + LS+N+FADL +EEF AS    +     +   +++     F Y +S   +P 
Sbjct: 72  NAAGDKPFNLSINQFADLHNEEFKASLINVQKKESGVETATETS----FRY-ESITKIPV 126

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRG 178
           ++DWR RGAVTP+K+QG+CG CW FS VAA+EGI +I TG+L+SLSEQ+++DC    S G
Sbjct: 127 TMDWRKRGAVTPIKDQGNCGSCWAFSIVAAIEGIHQITTGKLVSLSEQELVDCVKGKSEG 186

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELAL 237
           C  G+ ++AF ++ ++ GL  E  YPY+     C  ++     A+I+ Y++VP+ SE AL
Sbjct: 187 CNFGYKEEAFEFVAKNGGLASEISYPYKANNKTCMVKKETQGVAQIKGYENVPSNSEKAL 246

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNS 296
             AV+ QPVSV IDA +   ++YS G+F G CG   NHA T++GYG +  G  YWL+KNS
Sbjct: 247 LKAVANQPVSVYIDAGA--LQFYSSGIFTGKCGTAPNHAATVIGYGKARGGAKYWLVKNS 304

Query: 297 WGQNWGEGGFIRMRRDV-GGAGLCGIARKASYP 328
           WG  WGE G+IRM+RD+    GLCGIA  ASYP
Sbjct: 305 WGTKWGEKGYIRMKRDIRAKEGLCGIATNASYP 337


>gi|302143416|emb|CBI21977.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score =  311 bits (797), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 161/307 (52%), Positives = 212/307 (69%), Gaps = 16/307 (5%)

Query: 30  MAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTG 89
           MA+  R YK+  EK  RFKIFK N   IE FN+  ++TYKLS+NEFADLT+EEF +    
Sbjct: 1   MARYGRMYKDANEKEKRFKIFKDNVARIESFNKAMDKTYKLSINEFADLTNEEFRSLRNR 60

Query: 90  YKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVA 149
           +K    +I +++ +     F Y ++   +P +IDWR +GAVTP+K+Q  CGCCW FSAVA
Sbjct: 61  FKA---HICSEATT-----FKY-ENVTAVPSTIDWRKKGAVTPIKDQQQCGCCWAFSAVA 111

Query: 150 AVEGITKIRTGRLISLSEQQVLDCSG---SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQ 206
           A EGIT+I TG+LISLSEQ+++DC     ++GC GG MDDAF + I+  GL  E  YPY+
Sbjct: 112 ATEGITQITTGKLISLSEQELVDCDTGGENQGCSGGLMDDAFRF-IKIHGLASEATYPYE 170

Query: 207 RREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVF 265
             +G CN ++ A  AA+I+ Y+DVP  +E AL+ AV+ QPV+VAIDA    F++Y+ GVF
Sbjct: 171 GDDGTCNSKKEAHPAAKIKGYEDVPANNEKALQKAVAHQPVAVAIDAGGFEFQFYTSGVF 230

Query: 266 AGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDV-GGAGLCGIAR 323
            G CG  L+H V  VGYG  ++G  YWL+KNSWG  WGE G+IRM+RDV    GLCGIA 
Sbjct: 231 TGQCGTELDHGVAAVGYGIGDDGMMYWLVKNSWGTGWGEEGYIRMQRDVTAKEGLCGIAM 290

Query: 324 KASYPIA 330
           +ASYP A
Sbjct: 291 QASYPTA 297


>gi|356543122|ref|XP_003540012.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
          Length = 342

 Score =  311 bits (796), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 160/328 (48%), Positives = 211/328 (64%), Gaps = 14/328 (4%)

Query: 10  SLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYK 69
           S V SR LH+ S+  +HE WM +  + YK+ AE   RF IF+ N  FIE FN  GN+ YK
Sbjct: 22  SQVKSRKLHDASMYERHEQWMEKYGKVYKDSAEXEKRFLIFENNVEFIESFNAAGNKPYK 81

Query: 70  LSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPDSRRGLPRSIDWRA 126
           LS+N  AD T+EEF+ASH GYK        I+ Q+       F Y ++   +P ++DWR 
Sbjct: 82  LSINHLADQTNEEFMASHKGYKGSHWQGLRITTQTP------FKY-ENVTDIPWAVDWRQ 134

Query: 127 RGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMD 185
           +G  T +K+QG CG CW FSAVAA EGI +I TG L+SLSEQ+++DC S   GC GG M+
Sbjct: 135 KGDATSIKDQGQCGICWAFSAVAATEGIYQITTGNLVSLSEQELVDCDSVDHGCDGGLME 194

Query: 186 DAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQ 244
             F +II++ G++ E  YPY    G C+  + A   A+I+ Y+ VP + E  L+ AV+ Q
Sbjct: 195 HGFEFIIKNGGISSEANYPYTAVNGTCDTNKEASPGAQIKGYETVPVNCEEELQKAVANQ 254

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGE 303
           PVSV+IDA    F++YS GVF G CG  L+H VT VGYGS+++G  YW++KNSWG  WGE
Sbjct: 255 PVSVSIDAGGSAFQFYSSGVFTGQCGTQLDHGVTAVGYGSTDDGIQYWIVKNSWGTQWGE 314

Query: 304 GGFIRMRRDVGG-AGLCGIARKASYPIA 330
            G+IRM R +    GLCGIA  ASYP A
Sbjct: 315 EGYIRMLRGIDAQEGLCGIAMDASYPTA 342


>gi|297794671|ref|XP_002865220.1| senescence-associated gene 12 [Arabidopsis lyrata subsp. lyrata]
 gi|297311055|gb|EFH41479.1| senescence-associated gene 12 [Arabidopsis lyrata subsp. lyrata]
          Length = 346

 Score =  311 bits (796), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 161/328 (49%), Positives = 219/328 (66%), Gaps = 9/328 (2%)

Query: 8   WASLVMSRTLHEDSISAK-HELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNR-EGN 65
           + S+ +SR L  + I  K H  WM +  R Y +  EK+ R+ +FK N   IE  N     
Sbjct: 19  YFSISLSRPLDNELIMQKRHIEWMTKHGRVYADVKEKSNRYVVFKSNVERIEHLNNIPAG 78

Query: 66  QTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG-LPRSIDW 124
           +T+KL++N+FADLT++EF + +TG+K    ++S+QSQ+   + F Y +   G LP S+DW
Sbjct: 79  RTFKLAVNQFADLTNDEFRSMYTGFK-GVSSLSSQSQTKTTS-FRYQNVSSGALPISVDW 136

Query: 125 RARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGW 183
           R +GAVTP+KNQGSCGCCW FSAVAA+EG T+I+ G+LISLSEQQ++DC +   GC GG 
Sbjct: 137 RTKGAVTPIKNQGSCGCCWAFSAVAAIEGATQIKKGKLISLSEQQLVDCDTNDFGCEGGL 196

Query: 184 MDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVS 242
           MD AF +I+ + GLT E  YPY+  +  CN ++   KA  I  Y+DVP + E AL  AV+
Sbjct: 197 MDTAFEHIMATGGLTTESNYPYKGEDATCNSKKTNPKATSITGYEDVPVNDEQALMKAVA 256

Query: 243 RQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNW 301
            QPVSV I+     F++YS GVF G C   L+HAVT +GYG S  G  YW+IKNSWG  W
Sbjct: 257 HQPVSVGIEGGGFDFQFYSSGVFTGECTTYLDHAVTAIGYGQSTNGSKYWIIKNSWGTKW 316

Query: 302 GEGGFIRMRRDVGGA-GLCGIARKASYP 328
           GE G++R+++D+    GLCG+A KASYP
Sbjct: 317 GESGYMRIQKDIKDKQGLCGLAMKASYP 344


>gi|146215982|gb|ABQ10193.1| actinidin Act2b [Actinidia eriantha]
          Length = 378

 Score =  311 bits (796), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 152/333 (45%), Positives = 211/333 (63%), Gaps = 14/333 (4%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L+I+     +  S     D + A +E W+ +  ++Y +  EK MRF+IFK+N R I+  N
Sbjct: 18  LLILSLALDIENSVQRTNDQVMAMYESWLVEQGKSYNSLDEKEMRFEIFKENLRIIDDHN 77

Query: 62  REGNQTYKLSLNEFADLTDEEFIASHTGYKM-PTRNISNQSQSYANNWFGYPDSRRGLPR 120
            + N++Y L LN FADLTDEE+ +++ G KM P  ++SN+           P     LP 
Sbjct: 78  ADANRSYSLGLNRFADLTDEEYRSTYLGLKMGPKTDVSNEYM---------PKVGEALPD 128

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSR 177
            +DWR  GAV  VKNQG C  CW FSAV AVEGI KI TG LISLSEQ+++DC     ++
Sbjct: 129 YVDWRTVGAVVGVKNQGLCSSCWAFSAVTAVEGINKIVTGNLISLSEQELVDCGRTQRTK 188

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELA 236
           GC  G M DAF +II + G+  E  YPY  ++G CN      K   I +Y++VP++ E+A
Sbjct: 189 GCNRGLMTDAFQFIINNGGINTEDNYPYTAKDGQCNLSLKNQKYVTIDNYKNVPSNNEMA 248

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNS 296
           L+ AV+ QPVSV +++    F+ Y+ G+F G CG  ++H VTIVGYG+     YW++KNS
Sbjct: 249 LKKAVAYQPVSVGVESEGGKFKLYTSGIFTGFCGTAVDHGVTIVGYGTERGMDYWIVKNS 308

Query: 297 WGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           WG NWGE G+IR++R++GGAG CGIAR  SYP+
Sbjct: 309 WGTNWGENGYIRIQRNIGGAGKCGIARMPSYPV 341


>gi|356545116|ref|XP_003540991.1| PREDICTED: vignain-like [Glycine max]
          Length = 342

 Score =  310 bits (795), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 154/335 (45%), Positives = 214/335 (63%), Gaps = 10/335 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           + +++  W S VMSR L E   S KHE WMAQ  + YK+ AEK  RF+IFK N  FIE F
Sbjct: 13  VFLVLTVWTSQVMSRRLSEAYSSVKHEKWMAQYGKVYKDAAEKEKRFQIFKNNVHFIESF 72

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           +  G++ + LS+N+FADL   +F A     +    N+   + + A+  F Y DS   +P 
Sbjct: 73  HAAGDKPFNLSINQFADL--HKFKALLINGQKKEHNVRTATATEAS--FKY-DSVTRIPS 127

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRG 178
           S+DWR RGAVTP+K+QG+C  CW FS VA +EG+ +I  G L+SLSEQ+++DC    S G
Sbjct: 128 SLDWRKRGAVTPIKDQGTCRSCWAFSTVATIEGLHQITKGELVSLSEQELVDCVKGDSEG 187

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELAL 237
           CYGG+++DAF +I +  G+  E  YPY+     C  ++      +I+ Y+ VP+ SE AL
Sbjct: 188 CYGGYVEDAFEFIAKKGGVASETHYPYKGVNKTCKVKKETHGVVQIKGYEQVPSNSEKAL 247

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNS 296
             AV+ QPVS  ++A    F++YS G+F G CG +++H+VT+VGYG +  G  YWL+KNS
Sbjct: 248 LKAVAHQPVSAYVEAGGYAFQFYSSGIFTGKCGTDIDHSVTVVGYGKARGGNKYWLVKNS 307

Query: 297 WGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPIA 330
           WG  WGE G+IRM+RD+    GLCGIA  A YP A
Sbjct: 308 WGTEWGEKGYIRMKRDIRAKEGLCGIATGALYPTA 342


>gi|18396939|ref|NP_564320.1| Papain family cysteine protease [Arabidopsis thaliana]
 gi|9502427|gb|AAF88126.1|AC021043_19 Putative cysteine proteinase [Arabidopsis thaliana]
 gi|67633400|gb|AAY78625.1| peptidase C1A papain family protein [Arabidopsis thaliana]
 gi|332192919|gb|AEE31040.1| Papain family cysteine protease [Arabidopsis thaliana]
          Length = 346

 Score =  310 bits (795), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 167/320 (52%), Positives = 220/320 (68%), Gaps = 17/320 (5%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTD 80
           SI   H+ WM Q +R Y ++ EK +R ++  +N +FIE FN  GNQ+YKL +NEF D T 
Sbjct: 34  SIVDYHQQWMIQFSRVYDDEFEKQLRLQVLTENLKFIESFNNMGNQSYKLGVNEFTDWTK 93

Query: 81  EEFIASHTGYK----MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQ 136
           EEF+A++TG +         + N+++  A NW         L  + DWR  GAVTPVK+Q
Sbjct: 94  EEFLATYTGLRGVNVTSPFEVVNETKP-AWNW----TVSDVLGTNKDWRNEGAVTPVKSQ 148

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYIIRS 194
           G CG CW FSA+AAVEG+TKI  G LISLSEQQ+LDC+   + GC GG   +AF+YII+ 
Sbjct: 149 GECGGCWAFSAIAAVEGLTKIARGNLISLSEQQLLDCTREQNNGCKGGTFVNAFNYIIKH 208

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDAS 253
           +G++ E  YPYQ +EG C  +  A  A  IR +++VP+ +E AL  AVSRQPV+VAIDAS
Sbjct: 209 RGISSENEYPYQVKEGPC--RSNARPAILIRGFENVPSNNERALLEAVSRQPVAVAIDAS 266

Query: 254 SPGFRYYSGGVF-AGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRR 311
             GF +YSGGV+ A  CG ++NHAVT+VGYG+S EG  YWL KNSWG+ WGE G+IR+RR
Sbjct: 267 EAGFVHYSGGVYNARNCGTSVNHAVTLVGYGTSPEGMKYWLAKNSWGKTWGENGYIRIRR 326

Query: 312 DVG-GAGLCGIARKASYPIA 330
           DV    G+CG+A+ ASYP+A
Sbjct: 327 DVEWPQGMCGVAQYASYPVA 346


>gi|414587996|tpg|DAA38567.1| TPA: hypothetical protein ZEAMMB73_390779 [Zea mays]
          Length = 343

 Score =  310 bits (795), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 153/325 (47%), Positives = 208/325 (64%), Gaps = 15/325 (4%)

Query: 11  LVMSRTLHEDS-ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYK 69
           ++ +R L +D+ ++ +HE WMA   R YK+ AEKA RF++FK N  F+E FN +    + 
Sbjct: 25  VLAARELSDDAAMAERHERWMAVYGRVYKDAAEKARRFEVFKDNLAFVESFNADKKNKFW 84

Query: 70  LSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGA 129
           L +N+FADLT EEF A+     +    +      Y N       S   LP ++DWR +GA
Sbjct: 85  LGVNQFADLTTEEFKANKGFKPISAEEVPTTGFKYENL------SVSALPTAVDWRTKGA 138

Query: 130 VTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSRGCYGGWMDD 186
           VTP+KNQG CGCCW FSAVAA+EGI K+ T  L+SLSEQ+++DC   S   GC GGWMD 
Sbjct: 139 VTPIKNQGQCGCCWAFSAVAAMEGIVKLSTDNLVSLSEQELVDCDTHSMDEGCEGGWMDS 198

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQP 245
           AF ++I++ GL  E  YPY+  +G C  + G+  AA I+ ++DV P +E AL  AV+ QP
Sbjct: 199 AFEFVIKNGGLATESSYPYKAVDGKC--KGGSKSAATIKGHEDVPPNNEAALMKAVASQP 256

Query: 246 VSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEG 304
           VSVA+DAS   F  YSGGV  G CG  L+H +  +GYG  ++G  YW++KNSWG  WGE 
Sbjct: 257 VSVAVDASDRTFMLYSGGVMTGSCGTQLDHGIAAIGYGVESDGTKYWILKNSWGTTWGEK 316

Query: 305 GFIRMRRDVGGA-GLCGIARKASYP 328
            F+RM +D+    G+CG+A K SYP
Sbjct: 317 RFLRMEKDISDKQGMCGLAMKPSYP 341


>gi|125547256|gb|EAY93078.1| hypothetical protein OsI_14879 [Oryza sativa Indica Group]
          Length = 339

 Score =  310 bits (795), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 159/319 (49%), Positives = 209/319 (65%), Gaps = 20/319 (6%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTD 80
           ++ A+HE WM Q  R YK+  EKA RF+IFK N  FIE FN  GN  + L +N+FADLT+
Sbjct: 32  AMVARHERWMEQYGRVYKDATEKARRFEIFKANVAFIESFN-AGNHKFWLGVNQFADLTN 90

Query: 81  EEFIASHT--GYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRARGAVTPVKNQG 137
            EF A+ T  G+   T  +           F Y + S   LP ++DWR +GAVTP+K+QG
Sbjct: 91  YEFRATKTNKGFIPSTVRVPTT--------FRYENVSIDTLPATVDWRTKGAVTPIKDQG 142

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRS 194
            CGCCW FSAVAA+EGI K+ TG+LISLSEQ+++DC      +GC GG MDDAF +II++
Sbjct: 143 QCGCCWAFSAVAAMEGIVKLSTGKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKN 202

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDAS 253
            GLT E  YPY   +G CN   G+  AA I+ Y++VP  +E AL  AV+ QPVSVA+D  
Sbjct: 203 GGLTTESKYPYTAADGKCN--GGSNSAATIKGYEEVPANNEAALMKAVANQPVSVAVDGG 260

Query: 254 SPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRD 312
              F++YSGGV  G CG +L+H +  +GYG   +G  YWL+KNSWG  WGE GF+RM +D
Sbjct: 261 DMTFQFYSGGVMTGSCGTDLDHGIVAIGYGKDGDGTQYWLLKNSWGTTWGENGFLRMEKD 320

Query: 313 VGGA-GLCGIARKASYPIA 330
           +    G+CG+A + SYP A
Sbjct: 321 ISDKRGMCGLAMEPSYPTA 339


>gi|310656789|gb|ADP02218.1| Peptidase_C1 domain-containing protein [Triticum aestivum]
          Length = 341

 Score =  310 bits (793), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 155/334 (46%), Positives = 218/334 (65%), Gaps = 18/334 (5%)

Query: 4   IMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE 63
           I +  ++++ +R L + ++  +HE WMA+  R YK+  EKA RF++FK N  FIE FN E
Sbjct: 15  ICLCSSAVLSARELGDTAMVERHEQWMAKFNRVYKDGTEKAQRFEVFKANVAFIESFNAE 74

Query: 64  GNQTYKLSLNEFADLTDEEFIASHT--GYKMPTRNISNQSQSYANNWFGYPD-SRRGLPR 120
            N+ + L +N+F DLT++EF A+ T  G KM        S   A   F Y + S   LP 
Sbjct: 75  -NRKFWLGVNQFTDLTNDEFRATKTNKGLKM--------SGGRAPTGFKYSNVSIDALPT 125

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSR 177
           ++DWR +G VTP+K+QG CGCCW FSAV A EGI K+ TG+LISLSEQ+++DC      +
Sbjct: 126 AVDWRTKGVVTPIKDQGQCGCCWAFSAVVATEGIVKLSTGKLISLSEQELVDCDVHGVDQ 185

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELA 236
           GC GG MDDAF +II++ GLT E  YPY  ++G C     +   A I+ Y+DVP + E +
Sbjct: 186 GCEGGEMDDAFKFIIKNGGLTTEANYPYTAQDGQCKTSIASNSVATIKGYEDVPANDESS 245

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKN 295
           L  AV+ QPVSVA+D     F++YSGGV  G CG +L+H +  +GYG +++G  YWL+KN
Sbjct: 246 LMKAVANQPVSVAVDGGDVIFQHYSGGVMTGSCGTDLDHGIAAIGYGMTSDGTKYWLLKN 305

Query: 296 SWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           SWG  WGE G++RM +D+   +G+CG+A + SYP
Sbjct: 306 SWGTTWGESGYLRMEKDISDKSGMCGLAMQPSYP 339


>gi|356543118|ref|XP_003540010.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
          Length = 339

 Score =  309 bits (792), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 159/336 (47%), Positives = 212/336 (63%), Gaps = 15/336 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDS--ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIE 58
           +++++    S VMSR LHE S  +S +HE W  +  + YK+ AEK  R  IFK N  FIE
Sbjct: 13  LVLLLPICISQVMSRNLHEASXCMSERHEQWTKKYGKVYKDAAEKQKRLLIFKDNVEFIE 72

Query: 59  KFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL 118
            FN  GN+ YKLS+N   D T+EEF+ASH GYK           S++   F Y ++  G+
Sbjct: 73  SFNAAGNKPYKLSINHLTDQTNEEFVASHNGYK--------HKGSHSQTPFKY-ENITGV 123

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSR 177
           P ++DWR  GAV  +K+QG CG CW FS VA  EGI +I T  L+SLSEQ+++DC S   
Sbjct: 124 PNAVDWRENGAVXAMKDQGQCGNCWAFSTVATTEGIYQITTSMLMSLSEQELVDCDSVDH 183

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELA 236
           GC GG+M+  F +I ++ G++ E  YPY   +G  +  + A  AA+I+ Y+ VP  SE A
Sbjct: 184 GCDGGYMEGGFEFIXKNGGISSEANYPYTAVDGTYDANKEASPAAQIKGYETVPANSEDA 243

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKN 295
           L+ AV+ QPVSV ID     F++ S GVF G CG  L+H VT VGYGS+++G  YW++KN
Sbjct: 244 LQKAVANQPVSVTIDVGGSAFQFNSSGVFTGQCGTQLDHGVTAVGYGSTDDGTQYWIVKN 303

Query: 296 SWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           SWG  WGE G+IRM+R      GLCGIA  ASYP A
Sbjct: 304 SWGTQWGEEGYIRMQRGTDAQEGLCGIAMDASYPTA 339


>gi|38345008|emb|CAD40026.2| OSJNBa0052O21.11 [Oryza sativa Japonica Group]
 gi|125589414|gb|EAZ29764.1| hypothetical protein OsJ_13822 [Oryza sativa Japonica Group]
          Length = 339

 Score =  309 bits (792), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 156/340 (45%), Positives = 222/340 (65%), Gaps = 21/340 (6%)

Query: 1   MLIIMVTWASLVMSRTLHEDS-ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           +L  +   ++++ +R L +D+ ++A+HE WMAQ  R Y++ AEKA RF++FK N  FIE 
Sbjct: 11  ILGCLCLCSAVLAARELSDDAAMAARHERWMAQYGRVYRDDAEKARRFEVFKANVAFIES 70

Query: 60  FNREGNQTYKLSLNEFADLTDEEF--IASHTGYKMPTRNISNQSQSYANNWFGYPDSR-R 116
           FN  GN  + L +N+FADLT++EF  + ++ G+   T  +           F Y +    
Sbjct: 71  FN-AGNHNFWLGVNQFADLTNDEFRWMKTNKGFIPSTTRVPTG--------FRYENVNID 121

Query: 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-- 174
            LP ++DWR +GAVTP+K+QG CGCCW FSAVAA+EGI K+ TG+LISLSEQ+++DC   
Sbjct: 122 ALPATVDWRTKGAVTPIKDQGQCGCCWAFSAVAAMEGIVKLSTGKLISLSEQELVDCDVH 181

Query: 175 -GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT- 232
              +GC GG MDDAF +II++ GLT E  YPY   +  C  +  +   A I+ Y+DVP  
Sbjct: 182 GEDQGCEGGLMDDAFKFIIKNGGLTTESNYPYAAADDKC--KSVSNSVASIKGYEDVPAN 239

Query: 233 SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YW 291
           +E AL  AV+ QPVSVA+D     F++Y GGV  G CG +L+H +  +GYG +++G  YW
Sbjct: 240 NEAALMKAVANQPVSVAVDGGDMTFQFYKGGVMTGSCGTDLDHGIVAIGYGKASDGTKYW 299

Query: 292 LIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
           L+KNSWG  WGE GF+RM +D+    G+CG+A + SYP A
Sbjct: 300 LLKNSWGTTWGENGFLRMEKDISDKRGMCGLAMEPSYPTA 339


>gi|18408828|ref|NP_566920.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|12324451|gb|AAG52191.1|AC012329_18 putative cysteine proteinase; 15366-14136 [Arabidopsis thaliana]
 gi|6723404|emb|CAB66413.1| cysteine protease-like protein [Arabidopsis thaliana]
 gi|332645009|gb|AEE78530.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 341

 Score =  309 bits (792), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 172/343 (50%), Positives = 214/343 (62%), Gaps = 20/343 (5%)

Query: 3   IIMVTWASLVMSRT--------LHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNF 54
           I+    A L+ SRT        L E S   KHE WM++  R Y + +EK  RF+IF  N 
Sbjct: 4   IVFFLLAILLSSRTSGVTSRGGLFEASAVEKHEQWMSRFNRVYSDDSEKTSRFEIFTNNL 63

Query: 55  RFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMP---TRNISNQSQSYANNWFGY 111
           +F+E  N   N+TY L +NEF+DLTDEEF A +TG  +P   TR  +  S    +  F Y
Sbjct: 64  KFVESINMNTNKTYTLDVNEFSDLTDEEFKARYTGLVVPEGMTRISTTDSHETVS--FRY 121

Query: 112 PDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVL 171
            +       S+DW   GAVT VK+Q  CGCCW FSAVAAVEG+TKI  G L+SLSEQQ+L
Sbjct: 122 ENVGE-TGESMDWIQEGAVTSVKHQQQCGCCWAFSAVAAVEGMTKIANGELVSLSEQQLL 180

Query: 172 DCSG-SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV 230
           DCS  + GC GG M  AF YI  +QG+T E  YPYQ  +  C  +   + AA I  Y+ V
Sbjct: 181 DCSTENNGCGGGIMWKAFDYIKENQGITTEDNYPYQGAQQTC--ESNHLAAATISGYETV 238

Query: 231 P-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG- 288
           P   E AL  AVS+QPVSVAI+ S   F +YSGG+F G CG  L HAVTIVGYG S EG 
Sbjct: 239 PQNDEEALLKAVSQQPVSVAIEGSGYEFIHYSGGIFNGECGTQLTHAVTIVGYGVSEEGI 298

Query: 289 PYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
            YWL+KNSWG++WGE G++R+ RDV    G+CG+A  A YP+A
Sbjct: 299 KYWLLKNSWGESWGENGYMRIMRDVDSPQGMCGLASLAYYPVA 341


>gi|5823018|gb|AAD53011.1|AF089848_1 senescence-specific cysteine protease [Brassica napus]
          Length = 346

 Score =  309 bits (792), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 164/331 (49%), Positives = 217/331 (65%), Gaps = 19/331 (5%)

Query: 10  SLVMSRTLHEDSI-SAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNR-EGNQT 67
           S  +SR L ++ I   KH+ WMA+  RTY +  EK  R+ +FK+N   IE+ N     +T
Sbjct: 21  STTLSRLLDDELIMQKKHDEWMAEHGRTYADMNEKNNRYVVFKRNVERIERLNNVPAGRT 80

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQS------YANNWFGYPDSRRGLPRS 121
           +KL++N+FADLT++EF   +TGYK      S QSQ+      Y N +FG       LP +
Sbjct: 81  FKLAVNQFADLTNDEFRFMYTGYKGDFVLFS-QSQTKSTSFRYQNVFFG------ALPIA 133

Query: 122 IDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCY 180
           +DWR +GAVTP+KNQGSCGCCW FSAVAA+EG T+I+ G+LISLSEQQ++DC +   GC 
Sbjct: 134 VDWRKKGAVTPIKNQGSCGCCWAFSAVAAIEGATQIKKGKLISLSEQQLVDCDTNDFGCS 193

Query: 181 GGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRY 239
           GG MD AF +I+ + GLT E  YPY+  +  C  +     AA I  Y+DVP + E AL  
Sbjct: 194 GGLMDTAFEHIMATGGLTTESNYPYKGEDANCKIKSTKPSAASITGYEDVPVNDENALMK 253

Query: 240 AVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWG 298
           AV+ QPVSV I+     F++YS GVF G C   L+HAVT VGY  S+ G  YW+IKNSWG
Sbjct: 254 AVAHQPVSVGIEGGGFDFQFYSSGVFTGECTTYLDHAVTAVGYSQSSAGSKYWIIKNSWG 313

Query: 299 QNWGEGGFIRMRRDV-GGAGLCGIARKASYP 328
             WGEGG++R+++D+    GLCG+A KASYP
Sbjct: 314 TKWGEGGYMRIKKDIKDKEGLCGLAMKASYP 344


>gi|116309178|emb|CAH66275.1| OSIGBa0147O06.5 [Oryza sativa Indica Group]
          Length = 339

 Score =  309 bits (792), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 157/340 (46%), Positives = 221/340 (65%), Gaps = 21/340 (6%)

Query: 1   MLIIMVTWASLVMSRTLHEDS-ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           +L  +   ++++ +R L +D+ ++A+HE WMAQ  R YK+ AEKA RF++FK N  FIE 
Sbjct: 11  ILGCLCLCSAVLAARELSDDAAMAARHERWMAQYGRMYKDDAEKARRFEVFKANVAFIES 70

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHT--GYKMPTRNISNQSQSYANNWFGYPDSR-R 116
           FN  GN  + L +N+FADLT++EF ++ T  G+   T  +           F Y +    
Sbjct: 71  FN-AGNHKFWLGVNQFADLTNDEFRSTKTNKGFIPSTTRVPTG--------FRYENVNID 121

Query: 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-- 174
            LP ++DWR +G VTP+K+QG CGCCW FSAVAA+EGI K+ TG+LISLSEQ+++DC   
Sbjct: 122 ALPATMDWRTKGVVTPIKDQGQCGCCWAFSAVAAMEGIVKLSTGKLISLSEQELVDCDVH 181

Query: 175 -GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT- 232
              +GC GG MDDAF +II++ GLT E  YPY   +  C  +  +   A I+ Y+DVP  
Sbjct: 182 GEDQGCEGGLMDDAFKFIIKNGGLTTESNYPYAAADDKC--KSVSNSVASIKGYEDVPAN 239

Query: 233 SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YW 291
           +E AL  AV+ QPVSVA+D     F++Y GGV  G CG +L+H +  +GYG +++G  YW
Sbjct: 240 NEAALMKAVANQPVSVAVDGGDMTFQFYKGGVMTGSCGTDLDHGIVAIGYGKASDGTKYW 299

Query: 292 LIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
           L+KNSWG  WGE GF+RM +D+    G+CG+A + SYP A
Sbjct: 300 LLKNSWGTTWGENGFLRMEKDISDKRGMCGLAMEPSYPTA 339


>gi|312281697|dbj|BAJ33714.1| unnamed protein product [Thellungiella halophila]
          Length = 347

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 159/327 (48%), Positives = 220/327 (67%), Gaps = 10/327 (3%)

Query: 10  SLVMSRTLHEDSI--SAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNR-EGNQ 66
           S+ +SR L ++ +    +H+ WMA+  R Y +  EK  R+ +FK+N   IE+ N     +
Sbjct: 21  SITLSRPLDDNELIMQKRHDEWMAKHGRVYADMKEKNNRYVVFKRNVERIERLNNVPAGR 80

Query: 67  TYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG-LPRSIDWR 125
           T+KL++N+FADLT++EF + +TGYK  +  +S+QS +  ++ F Y +   G LP S+DWR
Sbjct: 81  TFKLAVNQFADLTNDEFRSMYTGYKGGSV-LSSQSGTKTSS-FRYQNVSSGALPVSVDWR 138

Query: 126 ARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWM 184
            +GAVTP+KNQG+CGCCW FSAVAA+EG TKI+ G+LISLSEQQ++DC +   GC GG M
Sbjct: 139 KKGAVTPIKNQGTCGCCWAFSAVAAIEGATKIKKGKLISLSEQQLVDCDTNDFGCSGGLM 198

Query: 185 DDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSR 243
           D AF +I+ + GLT E  YPY+ ++  C  +     A  I  Y+DVP + E AL  AV+ 
Sbjct: 199 DTAFEHIMATGGLTTESNYPYKGKDATCKIKNTKPTATSITGYEDVPVNDEKALMKAVAH 258

Query: 244 QPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYG-SSNEGPYWLIKNSWGQNWG 302
           QPVS+ I+     F++Y  GVF G C   L+HAVT VGYG SSN   YW+IKNSWG  WG
Sbjct: 259 QPVSIGIEGGGFDFQFYGSGVFTGECTTYLDHAVTAVGYGQSSNGSKYWIIKNSWGTKWG 318

Query: 303 EGGFIRMRRDV-GGAGLCGIARKASYP 328
           E G++R+++DV    GLCG+A KASYP
Sbjct: 319 ESGYMRIKKDVKDKKGLCGLAMKASYP 345


>gi|116787404|gb|ABK24495.1| unknown [Picea sitchensis]
 gi|224286306|gb|ACN40861.1| unknown [Picea sitchensis]
          Length = 452

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 161/326 (49%), Positives = 214/326 (65%), Gaps = 11/326 (3%)

Query: 10  SLVMSRTLHED-SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTY 68
           S++ S+ L ED +I   +ELW+A+  R Y    EK  RF +FK NF +I + N +GN++Y
Sbjct: 25  SIISSKDLREDDAIMELYELWLAEHKRAYNGLDEKQKRFSVFKDNFLYIHEHN-QGNRSY 83

Query: 69  KLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARG 128
           KL LN+FADL+ EEF A++ G K+ T+   ++  S     + Y D    LP SIDWR +G
Sbjct: 84  KLGLNQFADLSHEEFKATYLGAKLDTKKRLSRPPS---RRYQYSDGED-LPESIDWREKG 139

Query: 129 AVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDD 186
           AVT VK+QGSCG CW FS VAAVEGI +I TG LISLSEQ+++DC  S  +GC GG MD 
Sbjct: 140 AVTSVKDQGSCGSCWAFSTVAAVEGINQIVTGDLISLSEQELVDCDTSYNQGCNGGLMDY 199

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQP 245
           AF +II + GL  E  YPY   +G C+  R       I  Y+DVP   E +L+ A + QP
Sbjct: 200 AFEFIINNGGLDSEEDYPYTAYDGSCDSYRKNAHVVTIDDYEDVPENDEKSLKKAAANQP 259

Query: 246 VSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGG 305
           +SVAI+AS   F++Y  GVF   CG  L+H VT+VGYGS +   YW +KNSWG++WGE G
Sbjct: 260 ISVAIEASGREFQFYDSGVFTSTCGTQLDHGVTLVGYGSESGTDYWTVKNSWGKSWGEEG 319

Query: 306 FIRMRR--DVGGAGLCGIARKASYPI 329
           FIR++R  +V   G+CGIA +ASYP+
Sbjct: 320 FIRLQRNIEVASTGMCGIAMEASYPV 345


>gi|37780043|gb|AAP32194.1| cysteine protease 1 [Trifolium repens]
          Length = 292

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 155/298 (52%), Positives = 202/298 (67%), Gaps = 17/298 (5%)

Query: 42  EKAMRFKIFKKNFRFIEKFNRE-GNQTYKLSLNEFADLTDEEFIASHTGYK--MPTRNIS 98
           E+  R +IF KN  +IE  N    N+ YKLS+N+FADLT+EEFIAS   +K  M +  I 
Sbjct: 3   EREKRLRIFNKNVNYIEASNSAVNNKLYKLSINKFADLTNEEFIASRNKFKGHMCSSIIR 62

Query: 99  NQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIR 158
             +  Y N           +P ++DWR +GAVTPVKNQG CG CW FSAVAA EGI ++ 
Sbjct: 63  TTTFKYEN--------ASAIPSTVDWRKKGAVTPVKNQGQCGSCWAFSAVAATEGIHQLS 114

Query: 159 TGRLISLSEQQVLDCSG---SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQ 215
           TG+L+SLSEQ+++DC      +GC GG MDDAF +II++ GL+ E  YPY+  +G CN  
Sbjct: 115 TGKLVSLSEQELIDCDTKGVDQGCEGGLMDDAFKFIIQNHGLSTEVQYPYEGVDGTCNAN 174

Query: 216 RGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLN 274
           + ++ A  I  Y+DVP  +ELAL+ AV+ QP+SVAIDAS   F++Y+ GVF G CG  L+
Sbjct: 175 KASIHAVTITGYEDVPANNELALQKAVANQPISVAIDASGSDFQFYNSGVFTGSCGTELD 234

Query: 275 HAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
           H VT VGYG  N+G  YWL+KNSWG +WGE G+IRM+R +  A GLCGIA +ASYP A
Sbjct: 235 HGVTAVGYGVGNDGTKYWLVKNSWGADWGEEGYIRMQRGIAAAEGLCGIAMQASYPTA 292


>gi|357452869|ref|XP_003596711.1| Cysteine proteinase [Medicago truncatula]
 gi|355485759|gb|AES66962.1| Cysteine proteinase [Medicago truncatula]
          Length = 344

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 154/337 (45%), Positives = 220/337 (65%), Gaps = 14/337 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  I+  W SLV+S  L E     KHE WM +  + YK+ AEK  RF+IFK+N  FIE F
Sbjct: 15  LFFILTLWTSLVISSRLLE-----KHEQWMEEHGKFYKDAAEKEQRFQIFKENLEFIESF 69

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASH-TGYKMPTRNISNQSQSYANNWFGYPDSRRGLP 119
           N  G+  + LS+N+F D T++EF A++  G K P   +   +     + F Y +    +P
Sbjct: 70  NAAGDNGFNLSINQFGDQTNDEFKANYLNGKKKPLIGVGIAAIE-EESVFRYENVTE-VP 127

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGS 176
            ++DWR RGAVTP+K+Q  CG CW F+ VAA+EGI +I TGRL+SLSEQ+++DC   + +
Sbjct: 128 ATMDWRERGAVTPIKHQHLCGSCWAFATVAAIEGIHQITTGRLVSLSEQELVDCVKTNTT 187

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSEL 235
            GC GG+++DA  +I++  G+T E  YPY R +G CN ++G    A+I+ Y+ VP  +E 
Sbjct: 188 DGCNGGYVEDACDFIVKKGGITSETNYPYTRVDGKCNVRKGTYNVAKIKGYEHVPANNEK 247

Query: 236 ALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIK 294
           AL  AV+ QP++V I A+   F++YS G+  G CG +L+H VTIVGYG+S++G  YWL+K
Sbjct: 248 ALLKAVANQPIAVYIAATKRAFQFYSSGILKGKCGIDLDHTVTIVGYGTSDDGVKYWLVK 307

Query: 295 NSWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPIA 330
           NSWG  WGE G+I+++RDV    G CGIA   +YPI 
Sbjct: 308 NSWGTKWGEKGYIKIKRDVHAKEGSCGIAMVPTYPIV 344


>gi|125547236|gb|EAY93058.1| hypothetical protein OsI_14861 [Oryza sativa Indica Group]
          Length = 339

 Score =  308 bits (790), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 156/340 (45%), Positives = 221/340 (65%), Gaps = 21/340 (6%)

Query: 1   MLIIMVTWASLVMSRTLHEDS-ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           +L  +   ++++ +R L +D+ ++A+HE WMAQ  R Y++ AEKA RF++FK N  FIE 
Sbjct: 11  ILGCLCLCSAVLAARELSDDAAMAARHERWMAQYGRVYRDDAEKARRFEVFKANVAFIES 70

Query: 60  FNREGNQTYKLSLNEFADLTDEEF--IASHTGYKMPTRNISNQSQSYANNWFGYPDSR-R 116
           FN  GN  + L +N+FADLT++EF    ++ G+   T  +           F Y +    
Sbjct: 71  FN-AGNHNFWLGVNQFADLTNDEFRWTKTNKGFIPSTTRVPTG--------FRYENVNID 121

Query: 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-- 174
            LP ++DWR +GAVTP+K+QG CGCCW FSAVAA+EGI K+ TG+LISLSEQ+++DC   
Sbjct: 122 ALPATVDWRTKGAVTPIKDQGQCGCCWAFSAVAAMEGIVKLSTGKLISLSEQELVDCDVH 181

Query: 175 -GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT- 232
              +GC GG MDDAF +II++ GLT E  YPY   +  C  +  +   A I+ Y+DVP  
Sbjct: 182 GEDQGCEGGLMDDAFKFIIKNGGLTTESNYPYAAADDKC--KSVSNSVASIKGYEDVPAN 239

Query: 233 SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YW 291
           +E AL  AV+ QPVSVA+D     F++Y GGV  G CG +L+H +  +GYG +++G  YW
Sbjct: 240 NEAALMKAVANQPVSVAVDGGDMTFQFYKGGVMTGSCGTDLDHGIVAIGYGKASDGTKYW 299

Query: 292 LIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
           L+KNSWG  WGE GF+RM +D+    G+CG+A + SYP A
Sbjct: 300 LLKNSWGTTWGENGFLRMEKDISDKRGMCGLAMEPSYPTA 339


>gi|414588007|tpg|DAA38578.1| TPA: hypothetical protein ZEAMMB73_159244 [Zea mays]
          Length = 307

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 149/313 (47%), Positives = 201/313 (64%), Gaps = 14/313 (4%)

Query: 22  ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDE 81
           ++ +HE WMA+  R YK+ AEKA RF++FK NF F+E FN +    + L +N+FADLT E
Sbjct: 1   MAERHERWMAEYDRVYKDAAEKARRFEVFKDNFAFVESFNADKKNKFWLGVNQFADLTTE 60

Query: 82  EFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGC 141
           EF A+     +    +      Y N       S   LP ++DWR +GAVTP+KNQG CGC
Sbjct: 61  EFKANKGFKPISAEEVPTTGFKYENL------SVSALPTAVDWRTKGAVTPIKNQGQCGC 114

Query: 142 CWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYGGWMDDAFSYIIRSQGLT 198
           CW FSA+AA+EGI K+ TG L+SLSEQ+ +DC       GC GGWMD+AF ++I++ GL 
Sbjct: 115 CWAFSAIAAMEGIVKLSTGNLVSLSEQEPVDCDTHNMDEGCEGGWMDNAFEFVIKNGGLA 174

Query: 199 DERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGF 257
            E  YPY+  +G C  + G+  AA I+ ++DV P +E AL   V+ QPVSVA+DAS   F
Sbjct: 175 TESSYPYKVVDGKC--KGGSKSAATIKGHEDVPPNNEAALMKVVASQPVSVAVDASDRTF 232

Query: 258 RYYSGGVFAGPCGNNLNHAVTIVGYG-SSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA 316
             YSGGV  G CG  L+H +  +GYG  S++  YW++KNSWG  WGE GF+RM +D+   
Sbjct: 233 MLYSGGVMTGSCGTQLDHGIAAIGYGVESDDTKYWILKNSWGTTWGEKGFLRMEKDISDK 292

Query: 317 -GLCGIARKASYP 328
            G+C +A K SYP
Sbjct: 293 RGMCDLAMKPSYP 305


>gi|1208549|gb|AAC49455.1| Pseudotzain [Pseudotsuga menziesii]
          Length = 454

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 156/316 (49%), Positives = 207/316 (65%), Gaps = 9/316 (2%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           +D+I   +ELW+AQ  + Y    EK  +F +FK NF +I + N +GN +YKL LN+FADL
Sbjct: 37  DDAIMELYELWLAQHKKAYNGLDEKQKKFSVFKDNFLYIHQHNNQGNPSYKLGLNQFADL 96

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
           + EEF A++ G K+  +   ++S S    +    D    LP SIDWR +GAVT VKNQGS
Sbjct: 97  SHEEFKAAYLGTKLDAKKRLSRSPSPRYQYSVGED----LPESIDWREKGAVTAVKNQGS 152

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQG 196
           CG CW FS VAAVEGI +I TG L SLSEQ+++DC  S  +GC GG MD AF +II + G
Sbjct: 153 CGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCDTSYNQGCNGGLMDYAFQFIISNGG 212

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSP 255
           L  E  YPY+   G C+  R       I  Y+DVP   E +L+ A + QP+SVAI+AS  
Sbjct: 213 LDSEDDYPYKANNGSCDAYRKNAHVVTIDDYEDVPENDEKSLKKAAANQPISVAIEASGR 272

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG 315
            F++Y  GVF   CG  L+H VT+VGYGS +   YWL+KNSWG +WGE GFI+++R++ G
Sbjct: 273 AFQFYESGVFTSNCGTQLDHGVTLVGYGSESGIDYWLVKNSWGNSWGEKGFIKLQRNLEG 332

Query: 316 A--GLCGIARKASYPI 329
           A  G+CGIA +ASYP+
Sbjct: 333 ASTGMCGIAMEASYPV 348


>gi|400180443|gb|AFP73358.1| cysteine protease, partial [Solanum habrochaites]
          Length = 345

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 154/332 (46%), Positives = 217/332 (65%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + S   +R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNSQTRARSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T EEF+A  TG  +P   +S       +  F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSEEFLAKFTGLNIPNSYLS--PSPMPSTEFKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VKNQG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKNQGQCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +II + G++ E  Y Y  ++  C  Q G   A +I +YQ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIIENGGISRESDYEYLGQQYTCRSQ-GKTAAVQISNYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C N +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASHDLQFYAGGTYDGSCANRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  AGLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGNPAGLCDIAKMSSYP 341


>gi|146216004|gb|ABQ10204.1| cysteine protease Cp6 [Actinidia deliciosa]
          Length = 461

 Score =  307 bits (786), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 160/329 (48%), Positives = 214/329 (65%), Gaps = 11/329 (3%)

Query: 5   MVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREG 64
           M     L  SRT  +D + A +E W+ +  ++Y    EK  RF+IFK N RFI++ N E 
Sbjct: 27  MSIIGELSSSRT--DDEVMAMYESWLVKHGKSYNAIGEKEKRFQIFKDNLRFIDEHNAE- 83

Query: 65  NQTYKLSLNEFADLTDEEFIASHTGYKMPTRN-ISNQSQSYANNWFGYPDSRRGLPRSID 123
           ++TYK+ LN FADLT++E+ + + G +  +R  +S Q +S  + +   P +   LP S+D
Sbjct: 84  SRTYKVGLNRFADLTNDEYRSMYLGARTGSRRRLSTQKRS--DRYV--PVAGESLPDSVD 139

Query: 124 WRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYG 181
           WR +GAV  VK+QGSCG CW FS +AAVEGI +I TG LISLSEQ+++DC  S   GC G
Sbjct: 140 WREKGAVVGVKDQGSCGSCWAFSTIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNG 199

Query: 182 GWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYA 240
           G MD AF +II++ G+  E  YPY  R+G C+  R   K   I  Y+DVP + E AL+ A
Sbjct: 200 GLMDYAFEFIIKNGGIDTEEDYPYNARDGRCDQYRKNAKVVTIDDYEDVPVNNEQALQKA 259

Query: 241 VSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQN 300
           V+ QPVSVAI+AS   F++Y  GVF G CG  L+H VT VGYG+ N   YW++KNSWG +
Sbjct: 260 VANQPVSVAIEASGMAFQFYESGVFTGNCGTALDHGVTAVGYGTENSVDYWIVKNSWGSS 319

Query: 301 WGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           WGE G+IRM R+ G  G CGIA + SYPI
Sbjct: 320 WGESGYIRMERNTGATGKCGIAVEPSYPI 348


>gi|22093636|dbj|BAC06931.1| putative cysteine proteinase [Oryza sativa Japonica Group]
 gi|50510021|dbj|BAD30633.1| putative cysteine proteinase [Oryza sativa Japonica Group]
          Length = 352

 Score =  306 bits (785), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 159/340 (46%), Positives = 212/340 (62%), Gaps = 16/340 (4%)

Query: 1   MLIIMVTWASLVMSRTL--HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIE 58
           +L+++    S +   T+     ++ A+H+ WMA+  RTYK+ AEKA RF++FK N   I+
Sbjct: 15  LLLVVAGGLSTMAKVTMASRAGTMEARHDKWMAEHGRTYKDAAEKARRFRVFKANVDLID 74

Query: 59  KFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL 118
           + N  GN+ Y+L+ N F DLTD EF A +TGY     N +N   + AN            
Sbjct: 75  RSNAAGNKRYRLATNRFTDLTDAEFAAMYTGY-----NPANTMYAAANATTRLSSEDDQQ 129

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRG 178
           P  +DWR +GAVT VKNQ SCGCCW FS VAAVEGI +I TG L+SLSEQQ+LDC+ + G
Sbjct: 130 PAEVDWRQQGAVTGVKNQRSCGCCWAFSTVAAVEGIHQITTGELVSLSEQQLLDCADNGG 189

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQ---RGAMKAARIRSYQDV-PTSE 234
           C GG +D+AF Y+  S G+T E  Y YQ  +G C +      +  AA I  YQ V P  E
Sbjct: 190 CTGGSLDNAFQYMANSGGVTTEAAYAYQGAQGACQFDASSSASGVAATISGYQRVNPNDE 249

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVF-AGPCGNNLNHAVTIVGYGSSNEGP---- 289
            +L  AV+ QPVSVAI+ S   FR+Y  GVF A  CG  L+HAV +VGYG+  +G     
Sbjct: 250 GSLAAAVASQPVSVAIEGSGAMFRHYGSGVFTADSCGTKLDHAVAVVGYGAEADGSGGGG 309

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           YW+IKNSWG  WG+GG++++ +DVG  G CG+A   SYP+
Sbjct: 310 YWIIKNSWGTTWGDGGYMKLEKDVGSQGACGVAMAPSYPV 349


>gi|1046373|gb|AAC49135.1| SAG12 protein [Arabidopsis thaliana]
          Length = 346

 Score =  306 bits (785), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 161/326 (49%), Positives = 215/326 (65%), Gaps = 9/326 (2%)

Query: 10  SLVMSRTLHEDSISAK-HELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNR-EGNQT 67
           S+ +SR L  + I  K H  WM +  R Y +  E+  R+ +FK N   IE  N     +T
Sbjct: 21  SITLSRPLDNELIMQKRHIEWMTKHGRVYADVKEENNRYVVFKNNVERIEHLNSIPAGRT 80

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG-LPRSIDWRA 126
           +KL++N+FADLT++EF + +TG+K     +S+QSQ+  +  F Y +   G LP S+DWR 
Sbjct: 81  FKLAVNQFADLTNDEFCSMYTGFK-GVSALSSQSQTKMSP-FRYQNVSSGALPVSVDWRK 138

Query: 127 RGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMD 185
           +GAVTP+KNQGSCGCCW FSAVAA+EG T+I+ G+LISLSEQQ++DC +   GC GG MD
Sbjct: 139 KGAVTPIKNQGSCGCCWAFSAVAAIEGATQIKKGKLISLSEQQLVDCDTNDFGCEGGLMD 198

Query: 186 DAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQ 244
            AF +I  + GLT E  YPY+  +  CN ++   KA  I  Y+DVP + E AL  AV+ Q
Sbjct: 199 TAFEHIKATGGLTTESDYPYKGEDATCNSKKTNPKATSITGYEDVPVNDEQALMKAVAHQ 258

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGE 303
           PVSV I+     F++YS GVF G C   L+HAVT +GYG S  G  YW+IKNSWG  WGE
Sbjct: 259 PVSVGIEGGGFDFQFYSSGVFTGECTTYLDHAVTAIGYGESTNGSKYWIIKNSWGTKWGE 318

Query: 304 GGFIRMRRDVGGA-GLCGIARKASYP 328
            G++R+++DV    GLCG+A KASYP
Sbjct: 319 SGYMRIQKDVKDKQGLCGLAMKASYP 344


>gi|21070926|gb|AAM34401.1|AF377947_7 putative cysteine proteinase [Oryza sativa Japonica Group]
 gi|31712050|gb|AAP68356.1| putative cysteine protease [Oryza sativa Japonica Group]
 gi|40538988|gb|AAR87245.1| putative cysteine protease [Oryza sativa Japonica Group]
 gi|108711126|gb|ABF98921.1| Papain family cysteine protease containing protein, expressed
           [Oryza sativa Japonica Group]
 gi|125545747|gb|EAY91886.1| hypothetical protein OsI_13535 [Oryza sativa Indica Group]
          Length = 350

 Score =  306 bits (784), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 162/316 (51%), Positives = 212/316 (67%), Gaps = 15/316 (4%)

Query: 24  AKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN----REGNQTYKLSLNEFADLT 79
           ++HE WMA+  +TYK++ EKA R ++F+ N + I+ FN    ++G   ++L+ N FADLT
Sbjct: 40  SRHEKWMAKHGKTYKDEEEKARRLEVFRANAKLIDSFNAAAEKDGGGGHRLATNRFADLT 99

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
           D+EF A+ TGY+ P   ++     +    F    S    P+S+DWRA GAVT VK+QGSC
Sbjct: 100 DDEFRAARTGYQRPPAAVAGAGGGFLYENF----SLAAAPQSMDWRAMGAVTGVKDQGSC 155

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQG 196
           GCCW FSAVAAVEG+ KIRTG+L+SLSEQ+++DC      +GC GG MD AF YI R  G
Sbjct: 156 GCCWAFSAVAAVEGLAKIRTGQLVSLSEQELVDCDVRGEDQGCEGGLMDTAFQYIARRGG 215

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSP 255
           L  E  YPY R             AA IR +QDVP++ E AL  AV+RQPVSVAI+ +  
Sbjct: 216 LAAESSYPY-RGVDGACRAAAGRAAASIRGFQDVPSNDEGALMAAVARQPVSVAINGAGY 274

Query: 256 GFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRDV 313
            FR+Y  GV  G  CG  LNHAVT VGYG++++G  YWL+KNSWG +WGEGG++R+RR V
Sbjct: 275 VFRFYDRGVLGGAGCGTELNHAVTAVGYGTASDGTGYWLMKNSWGASWGEGGYVRIRRGV 334

Query: 314 GGAGLCGIARKASYPI 329
           G  G CGIA+ ASYP+
Sbjct: 335 GREGACGIAQMASYPV 350


>gi|218198967|gb|EEC81394.1| hypothetical protein OsI_24614 [Oryza sativa Indica Group]
          Length = 342

 Score =  306 bits (783), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 159/340 (46%), Positives = 212/340 (62%), Gaps = 16/340 (4%)

Query: 1   MLIIMVTWASLVMSRTL--HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIE 58
           +L+++    S +   T+     ++ A+H+ WMA+  RTYK+ AEKA RF++FK N   I+
Sbjct: 5   LLLVVAGGLSTMAKVTMASRAGTMEARHDKWMAEHGRTYKDAAEKARRFRVFKANVDLID 64

Query: 59  KFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL 118
           + N  GN+ Y+L+ N F DLTD EF A +TGY     N +N   + AN            
Sbjct: 65  RSNAAGNKRYRLATNRFTDLTDAEFAAMYTGY-----NPANTMYAAANATTRLSSEDDQQ 119

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRG 178
           P  +DWR +GAVT VKNQ SCGCCW FS VAAVEGI +I TG L+SLSEQQ+LDC+ + G
Sbjct: 120 PAEVDWRQQGAVTGVKNQRSCGCCWAFSTVAAVEGIHQITTGELVSLSEQQLLDCADNGG 179

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQ---RGAMKAARIRSYQDV-PTSE 234
           C GG +D+AF Y+  S G+T E  Y YQ  +G C +      +  AA I  YQ V P  E
Sbjct: 180 CTGGSLDNAFQYMANSGGVTTEAAYAYQGAQGACQFDASSSASGVAATISGYQRVNPNDE 239

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVF-AGPCGNNLNHAVTIVGYGSSNEGP---- 289
            +L  AV+ QPVSVAI+ S   FR+Y  GVF A  CG  L+HAV +VGYG+  +G     
Sbjct: 240 GSLAAAVASQPVSVAIEGSGAMFRHYGSGVFTADSCGTKLDHAVAVVGYGAEADGSGGGG 299

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           YW+IKNSWG  WG+GG++++ +DVG  G CG+A   SYP+
Sbjct: 300 YWIIKNSWGTTWGDGGYMKLEKDVGSQGACGVAMAPSYPV 339


>gi|350535639|ref|NP_001233949.1| phytophthora-inhibited protease 1 [Solanum lycopersicum]
 gi|108937128|gb|ABG23376.1| phytophthora-inhibited protease 1 [Solanum lycopersicum]
          Length = 345

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 157/336 (46%), Positives = 213/336 (63%), Gaps = 12/336 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  I+  +  +V SR L E S+  +HE WM    R YK+  EK  RFK FK+N  FIE F
Sbjct: 16  LFSILSLYPFIVTSRNLKELSMLERHENWMVHHGRVYKDDIEKEHRFKTFKENVEFIESF 75

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+ G Q YKL++N++ADLT EEF  S  G  + T  +S Q  +     F Y DS   +P 
Sbjct: 76  NKNGTQRYKLAVNKYADLTTEEFTTSFMG--LDTSLLSQQESTATTTSFKY-DSVTEVPN 132

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGC 179
           S+DWR RG+VT VK+QG CGCCW FSA AA+EG  +I    LISLSEQQ+LDCS  ++GC
Sbjct: 133 SMDWRKRGSVTGVKDQGVCGCCWAFSAAAAIEGAYQIANNELISLSEQQLLDCSTQNKGC 192

Query: 180 YGGWMDDAFSYIIRSQ--GLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELAL 237
            GG M  A+ +++++   G+T E  YPY+  +  C  ++ A  A  I  Y+ VP+ E +L
Sbjct: 193 EGGLMTVAYDFLLQNNGGGITTETNYPYEEAQNVCKTEQPA--AVTINGYEVVPSDESSL 250

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG--PYWLIKN 295
             AV  QP+SV I A++  F  Y  G++ G C + LNHAVT++GYG+S E    YW++KN
Sbjct: 251 LKAVVNQPISVGI-AANDEFHMYGSGIYDGSCNSRLNHAVTVIGYGTSEEDGTKYWIVKN 309

Query: 296 SWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPIA 330
           SWG +WGE G++R+ RDVG   G CGIA+ AS+P A
Sbjct: 310 SWGSDWGEEGYMRIARDVGVDGGHCGIAKVASFPTA 345


>gi|18422605|ref|NP_568651.1| senescence-associated protein 12 [Arabidopsis thaliana]
 gi|13877737|gb|AAK43946.1|AF370131_1 putative senescence-specific cysteine protease SAG12 [Arabidopsis
           thaliana]
 gi|9758936|dbj|BAB09317.1| senescence-specific cysteine protease [Arabidopsis thaliana]
 gi|14532898|gb|AAK64131.1| putative senescence-specific cysteine protease SAG12 [Arabidopsis
           thaliana]
 gi|332007929|gb|AED95312.1| senescence-associated protein 12 [Arabidopsis thaliana]
          Length = 346

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 161/326 (49%), Positives = 215/326 (65%), Gaps = 9/326 (2%)

Query: 10  SLVMSRTLHEDSISAK-HELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNR-EGNQT 67
           S+ +SR L  + I  K H  WM +  R Y +  E+  R+ +FK N   IE  N     +T
Sbjct: 21  SITLSRPLDNELIMQKRHIEWMTKHGRVYADVKEENNRYVVFKNNVERIEHLNSIPAGRT 80

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG-LPRSIDWRA 126
           +KL++N+FADLT++EF + +TG+K     +S+QSQ+  +  F Y +   G LP S+DWR 
Sbjct: 81  FKLAVNQFADLTNDEFRSMYTGFK-GVSALSSQSQTKMSP-FRYQNVSSGALPVSVDWRK 138

Query: 127 RGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMD 185
           +GAVTP+KNQGSCGCCW FSAVAA+EG T+I+ G+LISLSEQQ++DC +   GC GG MD
Sbjct: 139 KGAVTPIKNQGSCGCCWAFSAVAAIEGATQIKKGKLISLSEQQLVDCDTNDFGCEGGLMD 198

Query: 186 DAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQ 244
            AF +I  + GLT E  YPY+  +  CN ++   KA  I  Y+DVP + E AL  AV+ Q
Sbjct: 199 TAFEHIKATGGLTTESNYPYKGEDATCNSKKTNPKATSITGYEDVPVNDEQALMKAVAHQ 258

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGE 303
           PVSV I+     F++YS GVF G C   L+HAVT +GYG S  G  YW+IKNSWG  WGE
Sbjct: 259 PVSVGIEGGGFDFQFYSSGVFTGECTTYLDHAVTAIGYGESTNGSKYWIIKNSWGTKWGE 318

Query: 304 GGFIRMRRDVGGA-GLCGIARKASYP 328
            G++R+++DV    GLCG+A KASYP
Sbjct: 319 SGYMRIQKDVKDKQGLCGLAMKASYP 344


>gi|212275830|ref|NP_001130503.1| cysteine protease 1 [Zea mays]
 gi|194689328|gb|ACF78748.1| unknown [Zea mays]
 gi|219886279|gb|ACL53514.1| unknown [Zea mays]
 gi|238010470|gb|ACR36270.1| unknown [Zea mays]
 gi|413920875|gb|AFW60807.1| cysteine protease 1 [Zea mays]
          Length = 354

 Score =  305 bits (780), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 161/322 (50%), Positives = 217/322 (67%), Gaps = 21/322 (6%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGN--QTYKLSLNEFA 76
           E+++  +H+ WMA+  RTY+++AEKA RF++FK N  F++  N  G+  ++Y+L LNEFA
Sbjct: 44  EEAMKVRHQQWMAEHGRTYRDEAEKAHRFQVFKANADFVDASNAAGDDKKSYRLELNEFA 103

Query: 77  DLTDEEFIASHTGYK-MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
           D+T++EF+A +TG + +P          Y N      D  +   +++DWR +GAVT +KN
Sbjct: 104 DMTNDEFMAMYTGLRPVPAGAKKMAGFKYGNVTLSDADDDQ---QTVDWRQKGAVTGIKN 160

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIR 193
           QG CGCCW F+AVAAVEGI +I TG L+SLSEQQVLDC   G+ GC GG++D+AF YI+ 
Sbjct: 161 QGQCGCCWAFAAVAAVEGIHQITTGNLVSLSEQQVLDCDTDGNNGCNGGYIDNAFQYIVG 220

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDA 252
           + GL  E  YPY   +  C   +     A I  YQDVP+  E AL  AV+ QPVSVAIDA
Sbjct: 221 NGGLGTEDAYPYTAAQAMC---QSVQPVAAISGYQDVPSGDEAALAAAVANQPVSVAIDA 277

Query: 253 SSPGFRYYSGGVF-AGPCGN--NLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIR 308
            +  F+ Y GGV  A  C    NLNHAVT VGYG++ +G PYWL+KN WGQNWGEGG++R
Sbjct: 278 HN--FQLYGGGVMTAASCSTPPNLNHAVTAVGYGTAEDGTPYWLLKNQWGQNWGEGGYLR 335

Query: 309 MRRDVGGAGLCGIARKASYPIA 330
           + R   GA  CG+A++ASYP+A
Sbjct: 336 LER---GANACGVAQQASYPVA 354


>gi|400180377|gb|AFP73327.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  305 bits (780), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 152/332 (45%), Positives = 215/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  E S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPELSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +II + G++ E  Y YQ  +  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIIENGGISRESDYEYQGEQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGNPSGLCDIAKMSSYP 341


>gi|146215984|gb|ABQ10194.1| actinidin Act2c [Actinidia arguta]
          Length = 378

 Score =  304 bits (779), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 151/333 (45%), Positives = 210/333 (63%), Gaps = 14/333 (4%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L+I+ +   +V S     D +   +E W+ +  ++Y +  EK MRF+IFK N R I+  N
Sbjct: 18  LLILSSALDIVNSAQRTNDQVRDMYESWLVEQGKSYNSLDEKEMRFEIFKDNLRIIDDHN 77

Query: 62  REGNQTYKLSLNEFADLTDEEFIASHTGYKM-PTRNISNQSQSYANNWFGYPDSRRGLPR 120
            + N+++ L LN FADLTDEE+ +++ G+K  P   +SN+           P     LP 
Sbjct: 78  ADANRSFSLGLNRFADLTDEEYRSTYLGFKSGPKAKVSNRY---------VPKVGDVLPN 128

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSR 177
            +DWR  GAV  VKNQG C  CW FSAVAAVEGI KI TG L+SLSEQ+++DC     +R
Sbjct: 129 YVDWRTVGAVVGVKNQGLCSSCWAFSAVAAVEGINKIMTGNLLSLSEQELVDCGRTQSTR 188

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELA 236
           GC  G+M DAF +II + G+  E  YPY  ++G CN      K   I  Y++VP++ E A
Sbjct: 189 GCNRGYMTDAFQFIINNGGINTEDNYPYTAQDGQCNRYLQNQKYVTIDDYENVPSNNEWA 248

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNS 296
           L+ AV+ QPVSV +++    F+ Y+ G+F   CG  ++H VTIVGYG+     YW++KNS
Sbjct: 249 LQNAVAHQPVSVGLESEGGKFKLYTSGIFTQYCGTAIDHGVTIVGYGTERGLDYWIVKNS 308

Query: 297 WGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           WG NWGE G+IR++R++GGAG CGIAR ASYP+
Sbjct: 309 WGTNWGENGYIRIQRNIGGAGKCGIARMASYPV 341


>gi|449524070|ref|XP_004169046.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like, partial
           [Cucumis sativus]
          Length = 314

 Score =  304 bits (778), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 158/312 (50%), Positives = 207/312 (66%), Gaps = 17/312 (5%)

Query: 22  ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDE 81
           I  +++ WM +  R YK++ E   RF I++ N ++I+ FN   N ++ L+ N FADLT+E
Sbjct: 15  IQDRYQKWMDKYGRQYKSREEWERRFTIYQANVQYIDNFNSM-NHSHTLAENNFADLTNE 73

Query: 82  EFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGC 141
           EF A++ GYK  T +I +    Y N           LP ++DWR  GAVTP+KNQG CG 
Sbjct: 74  EFKATYLGYK--TVSIPDTCFRYGN--------MVNLPTNVDWRQEGAVTPIKNQGQCGS 123

Query: 142 CWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSRGCYGGWMDDAFSYIIRSQGLT 198
           CW FSAVAAVEGI KI+ G+LISLSEQ+++DC   SG++GC GG+M  AF +I R+ GLT
Sbjct: 124 CWAFSAVAAVEGINKIKAGKLISLSEQELVDCDVTSGNQGCNGGYMYKAFEFIKRT-GLT 182

Query: 199 DERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGF 257
            E  YPYQ  E  CN Q+   +   I  Y+ VP + E +L+ AV+ QPVSVAIDA    F
Sbjct: 183 TEIEYPYQGAESACNEQKEKYQFVSISGYEKVPVNDEKSLKAAVANQPVSVAIDAEGNNF 242

Query: 258 RYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRD-VGGA 316
           ++YSGG+F+G CGN LNH V IVGYG ++   YWL+KNSWG +WGE G+IRM+RD     
Sbjct: 243 QFYSGGIFSGNCGNQLNHGVAIVGYGETSNQAYWLVKNSWGTDWGESGYIRMKRDSTDKQ 302

Query: 317 GLCGIARKASYP 328
           G CGIA  ASYP
Sbjct: 303 GTCGIAMMASYP 314


>gi|400180435|gb|AFP73355.1| cysteine protease [Solanum pennellii]
          Length = 344

 Score =  303 bits (777), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 152/332 (45%), Positives = 215/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +   +R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRARSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYVSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VKNQG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKNQGQCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +I  + G++ E  Y Y  ++  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIKENGGISRESDYEYLGQQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C N +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCANRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  AGLC IA+ +SYP
Sbjct: 310 GTSWGEDGFMKIIRDSGNPAGLCDIAKVSSYP 341


>gi|400180422|gb|AFP73349.1| cysteine protease [Solanum chmielewskii]
          Length = 344

 Score =  303 bits (777), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 152/332 (45%), Positives = 215/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISIFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKTNDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGQCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +II + G++ E  Y Y  ++  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIIENGGISRESDYEYLGQQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++YSGG + G C + +NHAVT +GYG+  EG  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYSGGTYDGSCADRINHAVTAIGYGTDEEGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGDPSGLCDIAKMSSYP 341


>gi|449460678|ref|XP_004148072.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Cucumis
           sativus]
          Length = 317

 Score =  303 bits (777), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 158/312 (50%), Positives = 207/312 (66%), Gaps = 17/312 (5%)

Query: 22  ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDE 81
           I  +++ WM +  R YK++ E   RF I++ N ++I+ FN   N ++ L+ N FADLT+E
Sbjct: 15  IQDRYQKWMDKYGRQYKSREEWERRFTIYQANVQYIDNFNSM-NHSHTLAENNFADLTNE 73

Query: 82  EFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGC 141
           EF A++ GYK  T +I +    Y N           LP ++DWR  GAVTP+KNQG CG 
Sbjct: 74  EFKATYLGYK--TVSIPDTCFRYGN--------MVNLPTNVDWRQEGAVTPIKNQGQCGS 123

Query: 142 CWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSRGCYGGWMDDAFSYIIRSQGLT 198
           CW FSAVAAVEGI KI+ G+LISLSEQ+++DC   SG++GC GG+M  AF +I R+ GLT
Sbjct: 124 CWAFSAVAAVEGINKIKAGKLISLSEQELVDCDVTSGNQGCNGGYMYKAFEFIKRT-GLT 182

Query: 199 DERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGF 257
            E  YPYQ  E  CN Q+   +   I  Y+ VP + E +L+ AV+ QPVSVAIDA    F
Sbjct: 183 TEIEYPYQGAESACNEQKEKYQFVSISGYEKVPVNDEKSLKAAVANQPVSVAIDAEGNNF 242

Query: 258 RYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRD-VGGA 316
           ++YSGG+F+G CGN LNH V IVGYG ++   YWL+KNSWG +WGE G+IRM+RD     
Sbjct: 243 QFYSGGIFSGNCGNQLNHGVAIVGYGETSNQAYWLVKNSWGTDWGESGYIRMKRDSTDRQ 302

Query: 317 GLCGIARKASYP 328
           G CGIA  ASYP
Sbjct: 303 GTCGIAMMASYP 314


>gi|400180441|gb|AFP73357.1| cysteine protease [Solanum habrochaites]
          Length = 344

 Score =  303 bits (776), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 153/332 (46%), Positives = 214/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + S   +R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNSQTRARSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T EEF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSEEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDISDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VKNQG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKNQGQCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +I  + G++ E  Y Y  ++  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIRENGGISRESDYEYLGQQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C N +NHAVT +GYG+   G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCANRINHAVTAIGYGTDENGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 310 GTSWGEKGFMKIIRDYGNPSGLCDIAKLSSYP 341


>gi|226502454|ref|NP_001140922.1| hypothetical protein [Zea mays]
 gi|223948637|gb|ACN28402.1| unknown [Zea mays]
 gi|413920877|gb|AFW60809.1| hypothetical protein ZEAMMB73_830238 [Zea mays]
          Length = 354

 Score =  303 bits (775), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 160/322 (49%), Positives = 216/322 (67%), Gaps = 21/322 (6%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGN--QTYKLSLNEFA 76
           E+++  +H+ WMA+  RTY+++AEKA RF++FK N  F++  N  G+  ++Y++ LNEFA
Sbjct: 44  EEAMKVRHQQWMAEHGRTYRDEAEKAHRFQVFKANADFVDASNAAGDDKKSYRMELNEFA 103

Query: 77  DLTDEEFIASHTGYK-MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
           D+T++EF+A +TG + +P          Y N      D  +   +++DWR +GAVT +KN
Sbjct: 104 DMTNDEFMAMYTGLRPVPAGAKKMAGFKYGNVTLSDADDNQ---QTVDWRQKGAVTGIKN 160

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYIIR 193
           QG CGCCW F+AVAAVEGI +I TG L+SLSEQQVLDC   G+ GC GG++D+AF YI  
Sbjct: 161 QGQCGCCWAFAAVAAVEGIHQITTGNLVSLSEQQVLDCDTEGNNGCNGGYIDNAFQYIAG 220

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDA 252
           + GL  E  YPY   +  C   +     A I  YQDVP+  E AL  AV+ QPVSVAIDA
Sbjct: 221 NGGLATEDAYPYTAAQAMC---QSVQPVAAISGYQDVPSGDEAALAAAVANQPVSVAIDA 277

Query: 253 SSPGFRYYSGGVF-AGPCGN--NLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIR 308
            +  F+ Y GGV  A  C    NLNHAVT VGYG++ +G PYWL+KN WGQNWGEGG++R
Sbjct: 278 HN--FQLYGGGVMTAASCSTPPNLNHAVTAVGYGTAEDGTPYWLLKNQWGQNWGEGGYLR 335

Query: 309 MRRDVGGAGLCGIARKASYPIA 330
           + R   GA  CG+A++ASYP+A
Sbjct: 336 LER---GANACGVAQQASYPVA 354


>gi|193806686|sp|A5HII1.1|ACTN_ACTDE RecName: Full=Actinidain; Short=Actinidin; AltName: Full=Allergen
           Act d 1; AltName: Allergen=Act d 1; Flags: Precursor
 gi|146215974|gb|ABQ10189.1| actinidin Act1a [Actinidia deliciosa]
          Length = 380

 Score =  302 bits (774), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 149/333 (44%), Positives = 218/333 (65%), Gaps = 12/333 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +LI+ + + +  +++  + D + A +E W+ +  ++Y +  E   RF+IFK+  RFI++ 
Sbjct: 18  LLILSLAFNAKNLTQRTN-DEVKAMYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEH 76

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N + N++YK+ LN+FADLTDEEF +++ G+   + N +  S  Y       P   + LP 
Sbjct: 77  NADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGS-NKTKVSNRYE------PRVGQVLPS 129

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSR 177
            +DWR+ GAV  +K+QG CG CW FSA+A VEGI KI TG LISLSEQ+++DC     +R
Sbjct: 130 YVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTR 189

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELA 236
           GC GG++ D F +II + G+  E  YPY  ++G CN      K   I +Y++VP  +E A
Sbjct: 190 GCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNLDLQNEKYVTIDTYENVPYNNEWA 249

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNS 296
           L+ AV+ QPVSVA+DA+   F++YS G+F GPCG  ++HAVTIVGYG+     YW++KNS
Sbjct: 250 LQTAVTYQPVSVALDAAGDAFKHYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDYWIVKNS 309

Query: 297 WGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           W   WGE G++R+ R+VGGAG CGIA   SYP+
Sbjct: 310 WDTTWGEEGYMRILRNVGGAGTCGIATMPSYPV 342


>gi|146215978|gb|ABQ10191.1| actinidin Act1c [Actinidia eriantha]
          Length = 368

 Score =  302 bits (774), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 147/324 (45%), Positives = 211/324 (65%), Gaps = 11/324 (3%)

Query: 10  SLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYK 69
           SL +      D + A +E W+ +  ++Y +  E+  RF+IFK+  RFI++ N + +++YK
Sbjct: 22  SLALDAKRTNDEVKAMYESWLIKHGKSYNSLGERERRFEIFKETLRFIDEHNADTSRSYK 81

Query: 70  LSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGA 129
           + LN+FADLT+EEF +++ G+   + N +  S  Y       P   + LP  +DWR+ GA
Sbjct: 82  VGLNQFADLTNEEFRSTYLGFTRGS-NKTKVSNRYE------PRVGQVLPDYVDWRSEGA 134

Query: 130 VTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSRGCYGGWMDD 186
           V  +KNQG CG CW FSA+AAVEGI KI TG LISLSEQ+++DC     ++GC GG+M D
Sbjct: 135 VVDIKNQGQCGSCWAFSAIAAVEGINKIVTGNLISLSEQELVDCGRTQSTKGCDGGYMTD 194

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQP 245
            F +II + G+  E  YPY  +EG C+      K   I +Y++VP  +E AL+ AV+ QP
Sbjct: 195 GFEFIINNGGINTEENYPYTAQEGQCDLNLQNEKYVTIDNYENVPYYNEWALQTAVAYQP 254

Query: 246 VSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGG 305
           VSVA++++   F++YS G+F GPCG   +HAVTIVGYG+     YW++KNSW   WGE G
Sbjct: 255 VSVALESAGDAFQHYSSGIFTGPCGTATDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEG 314

Query: 306 FIRMRRDVGGAGLCGIARKASYPI 329
           ++R+ R+VGGAG CGIA   SYP+
Sbjct: 315 YMRILRNVGGAGTCGIATMPSYPV 338


>gi|15984|emb|CAA34486.1| unnamed protein product [Actinidia deliciosa]
          Length = 380

 Score =  302 bits (774), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 149/333 (44%), Positives = 218/333 (65%), Gaps = 12/333 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +LI+ + + +  +++  + D + A +E W+ +  ++Y +  E   RF+IFK+  RFI++ 
Sbjct: 18  LLILSLAFNAKNLTQRTN-DEVKAMYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEH 76

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N + N++YK+ LN+FADLTDEEF +++ G+   + N +  S  Y       P   + LP 
Sbjct: 77  NADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGS-NKTKVSNRYE------PRFGQVLPS 129

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSR 177
            +DWR+ GAV  +K+QG CG CW FSA+A VEGI KI TG LISLSEQ+++DC     +R
Sbjct: 130 YVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTR 189

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELA 236
           GC GG++ D F +II + G+  E  YPY  ++G CN      K   I +Y++VP  +E A
Sbjct: 190 GCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNLDLQNEKYVTIDTYENVPYNNEWA 249

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNS 296
           L+ AV+ QPVSVA+DA+   F++YS G+F GPCG  ++HAVTIVGYG+     YW++KNS
Sbjct: 250 LQTAVTYQPVSVALDAAGDAFKHYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDYWIVKNS 309

Query: 297 WGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           W   WGE G++R+ R+VGGAG CGIA   SYP+
Sbjct: 310 WDTTWGEEGYMRILRNVGGAGTCGIATMPSYPV 342


>gi|2144501|pir||TAGB actinidain (EC 3.4.22.14) precursor - kiwi fruit
 gi|166317|gb|AAA32629.1| actinidin [Actinidia deliciosa]
          Length = 380

 Score =  301 bits (771), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 149/333 (44%), Positives = 218/333 (65%), Gaps = 12/333 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +LI+ + + +  +++  + D + A +E W+ +  ++Y +  E   RF+IFK+  RFI++ 
Sbjct: 18  LLILSLAFNAKNLTQRTN-DEVKAMYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEH 76

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N + N++YK+ LN+FADLTDEEF +++ G+   + N +  S  Y       P   + LP 
Sbjct: 77  NADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGS-NKTKVSNRYE------PRVGQVLPS 129

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSR 177
            +DWR+ GAV  +K+QG CG CW FSA+A VEGI KI TG LISLSEQ+++DC     +R
Sbjct: 130 YVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTR 189

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELA 236
           GC GG++ D F +II + G+  E  YPY  ++G CN +    K   I +Y++VP  +E A
Sbjct: 190 GCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNVELQNEKYVTIDTYENVPYNNEWA 249

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNS 296
           L+ AV+ QPVSVA+DA+   F+ YS G+F GPCG  ++HAVTIVGYG+     YW++KNS
Sbjct: 250 LQTAVTYQPVSVALDAAGDAFKQYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDYWIVKNS 309

Query: 297 WGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           W   WGE G++R+ R+VGGAG CGIA   SYP+
Sbjct: 310 WDTTWGEEGYMRILRNVGGAGTCGIATMPSYPV 342


>gi|312451836|gb|ADQ85985.1| actinidin [Actinidia chinensis]
          Length = 380

 Score =  301 bits (770), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 149/333 (44%), Positives = 217/333 (65%), Gaps = 12/333 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +LI+ + + +  +++  + D + A +E W+ +  ++Y +  E   RF+IFK+  RFI++ 
Sbjct: 18  LLILSLAFNTKNLTQRTN-DEVKAMYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEH 76

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N + N++YK+ LN+FADLTDEEF +++ G+   + N +  S  Y       P   + LP 
Sbjct: 77  NADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGS-NKTKVSNRYE------PRVGQVLPS 129

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSR 177
            +DWR+ GAV  +K+QG CG CW FSA+A VEGI KI TG LISLSEQ+++DC     +R
Sbjct: 130 YVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTR 189

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELA 236
           GC GG++ D F +II + G+  E  YPY  ++G CN      K   I +Y++VP  +E A
Sbjct: 190 GCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNVDLQNEKYVTIDTYENVPYNNEWA 249

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNS 296
           L+ AV+ QPVSVA+DA+   F+ YS G+F GPCG  ++HAVTIVGYG+     YW++KNS
Sbjct: 250 LQTAVTYQPVSVALDAAGDAFKQYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDYWIVKNS 309

Query: 297 WGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           W   WGE G++R+ R+VGGAG CGIA   SYP+
Sbjct: 310 WDTTWGEEGYMRILRNVGGAGTCGIATMPSYPV 342


>gi|400180375|gb|AFP73326.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  301 bits (770), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 151/332 (45%), Positives = 214/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + S   +R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNSQTRARSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENIKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +I  + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CDGGFMTNAFDFIKENGGISSESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  AGLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGNPAGLCDIAKMSSYP 341


>gi|400180345|gb|AFP73311.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  301 bits (770), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 151/332 (45%), Positives = 214/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +II + G++ E  Y Y  ++  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CDGGFMTNAFDFIIENGGISRESDYEYLGQQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+   G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDENGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  AGLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDYGNPAGLCDIAKMSSYP 341


>gi|400180428|gb|AFP73352.1| cysteine protease [Solanum corneliomuelleri]
          Length = 344

 Score =  301 bits (770), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 150/332 (45%), Positives = 215/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +   +R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRARSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +II + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIIENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGNPSGLCDIAKMSSYP 341


>gi|400180353|gb|AFP73315.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  301 bits (770), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 149/331 (45%), Positives = 214/331 (64%), Gaps = 6/331 (1%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S +  +     S   +P 
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS-STEFIINDLSDDDMPS 132

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-GC 179
           ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  GC
Sbjct: 133 NLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGC 192

Query: 180 YGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRY 239
            GG+M +AF +II + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L  
Sbjct: 193 NGGFMTNAFDFIIENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLLQ 251

Query: 240 AVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWG 298
           AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSWG
Sbjct: 252 AVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWG 310

Query: 299 QNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
            +WGE GF+++ RD G  AGLC IA+ +SYP
Sbjct: 311 TSWGENGFMKIIRDSGNPAGLCDIAKMSSYP 341


>gi|400180447|gb|AFP73360.1| cysteine protease [Solanum chilense]
          Length = 345

 Score =  301 bits (770), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 148/331 (44%), Positives = 213/331 (64%), Gaps = 5/331 (1%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S          S   +P 
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTEFKKINDLSDDDMPS 133

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-GC 179
           ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG+L+  SEQ++LDC+ +  GC
Sbjct: 134 NLDWRESGAVTQVKHQGQCGCCWAFSAVGSLEGAYKIATGKLMEFSEQELLDCTTNNYGC 193

Query: 180 YGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRY 239
            GG+M +AF +II + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L  
Sbjct: 194 NGGFMTNAFDFIIENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLLQ 252

Query: 240 AVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWG 298
           AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSWG
Sbjct: 253 AVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWG 311

Query: 299 QNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
            +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 312 TSWGENGFMKIIRDSGNPSGLCDIAKMSSYP 342


>gi|62526575|gb|AAX84673.1| cysteine protease CP1 [Manihot esculenta]
          Length = 467

 Score =  300 bits (769), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 157/335 (46%), Positives = 208/335 (62%), Gaps = 13/335 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           M II         S    +D + A +E W+ +  + Y    E+  RF++FK N RFI++ 
Sbjct: 27  MSIISYDQTHATKSSWRTDDEVMAIYEEWLVKQGKVYNALGEREKRFQVFKDNLRFIDEH 86

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYK--MPTRNISNQSQSYANNWFGYPDSRRGL 118
           N E N+TYKL LN FADLT+EE+ +++ G +  M    +   S  YA      P     L
Sbjct: 87  NSE-NRTYKLGLNGFADLTNEEYRSTYLGARGGMKRNRLRKTSDRYA------PRVGESL 139

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS-- 176
           P S+DWR  GAV  VK+QGSCG CW FS +AAVEGI KI TG LISLSEQ+++DC  S  
Sbjct: 140 PDSVDWRKEGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGDLISLSEQELVDCDTSYN 199

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SEL 235
            GC GG MD AF +II + G+  E  YPY  R+G C+  R   K   I  Y+DVP  SE 
Sbjct: 200 EGCNGGLMDYAFEFIINNGGIDTEEDYPYLARDGRCDTYRKNAKVVTIDDYEDVPVNSET 259

Query: 236 ALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKN 295
           AL+ AV+ QPVSVAI+A    F++Y+ G+F+G CG  L+H V  VGYG+ N   YW+++N
Sbjct: 260 ALQKAVANQPVSVAIEAGGRDFQFYASGIFSGRCGTQLDHGVAAVGYGTENGKDYWIVRN 319

Query: 296 SWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
           SWG++WGE G++RM R +    G+CGIA +ASYPI
Sbjct: 320 SWGKSWGENGYLRMARSINSPTGICGIAMEASYPI 354


>gi|400180357|gb|AFP73317.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  300 bits (769), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 150/332 (45%), Positives = 216/332 (65%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + S   +R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNSQTRARSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +II + G++ E  Y Y  ++  C  Q     A +I SY+ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIIENGGISRESDYEYLGQQYTCRSQE-KTAAVQISSYKVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDYGNPSGLCDIAKMSSYP 341


>gi|400180449|gb|AFP73361.1| cysteine protease [Solanum chilense]
          Length = 344

 Score =  300 bits (769), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 150/332 (45%), Positives = 214/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFKKN +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKKNMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG+L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGQCGCCWAFSAVGSLEGAYKIATGKLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +II + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIIENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+ G + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAEGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGNPSGLCDIAKMSSYP 341


>gi|195628596|gb|ACG36128.1| vignain precursor [Zea mays]
          Length = 362

 Score =  300 bits (769), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 156/328 (47%), Positives = 211/328 (64%), Gaps = 17/328 (5%)

Query: 10  SLVMSRTLHEDS--ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQT 67
           S  + RT   D   + A+++ WMAQ  R YK+ AEKA RF++FK N  FI++ N  G + 
Sbjct: 41  STTVGRTTGGDEAMMMARYKKWMAQYRRKYKDDAEKAHRFQVFKANAEFIDRSNAGGKKK 100

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRA 126
           Y L  N+FADLT +EF A +TG + P    S   Q  A   F Y + +R      +DWR 
Sbjct: 101 YVLGTNQFADLTSKEFAAMYTGLRKPAAVPSGAKQIPAG--FKYQNFTRLDDDVQVDWRQ 158

Query: 127 RGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSRGCYGGW 183
           +GAVTPVKNQG CGCCW FSAV A+EG+  I TG L+SLSEQQ+LDC    G++GC GG+
Sbjct: 159 QGAVTPVKNQGQCGCCWAFSAVGAMEGLIMITTGNLVSLSEQQILDCDESDGNQGCNGGY 218

Query: 184 MDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVS 242
           MD+AF Y++ + G+T E  YPY   +G C   +    AA I  +QD+P+  E AL  AV+
Sbjct: 219 MDNAFQYVVNNGGVTTEDAYPYSAVQGTC---QNVQPAATISGFQDLPSGDENALANAVA 275

Query: 243 RQPVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQN 300
            QPVSV +D  S  F++Y GG++ G  CG ++NHAVT +GYG+ ++G  YW++KNSWG  
Sbjct: 276 NQPVSVGVDGGSSPFQFYQGGIYDGDGCGTDMNHAVTAIGYGADDQGTQYWILKNSWGTG 335

Query: 301 WGEGGFIRMRRDVGGAGLCGIARKASYP 328
           WGE GF++++    G G CGI+  ASYP
Sbjct: 336 WGENGFMQLQM---GVGACGISTMASYP 360


>gi|50355623|dbj|BAD29960.1| cysteine protease [Daucus carota]
          Length = 460

 Score =  300 bits (768), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 145/317 (45%), Positives = 207/317 (65%), Gaps = 12/317 (3%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           +D I A +E W+ +  ++Y    EK  RF+IFK NF +I++ N   ++++KL LN FADL
Sbjct: 37  DDVIMAAYESWLVKHGKSYNALGEKEQRFQIFKDNFLYIDEQNAAKDRSFKLGLNRFADL 96

Query: 79  TDEEFIASHTGYKMPT--RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQ 136
           T+EE+ + +TG +     + +S +SQ YA+       +   LP S+DWR  GAV  VK+Q
Sbjct: 97  TNEEYRSKYTGIRTKDSRKKVSGKSQRYASL------AGESLPESVDWREHGAVASVKDQ 150

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRS 194
           G CG CW FS ++AVEGI +I TG+LI+LSEQ+++DC  S   GC GG MDDAF +II +
Sbjct: 151 GQCGSCWAFSTISAVEGINQIATGKLITLSEQELVDCDRSYNEGCNGGLMDDAFQFIINN 210

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDAS 253
            G+  +  YPY  R+G C+  R   K   I SY+DVP   E AL+ A + QP+SVAI+AS
Sbjct: 211 GGIDSDADYPYTGRDGQCDQYRKNAKVVTIDSYEDVPEYDEKALQKAAANQPISVAIEAS 270

Query: 254 SPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV 313
              F++Y  G+F G CG +L+H V +VGYG+ N   YW+++NSWG +WGE G++RM R +
Sbjct: 271 GRDFQFYDSGIFTGKCGTDLDHGVVVVGYGTENGKDYWIVRNSWGADWGEKGYLRMERGI 330

Query: 314 GG-AGLCGIARKASYPI 329
              AG+CGI  + SYP+
Sbjct: 331 SSKAGICGITSEPSYPV 347


>gi|400180367|gb|AFP73322.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  300 bits (768), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 150/332 (45%), Positives = 214/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKVERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +II + G++ E  Y Y   +  C  Q     A +I SY+ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIIENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYKVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  AGLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDYGNPAGLCDIAKMSSYP 341


>gi|400180359|gb|AFP73318.1| cysteine protease [Solanum peruvianum]
 gi|400180477|gb|AFP73375.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  300 bits (768), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 151/332 (45%), Positives = 214/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + S   +R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNSQTRARSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +I  + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  AGLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDYGNPAGLCDIAKMSSYP 341


>gi|400180355|gb|AFP73316.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  300 bits (768), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 150/332 (45%), Positives = 214/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +II + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIIENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGNPSGLCDIAKMSSYP 341


>gi|30141027|dbj|BAC75927.1| cysteine protease-5 [Helianthus annuus]
          Length = 365

 Score =  300 bits (768), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 151/324 (46%), Positives = 205/324 (63%), Gaps = 7/324 (2%)

Query: 12  VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLS 71
           V S T  ++ +   +ELW+A+  +TY    EK  RF+IF  N +FI++ N  GN++YK+ 
Sbjct: 22  VTSNTRTDEEVRNTYELWLARHGKTYNALGEKESRFRIFADNLKFIDEHNLSGNRSYKVG 81

Query: 72  LNEFADLTDEEFIASHTGYKM-PTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAV 130
           LN+FADLT+EE+ + + G K+ P R I+   +   +  +   ++    P  +DWR RGAV
Sbjct: 82  LNQFADLTNEEYRSMYLGTKVDPYRRIAKMQRGEISRRYAVQENEM-FPAKVDWRERGAV 140

Query: 131 TPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAF 188
           +PVKNQG CG CW FS VA+VEGI KI TG LISLSEQ+++DC    + GC GG MD AF
Sbjct: 141 SPVKNQGGCGSCWAFSTVASVEGINKIVTGDLISLSEQELVDCDNKYNSGCNGGSMDYAF 200

Query: 189 SYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVS 247
            +I+ + G+  E  YPY+     C+  R   K   I  Y+DV P +E AL  AV+ QPVS
Sbjct: 201 QFIVSNGGIDSESDYPYKGVGAVCDPVRNKAKIVSIDGYEDVPPMNEKALMKAVAHQPVS 260

Query: 248 VAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFI 307
           V I+AS   F+ Y+ GV  G CG NL+H V +VGYGS N   YW+++NSWG  WGE G+I
Sbjct: 261 VGIEASGRAFQLYTSGVLTGSCGTNLDHGVVVVGYGSENGKDYWIVRNSWGPEWGEDGYI 320

Query: 308 RMRRDV--GGAGLCGIARKASYPI 329
           RM R++     G+CGI   ASYPI
Sbjct: 321 RMERNMVDTPVGMCGITLMASYPI 344


>gi|226504984|ref|NP_001151293.1| cysteine protease 1 precursor [Zea mays]
 gi|195645596|gb|ACG42266.1| cysteine protease 1 precursor [Zea mays]
          Length = 340

 Score =  300 bits (768), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 158/311 (50%), Positives = 211/311 (67%), Gaps = 11/311 (3%)

Query: 24  AKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEF 83
           ++HE WMA+  R YK++AEKA R ++F+ N   I+ FN  G  +++L+ N FADLT +EF
Sbjct: 36  SRHEKWMAEHGRAYKDEAEKARRLEVFRANAELIDSFNAAGTHSHRLATNRFADLTVQEF 95

Query: 84  IASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCW 143
            A+ TG + P    S  +  +    F   D+     +S+DWRA GAVT VK+QG+ GCCW
Sbjct: 96  RAARTGLR-PRPAPSAGAGRFRYENFSLADA----AQSVDWRAMGAVTGVKDQGASGCCW 150

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---RGCYGGWMDDAFSYIIRSQGLTDE 200
            FSAVAAVEG+ KIRTGRL+SLSEQ+++DC  S   +GC GG MD+AF ++ R  GL  E
Sbjct: 151 AFSAVAAVEGLNKIRTGRLVSLSEQELVDCDVSGVDQGCDGGLMDNAFQFVARRGGLASE 210

Query: 201 RVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRY 259
             YPYQ R+G C     A  AA IR ++DVP  +E AL  AV+ QPVSVAI+     FR+
Sbjct: 211 SGYPYQCRDGPCR-SSAAAAAASIRGHEDVPRNNEAALAAAVAHQPVSVAINGEDMAFRF 269

Query: 260 YSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRDVGGAGL 318
           Y  GV  G CG +LNHA+T VGYG++ +G  YWL+KNSWG +WGEGG++R+RR V G G+
Sbjct: 270 YDSGVLGGACGTDLNHAITAVGYGTAADGTRYWLMKNSWGASWGEGGYVRIRRGVRGEGV 329

Query: 319 CGIARKASYPI 329
           CG+A+  SYP+
Sbjct: 330 CGLAKLPSYPV 340


>gi|400180453|gb|AFP73363.1| cysteine protease [Solanum chilense]
          Length = 344

 Score =  300 bits (768), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 150/332 (45%), Positives = 215/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +   +R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRARSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPVSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +II + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIIENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGNPSGLCDIAKMSSYP 341


>gi|400180437|gb|AFP73356.1| cysteine protease [Solanum pennellii]
          Length = 337

 Score =  300 bits (768), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 151/331 (45%), Positives = 214/331 (64%), Gaps = 13/331 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +   S S  N+      S   +P 
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYL---SPSPINDL-----SDDDMPS 125

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-GC 179
           ++DWR  GAVT VKNQG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  GC
Sbjct: 126 NLDWRESGAVTQVKNQGQCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGC 185

Query: 180 YGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRY 239
            GG+M +AF +I  + G++ E  Y Y  ++  C  Q     A +I SYQ VP  E +L  
Sbjct: 186 NGGFMTNAFDFIKENGGISRESDYEYLGQQYTCRSQE-KTAAVQISSYQVVPEGETSLLQ 244

Query: 240 AVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWG 298
           AV++QPVS+ I A+S   ++Y+GG + G C N +NHAVT +GYG+  +G  YWL+KNSWG
Sbjct: 245 AVTKQPVSIGI-AASQDLQFYAGGTYDGSCANRINHAVTAIGYGTDEKGQKYWLLKNSWG 303

Query: 299 QNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
            +WGE GF+++ RD G  AGLC IA+ +SYP
Sbjct: 304 TSWGEDGFMKIIRDSGNPAGLCDIAKVSSYP 334


>gi|400180347|gb|AFP73312.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  300 bits (768), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 150/332 (45%), Positives = 215/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +II + G++ E  Y Y  ++  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CDGGFMTNAFDFIIENGGISRESDYEYLGQQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGNPSGLCDIAKMSSYP 341


>gi|326502440|dbj|BAJ95283.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 349

 Score =  300 bits (768), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 164/318 (51%), Positives = 215/318 (67%), Gaps = 12/318 (3%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           + ++ ++HE WMA+  RTY N+ EKA R ++F+ N + I+ FN   + T++L+ N FADL
Sbjct: 37  DSAMVSRHEKWMAEHGRTYANEEEKARRLEVFRANAKLIDSFNSAEDSTHRLATNRFADL 96

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRARGAVTPVKNQG 137
           TDEEF A+ TG + P    +          F Y + S      S+DWRA GAVT VK+QG
Sbjct: 97  TDEEFRAARTGLRRPPAAAAGAGSGAGG--FRYENFSLADAAGSMDWRAMGAVTGVKDQG 154

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRS 194
           SCGCCW FSAVAAVEG+TKIRTGRL+SLSEQQ++DC       GC GG MD+AF Y+I  
Sbjct: 155 SCGCCWAFSAVAAVEGLTKIRTGRLVSLSEQQLVDCDVYGDDEGCAGGLMDNAFEYMINR 214

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDAS 253
            GLT E  YPY+  +G C   R +  AA IR Y+DVP  +E AL  AV+ QPVSVAI+  
Sbjct: 215 GGLTTESSYPYRGTDGSC---RRSASAASIRGYEDVPANNEAALMAAVAHQPVSVAINGG 271

Query: 254 SPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRR 311
              FR+Y  GV  G  CG  LNHA+T VGYG++++G  YW++KNSWG +WGEGG++R+RR
Sbjct: 272 DSVFRFYDSGVLGGSGCGTELNHAITAVGYGTASDGTKYWIMKNSWGGSWGEGGYVRIRR 331

Query: 312 DVGGAGLCGIARKASYPI 329
            V G G+CG+A+ ASYP+
Sbjct: 332 GVRGEGVCGLAQLASYPV 349


>gi|20334375|gb|AAM19208.1|AF493233_1 cysteine protease [Solanum pennellii]
          Length = 337

 Score =  300 bits (767), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 151/331 (45%), Positives = 214/331 (64%), Gaps = 13/331 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +   S S  N+      S   +P 
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYL---SPSPINDL-----SDDDMPS 125

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-GC 179
           ++DWR  GAVT VKNQG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  GC
Sbjct: 126 NLDWRESGAVTQVKNQGQCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGC 185

Query: 180 YGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRY 239
            GG+M +AF +I  + G++ E  Y Y  ++  C  Q     A +I SYQ VP  E +L  
Sbjct: 186 NGGFMTNAFDFIKENGGISRESDYEYLGQQYTCRSQE-KTAAVQISSYQVVPEGETSLLQ 244

Query: 240 AVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWG 298
           AV++QPVS+ I A+S   ++Y+GG + G C N +NHAVT +GYG+  +G  YWL+KNSWG
Sbjct: 245 AVTKQPVSIGI-AASQDLQFYAGGTYDGSCANRINHAVTAIGYGTDEKGQKYWLLKNSWG 303

Query: 299 QNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
            +WGE GF+++ RD G  AGLC IA+ +SYP
Sbjct: 304 TSWGEDGFMKIIRDSGNPAGLCDIAKVSSYP 334


>gi|400180426|gb|AFP73351.1| cysteine protease [Solanum corneliomuelleri]
          Length = 344

 Score =  300 bits (767), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 150/332 (45%), Positives = 214/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +II + G++ E  Y Y  ++  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIIENGGISRESDYEYLGQQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+   G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDENGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGNPSGLCDIAKMSSYP 341


>gi|400180445|gb|AFP73359.1| cysteine protease, partial [Solanum chilense]
          Length = 345

 Score =  300 bits (767), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 150/332 (45%), Positives = 214/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  E S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPELSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +I  + G++ E  Y Y  ++  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CDGGFMTNAFDFIKENGGISSESDYEYLGQQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGDPSGLCDIAKMSSYP 341


>gi|400180451|gb|AFP73362.1| cysteine protease [Solanum chilense]
          Length = 344

 Score =  300 bits (767), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 150/332 (45%), Positives = 214/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  E S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPELSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +I  + G++ E  Y Y  ++  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CDGGFMTNAFDFIKENGGISSESDYEYLGQQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGDPSGLCDIAKMSSYP 341


>gi|255568345|ref|XP_002525147.1| cysteine protease, putative [Ricinus communis]
 gi|223535606|gb|EEF37274.1| cysteine protease, putative [Ricinus communis]
          Length = 347

 Score =  300 bits (767), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 158/342 (46%), Positives = 216/342 (63%), Gaps = 22/342 (6%)

Query: 1   MLIIMVT-WASLVMSRTLHEDSISA-------KHELWMAQSARTYKNQAEKAMRFKIFKK 52
           MLI + T W   +    +H   I +       +++ W+ Q  R Y  + E  +RF I+  
Sbjct: 13  MLITLCTLWIPSIARSEIHSLPIDSAPTAMKVRYDKWLEQYGRKYDTKDEYLLRFGIYHS 72

Query: 53  NFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYP 112
           N +FIE  N + N ++KL+ N+FADLT++EF + + GY++ +    N S  + N+     
Sbjct: 73  NIQFIEYINSQ-NLSFKLTDNKFADLTNDEFNSIYLGYQIRSYKRRNLSHMHENS----- 126

Query: 113 DSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLD 172
                LP ++DWR  GAVTP+K+QG CG CW FSAVAAVEGI KI+TG L+SLSEQ+++D
Sbjct: 127 ---TDLPDAVDWRENGAVTPIKDQGQCGSCWAFSAVAAVEGINKIKTGNLVSLSEQELVD 183

Query: 173 CS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQD 229
           C     ++GC GG+M+ AF++I    GLT E  YPY+  +G C   +    A  I  Y+ 
Sbjct: 184 CDVNGDNKGCNGGFMEKAFTFIKSIGGLTTENDYPYKGTDGSCEKAKTDNHAVIIGGYET 243

Query: 230 VP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG 288
           VP  +E +L+ AVS+QPVSVAIDAS   F+ YS GVF+G CG  LNH VTIVGYG +N  
Sbjct: 244 VPANNENSLKVAVSKQPVSVAIDASGYEFQLYSEGVFSGYCGIQLNHGVTIVGYGDNNGQ 303

Query: 289 PYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPI 329
            YWL+KNSWG+ WGE G+IRM+RD     G+CGIA + SYPI
Sbjct: 304 KYWLVKNSWGKGWGESGYIRMKRDSSDTKGMCGIAMEPSYPI 345


>gi|400180467|gb|AFP73370.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  299 bits (766), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 150/332 (45%), Positives = 214/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +   +R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRARSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +I  + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  AGLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDYGNPAGLCDIAKMSSYP 341


>gi|224083868|ref|XP_002307151.1| predicted protein [Populus trichocarpa]
 gi|222856600|gb|EEE94147.1| predicted protein [Populus trichocarpa]
          Length = 298

 Score =  299 bits (766), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 154/311 (49%), Positives = 201/311 (64%), Gaps = 21/311 (6%)

Query: 25  KHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFI 84
           +HE WMAQ  R YK+ AEK  R+ IFK+N   I+ FN +  ++Y L +N+FADL++EEF 
Sbjct: 4   RHEQWMAQYGRVYKDDAEKETRYNIFKENVARIDAFNSQTGKSYNLGVNQFADLSNEEFK 63

Query: 85  ASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWI 144
           AS   +K    +       Y N           +P ++DWR +GAVTPVK+QG C     
Sbjct: 64  ASRNRFKGHMCSPQAGPFRYEN--------VSAVPATMDWRKKGAVTPVKDQGQC----- 110

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYGGWMDDAFSYIIRSQGLTDER 201
              VAA+EGI ++ TG+LISLSEQ+V+DC      +GC GG MDDAF +I +++GLT E 
Sbjct: 111 ---VAAMEGINQLTTGKLISLSEQEVVDCDTKGEDQGCNGGLMDDAFKFIEQNKGLTTEA 167

Query: 202 VYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYY 260
            YPY   +G CN Q+    AA+I  +QDVP  SE AL  AV++QPVSVAIDA    F++Y
Sbjct: 168 NYPYTGTDGTCNTQKEVSHAAKITGFQDVPANSEAALMKAVAKQPVSVAIDAGGFEFQFY 227

Query: 261 SGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLC 319
           S G+F G CG  L+H VT VGYG S+   YWL+KNSWG  WGE G+IRM++D+    GLC
Sbjct: 228 SSGIFTGSCGTELDHGVTAVGYGGSDGTKYWLVKNSWGAQWGEEGYIRMQKDISAKEGLC 287

Query: 320 GIARKASYPIA 330
           GIA +ASYP A
Sbjct: 288 GIAMQASYPTA 298


>gi|358248896|ref|NP_001239703.1| uncharacterized protein LOC100799247 precursor [Glycine max]
 gi|255636729|gb|ACU18700.1| unknown [Glycine max]
          Length = 341

 Score =  299 bits (765), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 155/330 (46%), Positives = 214/330 (64%), Gaps = 15/330 (4%)

Query: 8   WASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQT 67
           W S VMSR L     S +HE WMAQ  + YK+ AEK  RF++FK N +FIE FN  G++ 
Sbjct: 20  WISRVMSRGL---ITSERHEKWMAQYGKVYKDAAEKEKRFQVFKNNVQFIESFNAAGDKP 76

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           + LS+N+FADL DEEF A     +     +   +++     F Y +  + +P ++DWR R
Sbjct: 77  FNLSINQFADLHDEEFKALLNNVQKKASRVETATETS----FRYENVTK-IPSTMDWRKR 131

Query: 128 GAVTPVKNQG-SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRGCYGGWM 184
           GAVTP+K+QG +CG CW F+ VA VE + +I TG L+SLSEQ+++DC    S GC GG++
Sbjct: 132 GAVTPIKDQGYTCGSCWAFATVATVESLHQITTGELVSLSEQELVDCVRGDSEGCRGGYV 191

Query: 185 DDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR 243
           ++AF +I    G+T E  YPY+ ++  C  ++     ARI  Y+ VP+ SE AL  AV+ 
Sbjct: 192 ENAFEFIANKGGITSEAYYPYKGKDRSCKVKKETHGVARIIGYESVPSNSEKALLKAVAN 251

Query: 244 QPVSVAIDASSPGFRYYSGGVF-AGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNW 301
           QPVSV IDA +  F++YS G+F A  CG +L+HAV +VGYG   +G  YWL+KNSW   W
Sbjct: 252 QPVSVYIDAGAIAFKFYSSGIFEARNCGTHLDHAVAVVGYGKLRDGTKYWLVKNSWSTAW 311

Query: 302 GEGGFIRMRRDV-GGAGLCGIARKASYPIA 330
           GE G++R++RD+    GLCGIA  ASYPIA
Sbjct: 312 GEKGYMRIKRDIRAKKGLCGIASNASYPIA 341


>gi|400180419|gb|AFP73348.1| cysteine protease [Solanum lycopersicoides]
          Length = 343

 Score =  299 bits (765), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 151/332 (45%), Positives = 214/332 (64%), Gaps = 9/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + S   +R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNSQTTARSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T EEF+   TG  +P+  +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGINEFADITSEEFLTKFTGINIPSY-LSPSPMSSTE--FKINDLSDDDMP 130

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VKNQG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 131 SNLDWRESGAVTQVKNQGQCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 190

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +I  + G++ E  Y YQ ++  C  Q     A +I SYQ VP  E +L 
Sbjct: 191 CNGGFMTNAFDFIKENGGISSESDYEYQGQQYTCRSQE-KTAAVQISSYQVVPEGETSLL 249

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 250 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 308

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G   G C IA+ +SYP
Sbjct: 309 GTSWGENGFMKIIRDSGNPGGHCDIAKMSSYP 340


>gi|2463586|dbj|BAA22545.1| FB22 precursor [Ananas comosus]
          Length = 340

 Score =  299 bits (765), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 154/331 (46%), Positives = 204/331 (61%), Gaps = 10/331 (3%)

Query: 1   MLIIMVTWASL-VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
            L + V WAS    SR    D +  + E WMA+  R YK+  EK  RF+IFK N   IE 
Sbjct: 11  FLFLCVMWASPSAASRDEPSDPMMKRFEEWMAEYGRVYKDNDEKMRRFQIFKNNVNHIET 70

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLP 119
           FN     +Y L +N+F D+T+ EF+  +TG  +P         S+ +       +   + 
Sbjct: 71  FNNRNGNSYTLGINKFTDMTNNEFVTQYTGVSLPLNFKREPVVSFDDV------NISAVG 124

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRGC 179
           +SIDWR  GAVT VK+Q  CG CW FSA+A VEGI KI TG L+SLSEQ+VLDC+ S GC
Sbjct: 125 QSIDWRDYGAVTEVKDQNPCGSCWAFSAIATVEGIYKIVTGYLVSLSEQEVLDCAVSNGC 184

Query: 180 YGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALR 238
            GG++D+A+ +II + G+  E  YPYQ  EG C        +A I  Y  V    E +++
Sbjct: 185 DGGFVDNAYDFIISNNGVASEADYPYQAYEGDCT-ANSWPNSAYITGYSYVRSNDESSMK 243

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSW 297
           YAV  QP++ AIDAS   F+YY+GGVF+GPCG +LNHA+TI+GYG  + G  YW++KNSW
Sbjct: 244 YAVWNQPIAAAIDASGDNFQYYNGGVFSGPCGTSLNHAITIIGYGQDSSGTQYWIVKNSW 303

Query: 298 GQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           G +WGE G++RM R V  +GLCGIA    YP
Sbjct: 304 GSSWGERGYVRMARGVSSSGLCGIAMDPLYP 334


>gi|146215986|gb|ABQ10195.1| actinidin Act2d [Actinidia eriantha]
          Length = 381

 Score =  299 bits (765), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 146/333 (43%), Positives = 211/333 (63%), Gaps = 14/333 (4%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L+I+ +   +  S     D + A +E W+ +  ++Y +  EK MRF+IFK+N R I+  N
Sbjct: 20  LLILSSALDIKNSVQRTNDQVMAMYESWLVEQGKSYNSLDEKEMRFEIFKENLRIIDDHN 79

Query: 62  REGNQTYKLSLNEFADLTDEEFIASHTGYKM-PTRNISNQSQSYANNWFGYPDSRRGLPR 120
            + N++Y L LN FADLTDEE+ +++ G+K  P   +SN+           P     LP 
Sbjct: 80  ADANRSYSLGLNRFADLTDEEYRSTYLGFKSGPKAKVSNRY---------VPKVGVVLPN 130

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSR 177
            +DWR  GAV  VK+QG C  CW FSAVAAVEGI KI TG LISLSEQ+++DC     +R
Sbjct: 131 YVDWRTVGAVVGVKDQGLCSSCWAFSAVAAVEGINKIVTGNLISLSEQELVDCGRTQRTR 190

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELA 236
           GC  G+M+DAF +II + G+  E  YPY  ++G C+W R   +   I +Y+ +P  +E  
Sbjct: 191 GCNRGYMNDAFQFIIDNGGINTEDNYPYTAQDGQCDWYRKNQRYVTIDNYEQLPANNEWV 250

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNS 296
           L+ AV+ QP++V +++    F+ Y+ G++ G CG  ++H VTIVGYG+     YW++KNS
Sbjct: 251 LQNAVAYQPITVGLESEGGKFKLYTSGIYTGYCGTAIDHGVTIVGYGTERGLDYWIVKNS 310

Query: 297 WGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           WG NWGE G+IR++R++GGAG CGIA   SYP+
Sbjct: 311 WGTNWGENGYIRIQRNIGGAGKCGIAMVPSYPV 343


>gi|242070333|ref|XP_002450443.1| hypothetical protein SORBIDRAFT_05g005530 [Sorghum bicolor]
 gi|241936286|gb|EES09431.1| hypothetical protein SORBIDRAFT_05g005530 [Sorghum bicolor]
          Length = 351

 Score =  299 bits (765), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 158/320 (49%), Positives = 214/320 (66%), Gaps = 21/320 (6%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE-GNQTYKLSLNEFAD 77
           E++++A+HE WM +  RTYK++AEKA RF++FK N  F++  N   G + Y L++N FAD
Sbjct: 45  EEAMTARHEKWMVEHGRTYKDEAEKARRFQVFKANAAFVDTSNAAAGGKKYHLAINRFAD 104

Query: 78  LTDEEFIASHTGYK-MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQ 136
           +T +EF+A +TG+K +P          YAN      D +     ++DWR +GAVT VKNQ
Sbjct: 105 MTHDEFMARYTGFKPLPATGKKMPGFKYANVTLSSEDQQ-----AVDWRKKGAVTDVKNQ 159

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIR 193
             CGCCW FSAVAA+EG+ +I TG L+SLSEQQ++DCS    + GC GG M+DAF Y+I 
Sbjct: 160 QKCGCCWAFSAVAAIEGMHQINTGELVSLSEQQLVDCSTNGNNNGCGGGTMEDAFQYVIG 219

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDA 252
           + G+  E  YPY   +G C   +    A  +RSYQ VP   E AL  AV+ QPVSVA+DA
Sbjct: 220 NNGIATEAAYPYTAMQGMC---QNVQPAVAVRSYQQVPRDDEDALAAAVAGQPVSVAVDA 276

Query: 253 SSPGFRYYSGGVF-AGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMR 310
           ++  F++Y GGV  A  CG NLNHAVT VGYG++ +G PYWL+KN WG  WGE G++R++
Sbjct: 277 NN--FQFYKGGVMTADSCGTNLNHAVTAVGYGTAEDGTPYWLLKNQWGSTWGEEGYLRLQ 334

Query: 311 RDVGGAGLCGIARKASYPIA 330
           R   G G CG+A+ ASYP+A
Sbjct: 335 R---GVGACGVAKDASYPVA 351


>gi|400180365|gb|AFP73321.1| cysteine protease [Solanum peruvianum]
 gi|400180395|gb|AFP73336.1| cysteine protease [Solanum peruvianum]
 gi|400180405|gb|AFP73341.1| cysteine protease [Solanum peruvianum]
 gi|400180409|gb|AFP73343.1| cysteine protease [Solanum peruvianum]
 gi|400180411|gb|AFP73344.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  299 bits (765), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 149/332 (44%), Positives = 215/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +II + G++ E  Y Y  ++  C  Q     A +I SY+ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIIENGGISRESDYEYLGQQYTCRSQE-KTAAVQISSYKVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGNPSGLCDIAKMSSYP 341


>gi|89274062|dbj|BAE80740.1| cysteine proteinase [Platycodon grandiflorus]
          Length = 462

 Score =  298 bits (764), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 146/316 (46%), Positives = 201/316 (63%), Gaps = 11/316 (3%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           +D + A +E W+ +  ++Y    EK  RF+IFK N RFI++ N E N +YK+ LN FADL
Sbjct: 43  DDEVMAMYESWLVKHGKSYNALGEKEKRFQIFKDNLRFIDEHNAEENLSYKVGLNRFADL 102

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
           T+EE+ +++ G K   +    +S  YA      P     LP S+DWRA+GAV P+K+QGS
Sbjct: 103 TNEEYRSTYLGAKSKPKLSKVKSDRYA------PRVGDSLPESVDWRAKGAVAPIKDQGS 156

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQG 196
           CG CW FS V AVEGI +I TG LI+LSEQ+++DC  S   GC GG MD  F +II + G
Sbjct: 157 CGSCWAFSTVNAVEGINQIVTGELITLSEQELVDCDKSYNEGCDGGLMDYGFEFIINNGG 216

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSP 255
           +  ++ YPY  R+  C+  R   K   I SY+DVP + E AL+ AV+ QPVSV I+    
Sbjct: 217 IDTDKDYPYLGRDARCDQYRKNAKVVTIDSYEDVPVNNEEALKKAVASQPVSVGIEGGGR 276

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG 315
            F++Y  G+F G CG  L+H V +VGYG+     YW+++NSWG +WGE G+IRM R++ G
Sbjct: 277 AFQFYDSGIFTGKCGTALDHGVNVVGYGTEKGKDYWIVRNSWGSSWGEAGYIRMERNLAG 336

Query: 316 --AGLCGIARKASYPI 329
              G CGIA + SYP+
Sbjct: 337 TSVGKCGIAMEPSYPL 352


>gi|218202087|gb|EEC84514.1| hypothetical protein OsI_31214 [Oryza sativa Indica Group]
          Length = 348

 Score =  298 bits (764), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 153/334 (45%), Positives = 216/334 (64%), Gaps = 21/334 (6%)

Query: 1   MLIIMVTWASLVMSRTLHEDS-ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           +L  +   ++++ +R L +D+ ++A+HE WMAQ  R YK+ AEKA RF++FK N  FIE 
Sbjct: 11  ILGCLCLCSAVLAARELSDDAAMAARHERWMAQYGRMYKDDAEKARRFEVFKANAAFIES 70

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHT--GYKMPTRNISNQSQSYANNWFGYPDSR-R 116
           FN  GN  + L +N+FADLT++EF  + T  G+   T  +           F Y +    
Sbjct: 71  FN-AGNHKFWLGVNQFADLTNDEFRLTKTNKGFIPSTTRVPTG--------FRYENVNID 121

Query: 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-- 174
            LP ++DWR +G VTP+K+QG CGCCW FSAVAA+EGI K+ TG+LISLSEQ+++DC   
Sbjct: 122 ALPATMDWRTKGVVTPIKDQGQCGCCWAFSAVAAMEGIVKLSTGKLISLSEQELVDCDVH 181

Query: 175 -GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-T 232
              +GC GG MDDAF +II++ GLT E  YPY   +  C  +  +   A I+ Y+DVP  
Sbjct: 182 GEDQGCEGGLMDDAFKFIIKNGGLTTESNYPYAAADDKC--KSVSNSVASIKGYEDVPAN 239

Query: 233 SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YW 291
           +E AL  AV+ QPVSVA+D     F++Y GGV  G CG +L+H +  +GYG +++G  YW
Sbjct: 240 NEAALMKAVANQPVSVAVDGDDMTFQFYKGGVMIGSCGTDLDHGIVAIGYGKASDGTKYW 299

Query: 292 LIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARK 324
           L+KNSWG  WGE GF+RM +D+    G+CG+A +
Sbjct: 300 LLKNSWGMTWGENGFLRMEKDISDKRGMCGLAME 333


>gi|400180403|gb|AFP73340.1| cysteine protease [Solanum peruvianum]
 gi|400180413|gb|AFP73345.1| cysteine protease [Solanum peruvianum]
 gi|400180415|gb|AFP73346.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  298 bits (764), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 150/332 (45%), Positives = 213/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +I  + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  AGLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGNPAGLCDIAKMSSYP 341


>gi|400180351|gb|AFP73314.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  298 bits (764), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 150/332 (45%), Positives = 213/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +I  + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  AGLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDYGNPAGLCDIAKMSSYP 341


>gi|400180389|gb|AFP73333.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  298 bits (764), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 149/332 (44%), Positives = 214/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +II + G++ E  Y Y   +  C  Q     A +I SY+ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIIENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYKVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGNPSGLCDIAKMSSYP 341


>gi|400180383|gb|AFP73330.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  298 bits (764), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 147/331 (44%), Positives = 215/331 (64%), Gaps = 6/331 (1%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S +  +     S   +P 
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS-STEFIINDLSDDDMPS 132

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-GC 179
           ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  GC
Sbjct: 133 NLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGC 192

Query: 180 YGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRY 239
            GG+M +AF +II + G++ E  Y Y  ++  C  Q     A +I SY+ VP  E +L  
Sbjct: 193 NGGFMTNAFDFIIENGGISRESDYEYLGQQYTCRSQE-KTAAVQISSYKVVPEGETSLLQ 251

Query: 240 AVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWG 298
           AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSWG
Sbjct: 252 AVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWG 310

Query: 299 QNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
            +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 311 TSWGENGFMKIIRDSGNPSGLCDIAKMSSYP 341


>gi|312451845|gb|ADQ85986.1| actinidin [Actinidia chinensis]
          Length = 380

 Score =  298 bits (764), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 148/333 (44%), Positives = 216/333 (64%), Gaps = 12/333 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +LI+ + + +  +++  + D + A +E W+ +  ++Y +  E   RF+IFK+  RFI++ 
Sbjct: 18  LLILSLAFNAKNLTQRTN-DEVKAMYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEH 76

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N + N++YK+ LN+FADLTDEEF +++ G+   + N +  S  Y       P   + LP 
Sbjct: 77  NADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGS-NKTKVSNRYE------PRVGQVLPS 129

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSR 177
            +DWR+ GAV  +K+QG CG CW FSA+A VEGI KI TG LISLSEQ+++DC     +R
Sbjct: 130 YVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTR 189

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELA 236
           GC G ++ D F +II + G+  E  YPY  ++G CN      K   I +Y++VP  +E A
Sbjct: 190 GCNGSYITDGFPFIINNGGINTEENYPYTAQDGECNVDLQNEKYVTIDTYENVPYNNEWA 249

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNS 296
           L+ AV+ QPVSVA+DA+   F+ YS G+F GPCG  ++HAVTIVGYG+     YW++KNS
Sbjct: 250 LQTAVTYQPVSVALDAAGDAFKQYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDYWIVKNS 309

Query: 297 WGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           W   WGE G++R+ R+VGGAG CGIA   SYP+
Sbjct: 310 WDTTWGEEGYMRILRNVGGAGTCGIATMPSYPV 342


>gi|226508570|ref|NP_001141984.1| uncharacterized protein LOC100274134 precursor [Zea mays]
 gi|194706676|gb|ACF87422.1| unknown [Zea mays]
 gi|413920745|gb|AFW60677.1| vignain [Zea mays]
          Length = 363

 Score =  298 bits (763), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 155/327 (47%), Positives = 208/327 (63%), Gaps = 14/327 (4%)

Query: 10  SLVMSRTLHEDS--ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQT 67
           S  + RT   D   + A+++ WMAQ  R YK+ AEKA RF++FK N  FI++ N  G + 
Sbjct: 41  STTVGRTTGGDEAMMMARYKKWMAQYRRKYKDDAEKAHRFQVFKANAEFIDRSNAGGKKK 100

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           Y L  N+FADLT +EF A +TG + P    S   Q  A        +R      +DWR +
Sbjct: 101 YVLGTNQFADLTSKEFAAMYTGLRKPAAVPSGAKQIPAAGSKYQNFTRLDDDVQVDWRQQ 160

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSRGCYGGWM 184
           GAVTPVKNQG CGCCW FSAV A+EG+  I TG L+SLSEQQ+LDC    G++GC GG+M
Sbjct: 161 GAVTPVKNQGQCGCCWAFSAVGAMEGLIMITTGNLVSLSEQQILDCDESDGNQGCNGGYM 220

Query: 185 DDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR 243
           D+AF Y+I + G+T E  YPY   +G C   +    AA I  +QD+P+  E AL  AV+ 
Sbjct: 221 DNAFQYVINNGGVTTEDAYPYSAVQGTC---QNVQPAATISGFQDLPSGDENALANAVAN 277

Query: 244 QPVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNW 301
           QPVSV +D  S  F++Y GG++ G  CG ++NHAVT +GYG+ ++G  YW++KNSWG  W
Sbjct: 278 QPVSVGVDGGSSPFQFYQGGIYDGDGCGTDMNHAVTAIGYGADDQGTQYWILKNSWGTGW 337

Query: 302 GEGGFIRMRRDVGGAGLCGIARKASYP 328
           GE GF++++    G G CGI+  ASYP
Sbjct: 338 GENGFMQLQM---GVGACGISTMASYP 361


>gi|400180461|gb|AFP73367.1| cysteine protease [Solanum peruvianum]
 gi|400180473|gb|AFP73373.1| cysteine protease [Solanum peruvianum]
 gi|400180475|gb|AFP73374.1| cysteine protease [Solanum peruvianum]
 gi|400180479|gb|AFP73376.1| cysteine protease [Solanum peruvianum]
 gi|400180481|gb|AFP73377.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  298 bits (763), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 148/331 (44%), Positives = 213/331 (64%), Gaps = 6/331 (1%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S +  +     S   +P 
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS-STEFIINDLSDDDMPS 132

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-GC 179
           ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  GC
Sbjct: 133 NLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGC 192

Query: 180 YGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRY 239
            GG+M +AF +I  + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L  
Sbjct: 193 NGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLLQ 251

Query: 240 AVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWG 298
           AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSWG
Sbjct: 252 AVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWG 310

Query: 299 QNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
            +WGE GF+++ RD G  AGLC IA+ +SYP
Sbjct: 311 TSWGENGFMKIIRDYGNPAGLCDIAKMSSYP 341


>gi|255567869|ref|XP_002524912.1| cysteine protease, putative [Ricinus communis]
 gi|223535747|gb|EEF37409.1| cysteine protease, putative [Ricinus communis]
          Length = 366

 Score =  298 bits (763), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 153/320 (47%), Positives = 210/320 (65%), Gaps = 15/320 (4%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           ++ + + +  W+A+ ++TY    E+  RF+IFK N RFI++ N   N+TYK+ L  FADL
Sbjct: 41  DNEVISMYNWWLAKHSKTYNKLGEREKRFEIFKNNLRFIDEHNNSKNRTYKVGLTRFADL 100

Query: 79  TDEEFIASHTGYKM-PTRNI---SNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVK 134
           T+EE+ A   G K  P R +    N SQ YA   F   D    LP SIDWR  GAV+ +K
Sbjct: 101 TNEEYRAKFLGTKSDPKRRLMKSKNPSQRYA---FKAGDV---LPESIDWRQSGAVSAIK 154

Query: 135 NQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYII 192
           +QGSCG CW FS +AAVEG+ KI TG LISLSEQ+++DC  S   GC GG MD+AF +II
Sbjct: 155 DQGSCGSCWAFSTIAAVEGVNKIVTGELISLSEQELVDCDRSYNAGCNGGLMDNAFQFII 214

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAID 251
            + G+  ++ YPYQ  +G C+  +   KA  I  ++DV    E+AL+ AV+ QPVSVAI+
Sbjct: 215 NNGGIDTDKDYPYQAVDGKCDTTKVKNKAVTIDGFEDVMAFDEMALQKAVAHQPVSVAIE 274

Query: 252 ASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRR 311
           AS    ++Y  GVF G CG+ L+H V IVGYG+ +   YWL++NSWG++WGE G+I+M+R
Sbjct: 275 ASGMALQFYQSGVFTGECGSALDHGVVIVGYGTEDGIDYWLVRNSWGRDWGENGYIKMQR 334

Query: 312 DVGG--AGLCGIARKASYPI 329
           +V     G CGIA ++SYPI
Sbjct: 335 NVVDTFTGKCGIAMESSYPI 354


>gi|400180373|gb|AFP73325.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  298 bits (763), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 149/332 (44%), Positives = 212/332 (63%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++    YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGHVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGQCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +I  + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CDGGFMTNAFDFIKENGGISSESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  AGLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGNPAGLCDIAKMSSYP 341


>gi|2224810|emb|CAB09698.1| cysteine proteinase [Hordeum vulgare subsp. vulgare]
          Length = 349

 Score =  298 bits (762), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 163/316 (51%), Positives = 213/316 (67%), Gaps = 12/316 (3%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTD 80
           ++ ++HE WMA+  RTY N+ EKA R ++F+ N + I+ FN   + T++L+ N FADLTD
Sbjct: 39  AMVSRHEKWMAEHGRTYANEEEKARRLEVFRANAKLIDSFNSAEDSTHRLATNRFADLTD 98

Query: 81  EEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRARGAVTPVKNQGSC 139
           EEF A+ TG + P    +          F Y + S      S+DWRA GAVT VK+QGSC
Sbjct: 99  EEFRAARTGLRRPPAAAAGAGSGAGG--FRYENFSLADAAGSMDWRAMGAVTGVKDQGSC 156

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQG 196
           GCCW FSAVAAVEG+TKIRTGRL+SLSEQQ++DC       GC GG MD+AF Y+I   G
Sbjct: 157 GCCWAFSAVAAVEGLTKIRTGRLVSLSEQQLVDCDVYGDDEGCAGGLMDNAFEYMINRGG 216

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSP 255
           LT E  YPY+  +G C   R +  AA IR Y+DVP  +E AL  AV+ QPVSVAI+    
Sbjct: 217 LTTESSYPYRGTDGSC---RRSASAASIRGYEDVPANNEAALMAAVAHQPVSVAINGGDS 273

Query: 256 GFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRDV 313
            FR+Y  GV  G  CG  LNHA+T  GYG++++G  YW++KNSWG +WGEGG++R+RR V
Sbjct: 274 VFRFYDSGVLGGSGCGTELNHAITAAGYGTASDGTKYWIMKNSWGGSWGEGGYVRIRRGV 333

Query: 314 GGAGLCGIARKASYPI 329
            G G+CG+A+ ASYP+
Sbjct: 334 RGEGVCGLAQLASYPV 349


>gi|20334377|gb|AAM19209.1|AF493234_1 cysteine protease [Solanum lycopersicum]
 gi|400180431|gb|AFP73353.1| cysteine protease [Solanum lycopersicum]
          Length = 345

 Score =  298 bits (762), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 148/331 (44%), Positives = 213/331 (64%), Gaps = 5/331 (1%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S          S   +P 
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTEFKKINDLSDDYMPS 133

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-GC 179
           ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  GC
Sbjct: 134 NLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGC 193

Query: 180 YGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRY 239
            GG+M +AF +II + G++ E  Y Y  ++  C  Q     A +I SYQ VP  E +L  
Sbjct: 194 NGGFMTNAFDFIIENGGISRESDYEYLGQQYTCRSQE-KTAAVQISSYQVVPEGETSLLQ 252

Query: 240 AVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWG 298
           AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  EG  YWL+KNSWG
Sbjct: 253 AVTKQPVSIGI-AASQDLQFYAGGTYDGNCADRINHAVTAIGYGTDEEGQKYWLLKNSWG 311

Query: 299 QNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
            +WGE G++++ RD G  +GLC IA+ +SYP
Sbjct: 312 TSWGENGYMKIIRDSGDPSGLCDIAKMSSYP 342


>gi|400180457|gb|AFP73365.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  298 bits (762), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 147/331 (44%), Positives = 214/331 (64%), Gaps = 6/331 (1%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S +  +     S   +P 
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS-STEFIINDLSDDDMPS 132

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-GC 179
           ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  GC
Sbjct: 133 NLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGC 192

Query: 180 YGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRY 239
            GG+M +AF +II + G++ E  Y Y   +  C  Q     A +I SY+ VP  E +L  
Sbjct: 193 NGGFMTNAFDFIIENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYKVVPEGETSLLQ 251

Query: 240 AVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWG 298
           AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSWG
Sbjct: 252 AVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWG 310

Query: 299 QNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
            +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 311 TSWGENGFMKIIRDSGNPSGLCDIAKMSSYP 341


>gi|20334373|gb|AAM19207.1|AF493232_1 cysteine protease [Solanum pimpinellifolium]
 gi|400180424|gb|AFP73350.1| cysteine protease [Solanum pimpinellifolium]
 gi|400180433|gb|AFP73354.1| cysteine protease [Solanum lycopersicum]
          Length = 344

 Score =  298 bits (762), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 150/332 (45%), Positives = 213/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDYMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG M +AF +II + G++ E  Y Y   +  C   R    A +I SY+ VP  E +L 
Sbjct: 192 CNGGLMTNAFDFIIENGGISRESDYEYLGEQYTCR-SREKTAAVQISSYKVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  EG  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGNCADQINHAVTAIGYGTDEEGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGDPSGLCDIAKMSSYP 341


>gi|400180379|gb|AFP73328.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  298 bits (762), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 149/332 (44%), Positives = 213/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVITMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +I  + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CDGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGNPSGLCDIAKMSSYP 341


>gi|190358935|sp|P00785.4|ACTN_ACTCH RecName: Full=Actinidain; Short=Actinidin; AltName: Allergen=Act c
           1; Flags: Precursor
 gi|12744965|gb|AAK06862.1|AF343446_1 actinidin protease [Actinidia chinensis]
          Length = 380

 Score =  298 bits (762), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 148/333 (44%), Positives = 218/333 (65%), Gaps = 12/333 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +LI+ + + +  +++  + D + A +E W+ +  ++Y +  E   RF+IFK+  RFI++ 
Sbjct: 18  LLILSLAFNAKNLTQRTN-DEVKAMYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEH 76

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N + N++YK+ LN+FADLTDEEF +++       R  S  +++  +N +  P   + LP 
Sbjct: 77  NADTNRSYKVGLNQFADLTDEEFRSTYL------RFTSGSNKTKVSNRYE-PRVGQVLPS 129

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSR 177
            +DWR+ GAV  +K+QG CG CW FSA+A VEGI KI TG LISLSEQ+++DC     +R
Sbjct: 130 YVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTR 189

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELA 236
           GC GG++ D F +II + G+  E  YPY  ++G CN      K   I +Y++VP  +E A
Sbjct: 190 GCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNVDLQNEKYVTIDTYENVPYNNEWA 249

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNS 296
           L+ AV+ QPVSVA+DA+   F+ YS G+F GPCG  ++HAVTIVGYG+     YW++KNS
Sbjct: 250 LQTAVTYQPVSVALDAAGDAFKQYSSGIFTGPCGTAVDHAVTIVGYGTEGGIDYWIVKNS 309

Query: 297 WGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           W   WGE G++R+ R+VGGAG CGIA   SYP+
Sbjct: 310 WDTTWGEEGYMRILRNVGGAGTCGIATMPSYPV 342


>gi|400180463|gb|AFP73368.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  298 bits (762), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 149/332 (44%), Positives = 214/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +   +R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRARSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +I  + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGDPSGLCDIAKMSSYP 341


>gi|2342494|dbj|BAA21848.1| bromelain [Ananas comosus]
 gi|2463582|dbj|BAA22543.1| FB31 precursor [Ananas comosus]
          Length = 352

 Score =  297 bits (761), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 157/335 (46%), Positives = 206/335 (61%), Gaps = 17/335 (5%)

Query: 1   MLIIMVTWASL-VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
            L + V WAS    SR    D +  + E WMA+  R YK+  EK  RF+IFK N   IE 
Sbjct: 11  FLFLCVMWASPSAASRDEPSDPMMKRFEEWMAEYGRVYKDNDEKMRRFQIFKNNVNHIET 70

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSR-RGL 118
           FN     +Y L +N+F D+T+ EF+A +TG      NI  +          + D     +
Sbjct: 71  FNNRNGNSYTLGINKFTDMTNNEFVAQYTGGISRPLNIEKEPV------VSFDDVNISAV 124

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRG 178
            +SIDWR  GAVT VK+Q  CG CW FSA+A VEGI KI TG L+SLSEQ+VLDC+ S G
Sbjct: 125 GQSIDWRDYGAVTEVKDQNPCGSCWAFSAIATVEGIYKIVTGYLVSLSEQEVLDCAVSNG 184

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYC---NWQRGAMKAARIRSYQDV-PTSE 234
           C GG++D+A+ +II + G+  E  YPYQ  +G C   +W      +A I  Y  V    E
Sbjct: 185 CDGGFVDNAYDFIISNNGVASEADYPYQAYQGDCAANSWP----NSAYITGYSYVRSNDE 240

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLI 293
            +++YAV  QP++ AIDAS   F+YY+GGVF+GPCG +LNHA+TI+GYG  + G  YW++
Sbjct: 241 SSMKYAVWNQPIAAAIDASGDNFQYYNGGVFSGPCGTSLNHAITIIGYGQDSSGTQYWIV 300

Query: 294 KNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           KNSWG +WGE G+IRM R V  +GLCGIA    YP
Sbjct: 301 KNSWGSSWGERGYIRMARGVSSSGLCGIAMDPLYP 335


>gi|400180407|gb|AFP73342.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  297 bits (761), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 149/332 (44%), Positives = 213/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKVERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +I  + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGNPSGLCDIAKMSSYP 341


>gi|400180381|gb|AFP73329.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  297 bits (760), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 148/332 (44%), Positives = 214/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +II + G++ E  Y Y  ++  C  Q     A +I SY+ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIIENGGISRESDYEYLGQQYTCRSQE-KTAAVQISSYKVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  +GLC I + +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGDPSGLCDITKMSSYP 341


>gi|400180455|gb|AFP73364.1| cysteine protease [Solanum peruvianum]
 gi|400180459|gb|AFP73366.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  297 bits (760), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 149/332 (44%), Positives = 213/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +I  + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGDPSGLCDIAKMSSYP 341


>gi|146215976|gb|ABQ10190.1| actinidin Act1b [Actinidia arguta]
          Length = 380

 Score =  297 bits (760), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 146/335 (43%), Positives = 218/335 (65%), Gaps = 16/335 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L++ + + +  +++  + D + A +E W+ +  ++Y +  E   RF+IFK+  RFI++ 
Sbjct: 18  LLVLSLAFNAKNLTKRTN-DELKAMYESWLTKYGKSYNSLGEWERRFEIFKETLRFIDEH 76

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRN--ISNQSQSYANNWFGYPDSRRGL 118
           N + N++Y++ LN+FAD T+EEF +++ G+   +    +SN+ +         P   + L
Sbjct: 77  NADTNRSYRVGLNQFADQTNEEFQSTYLGFTSGSNKMKVSNRYE---------PRVGQVL 127

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SG 175
           P  +DWR+ GAV  +K+QG CG CW FSA+A VEGI KI TG LISLSEQ+++DC     
Sbjct: 128 PDYVDWRSAGAVVDIKSQGQCGSCWAFSAIATVEGINKIVTGDLISLSEQELVDCGRTQN 187

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSE 234
           +RGC GG + D F +II + G+  E  YPY   +G CN      K A I +Y++VP  +E
Sbjct: 188 TRGCDGGSITDGFQFIINNGGINTEANYPYTAEDGQCNLDLQNEKYASIDTYENVPYNNE 247

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIK 294
            AL+ AV+ QPVSVA++A+   F++YS G+F GPCG  ++HAVTIVGYG+     YW++K
Sbjct: 248 WALQTAVAYQPVSVALEAAGDAFQHYSSGIFTGPCGTAVDHAVTIVGYGTEGGIDYWIVK 307

Query: 295 NSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           NSW   WGE G+IR+ R+VGGAG CGIA K SYP+
Sbjct: 308 NSWDTTWGEEGYIRILRNVGGAGTCGIATKPSYPV 342


>gi|400180371|gb|AFP73324.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  296 bits (759), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 147/331 (44%), Positives = 213/331 (64%), Gaps = 6/331 (1%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S +  +     S   +P 
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS-STEFIINDLSDDDMPS 132

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-GC 179
           ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  GC
Sbjct: 133 NLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGC 192

Query: 180 YGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRY 239
            GG+M +AF +I  + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L  
Sbjct: 193 NGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLLQ 251

Query: 240 AVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWG 298
           AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSWG
Sbjct: 252 AVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWG 310

Query: 299 QNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
            +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 311 TSWGENGFMKIIRDSGNPSGLCDIAKMSSYP 341


>gi|400180417|gb|AFP73347.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  296 bits (759), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 148/332 (44%), Positives = 215/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  VFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P  N        ++  F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIP--NSYLSPSPLSSTEFKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +II + G++ E  Y Y  ++  C  Q     A +I SY+ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIIENGGISRESDYEYLGQQYTCRSQE-KTAAVQISSYKVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGNPSGLCDIAKMSSYP 341


>gi|400180399|gb|AFP73338.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  296 bits (759), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 147/331 (44%), Positives = 213/331 (64%), Gaps = 6/331 (1%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S +  +     S   +P 
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS-STEFIINDLSDDDMPS 132

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-GC 179
           ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  GC
Sbjct: 133 NLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGC 192

Query: 180 YGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRY 239
            GG+M +AF +I  + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L  
Sbjct: 193 NGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLLQ 251

Query: 240 AVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWG 298
           AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSWG
Sbjct: 252 AVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWG 310

Query: 299 QNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
            +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 311 TSWGENGFMKIIRDSGDPSGLCDIAKMSSYP 341


>gi|400180393|gb|AFP73335.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  296 bits (759), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 148/332 (44%), Positives = 213/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKVERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S         D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--LKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +II + G++ E  Y Y   +  C  Q     A +I SY+ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIIENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYKVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGNPSGLCDIAKMSSYP 341


>gi|225458701|ref|XP_002284973.1| PREDICTED: cysteine proteinase RD21a-like [Vitis vinifera]
          Length = 467

 Score =  296 bits (759), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 157/318 (49%), Positives = 204/318 (64%), Gaps = 14/318 (4%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           ++ + A +E W+A+  ++Y    EK  RF+IFK N RFI++ N E N+TYK+ LN FADL
Sbjct: 44  DEDVMAVYEAWLAKHGKSYNALGEKERRFQIFKDNLRFIDEHNAE-NRTYKVGLNRFADL 102

Query: 79  TDEEFIASHTGYKMPTRNISNQ--SQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQ 136
           T+EE+ + + G +   +  S+   S  YA   F   DS   LP S+DWR +GAV  VK+Q
Sbjct: 103 TNEEYRSMYLGTRTAAKRRSSNKISDRYA---FRVGDS---LPESVDWRKKGAVVEVKDQ 156

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRS 194
           GSCG CW FS +AAVEGI KI TG LISLSEQ+++DC  S   GC GG MD AF +II +
Sbjct: 157 GSCGSCWAFSTIAAVEGINKIVTGGLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIINN 216

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDAS 253
            G+  E  YPY+  +G C+  R   K   I  Y+DVP   E +L  AV+ QPVSVAI+A 
Sbjct: 217 GGIDSEEDYPYKASDGRCDQYRKNAKVVTIDGYEDVPENDEKSLEKAVANQPVSVAIEAG 276

Query: 254 SPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV 313
              F+ Y  G+F G CG  L+H VT VGYG+ N   YW++KNSWG +WGE G+IRM RD+
Sbjct: 277 GREFQLYQSGIFTGRCGTALDHGVTAVGYGTENGVDYWIVKNSWGASWGEEGYIRMERDL 336

Query: 314 G--GAGLCGIARKASYPI 329
                G CGIA +ASYPI
Sbjct: 337 ATSATGKCGIAMEASYPI 354


>gi|400180391|gb|AFP73334.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  296 bits (759), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 150/332 (45%), Positives = 213/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + S   +R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNSQTRARSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +I  + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++ +GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFCAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  AGLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDYGNPAGLCDIAKMSSYP 341


>gi|225446523|ref|XP_002275891.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP2 [Vitis vinifera]
          Length = 358

 Score =  296 bits (759), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 158/337 (46%), Positives = 212/337 (62%), Gaps = 16/337 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSIS---AKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFI 57
           M  + V+W++        E  +S    ++E W+ Q  R YKN+ E    F I++ N RFI
Sbjct: 17  MWTVGVSWSAFSEEHEPMESEMSDMEKRYERWLVQHGRRYKNRDEWQRHFGIYQSNVRFI 76

Query: 58  EKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
              N + N ++ L+ N+FAD+T+EE+ A + G  + T   S ++QS         +  + 
Sbjct: 77  NYINAQ-NFSFTLTDNQFADMTNEEYKALYMG--LGTSETSRKNQSSFKR-----ERSKV 128

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---S 174
           LP S+DWR  GAVTPV+NQG CG CW FS VAAVEGI KIRTG+L+SLSEQ++LDC   S
Sbjct: 129 LPISVDWRKMGAVTPVRNQGECGSCWAFSTVAAVEGINKIRTGKLVSLSEQELLDCDIDS 188

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TS 233
           G+ GC GG+M +AF +I ++ G+T  R YPY   +G CN  + A    +I  Y+ VP  +
Sbjct: 189 GNEGCNGGYMVNAFKFIKQNGGITTARNYPYIGEQGICNKDKAANHVVKISGYETVPPNN 248

Query: 234 ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLI 293
           E  L+ AV++QPVSVAIDA    F+ YS G+F G CG  LNHAVT++GYG  N   YWL+
Sbjct: 249 EKILQAAVAKQPVSVAIDAGGYEFQLYSKGIFNGFCGKQLNHAVTVIGYGEDNGKKYWLV 308

Query: 294 KNSWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPI 329
           KNSWG  WGE G+ RM RD     G+CGIA +ASYPI
Sbjct: 309 KNSWGTGWGEAGYARMIRDSRDDEGICGIAMEASYPI 345


>gi|400180349|gb|AFP73313.1| cysteine protease [Solanum peruvianum]
 gi|400180469|gb|AFP73371.1| cysteine protease [Solanum peruvianum]
 gi|400180471|gb|AFP73372.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  296 bits (759), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 149/332 (44%), Positives = 212/332 (63%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKVERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S         D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--LKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +I  + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  AGLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDYGNPAGLCDIAKMSSYP 341


>gi|400180363|gb|AFP73320.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  296 bits (758), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 149/332 (44%), Positives = 212/332 (63%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S         D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--LKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +I  + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  AGLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDYGNPAGLCDIAKMSSYP 341


>gi|30141019|dbj|BAC75923.1| cysteine protease-1 [Helianthus annuus]
          Length = 461

 Score =  296 bits (758), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 147/315 (46%), Positives = 208/315 (66%), Gaps = 8/315 (2%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           +D ++A +E W+ +  +TY    EK  RF+IFK N RFI++ N  G+ TYKL LN+FADL
Sbjct: 45  DDEVNALYESWLVKHGKTYNALGEKDRRFQIFKDNLRFIDEHNS-GDHTYKLGLNKFADL 103

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
           T+EE+  ++TG K  T +   +     ++ + Y  S   LP  +DWR +GAVT VK+QGS
Sbjct: 104 TNEEYRMTYTGIK--TIDDKKKLSKMKSDRYAYR-SGDSLPEYVDWREQGAVTDVKDQGS 160

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQG 196
           CG CW FS   +VEG+ KI TG LIS+SEQ++++C  S  +GC GG MD AF +II++ G
Sbjct: 161 CGSCWAFSTTGSVEGVNKIVTGDLISVSEQELVNCDTSYNQGCNGGLMDYAFEFIIKNGG 220

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSP 255
           +  E  YPY  ++G C+  +   K   I SY+DVP + E +L+ AVS QPV+VAI+A   
Sbjct: 221 IDTEEDYPYTGKDGKCDKNKKNAKVVTIDSYEDVPVNDESSLKKAVSNQPVAVAIEAGGR 280

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG 315
            F++Y+ G+F G CG  L+H V   GYG+ +   YWL+KNSWG  WGEGG+++M R++  
Sbjct: 281 DFQFYTSGIFTGSCGTALDHGVLAAGYGTEDGKDYWLVKNSWGAEWGEGGYLKMERNIAD 340

Query: 316 -AGLCGIARKASYPI 329
            +G CGIA +ASYPI
Sbjct: 341 KSGKCGIAMEASYPI 355


>gi|297602242|ref|NP_001052232.2| Os04g0203500 [Oryza sativa Japonica Group]
 gi|255675217|dbj|BAF14146.2| Os04g0203500 [Oryza sativa Japonica Group]
          Length = 336

 Score =  296 bits (757), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 152/336 (45%), Positives = 215/336 (63%), Gaps = 16/336 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDS-ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           +L  +   ++++ +R L +D+ ++A+HE WMAQ  R YK+ AEKA RF++FK N  FIE 
Sbjct: 11  ILGCLCLCSAVLAARELSDDAAMAARHERWMAQYGRMYKDDAEKARRFEVFKANVAFIES 70

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHT--GYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           FN  GN  + L +N+FADLT++EF ++ T  G+   T  +    ++   N          
Sbjct: 71  FN-AGNHKFWLGVNQFADLTNDEFRSTKTNKGFIPSTTRVPTGFRNENVNI-------DA 122

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR 177
           LP ++DWR +G VTP+K+QG CGCCW FSAVAA+EGI K+ TG+LIS S  + L    S 
Sbjct: 123 LPATMDWRTKGVVTPIKDQGQCGCCWAFSAVAAMEGIVKLSTGKLISHSLNKSLLTVMSM 182

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GG MDDAF +II++ GLT E  YPY   +    ++  +   A I+ Y+DVP  +E A
Sbjct: 183 GCEGGLMDDAFKFIIKNGGLTTESNYPYAAVDD--KFKSVSNSVASIKGYEDVPANNEAA 240

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKN 295
           L  AV+ QPVSVA+D     F++Y GGV  G CG +L+H +  +GYG +++G  YWL+KN
Sbjct: 241 LMKAVANQPVSVAVDGGDMTFQFYKGGVMTGSCGTDLDHGIVAIGYGKASDGTKYWLLKN 300

Query: 296 SWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
           SWG  WGE GF+RM +D+    G+CG+A + SYP A
Sbjct: 301 SWGMTWGENGFLRMEKDISDKRGMCGLAMEPSYPTA 336


>gi|400180369|gb|AFP73323.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  296 bits (757), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 148/332 (44%), Positives = 214/332 (64%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +I  + G++ E  Y Y  ++  C  Q     A +I SY+ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIKENGGISRESDYEYLGQQYTCRSQE-KTAAVQISSYKVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  +GLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGNPSGLCDIAKMSSYP 341


>gi|302143380|emb|CBI21941.3| unnamed protein product [Vitis vinifera]
          Length = 354

 Score =  296 bits (757), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 158/337 (46%), Positives = 212/337 (62%), Gaps = 16/337 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSIS---AKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFI 57
           M  + V+W++        E  +S    ++E W+ Q  R YKN+ E    F I++ N RFI
Sbjct: 13  MWTVGVSWSAFSEEHEPMESEMSDMEKRYERWLVQHGRRYKNRDEWQRHFGIYQSNVRFI 72

Query: 58  EKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
              N + N ++ L+ N+FAD+T+EE+ A + G  + T   S ++QS         +  + 
Sbjct: 73  NYINAQ-NFSFTLTDNQFADMTNEEYKALYMG--LGTSETSRKNQSSFKR-----ERSKV 124

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---S 174
           LP S+DWR  GAVTPV+NQG CG CW FS VAAVEGI KIRTG+L+SLSEQ++LDC   S
Sbjct: 125 LPISVDWRKMGAVTPVRNQGECGSCWAFSTVAAVEGINKIRTGKLVSLSEQELLDCDIDS 184

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TS 233
           G+ GC GG+M +AF +I ++ G+T  R YPY   +G CN  + A    +I  Y+ VP  +
Sbjct: 185 GNEGCNGGYMVNAFKFIKQNGGITTARNYPYIGEQGICNKDKAANHVVKISGYETVPPNN 244

Query: 234 ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLI 293
           E  L+ AV++QPVSVAIDA    F+ YS G+F G CG  LNHAVT++GYG  N   YWL+
Sbjct: 245 EKILQAAVAKQPVSVAIDAGGYEFQLYSKGIFNGFCGKQLNHAVTVIGYGEDNGKKYWLV 304

Query: 294 KNSWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPI 329
           KNSWG  WGE G+ RM RD     G+CGIA +ASYPI
Sbjct: 305 KNSWGTGWGEAGYARMIRDSRDDEGICGIAMEASYPI 341


>gi|449500145|ref|XP_004161017.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
          Length = 349

 Score =  296 bits (757), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 164/354 (46%), Positives = 221/354 (62%), Gaps = 35/354 (9%)

Query: 1   MLIIMVTWASLVMSRTL-------HEDSI---SAKH-----------ELWMAQSARTYKN 39
           M +   + A+L++S TL       H+ SI   S +H           E WM++ ++TY++
Sbjct: 1   MALSTFSKATLILSATLFITYAIAHDFSIVGYSPEHLASMDKTIELFESWMSKHSKTYRS 60

Query: 40  QAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMP-TRNIS 98
             EK  RF+IF  N + I++ N++ + +Y L LNEFADL+ EEF + + G ++   R  S
Sbjct: 61  IEEKLHRFEIFLDNLKHIDETNKKVS-SYWLGLNEFADLSHEEFKSKYLGLRVEFPRKRS 119

Query: 99  NQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIR 158
           ++  SY +           LP S+DWR +GAVTPVKNQGSCG CW FS VAAVEGI +I 
Sbjct: 120 SRGFSYGD--------VEDLPESVDWRTKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIV 171

Query: 159 TGRLISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQR 216
           TG L SLSEQ+++DC  S + GCYGG MD AF YI+ + GL  E  YPY   EG C  ++
Sbjct: 172 TGNLTSLSEQELIDCDRSFNNGCYGGLMDYAFQYIMSNSGLRKEEDYPYLMEEGRCIREK 231

Query: 217 GAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNH 275
              +   I  Y+DVP + E +L  A+S QPVSVAI+ASS  F++Y GG+F G CG  ++H
Sbjct: 232 EQFEVVTISGYEDVPANDEQSLLKALSHQPVSVAIEASSRNFQFYKGGIFTGRCGTQMDH 291

Query: 276 AVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
            VT VGYGSS    Y ++KNSWG  WGE G+IRM+R+ G   GLCGI + ASYP
Sbjct: 292 GVTAVGYGSSEGTDYIIVKNSWGPKWGENGYIRMKRNTGKPEGLCGINQMASYP 345


>gi|50355611|dbj|BAD29954.1| cysteine protease [Daucus carota]
          Length = 474

 Score =  296 bits (757), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 148/315 (46%), Positives = 199/315 (63%), Gaps = 7/315 (2%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
            D + + +E W+ +  + Y    EK  RF IFK N  F+++ N   NQ+YKL LN+FADL
Sbjct: 53  HDQLLSLYESWLVKHHKNYNALGEKETRFGIFKDNVGFVDRHNSMRNQSYKLGLNKFADL 112

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
           T++E+ + +   KM  R   N+   + ++ F + D    LP S+DWR RGAV PVK+QG 
Sbjct: 113 TNDEYRSLYLSGKMMKRERKNE-DGFRSDRFVFEDGDH-LPESVDWRDRGAVAPVKDQGQ 170

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSYIIRSQG 196
           CG CW FS V AVEGI KI TG LISLSEQ+++DC    ++GC GG MD AF +I+++ G
Sbjct: 171 CGSCWAFSTVGAVEGINKIVTGELISLSEQELVDCDNGYNQGCNGGLMDYAFEFIVKNGG 230

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSP 255
           +  E  YPY+  +G C+  R   K   I  Y+DVP   E +L+ AV+ QPVSVAI+A   
Sbjct: 231 IDTEDDYPYKGVDGLCDQNRKNAKVVTINGYEDVPHNDEKSLKKAVAHQPVSVAIEAGGR 290

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG- 314
            F+ Y  GVF G CG  L+H V  VGYGS N   YW+++NSWG +WGE G+IR+ R+V  
Sbjct: 291 AFQLYESGVFTGQCGTELDHGVVAVGYGSENGKDYWIVRNSWGPDWGESGYIRLERNVAS 350

Query: 315 -GAGLCGIARKASYP 328
              G CGIA +ASYP
Sbjct: 351 TSTGKCGIAMQASYP 365


>gi|75277440|sp|O23791.1|BROM1_ANACO RecName: Full=Fruit bromelain; AltName: Allergen=Ana c 2; Flags:
           Precursor
 gi|2342496|dbj|BAA21849.1| bromelain [Ananas comosus]
          Length = 351

 Score =  296 bits (757), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 154/333 (46%), Positives = 206/333 (61%), Gaps = 14/333 (4%)

Query: 1   MLIIMVTWASL-VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
            L +   WAS    SR    D +  + E WMA+  R YK+  EK  RF+IFK N + IE 
Sbjct: 11  FLFLCAMWASPSAASRDEPNDPMMKRFEEWMAEYGRVYKDDDEKMRRFQIFKNNVKHIET 70

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSR-RGL 118
           FN     +Y L +N+F D+T  EF+A +TG  +P  NI  +          + D     +
Sbjct: 71  FNSRNENSYTLGINQFTDMTKSEFVAQYTGVSLPL-NIEREPV------VSFDDVNISAV 123

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRG 178
           P+SIDWR  GAV  VKNQ  CG CW F+A+A VEGI KI+TG L+SLSEQ+VLDC+ S G
Sbjct: 124 PQSIDWRDYGAVNEVKNQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEVLDCAVSYG 183

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELAL 237
           C GGW++ A+ +II + G+T E  YPY   +G CN       +A I  Y  V    E ++
Sbjct: 184 CKGGWVNKAYDFIISNNGVTTEENYPYLAYQGTCN-ANSFPNSAYITGYSYVRRNDERSM 242

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNS 296
            YAVS QP++  IDAS   F+YY+GGVF+GPCG +LNHA+TI+GYG  + G  YW+++NS
Sbjct: 243 MYAVSNQPIAALIDASE-NFQYYNGGVFSGPCGTSLNHAITIIGYGQDSSGTKYWIVRNS 301

Query: 297 WGQNWGEGGFIRMRRDV-GGAGLCGIARKASYP 328
           WG +WGEGG++RM R V   +G+CGIA    +P
Sbjct: 302 WGSSWGEGGYVRMARGVSSSSGVCGIAMAPLFP 334


>gi|357130141|ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like [Brachypodium
           distachyon]
          Length = 457

 Score =  296 bits (757), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 161/317 (50%), Positives = 200/317 (63%), Gaps = 15/317 (4%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D I    E W+A+  + Y +  EK  RF++FK N + I+K NRE   +Y L LNEFADLT
Sbjct: 144 DRIIELFEKWLAKHQKAYASFEEKLHRFEVFKDNLKHIDKVNREVT-SYWLGLNEFADLT 202

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRARGAVTPVKNQGS 138
            EEF A++ G   P     ++        F Y D S   LP+S+DWR +GAVT VKNQG 
Sbjct: 203 HEEFKATYLGLAPPAPARESRGS------FKYEDVSADDLPKSVDWRTKGAVTEVKNQGQ 256

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYIIRSQG 196
           CG CW FS VAAVEGI  I TG L +LSEQ+++DCS  G+ GC GG MD AFSYI  S G
Sbjct: 257 CGSCWAFSTVAAVEGINAIVTGNLTALSEQELIDCSVDGNNGCNGGLMDYAFSYIASSGG 316

Query: 197 LTDERVYPYQRREGYC-NWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASS 254
           L  E  YPY   EG C + ++   +A  I  Y+DVP  +E AL  A++ QPVSVAI+AS 
Sbjct: 317 LHTEEAYPYLMEEGSCGDGKKSESEAVTISGYEDVPAHNEQALIKALAHQPVSVAIEASG 376

Query: 255 PGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG--PYWLIKNSWGQNWGEGGFIRMRRD 312
             F++YSGGVF GPCG  L+H V  VGYGS       Y +++NSWG  WGE G+IRM+R 
Sbjct: 377 RHFQFYSGGVFDGPCGTQLDHGVAAVGYGSDKGKGHDYIIVRNSWGAKWGEKGYIRMKRG 436

Query: 313 VG-GAGLCGIARKASYP 328
            G G GLCGI + ASYP
Sbjct: 437 TGKGEGLCGINKMASYP 453


>gi|357474523|ref|XP_003607546.1| Cysteine proteinase [Medicago truncatula]
 gi|358347207|ref|XP_003637651.1| Cysteine proteinase [Medicago truncatula]
 gi|355503586|gb|AES84789.1| Cysteine proteinase [Medicago truncatula]
 gi|355508601|gb|AES89743.1| Cysteine proteinase [Medicago truncatula]
          Length = 345

 Score =  295 bits (756), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 149/315 (47%), Positives = 213/315 (67%), Gaps = 15/315 (4%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           +++  + + W+ +  R YK+  E+ +RF I++ N ++I+  N + N +Y L+ N+FADLT
Sbjct: 40  EAMKKRFDGWVKRHGRKYKHNDEREVRFGIYQANVQYIQCKNAQKN-SYNLTDNKFADLT 98

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
           +EEF +++ G  + TR  S+      N  F Y D    LP S DWR  GAVT + +QG C
Sbjct: 99  NEEFQSTYMG--LSTRLRSH------NTGFRY-DEHGDLPESKDWRKEGAVTEIMDQGQC 149

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSRGCYGGWMDDAFSYIIRSQG 196
           G CW F+AVAAVEGI KI++G+LISLSEQ+++DC   SG++GC GG M+ A+++II + G
Sbjct: 150 GGCWAFAAVAAVEGINKIKSGKLISLSEQELIDCDVKSGNQGCQGGLMETAYTFIIENGG 209

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSP 255
           LT E+ YPY+  +G C  ++ A  AA I  Y++VP  +E  L+ A + QPVSVAIDA   
Sbjct: 210 LTTEQDYPYEGVDGTCKMEKAAHYAASISGYEEVPADNEAKLKAAAAHQPVSVAIDAGGY 269

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRD-VG 314
            F++YS GVF+G CG  LNH VT+VGYG      YW++KNSWG +WGE G+IRM+RD + 
Sbjct: 270 SFQFYSEGVFSGICGKQLNHGVTVVGYGKETINKYWIVKNSWGADWGESGYIRMKRDTLS 329

Query: 315 GAGLCGIARKASYPI 329
             G+CGIA +ASYP+
Sbjct: 330 KEGMCGIAMQASYPL 344


>gi|400180385|gb|AFP73331.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  295 bits (756), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 148/332 (44%), Positives = 212/332 (63%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +I  + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  +GLC I + +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGDPSGLCDITKMSSYP 341


>gi|224131910|ref|XP_002328138.1| predicted protein [Populus trichocarpa]
 gi|222837653|gb|EEE76018.1| predicted protein [Populus trichocarpa]
          Length = 349

 Score =  295 bits (755), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 155/314 (49%), Positives = 201/314 (64%), Gaps = 14/314 (4%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +    E W++   + Y +  EK  RF++FK+N + I++ N+E   +Y L LNEFADL+
Sbjct: 41  DKLVELFESWISGHGKAYNSLEEKLHRFEVFKENLKHIDQRNKEVT-SYWLGLNEFADLS 99

Query: 80  DEEFIASHTG-YKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
            EEF +   G Y    R  S++  SY +           LP+SIDWR +GAVTPVKNQGS
Sbjct: 100 HEEFKSKFLGLYPEFPRKKSSEDFSYRD--------VVDLPKSIDWRKKGAVTPVKNQGS 151

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQG 196
           CG CW FS VAAVEGI +I  G L SLSEQQ++DC  S   GC GG MD AF +I+ + G
Sbjct: 152 CGSCWAFSTVAAVEGINQIVAGNLTSLSEQQLIDCDTSFNNGCNGGLMDYAFEFIVNNGG 211

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSP 255
           L  E  YPY   EG C+ +R  M+   I  Y DVP   E +L  A++ QP+SVAIDAS  
Sbjct: 212 LHKEEDYPYLMEEGTCDEKREEMEVVTISGYHDVPRNDEQSLLKALAHQPLSVAIDASGR 271

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG 315
            F++YSGGVF+GPCG +L+H V  VGYGSS+   Y ++KNSWG  WGE G++RM+R+ G 
Sbjct: 272 DFQFYSGGVFSGPCGTDLDHGVAAVGYGSSSGIDYIIVKNSWGPKWGERGYLRMKRNTGK 331

Query: 316 A-GLCGIARKASYP 328
             GLCGI + ASYP
Sbjct: 332 PEGLCGINKMASYP 345


>gi|334904467|gb|AEH26024.1| cysteine peptidase [Ananas comosus]
          Length = 352

 Score =  295 bits (755), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 155/333 (46%), Positives = 204/333 (61%), Gaps = 13/333 (3%)

Query: 1   MLIIMVTWASL-VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
            L + V WAS    SR    D +  + E WMA+  R YK+  EK  RF+IFK N   IE 
Sbjct: 11  FLFLCVMWASPSAASRDEPSDPMMKRFEEWMAEYGRVYKDNDEKMRRFQIFKNNVNHIET 70

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSR-RGL 118
           FN     +Y L +N+F D+T  EF+A +TG      NI  +          + D     +
Sbjct: 71  FNSHNGNSYTLGINQFTDMTKSEFVAQYTGGISRPLNIEREPV------VSFDDVNISAV 124

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRG 178
           P+SIDWR  GAV  VKNQ  CG CW F+A+A VEGI KI+TG L+SLSEQ+VLDC+ S G
Sbjct: 125 PQSIDWRDYGAVNEVKNQNPCGSCWAFAAIATVEGIYKIKTGYLVSLSEQEVLDCAVSYG 184

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELAL 237
           C GGW++ A+ +II + G+T E  YPYQ  +G CN       +A I  Y  V    E ++
Sbjct: 185 CKGGWVNKAYDFIISNNGVTTEENYPYQAYQGTCN-ANSFPNSAYITGYSYVRRNDERSM 243

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNS 296
            YAVS QP++  IDAS   F+YY+GGVF+GPCG +LNHA+TI+GYG  + G  YW+++NS
Sbjct: 244 MYAVSNQPIAALIDASE-NFQYYNGGVFSGPCGTSLNHAITIIGYGQDSSGTKYWIVRNS 302

Query: 297 WGQNWGEGGFIRMRRDV-GGAGLCGIARKASYP 328
           WG +WGEGG++RM R V   +G CGIA    +P
Sbjct: 303 WGSSWGEGGYVRMARGVSSSSGACGIAMSPLFP 335


>gi|400180465|gb|AFP73369.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  295 bits (755), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 149/332 (44%), Positives = 212/332 (63%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S     F   D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--FKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DWR  GAVT VK+QG CGCCW FSAV ++E   KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEVAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +I  + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  AGLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDSGNPAGLCDIAKMSSYP 341


>gi|400180361|gb|AFP73319.1| cysteine protease [Solanum peruvianum]
 gi|400180397|gb|AFP73337.1| cysteine protease [Solanum peruvianum]
 gi|400180401|gb|AFP73339.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  295 bits (755), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 146/331 (44%), Positives = 212/331 (64%), Gaps = 6/331 (1%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKGERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S +  +     S   +P 
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMS-STEFIINDLSDDDMPS 132

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-GC 179
           ++DWR  GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  GC
Sbjct: 133 NLDWRESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYGC 192

Query: 180 YGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRY 239
            GG+M +AF +I  + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L  
Sbjct: 193 NGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLLQ 251

Query: 240 AVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWG 298
           AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSWG
Sbjct: 252 AVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSWG 310

Query: 299 QNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
            +WGE GF+++ RD G  +GLC I + +SYP
Sbjct: 311 TSWGENGFMKIIRDSGDPSGLCDITKMSSYP 341


>gi|356543114|ref|XP_003540008.1| PREDICTED: LOW QUALITY PROTEIN: KDEL-tailed cysteine endopeptidase
           CEP1-like [Glycine max]
          Length = 343

 Score =  295 bits (755), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 156/330 (47%), Positives = 207/330 (62%), Gaps = 15/330 (4%)

Query: 9   ASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTY 68
            S V SR LH+ S+  +HE WM +  + YK+ AE   RF IF+ N  FIE FN  GN+ Y
Sbjct: 21  TSQVKSRKLHDASMYERHEQWMEKYGKVYKDSAEMQKRFLIFENNVEFIESFNAAGNKPY 80

Query: 69  KLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPDSRRGLPRSIDWR 125
           KLS+N  AD T+EEF+ASH GYK        I+ Q+       F Y ++   +P ++DWR
Sbjct: 81  KLSINHLADQTNEEFMASHKGYKGSHWQGLRITTQTP------FKY-ENVTDIPWAVDWR 133

Query: 126 ARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWM 184
            +G VT +K+Q  CG CW FSAVAA EGI +I TG L+SLSE++++DC S   GC GG M
Sbjct: 134 QKGDVTSIKDQAQCGNCWAFSAVAATEGIYQITTGNLVSLSEKELVDCDSVDHGCDGGLM 193

Query: 185 DDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSR 243
           +  F +II++ G++ E  YPY    G C+  + A   A+I  Y+ VP + E  L+ AV+ 
Sbjct: 194 EHGFEFIIKNGGISSEANYPYTAVNGTCDTNKEASPVAQITGYETVPVNCEEELQKAVAN 253

Query: 244 Q-PVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNW 301
           Q  +SV+IDA    F++Y  GVF G CG  L+H VT VGYGS++ G  YW++KNSWG  W
Sbjct: 254 QLTMSVSIDAGGSAFQFYPSGVFTGQCGTQLDHGVTAVGYGSTDYGTQYWIVKNSWGTQW 313

Query: 302 GEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           GE G+IRM R +    GLCGIA  ASYP A
Sbjct: 314 GEEGYIRMLRGIDAQEGLCGIAMDASYPTA 343


>gi|242072390|ref|XP_002446131.1| hypothetical protein SORBIDRAFT_06g002140 [Sorghum bicolor]
 gi|241937314|gb|EES10459.1| hypothetical protein SORBIDRAFT_06g002140 [Sorghum bicolor]
          Length = 328

 Score =  295 bits (755), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 150/326 (46%), Positives = 204/326 (62%), Gaps = 24/326 (7%)

Query: 9   ASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTY 68
           +S++ +R L + ++  +HE WM +  R YK+ AEKA RF++FK N  F+E FN   N  +
Sbjct: 19  SSVLAARELSDAAMVERHENWMVEYGRVYKDAAEKARRFQVFKDNVAFVESFNTNKNNKF 78

Query: 69  KLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARG 128
            L +N+FADLT EEF A + G+K     +      Y N       S   LP ++DWR +G
Sbjct: 79  WLGVNQFADLTTEEFKA-NKGFKPTAEKVPTTGFKYENL------SVSALPTAVDWRTKG 131

Query: 129 AVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSRGCYGGWMD 185
           AVTP+KNQG C         AA+EGI K+ TG LISLSEQ+++DC   S   GC GGWMD
Sbjct: 132 AVTPIKNQGQC---------AAMEGIVKLSTGNLISLSEQELVDCDTHSMDEGCEGGWMD 182

Query: 186 DAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ 244
            AF ++I++ GL  E  YPY+  +G C  + G+  AA I+ ++DVP  +E AL  AV+ Q
Sbjct: 183 SAFEFVIKNGGLATESNYPYKAVDGKC--KGGSKSAATIKGHEDVPVNNEAALMKAVANQ 240

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGE 303
           PVSVA+DAS   F  YSGGV  G CG  L+H +  +GYG  ++G  YW++KNSWG  WGE
Sbjct: 241 PVSVAVDASDRTFMLYSGGVMTGSCGTELDHGIAAIGYGMESDGTKYWILKNSWGTTWGE 300

Query: 304 GGFIRMRRDVGGA-GLCGIARKASYP 328
            GF+RM +D+    G+CG+A K SYP
Sbjct: 301 KGFLRMEKDITDKRGMCGLAMKPSYP 326


>gi|310656790|gb|ADP02219.1| Peptidase_C1 domain-containing protein [Triticum aestivum]
          Length = 419

 Score =  295 bits (755), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 147/323 (45%), Positives = 206/323 (63%), Gaps = 27/323 (8%)

Query: 4   IMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE 63
           I +  ++++ +R L + ++  KHE WMA+  R YK+  EKA RFK FK N  FIE FN  
Sbjct: 15  ICLCSSTVLSARELGDAAMVEKHEQWMAKFNRVYKDSTEKAQRFKAFKANVAFIESFN-T 73

Query: 64  GNQTYKLSLNEFADLTDEEFIASHT-------GYKMPTRNISNQSQSYANNWFGYPD-SR 115
           GN  + L +N+F DLT++EF A+ T       G + PTR             F Y + S 
Sbjct: 74  GNHKFWLGVNQFTDLTNDEFRATKTNKGLKRNGARAPTR-------------FKYNNVST 120

Query: 116 RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS- 174
             LP ++DWR +G VTP+K+QG CGCCW FSAVAA EGI K+ TG+L+SLSEQ+++DC  
Sbjct: 121 DALPAAVDWRTKGVVTPIKDQGQCGCCWAFSAVAATEGIVKLSTGKLVSLSEQELVDCDV 180

Query: 175 --GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT 232
               +GC GG MD+AF +II++ GLT E  YPY  ++G C     +   A I+ Y+DVP 
Sbjct: 181 HGVDQGCEGGEMDNAFKFIIKNGGLTTEANYPYTAQDGQCKTSTTSNSVATIKGYEDVPA 240

Query: 233 S-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-Y 290
           + E +L  AV+ QPVSVA+D     F++YSGGV  G CG +L+H +  +GYG +++G  +
Sbjct: 241 NDESSLMKAVANQPVSVAVDGGDVIFQHYSGGVMTGSCGTDLDHGIVAIGYGMTSDGTKF 300

Query: 291 WLIKNSWGQNWGEGGFIRMRRDV 313
           WL+KNSWG  WGE G++RM +D+
Sbjct: 301 WLLKNSWGTTWGESGYLRMEKDI 323


>gi|21666724|gb|AAM73806.1|AF448505_1 cysteine proteinase [Brassica napus]
 gi|21666726|gb|AAM73807.1|AF448506_1 cysteine proteinase [Brassica napus]
          Length = 343

 Score =  295 bits (755), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 146/319 (45%), Positives = 208/319 (65%), Gaps = 8/319 (2%)

Query: 15  RTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNR-EGNQTYKLSLN 73
           R L E ++  +H  WM +  R Y +  EK  R+ +FK+N   IE+ N  +   T+KL++N
Sbjct: 26  RPLDEVTMQKRHAAWMTEHGRVYADANEKNNRYVVFKRNVESIERLNEVQYGLTFKLAVN 85

Query: 74  EFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPV 133
           +FADLT+EEF + +TGYK    N    S++   ++     S   LP S+DWR +GAVTP+
Sbjct: 86  QFADLTNEEFRSMYTGYK---GNSVLSSRTKPTSFRYQHVSSDALPISVDWRKKGAVTPI 142

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYII 192
           K+QGSCG CW FSAVAA+EG+ +I+ G+LISLSEQ+++DC +   GC GG+M+ AF+Y +
Sbjct: 143 KDQGSCGSCWAFSAVAAIEGVAQIKKGKLISLSEQELVDCDTNDDGCMGGYMNSAFNYTM 202

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAID 251
            + GLT E  YPY+  +G CN  +    A  I+ ++DVP + E AL  AV+  PVS+ I 
Sbjct: 203 TTGGLTSESNYPYKSTDGTCNINKTKQIATSIKGFEDVPANDEKALMKAVAHHPVSIGIA 262

Query: 252 ASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYG-SSNEGPYWLIKNSWGQNWGEGGFIRMR 310
               GF++YS GVF+G C  +L+H V +VGYG SSN   YW++KNSWG  WGE G++R++
Sbjct: 263 GGGTGFQFYSSGVFSGECSTHLDHGVAVVGYGKSSNGSKYWILKNSWGPKWGERGYMRIK 322

Query: 311 RDVGGA-GLCGIARKASYP 328
           +D     G CG+A  ASYP
Sbjct: 323 KDTKAKHGQCGLAMNASYP 341


>gi|147790682|emb|CAN61026.1| hypothetical protein VITISV_001146 [Vitis vinifera]
          Length = 469

 Score =  295 bits (754), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 156/318 (49%), Positives = 203/318 (63%), Gaps = 14/318 (4%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           ++ + A +E W+A+  ++Y    EK  RF+IFK N RFI++ N E N+TYK+ LN FADL
Sbjct: 46  DEDVMAVYEAWLAKHGKSYNALGEKERRFQIFKDNLRFIDEHNAE-NRTYKVGLNRFADL 104

Query: 79  TDEEFIASHTGYKMPTRNISNQ--SQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQ 136
           T+EE+ + + G +   +  S+   S  YA   F   DS   LP S+DWR +GAV  VK+Q
Sbjct: 105 TNEEYRSMYLGTRTAAKRRSSNKISDRYA---FRVGDS---LPESVDWRKKGAVVEVKDQ 158

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRS 194
           GSCG CW FS +AAVEGI KI TG LISLSEQ+++DC  S   GC GG MD AF +II +
Sbjct: 159 GSCGSCWAFSTIAAVEGINKIVTGGLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIINN 218

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDAS 253
            G+  E  YPY+  +G C+  R       I  Y+DVP   E +L  AV+ QPVSVAI+A 
Sbjct: 219 GGIDSEEDYPYKASDGRCDQYRKNAXVVTIDGYEDVPENDEKSLEKAVANQPVSVAIEAG 278

Query: 254 SPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV 313
              F+ Y  G+F G CG  L+H VT VGYG+ N   YW++KNSWG +WGE G+IRM RD+
Sbjct: 279 GREFQLYQSGIFTGRCGTALDHGVTAVGYGTENGVDYWIVKNSWGASWGEEGYIRMERDL 338

Query: 314 G--GAGLCGIARKASYPI 329
                G CGIA +ASYPI
Sbjct: 339 ATSATGKCGIAMEASYPI 356


>gi|356515080|ref|XP_003526229.1| PREDICTED: vignain-like [Glycine max]
          Length = 284

 Score =  294 bits (753), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 151/289 (52%), Positives = 188/289 (65%), Gaps = 18/289 (6%)

Query: 51  KKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANN--- 107
           K+N  +IE FN   N+ YKL +N+FADLT EEFI          RN  N    ++N    
Sbjct: 5   KENVNYIEAFNNAANKPYKLGINQFADLTSEEFIVP--------RNRFNGHMRFSNTRTT 56

Query: 108 WFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSE 167
            F Y +    LP SIDWR +GAVTP+KNQGSCGCCW FSA+AA EGI KI TG+L+SLSE
Sbjct: 57  TFKYENVTV-LPDSIDWRQKGAVTPIKNQGSCGCCWAFSAIAATEGIHKISTGKLVSLSE 115

Query: 168 QQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARI 224
           Q+V+DC       GC GG+MD AF +II++ G+  E  YPY+  +G CN +  A+ A  I
Sbjct: 116 QEVVDCDTKGTDHGCEGGYMDGAFKFIIQNHGINTEASYPYKGVDGKCNIKEEAVHATTI 175

Query: 225 RSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYG 283
             Y+DVP  +E AL+ AV+ QPVSVAIDA    F++Y  G+F G CG  L+H VT VGYG
Sbjct: 176 TGYEDVPINNEKALQKAVANQPVSVAIDARGADFQFYKSGIFTGSCGTELDHGVTAVGYG 235

Query: 284 SSNEGP-YWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
            +NEG  YWL+KNSWG  WGE G+  M+R V    G+CGIA  ASYP A
Sbjct: 236 ENNEGTKYWLVKNSWGTEWGEEGYTMMQRGVKAVEGICGIAMLASYPTA 284


>gi|350538043|ref|NP_001234324.1| cysteine protease TDI-65 precursor [Solanum lycopersicum]
 gi|5726641|gb|AAD48496.1|AF172856_1 cysteine protease TDI-65 [Solanum lycopersicum]
 gi|2828252|emb|CAA05894.1| CYP1 [Solanum lycopersicum]
          Length = 466

 Score =  294 bits (753), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 144/315 (45%), Positives = 208/315 (66%), Gaps = 7/315 (2%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           +D +SA +E W+ +  ++Y    EK  RF+IFK N R+I++ N   NQ+YKL L +FADL
Sbjct: 42  DDEVSALYESWLIEHGKSYNALGEKDKRFQIFKDNLRYIDEQNSVPNQSYKLGLTKFADL 101

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
           T+EE+ + + G K  + +    S++ ++ +   P     LP SIDWR +G +  VK+QGS
Sbjct: 102 TNEEYRSIYLGTK-SSGDRKKLSKNKSDRYL--PKVGDSLPESIDWREKGVLVGVKDQGS 158

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQG 196
           CG CW FSAVAA+E I  I TG LISLSEQ+++DC  S   GC GG MD AF ++I++ G
Sbjct: 159 CGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDRSYNEGCDGGLMDYAFEFVIKNGG 218

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSP 255
           +  E  YPY+ R G C+  R   K  +I SY+DVP + E AL+ AV+ QPVS+A++A   
Sbjct: 219 IDTEEDYPYKERNGVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAHQPVSIALEAGGR 278

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG- 314
            F++Y  G+F G CG  ++H V I GYG+ N   YW+++NSWG NWGE G++R++R+V  
Sbjct: 279 DFQHYKSGIFTGKCGTAVDHGVVIAGYGTENGMDYWIVRNSWGANWGENGYLRVQRNVAS 338

Query: 315 GAGLCGIARKASYPI 329
            +GLCG+A + SYP+
Sbjct: 339 SSGLCGLAIEPSYPV 353


>gi|356553978|ref|XP_003545327.1| PREDICTED: cysteine proteinase RD21a-like [Glycine max]
          Length = 496

 Score =  294 bits (752), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 156/336 (46%), Positives = 207/336 (61%), Gaps = 15/336 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           M II    A    SR+  ++ + + +E W+ +  + Y    EK  RF+IFK N RFI+  
Sbjct: 56  MSIISYDNAHAATSRS--DEELMSMYEQWLVKHGKVYNALGEKEKRFQIFKDNLRFIDDH 113

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKM-PTRNI-SNQSQSYANNWFGYPDSRRGL 118
           N + ++TYKL LN FADLT+EE+ A + G K+ P R +    S  YA      P     L
Sbjct: 114 NSQEDRTYKLGLNRFADLTNEEYRAKYLGTKIDPNRRLGKTPSNRYA------PRVGDKL 167

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--S 176
           P S+DWR  GAV PVK+QG CG CW FSA+ AVEGI KI TG LISLSEQ+++DC    +
Sbjct: 168 PESVDWRKEGAVPPVKDQGGCGSCWAFSAIGAVEGINKIVTGELISLSEQELVDCDTGYN 227

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SEL 235
            GC GG MD AF +II + G+  E  YPY+  +G C+  R   K   I  Y+DVP   EL
Sbjct: 228 EGCNGGLMDYAFEFIINNGGIDSEEDYPYRGVDGRCDTYRKNAKVVSIDDYEDVPAYDEL 287

Query: 236 ALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKN 295
           AL+ AV+ QPVSVAI+     F+ Y  GVF G CG  L+H V  VGYG++N   YW+++N
Sbjct: 288 ALKKAVANQPVSVAIEGGGREFQLYVSGVFTGRCGTALDHGVVAVGYGTANGHDYWIVRN 347

Query: 296 SWGQNWGEGGFIRMRRDVGG--AGLCGIARKASYPI 329
           SWG +WGE G+IR+ R++    +G CGIA + SYP+
Sbjct: 348 SWGPSWGEDGYIRLERNLANSRSGKCGIAIEPSYPL 383


>gi|357446975|ref|XP_003593763.1| Cysteine proteinase [Medicago truncatula]
 gi|355482811|gb|AES64014.1| Cysteine proteinase [Medicago truncatula]
          Length = 350

 Score =  294 bits (752), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 166/332 (50%), Positives = 212/332 (63%), Gaps = 13/332 (3%)

Query: 4   IMVTWASL--VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           I++ WA     MSRTL E S+   H+ WM +  RTY N +E   R KIFK+N  +IE FN
Sbjct: 9   IILLWACAYPTMSRTLTESSVVEAHQQWMMKYERTYTNSSEMEKRKKIFKENLEYIENFN 68

Query: 62  REGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRS 121
             GN++YKL LN ++DLT EEFIASHTG+K+  +   ++ +S A   F   D    +P +
Sbjct: 69  NVGNKSYKLGLNRYSDLTSEEFIASHTGFKVSDQLSDSKMRSVAIP-FNLNDD---VPTN 124

Query: 122 IDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-GSRGCY 180
            DWR +G VT VKNQ  CGCCW F+AVAAVEGI KI+ G LISLSEQQ++DC   S GC 
Sbjct: 125 FDWREKGVVTDVKNQRQCGCCWAFTAVAAVEGIVKIKNGNLISLSEQQLVDCDRQSSGCG 184

Query: 181 GGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMK-AARIRSYQDVPTS-ELALR 238
           GG    AF  II+S+G+  E  YPY+  +     Q G +  AA+I  Y  VP + E  L 
Sbjct: 185 GGDFVLAFDSIIKSRGIVKEDDYPYKANDVQ-TCQLGQIPGAAQINGYFKVPANDEQQLL 243

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV +QPVSVAI ++S  F +Y GGV+ G CG  LNHAVTI+GYG S  G  YWLIKNSW
Sbjct: 244 RAVLQQPVSVAI-STSYDFHHYMGGVYEGSCGPKLNHAVTIIGYGVSEAGKKYWLIKNSW 302

Query: 298 GQNWGEGGFIRMRRDVGGA-GLCGIARKASYP 328
           G+ WGE G++++ R+     G C IA  A+YP
Sbjct: 303 GETWGEKGYMKVLRESSATGGQCSIAVHAAYP 334


>gi|449454309|ref|XP_004144898.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
 gi|449471311|ref|XP_004153272.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
          Length = 349

 Score =  294 bits (752), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 163/354 (46%), Positives = 220/354 (62%), Gaps = 35/354 (9%)

Query: 1   MLIIMVTWASLVMSRTL-------HEDSI---SAKH-----------ELWMAQSARTYKN 39
           M +   + A+L++S TL       H+ SI   S +H           E WM++ ++ Y++
Sbjct: 1   MALSTFSKATLILSATLFITYATAHDFSIVGYSPEHLASMDKTIELFESWMSKHSKAYRS 60

Query: 40  QAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMP-TRNIS 98
             EK  RF+IF  N + I++ N++ + +Y L LNEFADL+ EEF + + G ++   R  S
Sbjct: 61  IEEKLHRFEIFLDNLKHIDETNKKVS-SYWLGLNEFADLSHEEFKSKYLGLRVEFPRKRS 119

Query: 99  NQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIR 158
           ++  SY +           LP S+DWR +GAVTPVKNQGSCG CW FS VAAVEGI +I 
Sbjct: 120 SRGFSYGD--------VEDLPESVDWRTKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIV 171

Query: 159 TGRLISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQR 216
           TG L SLSEQ+++DC  S + GCYGG MD AF YI+ + GL  E  YPY   EG C  ++
Sbjct: 172 TGNLTSLSEQELIDCDRSFNNGCYGGLMDYAFQYIMSNSGLRKEEDYPYLMEEGRCIREK 231

Query: 217 GAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNH 275
              +   I  Y+DVP + E +L  A+S QPVSVAI+ASS  F++Y GG+F G CG  ++H
Sbjct: 232 EQFEVVTISGYEDVPANDEQSLLKALSHQPVSVAIEASSRNFQFYKGGIFTGRCGTQMDH 291

Query: 276 AVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
            VT VGYGSS    Y ++KNSWG  WGE G+IRM+R+ G   GLCGI + ASYP
Sbjct: 292 GVTAVGYGSSEGTDYIIVKNSWGPKWGENGYIRMKRNTGKPEGLCGINQMASYP 345


>gi|37780041|gb|AAP32193.1| cysteine protease 14 [Trifolium repens]
          Length = 351

 Score =  294 bits (752), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 149/313 (47%), Positives = 205/313 (65%), Gaps = 10/313 (3%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +    E WM++  + Y+   EK +RF++FK N + I++ N+  +  Y L LNEFADL+
Sbjct: 41  DKLIELFESWMSRHGKIYETIEEKLLRFEVFKDNLKHIDERNKIVS-NYWLGLNEFADLS 99

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
            +EF   + G K+   N+S + +S     F Y D    LP+S+DWR +GAVTPVKNQG C
Sbjct: 100 HQEFKNKYLGLKV---NLSQRRESSNEEEFTYRDV--DLPKSVDWRKKGAVTPVKNQGQC 154

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGL 197
           G CW FS VAAVEGI +I TG L SLSEQ+++DC  +   GC GG MD AFS+I+++ GL
Sbjct: 155 GSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDTTYNNGCNGGLMDYAFSFIVQNGGL 214

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPG 256
             E  YPY   E  C  ++   +   I  Y DVP  +E +L  A++ QP+SVAI+ASS  
Sbjct: 215 HKEDDYPYIMEESTCEMKKEETQVVTINGYHDVPQNNEQSLLKALANQPLSVAIEASSRD 274

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG- 315
           F++YSGGVF G CG++L+H V+ VGYG+S    Y ++KNSWG  WGE GFIRM+R++G  
Sbjct: 275 FQFYSGGVFDGHCGSDLDHGVSAVGYGTSKNLDYIIVKNSWGAKWGEKGFIRMKRNIGKP 334

Query: 316 AGLCGIARKASYP 328
            G+CG+ + ASYP
Sbjct: 335 EGICGLYKMASYP 347


>gi|146215990|gb|ABQ10197.1| actinidin Act4a [Actinidia eriantha]
          Length = 385

 Score =  293 bits (751), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 144/314 (45%), Positives = 204/314 (64%), Gaps = 11/314 (3%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D + A  E W+ +  ++Y    EK  RF+IFK N RF+++ N + N++YK+ LN+F+DLT
Sbjct: 42  DEVIAMFESWLVEYGKSYNALGEKERRFEIFKDNLRFVDEHNADVNRSYKVGLNQFSDLT 101

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
           D E+ + + G K   R ++N S  Y       P     LP S+DWR +GAV  VKNQG+C
Sbjct: 102 DAEYSSIYLGTKFNIR-MTNVSDRYE------PRVGDQLPDSVDWRKKGAVLGVKNQGNC 154

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQG 196
           G CW F+++AAVEGI KI TG LISLSEQ+++DC     + GC GG +  A+ +II + G
Sbjct: 155 GSCWTFASIAAVEGINKIVTGNLISLSEQEIVDCQRKYPNNGCNGGTLSGAYQFIINNGG 214

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSP 255
           +  E  YPY  R+G C+  +   K   I  Y++VP++ E AL+ AV+ QPVSV I ++S 
Sbjct: 215 INTEANYPYTGRDGVCDQNKKNKKYVTIDRYENVPSNNEKALQKAVAFQPVSVVIASNST 274

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG 315
            F+ Y  G+F GPCG  ++H VTIVGYG+     YW+++NSWG NWGE G++RM+R+VGG
Sbjct: 275 AFKSYKSGIFNGPCGPRIDHGVTIVGYGTEGGKDYWIVRNSWGPNWGESGYVRMQRNVGG 334

Query: 316 AGLCGIARKASYPI 329
           +G C IAR   YP+
Sbjct: 335 SGKCFIARAPVYPV 348


>gi|400180387|gb|AFP73332.1| cysteine protease [Solanum peruvianum]
          Length = 344

 Score =  293 bits (751), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 148/332 (44%), Positives = 211/332 (63%), Gaps = 8/332 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  ++  + +    R+  + S+S +HELWM++  R YK++ EK  RF IFK+N +FIE  
Sbjct: 14  LFFVISMFNTQTRGRSQPKLSVSERHELWMSRHGRVYKDEVEKVERFMIFKENMKFIESV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLP 119
           N+ GN +YKL +NEFAD+T +EF+A  TG  +P   +S    S         D S   +P
Sbjct: 74  NKAGNLSYKLGMNEFADITSQEFLAKFTGLNIPNSYLSPSPMSSTE--LKINDLSDDDMP 131

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-G 178
            ++DW   GAVT VK+QG CGCCW FSAV ++EG  KI TG L+  SEQ++LDC+ +  G
Sbjct: 132 SNLDWIESGAVTQVKHQGRCGCCWAFSAVGSLEGAYKIATGNLMEFSEQELLDCTTNNYG 191

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALR 238
           C GG+M +AF +I  + G++ E  Y Y   +  C  Q     A +I SYQ VP  E +L 
Sbjct: 192 CNGGFMTNAFDFIKENGGISRESDYEYLGEQYTCRSQE-KTAAVQISSYQVVPEGETSLL 250

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            AV++QPVS+ I A+S   ++Y+GG + G C + +NHAVT +GYG+  +G  YWL+KNSW
Sbjct: 251 QAVTKQPVSIGI-AASQDLQFYAGGTYDGSCADRINHAVTAIGYGTDEKGQKYWLLKNSW 309

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE GF+++ RD G  AGLC IA+ +SYP
Sbjct: 310 GTSWGENGFMKIIRDYGNPAGLCDIAKMSSYP 341


>gi|109390302|gb|ABG33750.1| cysteine protease [Hevea brasiliensis]
          Length = 457

 Score =  293 bits (750), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 152/315 (48%), Positives = 206/315 (65%), Gaps = 9/315 (2%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           +D + A +E W+ +  + Y +  EK  RF++FK N RFI++ N E N+TY++ LN FADL
Sbjct: 35  DDEVMAIYEDWLVKHGKAYNSLGEKERRFEVFKDNLRFIDEHNSE-NRTYRVGLNRFADL 93

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
           T+EE+ + + G     R   N+ +  ++ +   P     LP S+DWR  GAV  VK+QGS
Sbjct: 94  TNEEYRSMYLGALSGIRR--NKLRKISDRY--TPRVGDSLPDSVDWRKEGAVVGVKDQGS 149

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQG 196
           CG CW FSAVAAVEGI KI TG LISLSEQ+++DC  S   GC GG MD  F +II + G
Sbjct: 150 CGSCWAFSAVAAVEGINKIVTGDLISLSEQELVDCDNSYNEGCNGGLMDYGFEFIINNGG 209

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSP 255
           +  E  YPY  R+G C+  R   +   I SY+DVP + E AL+ AV+ QPVSVAI+A   
Sbjct: 210 IDSEEDYPYLARDGRCDTYRKNARVVSIDSYEDVPVNNEAALQKAVANQPVSVAIEAGGR 269

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV-G 314
            F+ YS GVF+G CG  L+H V  VGYG+ N   YW+++NSWG++WGE G++RM R++  
Sbjct: 270 DFQLYSSGVFSGRCGTALDHGVVAVGYGTENGQDYWIVRNSWGKSWGESGYLRMARNIRK 329

Query: 315 GAGLCGIARKASYPI 329
             G+CGIA +ASYPI
Sbjct: 330 PTGICGIAMEASYPI 344


>gi|18394919|ref|NP_564126.1| Xylem cysteine proteinase 2 [Arabidopsis thaliana]
 gi|71153409|sp|Q9LM66.2|XCP2_ARATH RecName: Full=Xylem cysteine proteinase 2; Short=AtXCP2; Flags:
           Precursor
 gi|4836904|gb|AAD30607.1|AC007369_17 Putative cysteine proteinase [Arabidopsis thaliana]
 gi|6708183|gb|AAF25832.1|AF191028_1 papain-type cysteine endopeptidase XCP2 [Arabidopsis thaliana]
 gi|28466959|gb|AAO44088.1| At1g20850 [Arabidopsis thaliana]
 gi|110743795|dbj|BAE99733.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|332191910|gb|AEE30031.1| Xylem cysteine proteinase 2 [Arabidopsis thaliana]
          Length = 356

 Score =  293 bits (750), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 203/313 (64%), Gaps = 9/313 (2%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +    E W++   + Y+   EK +RF++FK N + I++ N++G ++Y L LNEFADL+
Sbjct: 45  DKLIELFENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKG-KSYWLGLNEFADLS 103

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
            EEF   + G K       ++ +SYA   F Y D    +P+S+DWR +GAV  VKNQGSC
Sbjct: 104 HEEFKKMYLGLKTDIVR-RDEERSYAE--FAYRDVE-AVPKSVDWRKKGAVAEVKNQGSC 159

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGL 197
           G CW FS VAAVEGI KI TG L +LSEQ+++DC  +   GC GG MD AF YI+++ GL
Sbjct: 160 GSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDTTYNNGCNGGLMDYAFEYIVKNGGL 219

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPG 256
             E  YPY   EG C  Q+   +   I  +QDVPT+ E +L  A++ QP+SVAIDAS   
Sbjct: 220 RKEEDYPYSMEEGTCEMQKDESETVTINGHQDVPTNDEKSLLKALAHQPLSVAIDASGRE 279

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG- 315
           F++YSGGVF G CG +L+H V  VGYGSS    Y ++KNSWG  WGE G+IR++R+ G  
Sbjct: 280 FQFYSGGVFDGRCGVDLDHGVAAVGYGSSKGSDYIIVKNSWGPKWGEKGYIRLKRNTGKP 339

Query: 316 AGLCGIARKASYP 328
            GLCGI + AS+P
Sbjct: 340 EGLCGINKMASFP 352


>gi|115461667|ref|NP_001054433.1| Os05g0108600 [Oryza sativa Japonica Group]
 gi|14719319|gb|AAK73137.1|AC079022_10 putative cysteine proteinase [Oryza sativa]
 gi|33151125|gb|AAP97431.1| cysteine protease CP1 [Oryza sativa]
 gi|52353572|gb|AAU44138.1| cysteine proteinase CP1 [Oryza sativa Japonica Group]
 gi|113577984|dbj|BAF16347.1| Os05g0108600 [Oryza sativa Japonica Group]
 gi|125550541|gb|EAY96250.1| hypothetical protein OsI_18148 [Oryza sativa Indica Group]
          Length = 358

 Score =  293 bits (750), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 159/315 (50%), Positives = 203/315 (64%), Gaps = 11/315 (3%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +    E W+A+  + Y +  EK  RF++FK N   I+  N++   +Y L LNEFADLT
Sbjct: 45  DRLIELFEKWVAKYRKAYASFEEKVRRFEVFKDNLNHIDDINKK-VTSYWLGLNEFADLT 103

Query: 80  DEEFIASHTGYKMP-TRNISNQSQSYANNWFGYPDSRRG-LPRSIDWRARGAVTPVKNQG 137
            +EF A++ G   P TR+    S+ Y++  F Y     G +P+ +DWR + AVT VKNQG
Sbjct: 104 HDEFKATYLGLTPPPTRS---NSKHYSSEEFRYGKMSNGEVPKEMDWRKKNAVTEVKNQG 160

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYIIRSQ 195
            CG CW FS VAAVEGI  I TG L SLSEQ+++DCS  G+ GC GG MD AFSYI  + 
Sbjct: 161 QCGSCWAFSTVAAVEGINAIVTGNLTSLSEQELIDCSTDGNNGCNGGLMDYAFSYIASTG 220

Query: 196 GLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASS 254
           GL  E  YPY   EG C+  +GA     I  Y+DVP + E AL  A++ QPVSVAI+AS 
Sbjct: 221 GLRTEEAYPYAMEEGDCDEGKGAA-VVTISGYEDVPANDEQALVKALAHQPVSVAIEASG 279

Query: 255 PGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG 314
             F++YSGGVF GPCG  L+H VT VGYG+S    Y ++KNSWG +WGE G+IRM+R  G
Sbjct: 280 RHFQFYSGGVFDGPCGEQLDHGVTAVGYGTSKGQDYIIVKNSWGPHWGEKGYIRMKRGTG 339

Query: 315 -GAGLCGIARKASYP 328
            G GLCGI + ASYP
Sbjct: 340 KGEGLCGINKMASYP 354


>gi|297802418|ref|XP_002869093.1| hypothetical protein ARALYDRAFT_491113 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314929|gb|EFH45352.1| hypothetical protein ARALYDRAFT_491113 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 355

 Score =  293 bits (749), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 155/306 (50%), Positives = 197/306 (64%), Gaps = 10/306 (3%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           E WM++ ++ YK+  EK  RF++F++N   I++ N E N +Y L LNEFADLT EEF   
Sbjct: 52  ESWMSEHSKVYKSVEEKVHRFEVFRENLMHIDQRNNEIN-SYWLGLNEFADLTHEEFKGR 110

Query: 87  HTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFS 146
           + G   P    S + Q  AN  F Y D    LP+S+DWR +GAV PVK+QG CG CW FS
Sbjct: 111 YLGLAKP--QFSRKRQPSAN--FRYRDIT-DLPKSVDWRKKGAVAPVKDQGQCGSCWAFS 165

Query: 147 AVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERVYP 204
            VAAVEGI +I TG L SLSEQ+++DC  +   GC GG MD AF YII + GL  E  YP
Sbjct: 166 TVAAVEGINQITTGNLSSLSEQELIDCDTTFNSGCNGGLMDYAFQYIISTGGLHKEDDYP 225

Query: 205 YQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGG 263
           Y   EG C  Q+  ++   I  Y+DVP   + +L  A++ QPVSVAI+AS   F++Y GG
Sbjct: 226 YLMEEGICQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRDFQFYKGG 285

Query: 264 VFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIA 322
           VF G CG +L+H V  VGYGSS    Y ++KNSWG  WGE GFIRM+R+ G   GLCGI 
Sbjct: 286 VFNGQCGTDLDHGVAAVGYGSSKGSDYVIVKNSWGPRWGEKGFIRMKRNTGKPEGLCGIN 345

Query: 323 RKASYP 328
           + ASYP
Sbjct: 346 KMASYP 351


>gi|359483514|ref|XP_003632971.1| PREDICTED: LOW QUALITY PROTEIN: oryzain beta chain-like [Vitis
           vinifera]
          Length = 340

 Score =  293 bits (749), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 155/328 (47%), Positives = 214/328 (65%), Gaps = 11/328 (3%)

Query: 9   ASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTY 68
           AS   SR LHE S+  +HE WMA+ +R YK+ AE+  RF +FK N  FI+ F+  GN   
Sbjct: 18  ASEATSRPLHEASMYERHEQWMARYSRNYKDDAEEERRFXMFKDNVDFIQTFDTAGNMPN 77

Query: 69  KLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARG 128
           KL +N  AD+T EEF AS   +K+P  N+  +S++ +   F + +  R +P ++DWR + 
Sbjct: 78  KLGVNALADMTHEEFRASGNTFKIPP-NLGLRSETTS---FRHQNVTR-IPSTMDWRKKR 132

Query: 129 AVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSR-GCYGGWMD 185
            VT +KNQ  CG CW FSAVAA+EGI K++T + ISLSEQ+++DC   GS  GC GG MD
Sbjct: 133 TVTHIKNQLQCGGCWAFSAVAAMEGIAKLQTSKSISLSEQELVDCDIFGSNIGCEGGCMD 192

Query: 186 DAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ 244
           DAF +II+++GL  E  Y Y+  EG+CN ++ + +AARI  Y+++P  SE AL   V+ Q
Sbjct: 193 DAFKFIIQNRGLNSEARYLYKGVEGHCNKKKESSRAARINDYENMPEFSEKALLKVVAHQ 252

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGE 303
           P+SVAIDA    F++Y  G+     GN+L++ VT  GYG S +G  +WL+KNSWG +WGE
Sbjct: 253 PISVAIDAGGSAFQFYEIGIITXESGNDLDYGVTTDGYGRSADGKKHWLVKNSWGTDWGE 312

Query: 304 GGFIRMRRDVGG-AGLCGIARKASYPIA 330
            G+ RM R V    GLCG   +ASYP A
Sbjct: 313 NGYTRMERGVKATTGLCGFTMQASYPTA 340


>gi|2463588|dbj|BAA22546.1| FB1035 precursor [Ananas comosus]
          Length = 324

 Score =  292 bits (748), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 149/313 (47%), Positives = 199/313 (63%), Gaps = 13/313 (4%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +  + E WMA+  R YK+  EK  RF+IFK N + IE FN     +Y L +N+F D+T
Sbjct: 4   DPMMKRFEEWMAEYGRIYKDNDEKMRRFQIFKNNVKHIETFNSRNGNSYTLGINQFTDMT 63

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSR-RGLPRSIDWRARGAVTPVKNQGS 138
             EF+A +TG  +P  NI  +          + D     +P+SIDWR  GAV  VKNQ  
Sbjct: 64  KSEFVAQYTGVSLPL-NIEREPV------VSFDDVNISAVPQSIDWRDYGAVNEVKNQNP 116

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRGCYGGWMDDAFSYIIRSQGLT 198
           CG CW F+A+A VEGI KI+TG L+SLSEQ+VLDC+ S GC GGW++ A+ +II + G+T
Sbjct: 117 CGSCWAFAAIATVEGIYKIKTGYLVSLSEQEVLDCAVSYGCKGGWVNKAYDFIISNNGVT 176

Query: 199 DERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGF 257
            E  YPYQ  +G CN       +A I  Y  V    E ++ YAVS QP++  IDAS   F
Sbjct: 177 TEENYPYQAYQGTCN-ANSFPNSAYITGYSYVRRNDERSMMYAVSNQPIAALIDASE-NF 234

Query: 258 RYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRDV-GG 315
           +YY+GGVF+GPCG +LNHA+TI+GYG  + G  YW+++NSWG +WGEGG++RM R V   
Sbjct: 235 QYYNGGVFSGPCGTSLNHAITIIGYGQDSSGTKYWIVRNSWGSSWGEGGYVRMARGVSSS 294

Query: 316 AGLCGIARKASYP 328
           +G CGIA    +P
Sbjct: 295 SGACGIAMSPLFP 307


>gi|242092702|ref|XP_002436841.1| hypothetical protein SORBIDRAFT_10g009840 [Sorghum bicolor]
 gi|241915064|gb|EER88208.1| hypothetical protein SORBIDRAFT_10g009840 [Sorghum bicolor]
          Length = 328

 Score =  292 bits (748), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 151/327 (46%), Positives = 211/327 (64%), Gaps = 32/327 (9%)

Query: 12  VMSRTLHEDS-ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKL 70
           + +R L++DS + A+HE WM Q +R YK+  EKA RF++FK N +FIE FN  GN+ + L
Sbjct: 22  LAARDLNDDSAMVARHEQWMVQYSRVYKDTTEKARRFEVFKANVKFIESFNAGGNRKFWL 81

Query: 71  SLNEFADLTDEEFIASHT--GYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRAR 127
            +N+FADLT++EF A+ T  G+K     +S          F Y + S   LP +IDWR +
Sbjct: 82  GVNQFADLTNDEFRATKTNKGFKPSPVKVSTG--------FRYENVSVDALPATIDWRTK 133

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWM 184
           GAVTP+K+QG C            EGI KI TG+LISLSEQ+++DC      +GC GG M
Sbjct: 134 GAVTPIKDQGQC------------EGIVKISTGKLISLSEQELVDCDVHGEDQGCEGGLM 181

Query: 185 DDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSR 243
           DDAF +II++ GLT E  YPY   +G C  + G+  AA ++ ++DVP + E AL  AV+ 
Sbjct: 182 DDAFKFIIKNGGLTTESSYPYTAADGKC--KSGSNSAATVKGFEDVPANDEAALMKAVAN 239

Query: 244 QPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWG 302
           QPVSVA+D     F++YSGGV  G CG +L+H +  +GYG +++G  YWL+KNSWG  WG
Sbjct: 240 QPVSVAVDGGDMTFQFYSGGVMTGSCGTDLDHGIAAIGYGQTSDGTKYWLLKNSWGTTWG 299

Query: 303 EGGFIRMRRDVGGA-GLCGIARKASYP 328
           E G++RM +D+    G+CG+A + SYP
Sbjct: 300 ENGYLRMEKDISDKRGMCGLAMEPSYP 326


>gi|18418684|ref|NP_567983.1| Xylem cysteine proteinase 1 [Arabidopsis thaliana]
 gi|71153408|sp|O65493.1|XCP1_ARATH RecName: Full=Xylem cysteine proteinase 1; Short=AtXCP1; Flags:
           Precursor
 gi|6708181|gb|AAF25831.1|AF191027_1 papain-type cysteine endopeptidase XCP1 [Arabidopsis thaliana]
 gi|3080415|emb|CAA18734.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|7270487|emb|CAB80252.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|26449881|dbj|BAC42063.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|28827736|gb|AAO50712.1| unknown protein [Arabidopsis thaliana]
 gi|332661101|gb|AEE86501.1| Xylem cysteine proteinase 1 [Arabidopsis thaliana]
          Length = 355

 Score =  292 bits (748), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 156/313 (49%), Positives = 199/313 (63%), Gaps = 10/313 (3%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +    E WM++ ++ YK+  EK  RF++F++N   I++ N E N +Y L LNEFADLT
Sbjct: 45  DKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRNNEIN-SYWLGLNEFADLT 103

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
            EEF   + G   P    S + Q  AN  F Y D    LP+S+DWR +GAV PVK+QG C
Sbjct: 104 HEEFKGRYLGLAKP--QFSRKRQPSAN--FRYRDIT-DLPKSVDWRKKGAVAPVKDQGQC 158

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGL 197
           G CW FS VAAVEGI +I TG L SLSEQ+++DC  +   GC GG MD AF YII + GL
Sbjct: 159 GSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCDTTFNSGCNGGLMDYAFQYIISTGGL 218

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPG 256
             E  YPY   EG C  Q+  ++   I  Y+DVP   + +L  A++ QPVSVAI+AS   
Sbjct: 219 HKEDDYPYLMEEGICQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRD 278

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA 316
           F++Y GGVF G CG +L+H V  VGYGSS    Y ++KNSWG  WGE GFIRM+R+ G  
Sbjct: 279 FQFYKGGVFNGKCGTDLDHGVAAVGYGSSKGSDYVIVKNSWGPRWGEKGFIRMKRNTGKP 338

Query: 317 -GLCGIARKASYP 328
            GLCGI + ASYP
Sbjct: 339 EGLCGINKMASYP 351


>gi|242092700|ref|XP_002436840.1| hypothetical protein SORBIDRAFT_10g009830 [Sorghum bicolor]
 gi|241915063|gb|EER88207.1| hypothetical protein SORBIDRAFT_10g009830 [Sorghum bicolor]
          Length = 328

 Score =  292 bits (747), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 151/328 (46%), Positives = 211/328 (64%), Gaps = 32/328 (9%)

Query: 12  VMSRTLHEDS-ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKL 70
           + +R L++DS + A+HE WM Q +R YK+  EKA RF++FK N +FIE FN  GN+ + L
Sbjct: 22  LAARDLNDDSAMVARHEQWMVQYSRVYKDTTEKARRFEVFKANVKFIESFNAGGNRKFWL 81

Query: 71  SLNEFADLTDEEFIASHT--GYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRAR 127
            +N+FADLT++EF A+ T  G+K     +           F Y + S   LP +IDWR +
Sbjct: 82  GVNQFADLTNDEFRATKTNKGFKPSPVKVPTG--------FRYENVSVDALPATIDWRTK 133

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWM 184
           GAVTP+K+QG C            EGI KI TG+LISLSEQ+++DC      +GC GG M
Sbjct: 134 GAVTPIKDQGQC------------EGIVKISTGKLISLSEQELVDCDVHGEDQGCEGGLM 181

Query: 185 DDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSR 243
           DDAF +II++ GLT E  YPY   +G C  + G+  AA ++ ++DVP + E AL  AV+ 
Sbjct: 182 DDAFQFIIKNGGLTTESSYPYTAADGKC--KSGSNSAATVKGFEDVPANDEAALMKAVAN 239

Query: 244 QPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWG 302
           QPVSVA+D     F++YSGGV  G CG +L+H +  +GYG +++G  YWL+KNSWG  WG
Sbjct: 240 QPVSVAVDGGDMTFQFYSGGVMTGSCGTDLDHGIAAIGYGQTSDGTKYWLLKNSWGTTWG 299

Query: 303 EGGFIRMRRDVGGA-GLCGIARKASYPI 329
           E G++RM +D+    G+CG+A + SYPI
Sbjct: 300 ENGYLRMEKDISDKRGMCGLAMEPSYPI 327


>gi|146215996|gb|ABQ10200.1| cysteine protease Cp2 [Actinidia deliciosa]
          Length = 376

 Score =  291 bits (746), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 149/321 (46%), Positives = 208/321 (64%), Gaps = 10/321 (3%)

Query: 14  SRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLN 73
           SRT  ++ +   +  W+A+  + Y    E+  RF+IFK N +F+++ N E N++YK+ LN
Sbjct: 37  SRT--DEEVMGIYAEWLAKHGKAYNGIGERERRFEIFKDNLKFVDEHNSE-NRSYKVGLN 93

Query: 74  EFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPV 133
            FADLT+EE+ +   G K  ++    +S+S A+  +   DS   LP S+DWR  GAV P+
Sbjct: 94  RFADLTNEEYRSMFLGTKTDSKRRFMKSKS-ASRRYAVQDSDM-LPESVDWRESGAVAPI 151

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYI 191
           K+QGSCG CW FS VAAVEG+ +I TG +I LSEQ+++DC  +   GC GG MD AF +I
Sbjct: 152 KDQGSCGSCWAFSTVAAVEGVNQIATGEMIQLSEQELVDCDRTYDAGCNGGLMDYAFEFI 211

Query: 192 IRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAI 250
           I + G+  E  YPY+  +G C+ +R   K   I  Y+DVP   E+AL+ AV+ QPVSVAI
Sbjct: 212 INNGGIDTEEDYPYRGVDGTCDPERKNTKVVSINDYEDVPPYDEMALKKAVAHQPVSVAI 271

Query: 251 DASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMR 310
           +AS   F+ Y  GVF G CG  L+H V +VGYG+ N   +W+++NSWG +WGE G+IRM 
Sbjct: 272 EASGRAFQLYLSGVFTGECGRALDHGVVVVGYGTDNGADHWIVRNSWGTSWGENGYIRME 331

Query: 311 RDV--GGAGLCGIARKASYPI 329
           R+V     G CGIA +ASYPI
Sbjct: 332 RNVVDNFGGKCGIAMQASYPI 352


>gi|13897890|gb|AAK48495.1|AF259983_1 putative cysteine protease [Ipomoea batatas]
          Length = 462

 Score =  291 bits (746), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 153/318 (48%), Positives = 206/318 (64%), Gaps = 14/318 (4%)

Query: 19  EDSISAKHELWMAQSARTYKNQA-EKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFAD 77
           ++ + A +E W+ +  ++Y     EK  RF+IFK N R+I++ N  G+++YKL LN FAD
Sbjct: 42  DEEVMALYESWLVEHGKSYNGLGGEKDKRFEIFKDNLRYIDEQNSRGDRSYKLGLNRFAD 101

Query: 78  LTDEEFIASHTGYKMPTRNISNQSQS---YANNWFGYPDSRRGLPRSIDWRARGAVTPVK 134
           LT+EE+ +++ G K   R    +++S   YA      P +   LP SIDWR +GAV  VK
Sbjct: 102 LTNEEYRSTYLGAKTDARRRIAKTKSDRRYA------PKAGGSLPDSIDWREKGAVAEVK 155

Query: 135 NQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYII 192
           +QGSCG CW FS +AAVEGI +I TG LISLSEQ+++DC  S   GC GG MD AF +II
Sbjct: 156 DQGSCGSCWAFSTIAAVEGINQIVTGELISLSEQELVDCDTSYNEGCNGGLMDYAFEFII 215

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAID 251
           ++ G+  E  YPY  R G C+  R   K   I  Y+DV P  E AL+ AV+ QPVSVAI+
Sbjct: 216 KNGGIDTEADYPYTGRYGRCDQTRKNAKVVSIDGYEDVTPYDEAALKEAVAGQPVSVAIE 275

Query: 252 ASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRR 311
           A    F+ YS G+F G CG +L+H VT VGYG+ N   YW++KNSW  +WGE G++RM+R
Sbjct: 276 AGGRDFQLYSSGIFTGSCGTDLDHGVTAVGYGTENGVDYWIVKNSWAASWGEKGYLRMQR 335

Query: 312 DVGGA-GLCGIARKASYP 328
           +V    GLCGIA + SYP
Sbjct: 336 NVKDKNGLCGIAIEPSYP 353


>gi|13432122|sp|P80884.2|ANAN_ANACO RecName: Full=Ananain; Flags: Precursor
 gi|2623956|emb|CAA05487.1| Ananain precursor [Ananas comosus]
          Length = 345

 Score =  291 bits (746), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 152/333 (45%), Positives = 205/333 (61%), Gaps = 14/333 (4%)

Query: 1   MLIIMVTWASL-VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
            L + V WAS    S     D +  + E WMA+  R YK+  EK +RF+IFK N   IE 
Sbjct: 11  FLFLCVMWASPSAASCDEPSDPMMKQFEEWMAEYGRVYKDNDEKMLRFQIFKNNVNHIET 70

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGL 118
           FN     +Y L +N+F D+T+ EF+A +TG  +P  NI  +          + D     +
Sbjct: 71  FNNRNGNSYTLGINQFTDMTNNEFVAQYTGLSLPL-NIKREPV------VSFDDVDISSV 123

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRG 178
           P+SIDWR  GAVT VKNQG CG CW F+++A VE I KI+ G L+SLSEQQVLDC+ S G
Sbjct: 124 PQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDCAVSYG 183

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELAL 237
           C GGW++ A+S+II ++G+    +YPY+  +G C    G   +A I  Y  V   +E  +
Sbjct: 184 CKGGWINKAYSFIISNKGVASAAIYPYKAAKGTCK-TNGVPNSAYITRYTYVQRNNERNM 242

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNS 296
            YAVS QP++ A+DAS   F++Y  GVF GPCG  LNHA+ I+GYG  + G  +W+++NS
Sbjct: 243 MYAVSNQPIAAALDASG-NFQHYKRGVFTGPCGTRLNHAIVIIGYGQDSSGKKFWIVRNS 301

Query: 297 WGQNWGEGGFIRMRRDVGGA-GLCGIARKASYP 328
           WG  WGEGG+IR+ RDV  + GLCGIA    YP
Sbjct: 302 WGAGWGEGGYIRLARDVSSSFGLCGIAMDPLYP 334


>gi|194352750|emb|CAQ00103.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
 gi|326514262|dbj|BAJ92281.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519402|dbj|BAJ96700.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326524351|dbj|BAK00559.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326531998|dbj|BAK01375.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 356

 Score =  291 bits (745), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 160/311 (51%), Positives = 200/311 (64%), Gaps = 17/311 (5%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           E W+A+  + Y +  EK  RF++FK N + I+K NRE   +Y L LNEFADLT +EF A+
Sbjct: 50  EKWLAKHQKAYASFEEKLHRFEVFKDNLKHIDKINRE-VTSYWLGLNEFADLTHDEFKAA 108

Query: 87  HTGYKM-PTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRARGAVTPVKNQGSCGCCWI 144
           + G    P R  S++S       F Y D S   LP+S+DWR +GAVT VKNQG CG CW 
Sbjct: 109 YLGLDAAPARRGSSRS-------FRYEDVSASDLPKSVDWRKKGAVTEVKNQGQCGSCWA 161

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYIIRSQGLTDERV 202
           FS VAAVEGI  I TG L +LSEQ+++DCS  G+ GC GG MD AFSYI  S GL  E  
Sbjct: 162 FSTVAAVEGINAIVTGNLTALSEQELIDCSVDGNSGCNGGLMDYAFSYIASSGGLHTEEA 221

Query: 203 YPYQRREGYC-NWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYY 260
           YPY   EG C + ++   +A  I  Y+DVP + E AL  A++ QPVSVAI+AS   F++Y
Sbjct: 222 YPYLMEEGSCGDGKKAESEAVTISGYEDVPANDEQALIKALAHQPVSVAIEASGRHFQFY 281

Query: 261 SGGVFAGPCGNNLNHAVTIVGYGSSNEG--PYWLIKNSWGQNWGEGGFIRMRRDV-GGAG 317
           SGGVF GPCG  L+H V  VGYGS       Y +++NSWG  WGE G+IRM+R    G G
Sbjct: 282 SGGVFDGPCGAQLDHGVAAVGYGSDKGKGHDYIIVRNSWGAQWGEKGYIRMKRGTSNGEG 341

Query: 318 LCGIARKASYP 328
           LCGI + ASYP
Sbjct: 342 LCGINKMASYP 352


>gi|297792329|ref|XP_002864049.1| hypothetical protein ARALYDRAFT_495086 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309884|gb|EFH40308.1| hypothetical protein ARALYDRAFT_495086 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 361

 Score =  291 bits (745), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 155/340 (45%), Positives = 211/340 (62%), Gaps = 19/340 (5%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMA----QSARTY-KNQAEKAMRFKIFKKNFR 55
           ML+++ T  SL      HE  + ++  LW      +S  T  ++  EKA RF +FK N +
Sbjct: 11  MLMVLETTKSL----DFHEKDVESEDSLWELYERWKSHHTIARSLEEKAKRFNVFKHNVK 66

Query: 56  FIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPT-RNISNQSQSYANNWFGYPDS 114
            I + N++ N +YKL LN+F D+T EEF  ++ G  +   R    + Q+  +  +   D+
Sbjct: 67  HIHETNKKEN-SYKLKLNKFGDMTSEEFRRTYAGSNIKHHRMFQGERQTTKSFMYANVDT 125

Query: 115 RRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS 174
              LP S+DWR  GAVTPVKNQG CG CW FS V AVEGI +IRT +L SLSEQ+++DC 
Sbjct: 126 ---LPTSVDWRKNGAVTPVKNQGQCGSCWAFSTVVAVEGINQIRTKKLTSLSEQELVDCD 182

Query: 175 GSR--GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP- 231
            ++  GC GG MD AF +I    GLT E VYPY+  +  C+  +       I  ++DVP 
Sbjct: 183 TNKNQGCNGGLMDLAFEFIKEKGGLTSELVYPYKASDETCDTNKENAPVVSIDGHEDVPK 242

Query: 232 TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PY 290
            SE+ L  AV+ QPVSVAIDA    F++YS GVF G CG  LNH V +VGYG++ +G  Y
Sbjct: 243 NSEVDLMKAVAHQPVSVAIDAGGSDFQFYSEGVFTGRCGTELNHGVAVVGYGTTIDGTKY 302

Query: 291 WLIKNSWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPI 329
           W++KNSWG+ WGE G+IRM+R +    GLCGIA +ASYP+
Sbjct: 303 WIVKNSWGEEWGEKGYIRMQRGIRHKEGLCGIAMEASYPL 342


>gi|37780039|gb|AAP32192.1| cysteine protease 14 [Trifolium repens]
          Length = 351

 Score =  291 bits (745), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 149/313 (47%), Positives = 203/313 (64%), Gaps = 10/313 (3%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +    E WM++  + Y+   EK +RF++FK N + I+  N+  +  Y L LNEFADL+
Sbjct: 41  DKLIELFESWMSRHGKIYETIEEKLLRFEVFKDNLKHIDDRNKIVS-NYWLGLNEFADLS 99

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
            +EF   + G K+   ++S + +S     F Y D    LP+S+DWR +GAVTPVKNQG C
Sbjct: 100 HQEFKNKYLGLKV---DLSQRRESSNEEEFTYRDV--DLPKSVDWRKKGAVTPVKNQGQC 154

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGL 197
           G CW FS VAAVEGI +I TG L SLSEQ+++DC  +   GC GG MD AFS+I ++ GL
Sbjct: 155 GSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDTTYNNGCNGGLMDYAFSFIGQNGGL 214

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPG 256
             E  YPY   E  C  ++   +   I  Y DVP  +E +L  A++ QP+SVAI+ASS  
Sbjct: 215 HKEEDYPYIMEESTCEMKKEETQVVTINGYHDVPQNNEQSLLKALANQPLSVAIEASSRD 274

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG- 315
           F++YSGGVF G CG++L+H V+ VGYG+S    Y ++KNSWG  WGE GFIRM+RD+G  
Sbjct: 275 FQFYSGGVFDGHCGSDLDHGVSAVGYGTSKNLDYIIVKNSWGAKWGEKGFIRMKRDIGKP 334

Query: 316 AGLCGIARKASYP 328
            G+CG+ + ASYP
Sbjct: 335 EGICGLYKMASYP 347


>gi|449448298|ref|XP_004141903.1| PREDICTED: germination-specific cysteine protease 1-like [Cucumis
           sativus]
 gi|449531757|ref|XP_004172852.1| PREDICTED: germination-specific cysteine protease 1-like [Cucumis
           sativus]
          Length = 365

 Score =  291 bits (744), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 16/313 (5%)

Query: 26  HELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIA 85
           ++LW+A+  + Y    E+  RF+IFK+N +FI+  N E N+TYK+ LN FADLT+EE+ A
Sbjct: 35  YDLWLAKHGKAYNGIDEREKRFQIFKENLKFIDDHNSE-NRTYKVGLNMFADLTNEEYRA 93

Query: 86  SHTGYKMP----TRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGC 141
            + G + P           S+ YA N          LP S+DWR RGAV PVKNQGSCG 
Sbjct: 94  LYLGTRSPPARRVMKAKTASRRYAVNNLDR------LPESMDWRTRGAVAPVKNQGSCGS 147

Query: 142 CWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSYIIRSQGLTD 199
           CW FS +AAVEGI +I TG LISLSEQ+++ C    + GC GG MD AF +II + GL  
Sbjct: 148 CWAFSTIAAVEGINQIVTGELISLSEQELVSCDKKYNSGCNGGLMDYAFQFIIDNGGLDT 207

Query: 200 ERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFR 258
           E  YPY+  +G C+  R   K   I +Y+DVP + E +L+ AV+ QPVSVAI+AS    +
Sbjct: 208 EEDYPYEAFDGQCDPTRKNAKVVSIDAYEDVPANDEESLKKAVAHQPVSVAIEASGLALQ 267

Query: 259 YYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG--GA 316
            Y  GVF G CG+ L+H V  VGYG  N   YWL++NSWG +WGE G+ ++ R+V     
Sbjct: 268 LYQSGVFTGKCGSALDHGVVAVGYGKENGVDYWLVRNSWGTSWGEDGYFKLERNVKHITE 327

Query: 317 GLCGIARKASYPI 329
           G CGIA +ASYP+
Sbjct: 328 GKCGIAMQASYPV 340


>gi|242086591|ref|XP_002439128.1| hypothetical protein SORBIDRAFT_09g000960 [Sorghum bicolor]
 gi|241944413|gb|EES17558.1| hypothetical protein SORBIDRAFT_09g000960 [Sorghum bicolor]
          Length = 371

 Score =  290 bits (743), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 156/317 (49%), Positives = 203/317 (64%), Gaps = 11/317 (3%)

Query: 17  LHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFA 76
           +H D +    E W+A+  + Y +  EK  RF++FK N   I++ N++   TY L LN FA
Sbjct: 57  VHHDRLIKLFEEWVAKYRKAYASFEEKLHRFEVFKDNLHHIDEANKKVT-TYWLGLNAFA 115

Query: 77  DLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQ 136
           DLT +EF A++ G + P    +  S+     + G  D    +P S+DWR +GAVT VKNQ
Sbjct: 116 DLTHDEFKATYLGLRQPETKKTTDSRF---RYGGVADDD--VPASVDWRKKGAVTDVKNQ 170

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYIIRS 194
           G CG CW FS VAAVEGI +I TG L SLSEQ+++DCS  G+ GC GG MD+AFSYI  S
Sbjct: 171 GQCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCSTDGNNGCNGGVMDNAFSYIASS 230

Query: 195 QGLTDERVYPYQRREGYCNWQ-RGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDA 252
            GL  E  YPY   EG C+ + R   +   I  Y+DVP + E AL  A++ QP+SVAI+A
Sbjct: 231 GGLRTEEAYPYLMEEGDCDDKARDGEQVVTISGYEDVPANDEQALVKALAHQPLSVAIEA 290

Query: 253 SSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRD 312
           S   F++YSGGVF GPCG+ L+H V  VGYGSS    Y ++KNSWG +WGE G+IRM+R 
Sbjct: 291 SGRHFQFYSGGVFNGPCGSELDHGVAAVGYGSSKGQDYIIVKNSWGSHWGEKGYIRMKRG 350

Query: 313 VGGA-GLCGIARKASYP 328
            G   GLCGI + ASYP
Sbjct: 351 TGKPEGLCGINKMASYP 367


>gi|148907299|gb|ABR16787.1| unknown [Picea sitchensis]
          Length = 372

 Score =  290 bits (743), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 153/317 (48%), Positives = 205/317 (64%), Gaps = 9/317 (2%)

Query: 19  EDSISAKHELWMAQSARTYK-NQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFAD 77
           ++S+   ++ W  Q   T   +  E A RF+IFK+N + I+  N++ +  YKL LN+FAD
Sbjct: 38  DESLRGLYDKWALQHRSTRSLDSDEHARRFEIFKENVKHIDSVNKK-DGPYKLGLNKFAD 96

Query: 78  LTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQG 137
           L++EEF A H   KM         +   +  F Y +S+R LP SIDWR +GAVTPVKNQG
Sbjct: 97  LSNEEFKAMHMTTKMEKHKSLRGDRGVESGSFMYQNSKR-LPASIDWRKKGAVTPVKNQG 155

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-GCYGGWMDDAFSYIIRSQG 196
            CG CW FS +A+VEGI  I+TG+L+SLSEQQ++DCS    GC GG MD+AF YII + G
Sbjct: 156 QCGSCWAFSTIASVEGINYIKTGKLVSLSEQQLVDCSKENAGCNGGLMDNAFQYIIDNGG 215

Query: 197 LTDERVYPYQRREGYCNWQRGAMK--AARIRSYQDVP-TSELALRYAVSRQPVSVAIDAS 253
           +  E  YPY    G C+  +   K  A  I  ++DVP  +E AL+ AV+ QPVS+AI+AS
Sbjct: 216 IVTEDEYPYTAEAGECSTTKIESKSIATIIDGFEDVPANNEGALKKAVAHQPVSIAIEAS 275

Query: 254 SPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRD 312
              F++YS GVF G CG  L+H V +VGYG S EG  YW+++NSWG  WGE G+IRM+R 
Sbjct: 276 GHDFQFYSTGVFTGKCGTELDHGVVVVGYGKSPEGINYWIVRNSWGPEWGEQGYIRMQRG 335

Query: 313 VGGA-GLCGIARKASYP 328
           +    G CGI+ +ASYP
Sbjct: 336 IEATEGKCGISMQASYP 352


>gi|60100207|gb|AAX13273.1| putative cysteine protease [Oryza sativa Japonica Group]
          Length = 349

 Score =  290 bits (743), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 153/320 (47%), Positives = 206/320 (64%), Gaps = 15/320 (4%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQ-TYKLSLNEFADLT 79
           +++ +HE WMA+  R Y + AEKA R ++F+ N  FIE  N   +Q  + L  N+FADLT
Sbjct: 35  AMAQRHERWMAKHGRAYADDAEKARRLEVFRDNVAFIESVNAAASQHKFWLEENQFADLT 94

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG-LPRSIDWRARGAVTPVKNQGS 138
           + EF A+ TG + P+ +  N++ +     F Y +   G LP S+DWR +GAV PVK+QG 
Sbjct: 95  NAEFRATRTGLR-PSSSRGNRAPTS----FRYANVSTGDLPASVDWRGKGAVNPVKDQGD 149

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQ 195
           CGCCW FSAVAA+EG  K+ TG+L+SLSEQQ++ C      +GC GG MDDAF +II++ 
Sbjct: 150 CGCCWAFSAVAAMEGAVKLATGKLVSLSEQQLVSCDVKGEDQGCEGGLMDDAFDFIIKNG 209

Query: 196 GLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASS 254
           GL  E  YPY   +  C        AA I+ Y+DVP + E AL  AV+ QPVSVAID   
Sbjct: 210 GLAAESDYPYTASDDKCATAGAGAAAATIKGYEDVPANDEAALLKAVANQPVSVAIDGGD 269

Query: 255 PGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRR 311
             F++Y GGV +G   C   L+HA+T VGYG +++G  YWL+KNSWG +WGE G++RM R
Sbjct: 270 RHFQFYKGGVLSGAAGCATELDHAITAVGYGVASDGTKYWLMKNSWGTSWGEDGYVRMER 329

Query: 312 DVGG-AGLCGIARKASYPIA 330
            V    G+CG+A  ASYP A
Sbjct: 330 GVADKEGVCGLAMMASYPTA 349


>gi|255538210|ref|XP_002510170.1| cysteine protease, putative [Ricinus communis]
 gi|223550871|gb|EEF52357.1| cysteine protease, putative [Ricinus communis]
          Length = 469

 Score =  290 bits (743), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 154/336 (45%), Positives = 210/336 (62%), Gaps = 12/336 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQ---AEKAMRFKIFKKNFRFI 57
           M I+      L  S    +D + A +E W+ ++ + + N     EK  RF++FK N RFI
Sbjct: 26  MSIVSYDQTHLTKSSWRTDDEVMAIYEEWLVKNGKAHSNNNALGEKERRFQVFKDNLRFI 85

Query: 58  EKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           ++ N E N++YK+ LN FADLT+EE+ + + G +   +   N+    +N +   P     
Sbjct: 86  DEHNSE-NRSYKVGLNRFADLTNEEYRSMYLGARSGAKR--NRLSRSSNRYL--PRVGDS 140

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS- 176
           LP S+DWR  GAV  VK+QGSCG CW FS +AAVEGI KI TG LISLSEQ+++DC  S 
Sbjct: 141 LPDSVDWRKEGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGDLISLSEQELVDCDRSY 200

Query: 177 -RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-E 234
             GC GG MD AF +II + G+  E  YPY  R+G C+  R   K   I +Y+DVP + E
Sbjct: 201 NEGCNGGLMDYAFQFIINNGGIDSEEDYPYLARDGTCDTYRKNAKVVTIDNYEDVPVNDE 260

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIK 294
            AL+ AV+ QPVSVAI+A    F++Y  G+F G CG  L+H V  VGYG+ N   YW+++
Sbjct: 261 KALQKAVANQPVSVAIEAGGREFQFYQSGIFTGRCGTALDHGVAAVGYGTENGKDYWIVR 320

Query: 295 NSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPI 329
           NSWG++WGE G+IRM R++  A G CGIA + SYPI
Sbjct: 321 NSWGKSWGESGYIRMERNIATATGKCGIAIEPSYPI 356


>gi|18422289|ref|NP_568620.1| Granulin repeat cysteine protease family protein [Arabidopsis
           thaliana]
 gi|9757832|dbj|BAB08269.1| cysteine protease component of protease-inhibitor complex
           [Arabidopsis thaliana]
 gi|17065064|gb|AAL32686.1| cysteine protease component of protease-inhibitor complex
           [Arabidopsis thaliana]
 gi|21387153|gb|AAM47980.1| cysteine protease component of protease-inhibitor complex
           [Arabidopsis thaliana]
 gi|332007522|gb|AED94905.1| Granulin repeat cysteine protease family protein [Arabidopsis
           thaliana]
          Length = 463

 Score =  290 bits (742), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 159/340 (46%), Positives = 209/340 (61%), Gaps = 21/340 (6%)

Query: 1   MLIIMVTWASLVMSRTLHEDS-ISAKHELWMAQSARTYKNQ----AEKAMRFKIFKKNFR 55
           M II       + + T   DS +   +E WM +  +   NQ    AEK  RF+IFK N R
Sbjct: 24  MSIISYDENHHITTETSRSDSEVERIYEAWMVEHGKKKMNQNGLGAEKDQRFEIFKDNLR 83

Query: 56  FIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSR 115
           FI++ N + N +YKL L  FADLT+EE+ + + G K PT+ +   S  Y         +R
Sbjct: 84  FIDEHNTK-NLSYKLGLTRFADLTNEEYRSMYLGAK-PTKRVLKTSDRY--------QAR 133

Query: 116 RG--LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
            G  LP S+DWR  GAV  VK+QGSCG CW FS + AVEGI KI TG LISLSEQ+++DC
Sbjct: 134 VGDALPDSVDWRKEGAVADVKDQGSCGSCWAFSTIGAVEGINKIVTGDLISLSEQELVDC 193

Query: 174 SGS--RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP 231
             S  +GC GG MD AF +II++ G+  E  YPY+  +G C+  R   K   I SY+DVP
Sbjct: 194 DTSYNQGCNGGLMDYAFEFIIKNGGIDTEADYPYKAADGRCDQNRKNAKVVTIDSYEDVP 253

Query: 232 -TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPY 290
             SE +L+ A++ QP+SVAI+A    F+ YS GVF G CG  L+H V  VGYG+ N   Y
Sbjct: 254 ENSEASLKKALAHQPISVAIEAGGRAFQLYSSGVFDGLCGTELDHGVVAVGYGTENGKDY 313

Query: 291 WLIKNSWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPI 329
           W+++NSWG  WGE G+I+M R++    G CGIA +ASYPI
Sbjct: 314 WIVRNSWGNRWGESGYIKMARNIEAPTGKCGIAMEASYPI 353


>gi|2511693|emb|CAB17076.1| cysteine proteinase precursor [Phaseolus vulgaris]
          Length = 455

 Score =  290 bits (742), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 153/318 (48%), Positives = 204/318 (64%), Gaps = 14/318 (4%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           ++ +++ +E W+ +  + Y    EK  RF+IFK N RFI++ N E N+TYKL LN FADL
Sbjct: 33  DEEVNSLYEEWLVKHGKLYNALGEKDKRFQIFKDNLRFIDQQNAE-NRTYKLGLNRFADL 91

Query: 79  TDEEFIASHTGYKM-PTRNIS-NQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQ 136
           T+EE+ A + G K+ P R +    S  YA      P     LP S+DWR  GAV PVK+Q
Sbjct: 92  TNEEYRARYLGTKIDPNRRLGRTPSNRYA------PRVGETLPDSVDWRKEGAVVPVKDQ 145

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSYIIRS 194
            SCG CW FSA+ AVEGI KI TG LISLSEQ+++DC    + GC GG MD AF +II++
Sbjct: 146 ASCGSCWAFSAIGAVEGINKIVTGDLISLSEQELVDCDTGYNMGCNGGLMDYAFEFIIKN 205

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDAS 253
            G+  E  YPY+  +G C+  R   K   I  Y+DV T  ELAL+ AV+ QPVSVA++  
Sbjct: 206 GGIDSEEDYPYKGVDGRCDEYRKNAKVVSIDGYEDVNTYDELALKKAVANQPVSVAVEGG 265

Query: 254 SPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV 313
              F+ YS GVF G CG  L+H V  VGYG+ N   +W+++NSWG +WGE G+IR+ R++
Sbjct: 266 GREFQLYSSGVFTGRCGTALDHGVVAVGYGTDNGHDFWIVRNSWGADWGEEGYIRLERNL 325

Query: 314 GG--AGLCGIARKASYPI 329
           G   +G CGIA + SYPI
Sbjct: 326 GNSRSGKCGIAIEPSYPI 343


>gi|5823020|gb|AAD53012.1|AF089849_1 senescence-specific cysteine protease [Brassica napus]
          Length = 344

 Score =  290 bits (742), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 148/325 (45%), Positives = 213/325 (65%), Gaps = 11/325 (3%)

Query: 11  LVMSR-TLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNR-EGNQTY 68
           + +SR  L E ++  +H  WM +  R Y +  EK  R+ +FK+N   IE+ N  +   T+
Sbjct: 22  ITLSRPLLDEVAMQKRHAEWMTEHGRVYADANEKNNRYAVFKRNVERIERLNDVQSGLTF 81

Query: 69  KLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRAR 127
           KL++N+FADLT+EEF + +TG+K  +  +S++++  +   F Y + S   LP S+DWR +
Sbjct: 82  KLAVNQFADLTNEEFRSMYTGFKGNSV-LSSRTKPTS---FRYQNVSSDALPVSVDWRKK 137

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDD 186
           GAVTP+K+QG CG CW FSAVAA+EG+ +I+ G+LISLSEQ+++DC +   GC GG MD 
Sbjct: 138 GAVTPIKDQGLCGSCWAFSAVAAIEGVAQIKKGKLISLSEQELVDCDTNDGGCMGGLMDT 197

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQP 245
           AF+Y I   GLT E  YPY+   G CN+ +    A  I+ ++DVP + E AL  AV+  P
Sbjct: 198 AFNYTITIGGLTSESNYPYKSTNGTCNFNKTKQIATSIKGFEDVPANDEKALMKAVAHHP 257

Query: 246 VSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEG 304
           VS+ I     GF++YS GVF+G C  +L+H VT VGYG S  G  YW++KNSWG  WGE 
Sbjct: 258 VSIGIAGGDIGFQFYSSGVFSGECTTHLDHGVTAVGYGRSKNGLKYWILKNSWGPKWGER 317

Query: 305 GFIRMRRDVGGA-GLCGIARKASYP 328
           G++R+++D+    G CG+A  ASYP
Sbjct: 318 GYMRIKKDIKPKHGQCGLAMNASYP 342


>gi|356564154|ref|XP_003550321.1| PREDICTED: cysteine proteinase RD21a-like [Glycine max]
          Length = 476

 Score =  289 bits (740), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 155/337 (45%), Positives = 206/337 (61%), Gaps = 14/337 (4%)

Query: 1   MLIIMVTWASLVMSRTLH-EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           M II    A    + TL  E+ + + +E W+ +  + Y    EK  RF+IFK N RFI+ 
Sbjct: 33  MSIISYDSAHADKAATLRTEEELMSMYEQWLVKHGKVYNALGEKEKRFQIFKDNLRFIDD 92

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKM-PTRNI-SNQSQSYANNWFGYPDSRRG 117
            N   ++TYKL LN FADLT+EE+ A + G K+ P R +    S  YA      P     
Sbjct: 93  HNSAEDRTYKLGLNRFADLTNEEYRAKYLGTKIDPNRRLGKTPSNRYA------PRVGDK 146

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-- 175
           LP S+DWR  GAV PVK+QG CG CW FSA+ AVEGI KI TG LISLSEQ+++DC    
Sbjct: 147 LPDSVDWRKEGAVPPVKDQGGCGSCWAFSAIGAVEGINKIVTGELISLSEQELVDCDTGY 206

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SE 234
           ++GC GG MD AF +II + G+  +  YPY+  +G C+  R   K   I  Y+DVP   E
Sbjct: 207 NQGCNGGLMDYAFEFIINNGGIDSDEDYPYRGVDGRCDTYRKNAKVVSIDDYEDVPAYDE 266

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIK 294
           LAL+ AV+ QPVSVAI+     F+ Y  GVF G CG  L+H V  VGYG++    YW+++
Sbjct: 267 LALKKAVANQPVSVAIEGGGREFQLYVSGVFTGRCGTALDHGVVAVGYGTAKGHDYWIVR 326

Query: 295 NSWGQNWGEGGFIRMRRDVGG--AGLCGIARKASYPI 329
           NSWG +WGE G+IR+ R++    +G CGIA + SYP+
Sbjct: 327 NSWGSSWGEDGYIRLERNLANSRSGKCGIAIEPSYPL 363


>gi|358343350|ref|XP_003635767.1| Cysteine proteinase [Medicago truncatula]
 gi|355501702|gb|AES82905.1| Cysteine proteinase [Medicago truncatula]
          Length = 338

 Score =  289 bits (740), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 147/339 (43%), Positives = 212/339 (62%), Gaps = 22/339 (6%)

Query: 2   LIIMVTWASLVMSRTLHEDS------ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFR 55
           ++I+  W        +H  +      +  ++E W+ +  R Y+++ E  +RF I++ N +
Sbjct: 9   IVILNLWIIASACPEIHTKNSTNPAVMKKRYETWLKRYGRHYRDREEWEVRFDIYQSNVQ 68

Query: 56  FIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSR 115
           +IE +N + N +YKL  N FAD+T+EEF +++ GY +P   +  + + + +         
Sbjct: 69  YIEFYNSQ-NYSYKLIDNRFADITNEEFKSTYLGY-LPRFRVQTEFRYHKHG-------- 118

Query: 116 RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-- 173
             LP+SIDWR +GAVT VK+QG CG CW FSAVAAVEGI KI+T  L+SLSEQQ++DC  
Sbjct: 119 -ELPKSIDWRKKGAVTHVKDQGRCGSCWAFSAVAAVEGINKIKTENLVSLSEQQLIDCDI 177

Query: 174 -SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT 232
            SG+ GC GG M  AF+YI +  G+   + YPY+ R+G CN  +    A  I  Y+ VP 
Sbjct: 178 KSGNEGCEGGDMYIAFNYIKKHGGIATAKEYPYKGRDGNCNKSKAKNNAVTISGYESVPA 237

Query: 233 -SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYW 291
            +E  L+ AV+ QPVS+A DA    F++YS G+F+G CG NLNH +TIVGYG  N   YW
Sbjct: 238 RNEKMLKAAVAHQPVSIATDAGGYAFQFYSKGIFSGSCGKNLNHGMTIVGYGEENGDKYW 297

Query: 292 LIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPI 329
           ++KNSW  +WGE G++RM+RD     G CGIA  A+YP+
Sbjct: 298 IVKNSWANDWGESGYVRMKRDTKDKDGTCGIAMDATYPV 336


>gi|50355619|dbj|BAD29958.1| cysteine protease [Daucus carota]
          Length = 496

 Score =  289 bits (740), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 149/335 (44%), Positives = 208/335 (62%), Gaps = 14/335 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           M II       V  +T  +D  +   E W+    ++Y    E+  RF+IFK N R+I++ 
Sbjct: 22  MSIITYDETHAVGFKT--DDEATTLFESWLVTHGKSYNALGEEEKRFQIFKNNLRYIDEQ 79

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPT--RNISNQSQSYANNWFGYPDSRRGL 118
           N   ++ +KL LN+FADLT+EE+ + +TG K     + +S +S  YA        S   L
Sbjct: 80  NLVEDRGFKLGLNKFADLTNEEYRSKYTGIKSKDLRKKVSAKSGRYATL------SGESL 133

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS-- 176
           P S+DWR  GAV  VK+QGSCG CW FS ++AVEGI +I TG+LI+LSEQ+++DC  S  
Sbjct: 134 PESVDWRESGAVATVKDQGSCGSCWAFSTISAVEGINQIATGKLITLSEQELVDCDRSYN 193

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SEL 235
            GC GG MD AF +II + G+  +  YPY  R+G C+  R   K   I SY+DVP   EL
Sbjct: 194 EGCNGGLMDYAFEFIINNGGIDTDVDYPYTGRDGKCDQYRKNAKVVTIDSYEDVPAYDEL 253

Query: 236 ALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKN 295
           AL+ A + QP+SVAI+AS   F++Y  G+F G CG  L+H V +VGYG+ N   YW+++N
Sbjct: 254 ALKKAAANQPISVAIEASGRDFQFYDSGIFTGKCGIALDHGVVVVGYGTENGKDYWIVRN 313

Query: 296 SWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
           SWG +WGE G++RM R +    G+CGIA + SYP+
Sbjct: 314 SWGADWGENGYLRMERGISSKTGICGIAIEPSYPV 348


>gi|449522968|ref|XP_004168497.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
          Length = 348

 Score =  289 bits (739), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 201/313 (64%), Gaps = 11/313 (3%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +    E W++   + Y+   EK  RF++FK N + I++ N++   +Y L +NEFADLT
Sbjct: 39  DRLIELFEEWISNHGKIYETIEEKWHRFEVFKDNLKHIDETNKKVT-SYWLGVNEFADLT 97

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
            +EF   + G K+ +       +      F Y D    LP+S+DWR +GAVT VKNQGSC
Sbjct: 98  HQEFKNMYLGLKVESSRTRQSPEE-----FTYKDVVD-LPKSVDWRKKGAVTRVKNQGSC 151

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSYIIRSQGL 197
           G CW FS VAAVEGI KI  G L SLSEQ+++DC    + GC+GG MD AFS+I+ S GL
Sbjct: 152 GSCWAFSTVAAVEGINKIVGGNLTSLSEQELIDCDRPYNNGCHGGLMDYAFSFIVSSGGL 211

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPG 256
             E  YPY   E  C+ ++G ++   I  Y+DVP  +E +L  A++ QP+SVAI+AS   
Sbjct: 212 HKEEDYPYLEVESTCDNKKGELEVVTISGYKDVPENNEASLIKALAHQPLSVAIEASGRD 271

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG- 315
           F++YSGGVF GPCG  L+H VT VGYGSS    Y ++KNSWG  WGE G+IRM+R+ G  
Sbjct: 272 FQFYSGGVFDGPCGTQLDHGVTAVGYGSSKGVDYIIVKNSWGPKWGEKGYIRMKRNTGKP 331

Query: 316 AGLCGIARKASYP 328
           AGLCGI + ASYP
Sbjct: 332 AGLCGINKMASYP 344


>gi|38346007|emb|CAD40110.2| OSJNBa0035O13.9 [Oryza sativa Japonica Group]
 gi|125589429|gb|EAZ29779.1| hypothetical protein OsJ_13837 [Oryza sativa Japonica Group]
          Length = 314

 Score =  289 bits (739), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 153/319 (47%), Positives = 205/319 (64%), Gaps = 15/319 (4%)

Query: 22  ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQ-TYKLSLNEFADLTD 80
           ++ +HE WMA+  R Y + AEKA R ++F+ N  FIE  N   +Q  + L  N+FADLT+
Sbjct: 1   MAQRHERWMAKHGRAYADDAEKARRLEVFRDNVAFIESVNAAASQHKFWLEENQFADLTN 60

Query: 81  EEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG-LPRSIDWRARGAVTPVKNQGSC 139
            EF A+ TG + P+ +  N++ +     F Y +   G LP S+DWR +GAV PVK+QG C
Sbjct: 61  AEFRATRTGLR-PSSSRGNRAPTS----FRYANVSTGDLPASVDWRGKGAVNPVKDQGDC 115

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQG 196
           GCCW FSAVAA+EG  K+ TG+L+SLSEQQ++ C      +GC GG MDDAF +II++ G
Sbjct: 116 GCCWAFSAVAAMEGAVKLATGKLVSLSEQQLVSCDVKGEDQGCEGGLMDDAFDFIIKNGG 175

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSP 255
           L  E  YPY   +  C        AA I+ Y+DVP + E AL  AV+ QPVSVAID    
Sbjct: 176 LAAESDYPYTASDDKCATAGAGAAAATIKGYEDVPANDEAALLKAVANQPVSVAIDGGDR 235

Query: 256 GFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRD 312
            F++Y GGV +G   C   L+HA+T VGYG +++G  YWL+KNSWG +WGE G++RM R 
Sbjct: 236 HFQFYKGGVLSGAAGCATELDHAITAVGYGVASDGTKYWLMKNSWGTSWGEDGYVRMERG 295

Query: 313 VGG-AGLCGIARKASYPIA 330
           V    G+CG+A  ASYP A
Sbjct: 296 VADKEGVCGLAMMASYPTA 314


>gi|37780049|gb|AAP32197.1| cysteine protease 10 [Trifolium repens]
          Length = 272

 Score =  289 bits (739), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 144/274 (52%), Positives = 187/274 (68%), Gaps = 16/274 (5%)

Query: 65  NQTYKLSLNEFADLTDEEFIASHTGYK--MPTRNISNQSQSYANNWFGYPDSRRGLPRSI 122
           N+ YKL +N+FADLT+EEF AS   +K  M +  I   +  Y N           +P ++
Sbjct: 7   NKLYKLGINKFADLTNEEFKASRNKFKGHMCSSIIRTTTFKYEN--------ASAIPSTV 58

Query: 123 DWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGC 179
           DWR +GAVTPVKNQG CG CW FSAVAA EGI ++ TG+L+SLSEQ+++DC      +GC
Sbjct: 59  DWRKKGAVTPVKNQGQCGSCWAFSAVAATEGIHQLSTGKLVSLSEQELIDCDTKGVDQGC 118

Query: 180 YGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALR 238
            GG MDDAF +II++ GL+ E  YPY+  +G CN    ++ A  I  Y+DVP  +ELAL+
Sbjct: 119 EGGLMDDAFKFIIQNHGLSTEVQYPYEGVDGTCNTNEASIHAVTITGYEDVPANNELALQ 178

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSW 297
            AV+ QP+SVAIDAS   F++Y+ GVF G CG  L+H VT VGYG  N+G  YWL+KNSW
Sbjct: 179 KAVANQPISVAIDASGSDFQFYNSGVFTGSCGTELDHGVTAVGYGVGNDGTKYWLVKNSW 238

Query: 298 GQNWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
           G +WGE G+IRM+R +  A GLCGIA +ASYP A
Sbjct: 239 GADWGEEGYIRMQRGIDAAEGLCGIAMQASYPTA 272


>gi|356563584|ref|XP_003550041.1| PREDICTED: cysteine proteinase RD21a-like [Glycine max]
          Length = 366

 Score =  289 bits (739), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 143/336 (42%), Positives = 210/336 (62%), Gaps = 9/336 (2%)

Query: 1   MLIIMVTWASLVMSRTLH---EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFI 57
           +L +  T +  + + T+    ++ +   +E W+ +  + Y    EK  RF++FK N  FI
Sbjct: 12  LLFLSFTLSCAIDTSTITNYTDNEVMTMYEEWLVKHQKVYNGLGEKDKRFQVFKDNLGFI 71

Query: 58  EKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           ++ N   N TYKL LN+FAD+T+EE+   + G K   +    +++S  +  + Y    + 
Sbjct: 72  QEHNNNQNNTYKLGLNKFADMTNEEYRVMYFGTKSDAKRRLMKTKSTGHR-YAYSAGDQ- 129

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS- 176
           LP  +DWR +GAV P+K+QGSCG CW FS VA VE I KI TG+ +SLSEQ+++DC  + 
Sbjct: 130 LPVHVDWRVKGAVAPIKDQGSCGSCWAFSTVATVEAINKIVTGKFVSLSEQELVDCDRAY 189

Query: 177 -RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SE 234
            +GC GG MD AF +II++ G+  ++ YPY+  +G C+  +   KA  I  Y+DVP   E
Sbjct: 190 NQGCNGGLMDYAFEFIIQNGGIDTDKDYPYRGFDGICDPTKKNAKAVNIDGYEDVPPYDE 249

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIK 294
            AL+ AV+RQPVS+AI+AS    + Y  GVF G CG +L+H V +VGYGS N   YWL++
Sbjct: 250 NALKKAVARQPVSIAIEASGRALQLYQSGVFTGECGTSLDHGVVVVGYGSENGVDYWLVR 309

Query: 295 NSWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPI 329
           NSWG  WGE G+ +M+R+V    G CGI  +ASYP+
Sbjct: 310 NSWGTGWGEDGYFKMQRNVRTPTGKCGITMEASYPV 345


>gi|46401612|dbj|BAD16614.1| cysteine proteinase [Dianthus caryophyllus]
          Length = 459

 Score =  289 bits (739), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 147/338 (43%), Positives = 219/338 (64%), Gaps = 14/338 (4%)

Query: 2   LIIMVTWASL---VMSRTLH--EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRF 56
           +I +V+ ++L   ++ R  +  +D I++ +E W+ +  + Y    EK +RF IFK N RF
Sbjct: 14  IIFIVSSSALDLSIIDRAFNRPDDEIASLYETWLVKHGKNYNGLGEKQLRFNIFKDNLRF 73

Query: 57  IEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNW-FGYPDSR 115
           +++ N E N ++KL LN FADLT+EE+ + + G +  +  ++   +S ++ + F   D+ 
Sbjct: 74  VDERNSE-NLSFKLGLNRFADLTNEEYRSVYLGTRPRSVAVARSGRSKSDRYAFRAGDT- 131

Query: 116 RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG 175
             LP S+DWR +GAV  +K+QGSCG CW FSA+AAVEG+ +I TG LISLSEQ++++C  
Sbjct: 132 --LPESVDWRKKGAVAGIKDQGSCGSCWAFSAIAAVEGVNQIVTGDLISLSEQELVECDT 189

Query: 176 S--RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT- 232
           S   GC GG MD AF +II+++G+  +  YPY  R+G C+  R   K   I  Y+D P  
Sbjct: 190 SYNDGCDGGLMDYAFEFIIKNEGIDSDEDYPYTGRDGRCDTNRKNAKVVTIDDYEDSPVY 249

Query: 233 SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWL 292
            E +L+ AV+ QPVSVAI+     F+ Y  GVF G CG  L+H V +VGYG+ +   YW+
Sbjct: 250 DEKSLQKAVANQPVSVAIEGGGRDFQLYDSGVFTGKCGTALDHGVAVVGYGTEDGLDYWI 309

Query: 293 IKNSWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPI 329
           ++NSWG  WGEGG+IRM+R+    +G+CGIA + SYPI
Sbjct: 310 VRNSWGDTWGEGGYIRMQRNTKLPSGICGIAIEPSYPI 347


>gi|355344587|gb|AER60490.1| cysteine proteases [Gossypium hirsutum]
          Length = 371

 Score =  289 bits (739), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 146/321 (45%), Positives = 197/321 (61%), Gaps = 18/321 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           +D +   ++ W+ Q  + Y    E+  RF+IFK N RFI++ N   N TYKL LN+FADL
Sbjct: 38  DDEVMGLYKSWVIQHGKAYNGIGEEEKRFEIFKDNLRFIDEHNSNNNTTYKLGLNKFADL 97

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSR------RGLPRSIDWRARGAVTP 132
           T++E+ A   G +   R    +S+         P SR        LP S+DWR  GAV+P
Sbjct: 98  TNQEYRAKFLGTRTDPRRRLMKSK--------IPSSRYAHRAGDNLPDSVDWRDHGAVSP 149

Query: 133 VKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSY 190
           VK+QGSCG CW FS +A VEGI KI +G L+SLSEQ+++DC  S   GC GG MD AF +
Sbjct: 150 VKDQGSCGSCWAFSTIATVEGINKIVSGELVSLSEQELVDCDRSYDAGCNGGLMDYAFQF 209

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAI 250
           I+ + G+  E+ YPY      C+  +   K   I  Y+DVP +E AL+ AV+ QPVS+AI
Sbjct: 210 IMDNGGIDTEKDYPYLGFNNQCDPTKKNAKVVSIDGYEDVPNNENALKKAVAHQPVSIAI 269

Query: 251 DASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRM 309
           +A    F+ Y  GVF G CG  L+H V  VGYG+ + G  YW+++NSWG NWGE G+IRM
Sbjct: 270 EAGGRAFQLYESGVFNGECGLALDHGVVAVGYGTDDNGQDYWIVRNSWGSNWGENGYIRM 329

Query: 310 RRDV-GGAGLCGIARKASYPI 329
            R++    G CGIA +ASYP+
Sbjct: 330 ERNINANTGKCGIAMEASYPV 350


>gi|302816909|ref|XP_002990132.1| hypothetical protein SELMODRAFT_428615 [Selaginella moellendorffii]
 gi|300142145|gb|EFJ08849.1| hypothetical protein SELMODRAFT_428615 [Selaginella moellendorffii]
          Length = 358

 Score =  288 bits (738), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 154/318 (48%), Positives = 199/318 (62%), Gaps = 17/318 (5%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTD 80
           S  A +E WM    R Y    EK  RF+IF+ N  +IE+ NR+ NQTY L LN FAD+T 
Sbjct: 29  SFRALYEKWMVDHGRVYNGIGEKERRFQIFRDNAEYIEEHNRQVNQTYWLGLNNFADMTH 88

Query: 81  EEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCG 140
           +EF A + G K+P   +SN  +S     F Y D+   LP   DWR++GAV  VKNQG+CG
Sbjct: 89  DEFKALYFGTKVP---LSNTIKS----GFRYEDATN-LPLDTDWRSKGAVATVKNQGACG 140

Query: 141 CCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR--GCYGGWMDDAFSYIIRSQGLT 198
            CW FS VAAVEG+ +I TG L+SLSEQ+++DC   +  GC GG MD AF +II++ GL 
Sbjct: 141 SCWAFSTVAAVEGVNQIVTGELVSLSEQELVDCDKQKNQGCNGGLMDSAFEFIIQNGGLD 200

Query: 199 DERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGF 257
            E  YPY+   G C+  R       I  ++DVP  SE  L  AV+ QPVSVAI+AS   F
Sbjct: 201 SEADYPYKAVSGSCDESRRNSHVVTIDGFEDVPAESEADLLKAVANQPVSVAIEASGRNF 260

Query: 258 RYYSGGVFAGPCGNNLNHAVTIVGYGSSNE-----GPYWLIKNSWGQNWGEGGFIRMRRD 312
           + YSGGV+ G CG  L+H V  VGYG+S         YW+++NSWG  WGE G+IR++R+
Sbjct: 261 QLYSGGVYTGHCGYELDHGVVAVGYGTSKTPDGVATDYWIVRNSWGDAWGESGYIRLQRN 320

Query: 313 VGGA-GLCGIARKASYPI 329
           V  + G CGIA  ASYP+
Sbjct: 321 VASSRGKCGIAMMASYPV 338


>gi|118486542|gb|ABK95110.1| unknown [Populus trichocarpa]
          Length = 465

 Score =  288 bits (738), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 155/337 (45%), Positives = 202/337 (59%), Gaps = 18/337 (5%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           M II         S    +D + A +E W+ +  + Y    EK  RF+IFK N  FI++ 
Sbjct: 26  MSIISYHQTHATKSSWRTDDEVMAMYEEWLVKHGKNYNALGEKEKRFEIFKDNLMFIDQH 85

Query: 61  NREGNQTYKLSLNEFADLTDEEF----IASHTGYKMPTRNISNQSQSYANNWFGYPDSRR 116
           N E N+TY + LN FADLT+EEF    + + TG+K   + +   S  YA      P    
Sbjct: 86  NSE-NRTYTVGLNRFADLTNEEFRSMYLGTRTGHK---KRLPKTSDRYA------PRVGD 135

Query: 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS 176
            LP S+DWR  GAV  VK+QG CG CW FS +AAVEGI KI TG LI+LSEQ+++DC  S
Sbjct: 136 SLPDSVDWRKEGAVAEVKDQGGCGSCWAFSTIAAVEGINKIVTGDLIALSEQELVDCDTS 195

Query: 177 --RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TS 233
              GC GG MD AF +II + G+  E  YPY  R+G C+  R   K   I SY+DVP   
Sbjct: 196 YNEGCNGGLMDYAFEFIINNGGIDTEDDYPYLGRDGRCDTYRKNAKVVSIDSYEDVPEND 255

Query: 234 ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLI 293
           E AL+ AV+ QPVSVAI+     F+ Y+ GVF G CG +L+H V  VGYG+     YW++
Sbjct: 256 ETALKKAVANQPVSVAIEGGGRNFQLYNSGVFTGECGTSLDHGVAAVGYGTEKGKDYWIV 315

Query: 294 KNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
           +NSWG++WGE G+IRM R++    G CGIA + SYPI
Sbjct: 316 RNSWGKSWGESGYIRMERNIASPTGKCGIAIEPSYPI 352


>gi|224136808|ref|XP_002326950.1| predicted protein [Populus trichocarpa]
 gi|222835265|gb|EEE73700.1| predicted protein [Populus trichocarpa]
          Length = 456

 Score =  288 bits (738), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 151/319 (47%), Positives = 198/319 (62%), Gaps = 18/319 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           +D + A +E W+ +  + Y    EK  RF+IFK N  FI++ N E N+TY + LN FADL
Sbjct: 35  DDEVMAMYEEWLVKHGKNYNALGEKEKRFEIFKDNLMFIDQHNSE-NRTYTVGLNRFADL 93

Query: 79  TDEEF----IASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVK 134
           T+EEF    + + TG+K   + +   S  YA      P     LP S+DWR  GAV  VK
Sbjct: 94  TNEEFRSMYLGTRTGHK---KRLPKTSDRYA------PRVGDSLPDSVDWRKEGAVAEVK 144

Query: 135 NQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYII 192
           +QG CG CW FS +AAVEGI KI TG LI+LSEQ+++DC  S   GC GG MD AF +II
Sbjct: 145 DQGGCGSCWAFSTIAAVEGINKIVTGDLIALSEQELVDCDTSYNEGCNGGLMDYAFEFII 204

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAID 251
            + G+  E  YPY  R+G C+  R   K   I SY+DVP   E AL+ AV+ QPVSVAI+
Sbjct: 205 NNGGIDTEDDYPYLGRDGRCDTYRKNAKVVSIDSYEDVPENDETALKKAVANQPVSVAIE 264

Query: 252 ASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRR 311
                F+ Y+ GVF G CG +L+H V  VGYG+     YW+++NSWG++WGE G+IRM R
Sbjct: 265 GGGRNFQLYNSGVFTGECGTSLDHGVAAVGYGTEKGKDYWIVRNSWGKSWGESGYIRMER 324

Query: 312 DVGG-AGLCGIARKASYPI 329
           ++    G CGIA + SYPI
Sbjct: 325 NIASPTGKCGIAIEPSYPI 343


>gi|449455625|ref|XP_004145553.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
          Length = 351

 Score =  288 bits (737), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 201/313 (64%), Gaps = 11/313 (3%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +    E W++   + Y+   EK  RF++FK N + I++ N++   +Y L +NEFADLT
Sbjct: 42  DRLIELFEEWISNHGKIYETIEEKWHRFEVFKDNLKHIDETNKKVT-SYWLGVNEFADLT 100

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
            +EF   + G K+ +       +      F Y D    LP+S+DWR +GAVT VKNQGSC
Sbjct: 101 HQEFKNMYLGLKVESSRTRQSPEE-----FTYKDVVD-LPKSVDWRKKGAVTRVKNQGSC 154

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSYIIRSQGL 197
           G CW FS VAAVEGI KI  G L SLSEQ+++DC    + GC+GG MD AFS+I+ S GL
Sbjct: 155 GSCWAFSTVAAVEGINKIVGGNLTSLSEQELIDCDRPYNNGCHGGLMDYAFSFIVSSGGL 214

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPG 256
             E  YPY   E  C+ ++G ++   I  Y+DVP  +E +L  A++ QP+SVAI+AS   
Sbjct: 215 HKEEDYPYLEVESTCDNKKGELEVVTISGYKDVPENNEASLIKALAHQPLSVAIEASGRD 274

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG- 315
           F++YSGGVF GPCG  L+H VT VGYGSS    Y ++KNSWG  WGE G+IRM+R+ G  
Sbjct: 275 FQFYSGGVFDGPCGTQLDHGVTAVGYGSSKGVDYIIVKNSWGPKWGEKGYIRMKRNTGKP 334

Query: 316 AGLCGIARKASYP 328
           AGLCGI + ASYP
Sbjct: 335 AGLCGINKMASYP 347


>gi|146215988|gb|ABQ10196.1| actinidin Act3a [Actinidia eriantha]
          Length = 380

 Score =  288 bits (737), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 143/315 (45%), Positives = 201/315 (63%), Gaps = 13/315 (4%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D + A +E W+ +  ++Y +  E+ MR +IFK+N RFI++ N + N++Y + LN+FADLT
Sbjct: 36  DEVMALYESWLVKYGKSYNSLGEREMRIEIFKENLRFIDEHNADPNRSYTVGLNQFADLT 95

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
           DEE+ +++ G+K   +  S  S  Y       P     LP  +DWR  GAV  VKNQG C
Sbjct: 96  DEEYRSTYLGFKSSLK--SKVSNRYM------PQVGEVLPDYVDWRTTGAVVDVKNQGLC 147

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---RGCYGGWMDDAFSYIIRSQG 196
             CW F+ +A VE I +I TG LISLSEQ+++DC+ +    GC GG+MDDA+ +II + G
Sbjct: 148 SSCWAFATIATVESINQIITGDLISLSEQELVDCNRTPINEGCKGGFMDDAYEFIINNGG 207

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSP 255
           +  E  YPY  ++  C+  +       I SY+ VP   ELA++ AV+ QPVSVAIDA   
Sbjct: 208 INTEENYPYIGQDDQCDEPKKNQNYVTIDSYEQVPPNDELAMKRAVAYQPVSVAIDAYCL 267

Query: 256 GFRYYSGGVFAG-PCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG 314
           GFR+Y  G+F G  CG  LNHAVTI+GYG+ N   YW++KNS+G  WGE G+ +++R+VG
Sbjct: 268 GFRFYQSGIFTGGSCGTTLNHAVTIIGYGTENGIDYWIVKNSYGTQWGESGYGKVQRNVG 327

Query: 315 GAGLCGIARKASYPI 329
           G G CGIA    YP+
Sbjct: 328 GEGRCGIASYPFYPV 342


>gi|18141281|gb|AAL60578.1|AF454956_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 445

 Score =  288 bits (737), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 145/322 (45%), Positives = 201/322 (62%), Gaps = 11/322 (3%)

Query: 12  VMSRTLHEDSISAK-HELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKL 70
           V ++  H +    K  E W+ ++ + Y    EK  RF+IF  N +F+++ N   NQ+Y+L
Sbjct: 22  VTAKADHRNPEEVKMFERWLVENHKNYNGLGEKDKRFEIFMDNLKFVQEHNSVPNQSYEL 81

Query: 71  SLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAV 130
            L  FADLT+EEF A +   KM     S +S+ Y +N          LP  +DWRA+GAV
Sbjct: 82  GLTRFADLTNEEFRAIYLRSKMERTRDSVKSERYLHN------VGDKLPDEVDWRAKGAV 135

Query: 131 TPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAF 188
            PVK+QGSCG CW FSA+ AVEGI +I+TG L+SLSEQ+++DC  S   GC GG MD AF
Sbjct: 136 VPVKDQGSCGSCWAFSAIGAVEGINQIKTGELVSLSEQELVDCDTSYNNGCGGGLMDYAF 195

Query: 189 SYIIRSQGLTDERVYPYQ-RREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVS 247
            +II + G+  E  YPY    +  CN  +   +   I  Y+DVP +E +L+ A++ QP+S
Sbjct: 196 QFIISNGGIDTEEDYPYTATDDNICNTDKKNTRVVTIDGYEDVPENENSLKKALANQPIS 255

Query: 248 VAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFI 307
           VAI+A   GF+ Y  GVF G CG  L+H V  VGYG+S    YW+I+NSWG NWGE G+I
Sbjct: 256 VAIEAGGRGFQLYKSGVFTGTCGTALDHGVVAVGYGTSEGQDYWIIRNSWGSNWGESGYI 315

Query: 308 RMRRDV-GGAGLCGIARKASYP 328
           +++R++   +G CG+A  ASYP
Sbjct: 316 KLQRNIKDSSGKCGVAMMASYP 337


>gi|146215992|gb|ABQ10198.1| actinidin Act4b [Actinidia eriantha]
          Length = 379

 Score =  288 bits (736), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 149/329 (45%), Positives = 209/329 (63%), Gaps = 14/329 (4%)

Query: 5   MVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREG 64
           ++T+A     RT   D + A  E W+ +  ++Y    EK  RF+IFK N RF+++ N + 
Sbjct: 29  IITYAKKWEQRT--NDEVMAMFESWLVEYGKSYNALGEKERRFEIFKDNLRFVDEHNADV 86

Query: 65  NQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDW 124
           N++YK+ LN+F+DLT EE+ + + G K   R ++N S  Y       P     LP SIDW
Sbjct: 87  NRSYKVGLNQFSDLTLEEYSSIYLGTKFDMR-MTNVSDRYE------PRVGDQLPNSIDW 139

Query: 125 RARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSRGCYG 181
           R +GAV  VKNQG+CG CW F+ +AAVE I +I TG LISLSEQQ++DC   S + GC G
Sbjct: 140 RKKGAVLGVKNQGNCGSCWTFAPIAAVEAINQIVTGNLISLSEQQIVDCQRKSPNNGCKG 199

Query: 182 GWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYA 240
           G    A+ +II + G+  E  YPY+ ++G C+ Q+   K   I  Y++VP  +E AL+ A
Sbjct: 200 GSRAGAYQFIIDNGGINTEANYPYKAQDGECDEQKN-QKYVTIDRYENVPRKNEKALQKA 258

Query: 241 VSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQN 300
           VS Q VSV I ++S  F+ Y  G+F GPCG  ++HAVTIVGYG+     YW+++NSWG N
Sbjct: 259 VSNQLVSVGIASNSSEFKAYKSGIFTGPCGAKIDHAVTIVGYGTEGGMDYWIVRNSWGSN 318

Query: 301 WGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           WGE G++RM+R+VG AG C IA   +YP+
Sbjct: 319 WGENGYVRMQRNVGNAGTCFIATSPNYPV 347


>gi|374713651|gb|AEZ65083.1| cysteine protease [Carica papaya]
          Length = 467

 Score =  287 bits (735), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 154/322 (47%), Positives = 200/322 (62%), Gaps = 20/322 (6%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           +D + A +E W+ +  + Y    EK  RF IFK N RFI++ N + N TY+L LN FADL
Sbjct: 42  DDEVMAMYEAWLVKHGKAYNALGEKEKRFGIFKDNLRFIDEHNSQ-NLTYRLGLNRFADL 100

Query: 79  TDEEFIASHTGYK----MPTRNISNQSQSYANNWFGYPDSRRG--LPRSIDWRARGAVTP 132
           T+EE+ + + G K      TR +S +S  +A        +R G  LP  IDWR  GAV  
Sbjct: 101 TNEEYRSMYLGVKPGATRVTRKVSRKSDRFA--------ARVGDALPDFIDWRKEGAVVG 152

Query: 133 VKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSY 190
           VK+QGSCG CW FS +AAVEGI +I TG LISLSEQ+++DC  S   GC GG MD AF +
Sbjct: 153 VKDQGSCGSCWAFSTIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFEF 212

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVA 249
           II + G+  E  YPY+  +  C+  R       I  Y+DVP   E AL+ AV++QPVSVA
Sbjct: 213 IINNGGIDSEEDYPYRAADQKCDQYRKNANVVSIDGYEDVPENDEAALKKAVAKQPVSVA 272

Query: 250 IDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRM 309
           I+A    F+ Y  GVF G CG +L+H V  VGYG+ N   YW++ NSWG+NWGE G+IRM
Sbjct: 273 IEAGGRAFQLYQSGVFTGKCGTSLDHGVAAVGYGTENGQDYWIVGNSWGKNWGEDGYIRM 332

Query: 310 RRDVGG--AGLCGIARKASYPI 329
            R++ G  +G CGIA   SYPI
Sbjct: 333 ERNLAGSSSGKCGIAIGPSYPI 354


>gi|302816222|ref|XP_002989790.1| hypothetical protein SELMODRAFT_184826 [Selaginella moellendorffii]
 gi|300142356|gb|EFJ09057.1| hypothetical protein SELMODRAFT_184826 [Selaginella moellendorffii]
          Length = 358

 Score =  287 bits (735), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 154/318 (48%), Positives = 198/318 (62%), Gaps = 17/318 (5%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTD 80
           S  A +E WM    R Y    EK  RF+IF+ N  +IE+ NR+ NQTY L LN FAD+T 
Sbjct: 29  SFRALYEKWMVDHGRVYNGIGEKERRFQIFRDNAEYIEEHNRQVNQTYWLGLNNFADMTH 88

Query: 81  EEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCG 140
           +EF A + G K+P   +SN  +S     F Y D+   LP   DWR++GAV  VKNQG+CG
Sbjct: 89  DEFKALYFGTKVP---LSNTIKS----GFRYKDATN-LPLDTDWRSKGAVATVKNQGACG 140

Query: 141 CCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR--GCYGGWMDDAFSYIIRSQGLT 198
            CW FS VAAVEG+ +I TG L+SLSEQ+++DC   +  GC GG MD AF +II++ GL 
Sbjct: 141 SCWAFSTVAAVEGVNQIVTGELVSLSEQELVDCDKQKNQGCNGGLMDSAFEFIIQNGGLD 200

Query: 199 DERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGF 257
            E  YPY+   G C+  R       I  ++DVP  SE  L  AV+ QPVSVAI+AS   F
Sbjct: 201 SEADYPYKAVSGSCDESRRNSHVVTIDGFEDVPAESEADLLKAVANQPVSVAIEASGRNF 260

Query: 258 RYYSGGVFAGPCGNNLNHAVTIVGYGSSNE-----GPYWLIKNSWGQNWGEGGFIRMRRD 312
           + YSGGV+ G CG  L+H V  VGYG+S         YW+++NSWG  WGE G+IR++R+
Sbjct: 261 QLYSGGVYTGHCGYELDHGVVAVGYGTSKTPDGVATDYWIVRNSWGDAWGESGYIRLQRN 320

Query: 313 VGGA-GLCGIARKASYPI 329
           V    G CGIA  ASYP+
Sbjct: 321 VASPRGKCGIAMMASYPV 338


>gi|57282619|emb|CAE54307.1| cysteine proteinase [Gossypium hirsutum]
          Length = 372

 Score =  287 bits (735), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 149/321 (46%), Positives = 198/321 (61%), Gaps = 18/321 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           +D +   ++ W+ Q  + Y    E+  RF+IFK N RFI++ N   N TYKL LN+FADL
Sbjct: 39  DDEVMGLYKSWVIQHGKAYNGIGEEEKRFEIFKDNLRFIDEHNSNNNTTYKLGLNKFADL 98

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSR------RGLPRSIDWRARGAVTP 132
           T++E+ A   G +   R    +S+         P SR        LP S++WR  GAV+ 
Sbjct: 99  TNQEYRAKFLGTRTDPRRRLMKSK--------IPSSRYAHRAGDNLPDSVNWRDHGAVSR 150

Query: 133 VKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSY 190
           VK+QGSCG CW FSA+AAVEGI KI +G LISLSEQ+++DC  S   GC GG MD AF +
Sbjct: 151 VKDQGSCGSCWAFSAIAAVEGINKIVSGELISLSEQELVDCDRSYDAGCNGGLMDYAFQF 210

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAI 250
           II + G+  E+ YPY      C+  +   K   I  Y+DVP +E AL+ AV+ QPVS+AI
Sbjct: 211 IIDNGGIDTEKDYPYLGFNNQCDPTKKNAKVVSIDGYEDVPNNENALKKAVAHQPVSIAI 270

Query: 251 DASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRM 309
           +A    F+ Y  GVF G CG  L+H V  VGYGS + G  YW+++NSWG NWGE G+IRM
Sbjct: 271 EAGGRAFQLYESGVFNGECGLALDHGVVAVGYGSDDNGQDYWIVRNSWGGNWGENGYIRM 330

Query: 310 RRDV-GGAGLCGIARKASYPI 329
            R++    G CGIA +ASYP+
Sbjct: 331 ERNINANTGKCGIAMEASYPV 351


>gi|225428328|ref|XP_002279940.1| PREDICTED: cysteine proteinase-like [Vitis vinifera]
          Length = 707

 Score =  287 bits (735), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 150/313 (47%), Positives = 202/313 (64%), Gaps = 11/313 (3%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D + A+ E W+++  + YK+  EK  RF++F++N   I++ N+E + +Y L LNEFADL+
Sbjct: 398 DKLIARFESWVSKHGKVYKSMEEKLHRFEVFRENLNHIDERNKEVS-SYWLGLNEFADLS 456

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
            EEF + + G +        +S+ Y+   F Y D    LP S+DWR +GAVT VKNQG+C
Sbjct: 457 HEEFKSKYLGLRAEFP----RSRDYSGE-FRYRDVA-DLPESVDWRKKGAVTHVKNQGAC 510

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGL 197
           G CW FS VAAVEGI +I TG L +LSEQ+++DC  +   GC GG MD AF++I  + GL
Sbjct: 511 GSCWAFSTVAAVEGINQIVTGNLTTLSEQELIDCDTTFNSGCNGGLMDYAFAFIASNGGL 570

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPG 256
             E  YPY   EG C  Q+  +    I  Y+DVP   E +L  A++ QP+SVAI+AS   
Sbjct: 571 HKEDDYPYLMEEGTCEEQKEDVDIVTISGYEDVPEKDEESLLKALAHQPLSVAIEASGRD 630

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA 316
           F++YSGGVF GPCG  L+H V  VGYGSS    Y ++KNSWG  WGE G+IRM+R+ G  
Sbjct: 631 FQFYSGGVFNGPCGTELDHGVAAVGYGSSKGLDYIIVKNSWGPKWGEKGYIRMKRNTGKT 690

Query: 317 -GLCGIARKASYP 328
            GLCGI + ASYP
Sbjct: 691 EGLCGINKMASYP 703


>gi|363807062|ref|NP_001242584.1| uncharacterized protein LOC100804015 precursor [Glycine max]
 gi|255640677|gb|ACU20623.1| unknown [Glycine max]
          Length = 366

 Score =  287 bits (735), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 143/336 (42%), Positives = 209/336 (62%), Gaps = 9/336 (2%)

Query: 1   MLIIMVTWASLVMSRTL---HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFI 57
           +L +  T +  + + T+    ++ + A +E W+ +  + Y    +K  RF++FK N  FI
Sbjct: 10  LLFLSFTLSYAIKTSTIINYTDNEVMAMYEEWLVRHQKGYNELGKKDKRFQVFKDNLGFI 69

Query: 58  EKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           ++ N   N TYKL LN+FAD+T+EE+ A + G K   +    +++S  + +     +R  
Sbjct: 70  QEHNNNLNNTYKLGLNKFADMTNEEYRAMYLGTKSNAKRRLMKTKSTGHRYA--FSARDR 127

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS- 176
           LP  +DWR +GAV P+K+QGSCG CW FS VA VE I KI TG+ +SLSEQ+++DC  + 
Sbjct: 128 LPVHVDWRMKGAVAPIKDQGSCGSCWAFSTVATVEAINKIVTGKFVSLSEQELVDCDRAY 187

Query: 177 -RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SE 234
             GC GG MD AF +II++ G+  ++ YPY+  +G C+  +   K   I  Y+DVP   E
Sbjct: 188 NEGCNGGLMDYAFEFIIQNGGIDTDKDYPYRGFDGICDPTKKNAKVVNIDGYEDVPPYDE 247

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIK 294
            AL+ AV+ QPVSVAI+AS    + Y  GVF G CG +L+H V +VGYGS N   YWL++
Sbjct: 248 NALKKAVAHQPVSVAIEASGRALQLYQSGVFTGKCGTSLDHGVVVVGYGSENGVDYWLVR 307

Query: 295 NSWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPI 329
           NSWG  WGE G+ +M+R+V    G CGI  +ASYP+
Sbjct: 308 NSWGTGWGEDGYFKMQRNVRTSTGKCGITMEASYPV 343


>gi|225438807|ref|XP_002283263.1| PREDICTED: germination-specific cysteine protease 1-like isoform 1
           [Vitis vinifera]
          Length = 374

 Score =  287 bits (735), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 152/320 (47%), Positives = 200/320 (62%), Gaps = 16/320 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           E+ +   ++ WMA+  + Y    EK  RF+IFK N +FI++ N + N+TYK+ LN FADL
Sbjct: 39  EEEVMGMYQWWMAKHGKAYNGLGEKEKRFEIFKDNLKFIDEHNAQ-NRTYKVGLNRFADL 97

Query: 79  TDEEFIASHTGYKM-PTR---NISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVK 134
           T+EE+ A + G +  P R    + N S  YA      P     LP S+DWR  GAV PVK
Sbjct: 98  TNEEYRAIYLGTRSDPKRRFAKLKNASPRYAV----MPGEV--LPESVDWRETGAVNPVK 151

Query: 135 NQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSYII 192
           +Q SCG CW FS VAAVEGI +I TG LISLSEQ+++DC      GC GG MD AF +II
Sbjct: 152 DQRSCGSCWAFSTVAAVEGINQIVTGELISLSEQELVDCDTEYDMGCNGGLMDYAFDFII 211

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAID 251
           ++ GL  E+ YPY   +G CN    + K   I  Y+DVP   E AL+ AV+ QPVSVA++
Sbjct: 212 KNGGLDTEKDYPYTGFDGECNLSGKSSKVVSIDGYEDVPPFDEKALQKAVAHQPVSVAVE 271

Query: 252 ASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRR 311
           A     + Y  G+F G CG  L+H +  VGYG+ N   YW+++NSWG +WGE G+IRM R
Sbjct: 272 AGGRALQLYVSGIFTGECGTALDHGIVAVGYGTENGTDYWIVRNSWGSSWGENGYIRMER 331

Query: 312 DVGGA--GLCGIARKASYPI 329
           ++  A  G CGIA +ASYPI
Sbjct: 332 NMADAFSGKCGIAMEASYPI 351


>gi|125547258|gb|EAY93080.1| hypothetical protein OsI_14881 [Oryza sativa Indica Group]
          Length = 314

 Score =  287 bits (735), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 152/319 (47%), Positives = 204/319 (63%), Gaps = 15/319 (4%)

Query: 22  ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQ-TYKLSLNEFADLTD 80
           ++ +HE WMA+  R Y + AEK  R ++F+ N  FIE  N   +Q  + L  N+FADLT+
Sbjct: 1   MAQRHERWMAKHGRAYADDAEKVRRLEVFRDNVAFIESVNAAASQHKFWLEENQFADLTN 60

Query: 81  EEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG-LPRSIDWRARGAVTPVKNQGSC 139
            EF A+ TG + P+ +  N++ +     F Y +   G LP S+DWR +GAV PVK+QG C
Sbjct: 61  AEFRATRTGLR-PSSSRGNRAPTS----FRYANVSTGDLPASVDWRGKGAVNPVKDQGDC 115

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQG 196
           GCCW FSAVAA+EG  K+ TG+L+SLSEQQ++ C      +GC GG MDDAF +II++ G
Sbjct: 116 GCCWAFSAVAAMEGAVKLATGKLVSLSEQQLVSCDVKGEDQGCEGGLMDDAFDFIIKNGG 175

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSP 255
           L  E  YPY   +  C        AA I+ Y+DVP + E AL  AV+ QPVSVAID    
Sbjct: 176 LAAESDYPYTASDDKCATAGAGAAAATIKGYEDVPANDEAALLKAVANQPVSVAIDGGDR 235

Query: 256 GFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRD 312
            F++Y GGV +G   C   L+HA+T VGYG +++G  YWL+KNSWG +WGE G++RM R 
Sbjct: 236 HFQFYKGGVLSGAAGCATELDHAITAVGYGVASDGTKYWLMKNSWGTSWGEDGYVRMERG 295

Query: 313 VGG-AGLCGIARKASYPIA 330
           V    G+CG+A  ASYP A
Sbjct: 296 VADKEGVCGLAMMASYPTA 314


>gi|2463584|dbj|BAA22544.1| FBSB precursor [Ananas comosus]
          Length = 356

 Score =  287 bits (734), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 154/333 (46%), Positives = 200/333 (60%), Gaps = 13/333 (3%)

Query: 1   MLIIMVTWASL-VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
            L + V WAS    S     D +  + E WM +  R YK+  EK  RF+IFK N   IE 
Sbjct: 11  FLFLCVMWASPSAASADEPSDPMMKRFEEWMVEYGRVYKDNDEKMRRFQIFKNNVNHIET 70

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSR-RGL 118
           FN     +Y L +N+F D+T+ EFIA +TG      NI  +          + D     +
Sbjct: 71  FNSRNENSYTLGINQFTDMTNNEFIAQYTGGISRPLNIEREPV------VSFDDVDISAV 124

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRG 178
           P+SIDWR  GAVT VKNQ  CG CW F+A+A VE I KI+ G L  LSEQQVLDC+   G
Sbjct: 125 PQSIDWRDYGAVTSVKNQNPCGACWAFAAIATVESIYKIKKGILEPLSEQQVLDCAKGYG 184

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELAL 237
           C GGW   AF +II ++G+    +YPY+  +G C    G   +A I  Y  VP  +E ++
Sbjct: 185 CKGGWEFRAFEFIISNKGVASGAIYPYKAAKGTCK-TNGVPNSAYITGYARVPRNNESSM 243

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYG-SSNEGPYWLIKNS 296
            YAVS+QP++VA+DA++  F+YY  GVF GPCG +LNHAVT +GYG  SN   YW++KNS
Sbjct: 244 MYAVSKQPITVAVDANA-NFQYYKSGVFNGPCGTSLNHAVTAIGYGQDSNGKKYWIVKNS 302

Query: 297 WGQNWGEGGFIRMRRDV-GGAGLCGIARKASYP 328
           WG  WGE G+IRM RDV   +G+CGIA  + YP
Sbjct: 303 WGARWGEAGYIRMARDVSSSSGICGIAIDSLYP 335


>gi|18423124|ref|NP_568722.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|75309064|sp|Q9FGR9.1|CEP1_ARATH RecName: Full=KDEL-tailed cysteine endopeptidase CEP1; AltName:
           Full=Cysteine proteinase CP56; Short=AtCP56; Flags:
           Precursor
 gi|9759028|dbj|BAB09397.1| cysteine endopeptidase [Arabidopsis thaliana]
 gi|20258850|gb|AAM13907.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|308097832|gb|ADO14465.1| papain [Arabidopsis thaliana]
 gi|332008536|gb|AED95919.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 361

 Score =  287 bits (734), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 153/339 (45%), Positives = 211/339 (62%), Gaps = 17/339 (5%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELW-MAQSARTYKNQA----EKAMRFKIFKKNFR 55
           ML+++ T   L      H   + +++ LW + +  R++   A    EKA RF +FK N +
Sbjct: 11  MLMVLETTKGL----DFHNKDVESENSLWELYERWRSHHTVARSLEEKAKRFNVFKHNVK 66

Query: 56  FIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSR 115
            I + N++ +++YKL LN+F D+T EEF  ++ G  +    +  Q +  A   F Y +  
Sbjct: 67  HIHETNKK-DKSYKLKLNKFGDMTSEEFRRTYAGSNIKHHRMF-QGEKKATKSFMYANVN 124

Query: 116 RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-- 173
             LP S+DWR  GAVTPVKNQG CG CW FS V AVEGI +IRT +L SLSEQ+++DC  
Sbjct: 125 T-LPTSVDWRKNGAVTPVKNQGQCGSCWAFSTVVAVEGINQIRTKKLTSLSEQELVDCDT 183

Query: 174 SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-T 232
           + ++GC GG MD AF +I    GLT E VYPY+  +  C+  +       I  ++DVP  
Sbjct: 184 NQNQGCNGGLMDLAFEFIKEKGGLTSELVYPYKASDETCDTNKENAPVVSIDGHEDVPKN 243

Query: 233 SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYW 291
           SE  L  AV+ QPVSVAIDA    F++YS GVF G CG  LNH V +VGYG++ +G  YW
Sbjct: 244 SEDDLMKAVANQPVSVAIDAGGSDFQFYSEGVFTGRCGTELNHGVAVVGYGTTIDGTKYW 303

Query: 292 LIKNSWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPI 329
           ++KNSWG+ WGE G+IRM+R +    GLCGIA +ASYP+
Sbjct: 304 IVKNSWGEEWGEKGYIRMQRGIRHKEGLCGIAMEASYPL 342


>gi|171702829|dbj|BAG16370.1| cysteine protease [Brassica oleracea var. italica]
          Length = 332

 Score =  287 bits (734), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 143/316 (45%), Positives = 205/316 (64%), Gaps = 8/316 (2%)

Query: 15  RTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNR-EGNQTYKLSLN 73
           R L E ++  +H  WM +  R Y +  EK  R+ +FK+N   IE+ N  +   T+KL++N
Sbjct: 20  RPLDEVTMQKRHAAWMTEHGRVYADANEKNNRYVVFKRNVESIERLNEVQYGLTFKLAVN 79

Query: 74  EFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPV 133
           +FADLT+EEF + +TGYK    N    S++   ++     S   LP S+DWR +GAVTP+
Sbjct: 80  QFADLTNEEFRSMYTGYK---GNSVLSSRTKPTSFRYQHVSSDALPISVDWRKKGAVTPI 136

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYII 192
           K+QGSCG CW FSAVAA+EG+ +I+ G+LISLSEQ+++DC +   GC GG+M+ AF+Y +
Sbjct: 137 KDQGSCGSCWAFSAVAAIEGVAQIKKGKLISLSEQELVDCDTNDDGCMGGYMNSAFNYTM 196

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAID 251
            + GLT E  YPY+  +G CN  +    A  I+ ++DVP + E AL  AV+  PVS+ I 
Sbjct: 197 TTGGLTSESNYPYKSTDGTCNINKTKQIATSIKGFEDVPANDEKALMKAVAHHPVSIGIA 256

Query: 252 ASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYG-SSNEGPYWLIKNSWGQNWGEGGFIRMR 310
               GF++YS GVF+G C  +L+H V +VGYG SSN   YW++KNSWG  WGE G++R++
Sbjct: 257 GGGTGFQFYSSGVFSGECSTHLDHGVAVVGYGKSSNGSKYWILKNSWGPKWGERGYMRIK 316

Query: 311 RDVGGA-GLCGIARKA 325
           +D     G CG+A  A
Sbjct: 317 KDTKAKHGQCGLAMNA 332


>gi|224065647|ref|XP_002301901.1| predicted protein [Populus trichocarpa]
 gi|222843627|gb|EEE81174.1| predicted protein [Populus trichocarpa]
          Length = 336

 Score =  287 bits (734), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 154/313 (49%), Positives = 198/313 (63%), Gaps = 11/313 (3%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D I    E W+++  + Y++  EK +RF+IFK N   I++ N++    Y L LNEF+DL+
Sbjct: 27  DKIIDLFESWISKHGKIYESIEEKWLRFEIFKDNLFHIDETNKK-VVNYWLGLNEFSDLS 85

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
            EEF   + G K+        SQ      F Y D    +P+S+DWR +GAVT VKNQGSC
Sbjct: 86  HEEFKNKYLGLKVDMSERRECSQE-----FNYKDVMS-IPKSVDWRKKGAVTDVKNQGSC 139

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR--GCYGGWMDDAFSYIIRSQGL 197
           G CW FS VAAVEGI +I TG L SLSEQ+++DC  +   GC GG MD AFSYII + GL
Sbjct: 140 GSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCDTTNNYGCNGGLMDYAFSYIISNGGL 199

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPG 256
             E  YPY   EG C  ++   +   I  Y DVP  SE +L  A++ QP+SVAI+AS   
Sbjct: 200 HKEVDYPYIMEEGTCEMRKEESEVVTISGYHDVPQNSEESLLKALANQPLSVAIEASGRD 259

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG- 315
           F++YSGGVF G CG  L+H V  VGYGS+N   Y ++KNSWG  WGE G+IRM+R+ G  
Sbjct: 260 FQFYSGGVFDGHCGTQLDHGVAAVGYGSTNGLDYIIVKNSWGSKWGEKGYIRMKRNTGKP 319

Query: 316 AGLCGIARKASYP 328
           AGLCGI + ASYP
Sbjct: 320 AGLCGINKMASYP 332


>gi|356533293|ref|XP_003535200.1| PREDICTED: LOW QUALITY PROTEIN: cysteine proteinase RD21a-like
           [Glycine max]
          Length = 466

 Score =  287 bits (734), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 153/329 (46%), Positives = 201/329 (61%), Gaps = 10/329 (3%)

Query: 8   WASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQT 67
           WA  +      E      +E W+ +  + Y    EK  RFKIFK N RFIE+ N  G+++
Sbjct: 30  WAMDMSIIDYDESHTRHVYEAWLVKHGKAYNALGEKERRFKIFKDNLRFIEEHNGAGDKS 89

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG--LPRSIDWR 125
           YKL LN+FADLT+EE+ A   G +  TR   N++   A     Y   R G  LP  +DWR
Sbjct: 90  YKLGLNKFADLTNEEYRAMFLGTR--TRGPKNKAAVVAKKTDRYA-YRAGEELPAMVDWR 146

Query: 126 ARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGW 183
            +GAVTP+K+QG CG CW FS V AVEGI +I TG L SLSEQ+++DC    + GC GG 
Sbjct: 147 EKGAVTPIKDQGQCGSCWAFSTVGAVEGINQIVTGNLTSLSEQELVDCDRGYNMGCNGGL 206

Query: 184 MDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVS 242
           MD AF +I+++ G+  E  YPY  ++  C+  R   +   I  Y+DVPT+ E +L  AV+
Sbjct: 207 MDYAFEFIVQNGGIDTEEDYPYHAKDNTCDPNRKNARVVTIDGYEDVPTNDEKSLMKAVA 266

Query: 243 RQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
            QPVSVAI+A    F+ Y  GVF G CG NL+H V  VGYG+ N   YWL++NSWG  WG
Sbjct: 267 NQPVSVAIEAGGMEFQLYQSGVFTGRCGTNLDHGVVAVGYGTENGTDYWLVRNSWGSAWG 326

Query: 303 EGGFIRMRRDVGG--AGLCGIARKASYPI 329
           E G+I++ R+V     G CGIA +ASYPI
Sbjct: 327 ENGYIKLERNVQNTETGKCGIAIEASYPI 355


>gi|357467173|ref|XP_003603871.1| Cysteine proteinase [Medicago truncatula]
 gi|355492919|gb|AES74122.1| Cysteine proteinase [Medicago truncatula]
 gi|388499154|gb|AFK37643.1| unknown [Medicago truncatula]
          Length = 350

 Score =  287 bits (734), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 146/313 (46%), Positives = 201/313 (64%), Gaps = 11/313 (3%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +    E WM++  + Y+   EK +RF++FK N + I+  N+  +  Y L LNEFADL+
Sbjct: 41  DKLIELFESWMSRHGKIYETIEEKLLRFEVFKDNLKHIDDRNKVVS-NYWLGLNEFADLS 99

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
            +EF   + G K+      +Q +  +   F Y D    LP+S+DWR +GAVTPVKNQG C
Sbjct: 100 HQEFKNKYLGLKVDL----SQRRESSEEEFTYRDVD--LPKSVDWRKKGAVTPVKNQGQC 153

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGL 197
           G CW FS VAAVEGI +I TG L SLSEQ+++DC  +   GC GG MD AFS+I+++ GL
Sbjct: 154 GSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDTTYNNGCNGGLMDYAFSFIVKNGGL 213

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPG 256
             E  YPY   E  C  ++   +   I  Y DVP  +E +L  A++ QP+SVAI+AS   
Sbjct: 214 HKEEDYPYIMEESTCEMKKEVSEVVTINGYHDVPQNNEQSLLKALANQPLSVAIEASGRD 273

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA 316
           F++YSGGVF G CG+ L+H V+ VGYG+S    Y ++KNSWG  WGE GFIRM+R++G +
Sbjct: 274 FQFYSGGVFDGHCGSELDHGVSAVGYGTSKGLDYIIVKNSWGAKWGEKGFIRMKRNIGKS 333

Query: 317 -GLCGIARKASYP 328
            G+CG+ + ASYP
Sbjct: 334 EGICGLYKMASYP 346


>gi|222629922|gb|EEE62054.1| hypothetical protein OsJ_16838 [Oryza sativa Japonica Group]
          Length = 336

 Score =  286 bits (733), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 155/300 (51%), Positives = 196/300 (65%), Gaps = 11/300 (3%)

Query: 35  RTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMP- 93
           + Y +  EK  RF++FK N   I+  N++   +Y L LNEFADLT +EF A++ G   P 
Sbjct: 38  KAYASFEEKVRRFEVFKDNLNHIDDINKK-VTSYWLGLNEFADLTHDEFKATYLGLTPPP 96

Query: 94  TRNISNQSQSYANNWFGYPDSRRG-LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVE 152
           TR+    S+ Y++  F Y     G +P+ +DWR + AVT VKNQG CG CW FS VAAVE
Sbjct: 97  TRS---NSKHYSSEEFRYGKMSNGEVPKEMDWRKKNAVTEVKNQGQCGSCWAFSTVAAVE 153

Query: 153 GITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREG 210
           GI  I TG L SLSEQ+++DCS  G+ GC GG MD AFSYI  + GL  E  YPY   EG
Sbjct: 154 GINAIVTGNLTSLSEQELIDCSTDGNNGCNGGLMDYAFSYIASTGGLRTEEAYPYAMEEG 213

Query: 211 YCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPC 269
            C+  +GA     I  Y+DVP + E AL  A++ QPVSVAI+AS   F++YSGGVF GPC
Sbjct: 214 DCDEGKGAA-VVTISGYEDVPANDEQALVKALAHQPVSVAIEASGRHFQFYSGGVFDGPC 272

Query: 270 GNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYP 328
           G  L+H VT VGYG+S    Y ++KNSWG +WGE G+IRM+R  G G GLCGI + ASYP
Sbjct: 273 GEQLDHGVTAVGYGTSKGQDYIIVKNSWGPHWGEKGYIRMKRGTGKGEGLCGINKMASYP 332


>gi|356559055|ref|XP_003547817.1| PREDICTED: cysteine proteinase RD21a [Glycine max]
          Length = 366

 Score =  286 bits (733), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 145/344 (42%), Positives = 208/344 (60%), Gaps = 18/344 (5%)

Query: 2   LIIMVTWASLVMSRTLH------------EDSISAKHELWMAQSARTYKNQAEKAMRFKI 49
           +I +VT   L +S TL             ++ +   +E W+ +  + Y    EK  RF++
Sbjct: 4   IITLVTSTLLFLSFTLSCAIDTSTITNYTDNEVMTMYEEWLVKHQKVYNGLREKDKRFQV 63

Query: 50  FKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWF 109
           FK N  FI++ N   N TYKL LN+FAD+T+EE+   + G K   +    +++S  +  +
Sbjct: 64  FKDNLGFIQEHNNNQNNTYKLGLNQFADMTNEEYRVMYFGTKSDAKRRLMKTKSTGHR-Y 122

Query: 110 GYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQ 169
            Y    R LP  +DWR +GAV P+K+QGSCG CW FS VA VE I KI TG+ +SLSEQ+
Sbjct: 123 AYSAGDR-LPVHVDWRVKGAVAPIKDQGSCGSCWAFSTVATVEAINKIVTGKFVSLSEQE 181

Query: 170 VLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSY 227
           ++DC  +   GC GG MD AF +II++ G+  ++ YPY+  +G C+  +   K   I  +
Sbjct: 182 LVDCDRAYNEGCNGGLMDYAFEFIIQNGGIDTDKDYPYRGFDGICDPTKKNAKVVNIDGF 241

Query: 228 QDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSN 286
           +DVP   E AL+ AV+ QPVS+AI+AS    + Y  GVF G CG +L+H V +VGYGS N
Sbjct: 242 EDVPPYDENALKKAVAHQPVSIAIEASGRDLQLYQSGVFTGKCGTSLDHGVVVVGYGSEN 301

Query: 287 EGPYWLIKNSWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPI 329
              YWL++NSWG  WGE G+ +M+R+V    G CGI  +ASYP+
Sbjct: 302 GVDYWLVRNSWGTGWGEDGYFKMQRNVRTPTGKCGITMEASYPV 345


>gi|5777889|emb|CAB53515.1| cysteine protease [Solanum tuberosum]
          Length = 466

 Score =  286 bits (733), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 144/318 (45%), Positives = 202/318 (63%), Gaps = 13/318 (4%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           +D +SA +E W+ +  ++Y    EK  RF+IFK N ++I++ N   NQ+YKL L +FADL
Sbjct: 42  DDEVSALYESWLIEHGKSYNALGEKDKRFQIFKDNLKYIDEQNSVPNQSYKLGLTKFADL 101

Query: 79  TDEEFIASHTGYKM--PTRNIS-NQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
           T+EE+ + + G K     R +S N+S  Y       P     LP S+DWR +G +  VK+
Sbjct: 102 TNEEYRSIYLGTKSSGDRRKLSKNKSDRY------LPKVGDSLPESVDWRDKGVLVGVKD 155

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIR 193
           QGSCG CW FSAVAA+E I  I TG LISLSEQ+++DC  S   GC GG MD AF ++I 
Sbjct: 156 QGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDKSYNEGCDGGLMDYAFEFVIN 215

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDA 252
           + G+  E  YPY+ R   C+  R   K  +I SY+DVP + E AL+ AV+ QPVS+AI+A
Sbjct: 216 NGGIDTEEDYPYKERNDVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAHQPVSIAIEA 275

Query: 253 SSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRD 312
                ++Y  G+F G CG  ++H V   GYGS N   YW+++NSWG  WGE G++R++R+
Sbjct: 276 GGRDLQHYKSGIFTGKCGTAVDHGVVAAGYGSENGMDYWIVRNSWGAKWGEKGYLRVQRN 335

Query: 313 VG-GAGLCGIARKASYPI 329
           V   +GLCG+A + SYP+
Sbjct: 336 VASSSGLCGLATEPSYPV 353


>gi|414879123|tpg|DAA56254.1| TPA: hypothetical protein ZEAMMB73_708930 [Zea mays]
          Length = 368

 Score =  286 bits (732), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 150/309 (48%), Positives = 193/309 (62%), Gaps = 9/309 (2%)

Query: 26  HELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIA 85
           +E W     R +++  EK  RF  FK+N RFI   N+ G++ Y+L LN F D+  EEF  
Sbjct: 42  YERWQTHH-RVHRHHGEKGRRFGTFKENARFIHAHNKRGDRPYRLRLNRFGDMGREEF-- 98

Query: 86  SHTGYKMPTRNISNQSQSYANNWFGYP-DSRRGLPRSIDWRARGAVTPVKNQGSCGCCWI 144
             +G+     N   +  + A    G+  D    LPRS+DWR +GAVT VKNQG CG CW 
Sbjct: 99  -RSGFADSRINDLRREPTAAPAVPGFMYDDATDLPRSVDWRQKGAVTAVKNQGRCGSCWA 157

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYIIRSQGLTDERVY 203
           FS V AVEGI  IRTG L+SLSEQ+++DC +   GC GG M++AF +I    G+T E  Y
Sbjct: 158 FSTVVAVEGINAIRTGSLVSLSEQELIDCDTDENGCQGGLMENAFEFIKSHGGITTESAY 217

Query: 204 PYQRREGYCNWQRGAM-KAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYS 261
           PY    G C+  R    +   I  +Q VP  SE AL  AV+ QPVSVAIDA     ++YS
Sbjct: 218 PYHASNGTCDGARARRGRVVAIDGHQAVPAGSEDALAKAVAHQPVSVAIDAGGQALQFYS 277

Query: 262 GGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCG 320
            GVF G CG +L+H V  VGYG S++G PYW++KNSWG +WGEGG+IRM+R  G  GLCG
Sbjct: 278 EGVFTGDCGTDLDHGVAAVGYGVSDDGTPYWIVKNSWGPSWGEGGYIRMQRGTGNGGLCG 337

Query: 321 IARKASYPI 329
           IA +AS+PI
Sbjct: 338 IAMEASFPI 346


>gi|124484387|dbj|BAF46304.1| cysteine proteinase precursor [Ipomoea nil]
          Length = 474

 Score =  286 bits (732), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 151/335 (45%), Positives = 212/335 (63%), Gaps = 13/335 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           M II              ED +    E W+ +  ++Y    EK  RFKIF+ N ++I++ 
Sbjct: 25  MSIITYDQQHPAKGLVRSEDEVKEMFESWLVKHGKSYNAVDEKDKRFKIFRDNLKYIDEK 84

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKM-PTRN-ISNQSQSYANNWFGYPDSRRGL 118
           N   N++YKL LN FAD+T+EE+   + G K   +RN + ++S  YA      P +   L
Sbjct: 85  NSLENRSYKLGLNRFADITNEEYRTGYLGAKRDASRNMVKSKSDRYA------PVAGDSL 138

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--S 176
           P SIDWR +GAVT VK+QGSCG CW FS +AAVEG+ ++ TG LISLSEQ+++DC    +
Sbjct: 139 PDSIDWREKGAVTGVKDQGSCGSCWAFSTIAAVEGVNQLATGNLISLSEQELVDCDRKIN 198

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCN-WQRGAMKAARIRSYQDVPTS-E 234
           +GC GG M  AF +II++ G+  E  YPY  ++G C+ +++   K A I  Y++VP + E
Sbjct: 199 QGCNGGDMGYAFQFIIKNGGIDSEEDYPYTGKDGKCDSYRQNNAKVASIDGYEEVPVNNE 258

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIK 294
            +L+ AV+ QPVSVAI+A    F+ YS G+F G CG +L+H V  VGYG+ N   YW++K
Sbjct: 259 KSLQKAVANQPVSVAIEAGGYDFQLYSSGIFTGSCGTDLDHGVAAVGYGTENGVDYWIVK 318

Query: 295 NSWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYP 328
           NSWG  WGE G++RM+R+V    GLCGIA +ASYP
Sbjct: 319 NSWGDYWGEKGYVRMQRNVKAKTGLCGIAMEASYP 353


>gi|50355617|dbj|BAD29957.1| cysteine protease [Daucus carota]
          Length = 437

 Score =  286 bits (732), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 141/315 (44%), Positives = 201/315 (63%), Gaps = 7/315 (2%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           +D +   +  W+ +  ++Y    EK  RF+IFK N R+I+  N + +++Y+L LN FADL
Sbjct: 42  DDEVMTMYNSWLVKHGKSYNALGEKETRFQIFKDNLRYIDNHNADPDRSYELGLNRFADL 101

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
           T+EE+ A + G K  +R    +     ++ +  P     LP SIDWR +GAV  VK+QGS
Sbjct: 102 TNEEYRAKYLGTK--SRESRPKLSKGPSDRYA-PVEGEELPDSIDWREKGAVAAVKDQGS 158

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQG 196
           CG CW FSA+ AVEGI +I TG LI+LSEQ+++DC  S   GC GG MD AF++II++ G
Sbjct: 159 CGSCWAFSAIGAVEGINQITTGELITLSEQELVDCDRSYNEGCEGGLMDYAFNFIIKNGG 218

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSP 255
           +  +  YPY  R+G CN  +   K   I SY+DVP   E AL+ A + QP+SVAI+A   
Sbjct: 219 IDSDLDYPYTGRDGTCNQNKENAKVVTIDSYEDVPVYDEKALQKAAANQPISVAIEAGGM 278

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG- 314
            F+ Y  G+F G CG  ++H V +VGYGS     YW+++NSWG  WGE G+++M+R+VG 
Sbjct: 279 DFQLYVSGIFTGKCGTAVDHGVVVVGYGSEEGMDYWIVRNSWGAAWGEAGYLKMQRNVGK 338

Query: 315 GAGLCGIARKASYPI 329
            +GLCGI  + SYP+
Sbjct: 339 SSGLCGITIEPSYPV 353


>gi|224096714|ref|XP_002310708.1| predicted protein [Populus trichocarpa]
 gi|222853611|gb|EEE91158.1| predicted protein [Populus trichocarpa]
          Length = 356

 Score =  286 bits (731), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 149/320 (46%), Positives = 205/320 (64%), Gaps = 16/320 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           +D + + ++ W+ +  + Y    EKA RF+IFK N RFI++ N + N+TYK+ L +FADL
Sbjct: 21  DDEVMSIYKWWLQKHGKAYNRLGEKAKRFEIFKNNLRFIDEHNSQ-NRTYKVGLTKFADL 79

Query: 79  TDEEFIASHTGYKM-PTRNI---SNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVK 134
           T++E+ A   G +  P R +    N S+ YA     Y    + LP S+DWR +GAV P+K
Sbjct: 80  TNQEYRAMFLGTRSDPKRRLMKSKNPSERYA-----YKAGDK-LPESVDWRGKGAVNPIK 133

Query: 135 NQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSYII 192
           +QGSCG CW FS VAAVEGI +I TG LISLSEQ+++DC    + GC GG MD AF +II
Sbjct: 134 DQGSCGSCWAFSTVAAVEGINQIVTGELISLSEQELVDCDRFYNAGCNGGLMDYAFQFII 193

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAID 251
            + GL  E+ YPY   +  C+  +   KA  I  ++DV P  E AL+ AV+ QPVSVAI+
Sbjct: 194 NNGGLDTEKDYPYLGNDDTCDRDKMKTKAVSIDGFEDVLPFDEKALQKAVAHQPVSVAIE 253

Query: 252 ASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRR 311
           AS    ++Y  GVF G CG  L+H V +VGYG+     YWL++NSWG  WGE G+I+M+R
Sbjct: 254 ASGMALQFYQSGVFTGECGTALDHGVVVVGYGTEKGLDYWLVRNSWGTEWGEHGYIKMQR 313

Query: 312 DVGG--AGLCGIARKASYPI 329
           +V     G CGIA ++SYP+
Sbjct: 314 NVRDTYTGRCGIAMESSYPV 333


>gi|157093728|gb|ABV22590.1| KDEL-tailed cysteine endopeptidase [Solanum lycopersicum]
          Length = 360

 Score =  286 bits (731), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 150/342 (43%), Positives = 214/342 (62%), Gaps = 16/342 (4%)

Query: 1   MLIIMVTWASLV---MSRTLHEDSISAKHELW-MAQSARTY----KNQAEKAMRFKIFKK 52
           + +++ T A ++    S   HE  +  + + W + +  R++    ++  EK  RF +FK 
Sbjct: 4   LFLVLFTLALVLRLGESFDFHEKELETEEKFWELYERWRSHHTVSRSLDEKHKRFNVFKA 63

Query: 53  NFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYP 112
           N  ++  FN++ ++ YKL LN+FAD+T+ EF   + G K+   + +    S AN  F Y 
Sbjct: 64  NVHYVHNFNKK-DKPYKLKLNKFADMTNHEFRQHYAGSKI-KHHRTLLGASRANGTFMYA 121

Query: 113 DSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLD 172
           +    +P SIDWR +GAVTPVK+QG CG CW FS V AVEGI +I+T +L+SLSEQ+++D
Sbjct: 122 N-EDNVPPSIDWRKKGAVTPVKDQGQCGSCWAFSTVVAVEGINQIKTKKLVSLSEQELVD 180

Query: 173 CSGS--RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV 230
           C  +  +GC GG MD AF +I +  G+T E  YPY+  +  C+ Q+       I  ++DV
Sbjct: 181 CDTTENQGCNGGLMDPAFDFIKKRGGITTEERYPYKAEDDKCDIQKRNTPVVSIDGHEDV 240

Query: 231 -PTSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG- 288
            P  E AL  AV+ QP+SVAIDAS   F++YS GVF G CG  L+H V IVGYG++ +G 
Sbjct: 241 PPNDEDALLKAVANQPISVAIDASGSQFQFYSEGVFTGECGTELDHGVAIVGYGTTVDGT 300

Query: 289 PYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
            YW++KNSWG  WGE G+IRM+R V    GLCGIA + SYPI
Sbjct: 301 KYWIVKNSWGAGWGEKGYIRMQRKVDAEEGLCGIAMQPSYPI 342


>gi|255547982|ref|XP_002515048.1| cysteine protease, putative [Ricinus communis]
 gi|223546099|gb|EEF47602.1| cysteine protease, putative [Ricinus communis]
          Length = 359

 Score =  286 bits (731), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 150/320 (46%), Positives = 212/320 (66%), Gaps = 13/320 (4%)

Query: 19  EDSISAKHELW-MAQSARTY----KNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLN 73
           E+ ++++  LW + +  R++    ++  EK  RF +FK+N + I K N++ ++ YKL LN
Sbjct: 27  EEDLASEESLWNLYERWRSHHTVSRSLTEKNQRFNVFKENLKHIHKVNQK-DRPYKLRLN 85

Query: 74  EFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPV 133
           +FAD+T+ EF+  + G K+    + + S+      F + ++   LP SIDWR +GAVT V
Sbjct: 86  KFADMTNHEFLQHYGGSKVSHYRMFHGSRRQTG--FAHENTSN-LPSSIDWRKQGAVTGV 142

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYII 192
           K+QG CG CW FS+VAAVEGI KI+TG LISLSEQ+++DC S + GC GG M+ AFS+I 
Sbjct: 143 KDQGKCGSCWAFSSVAAVEGINKIKTGELISLSEQELVDCNSVNHGCDGGLMEQAFSFIE 202

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAID 251
           ++ GLT E  YPY+ ++GYC+  +       I  Y+ VP   E AL  AV+ QPVS+AID
Sbjct: 203 KTGGLTTENNYPYRAKDGYCDSAKMNTPMVTIDGYEMVPENDEHALMQAVANQPVSIAID 262

Query: 252 ASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMR 310
           A    F++YS GV+ G CG  LNH V +VGYG++ +G  YW++KNSWG  WGE GFIRM+
Sbjct: 263 AGGQDFQFYSEGVYTGDCGTELNHGVALVGYGATQDGTKYWIVKNSWGSEWGENGFIRMQ 322

Query: 311 RDVG-GAGLCGIARKASYPI 329
           R+     GLCGI  +ASYPI
Sbjct: 323 RENDVEEGLCGITLEASYPI 342


>gi|297791625|ref|XP_002863697.1| hypothetical protein ARALYDRAFT_917391 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309532|gb|EFH39956.1| hypothetical protein ARALYDRAFT_917391 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 463

 Score =  285 bits (730), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 155/330 (46%), Positives = 207/330 (62%), Gaps = 22/330 (6%)

Query: 10  SLVMSRTLHEDSISAKHELWMAQSARTYKNQ----AEKAMRFKIFKKNFRFIEKFNREGN 65
           S V SR+  E  +   +E WM +  +   NQ    AEK  RF+IFK N R+I++ N + N
Sbjct: 36  STVSSRSDAE--VERIYEAWMVEHGKKKMNQNGLGAEKDQRFEIFKDNLRYIDEHNTK-N 92

Query: 66  QTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG--LPRSID 123
            +YKL L  FADLT++E+ + + G K P + +   S  Y        ++R G  LP S+D
Sbjct: 93  LSYKLGLTRFADLTNDEYRSMYLGAK-PVKRVLKTSDRY--------EARVGDALPDSVD 143

Query: 124 WRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYG 181
           WR  GAV  VK+QGSCG CW FS + AVEGI KI TG LISLSEQ+++DC  S  +GC G
Sbjct: 144 WRKEGAVADVKDQGSCGSCWAFSTIGAVEGINKIVTGDLISLSEQELVDCDTSYNQGCNG 203

Query: 182 GWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYA 240
           G MD AF +II++ G+  E  YPY+  +G C+  R   K   I SY+DVP  SE +L+ A
Sbjct: 204 GLMDYAFEFIIKNGGIDTEADYPYKAADGRCDQNRKNAKVVTIDSYEDVPENSEASLKKA 263

Query: 241 VSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQN 300
           ++ QP+SVAI+A    F+ YS GVF G CG  L+H V  VGYG+ N   YW+++NSWG  
Sbjct: 264 LAHQPISVAIEAGGRAFQLYSSGVFDGICGTELDHGVVAVGYGTENGKDYWIVRNSWGNR 323

Query: 301 WGEGGFIRMRRDVG-GAGLCGIARKASYPI 329
           WGE G+I+M R++    G CGIA +ASYPI
Sbjct: 324 WGESGYIKMARNIAEPTGKCGIAMEASYPI 353


>gi|225428879|ref|XP_002285299.1| PREDICTED: cysteine proteinase RD21a-like [Vitis vinifera]
          Length = 469

 Score =  285 bits (730), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 149/330 (45%), Positives = 206/330 (62%), Gaps = 11/330 (3%)

Query: 5   MVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREG 64
           ++++   +  RT  E  + A +E W+ +  ++Y    E+  RF+IFK N RFIE+ N   
Sbjct: 35  IISYGDRLEKRTDAE--VMAVYEAWLVKHGKSYNALGERERRFEIFKDNLRFIEEHNAV- 91

Query: 65  NQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDW 124
           N+TYK+ LN FADLT+EE+ + + G +  TR     S+      F    +   LP S+DW
Sbjct: 92  NRTYKVGLNRFADLTNEEYRSRYLGRRDETRRGLRASRVSDRYSF---RAGEDLPESVDW 148

Query: 125 RARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGG 182
           R +GAV PVK+QG+CG CW FS +AAVEGI +I TG LISLSEQ+++DC  S  +GC GG
Sbjct: 149 REKGAVVPVKDQGNCGSCWAFSTIAAVEGINQIATGDLISLSEQELVDCDKSYNQGCNGG 208

Query: 183 WMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAV 241
            MD AF +II + G+  E  YPY+  +  C+  R   +   I  Y+DVP   E +L+ AV
Sbjct: 209 LMDYAFEFIINNGGIDSEEDYPYRAADTTCDPNRKNARVVSIDGYEDVPQNDERSLKKAV 268

Query: 242 SRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNW 301
           + QPVSVAI+A    F+ Y  GVF G CG  L+H V  VGYG+ N   YW+++NSWG NW
Sbjct: 269 ANQPVSVAIEAGGRAFQLYQSGVFTGQCGTQLDHGVVAVGYGTENSVDYWIVRNSWGPNW 328

Query: 302 GEGGFIRMRRDVGG--AGLCGIARKASYPI 329
           GE G+I++ R++ G   G CGIA + SYPI
Sbjct: 329 GESGYIKLERNLAGTETGKCGIAIEPSYPI 358


>gi|535473|emb|CAA53377.1| cysteine protease [Vicia sativa]
          Length = 368

 Score =  285 bits (730), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 146/317 (46%), Positives = 203/317 (64%), Gaps = 12/317 (3%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +   +E W+ +  + Y    EK  RF+IFK N  FI++ N + N TY + LN+FAD+T
Sbjct: 33  DEVMTMYEEWLVKHQKVYNGLREKDQRFQIFKDNLNFIDEHNAQ-NYTYIVGLNKFADMT 91

Query: 80  DEEFIASHTGYK--MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQG 137
           +EE+   + G +  +  R + N+   +    + Y    R LP  +DWR +GA+T +K+QG
Sbjct: 92  NEEYRDMYLGTRSDIKRRIMKNKITGHR---YAYNSGDR-LPVHVDWRLKGAITHIKDQG 147

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIRSQ 195
           SCG CW FS +A VE I KI TG+L+SLSEQ+++DC  + + GC GG MD AF +II + 
Sbjct: 148 SCGSCWAFSTIATVEAINKIVTGKLVSLSEQELVDCDRAFNEGCNGGLMDYAFEFIIGNG 207

Query: 196 GLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASS 254
           G+  ++ YPY+  EG C+  R   K   I  Y+DVP++ E AL+ AV+ QPVSVAI+AS 
Sbjct: 208 GIDTDQHYPYKGFEGRCDPTRKKAKIVSIDGYEDVPSNNENALKKAVAHQPVSVAIEASG 267

Query: 255 PGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG 314
              + Y  GVF G CG +L+HAV IVGYGS N   YWL++NSWG NWGE G+ +M R+V 
Sbjct: 268 RALQLYQSGVFTGKCGTSLDHAVVIVGYGSENGLDYWLVRNSWGTNWGEDGYFKMERNVK 327

Query: 315 G--AGLCGIARKASYPI 329
           G   G CGIA +ASYP+
Sbjct: 328 GTHTGKCGIAVEASYPV 344


>gi|156142226|gb|ABU51882.1| ervatamin-C precursor [Tabernaemontana divaricata]
          Length = 365

 Score =  285 bits (730), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 153/316 (48%), Positives = 199/316 (62%), Gaps = 21/316 (6%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           ++ +   +ELW+A+  + Y    E   RF+IFK N +FI++ N E N TYK+ L  + DL
Sbjct: 38  DEEVKEIYELWLAKHDKVYSGLVEYEKRFEIFKDNLKFIDEHNSE-NHTYKMGLTPYTDL 96

Query: 79  TDEEFIASHTGYKMPT----RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVK 134
           T+EEF A + G +  T    +   N S+ YA       ++   LP  IDWR +GAVTPVK
Sbjct: 97  TNEEFQAIYLGTRSDTIHRLKRTINISERYAY------EAGDNLPEQIDWRKKGAVTPVK 150

Query: 135 NQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-GSRGCYGGWMDDAFSYIIR 193
           NQG CG CW FS V+ VE I +IRTG LISLSEQQ++DC+  + GC GG    A+ YII 
Sbjct: 151 NQGKCGSCWAFSTVSTVESINQIRTGNLISLSEQQLVDCNKKNHGCKGGAFVYAYQYIID 210

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDA 252
           + G+  E  YPY+  +G C   R A K  RI  Y+ VP  +E AL+ AV+ QP  VAIDA
Sbjct: 211 NGGIDTEANYPYKAVQGPC---RAAKKVVRIDGYKGVPHCNENALKKAVASQPSVVAIDA 267

Query: 253 SSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRD 312
           SS  F++Y  G+F+GPCG  LNH V IVGY       YW+++NSWG+ WGE G+IRM+R 
Sbjct: 268 SSKQFQHYKSGIFSGPCGTKLNHGVVIVGYWKD----YWIVRNSWGRYWGEQGYIRMKR- 322

Query: 313 VGGAGLCGIARKASYP 328
           VGG GLCGIAR   YP
Sbjct: 323 VGGCGLCGIARLPYYP 338


>gi|224103643|ref|XP_002313136.1| predicted protein [Populus trichocarpa]
 gi|222849544|gb|EEE87091.1| predicted protein [Populus trichocarpa]
          Length = 477

 Score =  285 bits (728), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 143/308 (46%), Positives = 193/308 (62%), Gaps = 8/308 (2%)

Query: 26  HELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIA 85
           +E+W+ +  + Y    EK  RF+IFK N +F+++ N  GN +YKL LN+FADL++EE+ A
Sbjct: 49  YEMWLVKYGKAYNALGEKERRFEIFKDNLKFVDQHNSVGNPSYKLGLNKFADLSNEEYRA 108

Query: 86  SHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIF 145
           ++ G +M  +         A   F   D    LP S+DWR +GAV PVK+QG CG CW F
Sbjct: 109 AYLGTRMDGKRRLLGGPKSARYLFKDGDD---LPESVDWREKGAVAPVKDQGQCGSCWAF 165

Query: 146 SAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSYIIRSQGLTDERVY 203
           S V AVEGI +I TG L SLSEQ+++DC    ++GC GG MD AF +I+++ G+  E  Y
Sbjct: 166 STVGAVEGINQIVTGNLTSLSEQELVDCDKVYNQGCNGGLMDYAFEFIMKNGGIDTEEDY 225

Query: 204 PYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSG 262
           PY+  +  C+  R   +   I  Y+DVP   E +LR AV+ QPVSVAI+A    F+ Y  
Sbjct: 226 PYKAVDSMCDPNRKNARVVTIDGYEDVPQNDEKSLRKAVANQPVSVAIEAGGRAFQLYQS 285

Query: 263 GVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG--AGLCG 320
           GVF G CG  L+H V  VGYG+ N   YW+++NSWG  WGE G+IRM R+V     G CG
Sbjct: 286 GVFTGSCGTQLDHGVVAVGYGTENGVDYWVVRNSWGPAWGENGYIRMERNVASTETGKCG 345

Query: 321 IARKASYP 328
           IA +ASYP
Sbjct: 346 IAMEASYP 353


>gi|356508490|ref|XP_003522989.1| PREDICTED: xylem cysteine proteinase 2-like [Glycine max]
          Length = 349

 Score =  285 bits (728), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 149/313 (47%), Positives = 202/313 (64%), Gaps = 12/313 (3%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +    E WM++  + Y++  EK +RF+IFK N + I++ N+  +  Y L LNEFADL+
Sbjct: 41  DKLIELFESWMSKHGKIYQSIEEKLLRFEIFKDNLKHIDERNKVVS-NYWLGLNEFADLS 99

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
            +EF   + G K+   + S + +S     F Y D    LP+S+DWR +GAV PVKNQGSC
Sbjct: 100 HQEFKNKYLGLKV---DYSRRRESPEE--FTYKDVE--LPKSVDWRKKGAVAPVKNQGSC 152

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGL 197
           G CW FS VAAVEGI +I TG L SLSEQ+++DC  +   GC GG MD AFS+I+ + GL
Sbjct: 153 GSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDRTYNNGCNGGLMDYAFSFIVENGGL 212

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPG 256
             E  YPY   EG C   +   +   I  Y DVP  +E +L  A++ QP+SVAI+AS   
Sbjct: 213 HKEEDYPYIMEEGTCEMTKEETEVVTISGYHDVPQNNEQSLLKALANQPLSVAIEASGRD 272

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG- 315
           F++YSGGVF G CG++L+H V  VGYG++    Y ++KNSWG  WGE G+IRMRR++G  
Sbjct: 273 FQFYSGGVFDGHCGSDLDHGVAAVGYGTAKGVDYIIVKNSWGSKWGEKGYIRMRRNIGKP 332

Query: 316 AGLCGIARKASYP 328
            G+CGI + ASYP
Sbjct: 333 EGICGIYKMASYP 345


>gi|414585111|tpg|DAA35682.1| TPA: cysteine proteinase Mir3 [Zea mays]
          Length = 468

 Score =  285 bits (728), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 144/309 (46%), Positives = 201/309 (65%), Gaps = 15/309 (4%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEFADLTDEEFIA 85
           WMA   RTY    E+  R+++F+ N R+I+  N     G  +++L LN FADLT++E+ A
Sbjct: 49  WMAAHGRTYNAVGEEERRYQVFRDNLRYIDAHNAAADAGVHSFRLGLNRFADLTNDEYRA 108

Query: 86  SHTGYKM-PTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWI 144
           ++ G +  P R     ++ +A +          LP S+DWRA+GAV  VK+QGSCG CW 
Sbjct: 109 TYLGARTRPQRERKLGARYHAAD-------NEDLPESVDWRAKGAVAEVKDQGSCGSCWA 161

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERV 202
           FS +AAVEGI +I TG LISLSEQ+++DC  S  +GC GG MD AF +II + G+  E+ 
Sbjct: 162 FSTIAAVEGINQIVTGDLISLSEQELVDCDTSYNQGCNGGLMDYAFEFIINNGGIDTEKD 221

Query: 203 YPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYS 261
           YPY+  +G C+  R   K   I SY+DVP + E +L+ AV+ QPVSVAI+A+   F+ YS
Sbjct: 222 YPYKGTDGRCDVNRKNAKVVTIDSYEDVPANDEKSLQKAVANQPVSVAIEAAGTAFQLYS 281

Query: 262 GGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV-GGAGLCG 320
            G+F G CG  L+H VT VGYG+ N   YW++KNSWG +WGE G++RM R++   +G CG
Sbjct: 282 SGIFTGSCGTALDHGVTAVGYGTENGKDYWIVKNSWGSSWGESGYVRMERNIKASSGKCG 341

Query: 321 IARKASYPI 329
           IA + SYP+
Sbjct: 342 IAVEPSYPL 350


>gi|317106666|dbj|BAJ53169.1| JHL18I08.3 [Jatropha curcas]
          Length = 441

 Score =  285 bits (728), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 148/311 (47%), Positives = 188/311 (60%), Gaps = 8/311 (2%)

Query: 22  ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDE 81
           I+   E W  Q  +TY +Q EK  R K+F+ N+ F+ + N +GN +Y LSLN FADLT  
Sbjct: 26  IAHLFETWCQQHGKTYASQEEKLFRLKVFQDNYDFVTEHNSQGNSSYTLSLNAFADLTHH 85

Query: 82  EFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGC 141
           EF AS  G         N  +S        PD    +P S+DWR  GAVT VK+QG+CG 
Sbjct: 86  EFKASRLGLSSAASASLNVDRSNRQ----IPDFVADVPASVDWRKNGAVTQVKDQGNCGA 141

Query: 142 CWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTD 199
           CW FSA  A+EGI KI TG L+SLSEQ+++DC  S   GC GG MD AF ++I + G+  
Sbjct: 142 CWSFSATGAIEGINKIVTGSLVSLSEQELVDCDKSYNNGCEGGIMDYAFQFVIDNHGIDT 201

Query: 200 ERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFR 258
           E  YPYQ R+  CN ++       I  Y DVP  +E  L  AV+ QPVSV I  S   F+
Sbjct: 202 EEDYPYQGRDRSCNKEKLKRHVVTIDGYVDVPQNNEKELLKAVANQPVSVGICGSERAFQ 261

Query: 259 YYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-G 317
            YS G+F GPC  +L+HAV IVGYGS N   YW++KNSWG  WG  G++ M+R+ G + G
Sbjct: 262 LYSKGIFTGPCSTSLDHAVLIVGYGSENGVDYWIVKNSWGSYWGMDGYMHMQRNSGSSRG 321

Query: 318 LCGIARKASYP 328
           LCGI   ASYP
Sbjct: 322 LCGINMLASYP 332


>gi|224056176|ref|XP_002298740.1| predicted protein [Populus trichocarpa]
 gi|222845998|gb|EEE83545.1| predicted protein [Populus trichocarpa]
          Length = 455

 Score =  285 bits (728), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 144/315 (45%), Positives = 192/315 (60%), Gaps = 22/315 (6%)

Query: 26  HELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIA 85
           +E+W+ +  R Y    EK  RF+IFK N +FI++ N  GN +YKL LN+FADL+++E+ +
Sbjct: 25  YEMWLVKHGRAYNALGEKERRFEIFKDNLKFIDEHNSVGNPSYKLGLNKFADLSNDEYRS 84

Query: 86  SHTGYKMPTRNISNQSQSYANNWFGYPDSRR-------GLPRSIDWRARGAVTPVKNQGS 138
            + G +M  +              G P S R        LP ++DWR +GAV PVK+QG 
Sbjct: 85  VYLGTRMDGKG----------RLLGGPKSERYLFKEGDDLPETVDWREKGAVAPVKDQGQ 134

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQG 196
           CG CW FS V AVEGI +I TG L SLSEQ+++DC  +   GC GG MD AF +II + G
Sbjct: 135 CGSCWAFSTVGAVEGINQIVTGNLTSLSEQELVDCDKTYNLGCNGGLMDYAFDFIIENGG 194

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSP 255
           +  E  YPY+  +  C+  R   +   I  Y+DVP   E +L+ AV+ QPVSVAI+A   
Sbjct: 195 IDTEEDYPYKAIDSMCDPNRKNARVVTIDGYEDVPQNDEKSLKKAVANQPVSVAIEAGGR 254

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG 315
           GF+ Y  GVF G CG  L+H V  VGYG+ +   YW+++NSWG  WGE G+IRM RDV  
Sbjct: 255 GFQLYQSGVFTGSCGTQLDHGVVTVGYGTEHGVDYWIVRNSWGPAWGENGYIRMERDVAS 314

Query: 316 --AGLCGIARKASYP 328
              G CGIA +ASYP
Sbjct: 315 TETGKCGIAMEASYP 329


>gi|3377950|emb|CAA08861.1| cysteine proteinase precursor, AN11 [Ananas comosus]
          Length = 357

 Score =  284 bits (727), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 151/334 (45%), Positives = 208/334 (62%), Gaps = 14/334 (4%)

Query: 1   MLIIMVTWASL-VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
            L + V WAS    SR    D +  + E WMA+  R YK+  EK  RF+IFK N   IE 
Sbjct: 11  FLFLCVMWASPSAASRDEPSDPMMKRFEEWMAEYGRVYKDNDEKMRRFQIFKNNVNHIET 70

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGL 118
           FN     +Y L +N+F D+T+ EF+A +TG  +P  NI  +          + D     +
Sbjct: 71  FNSRNGNSYTLGINQFTDMTNNEFVAQYTGVSLPL-NIEREPV------VSFDDVDISAV 123

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRG 178
           P+SIDWR  GAVT VKN   CG CW F+A+A VE I KI+ G LISLSEQQVLDC+ S G
Sbjct: 124 PQSIDWRNYGAVTSVKNHIPCGSCWAFAAIATVESIYKIKRGYLISLSEQQVLDCAVSYG 183

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQ-RGAMKAARIRSYQDVPT-SELA 236
           C GGW++ A+ +II ++G+    +YPY+  +G    +  G   +A I  Y  V + +E +
Sbjct: 184 CDGGWVNKAYDFIISNKGVASAAIYPYKASQGQGTCRINGVPNSAYITGYTRVQSNNERS 243

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKN 295
           + YAVS QP++ +I+AS   F++Y  GVF+GPCG +LNHA+TI+GYG  + G  +W+++N
Sbjct: 244 MMYAVSNQPIAASIEASG-DFQHYKRGVFSGPCGTSLNHAITIIGYGQDSSGKKFWIVRN 302

Query: 296 SWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYP 328
           SWG +WGE G+IRM RDV   +GLCGIA +  YP
Sbjct: 303 SWGASWGERGYIRMARDVSSSSGLCGIAIRPLYP 336


>gi|226495425|ref|NP_001148706.1| cysteine protease 1 precursor [Zea mays]
 gi|195621544|gb|ACG32602.1| cysteine protease 1 precursor [Zea mays]
          Length = 463

 Score =  284 bits (727), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 144/309 (46%), Positives = 201/309 (65%), Gaps = 15/309 (4%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEFADLTDEEFIA 85
           WMA   RTY    E+  R+++F+ N R+I+  N     G  +++L LN FADLT++E+ A
Sbjct: 44  WMAAHGRTYNAVGEEERRYQVFRDNLRYIDAHNAAADAGVHSFRLGLNRFADLTNDEYRA 103

Query: 86  SHTGYKM-PTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWI 144
           ++ G +  P R     ++ +A +          LP S+DWRA+GAV  VK+QGSCG CW 
Sbjct: 104 TYLGARTRPQRERKLGARYHAAD-------NEDLPESVDWRAKGAVAEVKDQGSCGSCWA 156

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERV 202
           FS +AAVEGI +I TG LISLSEQ+++DC  S  +GC GG MD AF +II + G+  E+ 
Sbjct: 157 FSTIAAVEGINQIVTGDLISLSEQELVDCDTSYNQGCNGGLMDYAFEFIINNGGIDTEKD 216

Query: 203 YPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYS 261
           YPY+  +G C+  R   K   I SY+DVP + E +L+ AV+ QPVSVAI+A+   F+ YS
Sbjct: 217 YPYKGTDGRCDVNRKNAKVVTIDSYEDVPANDEKSLQKAVANQPVSVAIEAAGTAFQLYS 276

Query: 262 GGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV-GGAGLCG 320
            G+F G CG  L+H VT VGYG+ N   YW++KNSWG +WGE G++RM R++   +G CG
Sbjct: 277 SGIFTGSCGTALDHGVTAVGYGTENGKDYWIVKNSWGSSWGESGYVRMERNIKASSGKCG 336

Query: 321 IARKASYPI 329
           IA + SYP+
Sbjct: 337 IAVEPSYPL 345


>gi|413951605|gb|AFW84254.1| hypothetical protein ZEAMMB73_933931 [Zea mays]
          Length = 423

 Score =  284 bits (727), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 153/344 (44%), Positives = 208/344 (60%), Gaps = 16/344 (4%)

Query: 1   MLIIMVTWASLVMSRTLH--EDSISAKHELWM-----AQSARTYKNQAEKAMRFKIFKKN 53
           + ++ V+ A++ + R +   E  +++   LW          R +++  EK  RF  FK+N
Sbjct: 55  VALVFVSSAAVELCRAIDFDERDLASDEALWDLYERWQTHHRVHRHHGEKGRRFGTFKEN 114

Query: 54  FRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPT--RNISNQSQSYANNWFGY 111
            RFI   N+ G++ Y+L LN F D+  EEF ++    ++    R  S  +++ A   F Y
Sbjct: 115 VRFIHAHNKRGDRPYRLRLNRFGDMGREEFRSTFADSRINDLRRQDSPAARAGAVPGFMY 174

Query: 112 PDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVL 171
            DS    PRS+DWR  GAVT VK+QG CG CW FS V AVEGI  IRTG L SLSEQ+++
Sbjct: 175 -DSAADPPRSVDWRQEGAVTGVKDQGHCGSCWAFSTVVAVEGINAIRTGSLASLSEQELI 233

Query: 172 DC-SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRG---AMKAARIRSY 227
           DC +   GC GG M++AF +I    G+T E  YPY+   G C+  R          I  +
Sbjct: 234 DCDTDENGCQGGLMENAFEFIKSFGGITTEAAYPYRASNGTCDGDRARRGGGVVVVIDGH 293

Query: 228 QDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSN 286
           Q VP  SE AL  AV+ QPVSVA+DA    F++YS GVF G CG +L+H V  VGYG  +
Sbjct: 294 QMVPAGSEDALAKAVAHQPVSVAVDAGGQAFQFYSEGVFTGDCGTDLDHGVAAVGYGVGD 353

Query: 287 EG-PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           +G PYW++KNSWG +WGEGG+IRM+R  G  GLCGIA +AS+PI
Sbjct: 354 DGTPYWIVKNSWGTSWGEGGYIRMQRGAGNGGLCGIAMEASFPI 397


>gi|242032709|ref|XP_002463749.1| hypothetical protein SORBIDRAFT_01g005350 [Sorghum bicolor]
 gi|241917603|gb|EER90747.1| hypothetical protein SORBIDRAFT_01g005350 [Sorghum bicolor]
          Length = 381

 Score =  284 bits (727), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 153/316 (48%), Positives = 200/316 (63%), Gaps = 17/316 (5%)

Query: 26  HELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQ-TYKLSLNEFADLTDEEFI 84
           +E W     R +++  EK  RF  FK+N RFI   N+ G++ +Y+L LN F D+  EEF 
Sbjct: 46  YERWQTHH-RVHRHHGEKGRRFGTFKENVRFIHAHNKRGDRPSYRLRLNRFGDMGPEEFR 104

Query: 85  ASHTGYKMPTRNISNQSQSYANNWFGYP-DSRRGLPRSIDWRARGAVTPVKNQGSCGCCW 143
           ++    ++       +S   A    G+  D    +PRS+DWR  GAVT VKNQG CG CW
Sbjct: 105 STFADSRINDLRRYRESSPAATAVPGFMYDDATDVPRSVDWRQHGAVTAVKNQGRCGSCW 164

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYIIRSQGLTDERV 202
            FS V AVEGI  IRTG L+SLSEQ+++DC +   GC GG M++AF +I    G+T E  
Sbjct: 165 AFSTVVAVEGINAIRTGSLVSLSEQELVDCDTAENGCQGGLMENAFDFIKSYGGITTESA 224

Query: 203 YPYQRREGYCNWQRGAMKAAR------IRSYQDVPT-SELALRYAVSRQPVSVAIDASSP 255
           YPY+   G C+     M+A R      I  +Q VPT SE AL  AV+RQPVSVAIDA   
Sbjct: 225 YPYRASNGTCD----GMRARRGRVHVSIDGHQMVPTGSEDALAKAVARQPVSVAIDAGGQ 280

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSN-EG-PYWLIKNSWGQNWGEGGFIRMRRDV 313
            F++YS GVF G CG +L+H V +VGYG S+ +G PYW++KNSWG +WGEGG+IRM+R  
Sbjct: 281 AFQFYSEGVFTGDCGTDLDHGVAVVGYGVSDVDGTPYWIVKNSWGPSWGEGGYIRMQRGA 340

Query: 314 GGAGLCGIARKASYPI 329
           G  GLCGIA +AS+PI
Sbjct: 341 GNGGLCGIAMEASFPI 356


>gi|2351107|dbj|BAA21929.1| bromelain [Ananas comosus]
          Length = 312

 Score =  284 bits (727), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 147/305 (48%), Positives = 193/305 (63%), Gaps = 16/305 (5%)

Query: 30  MAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTG 89
           MA+  R YK+  EK  RF+IFK N   IE FN     +Y L +N+F D+T+ EF+A +TG
Sbjct: 1   MAEYGRVYKDNDEKMRRFQIFKNNVNHIETFNNRNGNSYTLGINKFTDMTNNEFVAQYTG 60

Query: 90  YKMPTRNISNQSQSYANNWFGYPDSR-RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAV 148
                 NI  +          + D     + +SIDWR  GAVT VK+Q  CG CW FSA+
Sbjct: 61  GISRPLNIEKEPV------VSFDDVNISAVGQSIDWRDYGAVTEVKDQNPCGSCWAFSAI 114

Query: 149 AAVEGITKIRTGRLISLSEQQVLDCSGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRR 208
           A VEGI KI TG L+SLSEQ+VLDC+ S GC GG++D+A+ +II + G+  E  YPYQ  
Sbjct: 115 ATVEGIYKIVTGYLVSLSEQEVLDCAVSNGCDGGFVDNAYDFIISNNGVASEADYPYQAY 174

Query: 209 EGYC---NWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGFRYYSGGV 264
           +G C   +W      +A I  Y  V    E +++YAV  QP++ AIDAS   F+YY+GGV
Sbjct: 175 QGDCAANSWP----NSAYITGYSYVRSNDESSMKYAVWNQPIAAAIDASGDNFQYYNGGV 230

Query: 265 FAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIAR 323
           F+GPCG +LNHA+TI+GYG  + G  YW++KNSWG +WGE G+IRM R V  +GLCGIA 
Sbjct: 231 FSGPCGTSLNHAITIIGYGQDSSGTQYWIVKNSWGSSWGERGYIRMARGVSSSGLCGIAM 290

Query: 324 KASYP 328
              YP
Sbjct: 291 DPLYP 295


>gi|297845064|ref|XP_002890413.1| hypothetical protein ARALYDRAFT_472321 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336255|gb|EFH66672.1| hypothetical protein ARALYDRAFT_472321 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 357

 Score =  284 bits (727), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 149/314 (47%), Positives = 201/314 (64%), Gaps = 10/314 (3%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +    E W++   + Y+   EK +RF++FK N + I++ N++  ++Y L LNEFADL+
Sbjct: 45  DKLIELFENWISNFEKAYETVEEKLLRFEVFKDNLKHIDETNKK-VKSYWLGLNEFADLS 103

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
            EEF   + G K       ++ +SYA   F Y D    +P+S+DWR +GAV  VKNQGSC
Sbjct: 104 HEEFKKMYLGLKTDIVR-RDEERSYAE--FAYRDVE-AVPKSVDWRKKGAVAEVKNQGSC 159

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGL 197
           G CW FS VAAVEGI KI TG L +LSEQ+++DC  +   GC GG MD AF YI+++ GL
Sbjct: 160 GSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDTTYNNGCNGGLMDYAFEYIVKNGGL 219

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPG 256
             E  YPY   EG C  Q+   +   I  +QDVPT+ E +L  A++ QP+SVAIDAS   
Sbjct: 220 RKEEDYPYSMEEGTCEMQKDESETVTIDGHQDVPTNDEKSLLKALAHQPLSVAIDASGRE 279

Query: 257 FRYYSG-GVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG 315
           F++YSG  VF G CG +L+H V  VGYGSS    Y ++KNSWG  WGE G+IR++R+ G 
Sbjct: 280 FQFYSGVSVFDGRCGVDLDHGVAAVGYGSSKGSDYIIVKNSWGPKWGEKGYIRLKRNTGK 339

Query: 316 -AGLCGIARKASYP 328
             GLCGI + AS+P
Sbjct: 340 PEGLCGINKMASFP 353


>gi|224083362|ref|XP_002306996.1| predicted protein [Populus trichocarpa]
 gi|222856445|gb|EEE93992.1| predicted protein [Populus trichocarpa]
          Length = 336

 Score =  284 bits (727), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 153/313 (48%), Positives = 196/313 (62%), Gaps = 11/313 (3%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D I    E W+++  + Y++  EK  RF+IFK N   I++ N++    Y L LNEFADL+
Sbjct: 27  DRIIDLFESWISKHQKIYESIEEKWHRFEIFKDNLFHIDETNKK-VVNYWLGLNEFADLS 85

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
            EEF   + G  +   N    S+      F Y D    +P+S+DWR +GAVT VKNQGSC
Sbjct: 86  HEEFKNKYLGLNVDLSNRRECSEE-----FTYKDVS-SIPKSVDWRKKGAVTDVKNQGSC 139

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGL 197
           G CW FS VAAVEGI +I TG L SLSEQ+++DC  +   GC GG MD AF+YII + GL
Sbjct: 140 GSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCDTTYNNGCNGGLMDYAFAYIISNGGL 199

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPG 256
             E  YPY   EG C  ++   +   I  Y DVP  SE +L  A++ QP+SVAIDAS   
Sbjct: 200 HKEEDYPYIMEEGTCEMRKAESEVVTISGYHDVPQNSEESLLKALANQPLSVAIDASGRD 259

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG- 315
           F++YSGGVF G CG  L+H V  VGYGS+    + ++KNSWG  WGE GFIRM+R+ G  
Sbjct: 260 FQFYSGGVFDGHCGTELDHGVAAVGYGSAKGLDFIVVKNSWGSKWGEKGFIRMKRNTGKP 319

Query: 316 AGLCGIARKASYP 328
           AGLCGI + ASYP
Sbjct: 320 AGLCGINKMASYP 332


>gi|194352752|emb|CAQ00104.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
          Length = 351

 Score =  284 bits (726), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 156/317 (49%), Positives = 199/317 (62%), Gaps = 15/317 (4%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +    E W+A+  + Y +  EK  RF++FK N + I++ NRE   +Y L LNEFADLT
Sbjct: 38  DRLVELFEKWLAKHQKAYASFEEKLHRFEVFKDNLKLIDEINRE-VTSYWLGLNEFADLT 96

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRARGAVTPVKNQGS 138
            +EF  ++ G   P    S+         F Y + +   LP+++DWR +GAVT VKNQG 
Sbjct: 97  HDEFKTTYLGLSPPPARRSSSRS------FRYENVAAHDLPKAVDWRKKGAVTDVKNQGQ 150

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYIIRSQG 196
           CG CW FS VAAVEGI  I TG L +LSEQ+++DCS  G+ GC GG MD AFSYI  S G
Sbjct: 151 CGSCWAFSTVAAVEGINAIVTGNLTALSEQELIDCSVDGNSGCNGGMMDYAFSYIASSGG 210

Query: 197 LTDERVYPYQRREGYC-NWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASS 254
           L  E  YPY   EG C + ++   +A  I  Y+DVPT  E AL  A++ QPVSVAI+AS 
Sbjct: 211 LHTEEAYPYLMEEGSCGDGKKSESEAVSISGYEDVPTKDEQALIKALAHQPVSVAIEASG 270

Query: 255 PGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG--PYWLIKNSWGQNWGEGGFIRMRRD 312
             F++YSGGVF GPCG  L+H V  VGYGS       Y ++KNSWG  WGE G+IRM+R 
Sbjct: 271 RHFQFYSGGVFDGPCGAQLDHGVAAVGYGSDKGKGHDYIIVKNSWGGKWGEKGYIRMKRG 330

Query: 313 VGGA-GLCGIARKASYP 328
            G + GLCGI + ASYP
Sbjct: 331 TGKSEGLCGINKMASYP 347


>gi|3377948|emb|CAA08860.1| cysteine proteinase precursor, AN8 [Ananas comosus]
          Length = 356

 Score =  284 bits (726), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 152/333 (45%), Positives = 200/333 (60%), Gaps = 13/333 (3%)

Query: 1   MLIIMVTWASL-VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
            L + V WAS    S     D +  + E WM +  R YK+  EK  RF+IFK N   IE 
Sbjct: 11  FLFLCVMWASPSAASADEPSDPMMKRFEEWMVEYGRVYKDNDEKMRRFQIFKNNVNHIET 70

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSR-RGL 118
           FN     +Y L +N+F D+T+ EF+A +TG      NI  +          + D     +
Sbjct: 71  FNSRNKDSYTLGINQFTDMTNNEFVAQYTGGISRPLNIEREPV------VSFDDVDISAV 124

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRG 178
           P+SIDWR  GAVT VKNQ  CG CW F+A+A VE I KI+ G L  LSEQQVLDC+   G
Sbjct: 125 PQSIDWRDYGAVTSVKNQNPCGACWAFAAIATVESIYKIKKGILEPLSEQQVLDCAKGYG 184

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELAL 237
           C GGW   AF +II ++G+    +YPY+  +G C    G   +A I  Y  VP  +E ++
Sbjct: 185 CKGGWEFRAFEFIISNKGVASVAIYPYKAAKGTCK-TNGVPNSAYITGYARVPRNNESSM 243

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYG-SSNEGPYWLIKNS 296
            YAVS+QP++VA+DA++   +YY+ GVF GPCG +LNHAVT +GYG  SN   YW++KNS
Sbjct: 244 MYAVSKQPITVAVDANANS-QYYNSGVFNGPCGTSLNHAVTAIGYGQDSNGKKYWIVKNS 302

Query: 297 WGQNWGEGGFIRMRRDV-GGAGLCGIARKASYP 328
           WG  WGE G+IRM RDV   +G+CGIA  + YP
Sbjct: 303 WGARWGEAGYIRMARDVSSSSGICGIAIDSLYP 335


>gi|413951606|gb|AFW84255.1| hypothetical protein ZEAMMB73_933931 [Zea mays]
          Length = 379

 Score =  284 bits (726), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 153/344 (44%), Positives = 208/344 (60%), Gaps = 16/344 (4%)

Query: 1   MLIIMVTWASLVMSRTLH--EDSISAKHELWM-----AQSARTYKNQAEKAMRFKIFKKN 53
           + ++ V+ A++ + R +   E  +++   LW          R +++  EK  RF  FK+N
Sbjct: 11  VALVFVSSAAVELCRAIDFDERDLASDEALWDLYERWQTHHRVHRHHGEKGRRFGTFKEN 70

Query: 54  FRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPT--RNISNQSQSYANNWFGY 111
            RFI   N+ G++ Y+L LN F D+  EEF ++    ++    R  S  +++ A   F Y
Sbjct: 71  VRFIHAHNKRGDRPYRLRLNRFGDMGREEFRSTFADSRINDLRRQDSPAARAGAVPGFMY 130

Query: 112 PDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVL 171
            DS    PRS+DWR  GAVT VK+QG CG CW FS V AVEGI  IRTG L SLSEQ+++
Sbjct: 131 -DSAADPPRSVDWRQEGAVTGVKDQGHCGSCWAFSTVVAVEGINAIRTGSLASLSEQELI 189

Query: 172 DC-SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRG---AMKAARIRSY 227
           DC +   GC GG M++AF +I    G+T E  YPY+   G C+  R          I  +
Sbjct: 190 DCDTDENGCQGGLMENAFEFIKSFGGITTEAAYPYRASNGTCDGDRARRGGGVVVVIDGH 249

Query: 228 QDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSN 286
           Q VP  SE AL  AV+ QPVSVA+DA    F++YS GVF G CG +L+H V  VGYG  +
Sbjct: 250 QMVPAGSEDALAKAVAHQPVSVAVDAGGQAFQFYSEGVFTGDCGTDLDHGVAAVGYGVGD 309

Query: 287 EG-PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           +G PYW++KNSWG +WGEGG+IRM+R  G  GLCGIA +AS+PI
Sbjct: 310 DGTPYWIVKNSWGTSWGEGGYIRMQRGAGNGGLCGIAMEASFPI 353


>gi|147772785|emb|CAN62838.1| hypothetical protein VITISV_003391 [Vitis vinifera]
          Length = 298

 Score =  284 bits (726), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 154/336 (45%), Positives = 199/336 (59%), Gaps = 57/336 (16%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L I+  WAS   SR+LHE S+  +HE WMA+  R YK+  EK  RFKIFK N       
Sbjct: 14  LLFILAAWASQATSRSLHEASMYERHEDWMARYGRMYKDANEKEKRFKIFKDN------- 66

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
                                  +A  T +K    N++                   +P 
Sbjct: 67  -----------------------VAQATTFKY--ENVT------------------AVPS 83

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SR 177
           +IDWR +GAVTP+K+Q  CG CW FSAVAA EGIT+I TG+LISLSEQ+++DC     ++
Sbjct: 84  TIDWRKKGAVTPIKDQQQCGSCWAFSAVAATEGITQITTGKLISLSEQELVDCDTGGENQ 143

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GG  DDAF + I   GL  E  YPY+  +G CN ++ A  AA+I+ Y+DVP  +E A
Sbjct: 144 GCSGGLXDDAFRF-IXIHGLASEATYPYEGDDGTCNSKKEAHPAAKIKGYEDVPANNEKA 202

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKN 295
           L+ AV+ QPV+VAIDA    F++Y+ GVF G CG  L+H V  VGYG  ++G  YWL+KN
Sbjct: 203 LQKAVAHQPVAVAIDAGGFEFQFYTSGVFTGQCGTELDHGVAAVGYGIGDDGMXYWLVKN 262

Query: 296 SWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           SWG  WGE G+IRM+RDV    GLCGIA +ASYP A
Sbjct: 263 SWGTGWGEEGYIRMQRDVTAKEGLCGIAMQASYPTA 298


>gi|356517188|ref|XP_003527271.1| PREDICTED: xylem cysteine proteinase 2-like [Glycine max]
          Length = 350

 Score =  284 bits (726), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 150/313 (47%), Positives = 200/313 (63%), Gaps = 12/313 (3%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +    E WM++  + Y+N  EK +RF+IFK N + I++ N+  +  Y L LNEFADL+
Sbjct: 42  DKLIELFESWMSRHGKIYENIEEKLLRFEIFKDNLKHIDERNKVVS-NYWLGLNEFADLS 100

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
             EF   + G K+   + S + +S     F Y D    LP+S+DWR +GAV PVKNQGSC
Sbjct: 101 HREFNNKYLGLKV---DYSRRRESPEE--FTYKDVE--LPKSVDWRKKGAVAPVKNQGSC 153

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGL 197
           G CW FS VAAVEGI +I TG L SLSEQ+++DC  +   GC GG MD AFS+I+ + GL
Sbjct: 154 GSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDRTYNNGCNGGLMDYAFSFIVENGGL 213

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPG 256
             E  YPY   EG C   +   +   I  Y DVP  +E +L  A++ QP+SVAI+AS   
Sbjct: 214 HKEEDYPYIMEEGTCEMTKEETQVVTISGYHDVPQNNEQSLLKALANQPLSVAIEASGRD 273

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG- 315
           F++YSGGVF G CG++L+H V  VGYG++    Y  +KNSWG  WGE G+IRMRR++G  
Sbjct: 274 FQFYSGGVFDGHCGSDLDHGVAAVGYGTAKGVDYITVKNSWGSKWGEKGYIRMRRNIGKP 333

Query: 316 AGLCGIARKASYP 328
            G+CGI + ASYP
Sbjct: 334 EGICGIYKMASYP 346


>gi|255555337|ref|XP_002518705.1| cysteine protease, putative [Ricinus communis]
 gi|223542086|gb|EEF43630.1| cysteine protease, putative [Ricinus communis]
          Length = 471

 Score =  284 bits (726), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 148/310 (47%), Positives = 194/310 (62%), Gaps = 14/310 (4%)

Query: 26  HELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIA 85
           +E+W+ +  + Y    EK  RF+IFK N RFI++ N   +++YK+ LN FADLT+EE+ A
Sbjct: 51  YEMWLVEHGKAYNALGEKEKRFEIFKDNLRFIDEHNSV-DRSYKVGLNRFADLTNEEYKA 109

Query: 86  SHTGYKMPTRN--ISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCW 143
              G KM  +N  +  +SQ Y    F   D    LP ++DWR +GAV PVK+QG CG CW
Sbjct: 110 MFLGTKMERKNRFLGTRSQRY---LFKDGDD---LPENVDWREKGAVVPVKDQGQCGSCW 163

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDER 201
            FS V AVEGI +I TG LISLSEQ+++DC  S  +GC GG MD AF +II + G+  E 
Sbjct: 164 AFSTVGAVEGINQIVTGELISLSEQELVDCDKSYNQGCNGGLMDYAFEFIINNGGIDTEE 223

Query: 202 VYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYY 260
            YPY+  +  C+  R   K   I  Y+DVP   E +L+ AV+ QPVSVAI+A    F+ Y
Sbjct: 224 DYPYKASDNICDPNRKNAKVVTIDGYEDVPENDENSLKKAVAHQPVSVAIEAGGRAFQLY 283

Query: 261 SGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG--AGL 318
             GVF G CG  L+H V  VGYG+ N   YW+++NSWG  WGE G+IRM R+V     G 
Sbjct: 284 KSGVFTGRCGTELDHGVVAVGYGTENGVNYWIVRNSWGSAWGESGYIRMERNVANTKTGK 343

Query: 319 CGIARKASYP 328
           CGIA + SYP
Sbjct: 344 CGIAIQPSYP 353


>gi|162463464|ref|NP_001104879.1| cysteine proteinase Mir3 precursor [Zea mays]
 gi|2425066|gb|AAB88263.1| cysteine proteinase Mir3 [Zea mays]
          Length = 480

 Score =  284 bits (726), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 143/309 (46%), Positives = 201/309 (65%), Gaps = 15/309 (4%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEFADLTDEEFIA 85
           WMA   RTY     +  R+++F+ N R+I+  N     G  +++L LN FADLT++E+ A
Sbjct: 47  WMAAHGRTYNAVGAEERRYQVFRDNLRYIDAHNAAADAGVHSFRLGLNRFADLTNDEYPA 106

Query: 86  SHTGYKM-PTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWI 144
           ++ G +  P R+    ++ +A +          LP S+DWRA+GAV  VK+QGSCG CW 
Sbjct: 107 TYLGARTRPQRDRKLGARYHAAD-------NEDLPESVDWRAKGAVAEVKDQGSCGTCWA 159

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERV 202
           FS +AAVEGI +I TG LISLSEQ+++DC  S  +GC GG MD AF +II + G+  E+ 
Sbjct: 160 FSTIAAVEGINQIVTGDLISLSEQELVDCDTSYNQGCNGGLMDYAFEFIINNGGIDTEKD 219

Query: 203 YPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYS 261
           YPY+  +G C+  R   K   I SY+DVP + E +L+ AV+ QPVSVAI+A+   F+ YS
Sbjct: 220 YPYKGTDGRCDVNRKNAKVVTIDSYEDVPANDEKSLQKAVANQPVSVAIEAAGTAFQLYS 279

Query: 262 GGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV-GGAGLCG 320
            G+F G CG  L+H VT VGYG+ N   YW++KNSWG +WGE G++RM R++   +G CG
Sbjct: 280 SGIFTGSCGTRLDHGVTAVGYGTENGKDYWIVKNSWGSSWGESGYVRMERNIKASSGKCG 339

Query: 321 IARKASYPI 329
           IA + SYP+
Sbjct: 340 IAVEPSYPL 348


>gi|359491865|ref|XP_002273243.2| PREDICTED: xylem cysteine proteinase 1-like [Vitis vinifera]
          Length = 351

 Score =  283 bits (725), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 146/315 (46%), Positives = 203/315 (64%), Gaps = 15/315 (4%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D ++   E WM++  ++Y++  EK  RF++F+ N + I++ N++ + +Y L LNEFADL+
Sbjct: 42  DKLTDLFESWMSKHGKSYRSFEEKLHRFEVFQDNLKHIDETNKKVS-SYWLGLNEFADLS 100

Query: 80  DEEFIASHTGYK--MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQG 137
            EEF   + G K  +P R  S +  SY +           LP+S+DWR +GAV  VKNQG
Sbjct: 101 HEEFKRKYLGLKIELPKRRDSPEEFSYKD--------VADLPKSVDWRKKGAVAHVKNQG 152

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSYIIRSQ 195
           +CG CW FS VAAVEGI +I TG L +LSEQ+++DC    + GC GG MD AF++II + 
Sbjct: 153 ACGSCWAFSTVAAVEGINQIVTGNLTALSEQELIDCDKPFNNGCNGGLMDYAFAFIISNG 212

Query: 196 GLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASS 254
           GL  E  YPY   EG C  ++  ++   I  Y DVP  +E +   A++ QP+SVAI+ASS
Sbjct: 213 GLRKEEDYPYVMEEGTCGEKKEELEVVTISGYHDVPEDNEQSFLKALANQPLSVAIEASS 272

Query: 255 PGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG 314
            GF++YSGG+F G CG  L+H V  VGYG+S    Y  +KNSWG  WGE G+IRM+R+VG
Sbjct: 273 RGFQFYSGGIFNGHCGTELDHGVAAVGYGTSKGVDYITVKNSWGSKWGEKGYIRMKRNVG 332

Query: 315 G-AGLCGIARKASYP 328
              G+CGI + ASYP
Sbjct: 333 KPEGICGIYKMASYP 347


>gi|2511689|emb|CAB17074.1| cysteine proteinase precursor [Phaseolus vulgaris]
          Length = 364

 Score =  283 bits (725), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 146/340 (42%), Positives = 202/340 (59%), Gaps = 18/340 (5%)

Query: 1   MLIIMVTWASLVMSRTLH--EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIE 58
           +L++  T++       ++  E+ +   +E W+ +  + Y    EK  RF++FK N  FI+
Sbjct: 9   LLLLSFTFSHATAMSIINYSENEVMDMYEEWLVKHRKVYNGLDEKEKRFQVFKDNLGFIQ 68

Query: 59  KFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTR----NISNQSQSYANNWFGYPDS 114
             N + N TY L LN+FAD+T+EE+ A + G +   +       N    YA N      S
Sbjct: 69  DHNAQ-NNTYTLGLNKFADITNEEYRAMYLGTRTDAKRRVMKTQNTGHRYAYN------S 121

Query: 115 RRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS 174
              LP  +DWR +GAV P+K+QG+CG CW FS VAAVEGI  I TG  +SLSEQ+++DC 
Sbjct: 122 GDQLPVHVDWRLKGAVGPIKDQGNCGSCWAFSTVAAVEGINNIVTGEFVSLSEQELVDCD 181

Query: 175 G--SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT 232
                GC GG MD AF +II++ G+  E  YPYQ  +G C+  +   K  +I  Y+DVP+
Sbjct: 182 REYDEGCNGGLMDYAFQFIIQNGGIDTEEDYPYQGIDGTCDQTKKKTKVVQIDGYEDVPS 241

Query: 233 S-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYW 291
           + E AL+ AVS QPVSVAI+AS    + Y  GVF G CG  L+H V +VGYG+ N   YW
Sbjct: 242 NNENALKKAVSHQPVSVAIEASGRALQLYQSGVFTGKCGTALDHGVVVVGYGTENGVDYW 301

Query: 292 LIKNSWGQNWGEGGFIRMRRDV--GGAGLCGIARKASYPI 329
           L++NSWG  WGE G+ +M R+V     G CGIA   SYP+
Sbjct: 302 LVRNSWGTGWGEDGYFKMERNVRSTSEGKCGIAMDCSYPV 341


>gi|225456820|ref|XP_002278323.1| PREDICTED: vignain [Vitis vinifera]
          Length = 360

 Score =  283 bits (725), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 146/329 (44%), Positives = 213/329 (64%), Gaps = 13/329 (3%)

Query: 11  LVMSRTLHEDSISAKHELW-MAQSARTY----KNQAEKAMRFKIFKKNFRFIEKFNREGN 65
           +V S   H+  +  +  LW + +  R++    ++  EK  RF +FK+N  F+ +FN++ +
Sbjct: 17  IVESFDFHQKELETEESLWNLYERWRSHHTVSRSLDEKHKRFNVFKENVNFVHEFNKK-D 75

Query: 66  QTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWR 125
           + YKL LN+FAD+T+ EF +++ G K+    +   SQ  A + F Y +  + +P S+DWR
Sbjct: 76  EPYKLKLNKFADMTNHEFRSTYAGSKVNHHRMFRGSQHAAGS-FMY-EKVKSVPPSVDWR 133

Query: 126 ARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRGCYGGW 183
            +GAVTP+K+QG CG CW FS V AVEGI  I+T +L+SLSEQ+++DC  S ++GC GG 
Sbjct: 134 KKGAVTPIKDQGQCGSCWAFSTVVAVEGINHIKTNKLVSLSEQELVDCDTSENQGCNGGL 193

Query: 184 MDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVS 242
           M  AF +I    G+T E+ YPY   +G C+  +       I  ++ V P +E AL  A +
Sbjct: 194 MGYAFEFIKEKGGITTEQSYPYTAEDGTCDVSKVNSPVVSIDGHETVPPNNEDALLKAAA 253

Query: 243 RQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNW 301
            QP+SVAIDA    F++YS GVFAG CG +L+H V IVGYG++ +G  YW++KNSWG +W
Sbjct: 254 NQPISVAIDAGGSAFQFYSEGVFAGRCGTDLDHGVAIVGYGTTLDGTKYWIVKNSWGTDW 313

Query: 302 GEGGFIRMRRDVGG-AGLCGIARKASYPI 329
           GE G+IRM+R +    GLCGIA +ASYPI
Sbjct: 314 GENGYIRMKRGISAKEGLCGIAVEASYPI 342


>gi|357115272|ref|XP_003559414.1| PREDICTED: thiol protease SEN102-like [Brachypodium distachyon]
          Length = 360

 Score =  283 bits (725), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 155/326 (47%), Positives = 202/326 (61%), Gaps = 20/326 (6%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGN-------QTYKLSLN 73
           +++++HE WMA+  RTY +  EKA R +IF+ N   I+ FN + +        +++L+ N
Sbjct: 38  AMASRHESWMAEHGRTYADAEEKARRLEIFRANAERIDSFNSKADAAAGESVDSHRLATN 97

Query: 74  EFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPV 133
            FADLTDEEF A+ TG + P          +    F       G   S+DWRA GAVT V
Sbjct: 98  RFADLTDEEFRAARTGLRRPAAVAGAVGGGFRYENFSLQADAAG---SMDWRAMGAVTGV 154

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSY 190
           K+QGSCGCCW FSAVAA+EG+TKIRTGRL+SLSEQQ++DC      +GC GG MD+AF Y
Sbjct: 155 KDQGSCGCCWAFSAVAAMEGLTKIRTGRLVSLSEQQLVDCDVYGDDQGCEGGLMDNAFQY 214

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVA 249
           I R  GL  E  YPY   +G       A  AA IR ++DVP  +E AL  AV+ QPVSVA
Sbjct: 215 ISRQGGLASESAYPYSGEDGGSCRSGRAQPAASIRGHEDVPANNEGALMAAVAHQPVSVA 274

Query: 250 IDASSPGFRYYS----GGVFAGPC-GNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGE 303
           I+     FR+Y     G    G C    L+HA+T VGYG + +G  YWL+KNSWG  WGE
Sbjct: 275 INGGDYVFRFYDRGVLGAGGNGGCESTELDHAITAVGYGMAGDGTGYWLMKNSWGSGWGE 334

Query: 304 GGFIRMRRDVGGAGLCGIARKASYPI 329
            G++R+RR   G G+CG+A+ ASYP+
Sbjct: 335 SGYVRIRRGSRGEGVCGLAKLASYPV 360


>gi|125533982|gb|EAY80530.1| hypothetical protein OsI_35710 [Oryza sativa Indica Group]
          Length = 378

 Score =  283 bits (725), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 147/326 (45%), Positives = 207/326 (63%), Gaps = 15/326 (4%)

Query: 19  EDSISAKHELWM--------AQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKL 70
           E+S+ A +E W         A S     +  E   RF +F +N R+I + NR G + ++L
Sbjct: 35  EESLRALYERWRSRYTVSRPAASGGVGNDDGEARRRFNVFVENARYIHEANRRGGRPFRL 94

Query: 71  SLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYP-DSRRGLPRSIDWRARGA 129
           +LN+FAD+T +EF  ++ G +          +      F Y  D    LP ++DWR RGA
Sbjct: 95  ALNKFADMTTDEFRRTYAGSRARHHRSLRGGRGGEGGSFRYGGDDEDNLPPAVDWRERGA 154

Query: 130 VTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDA 187
           VT +K+QG CG CW FSAVAAVEG+ KI+TGRL++LSEQ+++DC    ++GC GG MD A
Sbjct: 155 VTGIKDQGQCGSCWAFSAVAAVEGVNKIKTGRLVTLSEQELVDCDTGDNQGCDGGLMDYA 214

Query: 188 FSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPV 246
           F +I R+ G+T E  YPY+  +G CN  + +     I  Y+DVP + E AL+ AV+ QPV
Sbjct: 215 FQFIKRNGGITTESNYPYRAEQGRCNKAKASSHDVTIDGYEDVPANDESALQKAVANQPV 274

Query: 247 SVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGG 305
           +VA++AS   F++YS GVF G CG +L+H V  VGYG + +G  YW++KNSWG++WGE G
Sbjct: 275 AVAVEASGQDFQFYSEGVFTGECGTDLDHGVAAVGYGITRDGTKYWIVKNSWGEDWGERG 334

Query: 306 FIRMRRDVGGA--GLCGIARKASYPI 329
           +IRM+R V     GLCGIA +ASYP+
Sbjct: 335 YIRMQRGVSSDSNGLCGIAMEASYPV 360


>gi|115484973|ref|NP_001067630.1| Os11g0255300 [Oryza sativa Japonica Group]
 gi|530335|emb|CAA56844.1| cysteine protease [Oryza sativa Japonica Group]
 gi|5761322|dbj|BAA83472.1| cysteine endopeptidase [Oryza sativa Japonica Group]
 gi|62732672|gb|AAX94791.1| cysteine proteinase (EC 3.4.22.-) - rice [Oryza sativa Japonica
           Group]
 gi|62732673|gb|AAX94792.1| cysteine proteinase (EC 3.4.22.-) - rice [Oryza sativa Japonica
           Group]
 gi|62732674|gb|AAX94793.1| cysteine proteinase (EC 3.4.22.-) - rice [Oryza sativa Japonica
           Group]
 gi|77549615|gb|ABA92412.1| Thiol protease SEN102 precursor, putative, expressed [Oryza sativa
           Japonica Group]
 gi|77549616|gb|ABA92413.1| Thiol protease SEN102 precursor, putative, expressed [Oryza sativa
           Japonica Group]
 gi|77549617|gb|ABA92414.1| Thiol protease SEN102 precursor, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113644852|dbj|BAF27993.1| Os11g0255300 [Oryza sativa Japonica Group]
 gi|125576789|gb|EAZ18011.1| hypothetical protein OsJ_33558 [Oryza sativa Japonica Group]
 gi|215701098|dbj|BAG92522.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 378

 Score =  283 bits (724), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 146/326 (44%), Positives = 209/326 (64%), Gaps = 15/326 (4%)

Query: 19  EDSISAKHELWM--------AQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKL 70
           E+S+ A +E W         A S     +  E   RF +F +N R+I + NR G + ++L
Sbjct: 35  EESLRALYERWRSRYTVSRPAASGGVGNDDGEARRRFNVFVENARYIHEANRRGGRPFRL 94

Query: 71  SLNEFADLTDEEFIASHTGYKM-PTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGA 129
           +LN+FAD+T +EF  ++ G +    R++S        ++    D    LP ++DWR RGA
Sbjct: 95  ALNKFADMTTDEFRRTYAGSRARHHRSLSGGRGGEGGSFRYGGDDEDNLPPAVDWRERGA 154

Query: 130 VTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDA 187
           VT +K+QG CG CW FS VAAVEG+ KI+TGRL++LSEQ+++DC    ++GC GG MD A
Sbjct: 155 VTGIKDQGQCGSCWAFSTVAAVEGVNKIKTGRLVTLSEQELVDCDTGDNQGCDGGLMDYA 214

Query: 188 FSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPV 246
           F +I R+ G+T E  YPY+  +G CN  + +     I  Y+DVP + E AL+ AV+ QPV
Sbjct: 215 FQFIKRNGGITTESNYPYRAEQGRCNKAKASSHDVTIDGYEDVPANDESALQKAVANQPV 274

Query: 247 SVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGG 305
           +VA++AS   F++YS GVF G CG +L+H V  VGYG + +G  YW++KNSWG++WGE G
Sbjct: 275 AVAVEASGQDFQFYSEGVFTGECGTDLDHGVAAVGYGITRDGTKYWIVKNSWGEDWGERG 334

Query: 306 FIRMRRDVGGA--GLCGIARKASYPI 329
           +IRM+R V     GLCGIA +ASYP+
Sbjct: 335 YIRMQRGVSSDSNGLCGIAMEASYPV 360


>gi|18391078|ref|NP_563855.1| xylem bark cysteine peptidase 3 [Arabidopsis thaliana]
 gi|110741821|dbj|BAE98853.1| papain-like cysteine peptidase XBCP3 [Arabidopsis thaliana]
 gi|111074448|gb|ABH04597.1| At1g09850 [Arabidopsis thaliana]
 gi|332190386|gb|AEE28507.1| xylem bark cysteine peptidase 3 [Arabidopsis thaliana]
          Length = 437

 Score =  283 bits (724), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 148/316 (46%), Positives = 198/316 (62%), Gaps = 14/316 (4%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D IS   + W  +  +TY ++ E+  R +IFK N  F+ + N   N TY LSLN FADLT
Sbjct: 26  DDISELFDDWCQKHGKTYGSEEERQQRIQIFKDNHDFVTQHNLITNATYSLSLNAFADLT 85

Query: 80  DEEFIASHTGYKM--PTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQG 137
             EF AS  G  +  P+  ++++ QS   +          +P S+DWR +GAVT VK+QG
Sbjct: 86  HHEFKASRLGLSVSAPSVIMASKGQSLGGS--------VKVPDSVDWRKKGAVTNVKDQG 137

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQ 195
           SCG CW FSA  A+EGI +I TG LISLSEQ+++DC  S   GC GG MD AF ++I++ 
Sbjct: 138 SCGACWSFSATGAMEGINQIVTGDLISLSEQELIDCDKSYNAGCNGGLMDYAFEFVIKNH 197

Query: 196 GLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASS 254
           G+  E+ YPYQ R+G C   +   K   I SY  V ++ E AL  AV+ QPVSV I  S 
Sbjct: 198 GIDTEKDYPYQERDGTCKKDKLKQKVVTIDSYAGVKSNDEKALMEAVAAQPVSVGICGSE 257

Query: 255 PGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG 314
             F+ YS G+F+GPC  +L+HAV IVGYGS N   YW++KNSWG++WG  GF+ M+R+  
Sbjct: 258 RAFQLYSSGIFSGPCSTSLDHAVLIVGYGSQNGVDYWIVKNSWGKSWGMDGFMHMQRNTE 317

Query: 315 GA-GLCGIARKASYPI 329
            + G+CGI   ASYPI
Sbjct: 318 NSDGVCGINMLASYPI 333


>gi|4731374|gb|AAD28477.1|AF133839_1 papain-like cysteine protease [Sandersonia aurantiaca]
          Length = 357

 Score =  283 bits (724), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 146/316 (46%), Positives = 205/316 (64%), Gaps = 9/316 (2%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           EDS+ + +E W +  A + ++  +K  RF +FK+N +FI +FN+  + T+KL+LN+F D+
Sbjct: 31  EDSLWSLYERWRSHHAVS-RDLDQKQKRFNVFKENVKFIHEFNKNKDVTFKLALNKFGDM 89

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
           T++EF A + G K+        S+  + +   +       P SIDWR RGAV  VKNQG 
Sbjct: 90  TNQEFRAKYAGSKVHHHRTMKGSRHGSGSGAKFMYENAVAPPSIDWRERGAVAAVKNQGQ 149

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSYIIRSQG 196
           CG CW FSA+AAVEGI +I T  L+ LSEQ+++DC    ++GC GG MD AF +I  + G
Sbjct: 150 CGSCWAFSAIAAVEGINQIVTKELVPLSEQELIDCDTDQNQGCSGGLMDYAFEFIKNNGG 209

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSP 255
           +T E VYPYQ  +  C   +    A  I  Y+DVPT+ E AL  AV+ QPV+VAI+AS  
Sbjct: 210 ITTEDVYPYQAEDATC---KKNSPAVVIDGYEDVPTNDEDALMKAVANQPVAVAIEASGY 266

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVG 314
            F++YS GVF G CG  L+H V +VGYG++ +G  YW ++NSWG +WGE G++RM+R + 
Sbjct: 267 VFQFYSEGVFTGRCGTELDHGVAVVGYGTTQDGTKYWTVRNSWGADWGESGYVRMQRGIK 326

Query: 315 GA-GLCGIARKASYPI 329
              GLCGIA +ASYPI
Sbjct: 327 ATHGLCGIAMQASYPI 342


>gi|1169186|sp|P43156.1|CYSP_HEMSP RecName: Full=Thiol protease SEN102; Flags: Precursor
 gi|396568|emb|CAA52425.1| thiol-protease [Hemerocallis hybrid cultivar]
          Length = 360

 Score =  283 bits (723), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 152/344 (44%), Positives = 217/344 (63%), Gaps = 22/344 (6%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELW-MAQSARTYKNQA----EKAMRFKIFKKNFR 55
           + ++ +++ S+  S    E  ++++  LW + +  RT+   A    EK  RF +FK+N +
Sbjct: 9   LALVALSFLSIAQSIPFTEKDLASEDSLWNLYEKWRTHHTVARDLDEKNRRFNVFKENVK 68

Query: 56  FIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKM----PTRNISNQSQSYANNWFGY 111
           FI +FN++ +  YKL+LN+F D+T++EF + + G K+      R I   + S+     G 
Sbjct: 69  FIHEFNQKKDAPYKLALNKFGDMTNQEFRSKYAGSKIQHHRSQRGIQKNTGSFMYENVG- 127

Query: 112 PDSRRGLPR-SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQV 170
                 LP  SIDWRA+GAVT VK+QG CG CW FS +A+VEGI +I+TG L+SLSEQ++
Sbjct: 128 -----SLPAASIDWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSLSEQEL 182

Query: 171 LDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQ 228
           +DC  S   GC GG MD AF + I+  G+T E  YPY  ++G C           I  +Q
Sbjct: 183 VDCDTSYNEGCNGGLMDYAFEF-IQKNGITTEDSYPYAEQDGTCASNLLNSPVVSIDGHQ 241

Query: 229 DVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNE 287
           DVP  +E AL  AV+ QP+SV+I+AS  GF++YS GVF G CG  L+H V IVGYG++ +
Sbjct: 242 DVPANNENALMQAVANQPISVSIEASGYGFQFYSEGVFTGRCGTELDHGVAIVGYGATRD 301

Query: 288 G-PYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPI 329
           G  YW++KNSWG+ WGE G+IRM+R +    G CGIA +ASYPI
Sbjct: 302 GTKYWIVKNSWGEEWGESGYIRMQRGISDKRGKCGIAMEASYPI 345


>gi|34223513|gb|AAQ62999.1| oil palm polygalacturonase allergen PEST472 [Elaeis guineensis]
          Length = 525

 Score =  283 bits (723), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 153/336 (45%), Positives = 212/336 (63%), Gaps = 13/336 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           M II    A  V      E+ +   +E W+A+  R      EK  RF+IFK N RFI+  
Sbjct: 25  MSIISYDEAHGVQGLERSEEEMRLLYEGWLAKHGRADNALGEKERRFEIFKDNVRFIDAH 84

Query: 61  N---REGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQS-YANNWFGYPDSRR 116
           N     G+++++L LN FAD+T+EE+   + G    TR  S++ ++   ++ + Y ++  
Sbjct: 85  NAAADSGHRSFRLGLNRFADMTNEEYRTVYLG----TRPASHRRRARLGSDRYRY-NAGE 139

Query: 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG- 175
            LP S+DWR +GAVT VK+QGSCG CW FS +AAVEGI KI TG LISLSEQ+++DC   
Sbjct: 140 ELPESVDWRDKGAVTTVKDQGSCGSCWAFSTIAAVEGINKIVTGDLISLSEQELVDCDNG 199

Query: 176 -SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS- 233
            ++GC GG MD AF +II + G+  E  YPY+ R+G C+  R   K   I  Y+DVP + 
Sbjct: 200 QNQGCNGGLMDYAFEFIINNGGIDTEEDYPYKARDGKCDQYRKNAKVVSIDGYEDVPVND 259

Query: 234 ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLI 293
           E AL+ AV+ QPVSVAI+A    F+ Y  G+F G CG +L+H V  VGYG+ N   YW++
Sbjct: 260 EKALQKAVANQPVSVAIEAGGREFQLYHSGIFTGRCGTDLDHGVVAVGYGTENGKDYWIV 319

Query: 294 KNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYP 328
           +NSWG +WGE G+IRM R+V  + G CGIA ++SYP
Sbjct: 320 RNSWGGDWGESGYIRMERNVNASTGKCGIAMESSYP 355


>gi|255538788|ref|XP_002510459.1| cysteine protease, putative [Ricinus communis]
 gi|223551160|gb|EEF52646.1| cysteine protease, putative [Ricinus communis]
          Length = 422

 Score =  283 bits (723), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 150/333 (45%), Positives = 203/333 (60%), Gaps = 9/333 (2%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           + +I + + +L +S       IS   E W  +  +TY ++ +K  RFKIF++N+ F++K 
Sbjct: 7   LFLITLLFFNLSISSFSSSSDISKLFESWTKEHGKTYTSKEDKLYRFKIFEENYEFVKKH 66

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N +GN +Y LSLN FADLT  EF AS  G    +      S   +   F   D    +P 
Sbjct: 67  NSQGNSSYTLSLNAFADLTHHEFKASRLGLSAFS-----TSGKLSRRNFPLHDFVGDVPI 121

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRG 178
           SIDWR +GAV+ VK+QG+CG CW FSA  A+EGI KI TG L+SLSEQ+++DC  S + G
Sbjct: 122 SIDWRKKGAVSQVKDQGNCGACWSFSATGAIEGINKIVTGSLVSLSEQELVDCDRSYNNG 181

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELAL 237
           C GG MD A+ ++I + G+  E  YPYQ RE  CN ++       I  Y DVP  +E  L
Sbjct: 182 CEGGLMDYAYQFVIENNGIDTEEDYPYQAREKTCNKEKLKRHVVTIDGYTDVPQNNEKEL 241

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSW 297
             AV+ QPVSV I  S   F+ YS G+F GPC  +L+HAV IVGYGS N   YW++KNSW
Sbjct: 242 LKAVAAQPVSVGICGSERAFQLYSKGIFTGPCSTSLDHAVLIVGYGSENGVDYWIVKNSW 301

Query: 298 GQNWGEGGFIRMRRDVGGA-GLCGIARKASYPI 329
           G +WG  G++ M R+ G + GLCGI   AS+P+
Sbjct: 302 GTHWGINGYMYMLRNSGNSQGLCGINMLASFPV 334


>gi|224081756|ref|XP_002306486.1| predicted protein [Populus trichocarpa]
 gi|222855935|gb|EEE93482.1| predicted protein [Populus trichocarpa]
          Length = 352

 Score =  282 bits (722), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 149/307 (48%), Positives = 200/307 (65%), Gaps = 10/307 (3%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           W+A+  + Y    E+A RF+IFK N RFI++ N + N TYK+ L +FADLT+EE+ A   
Sbjct: 7   WLAKHGKAYNGLGEEAERFEIFKNNLRFIDEHNSQ-NHTYKVGLTKFADLTNEEYRAMFL 65

Query: 89  GYKMPTRNISNQSQSYANNW-FGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSA 147
           G +   +    +S+S +  + F   D    LP S+DWRA+GAV P+K+QGSCG CW FS 
Sbjct: 66  GTRSDAKRRLMKSKSPSERYAFKAGDK---LPESVDWRAKGAVNPIKDQGSCGSCWAFST 122

Query: 148 VAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERVYPY 205
           VAAVEGI +I TG LISLSEQ+++DC  +   GC GG MD AF +II + GL  E+ YPY
Sbjct: 123 VAAVEGINQIVTGELISLSEQELVDCDRTYNAGCNGGLMDYAFQFIINNGGLDTEKDYPY 182

Query: 206 QRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGFRYYSGGV 264
              +  C+  +   KA  I  ++DV P  E AL+ AV+ QPVSVAI+AS    ++Y  GV
Sbjct: 183 VGDDDKCDKDKMKTKAVSIDGFEDVLPYDEKALQKAVAHQPVSVAIEASGMALQFYQSGV 242

Query: 265 FAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG--AGLCGIA 322
           F G CG  L+H V +VGY S N   YWL++NSWG  WGE G+I+M+R+VG    G CGIA
Sbjct: 243 FTGECGTALDHGVVVVGYASENGLDYWLVRNSWGTEWGEHGYIKMQRNVGDTYTGRCGIA 302

Query: 323 RKASYPI 329
            ++SYP+
Sbjct: 303 MESSYPV 309


>gi|242092704|ref|XP_002436842.1| hypothetical protein SORBIDRAFT_10g009850 [Sorghum bicolor]
 gi|241915065|gb|EER88209.1| hypothetical protein SORBIDRAFT_10g009850 [Sorghum bicolor]
          Length = 296

 Score =  282 bits (722), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 144/314 (45%), Positives = 199/314 (63%), Gaps = 31/314 (9%)

Query: 24  AKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEF 83
           A+HE WM Q +R YK+  EKA RF++FK N +FIE FN  GN+ + L +N+FADLT++EF
Sbjct: 3   ARHEQWMVQYSRVYKDATEKAQRFEVFKSNVKFIESFNAGGNRKFWLGVNQFADLTNDEF 62

Query: 84  IASHT--GYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRARGAVTPVKNQGSCG 140
            A+ T  G+K     +           F Y + S   LP +IDWR +GAVTP+K+QG C 
Sbjct: 63  RATKTNKGFKPSPVKVPTG--------FRYENISVDALPATIDWRTKGAVTPIKDQGQC- 113

Query: 141 CCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGL 197
                      EGI KI TG+LISLSEQ+++DC      +GC GG MDDAF +II+  GL
Sbjct: 114 -----------EGIVKISTGKLISLSEQELVDCDVHGEDQGCEGGLMDDAFKFIIKKGGL 162

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPG 256
           T E  YPY   +G C  + G+   A ++ ++DVP + E +L  AV+ QPVSVA+D     
Sbjct: 163 TTESSYPYTAADGKC--KSGSNSVATVKGFEDVPANDEASLMKAVANQPVSVAVDGGDMT 220

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRDVGG 315
           F++YSGGV  G CG +L+H +  +GYG +++G  YWL+KNSWG  WGE G++RM +D+  
Sbjct: 221 FQFYSGGVMTGSCGTDLDHGIAAIGYGQTSDGTKYWLLKNSWGTTWGENGYLRMEKDISD 280

Query: 316 A-GLCGIARKASYP 328
             G+CG+A + SYP
Sbjct: 281 KRGMCGLAMEPSYP 294


>gi|171702841|dbj|BAG16376.1| cysteine protease [Brassica rapa var. perviridis]
          Length = 333

 Score =  282 bits (722), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 145/322 (45%), Positives = 210/322 (65%), Gaps = 11/322 (3%)

Query: 11  LVMSR-TLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNR-EGNQTY 68
           + +SR  L E ++  +H  WM +  R Y +  EK  R+ +FK+N   IE+ N  +   T+
Sbjct: 16  ITLSRPLLDEVAMQKRHAEWMTEHGRVYADANEKNNRYAVFKRNVERIERLNDVQSGLTF 75

Query: 69  KLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRAR 127
           KL++N+FADLT+EEF + +TG+K  +  +S++++  +   F Y + S   LP S+DWR +
Sbjct: 76  KLAVNQFADLTNEEFRSMYTGFKGNSV-LSSRTKPTS---FRYQNVSSDALPVSVDWRKK 131

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDD 186
           GAVTP+K+QG CG CW FSAVAA+EG+ +I+ G+LISLSEQ+++DC +   GC GG MD 
Sbjct: 132 GAVTPIKDQGLCGSCWAFSAVAAIEGVAQIKKGKLISLSEQELVDCDTNDGGCMGGLMDT 191

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQP 245
           AF+Y I   GLT E  YPY+   G CN+ +    A  I+ ++DVP + E AL  AV+  P
Sbjct: 192 AFNYTITIGGLTSESNYPYKSTNGTCNFNKTKQIATSIKGFEDVPANDEKALMKAVAHHP 251

Query: 246 VSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEG 304
           VS+ I     GF++YS GVF+G C  +L+H VT VGYG S  G  YW++KNSWG  WGE 
Sbjct: 252 VSIGIAGGDIGFQFYSSGVFSGECTTHLDHGVTAVGYGRSKNGLKYWILKNSWGPKWGER 311

Query: 305 GFIRMRRDVG-GAGLCGIARKA 325
           G++R+++D+    G CG+A  A
Sbjct: 312 GYMRIKKDIKPKHGQCGLAMNA 333


>gi|226506492|ref|NP_001140873.1| uncharacterized protein LOC100272949 precursor [Zea mays]
 gi|194701540|gb|ACF84854.1| unknown [Zea mays]
          Length = 379

 Score =  282 bits (722), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 153/344 (44%), Positives = 207/344 (60%), Gaps = 16/344 (4%)

Query: 1   MLIIMVTWASLVMSRTLH--EDSISAKHELWM-----AQSARTYKNQAEKAMRFKIFKKN 53
           + ++ V+ A++ + R +   E  +++   LW          R +++  EK  RF  FK+N
Sbjct: 11  VALVFVSSAAVELCRAIDFDERDLASDEALWDLYERWQTHHRVHRHHGEKGRRFGTFKEN 70

Query: 54  FRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPT--RNISNQSQSYANNWFGY 111
            RFI   N+ G++ Y+L LN F D+  EEF ++    ++    R  S  +++ A   F Y
Sbjct: 71  VRFIHAHNKRGDRPYRLRLNRFGDMGREEFRSTFADSRINDLRRQDSPAARAGAVPGFMY 130

Query: 112 PDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVL 171
            DS    PRS+DWR  GAVT VK QG CG CW FS V AVEGI  IRTG L SLSEQ+++
Sbjct: 131 -DSAADPPRSVDWRQEGAVTGVKVQGHCGSCWAFSTVVAVEGINAIRTGSLASLSEQELI 189

Query: 172 DC-SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRG---AMKAARIRSY 227
           DC +   GC GG M++AF +I    G+T E  YPY+   G C+  R          I  +
Sbjct: 190 DCDTDENGCQGGLMENAFEFIKSFGGITTEAAYPYRASNGTCDGDRARRGGGVVVVIDGH 249

Query: 228 QDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSN 286
           Q VP  SE AL  AV+ QPVSVA+DA    F++YS GVF G CG +L+H V  VGYG  +
Sbjct: 250 QMVPAGSEDALAKAVAHQPVSVAVDAGGQAFQFYSEGVFTGDCGTDLDHGVAAVGYGVGD 309

Query: 287 EG-PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           +G PYW++KNSWG +WGEGG+IRM+R  G  GLCGIA +AS+PI
Sbjct: 310 DGTPYWIVKNSWGTSWGEGGYIRMQRGAGNGGLCGIAMEASFPI 353


>gi|302759380|ref|XP_002963113.1| hypothetical protein SELMODRAFT_270344 [Selaginella moellendorffii]
 gi|300169974|gb|EFJ36576.1| hypothetical protein SELMODRAFT_270344 [Selaginella moellendorffii]
          Length = 479

 Score =  282 bits (721), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 155/322 (48%), Positives = 197/322 (61%), Gaps = 17/322 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQA--------EKAMRFKIFKKNFRFIEKFNREGNQTYKL 70
           E+ + A  + WM Q  ++Y   A        EKA R+ IFK N RFI   N E NQ Y L
Sbjct: 50  EERLQALFDSWMLQHGKSYAENALSGDSQAGEKATRYGIFKDNLRFIHGEN-EKNQGYFL 108

Query: 71  SLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAV 130
            LN FADLT+EEF A   G +    + S +  SY    +G     + LP SIDWR +GAV
Sbjct: 109 GLNAFADLTNEEFRAQRHGGRF---DRSRERTSYEEFRYGSV-QLKDLPDSIDWREKGAV 164

Query: 131 TPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAF 188
             VK+QGSCG CW FSAVAA+EG+ K+ TG L+SLSEQ+++DC      GC GG MD AF
Sbjct: 165 VGVKDQGSCGSCWAFSAVAAIEGVNKLATGELVSLSEQELVDCDKGEDEGCNGGLMDYAF 224

Query: 189 SYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVS 247
            ++I++ GL  E  YPY+     C+  +   K   I  Y+DVP + E AL  AV+ QPVS
Sbjct: 225 GFVIKNGGLDTEADYPYKGYGTRCDRSKMNAKVVTIDGYEDVPVNDETALLKAVAHQPVS 284

Query: 248 VAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFI 307
           VAIDA     ++Y  G+F G CG +L+H VT VGYG  +   YW+IKNSWG NWGE G+I
Sbjct: 285 VAIDAGGSSMQFYRSGIFTGRCGTDLDHGVTNVGYGKEDGKAYWIIKNSWGSNWGEKGYI 344

Query: 308 RMRRDVG-GAGLCGIARKASYP 328
           +M R+ G  AGLCGI  +ASYP
Sbjct: 345 KMARNTGLAAGLCGINMEASYP 366


>gi|297852302|ref|XP_002894032.1| F2G19.31/F2G19.31 [Arabidopsis lyrata subsp. lyrata]
 gi|297339874|gb|EFH70291.1| F2G19.31/F2G19.31 [Arabidopsis lyrata subsp. lyrata]
          Length = 455

 Score =  282 bits (721), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 145/312 (46%), Positives = 202/312 (64%), Gaps = 17/312 (5%)

Query: 26  HELWMAQ--SARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEF 83
           +E W+ +   A+   +  EK  RF+IFK N RFI+  N++ N +Y+L L  FADLT++E+
Sbjct: 43  YEAWLVKHGKAQNQNSLVEKDRRFEIFKDNLRFIDDHNKK-NLSYRLGLTRFADLTNDEY 101

Query: 84  IASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG--LPRSIDWRARGAVTPVKNQGSCGC 141
            + + G KM  +     SQ Y        ++R G  LP SIDWR +GAV  VK+QGSCG 
Sbjct: 102 RSKYLGAKMEKKGERRTSQRY--------EARVGDELPESIDWRKKGAVAEVKDQGSCGS 153

Query: 142 CWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTD 199
           CW FS + AVEGI +I TG LI+LSEQ+++DC  S   GC GG MD AF +II++ G+  
Sbjct: 154 CWAFSTIGAVEGINQIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDT 213

Query: 200 ERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFR 258
           ++ YPY+  +G C+  R   K   I SY+DVPT SE +L+ AV+ QPVSVAI+A    F+
Sbjct: 214 DKDYPYKGVDGTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPVSVAIEAGGRAFQ 273

Query: 259 YYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG-GAG 317
            Y  G+F G CG  L+H V  VGYG+ N   YW+++NSWG++WGE G+++M R++   +G
Sbjct: 274 LYDSGIFDGTCGTQLDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGYLKMARNIASSSG 333

Query: 318 LCGIARKASYPI 329
            CGIA + SYPI
Sbjct: 334 KCGIAIEPSYPI 345


>gi|14600257|gb|AAK71314.1|AF388175_1 papain-like cysteine peptidase XBCP3 [Arabidopsis thaliana]
          Length = 437

 Score =  282 bits (721), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 148/316 (46%), Positives = 198/316 (62%), Gaps = 14/316 (4%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D IS   + W  +  +TY ++ E+  R +IFK N  F+ + N   N TY LSLN FADLT
Sbjct: 26  DDISELFDDWCQKHGKTYGSEEERQQRIQIFKDNHDFVTQHNLITNATYSLSLNAFADLT 85

Query: 80  DEEFIASHTGYKM--PTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQG 137
             EF AS  G  +  P+  ++++ QS   +          +P S+DWR +GAVT VK+QG
Sbjct: 86  HHEFKASRLGLSVSAPSVIMASKGQSLGGS--------VKVPDSVDWRKKGAVTNVKDQG 137

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQ 195
           SCG CW FSA  A+EGI +I TG LISLSEQ+++DC  S   GC GG MD AF ++I++ 
Sbjct: 138 SCGACWSFSATGAMEGINQIVTGDLISLSEQELIDCDKSYNAGCNGGLMDYAFEFVIKNH 197

Query: 196 GLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASS 254
           G+  E+ YPYQ R+G C   +   K   I SY  V ++ E AL  AV+ QPVSV I  S 
Sbjct: 198 GIDTEKDYPYQERDGTCKKDKLKQKVVTIDSYAGVKSNDEKALMEAVAAQPVSVGICGSE 257

Query: 255 PGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG 314
             F+ YS G+F+GPC  +L+HAV IVGYGS N   YW++KNSWG++WG  GF+ M+R+  
Sbjct: 258 RAFQLYSRGIFSGPCSTSLDHAVLIVGYGSQNGVDYWIVKNSWGKSWGMDGFMHMQRNTE 317

Query: 315 GA-GLCGIARKASYPI 329
            + G+CGI   ASYPI
Sbjct: 318 NSDGVCGINMLASYPI 333


>gi|18402225|ref|NP_566633.1| Granulin repeat cysteine protease family protein [Arabidopsis
           thaliana]
 gi|11994461|dbj|BAB02463.1| cysteine proteinase [Arabidopsis thaliana]
 gi|17065298|gb|AAL32803.1| cysteine proteinase [Arabidopsis thaliana]
 gi|20260004|gb|AAM13349.1| cysteine proteinase [Arabidopsis thaliana]
 gi|332642713|gb|AEE76234.1| Granulin repeat cysteine protease family protein [Arabidopsis
           thaliana]
          Length = 452

 Score =  281 bits (720), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 143/334 (42%), Positives = 209/334 (62%), Gaps = 12/334 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAK-HELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           +L+I ++  S+  + T   ++ + + +E W+ ++ + Y    EK  RF+IFK N +F+E+
Sbjct: 17  VLLISLSLGSVTATETTRNEAEARRMYERWLVENRKNYNGLGEKERRFEIFKDNLKFVEE 76

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLP 119
            +   N+TY++ L  FADLT++EF A +   KM    +  + + Y    +   DS   LP
Sbjct: 77  HSSIPNRTYEVGLTRFADLTNDEFRAIYLRSKMERTRVPVKGEKY---LYKVGDS---LP 130

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--R 177
            +IDWRA+GAV PVK+QGSCG CW FSA+ AVEGI +I+TG LISLSEQ+++DC  S   
Sbjct: 131 DAIDWRAKGAVNPVKDQGSCGSCWAFSAIGAVEGINQIKTGELISLSEQELVDCDTSYND 190

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRRE-GYCNWQRGAMKAARIRSYQDVP-TSEL 235
           GC GG MD AF +II + G+  E  YPY   +   CN  +   +   I  Y+DVP   E 
Sbjct: 191 GCGGGLMDYAFKFIIENGGIDTEEDYPYIATDVNVCNSDKKNTRVVTIDGYEDVPQNDEK 250

Query: 236 ALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKN 295
           +L+ A++ QP+SVAI+A    F+ Y+ GVF G CG +L+H V  VGYGS     YW+++N
Sbjct: 251 SLKKALANQPISVAIEAGGRAFQLYTSGVFTGTCGTSLDHGVVAVGYGSEGGQDYWIVRN 310

Query: 296 SWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYP 328
           SWG NWGE G+ ++ R++   +G CG+A  ASYP
Sbjct: 311 SWGSNWGESGYFKLERNIKESSGKCGVAMMASYP 344


>gi|30141021|dbj|BAC75924.1| cysteine protease-2 [Helianthus annuus]
          Length = 362

 Score =  281 bits (720), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 146/324 (45%), Positives = 198/324 (61%), Gaps = 10/324 (3%)

Query: 14  SRTLHEDSISAKHELWMAQSARTYK---NQAEKAMRFKIFKKNFRFIEKFNREGNQTYKL 70
           S   HE  +  +  LW       +K   N  EK  RF +FK N   + + N+  ++ YKL
Sbjct: 22  SFDFHEKELETEDNLWDMYERWRHKVATNHGEKLRRFNVFKSNVLHVHETNKM-DKPYKL 80

Query: 71  SLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAV 130
            LN+FAD+T+ EF + + G K+   + S Q     +  F Y +    +P S+DWR +GAV
Sbjct: 81  KLNKFADMTNHEFRSVYAGSKIHHHDRSLQGDRSGSKTFMYANVE-SVPTSVDWRKKGAV 139

Query: 131 TPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAF 188
            PVK+QG CG CW FS VAAVEGI KI+T  L+SLSEQ+++DC    ++GC GG MD AF
Sbjct: 140 APVKDQGQCGSCWAFSTVAAVEGINKIKTNELVSLSEQELVDCDTLENQGCNGGLMDLAF 199

Query: 189 SYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVS 247
            +I ++ GLT E  YPY   +G C+  +       I  ++DVP   E +L  AV+ QPV+
Sbjct: 200 DFIKKTGGLTREDAYPYAAEDGKCDSNKMNSPVVSIDGHEDVPKNDEQSLMKAVANQPVA 259

Query: 248 VAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGF 306
           VAIDA S  F++YS GVF G CG  L+H V  VGYG++ +G  YW+++NSWG  WGE G+
Sbjct: 260 VAIDAGSSDFQFYSEGVFTGKCGTQLDHGVAAVGYGTTLDGTKYWIVRNSWGSEWGEKGY 319

Query: 307 IRMRRDVGGA-GLCGIARKASYPI 329
           IRM R +    GLCGIA +ASYPI
Sbjct: 320 IRMERGISDKRGLCGIAMEASYPI 343


>gi|1256830|gb|AAB68374.1| cysteine endopeptidase 1 [Phaseolus vulgaris]
 gi|2959418|emb|CAA12118.1| cysteine protease [Phaseolus vulgaris]
          Length = 364

 Score =  281 bits (720), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 145/340 (42%), Positives = 202/340 (59%), Gaps = 18/340 (5%)

Query: 1   MLIIMVTWASLVMSRTLH--EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIE 58
           +L++  T++       ++  E+ +   +E W+ +  + Y    EK  RF++FK N  FI+
Sbjct: 9   LLLLSFTFSHATAMSIINYSENEVMDMYEEWLVKHRKVYNGLDEKEKRFQVFKDNLGFIQ 68

Query: 59  KFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTR----NISNQSQSYANNWFGYPDS 114
             N + N TY L LN+FAD+T++E+ A + G +   +       N    YA N      S
Sbjct: 69  DHNAQ-NNTYTLGLNKFADITNKEYRAMYLGTRTDAKRRVMKTQNTGHRYAYN------S 121

Query: 115 RRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS 174
              LP  +DWR +GAV P+K+QG+CG CW FS VAAVEGI  I TG  +SLSEQ+++DC 
Sbjct: 122 GDQLPVHVDWRLKGAVGPIKDQGNCGSCWAFSTVAAVEGINNIVTGEFVSLSEQELVDCD 181

Query: 175 G--SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT 232
                GC GG MD AF +II++ G+  E  YPYQ  +G C+  +   K  +I  Y+DVP+
Sbjct: 182 REYDEGCNGGLMDYAFQFIIQNGGIDTEEDYPYQGIDGTCDETKKKTKVVQIDGYEDVPS 241

Query: 233 S-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYW 291
           + E AL+ AVS QPVSVAI+AS    + Y  GVF G CG  L+H V +VGYG+ N   YW
Sbjct: 242 NNENALKKAVSHQPVSVAIEASGRALQLYQSGVFTGKCGTALDHGVVVVGYGTENGVDYW 301

Query: 292 LIKNSWGQNWGEGGFIRMRRDV--GGAGLCGIARKASYPI 329
           L++NSWG  WGE G+ +M R+V     G CGIA   SYP+
Sbjct: 302 LVRNSWGTGWGEDGYFKMERNVRSTSEGKCGIAMDCSYPV 341


>gi|242081867|ref|XP_002445702.1| hypothetical protein SORBIDRAFT_07g024430 [Sorghum bicolor]
 gi|241942052|gb|EES15197.1| hypothetical protein SORBIDRAFT_07g024430 [Sorghum bicolor]
          Length = 372

 Score =  281 bits (720), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 150/316 (47%), Positives = 202/316 (63%), Gaps = 10/316 (3%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           E+++ A +E W  + A   ++  +KA RF +FK+N R I  FN+  ++ YKL LN F D+
Sbjct: 40  EEALWALYERWRGRHA-VARDLGDKARRFNVFKENVRLIHDFNQR-DEPYKLRLNRFGDM 97

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
           T +EF   + G ++    +    +  + + F Y  +R  LP S+DWR +GAVT VK+QG 
Sbjct: 98  TADEFRRHYAGSRVAHHRMFRGDRQGSASSFMYAGAR-DLPTSVDWRQKGAVTDVKDQGQ 156

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYIIRSQG 196
           CG CW FS +AAVEGI  I+T  L SLSEQQ++DC   G+ GC GG MD AF YI +  G
Sbjct: 157 CGSCWAFSTIAAVEGINAIKTKNLTSLSEQQLVDCDTKGNAGCDGGLMDYAFQYIAKHGG 216

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSP 255
           +  E  YPY+ R+  C  ++    A  I  Y+DVP + E AL+ AV+ QPVSVAI+AS  
Sbjct: 217 VAAEDAYPYKARQASC--KKSPAPAVTIDGYEDVPANDESALKKAVAHQPVSVAIEASGS 274

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVG 314
            F++YS GVFAG CG  L+H VT VGYG + +G  YW++KNSWG  WGE G+IRM RDV 
Sbjct: 275 HFQFYSEGVFAGRCGTELDHGVTAVGYGVAADGTKYWVVKNSWGPEWGEKGYIRMARDVA 334

Query: 315 G-AGLCGIARKASYPI 329
              G CGIA +ASYP+
Sbjct: 335 AKEGHCGIAMEASYPV 350


>gi|255646767|gb|ACU23856.1| unknown [Glycine max]
          Length = 350

 Score =  281 bits (719), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 149/313 (47%), Positives = 200/313 (63%), Gaps = 12/313 (3%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +    E WM++  + Y+N  EK +RF+IFK N + I++ N+  +  Y L L+EFADL+
Sbjct: 42  DKLIELFESWMSRHGKIYENIEEKLLRFEIFKDNLKHIDERNKVVS-NYWLGLSEFADLS 100

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
             EF   + G K+   + S + +S     F Y D    LP+S+DWR +GAV PVKNQGSC
Sbjct: 101 HREFNNKYLGLKV---DYSRRRESPEE--FTYKDVE--LPKSVDWRKKGAVAPVKNQGSC 153

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGL 197
           G CW FS VAAVEGI +I TG L SLSEQ+++DC  +   GC GG MD AFS+I+ + GL
Sbjct: 154 GSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDRTYNNGCNGGLMDYAFSFIVENGGL 213

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPG 256
             E  YPY   EG C   +   +   I  Y DVP  +E +L  A++ QP+SVAI+AS   
Sbjct: 214 HKEEDYPYIMEEGACEMTKEETQVVTISGYHDVPQNNEQSLLKALANQPLSVAIEASGRD 273

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG- 315
           F++YSGGVF G CG++L+H V  VGYG++    Y  +KNSWG  WGE G+IRMRR++G  
Sbjct: 274 FQFYSGGVFDGHCGSDLDHGVAAVGYGTAKGVDYITVKNSWGSKWGEKGYIRMRRNIGKP 333

Query: 316 AGLCGIARKASYP 328
            G+CGI + ASYP
Sbjct: 334 EGICGIYKMASYP 346


>gi|388519351|gb|AFK47737.1| unknown [Medicago truncatula]
          Length = 359

 Score =  281 bits (719), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 143/335 (42%), Positives = 203/335 (60%), Gaps = 8/335 (2%)

Query: 1   MLIIMVTWASLVMSRTLH-EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           +L   +   SL M  ++   + +   +E W+ +  + Y    EK  RF+IFK N  FI++
Sbjct: 9   LLFFSLITLSLAMDTSMRSNEEVMTMYEEWLVKHHKVYNGLGEKDQRFEIFKDNLGFIDE 68

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLP 119
            N + N TYK+ LN+FAD T+EE+   + G K   +    + +    + + +    R LP
Sbjct: 69  HNAQ-NYTYKVGLNKFADTTNEEYRNMYLGTKNDAKRNVMKIKITTGHRYAFNSGDR-LP 126

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSR 177
             +DWR++GAV  +K+QGSCG CW FS +A VE I KI TG+L+SLSEQ+++DC  + + 
Sbjct: 127 VHVDWRSKGAVAHIKDQGSCGSCWAFSTIATVEAINKIVTGKLVSLSEQELVDCDRAFNE 186

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GG MD AF +I+ + G+  E+ YPY+  EG C+  R   K   I  Y+DVP  +E A
Sbjct: 187 GCNGGLMDYAFEFIVENGGIDTEQDYPYKGFEGRCDPTRKNAKVVSIDGYEDVPAYNENA 246

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNS 296
           L+ AV  QPVSVAI+A     + Y  GVF G CG NL+H V +VGYG  N   YWL++NS
Sbjct: 247 LKKAVFHQPVSVAIEAGGRALQLYQSGVFTGRCGTNLDHGVVVVGYGFENGVDYWLVRNS 306

Query: 297 WGQNWGEGGFIRMRRDVG--GAGLCGIARKASYPI 329
           WG NWGE G+ ++ R+V     G CGIA +ASYP+
Sbjct: 307 WGTNWGEDGYFKLERNVKKINTGKCGIAMQASYPV 341


>gi|182375363|gb|ACB87490.1| mucunain [Mucuna pruriens]
          Length = 422

 Score =  281 bits (719), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 150/313 (47%), Positives = 195/313 (62%), Gaps = 16/313 (5%)

Query: 26  HELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIA 85
           +E W+ +  + Y    EK  RF IFK N RFI+  N + N+TYKL LN FADLT+EE+ A
Sbjct: 4   YEQWLVKHGKAYNALGEKDKRFDIFKDNLRFIDDHNAD-NRTYKLGLNRFADLTNEEYRA 62

Query: 86  SHTGYKM-PTR---NISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGC 141
            + G ++ P R       QS  YA      P     LP S+DWR   AV PVK+QG+CG 
Sbjct: 63  RYLGTRIDPNRRFVKTKTQSNRYA------PRVGDNLPESVDWRNESAVLPVKDQGNCGS 116

Query: 142 CWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTD 199
           CW FS + AVEGI KI TG LISLSEQ+++DC  S  +GC GG MD A+ +II + G+  
Sbjct: 117 CWAFSTIGAVEGINKIVTGDLISLSEQELVDCDTSYNQGCNGGLMDYAYEFIINNGGIDS 176

Query: 200 ERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFR 258
           E  YPY+  +G C+  R   K   I SY+DVP + ELAL+ AV+ QPVSVAI+     F+
Sbjct: 177 EEDYPYRAVDGTCDQYRKNAKVVTIDSYEDVPANDELALKKAVANQPVSVAIEGGGREFQ 236

Query: 259 YYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG--A 316
            Y  GVF G CG  L+H V  VGYGS     YW+++NSWG +WGE G++R+ R++    +
Sbjct: 237 LYVSGVFTGRCGTALDHGVVAVGYGSVKGHDYWIVRNSWGASWGEEGYVRLERNLAKSRS 296

Query: 317 GLCGIARKASYPI 329
           G CGIA + SYPI
Sbjct: 297 GKCGIAIEPSYPI 309


>gi|115441717|ref|NP_001045138.1| Os01g0907600 [Oryza sativa Japonica Group]
 gi|5761329|dbj|BAA83473.1| cysteine endopeptidase [Oryza sativa]
 gi|20804884|dbj|BAB92565.1| cysteine endopeptidase [Oryza sativa Japonica Group]
 gi|56785107|dbj|BAD82745.1| putative cysteine proteinase [Oryza sativa Japonica Group]
 gi|113534669|dbj|BAF07052.1| Os01g0907600 [Oryza sativa Japonica Group]
 gi|119395242|gb|ABL74582.1| cysteine endopeptidase [Oryza sativa Japonica Group]
 gi|125528777|gb|EAY76891.1| hypothetical protein OsI_04850 [Oryza sativa Indica Group]
 gi|125573036|gb|EAZ14551.1| hypothetical protein OsJ_04473 [Oryza sativa Japonica Group]
          Length = 371

 Score =  281 bits (719), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 151/303 (49%), Positives = 197/303 (65%), Gaps = 18/303 (5%)

Query: 38  KNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNI 97
           ++  EK  RF  FK N R+I + N+ G + Y+L LN F D+  EEF A+  G      N 
Sbjct: 57  RHHGEKHRRFGAFKDNVRYIHEHNKRGGRGYRLRLNRFGDMGREEFRATFAGSHA---ND 113

Query: 98  SNQSQSYANNWFGYP-DSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITK 156
             +    A    G+  +  R LPR++DWR +GAVT VK+QG CG CW FS V +VEGI  
Sbjct: 114 LRRDGLAAPPLPGFMYEGVRDLPRAVDWRRKGAVTGVKDQGKCGSCWAFSTVVSVEGINA 173

Query: 157 IRTGRLISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNW 214
           IRTGRL+SLSEQ+++DC  + + GC GG M++AF YI  S G+T E  YPY+   G C+ 
Sbjct: 174 IRTGRLVSLSEQELIDCDTADNSGCQGGLMENAFEYIKHSGGITTESAYPYRAANGTCD- 232

Query: 215 QRGAMKAAR-----IRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGP 268
              A++A R     I  +Q+VP  SE AL  AV+ QPVSVAIDA    F++YS GVFAG 
Sbjct: 233 ---AVRARRAPLVVIDGHQNVPANSEAALAKAVANQPVSVAIDAGDQSFQFYSDGVFAGD 289

Query: 269 CGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVG-GAGLCGIARKAS 326
           CG +L+H V +VGYG +N+G  YW++KNSWG  WGEGG+IRM+RD G   GLCGIA +AS
Sbjct: 290 CGTDLDHGVAVVGYGETNDGTEYWIVKNSWGTAWGEGGYIRMQRDSGYDGGLCGIAMEAS 349

Query: 327 YPI 329
           YP+
Sbjct: 350 YPV 352


>gi|242077600|ref|XP_002448736.1| hypothetical protein SORBIDRAFT_06g032320 [Sorghum bicolor]
 gi|241939919|gb|EES13064.1| hypothetical protein SORBIDRAFT_06g032320 [Sorghum bicolor]
          Length = 467

 Score =  281 bits (719), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 141/317 (44%), Positives = 198/317 (62%), Gaps = 12/317 (3%)

Query: 19  EDSISAKHELWMAQSARTYKN-QAEKAMRFKIFKKNFRFIEKFN-REGNQTYKLSLNEFA 76
           E  + A +ELW+ +  R   N   E   RF++F  N RF++  N R G   ++L +N+FA
Sbjct: 49  EAEVRAMYELWLVEHGRRVSNVLGEHDSRFRVFWDNLRFVDAHNERAGEHGFRLGMNQFA 108

Query: 77  DLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQ 136
           DLT++EF A++ G ++P     N       +     D    LP S+DWR +GAV PVKNQ
Sbjct: 109 DLTNDEFRAAYLGARIPAARSGNAVGEMYRH-----DGAEELPESVDWREKGAVAPVKNQ 163

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIR 193
           G CG CW FSAV++VE I +I TG +++LSEQ++++CS   G+ GC GG MD AF++II+
Sbjct: 164 GQCGSCWAFSAVSSVESINQIVTGEMVTLSEQELVECSTDGGNSGCNGGLMDAAFNFIIK 223

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDA 252
           + G+  E  YPY+  +G C+  R   K   I +++DVP   E +L+ AV+ QPVSVAI+A
Sbjct: 224 NGGIDTEDDYPYKAVDGKCDINRRNAKVVSIDAFEDVPENDEKSLQKAVAHQPVSVAIEA 283

Query: 253 SSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRD 312
               F+ Y  GVF+G C  NL+H V  VGYG+ N   YW+++NSWG  WGE G+IRM R+
Sbjct: 284 GGRQFQLYKSGVFSGSCTTNLDHGVVAVGYGTENGKDYWIVRNSWGPKWGEAGYIRMERN 343

Query: 313 VGG-AGLCGIARKASYP 328
           +    G CGIA  ASYP
Sbjct: 344 INATTGKCGIAMMASYP 360


>gi|537437|gb|AAC35211.1| cysteine proteinase [Hemerocallis hybrid cultivar]
          Length = 359

 Score =  281 bits (718), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 149/345 (43%), Positives = 217/345 (62%), Gaps = 25/345 (7%)

Query: 1   MLIIMVTWASLVMSRTL--------HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKK 52
           +L +++   S+ +++++         E+S+ + +E W A  A + ++  +   RF +FK+
Sbjct: 8   LLSVVLVLGSVALAQSIPFDEKDLASEESLWSLYEKWRAHHAVS-RDLDDTDKRFNVFKE 66

Query: 53  NFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYK----MPTRNISNQSQSYANNW 108
           N +FI +FN++ + TYKL+LN+F D+T++EF +++ G K    M  R + +  +      
Sbjct: 67  NVKFIHEFNQKKDATYKLALNKFGDMTNQEFRSTYAGSKIDHHMTLRGVKDAGE------ 120

Query: 109 FGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQ 168
           F Y +    LP S+DWR +GAVT VK+QG CG CW FS V AVEGI +I+T  L+SLSEQ
Sbjct: 121 FSY-EKFHDLPTSVDWREKGAVTGVKDQGQCGSCWAFSTVVAVEGINQIKTNELVSLSEQ 179

Query: 169 QVLDC-SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSY 227
           Q++DC + + GC GG MD AF +I  + GL+ E  YPY   +  C  +  +     I  Y
Sbjct: 180 QLVDCDTKNSGCNGGLMDYAFDFIKNNGGLSSEDSYPYLAEQKSCGSEANSA-VVTIDGY 238

Query: 228 QDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSN 286
           QDVP  +E AL  AV+ QPVSVAI+AS   F++YS GVF+G CG  L+H V  VGYG  +
Sbjct: 239 QDVPRNNEAALMKAVANQPVSVAIEASGYAFQFYSQGVFSGHCGTELDHGVAAVGYGVDD 298

Query: 287 EG-PYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPI 329
           +G  YW++KNSWG+ WGE G+IRM R +    G CGIA +ASYPI
Sbjct: 299 DGKKYWIVKNSWGEGWGESGYIRMERGIKDKRGKCGIAMEASYPI 343


>gi|374713649|gb|AEZ65082.1| cysteine protease [Carica papaya]
          Length = 471

 Score =  281 bits (718), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 148/327 (45%), Positives = 198/327 (60%), Gaps = 11/327 (3%)

Query: 9   ASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTY 68
           A  + S    E  +   +E W+ +  + Y    EK  RF+IFK N RF+++ N    +TY
Sbjct: 35  ADPLQSTERTEAHMMKMYEHWLVKHGKNYNAIGEKERRFEIFKDNLRFVDEQNSVPGRTY 94

Query: 69  KLSLNEFADLTDEEFIASHTGYKMPTRNI--SNQSQSYANNWFGYPDSRRGLPRSIDWRA 126
           KL L +FADLT+EE+ A + G KM  +    + +SQ Y +      D    LP  +DWR 
Sbjct: 95  KLGLTKFADLTNEEYRAMYLGAKMEKKEKLRTERSQRYLHKAGNDDD----LPSHVDWRE 150

Query: 127 RGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWM 184
           +GAVT VK+QG CG CW FS V +VEGI +I TG LISLSEQ+++DC  +  +GC GG M
Sbjct: 151 KGAVTEVKDQGQCGSCWAFSTVGSVEGINQIVTGDLISLSEQELVDCDKAYNQGCNGGLM 210

Query: 185 DDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSR 243
           D AF +II++ G+  E  YPY+  +  C+  R       I  Y+DVP   E +L+ AV+ 
Sbjct: 211 DYAFEFIIKNGGIDSEADYPYRASDNMCDSNRKNAHVVTIDGYEDVPENDEESLKKAVAN 270

Query: 244 QPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGE 303
           QPVSVAI+A    F+ Y  GVF G CG NL+H V  VGYG+ N   YW+++NSWG  WGE
Sbjct: 271 QPVSVAIEAGGREFQLYQSGVFTGRCGTNLDHGVVAVGYGTENGIDYWIVRNSWGPKWGE 330

Query: 304 GGFIRMRRDVGG--AGLCGIARKASYP 328
            G+IRM R+V     G CGIA +ASYP
Sbjct: 331 SGYIRMERNVASTDTGKCGIAMEASYP 357


>gi|226507950|ref|NP_001151278.1| LOC100284911 precursor [Zea mays]
 gi|195645488|gb|ACG42212.1| vignain precursor [Zea mays]
          Length = 376

 Score =  281 bits (718), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 151/318 (47%), Positives = 203/318 (63%), Gaps = 12/318 (3%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           E+++ A +E W  + A   ++  +KA RF +FK N R I +FNR  ++ YKL LN F D+
Sbjct: 42  EEALWALYERWRGRHALA-RDLGDKARRFNVFKANVRLIHEFNRR-DEPYKLRLNRFGDM 99

Query: 79  TDEEFIASHTGYKMPTRNI--SNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQ 136
           T +EF   + G ++    +   ++  S A+  F Y D+R  +P S+DWR +GAVT VK+Q
Sbjct: 100 TADEFRRHYAGSRVAHHRMFRGDRQGSSASASFMYADAR-DVPASVDWRQKGAVTDVKDQ 158

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYIIRS 194
           G CG CW FS +AAVEGI  I+T  L SLSEQQ++DC    + GC GG MD AF YI + 
Sbjct: 159 GQCGSCWAFSTIAAVEGINAIKTKNLTSLSEQQLVDCDTKANAGCNGGLMDYAFQYIAKH 218

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDAS 253
            G+  E  YPY+ R+  C  ++       I  Y+DVP + E AL+ AV+ QPVSVAI+AS
Sbjct: 219 GGVAAEDAYPYRARQASC--KKSPAPVVTIDGYEDVPANDESALKKAVAHQPVSVAIEAS 276

Query: 254 SPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRD 312
              F++YS GVF+G CG  L+H VT VGYG + +G  YWL+KNSWG  WGE G+IRM RD
Sbjct: 277 GSHFQFYSEGVFSGRCGTELDHGVTAVGYGVTADGTKYWLVKNSWGPEWGEKGYIRMARD 336

Query: 313 VGG-AGLCGIARKASYPI 329
           V    G CGIA +ASYP+
Sbjct: 337 VAAKEGHCGIAMEASYPV 354


>gi|238006338|gb|ACR34204.1| unknown [Zea mays]
          Length = 465

 Score =  281 bits (718), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 138/309 (44%), Positives = 195/309 (63%), Gaps = 9/309 (2%)

Query: 26  HELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN-REGNQTYKLSLNEFADLTDEEFI 84
           +ELW+A+  R Y    E+  RF++F  N RF++  N R     ++L +N+FADLT++EF 
Sbjct: 52  YELWLAEHGRAYNALGERDRRFRVFWDNLRFVDAHNERAAEHGFRLGMNQFADLTNDEFR 111

Query: 85  ASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWI 144
           A++ G ++P    S +  +     + +      LP S+DWR +GAV PVKNQG CG CW 
Sbjct: 112 AAYLGARIPA---SRRRGTAVGERYRHGGGAEELPESVDWREKGAVAPVKNQGQCGSCWA 168

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDER 201
           FSAV++VE + +I TG +++LSEQ++++CS   G+ GC GG MD AF +II++ G+  E 
Sbjct: 169 FSAVSSVESVNQIVTGEMVTLSEQELVECSTDGGNSGCNGGLMDAAFDFIIKNGGIDTEG 228

Query: 202 VYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYY 260
            YPY+  +G C+  R   K   I  ++DVP   E +L+ AV+ QPVSVAI+A    F+ Y
Sbjct: 229 DYPYKAVDGKCDINRENAKVVSIDGFEDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLY 288

Query: 261 SGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLC 319
             GVF G C  NL+H V  VGYG+ N   YW+++NSWG  WGE G+IRM R+V    G C
Sbjct: 289 KAGVFTGTCTTNLDHGVVAVGYGTENGKDYWIVRNSWGAKWGEDGYIRMERNVNATTGKC 348

Query: 320 GIARKASYP 328
           GIA  ASYP
Sbjct: 349 GIAMMASYP 357


>gi|242055323|ref|XP_002456807.1| hypothetical protein SORBIDRAFT_03g043220 [Sorghum bicolor]
 gi|241928782|gb|EES01927.1| hypothetical protein SORBIDRAFT_03g043220 [Sorghum bicolor]
          Length = 369

 Score =  281 bits (718), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 151/340 (44%), Positives = 207/340 (60%), Gaps = 12/340 (3%)

Query: 1   MLIIMVTWASLVMSRTLH--EDSISAKHELWM-----AQSARTYKNQAEKAMRFKIFKKN 53
           +L+ +V  +++ + R +   E  +++   LW            +++  EK  RF  FK+N
Sbjct: 9   LLVALVAMSAVELCRAIEFDERDLASDEALWDLYERWQTHHHVHRHHGEKGRRFGTFKEN 68

Query: 54  FRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD 113
            RFI   N+ G++ Y+LSLN F D+  EEF ++    ++     +    + A   F Y D
Sbjct: 69  VRFIHAHNKRGDRPYRLSLNRFGDMGREEFRSTFADSRINDLRRAESPAAPAVPGFMY-D 127

Query: 114 SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
               LP S+DWR  GAVT VK+QG CG CW FS V +VEGI  IRTG L+SLSEQ+++DC
Sbjct: 128 GVTDLPPSVDWRKEGAVTAVKDQGHCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDC 187

Query: 174 -SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAM-KAARIRSYQDVP 231
            +   GC GG M++AF +I    G+T E  YPY+   G C+  R    +   I  +Q VP
Sbjct: 188 DTDENGCQGGLMENAFEFIKSYGGVTTESAYPYRASNGTCDSVRSRRGQIVSIDGHQMVP 247

Query: 232 T-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-P 289
           T SE AL  AV+ QPVSVAIDA    F++YS GVF G CG +L+H V  VGYG S++G  
Sbjct: 248 TGSEDALAKAVANQPVSVAIDAGGQAFQFYSEGVFTGDCGTDLDHGVAAVGYGVSDDGTA 307

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           YW++KNSWG +WGEGG+IRM+R  G  GLCGIA +AS+PI
Sbjct: 308 YWIVKNSWGPSWGEGGYIRMQRGAGNGGLCGIAMEASFPI 347


>gi|302796898|ref|XP_002980210.1| hypothetical protein SELMODRAFT_153766 [Selaginella moellendorffii]
 gi|300151826|gb|EFJ18470.1| hypothetical protein SELMODRAFT_153766 [Selaginella moellendorffii]
          Length = 479

 Score =  281 bits (718), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 153/323 (47%), Positives = 198/323 (61%), Gaps = 17/323 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQA--------EKAMRFKIFKKNFRFIEKFNREGNQTYKL 70
           E+ + A  + WM Q  ++Y + A        EKA R+ IFK N RFI   N E NQ Y L
Sbjct: 50  EERLQALFDSWMLQHGKSYADNALSGDSQAGEKATRYGIFKDNLRFIHGEN-EKNQGYFL 108

Query: 71  SLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAV 130
            LN FADLT+EEF A   G +    + S +  S+    +G     + LP SIDWR +GAV
Sbjct: 109 GLNAFADLTNEEFRAQRHGGRF---DRSRERTSHEEFRYGSV-QLKDLPDSIDWREKGAV 164

Query: 131 TPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAF 188
             VK+QGSCG CW FSAVAA+EG+ K+ TG L+SLSEQ+++DC      GC GG MD AF
Sbjct: 165 VGVKDQGSCGSCWAFSAVAAIEGVNKLATGELVSLSEQELVDCDKGEDEGCNGGLMDYAF 224

Query: 189 SYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVS 247
            ++I++ GL  E  YPY+     C+  +   K   I  Y+DVP + E AL  AV+ QPVS
Sbjct: 225 GFVIKNGGLDTEADYPYKGYGTRCDRSKMNAKVVTIDGYEDVPVNDETALLKAVAHQPVS 284

Query: 248 VAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFI 307
           VAIDA     ++Y  G+F G CG +L+H VT VGYG  +   YW+IKNSWG NWGE G++
Sbjct: 285 VAIDAGGSSMQFYRSGIFTGRCGTDLDHGVTNVGYGKEDGKAYWIIKNSWGSNWGEKGYV 344

Query: 308 RMRRDVG-GAGLCGIARKASYPI 329
           +M R+ G  AGLCGI  +ASYP 
Sbjct: 345 KMARNTGLAAGLCGINMEASYPT 367


>gi|148927394|gb|ABR19828.1| cysteine proteinase [Elaeis guineensis]
          Length = 469

 Score =  281 bits (718), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 148/319 (46%), Positives = 198/319 (62%), Gaps = 11/319 (3%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQ---TYKLSLNEF 75
           +D +   ++ W AQ AR+Y    E   R +IF+ N RFI++ N   N    +++L L  F
Sbjct: 40  DDEVHRLYQAWKAQHARSYNALDEDEQRLEIFRDNLRFIDQHNAAANAGKYSFRLGLTRF 99

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNW-FGYPDSRRGLPRSIDWRARGAVTPVK 134
           ADLT+EE+ +++ G +         S   +N + F   D    LP SIDWR +GAV  VK
Sbjct: 100 ADLTNEEYRSTYLGVRTAGSRRRRNSTVGSNRYRFRSSDD---LPDSIDWRDKGAVVDVK 156

Query: 135 NQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSYII 192
           +QGSCG CW FS +AAVEGI  I TG LISLSEQ+++DC    ++GC GG MD AF +II
Sbjct: 157 DQGSCGSCWAFSTIAAVEGINHIVTGDLISLSEQELVDCDTYYNQGCNGGLMDYAFEFII 216

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAID 251
            + G+  +  YPY  R+G C+  R       I SY+DVP   E +L+ AV+ QPVSVAI+
Sbjct: 217 SNGGIDTDEDYPYTGRDGSCDQYRKNAHVVTIDSYEDVPINDEKSLQKAVANQPVSVAIE 276

Query: 252 ASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRR 311
           A    F+ Y  G+F G CG  L+H VT +GYGS N   YW++KNSWG +WGE G+IRM R
Sbjct: 277 AGGRAFQLYESGIFTGYCGTELDHGVTAIGYGSENGKYYWIVKNSWGSDWGESGYIRMER 336

Query: 312 DVGGA-GLCGIARKASYPI 329
           ++  A G CGIA +ASYPI
Sbjct: 337 NINSATGKCGIAMEASYPI 355


>gi|255539310|ref|XP_002510720.1| cysteine protease, putative [Ricinus communis]
 gi|223551421|gb|EEF52907.1| cysteine protease, putative [Ricinus communis]
          Length = 349

 Score =  281 bits (718), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 12/313 (3%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +    E W+++  R Y++  EK  RF+IFK N   I+  N++  + Y L LNEFADL+
Sbjct: 41  DKLIDLFESWISRFGRVYESAEEKLERFEIFKDNLFHIDDTNKK-VRNYWLGLNEFADLS 99

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
            EEF   + G K    ++S ++Q      F Y D    +P+S+DWR +GAVTPVKNQGSC
Sbjct: 100 HEEFKNKYLGLK---PDLSKRAQ--CPEEFTYKDV--AIPKSVDWRKKGAVTPVKNQGSC 152

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGL 197
           G CW FS VAAVEGI +I TG L SLSEQ+++DC  +   GC GG MD AF+YI+ + GL
Sbjct: 153 GSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDTTYNNGCNGGLMDYAFAYIVANGGL 212

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPG 256
             E  YPY   EG C+ ++    A  I  Y DVP  SE +L  A++ QP+S+AI+AS   
Sbjct: 213 HKEEDYPYIMEEGTCDMRKEESDAVTISGYHDVPQNSEESLLKALANQPLSIAIEASGRD 272

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA 316
           F++YSGGVF G CG  L+H V  VGYG+S    Y ++KNSWG  WGE G+IRM+R     
Sbjct: 273 FQFYSGGVFDGHCGTELDHGVAAVGYGTSKGLDYIIVKNSWGPKWGEKGYIRMKRKTSKP 332

Query: 317 -GLCGIARKASYP 328
            G+CGI + ASYP
Sbjct: 333 EGICGIYKMASYP 345


>gi|171702843|dbj|BAG16377.1| cysteine protease [Brassica rapa var. perviridis]
          Length = 431

 Score =  281 bits (718), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 145/314 (46%), Positives = 200/314 (63%), Gaps = 16/314 (5%)

Query: 22  ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDE 81
           +S  +E W+ +  +   +  EK  RF+IFK N RFI++ N + N +Y+L L +FADLT++
Sbjct: 38  VSRLYEEWVVKHGKAQNSLTEKDRRFEIFKDNLRFIDEHNGK-NLSYRLGLTKFADLTND 96

Query: 82  EFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG--LPRSIDWRARGAVTPVKNQGSC 139
           E+ + + G ++  R  +  S  Y        ++R G  +P S+DWR  GAV  VK+QGSC
Sbjct: 97  EYRSMYLGSRLK-RKATKTSLRY--------EARVGDAIPESVDWRKEGAVAEVKDQGSC 147

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGL 197
           G CW FS + AVEGI KI TG LISLSEQ+++DC  S   GC GG MD AF +II++ G+
Sbjct: 148 GSCWAFSTIGAVEGINKIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGI 207

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPG 256
             E  YPY+  +G C+  R   K   I SY+DVP  SE +L+ A+S QP+SVAI+     
Sbjct: 208 DTEEDYPYKGVDGRCDQTRKNAKVVTIDSYEDVPANSEESLKKALSHQPISVAIEGGGRA 267

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG-G 315
           F+ Y  G+F G CG +L+H V  VGYG+ N   YW++KNSWG +WGE G+IRM R++   
Sbjct: 268 FQLYDSGIFDGICGTDLDHGVVAVGYGTENGKDYWIVKNSWGTSWGESGYIRMERNIASS 327

Query: 316 AGLCGIARKASYPI 329
           AG CGIA + SYPI
Sbjct: 328 AGKCGIAVEPSYPI 341


>gi|297598407|ref|NP_001045533.2| Os01g0971400 [Oryza sativa Japonica Group]
 gi|15289977|dbj|BAB63672.1| putative cysteine protease CP1 [Oryza sativa Japonica Group]
 gi|125529282|gb|EAY77396.1| hypothetical protein OsI_05384 [Oryza sativa Indica Group]
 gi|125573472|gb|EAZ14987.1| hypothetical protein OsJ_04922 [Oryza sativa Japonica Group]
 gi|215740756|dbj|BAG97412.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215741010|dbj|BAG97505.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215765325|dbj|BAG87022.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215767338|dbj|BAG99566.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255674119|dbj|BAF07447.2| Os01g0971400 [Oryza sativa Japonica Group]
          Length = 365

 Score =  280 bits (717), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 158/318 (49%), Positives = 200/318 (62%), Gaps = 25/318 (7%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           E +MA+  + Y +  EK  RF++FK N   I++ N++    Y L LNEFADLT +EF A+
Sbjct: 53  EKFMAKYRKAYSSLEEKLRRFEVFKDNLNHIDEENKK-ITGYWLGLNEFADLTHDEFKAA 111

Query: 87  HTGYKM-PTRNISNQSQSYANNWFGYPDSRRG-LPRSIDWRARGAVTPVKNQGSCGCCWI 144
           + G  + P R  SN      +  F Y +     LP+ +DWR +GAVT VKNQG CG CW 
Sbjct: 112 YLGLTLTPARRNSN------DQLFRYEEVEAASLPKEVDWRKKGAVTEVKNQGQCGSCWA 165

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIRSQGLTDERV 202
           FS VAAVEGI  I TG L  LSEQ+++DC   G+ GC GG MD AFSYI  + GL  E  
Sbjct: 166 FSTVAAVEGINAIVTGNLTRLSEQELIDCDTDGNNGCSGGLMDYAFSYIAANGGLHTEES 225

Query: 203 YPYQRREGYCNWQRG---------AMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDA 252
           YPY   EG C  +RG         A  A  I  Y+DVP  +E AL  A++ QPVSVAI+A
Sbjct: 226 YPYLMEEGTC--RRGSTEGDDDGEAAAAVTISGYEDVPRNNEQALLKALAHQPVSVAIEA 283

Query: 253 SSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRR 311
           S   F++YSGGVF GPCG  L+H VT VGYG++++G  Y ++KNSWG +WGE G+IRMRR
Sbjct: 284 SGRNFQFYSGGVFDGPCGTRLDHGVTAVGYGTASKGHDYIIVKNSWGSHWGEKGYIRMRR 343

Query: 312 DVGGA-GLCGIARKASYP 328
             G   GLCGI + ASYP
Sbjct: 344 GTGKHDGLCGINKMASYP 361


>gi|414584879|tpg|DAA35450.1| TPA: cysteine protease 1 [Zea mays]
          Length = 522

 Score =  280 bits (717), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 138/309 (44%), Positives = 195/309 (63%), Gaps = 9/309 (2%)

Query: 26  HELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN-REGNQTYKLSLNEFADLTDEEFI 84
           +ELW+A+  R Y    E+  RF++F  N RF++  N R     ++L +N+FADLT++EF 
Sbjct: 109 YELWLAEHGRAYNALGERDRRFRVFWDNLRFVDAHNERAAEHGFRLGMNQFADLTNDEFR 168

Query: 85  ASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWI 144
           A++ G ++P    S +  +     + +      LP S+DWR +GAV PVKNQG CG CW 
Sbjct: 169 AAYLGARIPA---SRRRGTAVGERYRHGGGAEELPESVDWREKGAVAPVKNQGQCGSCWA 225

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDER 201
           FSAV++VE + +I TG +++LSEQ++++CS   G+ GC GG MD AF +II++ G+  E 
Sbjct: 226 FSAVSSVESVNQIVTGEMVTLSEQELVECSTDGGNSGCNGGLMDAAFDFIIKNGGIDTEG 285

Query: 202 VYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYY 260
            YPY+  +G C+  R   K   I  ++DVP   E +L+ AV+ QPVSVAI+A    F+ Y
Sbjct: 286 DYPYKAVDGKCDINRENAKVVSIDGFEDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLY 345

Query: 261 SGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLC 319
             GVF G C  NL+H V  VGYG+ N   YW+++NSWG  WGE G+IRM R+V    G C
Sbjct: 346 KAGVFTGTCTTNLDHGVVAVGYGTENGKDYWIVRNSWGAKWGEDGYIRMERNVNATTGKC 405

Query: 320 GIARKASYP 328
           GIA  ASYP
Sbjct: 406 GIAMMASYP 414


>gi|109119897|dbj|BAE96008.1| cysteine proteinase [Triticum aestivum]
          Length = 377

 Score =  280 bits (717), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 151/327 (46%), Positives = 201/327 (61%), Gaps = 14/327 (4%)

Query: 17  LHEDSISAKHELWMA----QSA-RTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLS 71
           L ++ + ++  LW      Q+A R  ++ AEK  RF  FK N  FI   N+ G++ Y+L 
Sbjct: 31  LEDNDLESEEALWDLYERWQTAHRVPRHHAEKHRRFGTFKSNVHFIHSHNKRGDRPYRLR 90

Query: 72  LNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRARGAV 130
           LN F D++  EF A+  G ++  R     +   +   F Y   +   LPRS+DWR +GAV
Sbjct: 91  LNRFGDMSQAEFRATFAGSRVSDRRRDGPATPPSVPGFMYAAVNVSDLPRSVDWRQKGAV 150

Query: 131 TPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRGCYGGWMDDAF 188
           T VKNQG CG CW FS V +VEGI  IRTG+L+SLSEQ+++DC  + + GC GG MD+AF
Sbjct: 151 TGVKNQGKCGSCWAFSTVVSVEGINAIRTGKLVSLSEQELIDCDTADNDGCEGGLMDNAF 210

Query: 189 SYIIRSQGLTDERVYPYQRREGYCNWQRGAMKA---ARIRSYQDVPT-SELALRYAVSRQ 244
            YI ++ GLT E  YPY+   G C   + A  +     I  +QDVP  SE AL  AV+ Q
Sbjct: 211 EYIKKNGGLTTEAAYPYRAANGTCKAAKVAKSSPMVVHIDGHQDVPANSEEALAKAVANQ 270

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGE 303
           PVSV IDAS   F +YS GVF G CG  L+H V +VGYG + +G  YW +KNSWG +WGE
Sbjct: 271 PVSVGIDASGKAFMFYSEGVFTGECGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGE 330

Query: 304 GGFIRMRRDVGG-AGLCGIARKASYPI 329
            G+IR+ +D G   GLCGIA +ASY +
Sbjct: 331 KGYIRVEKDSGAEGGLCGIAMEASYAV 357


>gi|357437715|ref|XP_003589133.1| Cysteine proteinase [Medicago truncatula]
 gi|87240770|gb|ABD32628.1| Granulin; Peptidase C1A, papain [Medicago truncatula]
 gi|355478181|gb|AES59384.1| Cysteine proteinase [Medicago truncatula]
          Length = 474

 Score =  280 bits (717), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 154/350 (44%), Positives = 208/350 (59%), Gaps = 24/350 (6%)

Query: 1   MLIIMVTWASLVMSRTL------HEDSISAK---------HELWMAQSARTYKNQAEKAM 45
           +LII     SL +  ++      H D  ++K         +E W+ +  ++Y    EK  
Sbjct: 15  VLIISSFTVSLALDMSIISYDKTHPDKSTSKRTNKEVLTMYEEWLVKHGKSYNGLGEKDK 74

Query: 46  RFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKM-PTRNISNQSQSY 104
           RF+IFK N +FI++ N   N TY+L L  FADLT+EE+ +   G K+ P R +     S 
Sbjct: 75  RFEIFKDNLKFIDEHNGL-NSTYRLGLTRFADLTNEEYRSKFLGTKIDPNRRMKKLGGSK 133

Query: 105 ANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLIS 164
           +N +   P     LP S+DWR  GAV  VK+Q SCG CW FSA+AAVEGI KI TG LIS
Sbjct: 134 SNRYA--PRVGDKLPESVDWRKEGAVVGVKDQASCGSCWAFSAIAAVEGINKIVTGDLIS 191

Query: 165 LSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAA 222
           LSEQ+++DC  S   GC GG MD AF +II + G+  E  YPY+  +G C+  R   K  
Sbjct: 192 LSEQELVDCDTSYNEGCNGGLMDYAFEFIISNGGIDSEDDYPYKAVDGRCDQNRKNAKVV 251

Query: 223 RIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVG 281
            I  Y+DVP   ELAL+ AV+ QP++VA++     F+ Y  GVF G CG  L+H V  VG
Sbjct: 252 TIDDYEDVPAYDELALQKAVANQPIAVAVEGGGREFQLYEYGVFTGRCGTALDHGVAAVG 311

Query: 282 YGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG--AGLCGIARKASYPI 329
           YG+ N   YW+++NSWG +WGE G+IR+ R++    AG CGIA + SYPI
Sbjct: 312 YGTENGKDYWIVRNSWGGSWGEQGYIRLERNLASSRAGKCGIAIEPSYPI 361


>gi|357437719|ref|XP_003589135.1| Cysteine proteinase [Medicago truncatula]
 gi|355478183|gb|AES59386.1| Cysteine proteinase [Medicago truncatula]
          Length = 457

 Score =  280 bits (717), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 154/350 (44%), Positives = 208/350 (59%), Gaps = 24/350 (6%)

Query: 1   MLIIMVTWASLVMSRTL------HEDSISAK---------HELWMAQSARTYKNQAEKAM 45
           +LII     SL +  ++      H D  ++K         +E W+ +  ++Y    EK  
Sbjct: 15  VLIISSFTVSLALDMSIISYDKTHPDKSTSKRTNKEVLTMYEEWLVKHGKSYNGLGEKDK 74

Query: 46  RFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKM-PTRNISNQSQSY 104
           RF+IFK N +FI++ N   N TY+L L  FADLT+EE+ +   G K+ P R +     S 
Sbjct: 75  RFEIFKDNLKFIDEHNGL-NSTYRLGLTRFADLTNEEYRSKFLGTKIDPNRRMKKLGGSK 133

Query: 105 ANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLIS 164
           +N +   P     LP S+DWR  GAV  VK+Q SCG CW FSA+AAVEGI KI TG LIS
Sbjct: 134 SNRYA--PRVGDKLPESVDWRKEGAVVGVKDQASCGSCWAFSAIAAVEGINKIVTGDLIS 191

Query: 165 LSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAA 222
           LSEQ+++DC  S   GC GG MD AF +II + G+  E  YPY+  +G C+  R   K  
Sbjct: 192 LSEQELVDCDTSYNEGCNGGLMDYAFEFIISNGGIDSEDDYPYKAVDGRCDQNRKNAKVV 251

Query: 223 RIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVG 281
            I  Y+DVP   ELAL+ AV+ QP++VA++     F+ Y  GVF G CG  L+H V  VG
Sbjct: 252 TIDDYEDVPAYDELALQKAVANQPIAVAVEGGGREFQLYEYGVFTGRCGTALDHGVAAVG 311

Query: 282 YGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG--AGLCGIARKASYPI 329
           YG+ N   YW+++NSWG +WGE G+IR+ R++    AG CGIA + SYPI
Sbjct: 312 YGTENGKDYWIVRNSWGGSWGEQGYIRLERNLASSRAGKCGIAIEPSYPI 361


>gi|242066206|ref|XP_002454392.1| hypothetical protein SORBIDRAFT_04g029960 [Sorghum bicolor]
 gi|241934223|gb|EES07368.1| hypothetical protein SORBIDRAFT_04g029960 [Sorghum bicolor]
          Length = 356

 Score =  280 bits (717), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 148/305 (48%), Positives = 196/305 (64%), Gaps = 8/305 (2%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           W  +  + Y +  EK  R+ IFK+N   I + NR+ N +Y L LN+FAD+T EEF A+H 
Sbjct: 48  WSVKHRKIYVSPKEKLKRYGIFKQNLMHIAETNRK-NGSYWLGLNQFADITHEEFKANHL 106

Query: 89  GYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAV 148
           G K     +  Q+++     F Y  +   LP S+DWR +GAVTPVKNQG CG CW FS+V
Sbjct: 107 GLKQGLSRMGAQTRTPTT--FRYAAAAN-LPWSVDWRYKGAVTPVKNQGKCGSCWAFSSV 163

Query: 149 AAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQ 206
           AAVEGI +I TG+L+SLSEQ+++DC      GC GG MD AF+YI+ SQG+  E  YPY 
Sbjct: 164 AAVEGINQIVTGKLVSLSEQELMDCDTMLDHGCEGGLMDFAFAYIMGSQGIHAEDDYPYL 223

Query: 207 RREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVF 265
             EGYC  ++       I  Y+DVP  SE++L  A++ QPVSV I A S  F++Y GGVF
Sbjct: 224 MEEGYCKEKQPYANVVTITGYEDVPENSEISLLKALAHQPVSVGIAAGSRDFQFYKGGVF 283

Query: 266 AGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARK 324
            G C + L+HA+T VGYGSS    Y  +KNSWG+NWGE G++R++   G   G+CGI   
Sbjct: 284 DGSCSDELDHALTAVGYGSSYGQNYITMKNSWGKNWGEQGYVRIKMGTGKPEGVCGIYTM 343

Query: 325 ASYPI 329
           ASYP+
Sbjct: 344 ASYPV 348


>gi|356508487|ref|XP_003522988.1| PREDICTED: xylem cysteine proteinase 2-like [Glycine max]
          Length = 349

 Score =  280 bits (717), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 150/313 (47%), Positives = 199/313 (63%), Gaps = 12/313 (3%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +    E WM++  + Y++  EK  RF IFK N + I++ N+  +  Y L LNEFADL+
Sbjct: 41  DKLIELFESWMSRHGKIYQSIEEKLHRFDIFKDNLKHIDERNKVVS-NYWLGLNEFADLS 99

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
            +EF   + G K+   + S + +S     F Y D    LP+S+DWR +GAVT VKNQGSC
Sbjct: 100 HQEFKNKYLGLKV---DYSRRRESPEE--FTYKDFE--LPKSVDWRKKGAVTQVKNQGSC 152

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGL 197
           G CW FS VAAVEGI +I TG L SLSEQ+++DC  +   GC GG MD AFS+I+ + GL
Sbjct: 153 GSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDRTYNNGCNGGLMDYAFSFIVENGGL 212

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPG 256
             E  YPY   EG C   +   +   I  Y DVP  +E +L  A+  QP+SVAI+AS   
Sbjct: 213 HKEEDYPYIMEEGTCEMTKEETEVVTISGYHDVPQNNEQSLLKALVNQPLSVAIEASGRD 272

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG- 315
           F++YSGGVF G CG++L+H V  VGYG+S    Y ++KNSWG  WGE G+IRMRR++G  
Sbjct: 273 FQFYSGGVFDGHCGSDLDHGVAAVGYGTSKGVNYIIVKNSWGSKWGEKGYIRMRRNIGKP 332

Query: 316 AGLCGIARKASYP 328
            G+CGI + ASYP
Sbjct: 333 EGICGIYKMASYP 345


>gi|226501480|ref|NP_001150266.1| cysteine protease 1 precursor [Zea mays]
 gi|195637948|gb|ACG38442.1| cysteine protease 1 precursor [Zea mays]
          Length = 462

 Score =  280 bits (717), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 137/309 (44%), Positives = 196/309 (63%), Gaps = 9/309 (2%)

Query: 26  HELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN-REGNQTYKLSLNEFADLTDEEFI 84
           +ELW+A+  R Y    E+  RF++F  N RF++  N R     ++L +N+FADLT++EF 
Sbjct: 49  YELWLAEHGRAYNALGERDRRFRVFWDNLRFVDAHNERAAEHGFRLGMNQFADLTNDEFR 108

Query: 85  ASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWI 144
           A++ G ++P    + +  +     + +      LP S+DWR +GAV PVKNQG CG CW 
Sbjct: 109 AAYLGARIPA---ARRRGTAVGERYRHGGGAEELPESVDWREKGAVAPVKNQGQCGSCWA 165

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDER 201
           FSAV++VE + +I TG +++LSEQ++++CS   G+ GC GG MD AF +II++ G+  E 
Sbjct: 166 FSAVSSVESVNQIVTGEMVTLSEQELVECSTDGGNSGCNGGLMDAAFDFIIKNGGIDTEG 225

Query: 202 VYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYY 260
            YPY+  +G C+  R   K   I  ++DVP   E +L+ AV+ QPVSVAI+A    F+ Y
Sbjct: 226 DYPYKAVDGKCDINRENAKVVSIDGFEDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLY 285

Query: 261 SGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLC 319
             GVF+G C  NL+H V  VGYG+ N   YW+++NSWG  WGE G+IRM R+V    G C
Sbjct: 286 KAGVFSGTCTTNLDHGVVAVGYGTENGKDYWIVRNSWGAKWGEDGYIRMERNVNATTGKC 345

Query: 320 GIARKASYP 328
           GIA  ASYP
Sbjct: 346 GIAMMASYP 354


>gi|148927382|gb|ABR19827.1| cysteine proteinase [Elaeis guineensis]
          Length = 470

 Score =  280 bits (717), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 152/335 (45%), Positives = 205/335 (61%), Gaps = 11/335 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           M II    A  V      E+ +   +E W+A+  R Y    EK  RF+IFK N  FI+  
Sbjct: 25  MSIISYDEAHGVRGLERSEEEMRILYEGWLAKHGRAYNALGEKERRFEIFKDNVLFIDAH 84

Query: 61  N---REGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N     G+++++L LN FAD+T+EE+ A + G    TR   ++ ++   +     ++   
Sbjct: 85  NAAADAGHRSFRLGLNRFADMTNEEYRAVYLG----TRPAGHRRRARVGSDRYRYNAGED 140

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-- 175
           LP S+DWRA+GAV  VK+QGSCG CW FS VAAVEGI KI TG LISLSEQ+++DC    
Sbjct: 141 LPESVDWRAKGAVAAVKDQGSCGSCWAFSTVAAVEGINKIVTGDLISLSEQELVDCDNGY 200

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-E 234
           ++GC GG MD  F +II + G+  E  YPY  R+G C+  R   K   I  Y+DVP + E
Sbjct: 201 NQGCNGGLMDYGFEFIINNGGIDTEEDYPYTARDGKCDQYRKNAKVVSIDGYEDVPVNDE 260

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIK 294
            AL+ AV+ QPVSVAI+A    F+ Y  G+F G CG +L+H V  VGYG+ N   YW+++
Sbjct: 261 KALQKAVANQPVSVAIEAGGREFQLYHSGIFTGRCGTDLDHGVVAVGYGTENGKDYWIVR 320

Query: 295 NSWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYP 328
           NSWG +WGE G+IRM R+V    G CGIA + SYP
Sbjct: 321 NSWGGDWGESGYIRMERNVNTSTGKCGIAIEPSYP 355


>gi|45738078|gb|AAS75836.1| fastuosain precursor [Bromelia fastuosa]
          Length = 324

 Score =  280 bits (716), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 146/312 (46%), Positives = 195/312 (62%), Gaps = 11/312 (3%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +  + E WMA+  R Y + AEK  RF+IFK N   IE FN     +Y L +N+F D+T
Sbjct: 4   DPMMERFEEWMAEYGRVYNDNAEKMRRFQIFKNNVNHIETFNNRSGNSYTLGVNQFTDMT 63

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
           + EF+A +TG  +P     +   S+ +           +P+SIDWR  GAVT VKNQGSC
Sbjct: 64  NNEFLARYTGASLPLNIERDPVVSFDD------VDISAVPQSIDWRDYGAVTSVKNQGSC 117

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRGCYGGWMDDAFSYIIRSQGLTD 199
           G CW FSA+A VEGI KI+ G LISLSEQ+VLDC+ S GC GGW++ A+ +II + G+T 
Sbjct: 118 GSCWAFSAIATVEGIYKIKAGNLISLSEQEVLDCALSYGCDGGWVNKAYDFIISNNGVTS 177

Query: 200 ERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFR 258
               PY+  +G CN      K A I  Y  V + +E ++  AV+ QP++  IDA    F+
Sbjct: 178 FANLPYKGYKGPCNHNDLPNK-AYITGYTYVQSNNERSMMIAVANQPIAALIDAGGD-FQ 235

Query: 259 YYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRDVGGA- 316
           YY  GVF G CG +LNHA+T++GYG ++ G  YW++KNSWG +WGE G+IRM RDV    
Sbjct: 236 YYKSGVFTGSCGTSLNHAITVIGYGQTSSGTKYWIVKNSWGTSWGERGYIRMARDVSSPY 295

Query: 317 GLCGIARKASYP 328
           GLCGIA    +P
Sbjct: 296 GLCGIAMAPLFP 307


>gi|414591545|tpg|DAA42116.1| TPA: hypothetical protein ZEAMMB73_388689 [Zea mays]
          Length = 384

 Score =  280 bits (716), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 148/322 (45%), Positives = 213/322 (66%), Gaps = 11/322 (3%)

Query: 19  EDSISAKHELWMAQ----SARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNE 74
           E+S+ A +E W +     S R   ++ ++A RF +FK+N R++ + NR+  + ++L+LN+
Sbjct: 34  EESLRALYERWRSHYHRVSPRDGDDKQQQARRFNVFKENARYVHEANRKDGRPFRLALNK 93

Query: 75  FADLTDEEFIASHTGYKM-PTRNISNQSQSYANNWFGYPDS-RRGLPRSIDWRARGAVTP 132
           FAD+T +EF  ++ G +    R    +++S+A+   G   S    LP ++DWR RGAVT 
Sbjct: 94  FADMTTDEFRRTYAGSRTRHHRAQLGEARSFAHAQHGRGGSGTTNLPPAVDWRLRGAVTG 153

Query: 133 VKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSY 190
           VK+QG CG CW FSA+AAVEG+ KI TG+L+SLSEQ+++DC    ++GC GG MD AF Y
Sbjct: 154 VKDQGQCGSCWAFSAIAAVEGVNKIMTGKLVSLSEQELVDCDDVDNQGCDGGLMDYAFQY 213

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVA 249
           I R+ G+T E  YPY   +  CN  +       I  Y+DVP  +E AL+ AV+ QPV+VA
Sbjct: 214 IQRNGGVTTESNYPYLAEQRSCNKAKERSHDVTIDGYEDVPANNEDALQKAVASQPVAVA 273

Query: 250 IDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIR 308
           I+AS   F++YS GVF G CG +L+H V  VGYG++ +G  YW +KNSWG++WGE G+IR
Sbjct: 274 IEASGQDFQFYSEGVFTGSCGTDLDHGVAAVGYGTTGDGTKYWTVKNSWGEDWGERGYIR 333

Query: 309 MRRDVGGA-GLCGIARKASYPI 329
           M+R V  + GLCGIA + SYP 
Sbjct: 334 MQRGVPDSRGLCGIAMEPSYPT 355


>gi|413919736|gb|AFW59668.1| cysteine protease 1 [Zea mays]
          Length = 469

 Score =  280 bits (716), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 142/309 (45%), Positives = 197/309 (63%), Gaps = 15/309 (4%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEFADLTDEEFIA 85
           WMA   RTY    E+  RF++F+ N R+++  N     G  +++L LN FADLT++E+ A
Sbjct: 49  WMAAHGRTYNAVGEEERRFEVFRDNLRYVDAHNAAADAGVHSFRLGLNRFADLTNDEYRA 108

Query: 86  SHTGYKM-PTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWI 144
           ++ G +  P R      +  A +          LP S+DWRA+GAV  VK+QGSCG CW 
Sbjct: 109 TYLGVRSRPQRERRLGDRYLAGD-------NEDLPESVDWRAKGAVAEVKDQGSCGSCWA 161

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERV 202
           FS +AAVEGI +I TG +ISLSEQ+++DC  S  +GC GG MD AF +II + G+  E  
Sbjct: 162 FSTIAAVEGINQIVTGDMISLSEQELVDCDTSYNQGCNGGLMDYAFEFIINNGGIDTEED 221

Query: 203 YPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYS 261
           YPY+  +G C+  R   K   I SY+DVP  SE +L+ AV+ QP+SVAI+A    F+ Y+
Sbjct: 222 YPYKGTDGRCDVNRKNAKVVTIDSYEDVPANSEKSLQKAVANQPISVAIEAGGRAFQLYN 281

Query: 262 GGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV-GGAGLCG 320
            G+F G CG  L+H VT VGYG+ N   YW++KNSWG +WGE G++RM R++   +G CG
Sbjct: 282 SGIFTGTCGTALDHGVTAVGYGTENGKDYWIVKNSWGSSWGESGYVRMERNIKASSGKCG 341

Query: 321 IARKASYPI 329
           IA + SYP+
Sbjct: 342 IAVEPSYPL 350


>gi|357166359|ref|XP_003580684.1| PREDICTED: oryzain alpha chain-like [Brachypodium distachyon]
          Length = 456

 Score =  280 bits (715), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 143/330 (43%), Positives = 205/330 (62%), Gaps = 19/330 (5%)

Query: 10  SLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQ 66
           S+V      E+ +   +  WMA++ RTY    E+  RF++F+ N R++++ N     G  
Sbjct: 26  SIVSYGERSEEEVRRMYVEWMAENGRTYNAIGEEERRFEVFRDNLRYVDQHNAAADAGLH 85

Query: 67  TYKLSLNEFADLTDEEFIASHTGYKMP---TRNISNQSQSYANNWFGYPDSRRGLPRSID 123
           +++L LN FADLT+EE+  ++ G +      R +S + Q+  N           LP S+D
Sbjct: 86  SFRLGLNRFADLTNEEYRDTYLGVRTKPVRERRLSGRYQAADN---------EELPESVD 136

Query: 124 WRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYG 181
           WR +GAV  VK+QG CG CW FSA+AAVEGI +I TG +I+LSEQ+++DC  S  +GC G
Sbjct: 137 WREKGAVAKVKDQGGCGSCWAFSAIAAVEGINQIVTGDMIALSEQELVDCDTSYNQGCNG 196

Query: 182 GWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYA 240
           G MD AF +II + G+  E  YPY+ R+  C+  +   K   I  Y+DVP  SEL+L+ A
Sbjct: 197 GLMDYAFEFIINNGGIDSEEDYPYKERDNRCDANKKNAKVVTIDGYEDVPVNSELSLKKA 256

Query: 241 VSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQN 300
           V+ QP+SVAI+A    F+ Y  G+F G CG  L+H VT VGYGS N   YW++KNSWG  
Sbjct: 257 VANQPISVAIEAGGRAFQLYKSGIFTGRCGTALDHGVTAVGYGSENGKDYWIVKNSWGTV 316

Query: 301 WGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
           WGE G++R+ R++   +G CGIA + SYP+
Sbjct: 317 WGEDGYVRLERNIKATSGKCGIAIEPSYPL 346


>gi|363814535|ref|NP_001242660.1| uncharacterized protein LOC100807362 precursor [Glycine max]
 gi|255636658|gb|ACU18666.1| unknown [Glycine max]
          Length = 367

 Score =  280 bits (715), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 143/317 (45%), Positives = 200/317 (63%), Gaps = 13/317 (4%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           ++ + + +E W+ +  + Y    EK  RF+IFK N  FIE+ N   N+TYK+ LN F+DL
Sbjct: 45  DEEVMSIYEEWLVKHGKVYNAVEEKEKRFQIFKDNLNFIEEHNAV-NRTYKVGLNRFSDL 103

Query: 79  TDEEFIASHTGYKM-PTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQG 137
           ++EE+ + + G K+ P+R ++  S+ Y+      P     LP S+DWR  GAV  VKNQ 
Sbjct: 104 SNEEYRSKYLGTKIDPSRMMARPSRRYS------PRVADNLPESVDWRKEGAVVRVKNQS 157

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIRSQ 195
            C  CW FSA+AAVEGI KI TG L +LSEQ++LDC  + + GC GG +D AF +II + 
Sbjct: 158 ECEGCWAFSAIAAVEGINKIVTGNLTALSEQELLDCDRTVNAGCSGGLVDYAFEFIINNG 217

Query: 196 GLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASS 254
           G+  E  YP+Q  +G C+  +   +A  I  Y+ VP   ELAL+ AV+ QPVSVAI+A  
Sbjct: 218 GIDTEEDYPFQGADGICDQYKINARAVTIDGYERVPAYDELALKKAVANQPVSVAIEAYG 277

Query: 255 PGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG 314
             F+ Y  G+F G CG +++H VT VGYG+ N   YW++KNSWG+NWGE G++ M R++ 
Sbjct: 278 KEFQLYESGIFTGTCGTSIDHGVTAVGYGTENGIDYWIVKNSWGENWGEAGYVGMERNIA 337

Query: 315 --GAGLCGIARKASYPI 329
              AG CGIA    YPI
Sbjct: 338 EDTAGKCGIAILTLYPI 354


>gi|226503129|ref|NP_001149806.1| LOC100283433 precursor [Zea mays]
 gi|195634783|gb|ACG36860.1| xylem cysteine proteinase 2 precursor [Zea mays]
 gi|219884977|gb|ACL52863.1| unknown [Zea mays]
          Length = 377

 Score =  280 bits (715), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 155/316 (49%), Positives = 199/316 (62%), Gaps = 11/316 (3%)

Query: 18  HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFAD 77
             D +    E W+A+  + Y +  EK  RF++FK N   I++ NR+   +Y L LN FAD
Sbjct: 64  QHDRLVRLFEEWVAKYRKAYGSFEEKLRRFEVFKDNLHHIDEANRKEVTSYWLGLNAFAD 123

Query: 78  LTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQG 137
           LT +EF A++ G  +P R    + +     + G  D    +P S+DWR +GAVT VKNQG
Sbjct: 124 LTHDEFKATYLGL-LPKRTSGGRFR-----YGGVGDGGDEVPASVDWRKKGAVTEVKNQG 177

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYIIRSQ 195
            CG CW FS VAAVEGI +I TG L SLSEQQ++DCS  G+ GC GG MD+AFS+I    
Sbjct: 178 QCGSCWAFSTVAAVEGINQIVTGNLTSLSEQQLVDCSTDGNNGCSGGVMDNAFSFIATGA 237

Query: 196 GLTDERVYPYQRREGYCNWQ-RGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDAS 253
           GL  E  YPY   EG C+ + R       I  Y+DVP + E AL  A++ QPVSVAI+AS
Sbjct: 238 GLRSEEAYPYLMEEGDCDDRARDGEVLVTISGYEDVPANDEQALVKALAHQPVSVAIEAS 297

Query: 254 SPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV 313
              F++YSGGVF GPCG+ L+H V  VGYGSS    Y ++KNSWG +WGE G+IRM+R  
Sbjct: 298 GRHFQFYSGGVFDGPCGSELDHGVAAVGYGSSKGQDYIIVKNSWGTHWGEKGYIRMKRGT 357

Query: 314 GGA-GLCGIARKASYP 328
           G   GLCGI + ASYP
Sbjct: 358 GKPEGLCGINKMASYP 373


>gi|413942348|gb|AFW74997.1| Xylem cysteine proteinase 2 [Zea mays]
          Length = 391

 Score =  280 bits (715), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 154/307 (50%), Positives = 197/307 (64%), Gaps = 11/307 (3%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           E W+A+  + Y +  EK  RF++FK N   I++ NR+   +Y L LN FADLT +EF A+
Sbjct: 87  EEWVAKYRKAYGSFEEKLRRFEVFKDNLHHIDEANRKEVTSYWLGLNAFADLTHDEFKAT 146

Query: 87  HTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFS 146
           + G  +P R    + +     + G  D    +P S+DWR +GAVT VKNQG CG CW FS
Sbjct: 147 YLGL-LPKRTSGGRFR-----YGGVGDGGDEVPASVDWRKKGAVTEVKNQGQCGSCWAFS 200

Query: 147 AVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYIIRSQGLTDERVYP 204
            VAAVEGI +I TG L SLSEQQ++DCS  G+ GC GG MD+AFS+I    GL  E  YP
Sbjct: 201 TVAAVEGINQIVTGNLTSLSEQQLVDCSTDGNNGCSGGVMDNAFSFIATGAGLRSEEAYP 260

Query: 205 YQRREGYCNWQ-RGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYSG 262
           Y   EG C+ + R       I  Y+DVP + E AL  A++ QPVSVAI+AS   F++YSG
Sbjct: 261 YLMEEGDCDDRARDGEVLVTISGYEDVPANDEQALVKALAHQPVSVAIEASGRHFQFYSG 320

Query: 263 GVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGI 321
           GVF GPCG+ L+H V  VGYGSS    Y ++KNSWG +WGE G+IRM+R  G   GLCGI
Sbjct: 321 GVFDGPCGSELDHGVAAVGYGSSKGQDYIIVKNSWGTHWGEKGYIRMKRGTGKPEGLCGI 380

Query: 322 ARKASYP 328
            + ASYP
Sbjct: 381 NKMASYP 387


>gi|297843784|ref|XP_002889773.1| hypothetical protein ARALYDRAFT_471096 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297335615|gb|EFH66032.1| hypothetical protein ARALYDRAFT_471096 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 439

 Score =  280 bits (715), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 147/309 (47%), Positives = 195/309 (63%), Gaps = 16/309 (5%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           W  +  +TY ++ E+  R +IFK N  F+ + N   N TY LSLN FADLT  EF AS  
Sbjct: 35  WCQRHGKTYGSEEERQQRIQIFKDNHDFVTQHNLITNATYSLSLNAFADLTHHEFKASRL 94

Query: 89  GYKMPTRNI--SNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFS 146
           G  +   ++  +++ QS   N          +P S+DWR +GAVT VK+QGSCG CW FS
Sbjct: 95  GLSVSASSLIMASKGQSLGGN--------AKVPDSVDWRKKGAVTNVKDQGSCGACWSFS 146

Query: 147 AVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERVYP 204
           A  A+EGI +I TG LISLSEQ+++DC  S   GC GG MD AF ++I++ G+  E+ YP
Sbjct: 147 ATGAMEGINQIVTGDLISLSEQELIDCDKSYNAGCNGGLMDYAFEFVIKNHGIDTEKDYP 206

Query: 205 YQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYS-- 261
           YQ R+G C   +   K   I SY  V ++ E ALR AV+ QPVSV I  S   F+ YS  
Sbjct: 207 YQERDGTCKKDKLKQKVVTIDSYAGVKSNDEKALREAVAAQPVSVGICGSERAFQLYSRV 266

Query: 262 GGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCG 320
            G+F+GPC  +L+HAV IVGYGS N   YW++KNSWG++WG  GF+ M+R+ G + G+CG
Sbjct: 267 SGIFSGPCSTSLDHAVLIVGYGSQNGVDYWIVKNSWGKSWGMDGFMHMQRNTGNSEGICG 326

Query: 321 IARKASYPI 329
           I   ASYPI
Sbjct: 327 INMLASYPI 335


>gi|226496089|ref|NP_001149658.1| cysteine protease 1 precursor [Zea mays]
 gi|195629242|gb|ACG36262.1| cysteine protease 1 precursor [Zea mays]
          Length = 469

 Score =  280 bits (715), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 141/309 (45%), Positives = 197/309 (63%), Gaps = 15/309 (4%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEFADLTDEEFIA 85
           WMA   RTY    E+  RF++F+ N R+++  N     G  +++L LN FADLT++E+ A
Sbjct: 49  WMAAHGRTYNAVGEEERRFEVFRDNLRYVDAHNAAADAGVHSFRLGLNRFADLTNDEYRA 108

Query: 86  SHTGYKM-PTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWI 144
           ++ G +  P R      +  A +          LP S+DWRA+GAV  +K+QGSCG CW 
Sbjct: 109 TYLGVRSRPQRERRLGDRYLAGD-------NEDLPESVDWRAKGAVAEIKDQGSCGSCWA 161

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERV 202
           FS +AAVEGI +I TG +ISLSEQ+++DC  S  +GC GG MD AF +II + G+  E  
Sbjct: 162 FSTIAAVEGINQIVTGDMISLSEQELVDCDTSYNQGCNGGLMDYAFEFIINNGGIDTEED 221

Query: 203 YPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYS 261
           YPY+  +G C+  R   K   I SY+DVP  SE +L+ AV+ QP+SVAI+A    F+ Y+
Sbjct: 222 YPYKGTDGRCDVNRKNAKVVTIDSYEDVPANSEKSLQKAVANQPISVAIEAGGRAFQLYN 281

Query: 262 GGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV-GGAGLCG 320
            G+F G CG  L+H VT VGYG+ N   YW++KNSWG +WGE G++RM R++   +G CG
Sbjct: 282 SGIFTGTCGTALDHGVTAVGYGTENGKDYWIVKNSWGSSWGESGYVRMERNIKASSGKCG 341

Query: 321 IARKASYPI 329
           IA + SYP+
Sbjct: 342 IAVEPSYPL 350


>gi|356517184|ref|XP_003527269.1| PREDICTED: xylem cysteine proteinase 2-like [Glycine max]
          Length = 350

 Score =  280 bits (715), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 148/313 (47%), Positives = 200/313 (63%), Gaps = 12/313 (3%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +    E W+++  + Y++  EK  RF+IFK N + I++ N+  +  Y L LNEFADL+
Sbjct: 42  DKLIELFESWISRHGKIYQSIEEKLHRFEIFKDNLKHIDERNKVVS-NYWLGLNEFADLS 100

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
            +EF   + G K+   + S + +S     F Y D    LP+S+DWR +GAVT VKNQGSC
Sbjct: 101 HQEFKNKYLGLKV---DYSRRRESPEE--FTYKDVE--LPKSVDWRKKGAVTQVKNQGSC 153

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGL 197
           G CW FS VAAVEGI +I TG L SLSEQ+++DC  +   GC GG MD AFS+I+ + GL
Sbjct: 154 GSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDRTYNNGCNGGLMDYAFSFIVENDGL 213

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPG 256
             E  YPY   EG C   +   +   I  Y DVP  +E +L  A++ QP+SVAI+AS   
Sbjct: 214 HKEEDYPYIMEEGTCEMAKEETEVVTISGYHDVPQNNEQSLLKALANQPLSVAIEASGRD 273

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG- 315
           F++YSGGVF G CG++L+H V  VGYG++    Y  +KNSWG  WGE G+IRMRR++G  
Sbjct: 274 FQFYSGGVFDGHCGSDLDHGVAAVGYGTAKGVDYITVKNSWGSKWGEKGYIRMRRNIGKP 333

Query: 316 AGLCGIARKASYP 328
            G+CGI + ASYP
Sbjct: 334 EGICGIYKMASYP 346


>gi|414870137|tpg|DAA48694.1| TPA: vignain [Zea mays]
          Length = 484

 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 150/319 (47%), Positives = 201/319 (63%), Gaps = 13/319 (4%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           E+++ A +E W  + A   ++  +KA RF +FK N R I +FNR  ++ YKL LN F D+
Sbjct: 149 EEALWALYERWRGRHALA-RDLGDKARRFNVFKANVRLIHEFNRR-DEPYKLRLNRFGDM 206

Query: 79  TDEEFIASHTGYKMPTRNI---SNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
           T +EF   + G ++    +     Q  S + + F Y D+R  +P S+DWR +GAVT VK+
Sbjct: 207 TADEFRRHYAGSRVAHHRMFRGDRQGSSASASSFMYADAR-DVPASVDWRQKGAVTDVKD 265

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYIIR 193
           QG CG CW FS +AAVEGI  I+T  L SLSEQQ++DC    + GC GG MD AF YI +
Sbjct: 266 QGQCGSCWAFSTIAAVEGINAIKTKNLTSLSEQQLVDCDTKANAGCNGGLMDYAFQYIAK 325

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDA 252
             G+  E  YPY+ R+  C  ++       I  Y+DVP + E AL+ AV+ QPVSVAI+A
Sbjct: 326 HGGVAAEDAYPYRARQASC--KKSPAPVVTIDGYEDVPANDESALKKAVAHQPVSVAIEA 383

Query: 253 SSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRR 311
           S   F++YS GVF+G CG  L+H V  VGYG + +G  YWL+KNSWG  WGE G+IRM R
Sbjct: 384 SGSHFQFYSEGVFSGRCGTELDHGVAAVGYGVTADGTKYWLVKNSWGPEWGEKGYIRMAR 443

Query: 312 DVGGA-GLCGIARKASYPI 329
           DV    G CGIA +ASYP+
Sbjct: 444 DVAAKEGHCGIAMEASYPV 462


>gi|262360187|gb|ACY38051.2| cysteine proteinase C1A [Dactylis glomerata]
          Length = 365

 Score =  279 bits (714), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 147/318 (46%), Positives = 210/318 (66%), Gaps = 11/318 (3%)

Query: 19  EDSISAKHELWMAQ---SARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEF 75
           E+S+   +E W +    S R    +AE A RF +FK+N R+I + N++ ++ ++L+LN+F
Sbjct: 33  EESLRGLYETWRSHHTVSRRGLGAEAE-ARRFNVFKENVRYIHEANKK-DRPFRLALNKF 90

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
           AD+T +EF  ++ G ++      +  +      F Y D+   LP ++DWR +GAVTP+K+
Sbjct: 91  ADMTTDEFRRTYAGSRVRHHRSLSGGRRQGGGSFMYADAEN-LPAAVDWRQKGAVTPIKD 149

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYIIR 193
           QG CG CW FS + AVEGI KIRTGRL+SLSEQ+++DC+   + GC GG MD AF +I +
Sbjct: 150 QGQCGSCWAFSTIVAVEGINKIRTGRLVSLSEQELMDCNIGENDGCNGGLMDVAFQFIQQ 209

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDA 252
           + G+T E  YPYQ  +  C+  +       I  Y+DVP + E AL+ AV+ QPVSVAIDA
Sbjct: 210 NGGITTEASYPYQGEQNSCDQSKENSHDVSIDGYEDVPANDESALQKAVANQPVSVAIDA 269

Query: 253 SSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRR 311
           S   F++YS GVF    G +L+H V  VGYG++ +G  YW++KNSWG++WGE G+IRM+R
Sbjct: 270 SGNDFQFYSEGVFTTDGGTDLDHGVAAVGYGTTRDGTKYWIVKNSWGEDWGEKGYIRMQR 329

Query: 312 DVGGA-GLCGIARKASYP 328
            V  A GLCGIA +ASYP
Sbjct: 330 GVKQAEGLCGIAMEASYP 347


>gi|351629615|gb|AEQ54771.1| KDDL-tailed cysteine proteinase CP4 [Coffea canephora]
          Length = 359

 Score =  279 bits (714), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 150/338 (44%), Positives = 216/338 (63%), Gaps = 16/338 (4%)

Query: 3   IIMVTWASLVMSRTLHEDSISAKHELW-MAQSARTY----KNQAEKAMRFKIFKKNFRFI 57
           +++       MS  + E  ++++  LW + +  R++    ++ +EK  RF +FK N   I
Sbjct: 11  VVLAVILVAAMSMEITERDLASEESLWDLYERWRSHHTVSRDLSEKRKRFNVFKANVHHI 70

Query: 58  EKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
            K N++ ++ YKL LN FAD+T+ EF      Y    ++      S AN  F +  +   
Sbjct: 71  HKVNQK-DKPYKLKLNSFADMTNHEF---REFYSSKVKHYRMLHGSRANTGFMHGKTE-S 125

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGS 176
           LP S+DWR +GAVT VKNQG CG CW FS V  VEGI KI+TG+L+SLSEQ+++DC + +
Sbjct: 126 LPASVDWRKQGAVTGVKNQGKCGSCWAFSTVVGVEGINKIKTGQLVSLSEQELVDCETDN 185

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-EL 235
            GC GG M++A+ +I +S G+T ER+YPY+ R+G C+  +    A  I  ++ VP + E 
Sbjct: 186 EGCNGGLMENAYEFIKKSGGITTERLYPYKARDGSCDSSKMNAPAVTIDGHEMVPANDEN 245

Query: 236 ALRYAVSRQPVSVAIDASSPGFRYYSGGVFAG-PCGNNLNHAVTIVGYGSSNEG-PYWLI 293
           AL  AV+ QPVSVAIDAS    ++YS GV+AG  CGN L+H V +VGYG++ +G  YW++
Sbjct: 246 ALMKAVANQPVSVAIDASGSDMQFYSEGVYAGDSCGNELDHGVAVVGYGTALDGTKYWIV 305

Query: 294 KNSWGQNWGEGGFIRMRRDVGGA--GLCGIARKASYPI 329
           KNSWG  WGE G+IRM+R V  A  G+CGIA +ASYP+
Sbjct: 306 KNSWGTGWGEQGYIRMQRGVDAAEGGVCGIAMEASYPL 343


>gi|297830592|ref|XP_002883178.1| hypothetical protein ARALYDRAFT_479457 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329018|gb|EFH59437.1| hypothetical protein ARALYDRAFT_479457 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 452

 Score =  279 bits (714), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 142/334 (42%), Positives = 206/334 (61%), Gaps = 12/334 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAK-HELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           ML+I ++  S+  + T   ++ + + +E W+ ++ + Y    EK  RF+IF  N ++IE+
Sbjct: 17  MLLISLSLGSVTAADTTRNEAEARRMYEQWLVENRKNYNGLGEKETRFEIFTDNLKYIEE 76

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLP 119
            N   NQT+++ L  FADLT++EF A +   KM    +  + + Y    +   D+   LP
Sbjct: 77  HNSVPNQTFEVGLTRFADLTNDEFRAIYLRSKMERTRVPVKGERY---LYKVGDT---LP 130

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-- 177
             IDWRA+GAV PVK+QG+CG CW FSA+ AVEGI +I+TG LISLSEQ+++DC  S   
Sbjct: 131 DQIDWRAKGAVNPVKDQGNCGSCWAFSAIGAVEGINQIKTGELISLSEQELVDCDTSYNG 190

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQ-RREGYCNWQRGAMKAARIRSYQDVP-TSEL 235
           GC GG MD AF +II + G+  E  YPY    +  CN  +   +   I  Y+DVP   E 
Sbjct: 191 GCGGGLMDYAFKFIIENGGIDTEEDYPYTATDDNICNSDKKNSRVVTIDGYEDVPQNDEK 250

Query: 236 ALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKN 295
           +L+ A++ QP+SVAI+A    F+ Y  GVF G CG +L+H V  VGYGS     YW+++N
Sbjct: 251 SLKKALANQPISVAIEAGGRAFQLYKSGVFTGTCGTSLDHGVVAVGYGSEGGQDYWIVRN 310

Query: 296 SWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYP 328
           SWG NWGE G+ ++ R++   +G CG+A  ASYP
Sbjct: 311 SWGSNWGESGYFKLERNIKESSGKCGVAMMASYP 344


>gi|62320725|dbj|BAD95392.1| cysteine proteinase RD21A [Arabidopsis thaliana]
          Length = 433

 Score =  279 bits (714), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 143/319 (44%), Positives = 204/319 (63%), Gaps = 17/319 (5%)

Query: 19  EDSISAKHELWMAQ--SARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFA 76
           E  + + +E W+ +   A++  +  EK  RF+IFK N RF+++ N E N +Y+L L  FA
Sbjct: 43  EAEVMSIYEAWLVKHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHN-EKNLSYRLGLTRFA 101

Query: 77  DLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG--LPRSIDWRARGAVTPVK 134
           DLT++E+ + + G KM  +     S  Y        ++R G  LP SIDWR +GAV  VK
Sbjct: 102 DLTNDEYRSKYLGAKMEKKGERRTSLRY--------EARVGDELPESIDWRKKGAVAEVK 153

Query: 135 NQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYII 192
           +QG CG CW FS + AVEGI +I TG LI+LSEQ+++DC  S   GC GG MD AF +II
Sbjct: 154 DQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFII 213

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAID 251
           ++ G+  ++ YPY+  +G C+  R   K   I SY+DVPT SE +L+ AV+ QP+S+AI+
Sbjct: 214 KNGGIDTDKDYPYKGVDGTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIE 273

Query: 252 ASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRR 311
           A    F+ Y  G+F G CG  L+H V  VGYG+ N   YW+++NSWG++WGE G++RM R
Sbjct: 274 AGGRAFQLYDSGIFDGSCGTQLDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGYLRMAR 333

Query: 312 DVG-GAGLCGIARKASYPI 329
           ++   +G CGIA + SYPI
Sbjct: 334 NIASSSGKCGIAIEPSYPI 352


>gi|358348957|ref|XP_003638507.1| Cysteine proteinase [Medicago truncatula]
 gi|355504442|gb|AES85645.1| Cysteine proteinase [Medicago truncatula]
          Length = 362

 Score =  279 bits (714), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 148/341 (43%), Positives = 212/341 (62%), Gaps = 15/341 (4%)

Query: 1   MLIIMVTWASLVMSRTL--HEDSISAKHELW-MAQSARTY----KNQAEKAMRFKIFKKN 53
           +LI++     LV+S +   H+  +S+   LW + +  R++    +N  EK  RF +FK N
Sbjct: 7   LLIVLSIALVLVVSESFDFHDKDVSSDESLWDLYERWRSHHTVSRNLNEKQKRFNVFKSN 66

Query: 54  FRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD 113
              +   N+  ++ YKL LN+FAD+T+ EF  ++ G K+    +   +   +   F Y +
Sbjct: 67  VMHVHNTNKM-DKPYKLKLNKFADMTNHEFKTTYAGSKVNHHRMFRGTPRVSGT-FMYEN 124

Query: 114 SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
             +  P S+DWR +GAVT VK+QG CG CW FS V AVEGI +I+T RL+ LSEQ+++DC
Sbjct: 125 FTKA-PASVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNRLVPLSEQELIDC 183

Query: 174 SG--SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP 231
               ++GC GG M+ AF YI +  G+T E  YPY   +G C+  +  + A  I  ++ VP
Sbjct: 184 DNQENQGCNGGLMEYAFEYIKQKGGITTESYYPYTANDGSCDATKENVPAVSIDGHETVP 243

Query: 232 TS-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP- 289
            + E AL  AV+ QPVSVAIDA    F++YS GVF G CG  LNH V IVGYG++ +G  
Sbjct: 244 ANDEDALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGDCGKELNHGVAIVGYGTTVDGTN 303

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
           YW+++NSWG  WGE G+IRM+R+V    GLCGIA +ASYP+
Sbjct: 304 YWIVRNSWGAEWGEQGYIRMKRNVSNKEGLCGIAMEASYPV 344


>gi|3451077|emb|CAA20473.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|7269200|emb|CAB79307.1| cysteine proteinase-like protein [Arabidopsis thaliana]
          Length = 355

 Score =  279 bits (714), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 143/308 (46%), Positives = 197/308 (63%), Gaps = 12/308 (3%)

Query: 27  ELWMAQSARTYKNQ-AEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIA 85
           ++WM++  +TY N   EK  RF+ FK N RFI++ N + N +Y+L L  FADLT +E+  
Sbjct: 48  QMWMSKHGKTYTNALGEKERRFQNFKDNLRFIDQHNAK-NLSYQLGLTRFADLTVQEYRD 106

Query: 86  SHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIF 145
              G   P +     S+ Y       P +   LP S+DWR  GAV+ +K+QG+C  CW F
Sbjct: 107 LFPGSPKPKQRNLKTSRRYV------PLAGDQLPESVDWRQEGAVSEIKDQGTCNSCWAF 160

Query: 146 SAVAAVEGITKIRTGRLISLSEQQVLDCS-GSRGCYG-GWMDDAFSYIIRSQGLTDERVY 203
           S VAAVEG+ KI TG LISLSEQ+++DC+  + GCYG G MD AF ++I + GL  E+ Y
Sbjct: 161 STVAAVEGLNKIVTGELISLSEQELVDCNLVNNGCYGSGLMDTAFQFLINNNGLDSEKDY 220

Query: 204 PYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYSG 262
           PYQ  +G CN ++  +    I SY+DVP + E++L+ AV+ QPVSV +D  S  F  Y  
Sbjct: 221 PYQGTQGSCNRKQVHLLVITIDSYEDVPANDEISLQKAVAHQPVSVGVDKKSQEFMLYRS 280

Query: 263 GVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGI 321
            ++ GPCG NL+HA+ IVGYGS N   YW+++NSWG  WG+ G+I++ R+     GLCGI
Sbjct: 281 CIYNGPCGTNLDHALVIVGYGSENGQDYWIVRNSWGTTWGDAGYIKIARNFEDPKGLCGI 340

Query: 322 ARKASYPI 329
           A  ASYPI
Sbjct: 341 AMLASYPI 348


>gi|413953666|gb|AFW86315.1| hypothetical protein ZEAMMB73_539008 [Zea mays]
          Length = 314

 Score =  279 bits (713), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 147/327 (44%), Positives = 200/327 (61%), Gaps = 46/327 (14%)

Query: 12  VMSRTLHEDS-ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKL 70
           + +R L +DS + A+HE WMAQ +R YK+ +EKA RFK                      
Sbjct: 22  LAARDLSDDSAMVARHEQWMAQYSRVYKDASEKARRFK---------------------- 59

Query: 71  SLNEFADLTDEEF--IASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRAR 127
               FADLT+ EF  + ++ G+K     I           F Y + S   LP +IDWR +
Sbjct: 60  ----FADLTNHEFRSVKTNKGFKSSNMKILTG--------FRYENVSADALPTTIDWRTK 107

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWM 184
           G VTP+K+QG CGCC  FSAVAA EGI KI TG+L+SL++Q+++DC      +GC GG M
Sbjct: 108 GVVTPIKDQGQCGCCSAFSAVAATEGIVKISTGKLVSLADQELVDCDVHGEDQGCEGGLM 167

Query: 185 DDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSR 243
           DDAF +II++ GLT E  YPY   +G CN   G+  AA I+ Y+DVP + E AL  A++ 
Sbjct: 168 DDAFKFIIKNGGLTTESSYPYTAADGKCN--SGSNSAATIKGYEDVPANDEAALMKAMAN 225

Query: 244 QPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWG 302
           QPVSVA+D     FR+YSGGV  G CG +L+H +  +GYG +++G  YWL+KNSWG  WG
Sbjct: 226 QPVSVAVDGGDMTFRFYSGGVMTGSCGTDLDHGIAAIGYGKTSDGTKYWLMKNSWGTTWG 285

Query: 303 EGGFIRMRRDVGGA-GLCGIARKASYP 328
           E G++RM +D+    G+CG+A + SYP
Sbjct: 286 ENGYLRMEKDISDKRGMCGLAMEPSYP 312


>gi|18401614|ref|NP_564497.1| cysteine proteinase RD21a [Arabidopsis thaliana]
 gi|1172873|sp|P43297.1|RD21A_ARATH RecName: Full=Cysteine proteinase RD21a; Short=RD21; Flags:
           Precursor
 gi|12321010|gb|AAG50628.1|AC083835_13 cysteine protease, putative [Arabidopsis thaliana]
 gi|435619|dbj|BAA02374.1| thiol protease [Arabidopsis thaliana]
 gi|18175926|gb|AAL59952.1| putative cysteine proteinase RD21A [Arabidopsis thaliana]
 gi|22136972|gb|AAM91715.1| putative cysteine proteinase RD21A [Arabidopsis thaliana]
 gi|332194014|gb|AEE32135.1| cysteine proteinase RD21a [Arabidopsis thaliana]
          Length = 462

 Score =  279 bits (713), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 143/319 (44%), Positives = 204/319 (63%), Gaps = 17/319 (5%)

Query: 19  EDSISAKHELWMAQ--SARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFA 76
           E  + + +E W+ +   A++  +  EK  RF+IFK N RF+++ N E N +Y+L L  FA
Sbjct: 43  EAEVMSIYEAWLVKHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHN-EKNLSYRLGLTRFA 101

Query: 77  DLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG--LPRSIDWRARGAVTPVK 134
           DLT++E+ + + G KM  +     S  Y        ++R G  LP SIDWR +GAV  VK
Sbjct: 102 DLTNDEYRSKYLGAKMEKKGERRTSLRY--------EARVGDELPESIDWRKKGAVAEVK 153

Query: 135 NQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYII 192
           +QG CG CW FS + AVEGI +I TG LI+LSEQ+++DC  S   GC GG MD AF +II
Sbjct: 154 DQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFII 213

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAID 251
           ++ G+  ++ YPY+  +G C+  R   K   I SY+DVPT SE +L+ AV+ QP+S+AI+
Sbjct: 214 KNGGIDTDKDYPYKGVDGTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIE 273

Query: 252 ASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRR 311
           A    F+ Y  G+F G CG  L+H V  VGYG+ N   YW+++NSWG++WGE G++RM R
Sbjct: 274 AGGRAFQLYDSGIFDGSCGTQLDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGYLRMAR 333

Query: 312 DVG-GAGLCGIARKASYPI 329
           ++   +G CGIA + SYPI
Sbjct: 334 NIASSSGKCGIAIEPSYPI 352


>gi|162459393|ref|NP_001105993.1| cysteine protease component of protease-inhibitor complex precursor
           [Zea mays]
 gi|6682829|dbj|BAA88898.1| cysteine protease component of protease-inhibitor complex [Zea
           mays]
          Length = 465

 Score =  279 bits (713), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 143/309 (46%), Positives = 200/309 (64%), Gaps = 15/309 (4%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEFADLTDEEFIA 85
           WMA   RTY    E+  R+++F+ N R+I+  N     G  +++L LN FADLT++E+ A
Sbjct: 47  WMAAHGRTYNAVGEEERRYQVFRDNLRYIDAHNAAADAGVHSFRLGLNRFADLTNDEYRA 106

Query: 86  SHTGYKM-PTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWI 144
           ++ G +  P R     ++ +A +          LP S+DWRA+GAV  VK+QGS G CW 
Sbjct: 107 TYLGARTRPQRERKLGARYHAAD-------NEDLPESVDWRAKGAVAEVKDQGSYGSCWA 159

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERV 202
           FS +AAVEGI +I TG LISLSEQ+++DC  S  +GC GG MD AF +II + G+  E+ 
Sbjct: 160 FSTIAAVEGINQIVTGDLISLSEQELVDCDTSYNQGCNGGLMDYAFEFIINNGGIDTEKD 219

Query: 203 YPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYS 261
           YPY+  +G C+  R   K   I SY+DVP + E +L+ AV+ QPVSVAI+A+   F+ YS
Sbjct: 220 YPYKGTDGRCDVNRKNAKVVTIDSYEDVPANDEKSLQKAVANQPVSVAIEAAGTQFQLYS 279

Query: 262 GGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV-GGAGLCG 320
            G+F G CG  L+H VT VGYG+ N   YW++KNSWG +WGE G++RM R++   +G CG
Sbjct: 280 SGIFTGSCGTALDHGVTAVGYGTENGKDYWIVKNSWGSSWGESGYVRMERNIKASSGKCG 339

Query: 321 IARKASYPI 329
           IA + SYP+
Sbjct: 340 IAVEPSYPL 348


>gi|326430490|gb|EGD76060.1| cysteine proteinase [Salpingoeca sp. ATCC 50818]
          Length = 448

 Score =  279 bits (713), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 148/341 (43%), Positives = 207/341 (60%), Gaps = 24/341 (7%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKH----ELWMAQSARTYKNQAEKAMRFKIFKKNFRF 56
           M++ +V   +LV +      S++       + +  +  + Y++  E+A RF +F +N  F
Sbjct: 1   MMLKLVLVCALVGAAMAEPLSLTVNKGRLFDAFKTKFNKVYESAEEEARRFSVFSQNIDF 60

Query: 57  IEKFNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD 113
           I + N E   G  T+ + +N+FADLT+EE+   +     PT  +  + Q     W   P+
Sbjct: 61  INRHNAEAARGVHTHTVDVNQFADLTNEEYRQLYL-RPYPTELLGRERQEV---WLDGPN 116

Query: 114 SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
           +      S+DWR +GAVTP+KNQG CG CW FS   +VEG   I TG L+SLSEQQ++DC
Sbjct: 117 AG-----SVDWRQKGAVTPIKNQGQCGSCWSFSTTGSVEGAHAIATGNLVSLSEQQLVDC 171

Query: 174 SGS---RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV 230
           SGS   +GC GG MD+AF YII + GL  E+ YPY  R+G C+  + +  A  I  Y+DV
Sbjct: 172 SGSFGNQGCNGGLMDNAFKYIISNGGLDTEQDYPYTARDGVCDKSKESKHAVSISGYKDV 231

Query: 231 P-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP 289
           P  +E  L  AV + PVSVAI+A    F+ YS GVF+GPCG NL+H V +VGY S     
Sbjct: 232 PQNNEDQLAAAVEKGPVSVAIEADQQSFQMYSSGVFSGPCGTNLDHGVLVVGYTSD---- 287

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           YW++KNSWG +WG+ G+I M+R V  AG+CGIA + SYPIA
Sbjct: 288 YWIVKNSWGASWGDQGYIMMKRGVSSAGICGIAMQPSYPIA 328


>gi|14517542|gb|AAK62661.1| F2G19.31/F2G19.31 [Arabidopsis thaliana]
 gi|19548039|gb|AAL87383.1| F2G19.31/F2G19.31 [Arabidopsis thaliana]
          Length = 462

 Score =  279 bits (713), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 143/319 (44%), Positives = 204/319 (63%), Gaps = 17/319 (5%)

Query: 19  EDSISAKHELWMAQ--SARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFA 76
           E  + + +E W+ +   A++  +  EK  RF+IFK N RF+++ N E N +Y+L L  FA
Sbjct: 43  EAEVMSIYEAWLVKHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHN-EKNLSYRLGLTRFA 101

Query: 77  DLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG--LPRSIDWRARGAVTPVK 134
           DLT++E+ + + G KM  +     S  Y        ++R G  LP SIDWR +GAV  VK
Sbjct: 102 DLTNDEYRSKYLGAKMEKKGERRTSLRY--------EARVGDELPESIDWRKKGAVAEVK 153

Query: 135 NQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYII 192
           +QG CG CW FS + AVEGI +I TG LI+LSEQ+++DC  S   GC GG MD AF +II
Sbjct: 154 DQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFII 213

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAID 251
           ++ G+  ++ YPY+  +G C+  R   K   I SY+DVPT SE +L+ AV+ QP+S+AI+
Sbjct: 214 KNGGIDTDKDYPYKGVDGTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIE 273

Query: 252 ASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRR 311
           A    F+ Y  G+F G CG  L+H V  VGYG+ N   YW+++NSWG++WGE G++RM R
Sbjct: 274 AGGRAFQLYDSGIFDGSCGTQLDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGYLRMAR 333

Query: 312 DVG-GAGLCGIARKASYPI 329
           ++   +G CGIA + SYPI
Sbjct: 334 NIASSSGKCGIAIEPSYPI 352


>gi|224085750|ref|XP_002307688.1| predicted protein [Populus trichocarpa]
 gi|222857137|gb|EEE94684.1| predicted protein [Populus trichocarpa]
          Length = 436

 Score =  278 bits (712), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 140/307 (45%), Positives = 189/307 (61%), Gaps = 11/307 (3%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           E W  +  ++Y +Q E++ R K+F+ N+ F+ K N +GN +Y L+LN FADLT  EF  S
Sbjct: 30  ETWCKEHGKSYTSQEERSHRLKVFEDNYDFVTKHNSKGNSSYSLALNAFADLTHHEFKTS 89

Query: 87  HTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFS 146
             G      N+++++                +P SIDWR +G VT VK+QGSCG CW FS
Sbjct: 90  RLGLSAAPLNLAHRNLEITG-------VVGDIPASIDWRNKGVVTNVKDQGSCGACWSFS 142

Query: 147 AVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERVYP 204
           A  A+EGI KI TG L+SLSEQ++++C  S   GC GG MD AF ++I + G+  E  YP
Sbjct: 143 ATGAIEGINKIVTGSLVSLSEQELIECDKSYNDGCGGGLMDYAFQFVINNHGIDTEEDYP 202

Query: 205 YQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGG 263
           Y+ R+G CN  R   +   I  Y DVP  +E  L  AV+ QPVSV I  S   F+ YS G
Sbjct: 203 YRARDGTCNKDRMKRRVVTIDKYVDVPENNEKQLLQAVAAQPVSVGICGSERAFQMYSKG 262

Query: 264 VFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIA 322
           +F GPC  +L+HAV IVGYGS N   YW++KNSWG  WG  G++ M+R+ G + G+CGI 
Sbjct: 263 IFTGPCSTSLDHAVLIVGYGSENGVDYWIVKNSWGTGWGMRGYMHMQRNSGNSQGVCGIN 322

Query: 323 RKASYPI 329
             ASYP+
Sbjct: 323 MLASYPV 329


>gi|297744465|emb|CBI37727.3| unnamed protein product [Vitis vinifera]
          Length = 331

 Score =  278 bits (711), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 146/313 (46%), Positives = 195/313 (62%), Gaps = 32/313 (10%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D + A+ E W+++  + YK+  EK  RF++F++N   I++ N+E + +Y L LNEFADL+
Sbjct: 43  DKLIARFESWVSKHGKVYKSMEEKLHRFEVFRENLNHIDERNKEVS-SYWLGLNEFADLS 101

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
            EEF                +S+  A+           LP S+DWR +GAVT VKNQG+C
Sbjct: 102 HEEF----------------KSKDVAD-----------LPESVDWRKKGAVTHVKNQGAC 134

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGL 197
           G CW FS VAAVEGI +I TG L +LSEQ+++DC  +   GC GG MD AF++I  + GL
Sbjct: 135 GSCWAFSTVAAVEGINQIVTGNLTTLSEQELIDCDTTFNSGCNGGLMDYAFAFIASNGGL 194

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPG 256
             E  YPY   EG C  Q+  +    I  Y+DVP   E +L  A++ QP+SVAI+AS   
Sbjct: 195 HKEDDYPYLMEEGTCEEQKEDVDIVTISGYEDVPEKDEESLLKALAHQPLSVAIEASGRD 254

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA 316
           F++YSGGVF GPCG  L+H V  VGYGSS    Y ++KNSWG  WGE G+IRM+R+ G  
Sbjct: 255 FQFYSGGVFNGPCGTELDHGVAAVGYGSSKGLDYIIVKNSWGPKWGEKGYIRMKRNTGKT 314

Query: 317 -GLCGIARKASYP 328
            GLCGI + ASYP
Sbjct: 315 EGLCGINKMASYP 327


>gi|116781957|gb|ABK22314.1| unknown [Picea sitchensis]
          Length = 369

 Score =  278 bits (711), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 154/318 (48%), Positives = 205/318 (64%), Gaps = 15/318 (4%)

Query: 19  EDSISAKHELWMAQ--SARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFA 76
           E S+ + ++ W  Q  S+R+  ++ E A RF+IFK+N ++I+  N++ +  YKL LN+FA
Sbjct: 39  EKSLRSLYDNWALQHRSSRSLDSE-EHAERFEIFKENVKYIDSVNKK-DSPYKLGLNKFA 96

Query: 77  DLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQ 136
           DL++EEF A + G KM  R      +   +  F Y +S   LP SIDWR +GAV  VKNQ
Sbjct: 97  DLSNEEFKAIYMGTKMDLRG----DREVQSGSFMYQNSEP-LPASIDWRQKGAVAAVKNQ 151

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-GCYGGWMDDAFSYIIRSQ 195
           G CG CW FS VA+VEGI  I TG L+SLSEQQ++DCS    GC GG MD AF YII + 
Sbjct: 152 GHCGSCWAFSTVASVEGINYITTGNLVSLSEQQLVDCSTENSGCNGGLMDTAFQYIINNG 211

Query: 196 GLTDERVYPYQRREGYCNWQRGAMKAAR--IRSYQDVP-TSELALRYAVSRQPVSVAIDA 252
           G+  E  YPY      C+  +   +  R  I  ++DVP  +E AL+ AV+ QPVSVAI+A
Sbjct: 212 GIVTEDNYPYTAEATECSSTKINSQTTRVVIDGFEDVPANNEQALKEAVAHQPVSVAIEA 271

Query: 253 SSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRR 311
           S   F++YS GVF G CG  L+H V  VGYG+S EG  YW+++NSWG  WGE G+IRM++
Sbjct: 272 SGQDFQFYSTGVFTGKCGTALDHGVVAVGYGTSPEGINYWIVRNSWGPKWGEEGYIRMQQ 331

Query: 312 DVGGA-GLCGIARKASYP 328
            +  A G CGIA +ASYP
Sbjct: 332 GIEAAEGKCGIAMQASYP 349


>gi|50355615|dbj|BAD29956.1| cysteine protease [Daucus carota]
          Length = 423

 Score =  278 bits (711), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 139/304 (45%), Positives = 195/304 (64%), Gaps = 11/304 (3%)

Query: 30  MAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTG 89
           + +  + Y     K  RF+IFK N RFI++ N+  NQ++KL LN+FADL++EE+ +   G
Sbjct: 11  LVKHHKNYNALGAKEKRFEIFKDNLRFIDEHNKGVNQSFKLGLNKFADLSNEEYKSMFLG 70

Query: 90  YKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVA 149
            +M       +S  +    +G  D    LP+S+DWR +GAV PVK+QG CG CW FS VA
Sbjct: 71  GRMVRDRKGFESDRFK---YGVGDE---LPQSVDWREKGAVAPVKDQGQCGSCWAFSTVA 124

Query: 150 AVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQR 207
           AVEGI +I TG LISLSEQ+++DC    ++GC GG+MD AF +I+++ G+  E  YPY+ 
Sbjct: 125 AVEGINQIATGDLISLSEQELVDCDKGFNQGCNGGFMDYAFEFIVKNGGIDTEDDYPYKG 184

Query: 208 REGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFA 266
            +G C+  R   K   I  ++DVP   E +L+ AV+ QPVSVAI+A    F+ Y  G+F 
Sbjct: 185 VDGQCDQNRKNAKVVTINGFEDVPQNDEKSLKKAVAHQPVSVAIEAGGRAFQLYESGIFN 244

Query: 267 GPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG--GAGLCGIARK 324
           G CG +L+H V  VGYG+ +   YW+++NSWG NWGE G+IR+ R+V     G CGIA +
Sbjct: 245 GLCGTDLDHGVVAVGYGTEDGKDYWIVRNSWGPNWGENGYIRLERNVASTNTGKCGIAMQ 304

Query: 325 ASYP 328
            SYP
Sbjct: 305 PSYP 308


>gi|168057475|ref|XP_001780740.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667829|gb|EDQ54449.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 463

 Score =  278 bits (711), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 152/320 (47%), Positives = 210/320 (65%), Gaps = 17/320 (5%)

Query: 17  LH-EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEF 75
           LH +D+I      W+   +R Y++ +EK  RF+IFK+NF +I   N++  ++Y L LN+F
Sbjct: 39  LHSDDAILDVFHQWLETHSRVYRSLSEKHHRFQIFKENFLYIHAHNKQ-QKSYWLGLNKF 97

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
           +DLT +EF A + G K P     N+ +  AN  F Y D     P+ +DWR +GAVT VK+
Sbjct: 98  SDLTHQEFRAQYLGTK-PV----NRQRKEAN--FMYEDVE-AEPK-VDWRLKGAVTDVKD 148

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYIIR 193
           QG+CG CW FSAV +VEG+  I+TG L+SLSEQ+++DC    ++GC GG MD AF +II+
Sbjct: 149 QGACGSCWAFSAVGSVEGVNAIKTGELVSLSEQELVDCDRKQNQGCNGGLMDYAFEFIIK 208

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDA 252
           + G+  E+ YPY+ R+G C+  R   K   I  YQDVPT SE AL  A+++ PVSVAI+A
Sbjct: 209 NGGIDTEKDYPYKARDGRCDEGRRNSKVVVIDDYQDVPTQSESALMKALTKNPVSVAIEA 268

Query: 253 SSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRR 311
               F++Y GGVF GPCG+ L+H V  VGYG+ ++G  YW++KNSWG  WGE G+IRM R
Sbjct: 269 GGRDFQHYQGGVFTGPCGSELDHGVLAVGYGTDDDGVNYWIVKNSWGPGWGEKGYIRMER 328

Query: 312 --DVGGAGLCGIARKASYPI 329
                  G CGI  +AS+PI
Sbjct: 329 FGSDSTDGKCGINIEASFPI 348


>gi|222425026|dbj|BAH20463.1| cysteine protease [Spinacia oleracea]
          Length = 473

 Score =  278 bits (711), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 142/328 (43%), Positives = 203/328 (61%), Gaps = 9/328 (2%)

Query: 10  SLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYK 69
           +L+ S +  +D +   +E W+ Q  + Y    EK  RF IFK N  FI++ N + +QT+K
Sbjct: 37  NLLPSSSRSDDEVMRIYESWLVQHRKNYNALGEKEKRFAIFKDNLEFIDQHNSDDSQTFK 96

Query: 70  LSLNEFADLTDEEFIASHTG---YKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRA 126
           + LN+FADLT+EEF + + G       +  +S+      ++ + + +    LP ++DWR 
Sbjct: 97  VGLNKFADLTNEEFRSVYLGRKKSSSSSPLLSSAKSKVKSDRYLFKEGDE-LPEAVDWRK 155

Query: 127 RGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWM 184
            GAV  VK+QG CG CW FS +AAVEGI +I TG L+SLSEQ+++DC  S   GC GG M
Sbjct: 156 NGAVAKVKDQGQCGSCWAFSTIAAVEGINQIVTGELLSLSEQELVDCDTSYNSGCDGGLM 215

Query: 185 DDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSR 243
           D A+ +II + G+  +  YPY  ++G C+  R   K   I  ++DVP   E AL+ AV+ 
Sbjct: 216 DYAYEFIINNGGIDTDADYPYTAKDGKCDQYRKNAKVVTIDDFEDVPENDEKALQKAVAH 275

Query: 244 QPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGE 303
           QPVSVAI+A    F++Y  GVF G CG +L+H V  VGYGS +   YW+++NSWG +WGE
Sbjct: 276 QPVSVAIEAGGSTFQFYQSGVFTGKCGADLDHGVVAVGYGSDDGKDYWIVRNSWGADWGE 335

Query: 304 GGFIRMRRDVGG--AGLCGIARKASYPI 329
            G+IRM R++     G CGIA + SYPI
Sbjct: 336 SGYIRMERNLETVKTGKCGIAIEPSYPI 363


>gi|449438381|ref|XP_004136967.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus]
          Length = 479

 Score =  278 bits (711), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 146/317 (46%), Positives = 196/317 (61%), Gaps = 14/317 (4%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           ++ ++A +E W+    + Y    EK  RF+IFK N RFI++ NRE ++TYK+ L  FADL
Sbjct: 55  DEEVAALYESWLVHHGKAYNAIGEKERRFEIFKDNLRFIDEHNRE-SRTYKVGLTRFADL 113

Query: 79  TDEEFIASHTG--YKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQ 136
           T+EE+ A   G  +    R  + +S  YA            LP  +DWR +GAV  VK+Q
Sbjct: 114 TNEEYRARFLGGRFSRKPRLSAAKSGRYAAAL------GDDLPDDVDWRKKGAVATVKDQ 167

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRS 194
           G CG CW FS+VAAVEGI +I TG LI LSEQ+++DC  S   GC GG MD AF +II +
Sbjct: 168 GQCGSCWAFSSVAAVEGINQIVTGELIPLSEQELVDCDKSFNMGCNGGLMDYAFQFIIGN 227

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDAS 253
            G+  E  YPY+ R+  C+  R   K   I  Y+DVP   E +L+ AV+ QPVSVAI+A 
Sbjct: 228 GGIDTEEDYPYKGRDAACDPNRKNAKVVTIDGYEDVPENDESSLKKAVANQPVSVAIEAG 287

Query: 254 SPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV 313
              F+ Y  GVF G CG +L+H V  VGYG+ N   YW+++NSWG++WGE G+IR+ R+V
Sbjct: 288 GRAFQLYQSGVFTGRCGTDLDHGVVAVGYGTDNGTDYWIVRNSWGKDWGESGYIRLERNV 347

Query: 314 GG--AGLCGIARKASYP 328
                G CGIA + SYP
Sbjct: 348 ANITTGKCGIAVQPSYP 364


>gi|297802228|ref|XP_002868998.1| cysteine proteinase [Arabidopsis lyrata subsp. lyrata]
 gi|297314834|gb|EFH45257.1| cysteine proteinase [Arabidopsis lyrata subsp. lyrata]
          Length = 375

 Score =  278 bits (710), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 146/298 (48%), Positives = 194/298 (65%), Gaps = 15/298 (5%)

Query: 42  EKAMRFKIFKKNFRFIEKFNREG-NQTYKLSLNEFADLTDEEFIASHTGYKM-PTRNIS- 98
           ++  RF IFK N RFI+  N +  N TYKL L +F DLT+EE+ + + G +  P R I+ 
Sbjct: 69  DQDKRFNIFKDNLRFIDLHNEKNKNATYKLGLTKFTDLTNEEYRSLYLGARTEPVRRIAK 128

Query: 99  --NQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITK 156
             N +Q Y+    G     + +P ++DWR +GAV P+K+QG+CG CW FS  AAVEGI K
Sbjct: 129 AKNVNQKYSAAVDG-----KEVPETVDWRLKGAVNPIKDQGTCGSCWAFSTAAAVEGINK 183

Query: 157 IRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNW 214
           I TG LISLSEQ+++DC  S  +GC GG MD AF +I+++ GL  E+ YPY+   G CN 
Sbjct: 184 IVTGELISLSEQELVDCDNSYNQGCNGGLMDYAFQFIMKNGGLKTEKDYPYRGFGGKCNS 243

Query: 215 QRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNL 273
                K   I  Y+DVPT  E AL+ A+S QPVSVAI+A    F++Y  G+F G CG NL
Sbjct: 244 FLKNAKVVSIDGYEDVPTKDETALKRAISLQPVSVAIEAGGRIFQHYQTGIFTGNCGTNL 303

Query: 274 NHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG--AGLCGIARKASYPI 329
           +HAV  VGYGS N   YW+++NSWG  WGE G+IRM R++    +G CGIA +ASYP+
Sbjct: 304 DHAVVAVGYGSENGVDYWIVRNSWGPRWGEEGYIRMERNLASSKSGKCGIAVEASYPV 361


>gi|42567068|ref|NP_567686.2| putative cysteine proteinase [Arabidopsis thaliana]
 gi|332659371|gb|AEE84771.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 356

 Score =  278 bits (710), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 145/309 (46%), Positives = 197/309 (63%), Gaps = 13/309 (4%)

Query: 27  ELWMAQSARTYKNQ-AEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIA 85
           ++WM++  +TY N   EK  RF+ FK N RFI++ N + N +Y+L L  FADLT +E+  
Sbjct: 48  QMWMSKHGKTYTNALGEKERRFQNFKDNLRFIDQHNAK-NLSYQLGLTRFADLTVQEYRD 106

Query: 86  SHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIF 145
              G   P +     S+ Y       P +   LP S+DWR  GAV+ +K+QG+C  CW F
Sbjct: 107 LFPGSPKPKQRNLKTSRRYV------PLAGDQLPESVDWRQEGAVSEIKDQGTCNSCWAF 160

Query: 146 SAVAAVEGITKIRTGRLISLSEQQVLDCS-GSRGCYG-GWMDDAFSYIIRSQGLTDERVY 203
           S VAAVEG+ KI TG LISLSEQ+++DC+  + GCYG G MD AF ++I + GL  E+ Y
Sbjct: 161 STVAAVEGLNKIVTGELISLSEQELVDCNLVNNGCYGSGLMDTAFQFLINNNGLDSEKDY 220

Query: 204 PYQRREGYCN-WQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYS 261
           PYQ  +G CN  Q  + K   I SY+DVP + E++L+ AV+ QPVSV +D  S  F  Y 
Sbjct: 221 PYQGTQGSCNRKQSTSNKVITIDSYEDVPANDEISLQKAVAHQPVSVGVDKKSQEFMLYR 280

Query: 262 GGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCG 320
             ++ GPCG NL+HA+ IVGYGS N   YW+++NSWG  WG+ G+I++ R+     GLCG
Sbjct: 281 SCIYNGPCGTNLDHALVIVGYGSENGQDYWIVRNSWGTTWGDAGYIKIARNFEDPKGLCG 340

Query: 321 IARKASYPI 329
           IA  ASYPI
Sbjct: 341 IAMLASYPI 349


>gi|167521499|ref|XP_001745088.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776702|gb|EDQ90321.1| predicted protein [Monosiga brevicollis MX1]
          Length = 294

 Score =  277 bits (709), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 144/303 (47%), Positives = 189/303 (62%), Gaps = 22/303 (7%)

Query: 34  ARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIASHTGY 90
           +++Y+++A +A R   F+ N  FI K N E   G  +Y + +NEFADLT +EF+A +   
Sbjct: 6   SKSYESEAVEAKRLAAFEANLEFINKHNAEHAQGLHSYTVGVNEFADLTIDEFMALYVPS 65

Query: 91  KMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAA 150
           K       N++  Y  N    P +      S+DWR +GAVTP+KNQG CG CW FS   +
Sbjct: 66  KF------NRTMPY--NTVYLPATSE---DSVDWRTKGAVTPIKNQGQCGSCWSFSTTGS 114

Query: 151 VEGITKIRTGRLISLSEQQVLDCSGS---RGCYGGWMDDAFSYIIRSQGLTDERVYPYQR 207
            EG   I TG L+SLSEQQ++DCSGS   +GC GG MDDAF YII ++GL  E  YPY  
Sbjct: 115 TEGAHAIATGNLVSLSEQQLVDCSGSFGNQGCNGGLMDDAFKYIISNKGLDTEEDYPYTA 174

Query: 208 REGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFA 266
           ++G CN ++ A  AA I SY DVP  +E  L  AV++ PVSVAI+A   GF+ Y  GVF 
Sbjct: 175 QDGTCNKEKEAKHAATISSYSDVPKNNEDQLAAAVAKGPVSVAIEADQSGFQLYKSGVFD 234

Query: 267 GPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKAS 326
           G CG NL+H V +VGY       YW++KNSWG  WG  G+I M+R V  +G+CGIA + S
Sbjct: 235 GNCGTNLDHGVLVVGYTDD----YWIVKNSWGTTWGVEGYINMKRGVSASGICGIAMQPS 290

Query: 327 YPI 329
           YPI
Sbjct: 291 YPI 293


>gi|226529105|ref|NP_001150196.1| cysteine protease 1 precursor [Zea mays]
 gi|194701798|gb|ACF84983.1| unknown [Zea mays]
 gi|194704800|gb|ACF86484.1| unknown [Zea mays]
 gi|195637480|gb|ACG38208.1| cysteine protease 1 precursor [Zea mays]
 gi|413919895|gb|AFW59827.1| cysteine protease 1 [Zea mays]
          Length = 470

 Score =  277 bits (709), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 138/320 (43%), Positives = 203/320 (63%), Gaps = 14/320 (4%)

Query: 19  EDSISAKHELWMAQSARTY----KNQAEKAMRFKIFKKNFRFIEKFN-REGNQTYKLSLN 73
           E  + A ++LW+A+  R Y    + + E+  RF +F  N RF++  N R G + ++L +N
Sbjct: 50  EPEVRAMYDLWLAEHGRAYNALGEGEGERDRRFLVFWDNLRFVDAHNERAGARGFRLGMN 109

Query: 74  EFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPV 133
           +FADLT++EF A++ G  +P    + +  +     + +  +   LP S+DWR +GAV PV
Sbjct: 110 QFADLTNDEFRAAYLGAMVP----AARRGAVVGERYRHDGAAEELPESVDWREKGAVAPV 165

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSY 190
           KNQG CG CW FSAV++VE + +I TG +++LSEQ++++CS   G+ GC GG MD AF +
Sbjct: 166 KNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECSTDGGNSGCNGGLMDAAFDF 225

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVA 249
           II++ G+  E  YPY+  +G C+  R   +   I  ++DVP   E +L+ AV+ QPVSVA
Sbjct: 226 IIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDEKSLQKAVAHQPVSVA 285

Query: 250 IDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRM 309
           I+A    F+ Y  GVF+G C  NL+H V  VGYG+ N   YW+++NSWG  WGE G+IRM
Sbjct: 286 IEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVRNSWGPKWGEAGYIRM 345

Query: 310 RRDVGGA-GLCGIARKASYP 328
            R+V  + G CGIA  ASYP
Sbjct: 346 ERNVNASTGKCGIAMMASYP 365


>gi|18141283|gb|AAL60579.1|AF454957_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 460

 Score =  277 bits (709), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 150/338 (44%), Positives = 204/338 (60%), Gaps = 17/338 (5%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAK-HELWMAQSARTYKNQA----EKAMRFKIFKKNFR 55
           M II       + +     D+  A+ +E WM +  +  ++      EK  RF+IFK N R
Sbjct: 23  MSIISYDEKHHITAENERSDAEVARIYEAWMEKHGKKAQSNGLVGEEKDQRFEIFKDNLR 82

Query: 56  FIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSR 115
           FI++ N + N +YKL L  FADLT+EE+ + + G K   R +   S  Y       P   
Sbjct: 83  FIDEHNNK-NLSYKLGLTRFADLTNEEYRSIYLGAKSKKR-VLKTSDRYQ------PRVG 134

Query: 116 RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG 175
             +P S+DWR  GAV  VK+QGSCG CW FS + AVEGI KI TG LISLSEQ+++DC  
Sbjct: 135 DAIPDSVDWRKEGAVAAVKDQGSCGSCWAFSTIGAVEGINKIVTGDLISLSEQELVDCDT 194

Query: 176 S--RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-T 232
           S  +GC GG MD AF +II++ G+  E  YPY+  +G C+  R   K   I +Y+DVP  
Sbjct: 195 SYNQGCNGGLMDYAFEFIIKNGGIDTEEDYPYKAADGRCDQTRKNAKVVTIDAYEDVPEN 254

Query: 233 SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWL 292
           +E AL+  ++ QP+SVAI+A    F+ YS GVF G CG  L+H V  VGYG+ N   YW+
Sbjct: 255 NEAALKKTLANQPISVAIEAGGRAFQLYSSGVFDGICGTELDHGVVAVGYGTENGKDYWI 314

Query: 293 IKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
           ++NSWG +WGE G+I+M R++    G CGIA +ASYPI
Sbjct: 315 VRNSWGGSWGESGYIKMARNIAEPTGKCGIAMEASYPI 352


>gi|359359213|gb|AEV41117.1| putative oryzain beta chain precursor [Oryza officinalis]
          Length = 465

 Score =  277 bits (709), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 141/316 (44%), Positives = 198/316 (62%), Gaps = 13/316 (4%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN-REGNQTYKLSLNEFAD 77
           E    A ++LW+A++ R+Y    E   RF++F  N RF +  N R  +  ++L +N FAD
Sbjct: 47  EAEARAAYDLWLAENGRSYNALGEHERRFRVFWDNLRFADAHNARADDHGFRLGMNRFAD 106

Query: 78  LTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQG 137
           LT+EEF A+  G K+  R+ +   + Y +      D    LP S+DWR +GAV PVKNQG
Sbjct: 107 LTNEEFRATFLGAKVVERSRA-AGERYRH------DGVEELPESVDWREKGAVAPVKNQG 159

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---RGCYGGWMDDAFSYIIRS 194
            CG CW FSAV+ VE I ++ TG +I+LSEQ++++CS +    GC GG MDDAF +II++
Sbjct: 160 QCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFIIKN 219

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDAS 253
            G+  E  YPY+  +G C+  R   K   I  ++DVP   E +L+ AV+ QPVSVAI+A 
Sbjct: 220 GGIDTEDDYPYKAVDGKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAG 279

Query: 254 SPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV 313
              F+ Y  GVF+G CG +L+H V  VGYG+ N   YW+++NSWG  WGE G++RM R++
Sbjct: 280 GREFQLYHSGVFSGRCGTSLDHGVVAVGYGTDNGKDYWIVRNSWGPKWGESGYVRMERNI 339

Query: 314 G-GAGLCGIARKASYP 328
               G CGIA  ASYP
Sbjct: 340 NVTTGKCGIAMMASYP 355


>gi|357167707|ref|XP_003581294.1| PREDICTED: actinidain-like [Brachypodium distachyon]
          Length = 358

 Score =  277 bits (709), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 148/325 (45%), Positives = 200/325 (61%), Gaps = 25/325 (7%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTD 80
           +++++HE WMA+  R+Y +  EKA R ++F  N R ++  NR GN+TY L LN+F+DLTD
Sbjct: 37  TMASRHERWMARFGRSYTDAGEKARRQEVFGANARHVDAVNRAGNRTYTLGLNQFSDLTD 96

Query: 81  EEFIASHTGYK---------MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVT 131
            EF+  H GY          +P   +  ++ +      GY      +P S+DWRA+GAVT
Sbjct: 97  HEFLQQHLGYGRHHGQRGLLLPEEEVMPKATA-----LGYGQD---MPYSVDWRAKGAVT 148

Query: 132 PVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-GCYGGWMDDAFSY 190
            +KNQ SCG CW F+AVAA EG+ KI TG LIS+SEQQVLDC+G R  C  G++ DA  Y
Sbjct: 149 EIKNQRSCGSCWAFAAVAATEGLVKIATGNLISMSEQQVLDCTGDRSSCDSGYISDALRY 208

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAM--KAARIRSYQ--DVPTSELALRYAVSRQPV 246
           ++ S GL  E  Y Y  ++G C  +R A    AA +       +   E AL+   +RQPV
Sbjct: 209 VVTSGGLQREAAYAYTGQKGACGSRRFARPNSAASVGGVHMATLNGDEGALQGLAARQPV 268

Query: 247 SVAIDASSPGFRYYSGGVFAG--PCGNNLNHAVTIVGYGSSN-EGPYWLIKNSWGQNWGE 303
           +V ++AS P FR+YS GV+AG   CG  LNHA+T+VGYG+ N  G YWL+KN WG  WGE
Sbjct: 269 AVIVEASEPDFRHYSSGVYAGSASCGRELNHALTVVGYGTENGAGEYWLVKNQWGTWWGE 328

Query: 304 GGFIRMRRDVGGAGLCGIARKASYP 328
            G++R+ R  G    CGIA  A YP
Sbjct: 329 NGYMRVARRNGAGANCGIASVAFYP 353


>gi|2160175|gb|AAB60738.1| Strong similarity to Dianthus cysteine proteinase (gb|U17135)
           [Arabidopsis thaliana]
          Length = 416

 Score =  277 bits (709), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 148/323 (45%), Positives = 198/323 (61%), Gaps = 21/323 (6%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D IS   + W  +  +TY ++ E+  R +IFK N  F+ + N   N TY LSLN FADLT
Sbjct: 24  DDISELFDDWCQKHGKTYGSEEERQQRIQIFKDNHDFVTQHNLITNATYSLSLNAFADLT 83

Query: 80  DEEFIASHTGYKM--PTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQG 137
             EF AS  G  +  P+  ++++ QS   +          +P S+DWR +GAVT VK+QG
Sbjct: 84  HHEFKASRLGLSVSAPSVIMASKGQSLGGS--------VKVPDSVDWRKKGAVTNVKDQG 135

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQ 195
           SCG CW FSA  A+EGI +I TG LISLSEQ+++DC  S   GC GG MD AF ++I++ 
Sbjct: 136 SCGACWSFSATGAMEGINQIVTGDLISLSEQELIDCDKSYNAGCNGGLMDYAFEFVIKNH 195

Query: 196 GLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASS 254
           G+  E+ YPYQ R+G C   +   K   I SY  V ++ E AL  AV+ QPVSV I  S 
Sbjct: 196 GIDTEKDYPYQERDGTCKKDKLKQKVVTIDSYAGVKSNDEKALMEAVAAQPVSVGICGSE 255

Query: 255 PGFRYYSG-------GVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFI 307
             F+ YS        G+F+GPC  +L+HAV IVGYGS N   YW++KNSWG++WG  GF+
Sbjct: 256 RAFQLYSSKFYLLMQGIFSGPCSTSLDHAVLIVGYGSQNGVDYWIVKNSWGKSWGMDGFM 315

Query: 308 RMRRDVGGA-GLCGIARKASYPI 329
            M+R+   + G+CGI   ASYPI
Sbjct: 316 HMQRNTENSDGVCGINMLASYPI 338


>gi|357154164|ref|XP_003576692.1| PREDICTED: vignain-like [Brachypodium distachyon]
          Length = 427

 Score =  277 bits (708), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 142/311 (45%), Positives = 195/311 (62%), Gaps = 8/311 (2%)

Query: 25  KHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFI 84
           + E WM +  R Y N  EK  RF+++K+N   IE+FN  G   Y L+ N+FADLT+EEF 
Sbjct: 118 RFEQWMGKHGRAYANGGEKQRRFEVYKENLALIEEFNS-GGHGYTLTDNKFADLTNEEFR 176

Query: 85  ASHTGYKMPTRNISNQSQSYANNWFGYP--DSRRGLPRSIDWRARGAVTPVKNQGSCGCC 142
           A   G  +       +   +A+N    P  D+   LP+ +DWR +GAV  VKNQGSCG C
Sbjct: 177 AKMLG-GLGADPDRRRRARHASNALELPGNDNSTDLPKDVDWRKKGAVVEVKNQGSCGSC 235

Query: 143 WIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQGLTDER 201
           W FSAVAA+EG+ +I+ G+L+SLSEQ+++DC   + GC GG+M  AF +++ + GLT E 
Sbjct: 236 WAFSAVAAMEGLNQIKNGKLVSLSEQELVDCDAEAVGCAGGFMSWAFEFVMANHGLTTEA 295

Query: 202 VYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYY 260
            YPY+   G C   +    +  I  Y +V   SE  L    + QPVSVA+DA    F+ Y
Sbjct: 296 SYPYKGINGACQTAKLNESSVSITGYVNVTVNSEAELLKVAAVQPVSVAVDAGGFLFQLY 355

Query: 261 SGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRDVG-GAGL 318
           +GGVF+GPC   +NH VT+VGYG +++   YW++KNSWG  WGE G++ M+RD G   GL
Sbjct: 356 AGGVFSGPCTAQINHGVTVVGYGETDKAEKYWIVKNSWGPEWGEAGYMLMQRDAGVPTGL 415

Query: 319 CGIARKASYPI 329
           CGIA  ASYP+
Sbjct: 416 CGIAMLASYPV 426


>gi|40806500|gb|AAR92155.1| putative cysteine protease 2 [Iris x hollandica]
          Length = 359

 Score =  277 bits (708), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 147/341 (43%), Positives = 222/341 (65%), Gaps = 16/341 (4%)

Query: 1   MLIIMVTWASLVMSRTL--HEDSISAKHELW-MAQSARTY----KNQAEKAMRFKIFKKN 53
           +L ++V  A + ++RT+  +E  ++++  LW + +  R++    ++ +EK  RF +FK+N
Sbjct: 7   LLALVVALAFVGVARTIPFNEKDLASEESLWGLYERWRSHHTVSRDLSEKNKRFNVFKEN 66

Query: 54  FRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD 113
            +FI +FN++ +  YKL LN+FAD+T++EF +++ G K+   + + +    A   F Y +
Sbjct: 67  AKFIHEFNKK-DAPYKLGLNKFADMTNQEFRSTYAGSKI-HHHRTQRGTPRATGSFMY-E 123

Query: 114 SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
           +   +P S+DWR +GAV PVK+QG CG CW FS +A+VEGI KI+T +L+ LS QQ++DC
Sbjct: 124 NVHSIPASVDWRTQGAVAPVKDQGQCGSCWAFSTIASVEGINKIKTNQLVPLSGQQLVDC 183

Query: 174 SGSR--GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP 231
              +  GC GG MD AF +I  + G+T E  YPY   +G C  +  A     I  Y+DVP
Sbjct: 184 DTDQNEGCNGGLMDYAFEFIKSNGGITSESAYPYTAEQGSCASESSA-PVVTIDGYEDVP 242

Query: 232 -TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP- 289
             +E AL  AV+ Q VSVAI+AS   F++YS GVF G CGN L+H V +VGYG++ +G  
Sbjct: 243 ANNEAALMKAVANQVVSVAIEASGMAFQFYSEGVFTGSCGNELDHGVAVVGYGATRDGTK 302

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPI 329
           YW+++NSWG  WGE G+IRM+R +    GLCGIA + SYP+
Sbjct: 303 YWIVRNSWGAEWGEKGYIRMQRGIRARHGLCGIAMEPSYPL 343


>gi|297745594|emb|CBI40759.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  277 bits (708), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 143/305 (46%), Positives = 198/305 (64%), Gaps = 15/305 (4%)

Query: 30  MAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTG 89
           M++  ++Y++  EK  RF++F+ N + I++ N++ + +Y L LNEFADL+ EEF   + G
Sbjct: 1   MSKHGKSYRSFEEKLHRFEVFQDNLKHIDETNKKVS-SYWLGLNEFADLSHEEFKRKYLG 59

Query: 90  YK--MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSA 147
            K  +P R  S +  SY +           LP+S+DWR +GAV  VKNQG+CG CW FS 
Sbjct: 60  LKIELPKRRDSPEEFSYKD--------VADLPKSVDWRKKGAVAHVKNQGACGSCWAFST 111

Query: 148 VAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSYIIRSQGLTDERVYPY 205
           VAAVEGI +I TG L +LSEQ+++DC    + GC GG MD AF++II + GL  E  YPY
Sbjct: 112 VAAVEGINQIVTGNLTALSEQELIDCDKPFNNGCNGGLMDYAFAFIISNGGLRKEEDYPY 171

Query: 206 QRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGV 264
              EG C  ++  ++   I  Y DVP  +E +   A++ QP+SVAI+ASS GF++YSGG+
Sbjct: 172 VMEEGTCGEKKEELEVVTISGYHDVPEDNEQSFLKALANQPLSVAIEASSRGFQFYSGGI 231

Query: 265 FAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIAR 323
           F G CG  L+H V  VGYG+S    Y  +KNSWG  WGE G+IRM+R+VG   G+CGI +
Sbjct: 232 FNGHCGTELDHGVAAVGYGTSKGVDYITVKNSWGSKWGEKGYIRMKRNVGKPEGICGIYK 291

Query: 324 KASYP 328
            ASYP
Sbjct: 292 MASYP 296


>gi|224102377|ref|XP_002312656.1| predicted protein [Populus trichocarpa]
 gi|222852476|gb|EEE90023.1| predicted protein [Populus trichocarpa]
          Length = 358

 Score =  277 bits (708), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 143/316 (45%), Positives = 202/316 (63%), Gaps = 11/316 (3%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           E+ +   +E W +    + ++ AEK  RF +FK+N + I K N + ++ YKL LN FAD+
Sbjct: 33  EERLRDLYERWRSHHTVS-RSLAEKQERFNVFKENLKHIHKVNHK-DRPYKLKLNSFADM 90

Query: 79  TDEEFIASHTGYKMPT-RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQG 137
           T+ EF+  + G K+   R +  Q Q   +    + D+ + LP S+DWR  GAVT +K+QG
Sbjct: 91  TNHEFLQHYGGSKVSHYRVLRGQRQGTGSM---HEDTSK-LPSSVDWRKNGAVTGIKDQG 146

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYIIRSQG 196
            CG CW FS VAAVEGI KI+TG LISLSEQ+++DC S + GC GG M+DAF++I +  G
Sbjct: 147 KCGSCWAFSTVAAVEGINKIKTGELISLSEQELVDCDSDNHGCNGGLMEDAFNFIKQIGG 206

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSP 255
           LT E  YPY+ +E  C+  +       I  Y+ VP   E AL  AV+ QPV++A+DA   
Sbjct: 207 LTSENTYPYRAKEEPCDSNKMNSPVVNIDGYEMVPENDENALMKAVANQPVAIAMDAGGK 266

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVG 314
             ++YS  +F G CG  LNH V +VGYG++ +G  YW++KNSWG +WGE G+IRM+R + 
Sbjct: 267 DLQFYSEAIFTGDCGTELNHGVALVGYGTTQDGTKYWIVKNSWGTDWGEKGYIRMQRGID 326

Query: 315 G-AGLCGIARKASYPI 329
              GLCGI  +ASYP+
Sbjct: 327 AEEGLCGITMEASYPV 342


>gi|357465603|ref|XP_003603086.1| Cysteine proteinase [Medicago truncatula]
 gi|355492134|gb|AES73337.1| Cysteine proteinase [Medicago truncatula]
          Length = 474

 Score =  277 bits (708), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 147/355 (41%), Positives = 219/355 (61%), Gaps = 29/355 (8%)

Query: 1   MLIIMVTWA----------SLVMSRTLHEDSISAK--------HELWMAQSARTYKN--Q 40
           ML+I++ +           S++     H D  S +        +E W  +  +   N   
Sbjct: 10  MLVILIVFTLFTATFALDMSIISYDKTHSDKSSRRSDKEVKNIYEEWRVKHGKLNNNIDG 69

Query: 41  AEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKM-PTRNISN 99
           +EK  RF+IFK N +FI++ N E N+TYK+ LN FADL++EE+ + + G K+ P   +  
Sbjct: 70  SEKDKRFEIFKDNLKFIDEHNAE-NRTYKVGLNRFADLSNEEYRSRYLGTKIDPIGMMMA 128

Query: 100 QSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRT 159
           ++++ +N +   P     LP+S+DWR++GAV  VK+QGSCG CW FS +AAVEGI KI T
Sbjct: 129 RTKTRSNRY--APSVGDKLPKSVDWRSQGAVVQVKDQGSCGSCWAFSTIAAVEGINKIVT 186

Query: 160 GRLISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRG 217
           G L+SLSEQ+++DC  + + GC GG M+ AF +II + G+  +  YPY+  +G C+  + 
Sbjct: 187 GELVSLSEQELVDCDRTVNAGCDGGLMEYAFEFIINNGGIDSDEDYPYRGVDGKCDQYKK 246

Query: 218 AMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHA 276
             +   I  Y+ VP   ELAL+ AV+ QP+SVAI+A    F+ Y  G+F G CG  L+H 
Sbjct: 247 NARVVSIDDYEQVPAYDELALKKAVANQPISVAIEAGGREFQLYVSGIFTGKCGTALDHG 306

Query: 277 VTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG--AGLCGIARKASYPI 329
           VT VGYG+ N   YW+++NSWG++WGE G++RM R++    AG CGI  ++SYPI
Sbjct: 307 VTAVGYGTENGVDYWIVRNSWGKSWGESGYVRMERNLAASVAGKCGIVMQSSYPI 361


>gi|58531896|gb|AAW78660.1| cysteine protease [Nicotiana tabacum]
          Length = 361

 Score =  276 bits (707), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 142/293 (48%), Positives = 190/293 (64%), Gaps = 8/293 (2%)

Query: 42  EKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQS 101
           EK  RF +FK N  ++  FN++ ++ YKL LN+FAD+T+ EF   + G K+   + S   
Sbjct: 53  EKDKRFNVFKANVHYVHNFNKK-DKPYKLKLNKFADMTNHEFRHHYAGSKI-KHHRSFLG 110

Query: 102 QSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGR 161
            S AN  F Y +    +P S+DWR +GAVTPVK+QG CG CW FS V AVEGI +I+T  
Sbjct: 111 ASRANGTFMYANVE-DVPPSVDWRKKGAVTPVKDQGKCGSCWAFSTVVAVEGINQIKTNE 169

Query: 162 LISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAM 219
           L+SLSEQ+++DC  S ++GC GG MD AF +I +  G+  E  YPY    G C+ Q+   
Sbjct: 170 LVSLSEQELVDCDTSQNQGCNGGLMDMAFEFIKKKGGINTEENYPYMAEGGECDIQKRNS 229

Query: 220 KAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVT 278
               I  Y+DV P  E +L  AV+ QPVSVAI AS   F++YS GVF G CG  L+H V 
Sbjct: 230 PVVSIDGYEDVPPNDEDSLLKAVANQPVSVAIQASGSDFQFYSEGVFTGDCGTELDHGVA 289

Query: 279 IVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
           IVGYG++ +G  YW+++NSWG  WGE G+IRM+R++    GLCGIA + SYPI
Sbjct: 290 IVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQREIDAEEGLCGIAMQPSYPI 342


>gi|46395939|sp|Q94B08.2|GCP1_ARATH RecName: Full=Germination-specific cysteine protease 1; Flags:
           Precursor
 gi|4006883|emb|CAB16767.1| cysteine proteinase [Arabidopsis thaliana]
 gi|7270637|emb|CAB80354.1| cysteine proteinase [Arabidopsis thaliana]
          Length = 376

 Score =  276 bits (707), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 148/315 (46%), Positives = 199/315 (63%), Gaps = 19/315 (6%)

Query: 29  WMAQSARTYKNQA----EKAMRFKIFKKNFRFIEKFNREG-NQTYKLSLNEFADLTDEEF 83
           W A+  +T  N      ++  RF IFK N RFI+  N +  N TYKL L +F DLT++E+
Sbjct: 52  WSAEHGKTNNNNNGIINDQDKRFNIFKDNLRFIDLHNEDNKNATYKLGLTKFTDLTNDEY 111

Query: 84  IASHTGYKM-PTRNIS---NQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
              + G +  P R I+   N +Q Y+    G     + +P ++DWR +GAV P+K+QG+C
Sbjct: 112 RKLYLGARTEPARRIAKAKNVNQKYSAAVNG-----KEVPETVDWRQKGAVNPIKDQGTC 166

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGL 197
           G CW FS  AAVEGI KI TG LISLSEQ+++DC  S  +GC GG MD AF +I+++ GL
Sbjct: 167 GSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGL 226

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPG 256
             E+ YPY+   G CN      +   I  Y+DVPT  E AL+ A+S QPVSVAI+A    
Sbjct: 227 NTEKDYPYRGFGGKCNSFLKNSRVVSIDGYEDVPTKDETALKKAISYQPVSVAIEAGGRI 286

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG- 315
           F++Y  G+F G CG NL+HAV  VGYGS N   YW+++NSWG  WGE G+IRM R++   
Sbjct: 287 FQHYQSGIFTGSCGTNLDHAVVAVGYGSENGVDYWIVRNSWGPRWGEEGYIRMERNLAAS 346

Query: 316 -AGLCGIARKASYPI 329
            +G CGIA +ASYP+
Sbjct: 347 KSGKCGIAVEASYPV 361


>gi|171702831|dbj|BAG16371.1| cysteine protease [Brassica oleracea var. italica]
          Length = 441

 Score =  276 bits (707), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 147/324 (45%), Positives = 202/324 (62%), Gaps = 18/324 (5%)

Query: 12  VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLS 71
           V SR+  E  +S  +E W+ +  +   +  EK  RF+IFK N RFI++ N + N +Y+L 
Sbjct: 30  VSSRSDAE--VSRLYEEWLVKHGKAQNSLTEKDRRFEIFKDNLRFIDEHNGK-NLSYRLG 86

Query: 72  LNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG--LPRSIDWRARGA 129
           L +FADLT++E+ + + G ++  R  +  S  Y        + R G  +P S+DWR  GA
Sbjct: 87  LTKFADLTNDEYRSMYLGSRLK-RKATKSSLRY--------EVRVGDAIPESVDWRKEGA 137

Query: 130 VTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDA 187
           V  VK+QGSCG CW FS + AVEGI KI TG LI+LSEQ+++DC  S   GC GG MD A
Sbjct: 138 VAEVKDQGSCGSCWAFSTIGAVEGINKIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYA 197

Query: 188 FSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPV 246
           F +II + G+  E  YPY+  +G C+  R   K   I  Y+DVP  SE +L+ A+S QP+
Sbjct: 198 FEFIINNGGIDTEEDYPYKGVDGRCDQTRKNAKVVTIDLYEDVPANSEESLKKALSHQPI 257

Query: 247 SVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGF 306
           SVAI+     F+ Y  G+F G CG +L+H V  VGYG+ N   YW++KNSWG +WGE G+
Sbjct: 258 SVAIEGGGRAFQLYDSGIFDGICGTDLDHGVVAVGYGTENGKDYWIVKNSWGTSWGESGY 317

Query: 307 IRMRRDVG-GAGLCGIARKASYPI 329
           IRM R++   AG CGIA + SYPI
Sbjct: 318 IRMERNIASSAGKCGIAVEPSYPI 341


>gi|18141285|gb|AAL60580.1|AF454958_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 485

 Score =  276 bits (705), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 147/324 (45%), Positives = 202/324 (62%), Gaps = 18/324 (5%)

Query: 12  VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLS 71
           V SR+  E  +S  +E W+ +  +   +  EK  RF+IFK N RFI++ N + N +Y+L 
Sbjct: 36  VSSRSDAE--VSRLYEEWLVKHGKAQNSLTEKDRRFEIFKDNLRFIDEHNGK-NLSYRLG 92

Query: 72  LNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG--LPRSIDWRARGA 129
           L +FADLT++E+ + + G ++  R  +  S  Y        + R G  +P S+DWR  GA
Sbjct: 93  LTKFADLTNDEYRSMYLGSRLK-RKATKSSLRY--------EVRVGDAIPESVDWRKEGA 143

Query: 130 VTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDA 187
           V  VK+QGSCG CW FS + AVEGI KI TG LI+LSEQ+++DC  S   GC GG MD A
Sbjct: 144 VAEVKDQGSCGSCWAFSTIGAVEGINKIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYA 203

Query: 188 FSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPV 246
           F +II + G+  E  YPY+  +G C+  R   K   I  Y+DVP  SE +L+ A+S QP+
Sbjct: 204 FEFIINNGGIDTEEDYPYKGVDGRCDQTRKNAKVVTIDLYEDVPANSEESLKKALSHQPI 263

Query: 247 SVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGF 306
           SVAI+     F+ Y  G+F G CG +L+H V  VGYG+ N   YW++KNSWG +WGE G+
Sbjct: 264 SVAIEGGGRAFQLYDSGIFDGICGTDLDHGVVAVGYGTENGKDYWIVKNSWGTSWGESGY 323

Query: 307 IRMRRDVG-GAGLCGIARKASYPI 329
           IRM R++   AG CGIA + SYPI
Sbjct: 324 IRMERNIASSAGKCGIAVEPSYPI 347


>gi|115448287|ref|NP_001047923.1| Os02g0715000 [Oryza sativa Japonica Group]
 gi|42408029|dbj|BAD09165.1| putative cysteine proteinase [Oryza sativa Japonica Group]
 gi|113537454|dbj|BAF09837.1| Os02g0715000 [Oryza sativa Japonica Group]
 gi|215737450|dbj|BAG96580.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215765786|dbj|BAG87483.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222623551|gb|EEE57683.1| hypothetical protein OsJ_08138 [Oryza sativa Japonica Group]
          Length = 366

 Score =  276 bits (705), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 147/306 (48%), Positives = 197/306 (64%), Gaps = 12/306 (3%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           W  + ++ Y +  EK  R++IFK+N R I + NR  N +Y L LN FAD+  EEF AS+ 
Sbjct: 58  WSVKHSKIYASPKEKVKRYEIFKRNLRHIVETNRR-NGSYWLGLNHFADIAHEEFKASYL 116

Query: 89  GYK--MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFS 146
           G K  +  R+    +Q + +  F Y ++   LP ++DWR +GAVTPVKNQG CG CW FS
Sbjct: 117 GLKPGLARRD----AQPHGSTTFRYANAVN-LPWAVDWRKKGAVTPVKNQGECGSCWAFS 171

Query: 147 AVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERVYP 204
            VAAVEGI +I TG+L+SLSEQ+++DC  +   GC GG MD AF+YI+ +QG+  E  YP
Sbjct: 172 TVAAVEGINQIVTGKLVSLSEQELMDCDNTFNHGCRGGLMDFAFAYIMGNQGIYTEEDYP 231

Query: 205 YQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGG 263
           Y   EGYC  ++   K   I  Y+DVP  SE +L  A++ QPVSV I A S  F++Y GG
Sbjct: 232 YLMEEGYCREKQPHSKVITITGYEDVPANSETSLLKALAHQPVSVGIAAGSRDFQFYKGG 291

Query: 264 VFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIA 322
           +F G CG   +HA+T VGYGS     Y ++KNSWG+NWGE G+ R+RR  G   G+C I 
Sbjct: 292 IFDGECGIQPDHALTAVGYGSYYGQDYIIMKNSWGKNWGEQGYFRIRRGTGKPEGVCDIY 351

Query: 323 RKASYP 328
           + ASYP
Sbjct: 352 KIASYP 357


>gi|18396952|ref|NP_564322.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|332192922|gb|AEE31043.1| cysteine proteinase-like protein [Arabidopsis thaliana]
          Length = 334

 Score =  276 bits (705), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 149/322 (46%), Positives = 205/322 (63%), Gaps = 24/322 (7%)

Query: 16  TLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEF 75
           TL+E SI   H+ WM Q +R YK+++EK MR K+FKKN +FIE FN  GNQ+Y L +NEF
Sbjct: 28  TLNEQSIVDYHQQWMTQFSRVYKDESEKEMRLKVFKKNLKFIENFNNMGNQSYTLGVNEF 87

Query: 76  ADLTDEEFIASHTGYKMPTRNIS---NQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTP 132
            D   EEF+A+HTG ++   ++S   N+++   N      D       S DWR  GAVTP
Sbjct: 88  TDWKTEEFLATHTGLRVNVTSLSELFNKTKPSRNWNMSDIDME---DESKDWRDEGAVTP 144

Query: 133 VKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR--GCYGGWMDDAFSY 190
           VK QG+C              +TKI    L++LSEQQ++DC   +  GC GG  ++AF Y
Sbjct: 145 VKYQGAC-------------RLTKISGKNLLTLSEQQLIDCDIEKNGGCNGGEFEEAFKY 191

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVA 249
           II++ G++ E  YPYQ ++  C          +IR +Q VP+ +E AL  AV RQPVSV 
Sbjct: 192 IIKNGGVSLETEYPYQVKKESCRANARRAPHTQIRGFQMVPSHNERALLEAVRRQPVSVL 251

Query: 250 IDASSPGFRYYSGGVFAG-PCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIR 308
           IDA +  F +Y GGV+AG  CG ++NHAVTIVGYG+ +   YW++KNSWG++WGE G++R
Sbjct: 252 IDARADSFGHYKGGVYAGLDCGTDVNHAVTIVGYGTMSGLNYWVLKNSWGESWGENGYMR 311

Query: 309 MRRDVG-GAGLCGIARKASYPI 329
           +RRDV    G+CGIA+ A+YP+
Sbjct: 312 IRRDVEWPQGMCGIAQVAAYPV 333


>gi|186516984|ref|NP_195406.2| cysteine proteinase1 [Arabidopsis thaliana]
 gi|15290508|gb|AAK92229.1| cysteine proteinase [Arabidopsis thaliana]
 gi|332661313|gb|AEE86713.1| cysteine proteinase1 [Arabidopsis thaliana]
          Length = 376

 Score =  275 bits (704), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 148/325 (45%), Positives = 203/325 (62%), Gaps = 19/325 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQA----EKAMRFKIFKKNFRFIEKFNREG-NQTYKLSLN 73
           ++ + + +  W A+  +T  N      ++  RF IFK N RFI+  N    N TYKL L 
Sbjct: 42  DEEVRSIYLQWSAEHGKTNNNNNGIINDQDKRFNIFKDNLRFIDLHNENNKNATYKLGLT 101

Query: 74  EFADLTDEEFIASHTGYKM-PTRNIS---NQSQSYANNWFGYPDSRRGLPRSIDWRARGA 129
           +F DLT++E+   + G +  P R I+   N +Q Y+    G     + +P ++DWR +GA
Sbjct: 102 KFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNG-----KEVPETVDWRQKGA 156

Query: 130 VTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDA 187
           V P+K+QG+CG CW FS  AAVEGI KI TG LISLSEQ+++DC  S  +GC GG MD A
Sbjct: 157 VNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDKSYNQGCNGGLMDYA 216

Query: 188 FSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPV 246
           F +I+++ GL  E+ YPY+   G CN      +   I  Y+DVPT  E AL+ A+S QPV
Sbjct: 217 FQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRVVSIDGYEDVPTKDETALKKAISYQPV 276

Query: 247 SVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGF 306
           SVAI+A    F++Y  G+F G CG NL+HAV  VGYGS N   YW+++NSWG  WGE G+
Sbjct: 277 SVAIEAGGRIFQHYQSGIFTGSCGTNLDHAVVAVGYGSENGVDYWIVRNSWGPRWGEEGY 336

Query: 307 IRMRRDVGG--AGLCGIARKASYPI 329
           IRM R++    +G CGIA +ASYP+
Sbjct: 337 IRMERNLAASKSGKCGIAVEASYPV 361


>gi|388517427|gb|AFK46775.1| unknown [Medicago truncatula]
          Length = 362

 Score =  275 bits (704), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 147/341 (43%), Positives = 210/341 (61%), Gaps = 15/341 (4%)

Query: 1   MLIIMVTWASLVMSRTL--HEDSISAKHELW-MAQSARTY----KNQAEKAMRFKIFKKN 53
           +LI++     LV+S +   H+  +S+   LW + +  R++    +N  EK  RF +FK N
Sbjct: 7   LLIVLSIALVLVVSESFDFHDKDVSSDESLWDLYERWRSHHTVSRNLNEKQKRFNVFKSN 66

Query: 54  FRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD 113
              +   N+  ++ YKL LN+FAD+T+ EF  ++ G K+    +   +   +   F Y +
Sbjct: 67  VMHVHNTNKM-DKPYKLKLNKFADMTNHEFKTTYAGTKVNHHRMFRGTPRVSGT-FMYEN 124

Query: 114 SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
             +  P S+DWR +GAVT VK+QG CG CW FS V AVEGI +I+T RL+ LSEQ+++DC
Sbjct: 125 FTKA-PASVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNRLVPLSEQELIDC 183

Query: 174 SG--SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP 231
               ++GC GG M+ AF YI +  G+T E  YPY   +G C+  +  +    I  ++ VP
Sbjct: 184 DNQENQGCNGGLMEYAFEYIKQKGGVTTESYYPYTANDGSCDATKENVPTVSIDGHETVP 243

Query: 232 TS-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP- 289
            + E AL  AV+ QPVSVAIDA    F++YS GVF G CG  LNH V IVGYG++ +G  
Sbjct: 244 ANDEDALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGDCGKELNHGVAIVGYGTTVDGTN 303

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
           YW+++NSWG  WGE G IRM+R+V    GLCGIA +ASYP+
Sbjct: 304 YWIVRNSWGAEWGEQGCIRMKRNVSNKEGLCGIAMEASYPV 344


>gi|242071345|ref|XP_002450949.1| hypothetical protein SORBIDRAFT_05g021550 [Sorghum bicolor]
 gi|241936792|gb|EES09937.1| hypothetical protein SORBIDRAFT_05g021550 [Sorghum bicolor]
          Length = 371

 Score =  275 bits (704), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 146/321 (45%), Positives = 209/321 (65%), Gaps = 13/321 (4%)

Query: 19  EDSISAKHELW----MAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNE 74
           E+S+ A +E W    M       + Q +KA  F +FK+N R+I + N++G ++++L+LN+
Sbjct: 35  EESLRALYEQWRSHYMVSRPAGLQEQDDKARWFNVFKENVRYIHEANKKG-RSFRLALNK 93

Query: 75  FADLTDEEFIASHTG--YKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTP 132
           FAD+T +EF  ++         R +S+  + + +  F Y  +   LP ++DWR RGAVT 
Sbjct: 94  FADMTTDEFRRAYAAGSRTRHHRALSSGIRRHGDGSFMYAQAGN-LPLAVDWRQRGAVTG 152

Query: 133 VKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSY 190
           +K+QG CG CW FS +AAVEGI KIRTG+L+SLSEQ+++DC    ++GC GG MD AF Y
Sbjct: 153 IKDQGQCGSCWAFSTIAAVEGINKIRTGKLVSLSEQELVDCDDVDNQGCNGGLMDYAFQY 212

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVA 249
           I R+ G+T E  YPY   +  CN  +       I  Y+DVP  +E AL+ AV+ QPVS+A
Sbjct: 213 IKRNGGITTESNYPYLAEQRSCNKAKERSHDVTIDGYEDVPANNEDALQKAVANQPVSIA 272

Query: 250 IDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIR 308
           I+AS   F++YS GVF G CG  L+H V  VGYG + +G  YW++KNSWG++WGE G+IR
Sbjct: 273 IEASGQDFQFYSEGVFTGSCGTELDHGVAAVGYGITRDGTKYWIVKNSWGEDWGERGYIR 332

Query: 309 MRRDVGGA-GLCGIARKASYP 328
           M+R +  + GLCGIA + SYP
Sbjct: 333 MQRGISDSQGLCGIAMEPSYP 353


>gi|125540888|gb|EAY87283.1| hypothetical protein OsI_08685 [Oryza sativa Indica Group]
          Length = 357

 Score =  275 bits (704), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 147/306 (48%), Positives = 197/306 (64%), Gaps = 12/306 (3%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           W  + ++ Y +  EK  R++IFK+N R I + NR  N +Y L LN FAD+  EEF AS+ 
Sbjct: 49  WSVKHSKIYASPKEKVKRYEIFKRNLRHIVETNRR-NGSYWLGLNHFADIAHEEFKASYL 107

Query: 89  GYK--MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFS 146
           G K  +  R+    +Q + +  F Y ++   LP ++DWR +GAVTPVKNQG CG CW FS
Sbjct: 108 GLKPGLARRD----AQPHGSTTFRYANAVN-LPWAVDWRKKGAVTPVKNQGECGSCWAFS 162

Query: 147 AVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERVYP 204
            VAAVEGI +I TG+L+SLSEQ+++DC  +   GC GG MD AF+YI+ +QG+  E  YP
Sbjct: 163 TVAAVEGINQIVTGKLVSLSEQELMDCDNTFNHGCRGGLMDFAFAYIMGNQGIYTEEDYP 222

Query: 205 YQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGG 263
           Y   EGYC  ++   K   I  Y+DVP  SE +L  A++ QPVSV I A S  F++Y GG
Sbjct: 223 YLMEEGYCREKQPHSKVITITGYEDVPENSETSLLKALAHQPVSVGIAAGSRDFQFYKGG 282

Query: 264 VFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIA 322
           +F G CG   +HA+T VGYGS     Y ++KNSWG+NWGE G+ R+RR  G   G+C I 
Sbjct: 283 IFDGECGIQPDHALTAVGYGSYYGQDYIIMKNSWGKNWGEQGYFRIRRGTGKPEGVCDIY 342

Query: 323 RKASYP 328
           + ASYP
Sbjct: 343 KIASYP 348


>gi|217073894|gb|ACJ85307.1| unknown [Medicago truncatula]
 gi|388507498|gb|AFK41815.1| unknown [Medicago truncatula]
          Length = 362

 Score =  275 bits (703), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 147/341 (43%), Positives = 210/341 (61%), Gaps = 15/341 (4%)

Query: 1   MLIIMVTWASLVMSRTL--HEDSISAKHELW-MAQSARTY----KNQAEKAMRFKIFKKN 53
           +LI++     LV+S +   H+  +S+   LW + +  R++    +N  EK  RF +FK N
Sbjct: 7   LLIVLSIALVLVVSESFDFHDKDVSSDESLWDLYERWRSHHTVSRNLNEKQKRFNVFKSN 66

Query: 54  FRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD 113
              +   N+  ++ YKL LN+FAD+T+ EF  ++ G K+    +   +   +   F Y +
Sbjct: 67  VMHVHNTNKM-DKPYKLKLNKFADMTNHEFKTTYAGSKVNHHRMFRGTPRVSGT-FMYEN 124

Query: 114 SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
             +  P S+DWR +GAVT VK+QG CG CW FS V AVEGI +I+T RL+ LSEQ+++DC
Sbjct: 125 FTKA-PASVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNRLVPLSEQELIDC 183

Query: 174 SG--SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP 231
               ++GC GG M+ AF YI +  G+T E  YPY   +G C+  +  +    I  ++ VP
Sbjct: 184 DNQENQGCNGGLMEYAFEYIKQKGGVTTESYYPYTANDGSCDATKENVPTVSIDGHETVP 243

Query: 232 TS-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP- 289
            + E AL  AV+ QPVSVAIDA    F++YS GVF G CG  LNH V IVGYG++ +G  
Sbjct: 244 ANDEDALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGDCGKELNHGVAIVGYGTTVDGTN 303

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
           YW+++NSWG  WGE G IRM+R+V    GLCGIA +ASYP+
Sbjct: 304 YWIVRNSWGAEWGEQGCIRMKRNVSNKEGLCGIAMEASYPV 344


>gi|326493368|dbj|BAJ85145.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 436

 Score =  275 bits (703), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 140/320 (43%), Positives = 197/320 (61%), Gaps = 19/320 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEF 75
           E+ +   +  WMA+   TY    E+  RF+ F+ N R+I++ N     G  +++L LN F
Sbjct: 36  EEEVRRMYAEWMAEHGSTYNAIGEEERRFEAFRDNLRYIDQHNAAADAGVHSFRLGLNRF 95

Query: 76  ADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTP 132
           ADLT+EE+ +++ G +      R +S + Q+  N+          LP S+DWR +GAV  
Sbjct: 96  ADLTNEEYRSTYLGARTKPDRERKLSARYQAADNDE---------LPESVDWRKKGAVGA 146

Query: 133 VKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSY 190
           VK+QG CG CW FSA+AAVEGI +I TG +I LSEQ+++DC  S  +GC GG MD AF +
Sbjct: 147 VKDQGGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQELVDCDTSYNQGCNGGLMDYAFEF 206

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVA 249
           II + G+  E  YPY+ R+  C+  +   K   I  Y+DVP  SE +L+ AV+ QP+SVA
Sbjct: 207 IINNGGIDSEEDYPYKERDNRCDANKKNAKVVTIDGYEDVPVNSEKSLQKAVANQPISVA 266

Query: 250 IDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRM 309
           I+A    F+ Y  G+F G CG  L+H V  VGYG+ N   YWL++NSWG  WGE G+IRM
Sbjct: 267 IEAGGRAFQLYKSGIFTGTCGTALDHGVAAVGYGTENGKDYWLVRNSWGSVWGEDGYIRM 326

Query: 310 RRDV-GGAGLCGIARKASYP 328
            R++   +G CGIA + SYP
Sbjct: 327 ERNIKASSGKCGIAVEPSYP 346


>gi|226533314|ref|NP_001150119.1| xylem cysteine proteinase 2 [Zea mays]
 gi|195636886|gb|ACG37911.1| xylem cysteine proteinase 2 precursor [Zea mays]
 gi|223946183|gb|ACN27175.1| unknown [Zea mays]
 gi|413951209|gb|AFW83858.1| Xylem cysteine proteinase 2 [Zea mays]
          Length = 385

 Score =  275 bits (703), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 151/332 (45%), Positives = 200/332 (60%), Gaps = 23/332 (6%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
            +S++   E W+++  R Y +  EK  RF++FK N   I++ NR+ + +Y L LNEFADL
Sbjct: 52  HESLAELFERWLSRHRRAYASLEEKLRRFQVFKDNLHHIDETNRKVS-SYWLGLNEFADL 110

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRR---GLPRSIDWRARGAVTPVKN 135
           T +EF A++ G +    +  +                     LP+S+DWR++GAVT VKN
Sbjct: 111 THDEFKATYLGLRSSVGDGGSGIDDDDEPEEEEGYEGVDGASLPKSVDWRSKGAVTGVKN 170

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIR 193
           QG CG CW FS VAAVEGI +I TG L +LSEQ+++DC   G+ GC GG MD AFSYI  
Sbjct: 171 QGQCGSCWAFSTVAAVEGINQIVTGNLTALSEQELIDCDTDGNNGCNGGLMDYAFSYIAH 230

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMK--------------AARIRSYQDVP-TSELALR 238
           + GL  E  YPY   EG C     + K                 I  Y+DVP  +E AL 
Sbjct: 231 NGGLHTEEAYPYLMEEGTCQRSSSSEKKWPGSSEDANDDAAVVTISGYEDVPRNNEQALL 290

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            A+++QPVSVAI+AS   F++YSGGVF GPCG  L+H V  VGYG++ +G  Y ++KNSW
Sbjct: 291 KALAQQPVSVAIEASGRNFQFYSGGVFDGPCGTQLDHGVAAVGYGTAAKGHDYIIVKNSW 350

Query: 298 GQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           G +WGE G+IRMRR  G   GLCGI + ASYP
Sbjct: 351 GPSWGEKGYIRMRRGTGKRQGLCGINKMASYP 382


>gi|359359066|gb|AEV40973.1| putative oryzain beta chain precursor [Oryza punctata]
          Length = 461

 Score =  275 bits (703), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 137/317 (43%), Positives = 200/317 (63%), Gaps = 14/317 (4%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQT--YKLSLNEFA 76
           E    A ++LW+A++ R+Y    E+  RF++F  N +F++  N   ++   ++L +N FA
Sbjct: 42  EAEARAAYDLWLAENGRSYNALGERERRFRVFWDNLKFVDAHNARADEHGGFRLGMNRFA 101

Query: 77  DLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQ 136
           DLT++EF ++  G K+  R+ +   + Y +      D    LP S+DWR +GAV PVKNQ
Sbjct: 102 DLTNDEFRSTFLGAKVVERSRA-AGERYRH------DGVEELPESVDWREKGAVAPVKNQ 154

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---RGCYGGWMDDAFSYIIR 193
           G CG CW FSAV+ VE I ++ TG +I+LSEQ++++CS +    GC GG MDDAF +II+
Sbjct: 155 GQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFIIK 214

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDA 252
           + G+  E  YPY+  +G C+  R   K   I  ++DVP   E +L+ AV+ QPVSVAI+A
Sbjct: 215 NGGIDTEDDYPYKAVDGKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEA 274

Query: 253 SSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRD 312
               F+ Y  GVF+G CG +L+H V  VGYG+ N   YW+++NSWG  WGE G++RM R+
Sbjct: 275 GGREFQLYHSGVFSGRCGTSLDHGVVAVGYGTDNGKDYWIVRNSWGPKWGESGYVRMERN 334

Query: 313 VGG-AGLCGIARKASYP 328
           +    G CGIA  ASYP
Sbjct: 335 INATTGKCGIAMMASYP 351


>gi|111073715|dbj|BAF02546.1| triticain alpha [Triticum aestivum]
 gi|388890585|gb|AFK80346.1| cysteine endopeptidase EP alpha [Secale cereale x Triticum durum]
          Length = 461

 Score =  275 bits (702), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 139/326 (42%), Positives = 196/326 (60%), Gaps = 13/326 (3%)

Query: 10  SLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQ 66
           S+V      E+ +   +  WM++  RTY    E+  RF++F+ N R+I++ N     G  
Sbjct: 25  SIVSYGERSEEEVRRMYAEWMSEHRRTYNAIGEEERRFEVFRDNLRYIDQHNAAADAGLH 84

Query: 67  TYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRA 126
           +++L LN FADLT+EE+ +++ G +         S  Y        D    LP ++DWR 
Sbjct: 85  SFRLGLNRFADLTNEEYRSTYLGARTKPDRERKLSARYQ------ADDNEELPETVDWRK 138

Query: 127 RGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWM 184
           +GAV  +K+QG CG CW FSA+AAVEGI +I TG +I LSEQ+++DC  S   GC GG M
Sbjct: 139 KGAVAAIKDQGGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQELVDCDTSYNEGCNGGLM 198

Query: 185 DDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR 243
           D AF +II + G+  E  YPY+ R+  C+  +   K   I  Y+DVP  SE +L+ AV+ 
Sbjct: 199 DYAFEFIINNGGIDSEEDYPYKERDNRCDANKKNAKVVTIDGYEDVPVNSEKSLQKAVAN 258

Query: 244 QPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGE 303
           QP+SVAI+A    F+ Y  G+F G CG  L+H V  VGYG+ N   YWL++NSWG  WGE
Sbjct: 259 QPISVAIEAGGRAFQLYKSGIFTGTCGTALDHGVAAVGYGTENGKDYWLVRNSWGTVWGE 318

Query: 304 GGFIRMRRDV-GGAGLCGIARKASYP 328
            G+IRM R++   +G CGIA + SYP
Sbjct: 319 DGYIRMERNIKASSGKCGIAVEPSYP 344


>gi|242074728|ref|XP_002447300.1| hypothetical protein SORBIDRAFT_06g032360 [Sorghum bicolor]
 gi|241938483|gb|EES11628.1| hypothetical protein SORBIDRAFT_06g032360 [Sorghum bicolor]
          Length = 471

 Score =  275 bits (702), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 147/326 (45%), Positives = 203/326 (62%), Gaps = 16/326 (4%)

Query: 13  MSRTLHEDSISAKHELWMAQSARTYKNQ-AEKAMRFKIFKKNFRFIEKFN-REGNQTYKL 70
           M+RT  E  + A +E WMA+  +   N   E   RF+ F  N RF++  N R G + Y+L
Sbjct: 41  MART--EAQVRAMYEQWMARHGKAASNALGEHDRRFRAFWDNLRFVDAHNARAGARGYRL 98

Query: 71  SLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAV 130
            +N FADLT+ EF A++      +    N + + A       D    LP  +DWR +GAV
Sbjct: 99  GINRFADLTNAEFRAAYL-----SAGARNGTATAATGERYRHDGVEALPEFVDWRQKGAV 153

Query: 131 TPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYGGWMDDA 187
            PVKNQG CG CW FSAV AVEGI +I TG L++LSEQ+++DCS    + GC GG MDDA
Sbjct: 154 APVKNQGQCGSCWAFSAVGAVEGINQIVTGELVTLSEQELVDCSKNGQNGGCDGGMMDDA 213

Query: 188 FSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPV 246
           F++I+ + G+  ++ YPY  R+G C+  + +     I  ++ VP   E +L+ AV+ QPV
Sbjct: 214 FAFIVGNGGIDTDKDYPYTARDGKCDVAKRSRHVVSIDGFEGVPRNDEKSLQKAVAHQPV 273

Query: 247 SVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG--PYWLIKNSWGQNWGEG 304
           +VAI+A    F+ Y  GVF G CG +L+H V  VGYG+  +G   YWL++NSWG +WGEG
Sbjct: 274 AVAIEAGGREFQLYQSGVFTGRCGTSLDHGVVAVGYGTEADGGRDYWLVRNSWGADWGEG 333

Query: 305 GFIRMRRDVGG-AGLCGIARKASYPI 329
           G+IRM R+VG  AG CGIA +ASYP+
Sbjct: 334 GYIRMERNVGARAGKCGIAMEASYPV 359


>gi|224133764|ref|XP_002321655.1| predicted protein [Populus trichocarpa]
 gi|222868651|gb|EEF05782.1| predicted protein [Populus trichocarpa]
          Length = 360

 Score =  275 bits (702), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 146/342 (42%), Positives = 213/342 (62%), Gaps = 17/342 (4%)

Query: 2   LIIMVTWASLVMSRT----LHEDSISAKHELW-MAQSARTYKNQA----EKAMRFKIFKK 52
           L+ +  + +LV+  T     HE  + ++  LW + +  R++   +    EK  RF +F+ 
Sbjct: 4   LLFVALYLALVLGFTESFDFHEKDLESEESLWDLYEKWRSHHTVSTSLDEKRKRFNVFRA 63

Query: 53  NFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYP 112
           N   +   N+  ++ YKL LN+FAD+T+ EF  ++   K+    +  +     N  F Y 
Sbjct: 64  NVLHVHNTNKM-DKPYKLKLNKFADMTNHEFRTAYASSKVKHHTMF-RGAPLGNGSFMYG 121

Query: 113 DSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLD 172
           +  + +P SIDWR +GAVTPVK+QG CG CW FS + AVEGI  I+T +LISLSEQ+++D
Sbjct: 122 NIDK-VPASIDWRKKGAVTPVKDQGKCGSCWAFSTIVAVEGINFIKTNKLISLSEQELVD 180

Query: 173 CSG--SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV 230
           C+   + GC GG MD AF +I + +G+T E  YPY+ ++G+C+  +    A  I  ++DV
Sbjct: 181 CNTGENHGCNGGLMDYAFEFITKQKGITTEANYPYRAQDGHCDANKANQPAVSIDGHEDV 240

Query: 231 -PTSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG- 288
              +E AL  AV+ QPVSVAIDA    F++YS GVF G CG  L+H V IVGYG++ +G 
Sbjct: 241 LHNNENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGECGKELDHGVAIVGYGTTVDGT 300

Query: 289 PYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
            YW+++NSWG  WGE G+IRM+R +    GLCGIA +ASYPI
Sbjct: 301 KYWIVRNSWGPEWGERGYIRMQRGISDRRGLCGIAMEASYPI 342


>gi|356543010|ref|XP_003539956.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
          Length = 306

 Score =  274 bits (701), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 143/315 (45%), Positives = 199/315 (63%), Gaps = 18/315 (5%)

Query: 22  ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDE 81
           +  + E W+ Q+ R YK++ E  +RF I++ N  +IE  N +   +Y L+ N+FADLT+E
Sbjct: 1   MRVRFERWLKQNDRXYKDKEEWEVRFGIYQANLEYIECKNSQ-EXSYNLTDNKFADLTNE 59

Query: 82  EFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGC 141
           EF++ + G+   TR + +    Y             LP S DWR  GAV+ +K+QG+CG 
Sbjct: 60  EFVSPYLGF--GTRFLPHTGFMYH--------EHEDLPESKDWRKEGAVSDIKDQGNCGS 109

Query: 142 CWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLT 198
           CW FSAVAAVEGI KI++G+L+SLSEQ+  DC    G++GC GG MD AF++I ++ GLT
Sbjct: 110 CWAFSAVAAVEGINKIKSGKLVSLSEQEFRDCDVEDGNQGCEGGLMDTAFAFIKKNGGLT 169

Query: 199 DERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELAL---RYAVSRQPVSVAIDASSP 255
             + YPY+  +G CN ++    AA I  +  VP ++ A+   + A + Q  SVAIDA   
Sbjct: 170 TSKDYPYEGVDGTCNKEKALHHAANISGHVKVPANDEAMLKAKAAAANQXESVAIDAGGH 229

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV-G 314
            F+ Y  GVF+G CG  LNH VTIVGYG      YW++KNSWG +WGE G+IRM+RD   
Sbjct: 230 AFQLYLKGVFSGICGKQLNHGVTIVGYGKGTSDKYWIVKNSWGADWGESGYIRMKRDAFD 289

Query: 315 GAGLCGIARKASYPI 329
            AG CGIA +ASYP+
Sbjct: 290 KAGTCGIAMQASYPL 304


>gi|115477767|ref|NP_001062479.1| Os08g0556900 [Oryza sativa Japonica Group]
 gi|42407937|dbj|BAD09076.1| putative cysteine proteinase [Oryza sativa Japonica Group]
 gi|113624448|dbj|BAF24393.1| Os08g0556900 [Oryza sativa Japonica Group]
 gi|125562525|gb|EAZ07973.1| hypothetical protein OsI_30231 [Oryza sativa Indica Group]
 gi|215701458|dbj|BAG92882.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 385

 Score =  274 bits (701), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 148/317 (46%), Positives = 202/317 (63%), Gaps = 10/317 (3%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           E+++   +E W  Q  R  ++  EKA RF +FK N R I +FNR  ++ YKL LN F D+
Sbjct: 41  EEALWELYERWRGQH-RVARDLGEKARRFNVFKDNVRLIHEFNRR-DEPYKLRLNRFGDM 98

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
           T +EF  ++   ++    +  + +    + F Y  +R  LP ++DWR +GAV  VK+QG 
Sbjct: 99  TADEFRRAYASSRVSHHRMF-RGRGERRSGFMYAGAR-DLPAAVDWREKGAVGAVKDQGQ 156

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSRGCYGGWMDDAFSYIIRSQ 195
           CG CW FS +AAVEGI  IRT  L +LSEQQ++DC   +G+ GC GG MD+AF YI +  
Sbjct: 157 CGSCWAFSTIAAVEGINAIRTSNLTALSEQQLVDCDTKTGNAGCDGGLMDNAFQYIAKHG 216

Query: 196 GLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASS 254
           G+     YPY+ R+  C     +  A  I  Y+DVP  SE AL+ AV+ QPVSVAI+A  
Sbjct: 217 GVAASSAYPYRARQSSCKSSAASSPAVTIDGYEDVPANSESALKKAVANQPVSVAIEAGG 276

Query: 255 PGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDV 313
             F++YS GVFAG CG  L+H V  VGYG++ +G  YW+++NSWG +WGE G+IRM+RDV
Sbjct: 277 SHFQFYSEGVFAGKCGTELDHGVAAVGYGTTVDGTKYWIVRNSWGADWGEKGYIRMKRDV 336

Query: 314 GGA-GLCGIARKASYPI 329
               GLCGIA +ASYPI
Sbjct: 337 SAKEGLCGIAMEASYPI 353


>gi|146216000|gb|ABQ10202.1| cysteine protease Cp4 [Actinidia deliciosa]
          Length = 463

 Score =  274 bits (700), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 144/311 (46%), Positives = 193/311 (62%), Gaps = 13/311 (4%)

Query: 24  AKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEF 83
           A +E W+    + Y    EK  RF+IFK N RF+++ N     +Y++ LN FADLT+EE+
Sbjct: 45  AIYEKWLTTHGKAYNAIGEKERRFEIFKDNLRFVDEHNAVAG-SYRVGLNRFADLTNEEY 103

Query: 84  IASHTG--YKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGC 141
            +   G   +M  R+ S +S  YA   F   D    LP S+DWR +GAV+PVK+QG CG 
Sbjct: 104 RSMFLGGNMEMKERSASTKSDRYA---FRAGDK---LPGSVDWREKGAVSPVKDQGQCGS 157

Query: 142 CWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTD 199
           CW FS ++AVEGI +I TG LISLSEQ+++DC  S   GC GG MD  F +II + G+  
Sbjct: 158 CWAFSTISAVEGINQIVTGELISLSEQELVDCDKSYNMGCNGGLMDYGFQFIINNGGIDT 217

Query: 200 ERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFR 258
           E  YPY+  +G C+  R   +   I  Y+DVP   E +L+ AV+ QPVSVAI+A    F+
Sbjct: 218 EEDYPYRAVDGTCDQFRKNARVVSINGYEDVPEDDENSLKKAVANQPVSVAIEAGGRAFQ 277

Query: 259 YYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AG 317
            Y  GVF G CG NL+H V  VGYG+ N   YW ++NSWG  WGE G+I++ R++   +G
Sbjct: 278 LYESGVFTGHCGTNLDHGVVAVGYGTENGVDYWTVRNSWGPKWGENGYIKLERNINATSG 337

Query: 318 LCGIARKASYP 328
            CGIA  ASYP
Sbjct: 338 KCGIASMASYP 348


>gi|297819566|ref|XP_002877666.1| hypothetical protein ARALYDRAFT_906213 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323504|gb|EFH53925.1| hypothetical protein ARALYDRAFT_906213 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 304

 Score =  274 bits (700), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 154/322 (47%), Positives = 199/322 (61%), Gaps = 34/322 (10%)

Query: 17  LHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFA 76
           L E S   KHE WM++  R Y + +EK  RF+IFKKN +F+E FN   N TYKL +N+F+
Sbjct: 9   LFEASAIEKHEQWMSRFNRVYSDDSEKTSRFEIFKKNLKFVESFNMNTNNTYKLDVNKFS 68

Query: 77  DLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRARGAVTPVKN 135
           DLTDEEF A + G  +    ++  SQ   +  F Y + S  G   S+DWR  GAVTPVK+
Sbjct: 69  DLTDEEFQARYMG--LVPEGMTGDSQKTVS--FRYENVSETG--ESMDWRLEGAVTPVKD 122

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR---GCYGGWMDDAFSYII 192
           QG CGCCW F+AVAAVEG+TKI  G L+SLSEQQ++DCS +    GC GG    A+ YI 
Sbjct: 123 QGQCGCCWAFAAVAAVEGVTKIANGELVSLSEQQLVDCSTANNNMGCDGGLALTAYDYIK 182

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAID 251
            +QG+T E  YPYQ  +  C     A  AA I  Y+ VP   E AL  AVS+        
Sbjct: 183 ENQGITSEENYPYQAVQQTCKSTDPA--AATISGYEAVPKDDEEALLKAVSQH------- 233

Query: 252 ASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRM 309
                      G+F    CG + +HAVTIVGYG+S EG  YWL+KNSWG++WGE G++R+
Sbjct: 234 -----------GIFEDEYCGTDSHHAVTIVGYGTSEEGIKYWLLKNSWGESWGENGYMRI 282

Query: 310 RRDVGGA-GLCGIARKASYPIA 330
           +RDV    G+CG+A +A YP+A
Sbjct: 283 KRDVDEPQGMCGLAHRAYYPVA 304


>gi|224133760|ref|XP_002321654.1| predicted protein [Populus trichocarpa]
 gi|222868650|gb|EEF05781.1| predicted protein [Populus trichocarpa]
          Length = 362

 Score =  273 bits (699), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 142/329 (43%), Positives = 204/329 (62%), Gaps = 13/329 (3%)

Query: 11  LVMSRTLHEDSISAKHELW-MAQSARTYKNQA----EKAMRFKIFKKNFRFIEKFNREGN 65
           +  S   HE  + ++  LW + +  R++   +    EK  RF +FK+N   + K N+ G 
Sbjct: 19  ITESLDFHEKDLESEESLWDLYERWRSHHTVSTSLDEKHKRFNVFKENVMHVHKTNKMG- 77

Query: 66  QTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWR 125
           + YKL LN+FAD+T+ EF + + G K+    +  +  +  N  F Y    + +P S+DWR
Sbjct: 78  KPYKLKLNKFADMTNHEFRSVYAGSKVKHHRMF-RGTTRGNGSFMYGKVEK-VPTSVDWR 135

Query: 126 ARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGW 183
            +GAVT VK+QG CG CW FS + AVEGI  I+T  L+SLSEQ+++DC  +  +GC GG 
Sbjct: 136 KKGAVTAVKDQGQCGSCWAFSTIVAVEGINYIKTNELVSLSEQELVDCDTTENQGCNGGL 195

Query: 184 MDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVS 242
           M+ AF +I + +G+T E  YPY+  +G+C+  +    A  I  Y+ VP   E AL  A +
Sbjct: 196 MEYAFEFIKKKRGITTESTYPYKAEDGHCDAAKENNPAVSIDGYEKVPENDEDALLKAAA 255

Query: 243 RQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNW 301
            QPVSVAIDA    F++YS GVF G CG  L+H V +VGYG++ +G  YW+++NSWG  W
Sbjct: 256 NQPVSVAIDAGGSDFQFYSEGVFIGECGTELDHGVAVVGYGTTLDGTKYWIVRNSWGPEW 315

Query: 302 GEGGFIRMRRDVGG-AGLCGIARKASYPI 329
           GE G+IRM+R +    GLCGIA +ASYPI
Sbjct: 316 GEKGYIRMQRGISDKEGLCGIAMEASYPI 344


>gi|110737959|dbj|BAF00916.1| cysteine proteinase [Arabidopsis thaliana]
          Length = 376

 Score =  273 bits (699), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 147/325 (45%), Positives = 202/325 (62%), Gaps = 19/325 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQA----EKAMRFKIFKKNFRFIEKFNREG-NQTYKLSLN 73
           ++ + + +  W A+  +T  N      ++  RF IFK N RFI+  N    N TYKL L 
Sbjct: 42  DEEVRSIYLQWSAEHGKTNNNNNGIINDQDKRFNIFKDNLRFIDLHNENNKNATYKLGLT 101

Query: 74  EFADLTDEEFIASHTGYKM-PTRNIS---NQSQSYANNWFGYPDSRRGLPRSIDWRARGA 129
           +F DLT++E+   + G +  P R I+   N +Q Y+    G     + +P ++DWR +GA
Sbjct: 102 KFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNG-----KEVPETVDWRQKGA 156

Query: 130 VTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDA 187
           V P+K+QG+CG CW FS  AAVEGI KI TG LISLSEQ+++DC  S  +GC GG MD A
Sbjct: 157 VNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDKSYNQGCNGGLMDYA 216

Query: 188 FSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPV 246
           F +I+++ GL  E+ YPY+   G CN      +   I  Y+DVPT  E AL+ A+S QPV
Sbjct: 217 FQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRVVSIDGYEDVPTKDETALKKAISYQPV 276

Query: 247 SVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGF 306
            VAI+A    F++Y  G+F G CG NL+HAV  VGYGS N   YW+++NSWG  WGE G+
Sbjct: 277 RVAIEAGGRIFQHYQSGIFTGSCGTNLDHAVVAVGYGSENGVDYWIVRNSWGPRWGEEGY 336

Query: 307 IRMRRDVGG--AGLCGIARKASYPI 329
           IRM R++    +G CGIA +ASYP+
Sbjct: 337 IRMERNLAASKSGKCGIAVEASYPV 361


>gi|1223922|gb|AAA92063.1| cysteinyl endopeptidase [Vigna radiata]
          Length = 362

 Score =  273 bits (698), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 143/326 (43%), Positives = 208/326 (63%), Gaps = 13/326 (3%)

Query: 14  SRTLHEDSISAKHELW-MAQSARTY----KNQAEKAMRFKIFKKNFRFIEKFNREGNQTY 68
           S   HE  ++++  LW + +  R++    ++  EK  RF +FK+N   +   N+  ++ Y
Sbjct: 22  SFDFHEKDLASEESLWDLYERWRSHHTVSRSLTEKHKRFNVFKENVMHVHNTNKM-DKPY 80

Query: 69  KLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARG 128
           KL LN+FAD+T+ EF +++ G K+    +   +Q + N  F Y +    +P S+DWR +G
Sbjct: 81  KLKLNKFADMTNHEFRSTYAGSKVNHHKMFRGTQ-HGNGTFMY-EKVGSVPASVDWRKKG 138

Query: 129 AVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDD 186
           AVT VK+QG CG CW FS V AVEGI +I+T +L+SLSEQ+++DC    ++GC GG M+ 
Sbjct: 139 AVTDVKDQGQCGSCWAFSTVVAVEGINQIKTDKLVSLSEQELVDCDKEENQGCNGGLMES 198

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQP 245
           AF +I +  G+T E  YPY  +EG C+  +    A  I  +++VP + E AL  AV+ QP
Sbjct: 199 AFEFIKQKGGITTESNYPYTAQEGTCDASKVNDLAVSIDGHENVPVNDENALLKAVANQP 258

Query: 246 VSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEG 304
           VSVAIDA    F++YS GV  G C  +LNH V IVGYG++ +G  YW+++NSWG  WGE 
Sbjct: 259 VSVAIDAGGSDFQFYSEGVLTGDCNTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEQ 318

Query: 305 GFIRMRRDVG-GAGLCGIARKASYPI 329
           G+IRM+R++    GLCGIA  ASYPI
Sbjct: 319 GYIRMQRNISKKEGLCGIAMMASYPI 344


>gi|22759715|dbj|BAC10906.1| cysteine proteinase [Zinnia elegans]
          Length = 352

 Score =  273 bits (698), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 143/306 (46%), Positives = 192/306 (62%), Gaps = 11/306 (3%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           E W+ + ++ Y++  EK  RF+IF  N + I++ N++ +  Y L LNEFADLT EEF   
Sbjct: 50  ESWLVKHSKFYESLDEKLHRFEIFMDNLKHIDETNKKVSN-YWLGLNEFADLTHEEFKHK 108

Query: 87  HTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFS 146
             G+K       ++S    +  FGY D    LP+S+DWR +GAV PVKNQG CG CW FS
Sbjct: 109 FLGFKGELAERKDES----SKEFGYRDFVD-LPKSVDWRKKGAVAPVKNQGQCGSCWAFS 163

Query: 147 AVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERVYP 204
            VAAVEGI +I TG L  LSEQ+++DC  +   GC GG MD AF+Y++RS GL  E  YP
Sbjct: 164 TVAAVEGINQIVTGNLTMLSEQELIDCDTTFNNGCNGGLMDYAFAYVMRS-GLHKEEEYP 222

Query: 205 YQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGG 263
           Y   EG C+ ++   +   I  Y DVP   E +   A++ QP+SVAI+AS   F++YSGG
Sbjct: 223 YIMSEGTCDEKKDVSEKVTISGYHDVPRNDEASFLKALANQPISVAIEASGRDFQFYSGG 282

Query: 264 VFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIA 322
           VF G CG  L+H V  VGYG++    Y +++NSWG  WGE G+IRM+R  G   G+CG+ 
Sbjct: 283 VFDGHCGTELDHGVAAVGYGTTKGLDYVIVRNSWGPKWGEKGYIRMKRGSGKPHGMCGLY 342

Query: 323 RKASYP 328
             ASYP
Sbjct: 343 MMASYP 348


>gi|449525012|ref|XP_004169515.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus]
          Length = 459

 Score =  273 bits (698), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 148/325 (45%), Positives = 206/325 (63%), Gaps = 13/325 (4%)

Query: 9   ASLVMSRTLHEDSISAKHELWMAQSARTYKNQ-AEKAMRFKIFKKNFRFIEKFNREGNQT 67
           +S++  RT  +D + A ++ W A+  + + N  AE   RF IFK N +FI++ N + N  
Sbjct: 26  SSIIPQRT--DDEVMALYDQWRAKHGKLHNNLGAEPENRFHIFKDNLKFIDEINAQ-NLP 82

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           Y+L LN FADLT+EE+ + + G K  + +  N++   +N +   P     LP SIDWRA+
Sbjct: 83  YRLGLNVFADLTNEEYRSRYLGGKFASGSRRNRT---SNRYL--PRLGDDLPDSIDWRAK 137

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMD 185
           GAV PVK+QGSCG CW FS VA+VE I +I TG LI+LSEQ+++DC  S   GC GG MD
Sbjct: 138 GAVAPVKDQGSCGSCWAFSTVASVEAINQIVTGDLIALSEQELVDCDRSYNEGCNGGLMD 197

Query: 186 DAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQ 244
            AF +II + GL  E  YPY   +  C   +   K   I SY+DVP + E AL+ AVS+Q
Sbjct: 198 YAFEFIIENGGLDTEEDYPYYGFDSSCIQYKKNAKVVAIDSYEDVPVNNEKALQKAVSKQ 257

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEG 304
            VSVAI+     F+ Y  G+F G CG +L+H V +VGYGS     YW+++NSWG +WGE 
Sbjct: 258 VVSVAIEGGGRSFQLYQSGIFTGRCGTDLDHGVNVVGYGSEGGVDYWIVRNSWGGSWGES 317

Query: 305 GFIRMRRDVGG-AGLCGIARKASYP 328
           G+++M+R++    GLCGIA + SYP
Sbjct: 318 GYVKMQRNIASPTGLCGIAMEPSYP 342


>gi|109939734|sp|P25776.2|ORYA_ORYSJ RecName: Full=Oryzain alpha chain; Flags: Precursor
 gi|78192122|gb|ABB30151.1| oryzain alpha [Oryza sativa Japonica Group]
          Length = 458

 Score =  273 bits (698), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 139/310 (44%), Positives = 194/310 (62%), Gaps = 17/310 (5%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEFADLTDEEFIA 85
           W A+  ++Y    E+  R+  F+ N R+I++ N     G  +++L LN FADLT+EE+  
Sbjct: 43  WKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRD 102

Query: 86  SHTGYKMPTRNISNQSQSY--ANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCW 143
           ++ G +   R     S  Y  A+N          LP S+DWR +GAV  +K+QG CG CW
Sbjct: 103 TYLGLRNKPRRERKVSDRYLAADN--------EALPESVDWRTKGAVAEIKDQGGCGSCW 154

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDER 201
            FSA+AAVEGI +I TG LISLSEQ+++DC  S   GC GG MD AF +II + G+  E 
Sbjct: 155 AFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGGIDTED 214

Query: 202 VYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGFRYY 260
            YPY+ ++  C+  R   K   I SY+DV P SE +L+ AV+ QPVSVAI+A    F+ Y
Sbjct: 215 DYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQPVSVAIEAGGRAFQLY 274

Query: 261 SGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV-GGAGLC 319
           S G+F G CG  L+H V  VGYG+ N   YW+++NSWG++WGE G++RM R++   +G C
Sbjct: 275 SSGIFTGKCGTALDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMERNIKASSGKC 334

Query: 320 GIARKASYPI 329
           GIA + SYP+
Sbjct: 335 GIAVEPSYPL 344


>gi|194352754|emb|CAQ00105.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
 gi|326513690|dbj|BAJ87864.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326514532|dbj|BAJ96253.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 463

 Score =  273 bits (698), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 142/329 (43%), Positives = 200/329 (60%), Gaps = 19/329 (5%)

Query: 10  SLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQ 66
           S+V      E+ +   +  WMA+   TY    E+  RF+ F+ N R+I++ N     G  
Sbjct: 27  SIVSYGERSEEEVRRMYAEWMAEHGSTYNAIGEEERRFEAFRDNLRYIDQHNAAADAGVH 86

Query: 67  TYKLSLNEFADLTDEEFIASHTGYKMP---TRNISNQSQSYANNWFGYPDSRRGLPRSID 123
           +++L LN FADLT+EE+ +++ G +      R +S + Q+  N+          LP S+D
Sbjct: 87  SFRLGLNRFADLTNEEYRSTYLGARTKPDRERKLSARYQAADNDE---------LPESVD 137

Query: 124 WRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYG 181
           WR +GAV  VK+QG CG CW FSA+AAVEGI +I TG +I LSEQ+++DC  S  +GC G
Sbjct: 138 WRKKGAVGAVKDQGGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQELVDCDTSYNQGCNG 197

Query: 182 GWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYA 240
           G MD AF +II + G+  E  YPY+ R+  C+  +   K   I  Y+DVP  SE +L+ A
Sbjct: 198 GLMDYAFEFIINNGGIDSEEDYPYKERDNRCDANKKNAKVVTIDGYEDVPVNSEKSLQKA 257

Query: 241 VSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQN 300
           V+ QP+SVAI+A    F+ Y  G+F G CG  L+H V  VGYG+ N   YWL++NSWG  
Sbjct: 258 VANQPISVAIEAGGRAFQLYKSGIFTGTCGTALDHGVAAVGYGTENGKDYWLVRNSWGSV 317

Query: 301 WGEGGFIRMRRDV-GGAGLCGIARKASYP 328
           WGE G+IRM R++   +G CGIA + SYP
Sbjct: 318 WGEDGYIRMERNIKASSGKCGIAVEPSYP 346


>gi|226507844|ref|NP_001148894.1| LOC100282514 precursor [Zea mays]
 gi|194703250|gb|ACF85709.1| unknown [Zea mays]
 gi|195622994|gb|ACG33327.1| vignain precursor [Zea mays]
          Length = 356

 Score =  273 bits (698), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 148/335 (44%), Positives = 204/335 (60%), Gaps = 31/335 (9%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +  + E WM +  R Y +  EK  R +++++N   +E FN  GN  Y+L+ N+FADLT
Sbjct: 27  DPMLERFEQWMGRHGRLYADAGEKQRRLEVYRRNVELVETFNSMGN-GYRLADNKFADLT 85

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWF-----------GYPDSRRGLPRSIDWRARG 128
           +EEF A   G+  P R+      S A +             GY D    LP+S+DWR +G
Sbjct: 86  NEEFRAKMLGFGRP-RSGGGAGHSTAPSTVACIGSGLMGRQGYSD----LPKSVDWREKG 140

Query: 129 AVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDA 187
           AV PVK+QG CG CW FSAVAA+EGI +I+ G+L+SLSEQ+++DC + + GC GG+M  A
Sbjct: 141 AVAPVKSQGDCGSCWAFSAVAAIEGINQIKNGKLVSLSEQELVDCDTKAIGCAGGYMSWA 200

Query: 188 FSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPV 246
           F ++++++GLT ER YPYQ   G C   +    A  I  Y +V P+SE  L  A + QPV
Sbjct: 201 FEFVMKNRGLTTERNYPYQGLNGACQTPKLKESAVSISGYMNVTPSSEPDLLRAAAAQPV 260

Query: 247 SVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSS---NEG--------PYWLIKN 295
           SVA+DA S  ++ Y GGVF GPC   LNH VT+VGYG +    +G         YW++KN
Sbjct: 261 SVAVDAGSFVWQLYGGGVFTGPCTAELNHGVTVVGYGETQGDTDGDGSGVPGKKYWIVKN 320

Query: 296 SWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPI 329
           SWG  WG+ G+I M+R+    +GLCGIA   SYP+
Sbjct: 321 SWGPEWGDAGYILMQREASVASGLCGIAMLPSYPV 355


>gi|218202077|gb|EEC84504.1| hypothetical protein OsI_31195 [Oryza sativa Indica Group]
          Length = 362

 Score =  273 bits (698), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 143/309 (46%), Positives = 195/309 (63%), Gaps = 13/309 (4%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           W     R+Y +  E   RF ++++N  FI+  N  G+ TY+L+ NEFADLT+EEF+A++T
Sbjct: 54  WQGAHNRSYPSAEEALQRFDVYRRNAEFIDAVNLRGDLTYRLAENEFADLTEEEFLATYT 113

Query: 89  GYKM---PTRN-ISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS-CGCCW 143
           GY     P  + +        +  F Y   R  +P S+DWRA+GAV P K+Q S C  CW
Sbjct: 114 GYYAGDGPVDDSVITTGAGDVDASFSY---RVDVPASVDWRAQGAVVPPKSQTSTCSSCW 170

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYIIRSQGLTDERV 202
            F   A +E +  I+TG+L+SLSEQQ++DC S   GC  G    A+ +++ + GLT E  
Sbjct: 171 AFVTAATIESLNMIKTGKLVSLSEQQLVDCDSYDGGCNLGSYGRAYKWVVENGGLTTEAD 230

Query: 203 YPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYS 261
           YPY  R G CN  + A  AA+I  +  VP  +E AL+ AV+RQPV+VAI+  S G ++Y 
Sbjct: 231 YPYTARRGPCNRAKSAHHAAKITGFGKVPPRNEAALQAAVARQPVAVAIEVGS-GMQFYK 289

Query: 262 GGVFAGPCGNNLNHAVTIVGYGS--SNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLC 319
           GGV+ GPCG  L HAVT+VGYG+  S+   YW IKNSWGQ+WGE G+IR+ RDVGG GLC
Sbjct: 290 GGVYTGPCGTRLAHAVTVVGYGTDASSGAKYWTIKNSWGQSWGERGYIRILRDVGGPGLC 349

Query: 320 GIARKASYP 328
           G+    +YP
Sbjct: 350 GVTLDIAYP 358


>gi|115478933|ref|NP_001063060.1| Os09g0381400 [Oryza sativa Japonica Group]
 gi|113631293|dbj|BAF24974.1| Os09g0381400 [Oryza sativa Japonica Group]
 gi|215678649|dbj|BAG92304.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218202075|gb|EEC84502.1| hypothetical protein OsI_31193 [Oryza sativa Indica Group]
          Length = 362

 Score =  273 bits (698), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 143/309 (46%), Positives = 195/309 (63%), Gaps = 13/309 (4%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           W     R+Y +  E   RF ++++N  FI+  N  G+ TY+L+ NEFADLT+EEF+A++T
Sbjct: 54  WQGAHNRSYPSAEEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEEEFLATYT 113

Query: 89  GYKM---PTRN-ISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS-CGCCW 143
           GY     P  + +        +  F Y   R  +P S+DWRA+GAV P K+Q S C  CW
Sbjct: 114 GYYAGDGPVDDSVITTGAGDVDASFSY---RVDVPASVDWRAQGAVVPPKSQTSTCSSCW 170

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYIIRSQGLTDERV 202
            F   A +E +  I+TG+L+SLSEQQ++DC S   GC  G    A+ +++ + GLT E  
Sbjct: 171 AFVTAATIESLNMIKTGKLVSLSEQQLVDCDSYDGGCNLGSYGRAYKWVVENGGLTTEAD 230

Query: 203 YPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYS 261
           YPY  R G CN  + A  AA+I  +  VP  +E AL+ AV+RQPV+VAI+  S G ++Y 
Sbjct: 231 YPYTARRGPCNRAKSAHHAAKITGFGKVPPRNEAALQAAVARQPVAVAIEVGS-GMQFYK 289

Query: 262 GGVFAGPCGNNLNHAVTIVGYGS--SNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLC 319
           GGV+ GPCG  L HAVT+VGYG+  S+   YW IKNSWGQ+WGE G+IR+ RDVGG GLC
Sbjct: 290 GGVYTGPCGTRLAHAVTVVGYGTDASSGAKYWTIKNSWGQSWGERGYIRILRDVGGPGLC 349

Query: 320 GIARKASYP 328
           G+    +YP
Sbjct: 350 GVTLDIAYP 358


>gi|2224808|emb|CAB09697.1| cysteine endopeptidase EP-A [Hordeum vulgare subsp. vulgare]
 gi|326502180|dbj|BAK06781.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 365

 Score =  273 bits (698), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 146/318 (45%), Positives = 212/318 (66%), Gaps = 13/318 (4%)

Query: 19  EDSISAKHELWMAQ---SARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEF 75
           E+S+   +E W +    S R     AE+  RF +FK+N R++ + N+  ++ ++L+LN+F
Sbjct: 34  EESLRGLYERWRSHYTVSRRGLGADAEE-RRFNVFKENARYVHEGNKR-DRPFRLALNKF 91

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
           AD+T +EF  ++ G ++   ++S       +  F Y D+   LP ++DWR +GAVT +K+
Sbjct: 92  ADMTTDEFRRTYAGSRV-RHHLSLSGGRRGDGGFRYADADN-LPPAVDWRQKGAVTAIKD 149

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYIIR 193
           QG CG CW FS + AVEGI KIRTG+L+SLSEQ+++DC    ++GC GG MD AF +I +
Sbjct: 150 QGQCGSCWAFSTIVAVEGINKIRTGKLVSLSEQELMDCDNVNNQGCEGGLMDYAFQFIQK 209

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDA 252
           + G+T E  YPYQ  +G C+  +   +A  I  Y+DVP + E AL+ AV+ QPVSVAIDA
Sbjct: 210 N-GITTESNYPYQGEQGSCDQAKENAQAVTIDGYEDVPANDESALQKAVAGQPVSVAIDA 268

Query: 253 SSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRR 311
           S   F++YS GVF G C  +L+H V  VGYG++ +G  YW++KNSWG++WGE G+IRM+R
Sbjct: 269 SGQDFQFYSEGVFTGECSTDLDHGVAAVGYGATRDGTKYWIVKNSWGEDWGEKGYIRMQR 328

Query: 312 DVGGA-GLCGIARKASYP 328
            V    GLCGIA +ASYP
Sbjct: 329 GVSQTEGLCGIAMQASYP 346


>gi|445927|prf||1910332A Cys endopeptidase
          Length = 362

 Score =  273 bits (698), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 143/326 (43%), Positives = 208/326 (63%), Gaps = 13/326 (3%)

Query: 14  SRTLHEDSISAKHELW-MAQSARTY----KNQAEKAMRFKIFKKNFRFIEKFNREGNQTY 68
           S   HE  + ++  LW + +  R++    ++  EK  RF +FK N   +   N+  ++ Y
Sbjct: 22  SFDFHEKDLESEESLWDLYERWRSHHTVSRSLGEKHKRFNVFKANVMHVHNTNKM-DKPY 80

Query: 69  KLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARG 128
           KL LN+FAD+T+ EF +++ G K+    +   SQ + +  F Y +    +P S+DWR +G
Sbjct: 81  KLKLNKFADMTNHEFRSTYAGSKVNHHKMFRGSQ-HGSGTFMY-EKVGSVPASVDWRKKG 138

Query: 129 AVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDD 186
           AVT VK+QG CG CW FS + AVEGI +I+T +L+SLSEQ+++DC    ++GC GG M+ 
Sbjct: 139 AVTDVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDKEENQGCNGGLMES 198

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQP 245
           AF +I +  G+T E  YPY+ +EG C+  +    A  I  +++VP + E AL  AV+ QP
Sbjct: 199 AFEFIKQKGGITTESNYPYKAQEGTCDESKVNDLAVSIDGHENVPVNDENALLKAVANQP 258

Query: 246 VSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEG 304
           VSVAIDA    F++YS GVF G C  +LNH V IVGYG++ +G  YW+++NSWG  WGE 
Sbjct: 259 VSVAIDAGGSDFQFYSEGVFTGDCNTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEQ 318

Query: 305 GFIRMRRDVG-GAGLCGIARKASYPI 329
           G+IRM+R++    GLCGIA  ASYPI
Sbjct: 319 GYIRMQRNISKKEGLCGIAMMASYPI 344


>gi|255032|gb|AAB23155.1| COT44=cysteine proteinase homolog [Brassica napus, seedling, rapid
           cycling base population CrGC5, Peptide, 328 aa]
          Length = 328

 Score =  273 bits (698), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 140/290 (48%), Positives = 185/290 (63%), Gaps = 8/290 (2%)

Query: 46  RFKIFKKNFRFIEKFNREG-NQTYKLSLNEFADLTDEEFIASHTGYKM-PTRNISNQSQS 103
           RF IFK N RFI+  N    N TYKL L  FA+LT++E+ + + G +  P R I+     
Sbjct: 28  RFNIFKDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLGARTEPVRRITKAKN- 86

Query: 104 YANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLI 163
             N  +    +   +P ++DWR +GAV  +K+QG+CG CW FS  AAVEGI KI TG L+
Sbjct: 87  -VNMKYSAAVNDVEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELV 145

Query: 164 SLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKA 221
           SLSEQ+++DC  S  +GC GG MD AF +I+++ GL  E+ YPY    G CN      + 
Sbjct: 146 SLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGKCNSLLKNSRV 205

Query: 222 ARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIV 280
             I  Y+DVP+  E AL+ AVS QPVSVAIDA    F++Y  G+F G CG N++HAV  V
Sbjct: 206 VTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFTGKCGTNMDHAVVAV 265

Query: 281 GYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
           GYGS N   YW+++NSWG  WGE G+IRM R+V   +G CGIA +ASYP+
Sbjct: 266 GYGSENGVDYWIVRNSWGTRWGEDGYIRMERNVASKSGKCGIAIEASYPV 315


>gi|118127|sp|P25251.1|CYSP4_BRANA RecName: Full=Cysteine proteinase COT44; Flags: Precursor
          Length = 328

 Score =  273 bits (698), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 140/290 (48%), Positives = 185/290 (63%), Gaps = 8/290 (2%)

Query: 46  RFKIFKKNFRFIEKFNREG-NQTYKLSLNEFADLTDEEFIASHTGYKM-PTRNISNQSQS 103
           RF IFK N RFI+  N    N TYKL L  FA+LT++E+ + + G +  P R I+     
Sbjct: 28  RFNIFKDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLGARTEPVRRITKAKN- 86

Query: 104 YANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLI 163
             N  +    +   +P ++DWR +GAV  +K+QG+CG CW FS  AAVEGI KI TG L+
Sbjct: 87  -VNMKYSAAVNVDEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELV 145

Query: 164 SLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKA 221
           SLSEQ+++DC  S  +GC GG MD AF +I+++ GL  E+ YPY    G CN      + 
Sbjct: 146 SLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGKCNSLLKNSRV 205

Query: 222 ARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIV 280
             I  Y+DVP+  E AL+ AVS QPVSVAIDA    F++Y  G+F G CG N++HAV  V
Sbjct: 206 VTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFTGKCGTNMDHAVVAV 265

Query: 281 GYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
           GYGS N   YW+++NSWG  WGE G+IRM R+V   +G CGIA +ASYP+
Sbjct: 266 GYGSENGVDYWIVRNSWGTRWGEDGYIRMERNVASKSGKCGIAIEASYPV 315


>gi|32396020|gb|AAP41847.1| senescence-associated cysteine protease [Anthurium andraeanum]
          Length = 460

 Score =  273 bits (698), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 146/329 (44%), Positives = 202/329 (61%), Gaps = 17/329 (5%)

Query: 11  LVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNR-EGNQTYK 69
           +V  RT  E+ +   +E W+  + + Y    EK  RF+IF  N R+I+  NR E N +Y 
Sbjct: 25  IVAERT--EEEVRLLYEGWLVGNGKAYNLLGEKERRFEIFWDNLRYIDDHNRAENNHSYT 82

Query: 70  LSLNEFADLTDEEFIASHTGYK----MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWR 125
           L L  FADLT+EE+ +++ G K     P R  +N++     +     D    LP+ +DWR
Sbjct: 83  LGLTRFADLTNEEYRSTYLGVKPGQVRPRR--ANRAPGRGRDLSANGDD---LPQKVDWR 137

Query: 126 ARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGW 183
            +GAV P+K+QG CG CW FS VAAVEGI +I TG LI LSEQ+++DC  +   GC GG 
Sbjct: 138 EKGAVAPIKDQGGCGSCWAFSTVAAVEGINQIVTGDLIVLSEQELVDCDTAYNEGCNGGL 197

Query: 184 MDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVS 242
           MD AF +II + G+  E  YPY+ R+G C+  R   K   I SY+DV    E AL+ AV+
Sbjct: 198 MDYAFQFIISNGGIDTEEDYPYKERDGLCDPNRKNAKVVSIDSYEDVLENDEHALKTAVA 257

Query: 243 RQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
            QPVSVAI+     F+ Y  G+F G CG +L+H V  VGYG+ +   YW+++NSWG++WG
Sbjct: 258 HQPVSVAIEGGGRSFQLYKSGIFDGRCGIDLDHGVVAVGYGTESGKDYWIVRNSWGKSWG 317

Query: 303 EGGFIRMRRDV--GGAGLCGIARKASYPI 329
           E G+IRM R++    +G CGIA + SYPI
Sbjct: 318 EAGYIRMERNLPSSSSGKCGIAIEPSYPI 346


>gi|222629675|gb|EEE61807.1| hypothetical protein OsJ_16426 [Oryza sativa Japonica Group]
          Length = 459

 Score =  273 bits (698), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 139/310 (44%), Positives = 194/310 (62%), Gaps = 17/310 (5%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEFADLTDEEFIA 85
           W A+  ++Y    E+  R+  F+ N R+I++ N     G  +++L LN FADLT+EE+  
Sbjct: 44  WKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRD 103

Query: 86  SHTGYKMPTRNISNQSQSY--ANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCW 143
           ++ G +   R     S  Y  A+N          LP S+DWR +GAV  +K+QG CG CW
Sbjct: 104 TYLGLRNKPRRERKVSDRYLAADN--------EALPESVDWRTKGAVAEIKDQGGCGSCW 155

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDER 201
            FSA+AAVEGI +I TG LISLSEQ+++DC  S   GC GG MD AF +II + G+  E 
Sbjct: 156 AFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGGIDTED 215

Query: 202 VYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGFRYY 260
            YPY+ ++  C+  R   K   I SY+DV P SE +L+ AV+ QPVSVAI+A    F+ Y
Sbjct: 216 DYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQPVSVAIEAGGRAFQLY 275

Query: 261 SGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV-GGAGLC 319
           S G+F G CG  L+H V  VGYG+ N   YW+++NSWG++WGE G++RM R++   +G C
Sbjct: 276 SSGIFTGKCGTALDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMERNIKASSGKC 335

Query: 320 GIARKASYPI 329
           GIA + SYP+
Sbjct: 336 GIAVEPSYPL 345


>gi|414589857|tpg|DAA40428.1| TPA: Vignain [Zea mays]
          Length = 377

 Score =  273 bits (697), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 148/335 (44%), Positives = 204/335 (60%), Gaps = 31/335 (9%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +  + E WM +  R Y +  EK  R +++++N   +E FN  GN  Y+L+ N+FADLT
Sbjct: 48  DPMLERFEQWMGRHGRLYADAGEKQRRLEVYRRNVELVETFNSMGN-GYRLADNKFADLT 106

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWF-----------GYPDSRRGLPRSIDWRARG 128
           +EEF A   G+  P R+      S A +             GY D    LP+S+DWR +G
Sbjct: 107 NEEFRAKMLGFGRP-RSGGGAGHSTAPSTVACIGSGLMGRQGYSD----LPKSVDWREKG 161

Query: 129 AVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDA 187
           AV PVK+QG CG CW FSAVAA+EGI +I+ G+L+SLSEQ+++DC + + GC GG+M  A
Sbjct: 162 AVAPVKSQGDCGSCWAFSAVAAIEGINQIKNGKLVSLSEQELVDCDTKAIGCAGGYMSWA 221

Query: 188 FSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPV 246
           F ++++++GLT ER YPYQ   G C   +    A  I  Y +V P+SE  L  A + QPV
Sbjct: 222 FEFVMKNRGLTTERNYPYQGLNGACQTPKLKESAVSISGYMNVTPSSEPDLLRAAAAQPV 281

Query: 247 SVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSS---NEG--------PYWLIKN 295
           SVA+DA S  ++ Y GGVF GPC   LNH VT+VGYG +    +G         YW++KN
Sbjct: 282 SVAVDAGSFVWQLYGGGVFTGPCTAELNHGVTVVGYGETQGDTDGDGSGVPGKKYWIVKN 341

Query: 296 SWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPI 329
           SWG  WG+ G+I M+R+    +GLCGIA   SYP+
Sbjct: 342 SWGPEWGDAGYILMQREASVASGLCGIAMLPSYPV 376


>gi|218202389|gb|EEC84816.1| hypothetical protein OsI_31898 [Oryza sativa Indica Group]
          Length = 350

 Score =  273 bits (697), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 145/327 (44%), Positives = 197/327 (60%), Gaps = 20/327 (6%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +  + E WM +  R Y +  EK  RF+++++N   +E FN   N  YKL+ N+FADLT
Sbjct: 26  DLMLDRFEQWMIRHGRAYTDSGEKQRRFEVYRRNVELVETFNSMSN-GYKLADNKFADLT 84

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYP--DSRRGLPRSIDWRARGAVTPVKNQG 137
           +EEF A   G++ P   I   S + + +    P   S   LP+S+DWR +GAV  VKNQG
Sbjct: 85  NEEFRAKMLGFR-PHVTIPQISNTCSAD-IAMPGESSDDILPKSVDWRKKGAVVEVKNQG 142

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQG 196
            CG CW FSAVAA+EGI +I+ G L+SLSEQ+++DC   + GC GG+M  AF +++ + G
Sbjct: 143 DCGSCWAFSAVAAIEGINQIKNGELVSLSEQELVDCDDEAVGCGGGYMSWAFEFVVGNHG 202

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSP 255
           LT E  YPY    G C   +    A  I  Y++V P+SE  L  A + QPVSVA+D  S 
Sbjct: 203 LTTEASYPYHAANGACQAAKLNQSAVAIAGYRNVTPSSEPDLARAAAAQPVSVAVDGGSF 262

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-----------YWLIKNSWGQNWGEG 304
            F+ Y  GV+ GPC  ++NH VT+VGYG S               YW++KNSWG  WG+ 
Sbjct: 263 MFQLYGSGVYTGPCTADVNHGVTVVGYGESEPKTDGGGAAKGGEKYWIVKNSWGAEWGDA 322

Query: 305 GFIRMRRDVGG--AGLCGIARKASYPI 329
           G+I M+RDV G  +GLCGIA   SYP+
Sbjct: 323 GYILMQRDVAGLASGLCGIALLPSYPV 349


>gi|357156854|ref|XP_003577598.1| PREDICTED: thiol protease SEN102-like [Brachypodium distachyon]
          Length = 368

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 140/294 (47%), Positives = 201/294 (68%), Gaps = 10/294 (3%)

Query: 42  EKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKM-PTRNISNQ 100
           + A RF +FK+N ++I + N++ ++ ++L+LN+FAD+T +E   S+ G ++   R +S  
Sbjct: 64  DPARRFNVFKENVKYIHEANKK-DRPFRLALNKFADMTTDELRHSYAGSRVRHHRALSGG 122

Query: 101 SQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTG 160
            ++  N  F Y D+   LP ++DWR +GAVT +K+QG CG CW FS +AAVE I KIRTG
Sbjct: 123 RRAQGN--FTYSDAEN-LPPAVDWREKGAVTGIKDQGQCGSCWAFSTIAAVESINKIRTG 179

Query: 161 RLISLSEQQVLDCS--GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGA 218
           +L+SLSEQ+++DC     +GC GG MD AF +I ++ G+T E  YPYQ ++  C+  +  
Sbjct: 180 KLVSLSEQELMDCDNVNDQGCDGGLMDYAFQFIQKNGGVTSEANYPYQGQQNTCDQAKEN 239

Query: 219 MKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAV 277
                I  Y+DVP + E AL+ AV+ QPVSVAI+AS   F++YS GVF G C  +L+H V
Sbjct: 240 THDVAIDGYEDVPANDESALQKAVAYQPVSVAIEASGQDFQFYSEGVFTGQCTTDLDHGV 299

Query: 278 TIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPI 329
             VGYG++ +G  YW++KNSWG +WGE G+IRM+R V  A GLCGIA +ASYPI
Sbjct: 300 AAVGYGTARDGTKYWIVKNSWGLDWGEKGYIRMQRGVSQAEGLCGIAMQASYPI 353


>gi|374530932|gb|AEP83812.2| cysteine endopeptidase EP8 [Secale cereale x Triticum durum]
          Length = 364

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 146/318 (45%), Positives = 212/318 (66%), Gaps = 13/318 (4%)

Query: 19  EDSISAKHELWMAQ---SARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEF 75
           E+++   +E W +    S R     AE+  RF +FK+N R+I + N++ ++ ++L+LN+F
Sbjct: 33  EENLRGLYERWRSHYTVSRRGLGADAEE-RRFNVFKENARYIHEGNKK-DRPFRLALNKF 90

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
           AD+T +EF  ++ G ++   ++S       +  F Y D+   LP ++DWR +GAVT +K+
Sbjct: 91  ADMTTDEFRRTYAGSRV-RHHLSLSGGRRGDGSFRYGDADN-LPPAVDWRQKGAVTAIKD 148

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYIIR 193
           QG CG CW FS + AVEGI KIRTG+L+SLSEQ+++DC    ++GC GG MD AF +I +
Sbjct: 149 QGQCGSCWAFSTIVAVEGINKIRTGKLVSLSEQELMDCDNVNNQGCDGGLMDYAFQFIHK 208

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDA 252
           + G+T E  YPYQ  +G C+  +    A  I  Y+DVP + E AL+ AV+ QPVSVAIDA
Sbjct: 209 N-GITTESNYPYQGEQGSCDLAKEKAHAVTIDGYEDVPANDESALQKAVAGQPVSVAIDA 267

Query: 253 SSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRR 311
           S   F++YS GVF G C  +L+H V  VGYG++ +G  YW++KNSWG++WGE G+IRM+R
Sbjct: 268 SGNDFQFYSEGVFTGECSTDLDHGVAAVGYGTTRDGTKYWIVKNSWGEDWGEKGYIRMQR 327

Query: 312 DVGGA-GLCGIARKASYP 328
            V  A G CGIA +ASYP
Sbjct: 328 GVSQAEGQCGIAMQASYP 345


>gi|172052260|gb|ACB70409.1| cysteine protease [Nicotiana tabacum]
          Length = 361

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 138/294 (46%), Positives = 189/294 (64%), Gaps = 10/294 (3%)

Query: 42  EKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPT-RNISNQ 100
           EK  RF +FK N  ++  FN++ ++ YKL LN+FAD+T+ EF   + G K+   R     
Sbjct: 53  EKDKRFNVFKANVHYVHNFNKK-DKPYKLKLNKFADMTNHEFRHHYAGSKIKHHRTFLGA 111

Query: 101 SQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTG 160
           S++     + + DS   +P ++DWR +GAVTPVK+QG CG CW FS V AVEGI +I+T 
Sbjct: 112 SRANGTFMYAHEDS---VPPTVDWRKKGAVTPVKDQGKCGSCWAFSTVVAVEGINQIKTN 168

Query: 161 RLISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGA 218
            L+SLSEQ+++DC  S ++GC GG MD AF +I +  G+  E  YPY    G C+ Q+  
Sbjct: 169 ELVSLSEQELVDCDTSQNQGCNGGLMDMAFEFIKKKGGINTEENYPYMAEGGECDIQKRN 228

Query: 219 MKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAV 277
                I  ++DV P  E +L  AV+ QPVSVAI AS   F++YS GVF G CG  L+H V
Sbjct: 229 SPVVSIDGHEDVPPNDEGSLLKAVANQPVSVAIQASGSDFQFYSEGVFTGDCGTELDHGV 288

Query: 278 TIVGYGSS-NEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
            IVGYG++ +   YW++KNSWG  WGE G+IRM+R++    GLCGIA + SYPI
Sbjct: 289 AIVGYGTTLDRTKYWIVKNSWGPEWGEKGYIRMQREIDAEEGLCGIAMQPSYPI 342


>gi|49387634|dbj|BAD25828.1| putative cysteine proteinase [Oryza sativa Japonica Group]
 gi|49388888|dbj|BAD26098.1| putative cysteine proteinase [Oryza sativa Japonica Group]
          Length = 358

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 143/309 (46%), Positives = 195/309 (63%), Gaps = 13/309 (4%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           W     R+Y +  E   RF ++++N  FI+  N  G+ TY+L+ NEFADLT+EEF+A++T
Sbjct: 50  WQGAHNRSYPSAEEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEEEFLATYT 109

Query: 89  GY---KMPTRN-ISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS-CGCCW 143
           GY     P  + +        +  F Y   R  +P S+DWRA+GAV P K+Q S C  CW
Sbjct: 110 GYYAGDGPVDDSVITTGAGDVDASFSY---RVDVPASVDWRAQGAVVPPKSQTSTCSSCW 166

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYIIRSQGLTDERV 202
            F   A +E +  I+TG+L+SLSEQQ++DC S   GC  G    A+ +++ + GLT E  
Sbjct: 167 AFVTAATIESLNMIKTGKLVSLSEQQLVDCDSYDGGCNLGSYGRAYKWVVENGGLTTEAD 226

Query: 203 YPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYS 261
           YPY  R G CN  + A  AA+I  +  VP  +E AL+ AV+RQPV+VAI+  S G ++Y 
Sbjct: 227 YPYTARRGPCNRAKSAHHAAKITGFGKVPPRNEAALQAAVARQPVAVAIEVGS-GMQFYK 285

Query: 262 GGVFAGPCGNNLNHAVTIVGYGS--SNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLC 319
           GGV+ GPCG  L HAVT+VGYG+  S+   YW IKNSWGQ+WGE G+IR+ RDVGG GLC
Sbjct: 286 GGVYTGPCGTRLAHAVTVVGYGTDASSGAKYWTIKNSWGQSWGERGYIRILRDVGGPGLC 345

Query: 320 GIARKASYP 328
           G+    +YP
Sbjct: 346 GVTLDIAYP 354


>gi|220983358|dbj|BAH11164.1| cysteine protease [Hordeum vulgare]
          Length = 462

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 142/329 (43%), Positives = 200/329 (60%), Gaps = 19/329 (5%)

Query: 10  SLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQ 66
           S+V      E+ +   +  WMA+   TY    E+  RF+ F+ N R+I++ N     G  
Sbjct: 26  SIVFYGERSEEEVRRMYAEWMAEHHSTYNPIGEEERRFEAFRNNLRYIDQHNAAADAGVH 85

Query: 67  TYKLSLNEFADLTDEEFIASHTGYKMP---TRNISNQSQSYANNWFGYPDSRRGLPRSID 123
           +++L LN FADLT+EE+ +++ G +      R +S + Q+  N+          LP S+D
Sbjct: 86  SFRLGLNRFADLTNEEYRSTYLGARTKPDRERKLSARYQAADNDE---------LPESVD 136

Query: 124 WRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYG 181
           WR +GAV  VK+QG CG CW FSA+AAVEGI +I TG +I LSEQ+++DC  S  +GC G
Sbjct: 137 WRKKGAVGAVKDQGGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQELVDCDTSYNQGCNG 196

Query: 182 GWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYA 240
           G MD AF +II + G+  E  YPY+ R+  C+  +   K   I  Y+DVP  SE +L+ A
Sbjct: 197 GLMDYAFEFIINNGGIDSEEDYPYKERDNRCDANKKNAKVVTIDGYEDVPVNSEKSLQKA 256

Query: 241 VSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQN 300
           V+ QP+SVAI+A    F+ Y  G+F G CG  L+H V  VGYG+ N   YWL++NSWG  
Sbjct: 257 VANQPISVAIEAGGRAFQLYKSGIFTGTCGTALDHGVAAVGYGTENGKDYWLVRNSWGSV 316

Query: 301 WGEGGFIRMRRDV-GGAGLCGIARKASYP 328
           WGE G+IRM R++   +G CGIA + SYP
Sbjct: 317 WGENGYIRMERNIKASSGKCGIAVEPSYP 345


>gi|334185815|ref|NP_680113.3| putative cysteine proteinase [Arabidopsis thaliana]
 gi|75313879|sp|Q9STL4.1|CEP2_ARATH RecName: Full=KDEL-tailed cysteine endopeptidase CEP2; Flags:
           Precursor
 gi|4678354|emb|CAB41164.1| cysteine endopeptidase-like protein [Arabidopsis thaliana]
 gi|332644882|gb|AEE78403.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 361

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 138/315 (43%), Positives = 197/315 (62%), Gaps = 6/315 (1%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           E+ +S  ++ W +  +   ++  E+  RF +F+ N   +   N++ N++YKL LN+FADL
Sbjct: 31  EEGLSTLYDRWRSHHS-VPRSLNEREKRFNVFRHNVMHVHNTNKK-NRSYKLKLNKFADL 88

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
           T  EF  ++TG  +    +    +  +  +    ++   LP S+DWR +GAVT +KNQG 
Sbjct: 89  TINEFKNAYTGSNIKHHRMLQGPKRGSKQFMYDHENLSKLPSSVDWRKKGAVTEIKNQGK 148

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR--GCYGGWMDDAFSYIIRSQG 196
           CG CW FS VAAVEGI KI+T +L+SLSEQ+++DC   +  GC GG M+ AF +I ++ G
Sbjct: 149 CGSCWAFSTVAAVEGINKIKTNKLVSLSEQELVDCDTKQNEGCNGGLMEIAFEFIKKNGG 208

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSP 255
           +T E  YPY+  +G C+  +       I  ++DVP   E AL  AV+ QPVSVAIDA S 
Sbjct: 209 ITTEDSYPYEGIDGKCDASKDNGVLVTIDGHEDVPENDENALLKAVANQPVSVAIDAGSS 268

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG 315
            F++YS GVF G CG  LNH V  VGYGS     YW+++NSWG  WGEGG+I++ R++  
Sbjct: 269 DFQFYSEGVFTGSCGTELNHGVAAVGYGSERGKKYWIVRNSWGAEWGEGGYIKIEREIDE 328

Query: 316 -AGLCGIARKASYPI 329
             G CGIA +ASYPI
Sbjct: 329 PEGRCGIAMEASYPI 343


>gi|115479933|ref|NP_001063560.1| Os09g0497500 [Oryza sativa Japonica Group]
 gi|113631793|dbj|BAF25474.1| Os09g0497500 [Oryza sativa Japonica Group]
 gi|215704298|dbj|BAG93138.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 349

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 145/327 (44%), Positives = 197/327 (60%), Gaps = 20/327 (6%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +  + E WM +  R Y +  EK  RF+++++N   +E FN   N  YKL+ N+FADLT
Sbjct: 25  DLMLDRFEQWMIRHGRAYTDAGEKQRRFEVYRRNVELVETFNSMSN-GYKLADNKFADLT 83

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYP--DSRRGLPRSIDWRARGAVTPVKNQG 137
           +EEF A   G++ P   I   S + + +    P   S   LP+S+DWR +GAV  VKNQG
Sbjct: 84  NEEFRAKMLGFR-PHVTIPQISNTCSAD-IAMPGESSDDILPKSVDWRKKGAVVEVKNQG 141

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQG 196
            CG CW FSAVAA+EGI +I+ G L+SLSEQ+++DC   + GC GG+M  AF +++ + G
Sbjct: 142 DCGSCWAFSAVAAIEGINQIKNGELVSLSEQELVDCDDEAVGCGGGYMSWAFEFVVGNHG 201

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSP 255
           LT E  YPY    G C   +    A  I  Y++V P+SE  L  A + QPVSVA+D  S 
Sbjct: 202 LTTEASYPYHAANGACQAAKLNQSAVAIAGYRNVTPSSEPDLARAAAAQPVSVAVDGGSF 261

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-----------YWLIKNSWGQNWGEG 304
            F+ Y  GV+ GPC  ++NH VT+VGYG S               YW++KNSWG  WG+ 
Sbjct: 262 MFQLYGSGVYTGPCTADVNHGVTVVGYGESEPKTDGGGAAKGGEKYWIVKNSWGAEWGDA 321

Query: 305 GFIRMRRDVGG--AGLCGIARKASYPI 329
           G+I M+RDV G  +GLCGIA   SYP+
Sbjct: 322 GYILMQRDVAGLASGLCGIALLPSYPV 348


>gi|1173630|gb|AAB37233.1| cysteine proteinase [Phalaenopsis sp. SM9108]
          Length = 359

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 143/317 (45%), Positives = 201/317 (63%), Gaps = 8/317 (2%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           EDS+   +E W +    + ++  EK  RF +FK+N R+I  FN+  +  YKL LN+FADL
Sbjct: 31  EDSLWNLYERWRSHHTVS-RDLDEKQKRFNVFKENPRYIHDFNKRKDIPYKLRLNKFADL 89

Query: 79  TDEEFIASHTGYKM-PTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRARGAVTPVKNQ 136
           T+ EF +++ G ++   R++    +  A N F Y     R LP SIDWR +GAVT VK+Q
Sbjct: 90  TNHEFRSTYAGSRINHHRSLRGSRRGGATNSFMYQSLDSRSLPASIDWRQKGAVTAVKDQ 149

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR--GCYGGWMDDAFSYIIRS 194
           G CG CW FS VAAVEGI +I+T +L+SLSEQ+++DC      GC GG MD AF +I ++
Sbjct: 150 GQCGSCWAFSTVAAVEGINQIKTKKLLSLSEQELIDCDTDENNGCNGGLMDYAFDFIKKN 209

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDAS 253
            G++ E  YPY   + YC  ++ +     I  ++DVP + E +L  AV+ QPVS+AI+AS
Sbjct: 210 GGISSEAEYPYAAEDSYCATEKKS-HVVSIDGHEDVPANDEDSLLKAVANQPVSIAIEAS 268

Query: 254 SPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRD 312
              F++YS GVF G  G  L+H V IVGYG + +G  YW+++NSWG  WGE G+IR+   
Sbjct: 269 GYDFQFYSEGVFTGRSGTELDHGVAIVGYGKTQQGTKYWIVRNSWGAEWGEKGYIRISAA 328

Query: 313 VGGAGLCGIARKASYPI 329
                LCG+A +ASYPI
Sbjct: 329 SDSKRLCGLAMEASYPI 345


>gi|218195711|gb|EEC78138.1| hypothetical protein OsI_17694 [Oryza sativa Indica Group]
          Length = 458

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 139/310 (44%), Positives = 193/310 (62%), Gaps = 17/310 (5%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEFADLTDEEFIA 85
           W A+  + Y    E+  R+  F+ N R+I++ N     G  +++L LN FADLT+EE+  
Sbjct: 43  WKAEHGKNYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRD 102

Query: 86  SHTGYKMPTRNISNQSQSY--ANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCW 143
           ++ G +   R     S  Y  A+N          LP S+DWR +GAV  +K+QG CG CW
Sbjct: 103 TYLGLRNKPRRERKVSDRYLAADN--------EALPESVDWRTKGAVAEIKDQGGCGSCW 154

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDER 201
            FSA+AAVEGI +I TG LISLSEQ+++DC  S   GC GG MD AF +II + G+  E 
Sbjct: 155 AFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGGIDTED 214

Query: 202 VYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGFRYY 260
            YPY+ ++  C+  R   K   I SY+DV P SE +L+ AV+ QPVSVAI+A    F+ Y
Sbjct: 215 DYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQPVSVAIEAGGRAFQLY 274

Query: 261 SGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV-GGAGLC 319
           S G+F G CG  L+H V  VGYG+ N   YW+++NSWG++WGE G++RM R++   +G C
Sbjct: 275 SSGIFTGKCGTALDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMERNIKASSGKC 334

Query: 320 GIARKASYPI 329
           GIA + SYP+
Sbjct: 335 GIAVEPSYPL 344


>gi|357446979|ref|XP_003593765.1| Cysteine proteinase [Medicago truncatula]
 gi|355482813|gb|AES64016.1| Cysteine proteinase [Medicago truncatula]
          Length = 364

 Score =  272 bits (696), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 153/312 (49%), Positives = 202/312 (64%), Gaps = 12/312 (3%)

Query: 24  AKHELWMAQSARTYKNQ--AEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDE 81
           AK+E   A   +  +N   +E   R +IFK N  +IE FN  GN++YKL LN+++DLT +
Sbjct: 58  AKYETNSAFEFKATQNDKISELEKRKRIFKNNLEYIENFNNAGNKSYKLGLNQYSDLTSD 117

Query: 82  EFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGC 141
           EF+ASHTG K+ ++ +S+     A   F   D    +P + DWR +GAVT VK+QGSCGC
Sbjct: 118 EFLASHTGLKV-SKQLSSSKMRSAAVPFNLNDD---VPTNFDWRQQGAVTDVKDQGSCGC 173

Query: 142 CWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQGLTDE 200
           CW FS VAAVEG  KI TG LISLSEQQ++DC   + GC+GG MD AF YII+ +G+  E
Sbjct: 174 CWAFSVVAAVEGAVKINTGELISLSEQQLVDCDERNSGCHGGNMDSAFKYIIQ-KGIVSE 232

Query: 201 RVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRY 259
             YPYQ     C         A+I ++ DVP + E  L  AV++QPVSV I+     F++
Sbjct: 233 ADYPYQEGSQTCQLNDQMKFEAQITNFIDVPANDEQQLLQAVAQQPVSVGIEVGDE-FQH 291

Query: 260 YSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGG-AG 317
           Y G V++G CG ++NHAVT VGYG S +G  YWLIKNSWG+ WGE G++++ R+ G   G
Sbjct: 292 YMGDVYSGTCGQSMNHAVTAVGYGVSEDGTKYWLIKNSWGKGWGEEGYMKLLRESGEPGG 351

Query: 318 LCGIARKASYPI 329
            CGIA  ASYPI
Sbjct: 352 QCGIAAHASYPI 363


>gi|30141025|dbj|BAC75926.1| cysteine protease-4 [Helianthus annuus]
          Length = 352

 Score =  272 bits (696), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 144/308 (46%), Positives = 192/308 (62%), Gaps = 15/308 (4%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           E W+A+ ++ Y++  EK  RF+IF  N + I+  N++ +  Y L LNEFADLT EEF   
Sbjct: 50  ESWLAKHSKIYESLDEKLHRFEIFMDNLKHIDDTNKKVSN-YWLGLNEFADLTHEEFKNK 108

Query: 87  HTGYK--MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWI 144
             G K  +P R   +  +      F Y D    LP+S+DWR +GAV PVKNQG CG CW 
Sbjct: 109 FLGLKGELPERKDESIEE------FSYRDFVD-LPKSVDWRKKGAVAPVKNQGQCGSCWA 161

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERV 202
           FS VAAVEGI +I TG L  LSEQ+++DC  +   GC GG MD AF+Y++RS GL  E  
Sbjct: 162 FSTVAAVEGINQIVTGNLTMLSEQELIDCDTTFNNGCNGGLMDYAFAYVMRS-GLHKEEE 220

Query: 203 YPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYS 261
           YPY   EG C+ ++   +   I  Y DVP  +E +   A++ QP+SVAI+AS   F++YS
Sbjct: 221 YPYIMSEGTCDEKKDVSETVTISGYHDVPRNNEDSFLKALANQPISVAIEASGRDFQFYS 280

Query: 262 GGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCG 320
           GGVF G CG  L+H V  VGYG++    Y +++NSWG  WGE G+IRM+R  G   G+CG
Sbjct: 281 GGVFDGHCGTELDHGVAAVGYGTTKGLDYVIVRNSWGPKWGEKGYIRMKRKTGKPHGMCG 340

Query: 321 IARKASYP 328
           +   ASYP
Sbjct: 341 LYMMASYP 348


>gi|357130488|ref|XP_003566880.1| PREDICTED: fruit bromelain-like [Brachypodium distachyon]
          Length = 356

 Score =  272 bits (696), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 146/317 (46%), Positives = 194/317 (61%), Gaps = 15/317 (4%)

Query: 25  KHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFI 84
           +HE WMA+  R Y +  EKA R ++F  N R+++  NR GN+TY L LN+F+DLTD+EF+
Sbjct: 38  RHEEWMAKFGRVYTDAQEKARRQEVFGANARYVDAVNRAGNRTYTLGLNKFSDLTDDEFV 97

Query: 85  ASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWI 144
            +H GY+   +      +   +        +  +P S+DWRA+GAVT VKNQGSCGCCW 
Sbjct: 98  QTHLGYRGHQQGGLRPEEENVSKVAALGYGQADMPESVDWRAQGAVTGVKNQGSCGCCWA 157

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDCSG-------SRGCYGGWMDDAFSYIIRSQGL 197
           F+AVAA EG+ KI TG LIS+SEQQVLDC+G       +  C GG +DDA  Y+  S+GL
Sbjct: 158 FAAVAATEGLVKIATGNLISMSEQQVLDCTGQSPGMGNTNTCDGGHIDDALRYVAASRGL 217

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT--SELALRYAVSRQPVSVAIDASSP 255
             E  Y Y   +G C        AA     Q V     E  L+  V+ QP++V+++AS  
Sbjct: 218 QPEAAYAYTGLQGACQSGFTPNSAASFGEPQTVTLQGDEGRLQGLVAGQPIAVSVEASDD 277

Query: 256 GFRYYSGGVFAG---PCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRR 311
            FR+Y  GVF      CG  LNHAVT+VGYGS++ G  YWL+KN WG +WGEGG++R+ R
Sbjct: 278 -FRHYMSGVFTAGTSSCGQRLNHAVTVVGYGSADGGQEYWLVKNQWGTSWGEGGYMRIAR 336

Query: 312 DVGGAGLCGIARKASYP 328
              GA  CGI+  A YP
Sbjct: 337 G-NGAPNCGISAYAYYP 352


>gi|297843430|ref|XP_002889596.1| hypothetical protein ARALYDRAFT_887827 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297335438|gb|EFH65855.1| hypothetical protein ARALYDRAFT_887827 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 343

 Score =  272 bits (696), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 136/313 (43%), Positives = 191/313 (61%), Gaps = 12/313 (3%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTD 80
           ++  + E W+   ++ Y  + E  +RF I++ N + I+  N   +  +KL+ N FAD+T+
Sbjct: 38  TLKQRFEKWLKTHSKLYGGRDEWMLRFGIYQSNVQLIDYINSL-HLPFKLTDNRFADMTN 96

Query: 81  EEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCG 140
            EF A   G    +  +  + +          D    +P ++DWR +GAVTP++NQG CG
Sbjct: 97  SEFKAHFLGLNTSSLRLHKKQRPVC-------DPAGNVPDAVDWRTQGAVTPIRNQGKCG 149

Query: 141 CCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSRGCYGGWMDDAFSYIIRSQGL 197
            CW FSAVAA+EGI KI+TG L+SLSEQQ++DC   + ++GC GG M+ AF +I  + GL
Sbjct: 150 GCWAFSAVAAIEGINKIKTGNLVSLSEQQLIDCDVGTYNKGCSGGLMETAFEFIKSNGGL 209

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGF 257
           T E  YPY   EG C+ ++   K   I+ YQ V  +E +L+ A ++QPVSV IDA    F
Sbjct: 210 TTETDYPYTGIEGTCDQEKAKNKVVTIQGYQKVAQNEASLQIAAAQQPVSVGIDAGGFIF 269

Query: 258 RYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG-GA 316
           + YS GVF   CG NLNH VT+VGYG   +  YW++KNSWG  WGE G+IRM R +    
Sbjct: 270 QLYSSGVFTSYCGTNLNHGVTVVGYGVEGDQKYWIVKNSWGTGWGEEGYIRMERGISEDT 329

Query: 317 GLCGIARKASYPI 329
           G CGIA  ASYP+
Sbjct: 330 GKCGIAMLASYPL 342


>gi|118158|sp|P12412.1|CYSEP_VIGMU RecName: Full=Vignain; AltName: Full=Bean endopeptidase; AltName:
           Full=Cysteine proteinase; AltName:
           Full=Sulfhydryl-endopeptidase; Short=SH-EP; Contains:
           RecName: Full=Vignain-1; Contains: RecName:
           Full=Vignain-2; Flags: Precursor
 gi|22062|emb|CAA33753.1| sulfhydryl-pre-endopeptidase (AA -20 to 342) [Vigna mungo]
 gi|22066|emb|CAA36181.1| sulfhydryl-endopeptidase [Vigna mungo]
          Length = 362

 Score =  272 bits (696), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 143/326 (43%), Positives = 207/326 (63%), Gaps = 13/326 (3%)

Query: 14  SRTLHEDSISAKHELW-MAQSARTY----KNQAEKAMRFKIFKKNFRFIEKFNREGNQTY 68
           S   HE  + ++  LW + +  R++    ++  EK  RF +FK N   +   N+  ++ Y
Sbjct: 22  SFDFHEKDLESEESLWDLYERWRSHHTVSRSLGEKHKRFNVFKANVMHVHNTNKM-DKPY 80

Query: 69  KLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARG 128
           KL LN+FAD+T+ EF +++ G K+    +   SQ + +  F Y +    +P S+DWR +G
Sbjct: 81  KLKLNKFADMTNHEFRSTYAGSKVNHHKMFRGSQ-HGSGTFMY-EKVGSVPASVDWRKKG 138

Query: 129 AVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDD 186
           AVT VK+QG CG CW FS + AVEGI +I+T +L+SLSEQ+++DC    ++GC GG M+ 
Sbjct: 139 AVTDVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDKEENQGCNGGLMES 198

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQP 245
           AF +I +  G+T E  YPY  +EG C+  +    A  I  +++VP + E AL  AV+ QP
Sbjct: 199 AFEFIKQKGGITTESNYPYTAQEGTCDESKVNDLAVSIDGHENVPVNDENALLKAVANQP 258

Query: 246 VSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEG 304
           VSVAIDA    F++YS GVF G C  +LNH V IVGYG++ +G  YW+++NSWG  WGE 
Sbjct: 259 VSVAIDAGGSDFQFYSEGVFTGDCNTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEQ 318

Query: 305 GFIRMRRDVG-GAGLCGIARKASYPI 329
           G+IRM+R++    GLCGIA  ASYPI
Sbjct: 319 GYIRMQRNISKKEGLCGIAMMASYPI 344


>gi|118124|sp|P25250.1|CYSP2_HORVU RecName: Full=Cysteine proteinase EP-B 2; Flags: Precursor
 gi|1146118|gb|AAA85036.1| cysteine proteinase EPB2 precursor [Hordeum vulgare subsp. vulgare]
          Length = 373

 Score =  272 bits (696), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 149/322 (46%), Positives = 195/322 (60%), Gaps = 18/322 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           E+++   +E W + + R  ++ AEK  RF  FK N  FI   N+ G+  Y+L LN F D+
Sbjct: 39  EEALWDLYERWQS-AHRVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDM 97

Query: 79  TDEEFIASHTG---YKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
              EF A+  G      P++  S     YA       D    LP S+DWR +GAVT VK+
Sbjct: 98  DQAEFRATFVGDLRRDTPSKPPSVPGFMYAA--LNVSD----LPPSVDWRQKGAVTGVKD 151

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIR 193
           QG CG CW FS V +VEGI  IRTG L+SLSEQ+++DC  + + GC GG MD+AF YI  
Sbjct: 152 QGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKN 211

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKA---ARIRSYQDVP-TSELALRYAVSRQPVSVA 249
           + GL  E  YPY+   G CN  R A  +     I  +QDVP  SE  L  AV+ QPVSVA
Sbjct: 212 NGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVA 271

Query: 250 IDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIR 308
           ++AS   F +YS GVF G CG  L+H V +VGYG + +G  YW +KNSWG +WGE G+IR
Sbjct: 272 VEASGKAFMFYSEGVFTGECGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIR 331

Query: 309 MRRDVGGA-GLCGIARKASYPI 329
           + +D G + GLCGIA +ASYP+
Sbjct: 332 VEKDSGASGGLCGIAMEASYPV 353


>gi|297799636|ref|XP_002867702.1| hypothetical protein ARALYDRAFT_329301 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313538|gb|EFH43961.1| hypothetical protein ARALYDRAFT_329301 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 357

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 142/309 (45%), Positives = 197/309 (63%), Gaps = 13/309 (4%)

Query: 27  ELWMAQSARTYKNQ-AEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIA 85
           ++WM++  +TY N   EK  RF+ FK N RFI++ N + N +Y+L L  FADLT +E+  
Sbjct: 49  QMWMSKHGKTYTNALGEKERRFQNFKDNLRFIDQHNAK-NLSYQLGLTRFADLTVQEYRD 107

Query: 86  SHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIF 145
              G   P +     S+ Y       P     LP S+DWR  GAV+ +K+QG+C  CW F
Sbjct: 108 LFPGSPKPKQRNLRISRRYV------PLDGDQLPESVDWRNEGAVSAIKDQGTCNSCWAF 161

Query: 146 SAVAAVEGITKIRTGRLISLSEQQVLDCS-GSRGCYG-GWMDDAFSYIIRSQGLTDERVY 203
           S VAAVEGI KI TG L+SLSEQ+++DC+  + GCYG G MD AF ++I + GL  +  Y
Sbjct: 162 STVAAVEGINKIVTGELVSLSEQELVDCNLVNNGCYGSGTMDAAFQFLINNGGLDSDTDY 221

Query: 204 PYQRREGYCNWQRG-AMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYS 261
           PYQ  +GYCN +   + K   I SY+DVP + E++L+ AV+ QPVSV +D  S  F  Y 
Sbjct: 222 PYQGSQGYCNRKESTSNKIITIDSYEDVPANDEISLQKAVAHQPVSVGVDKKSQEFMLYR 281

Query: 262 GGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG-GAGLCG 320
            G++ GPCG +L+HA+ IVGYGS N   YW+++NSWG  WG+ G+ +M R+    +G+CG
Sbjct: 282 SGIYNGPCGTDLDHALVIVGYGSENGQDYWIVRNSWGTTWGDAGYAKMARNFEYPSGVCG 341

Query: 321 IARKASYPI 329
           IA  ASYP+
Sbjct: 342 IAMLASYPV 350


>gi|121308860|dbj|BAF43527.1| cysteine proteinase [Zinnia elegans]
          Length = 352

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 143/306 (46%), Positives = 192/306 (62%), Gaps = 11/306 (3%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           E W+ + ++ Y++  EK  RF+IF  N + I++ N++ +  Y L LNEFADLT EEF   
Sbjct: 50  ESWLVKHSKFYESLDEKLHRFEIFMDNLKHIDETNKKVSN-YWLGLNEFADLTHEEFKHK 108

Query: 87  HTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFS 146
             G+K       ++S    +  FGY D    LP+S+DWR +GAV PVKNQG CG CW FS
Sbjct: 109 FLGFKGELAERKDES----SKEFGYRDFVD-LPKSVDWRKKGAVAPVKNQGQCGNCWAFS 163

Query: 147 AVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERVYP 204
            VAAVEGI +I TG L  LSEQ+++DC  +   GC GG MD AF+Y++RS GL  E  YP
Sbjct: 164 TVAAVEGINQIVTGNLTMLSEQELIDCDTTFNNGCNGGLMDYAFAYVMRS-GLHKEEEYP 222

Query: 205 YQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGG 263
           Y   EG C+ ++   +   I  Y DVP   E +   A++ QP+SVAI+AS   F++YSGG
Sbjct: 223 YIMSEGTCDEKKDVSEKVTISGYHDVPRNDEASFLKALANQPISVAIEASGRDFQFYSGG 282

Query: 264 VFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIA 322
           VF G CG  L+H V  VGYG++    Y +++NSWG  WGE G+IRM+R  G   G+CG+ 
Sbjct: 283 VFDGHCGTELDHGVAAVGYGTTKGLDYVIVRNSWGPKWGEKGYIRMKRGSGKPHGMCGLY 342

Query: 323 RKASYP 328
             ASYP
Sbjct: 343 MMASYP 348


>gi|357507505|ref|XP_003624041.1| Cysteine proteinase [Medicago truncatula]
 gi|355499056|gb|AES80259.1| Cysteine proteinase [Medicago truncatula]
          Length = 342

 Score =  271 bits (694), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/316 (46%), Positives = 199/316 (62%), Gaps = 22/316 (6%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTD 80
           S+S + E W  +    YK+ AE+   F+IFK N  +I+ FN  GN+ YKL++N F D   
Sbjct: 37  SLSERFEYWKTKYGVVYKDVAEQKKHFQIFKHNVAYIDYFNAAGNKPYKLAINRFVDKPI 96

Query: 81  EEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCG 140
           E+   S  G++  T      +  Y N           +P ++DWR RGAVTP+KNQG CG
Sbjct: 97  ED---SDDGFERTTTTTPTTTFKYEN--------VTDIPATVDWRKRGAVTPIKNQGKCG 145

Query: 141 CCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---RGCYGGWMDDAFSYIIRSQGL 197
            CW FSAVAA+EGI KI +G L+SLSEQQ++DC  S   +GC  G M +AF +I+ + G+
Sbjct: 146 SCWAFSAVAAIEGIQKITSGNLVSLSEQQLVDCDRSGRTKGCDNGNMINAFKFILENGGI 205

Query: 198 TDERVYPYQR-REGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSP 255
             E  YPY+R  +G C   +      +I+SY++VP+ SE +L  AV+ QPVSV ID    
Sbjct: 206 ATEANYPYKRVVKGTC---KKVSHKVQIKSYEEVPSNSEDSLLKAVANQPVSVGIDMRGM 262

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVG 314
            F++YS G+F G CG   NHA+TIVGYG+S +G  YWL+KNSW + WGE G+IR++RD+ 
Sbjct: 263 -FKFYSSGIFTGECGTKPNHALTIVGYGTSKDGIKYWLVKNSWSKRWGEKGYIRIKRDID 321

Query: 315 GA-GLCGIARKASYPI 329
              GLCGIA K SYPI
Sbjct: 322 AKEGLCGIAMKPSYPI 337


>gi|38345188|emb|CAE03344.2| OSJNBb0005B05.11 [Oryza sativa Japonica Group]
 gi|125589403|gb|EAZ29753.1| hypothetical protein OsJ_13812 [Oryza sativa Japonica Group]
          Length = 323

 Score =  271 bits (694), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 143/339 (42%), Positives = 207/339 (61%), Gaps = 35/339 (10%)

Query: 1   MLIIMVTWASLVMSRTLHEDS-ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           +L  +   ++++ +R L +D+ ++A+HE WMAQ  R YK+ AEKA RF++FK N  FIE 
Sbjct: 11  ILGCLCLCSAVLAARELSDDAAMAARHERWMAQYGRMYKDDAEKARRFEVFKANVAFIES 70

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHT--GYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           FN  GN  + L +N+FADLT++EF ++ T  G+   T  +    ++   N          
Sbjct: 71  FN-AGNHKFWLGVNQFADLTNDEFRSTKTNKGFIPSTTRVPTGFRNENVNI-------DA 122

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           LP ++DWR +G VTP+K+QG CGCCW FSAVAA+E                +++DC    
Sbjct: 123 LPATMDWRTKGVVTPIKDQGQCGCCWAFSAVAAME----------------ELVDCDVHG 166

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TS 233
             +GC GG MDDAF +II++ GLT E  YPY   +    ++  +   A I+ Y+DVP  +
Sbjct: 167 EDQGCEGGLMDDAFKFIIKNGGLTTESNYPYAAVDD--KFKSVSNSVASIKGYEDVPANN 224

Query: 234 ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWL 292
           E AL  AV+ QPVSVA+D     F++Y GGV  G CG +L+H +  +GYG +++G  YWL
Sbjct: 225 EAALMKAVANQPVSVAVDGGDMTFQFYKGGVMTGSCGTDLDHGIVAIGYGKASDGTKYWL 284

Query: 293 IKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPIA 330
           +KNSWG  WGE GF+RM +D+    G+CG+A + SYP A
Sbjct: 285 LKNSWGMTWGENGFLRMEKDISDKRGMCGLAMEPSYPTA 323


>gi|297816028|ref|XP_002875897.1| hypothetical protein ARALYDRAFT_347926 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297321735|gb|EFH52156.1| hypothetical protein ARALYDRAFT_347926 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 361

 Score =  271 bits (694), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 138/315 (43%), Positives = 198/315 (62%), Gaps = 6/315 (1%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           E+ +S  ++ W +  +   ++  E+  RF +F+ N   +   N++ N++YKL LN+FADL
Sbjct: 31  EEGLSKLYDRWRSHHS-VPRSLHEREKRFNVFRHNVMHVHNSNKK-NRSYKLKLNKFADL 88

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
           T  EF  ++TG K+    +    +  +  +    ++   LP S+DWR +GAVT +KNQG 
Sbjct: 89  TIHEFKNAYTGSKIKHHRMLQGPKRGSKQFMYDHENVSKLPSSVDWRKKGAVTEIKNQGK 148

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR--GCYGGWMDDAFSYIIRSQG 196
           CG CW FS VAAVEGI KI+T +L+SLSEQ+++DC  ++  GC GG M+ AF +I ++ G
Sbjct: 149 CGSCWAFSTVAAVEGINKIKTNKLVSLSEQELVDCDTNQNEGCNGGLMEIAFEFIKKNGG 208

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSP 255
           +T E  YPY+  +G C+  +       I  +++VP   E AL  AV+ QPVSVAIDA S 
Sbjct: 209 ITTEDSYPYEGIDGKCDASKDNGVLVTIDGHENVPENDENALLKAVANQPVSVAIDAGSS 268

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG 315
            F++YS GVF G CG  LNH V  VGYGS     YW+++NSWG  WGEGG+I++ R +  
Sbjct: 269 DFQFYSEGVFTGDCGTELNHGVATVGYGSQGGKKYWIVRNSWGTEWGEGGYIKIERGIDE 328

Query: 316 -AGLCGIARKASYPI 329
             G CGIA +ASYPI
Sbjct: 329 PEGRCGIAMEASYPI 343


>gi|3980198|emb|CAA46863.1| thiolprotease [Pisum sativum]
          Length = 464

 Score =  271 bits (694), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 147/340 (43%), Positives = 200/340 (58%), Gaps = 20/340 (5%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           M II         S     D +   +E W+ +  + Y    EK  RF+IFK N  FI++ 
Sbjct: 22  MCIISYDKTHPDKSTPRTNDQVLTMYEEWLVKHGKNYNALGEKEKRFEIFKDNLGFIDEH 81

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMP----TRNISNQSQSYANNWFGYPDSRR 116
           N + N +++L LN FADLT+EE+     G ++      R +++Q+  YA        +R 
Sbjct: 82  NSK-NLSFRLGLNRFADLTNEEYRTRFLGTRINPNRRNRKVNSQTNRYA--------TRV 132

Query: 117 G--LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS 174
           G  LP S+DWR  GAV  VK+QGSCG CW FSA+AAVEG+ K+ TG LISLSEQ+++DC 
Sbjct: 133 GDKLPESVDWRKEGAVVGVKDQGSCGSCWAFSAIAAVEGVNKLATGDLISLSEQELVDCD 192

Query: 175 GS--RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT 232
            S   GC GG MD AF +II    LT E  YPY+  +G C+  R   K   I  Y+DVP 
Sbjct: 193 TSYNEGCNGGLMDYAFEFIINMVALTPEEDYPYRAIDGRCDQNRKNAKVVSIDQYEDVPA 252

Query: 233 -SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYW 291
             E AL+ AV+ Q ++VA++     F+ Y  GVF G CG  L+H V  VGYG+ N   YW
Sbjct: 253 YDEGALKKAVANQVIAVAVEGGGREFQLYDSGVFTGRCGTALDHGVAAVGYGTENGKDYW 312

Query: 292 LIKNSWGQNWGEGGFIRMRRDVGG--AGLCGIARKASYPI 329
           +++NSWG +WGE G+IR+ R++    +G CGIA + SYPI
Sbjct: 313 IVRNSWGGSWGEAGYIRLERNLATSKSGKCGIAIEPSYPI 352


>gi|118120|sp|P25249.1|CYSP1_HORVU RecName: Full=Cysteine proteinase EP-B 1; Flags: Precursor
 gi|1146116|gb|AAA85035.1| cysteine proteinase EPB1 precursor [Hordeum vulgare subsp. vulgare]
          Length = 371

 Score =  271 bits (694), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 149/322 (46%), Positives = 194/322 (60%), Gaps = 18/322 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           E+++   +E W + + R  ++ AEK  RF  FK N  FI   N+ G+  Y+L LN F D+
Sbjct: 39  EEALWDLYERWQS-AHRVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDM 97

Query: 79  TDEEFIASHTG---YKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
              EF A+  G      P +  S     YA       D    LP S+DWR +GAVT VK+
Sbjct: 98  DQAEFRATFVGDLRRDTPAKPPSVPGFMYAA--LNVSD----LPPSVDWRQKGAVTGVKD 151

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIR 193
           QG CG CW FS V +VEGI  IRTG L+SLSEQ+++DC  + + GC GG MD+AF YI  
Sbjct: 152 QGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKN 211

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKA---ARIRSYQDVP-TSELALRYAVSRQPVSVA 249
           + GL  E  YPY+   G CN  R A  +     I  +QDVP  SE  L  AV+ QPVSVA
Sbjct: 212 NGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVA 271

Query: 250 IDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIR 308
           ++AS   F +YS GVF G CG  L+H V +VGYG + +G  YW +KNSWG +WGE G+IR
Sbjct: 272 VEASGKAFMFYSEGVFTGDCGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIR 331

Query: 309 MRRDVGGA-GLCGIARKASYPI 329
           + +D G + GLCGIA +ASYP+
Sbjct: 332 VEKDSGASGGLCGIAMEASYPV 353


>gi|18390634|ref|NP_563764.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|8844131|gb|AAF80223.1|AC025290_12 Contains similarity to a cysteine endopeptidase 1 from Phaseolus
           vulgaris gb|U52970 and is a member of the papain
           cysteine protease family PF|00112 [Arabidopsis thaliana]
 gi|332189848|gb|AEE27969.1| cysteine proteinase-like protein [Arabidopsis thaliana]
          Length = 343

 Score =  271 bits (693), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 136/313 (43%), Positives = 190/313 (60%), Gaps = 12/313 (3%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTD 80
           ++  + E W+   ++ Y  + E  +RF I++ N + I+  N   +  +KL+ N FAD+T+
Sbjct: 38  TLKQRFEKWLKTHSKLYGGRDEWMLRFGIYQSNVQLIDYINSL-HLPFKLTDNRFADMTN 96

Query: 81  EEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCG 140
            EF A   G    +  +  + +          D    +P ++DWR +GAVTP++NQG CG
Sbjct: 97  SEFKAHFLGLNTSSLRLHKKQRPVC-------DPAGNVPDAVDWRTQGAVTPIRNQGKCG 149

Query: 141 CCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSRGCYGGWMDDAFSYIIRSQGL 197
            CW FSAVAA+EGI KI+TG L+SLSEQQ++DC   + ++GC GG M+ AF +I  + GL
Sbjct: 150 GCWAFSAVAAIEGINKIKTGNLVSLSEQQLIDCDVGTYNKGCSGGLMETAFEFIKTNGGL 209

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGF 257
             E  YPY   EG C+ ++   K   I+ YQ V  +E +L+ A ++QPVSV IDA    F
Sbjct: 210 ATETDYPYTGIEGTCDQEKSKNKVVTIQGYQKVAQNEASLQIAAAQQPVSVGIDAGGFIF 269

Query: 258 RYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG-GA 316
           + YS GVF   CG NLNH VT+VGYG   +  YW++KNSWG  WGE G+IRM R V    
Sbjct: 270 QLYSSGVFTNYCGTNLNHGVTVVGYGVEGDQKYWIVKNSWGTGWGEEGYIRMERGVSEDT 329

Query: 317 GLCGIARKASYPI 329
           G CGIA  ASYP+
Sbjct: 330 GKCGIAMMASYPL 342


>gi|449469929|ref|XP_004152671.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus]
 gi|449529596|ref|XP_004171784.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus]
          Length = 431

 Score =  270 bits (691), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 138/311 (44%), Positives = 187/311 (60%), Gaps = 11/311 (3%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTD 80
           ++S   E+W  +  ++Y +  EK  R  +F  N+ F+   N   N +Y LSLN +ADLT 
Sbjct: 24  NVSELFEIWCTEHGKSYSSAEEKLYRLGVFADNYEFVTHHNNLDNSSYTLSLNSYADLTH 83

Query: 81  EEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCG 140
            EF  S  G+    RN               P   R +P S+DWR +GAVT VK+QGSCG
Sbjct: 84  HEFKVSRLGFSPALRNFRPVLPQE-------PSLPRDVPDSLDWRKKGAVTAVKDQGSCG 136

Query: 141 CCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLT 198
            CW FSA  A+EGI +I TG LISLSEQ+++DC  S   GC GG MD A+ ++I + G+ 
Sbjct: 137 ACWSFSATGAMEGINQIMTGSLISLSEQELIDCDRSYNSGCGGGLMDYAYQFVISNHGID 196

Query: 199 DERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGF 257
            E  YPYQ R+G C   +       I  Y D+P++ E  L  AV+ QPVSV I  S   F
Sbjct: 197 TENDYPYQARDGSCRKDKLQRNVVTIDGYADIPSNDEGKLLQAVAAQPVSVGICGSERAF 256

Query: 258 RYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA- 316
           + YS G+F+GPC  +L+HAV IVGYGS N   YW++KNSWG++WG  G++ M+R+ G + 
Sbjct: 257 QLYSKGIFSGPCSTSLDHAVLIVGYGSENGVDYWIVKNSWGKSWGMDGYMHMQRNSGNSE 316

Query: 317 GLCGIARKASY 327
           G+CGI + ASY
Sbjct: 317 GVCGINKLASY 327


>gi|2224812|emb|CAB09699.1| cysteine endopeptidase EP-A [Hordeum vulgare subsp. vulgare]
          Length = 365

 Score =  270 bits (691), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 144/318 (45%), Positives = 208/318 (65%), Gaps = 13/318 (4%)

Query: 19  EDSISAKHELWMAQ---SARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEF 75
           E+S+   +E W +    S R     AE+  RF +FK+N R++ + N+  +  ++L+LN+F
Sbjct: 34  EESLRGLYERWRSHYTVSRRGLGADAEE-RRFNVFKQNARYVHEGNKR-DMPFRLALNKF 91

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
           AD+T +EF  ++ G ++  R+  + S     +          LP ++DWR +GAVT +K+
Sbjct: 92  ADMTTDEFRRTYAGSRV--RHHLSLSGGRRGDGGFRYGDADNLPPAVDWRQKGAVTAIKD 149

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYIIR 193
           QG CG CW FS + AVEGI KIRTG+L+SLSEQ+++DC    ++GC GG MD AF +I +
Sbjct: 150 QGQCGSCWAFSTIVAVEGINKIRTGKLVSLSEQELMDCDNVNNQGCDGGLMDYAFQFIQK 209

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDA 252
           + G+T E  YPYQ  +G C+  +   +A  I  Y+DVP + E AL+ AV+ QPVSVAIDA
Sbjct: 210 N-GITTESNYPYQGEQGSCDQAKENAQAVTIDGYEDVPANDESALQKAVAGQPVSVAIDA 268

Query: 253 SSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRR 311
           S   F++YS GVF G C  +L+H V  VGYG++ +G  YW++KNSWG++WGE G+IRM+R
Sbjct: 269 SGQDFQFYSEGVFTGECSTDLDHGVAAVGYGATRDGTKYWIVKNSWGEDWGEKGYIRMQR 328

Query: 312 DVGGA-GLCGIARKASYP 328
            V    GLCGIA +ASYP
Sbjct: 329 GVSQTEGLCGIAMQASYP 346


>gi|357130486|ref|XP_003566879.1| PREDICTED: fruit bromelain-like [Brachypodium distachyon]
          Length = 354

 Score =  270 bits (690), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 147/321 (45%), Positives = 197/321 (61%), Gaps = 14/321 (4%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTD 80
           +++++HE WMA+  R YK+  EKA R ++F  N R ++  NR GN+TY L LN F+DLTD
Sbjct: 33  TVASRHERWMARFGRAYKDADEKARRQEVFGANARHVDAVNRSGNRTYTLGLNHFSDLTD 92

Query: 81  EEFIASHTGYKM----PTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQ 136
            EF+  H GY+     P   +  + Q  +       D  + +P S+DWRA+GAVT +KNQ
Sbjct: 93  HEFLQQHLGYRHHQPGPGGLLRPEDQDMSKA-TALADYGQDVPDSVDWRAQGAVTEIKNQ 151

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-GSRGCYGGWMDDAFSYIIRSQ 195
            SCG CW F+AVAA EG+ KI TG LIS+SEQQVLDC+ G   C GG ++ A  Y+  S 
Sbjct: 152 RSCGSCWAFAAVAATEGLVKIATGNLISMSEQQVLDCTGGGNTCDGGDINAALRYVAASG 211

Query: 196 GLTDERVYPYQRREGYCNWQRGAMKAARIRS--YQDVPTSELALRYAVSRQPVSVAIDAS 253
           GL  E  Y Y  ++G C     A  AA +    +  +   E ALR   + QPV+VA++AS
Sbjct: 212 GLQPEAAYAYAAQKGACRGASPANSAASVGGARFARLGGDEGALRGLAAGQPVAVALEAS 271

Query: 254 SPGFRYYSGGVFAG--PCGNNLNHAVTIVGYGSSNEG--PYWLIKNSWGQNWGEGGFIRM 309
            P FR+Y  GV+AG   CG  LNH VT+VGYG+ ++    YW++KN WG  WGE G++R+
Sbjct: 272 EPDFRHYKSGVYAGSASCGRRLNHGVTVVGYGAEDDSGDEYWVVKNQWGTLWGEKGYMRV 331

Query: 310 RR-DVGGAGLCGIARKASYPI 329
            R DV GA  CGIA  A YP 
Sbjct: 332 ARGDVAGAN-CGIASYAYYPT 351


>gi|357126406|ref|XP_003564878.1| PREDICTED: cysteine proteinase EP-B 1-like [Brachypodium
           distachyon]
          Length = 377

 Score =  270 bits (690), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 147/317 (46%), Positives = 190/317 (59%), Gaps = 22/317 (6%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQT--------YKLSLNEFADLTD 80
           W +      ++ AEK  RF  FK N  FI   N   N T        Y+L LN F D+  
Sbjct: 45  WQSAHRLPPQHHAEKHRRFGTFKSNVLFIHAHNTRLNDTSTNNNGPSYRLRLNRFGDMDQ 104

Query: 81  EEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCG 140
            EF ++  G   P    +  +QS     F Y D+ + +P+++DWR +GAVT VK+QG CG
Sbjct: 105 AEFRSTFAG---PLHRHTRPAQSIPG--FIY-DTVKDIPQAVDWRQKGAVTGVKDQGKCG 158

Query: 141 CCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQ-G 196
            CW FSAVA+VEG+  IRTG L+SLSEQ+++DC       GC GG M+ AF +I  S  G
Sbjct: 159 SCWAFSAVASVEGLNAIRTGSLVSLSEQELIDCDTGGDDNGCQGGLMESAFEFIAHSAGG 218

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSP 255
           L  E  YPY    G CN  RG+  + RI  +Q VP  +E AL  AV+ QPVSVAIDA   
Sbjct: 219 LATEAAYPYHASNGTCNANRGSSVSVRIDGHQSVPAGNEEALAKAVAHQPVSVAIDAGGQ 278

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG--PYWLIKNSWGQNWGEGGFIRMRRDV 313
            F++YS GVF G CG+ L+H V +VGYG + E    YW++KNSWG  WGE G++RM+RD 
Sbjct: 279 AFQFYSEGVFTGDCGSELDHGVAVVGYGVAEEDGKEYWIVKNSWGPGWGEHGYVRMQRDS 338

Query: 314 G-GAGLCGIARKASYPI 329
           G   GLCGIA +ASYP+
Sbjct: 339 GVDGGLCGIAMEASYPV 355


>gi|218181|dbj|BAA14402.1| oryzain alpha precursor [Oryza sativa Japonica Group]
          Length = 458

 Score =  270 bits (690), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 138/310 (44%), Positives = 192/310 (61%), Gaps = 17/310 (5%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEFADLTDEEFIA 85
           W A+  ++Y    E+  R+  F+ N R+I++ N     G  +++L LN FADLT+EE+  
Sbjct: 43  WKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRD 102

Query: 86  SHTGYKMPTRNISNQSQSY--ANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCW 143
           ++ G +   R     S  Y  A+N          LP S+DWR +GAV  +K+QG CG CW
Sbjct: 103 TYLGLRNKPRRERKVSDRYLAADN--------EALPESVDWRTKGAVAEIKDQGGCGSCW 154

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDER 201
            FSA+AAVE I +I TG LISLSEQ+++DC  S   GC GG MD AF +II + G+  E 
Sbjct: 155 AFSAIAAVEDINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGGIDTED 214

Query: 202 VYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGFRYY 260
            YPY+ ++  C+  R   K   I SY+DV P SE +L+ AV  QPVSVAI+A    F+ Y
Sbjct: 215 DYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVRNQPVSVAIEAGGRAFQLY 274

Query: 261 SGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV-GGAGLC 319
           S G+F G CG  L+H V  VGYG+ N   YW+++NSWG++WGE G++RM R++   +G C
Sbjct: 275 SSGIFTGKCGTALDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMERNIKASSGKC 334

Query: 320 GIARKASYPI 329
           GIA + SYP+
Sbjct: 335 GIAVEPSYPL 344


>gi|1345573|emb|CAA40073.1| endopeptidase (EP-C1) [Phaseolus vulgaris]
          Length = 361

 Score =  270 bits (689), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 145/342 (42%), Positives = 215/342 (62%), Gaps = 17/342 (4%)

Query: 2   LIIMVTWASLVM----SRTLHEDSISAKHELW-MAQSARTY----KNQAEKAMRFKIFKK 52
           L+ +V   SLV+    S   H+  ++++  LW + +  R++    ++  EK  RF +FK 
Sbjct: 5   LLWVVLSFSLVLGVANSFDFHDKDLASEESLWDLYERWRSHHTVSRSLGEKHKRFNVFKA 64

Query: 53  NFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYP 112
           N   +   N+  ++ YKL LN+FAD+T+ EF +++ G K+    +  +   + N  F Y 
Sbjct: 65  NLMHVHNTNKM-DKPYKLKLNKFADMTNHEFRSTYAGSKVNHHRMF-RGTPHENGAFMY- 121

Query: 113 DSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLD 172
           +    +P S+DWR +GAVT VK+QG CG CW FS V AVEGI +I+T +L++LSEQ+++D
Sbjct: 122 EKVVSVPPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVD 181

Query: 173 CSG--SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV 230
           C    ++GC GG M+ AF +I +  G+T E  YPY+ +EG C+  +    A  I  +++V
Sbjct: 182 CDKEENQGCNGGLMESAFEFIKQKGGITTESNYPYKAQEGTCDASKVNDLAVSIDGHENV 241

Query: 231 PTS-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP 289
           P + E AL  AV+ QPVSVAIDA    F++YS GVF G C  +LNH V IVGYG++ +G 
Sbjct: 242 PANDEDALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGDCSTDLNHGVAIVGYGTTVDGT 301

Query: 290 -YWLIKNSWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPI 329
            YW+++NSWG  WGE G+IRM+R++    GLCGIA   SYPI
Sbjct: 302 NYWIVRNSWGPEWGEHGYIRMQRNISKKEGLCGIAMLPSYPI 343


>gi|357129125|ref|XP_003566217.1| PREDICTED: thiol protease SEN102-like [Brachypodium distachyon]
          Length = 380

 Score =  270 bits (689), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 154/325 (47%), Positives = 207/325 (63%), Gaps = 19/325 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           E+S+ A +E W A+   + ++ AEK+ RF +F++N R + +FN   +  YKL LN FADL
Sbjct: 42  EESLWALYERWRARHTVS-RDLAEKSRRFNVFRENARLVHEFNLRRDAPYKLRLNRFADL 100

Query: 79  TDEEF--------IASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAV 130
           T +EF        ++ H  +K P    +N       + F +  +   LP S+DWR +GAV
Sbjct: 101 TSDEFRRSYASSRVSHHRMFK-PRAANNNDDDDDKGSSFTHGGA---LPTSVDWREKGAV 156

Query: 131 TPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAF 188
           T VK+QG CG CW FS +AAVEGI  IRT  L SLSEQQ++DC    + GC GG MDDAF
Sbjct: 157 TGVKDQGQCGSCWAFSTIAAVEGINAIRTNNLTSLSEQQLVDCDTKTNAGCDGGLMDDAF 216

Query: 189 SYIIRSQGLTDERVYPYQ-RREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPV 246
           SYI +  G+  E+ YPY+ R+   CN ++ A     I  Y+DVP   E AL+ AV+ QPV
Sbjct: 217 SYIAKHGGVAAEKSYPYRARQSSSCNSKKAAAAVVSIDGYEDVPRNDETALKKAVAAQPV 276

Query: 247 SVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGG 305
           +VAI+A    F++YS GVFAG CG  L+H V  VGYG + +G  YW++KNSWG+ WGE G
Sbjct: 277 AVAIEAGGSHFQFYSEGVFAGKCGTELDHGVAAVGYGVTVDGTKYWIVKNSWGEEWGEKG 336

Query: 306 FIRMRRDVGG-AGLCGIARKASYPI 329
           +IRM+RDV    GLCGIA +ASYP+
Sbjct: 337 YIRMKRDVADKEGLCGIAMEASYPV 361


>gi|26452046|dbj|BAC43113.1| putative cysteine proteinase RD21A precursor [Arabidopsis thaliana]
          Length = 362

 Score =  269 bits (688), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 138/318 (43%), Positives = 200/318 (62%), Gaps = 13/318 (4%)

Query: 18  HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFAD 77
           +E  +   +E W+ ++ + Y    EK  RFKIFK N +F+++ N   ++T+++ L  FAD
Sbjct: 36  NETEVRLMYEQWLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFAD 95

Query: 78  LTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQG 137
           LT+EEF A +   KM     S +++ Y      Y +    LP  +DWRA GAV  VK+QG
Sbjct: 96  LTNEEFRAIYLRKKMERNKDSVKTERYL-----YKEGDV-LPDEVDWRANGAVVSVKDQG 149

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYGGWMDDAFSYIIRS 194
           +CG CW FSAV AVEGI +I TG LISLSEQ+++DC     + GC GG M+ AF +I+++
Sbjct: 150 NCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDRGFVNAGCDGGIMNYAFEFIMKN 209

Query: 195 QGLTDERVYPYQRRE-GYCNWQRGA-MKAARIRSYQDVP-TSELALRYAVSRQPVSVAID 251
            G+  ++ YPY   + G CN  +    +   I  Y+DVP   E +L+ AV+ QPVSVAI+
Sbjct: 210 GGIETDQDYPYNANDLGLCNADKNNNTRVVTIDGYEDVPRDDEKSLKKAVAHQPVSVAIE 269

Query: 252 ASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRR 311
           ASS  F+ Y  GV  G CG +L+H V +VGYGS++   YW+I+NSWG NWG+ G+++++R
Sbjct: 270 ASSQAFQLYKSGVMTGTCGISLDHGVVVVGYGSTSGEDYWIIRNSWGLNWGDSGYVKLQR 329

Query: 312 DVGGA-GLCGIARKASYP 328
           ++    G CGIA   SYP
Sbjct: 330 NIDDPFGKCGIAMMPSYP 347


>gi|357143305|ref|XP_003572875.1| PREDICTED: xylem cysteine proteinase 1-like [Brachypodium
           distachyon]
          Length = 473

 Score =  269 bits (688), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 143/308 (46%), Positives = 195/308 (63%), Gaps = 19/308 (6%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           W  + ++ Y +  EK  R+++FK+N + I + NR  N +Y L LN+FAD+  EEF +++ 
Sbjct: 51  WSVKHSKIYVSPEEKVKRYEVFKQNLKHIVETNRR-NGSYWLGLNQFADVAHEEFKSTYL 109

Query: 89  GYKM----PTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWI 144
           G K     P R         A   F Y +S   LP S+DWR +GAVTPVKNQG CG CW 
Sbjct: 110 GLKTGMDGPAR---------APTAFRYENSVN-LPWSVDWRKKGAVTPVKNQGECGSCWA 159

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERV 202
           FS VAAVEGI +I TG+L SLSEQ+++DC  +   GC GG+MD AF+YI+ + G+  +  
Sbjct: 160 FSTVAAVEGINQIATGKLESLSEQELMDCDTTFDHGCGGGFMDFAFAYIMGNLGIHTDDD 219

Query: 203 YPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYS 261
           YPY   EGYC  ++   K   I  Y+DVP  SE++L  A++ QP+SV I A S  F++Y 
Sbjct: 220 YPYLMEEGYCKEKQPQSKVVTISGYEDVPENSEVSLLKALAHQPISVGIAAGSKDFQFYK 279

Query: 262 GGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCG 320
            GVF G CG  L+HA+T VGYGSS+   Y ++KNSWG++WGE G+ R++R  G   G+C 
Sbjct: 280 RGVFEGSCGTELDHALTAVGYGSSDGQDYIIMKNSWGKSWGEQGYFRIKRGTGKPEGVCS 339

Query: 321 IARKASYP 328
           I   ASYP
Sbjct: 340 IYSMASYP 347


>gi|4100157|gb|AAD10337.1| cysteine proteinase precursor [Hordeum vulgare]
          Length = 365

 Score =  269 bits (688), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 141/317 (44%), Positives = 206/317 (64%), Gaps = 11/317 (3%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKA--MRFKIFKKNFRFIEKFNREGNQTYKLSLNEFA 76
           E+S+   +E W +    + +     A   RF +FK+N R++ + N+  +  ++L+LN+FA
Sbjct: 34  EESLRGLYERWRSHYTVSRRGLGADAGERRFNVFKQNARYVHEGNKR-DMPFRLALNKFA 92

Query: 77  DLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQ 136
           D+T +EF  ++ G ++  R+  + S     +          LP ++DWR +GAVT +K+Q
Sbjct: 93  DMTTDEFRRTYAGSRV--RHHLSLSGGRRGDGGFRYGDADNLPPAVDWRQKGAVTAIKDQ 150

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYIIRS 194
           G CG CW FS + AVEGI KIRTG+L+SLSEQ+++DC    ++GC GG MD AF +I ++
Sbjct: 151 GQCGSCWAFSTIVAVEGINKIRTGKLVSLSEQELMDCDNVNNQGCDGGLMDYAFQFIQKN 210

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDAS 253
            G+T E  YPYQ  +G C+  +   +A  I  Y+DVP + E AL+ AV+ QPVSVAIDAS
Sbjct: 211 -GITTESNYPYQGEQGSCDQAKENAQAVTIDGYEDVPANDESALQKAVAGQPVSVAIDAS 269

Query: 254 SPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRD 312
              F++YS GVF G C  +L+H V  VGYG++ +G  YW++KNSWG++WGE G+IRM+R 
Sbjct: 270 GQDFQFYSEGVFTGECSTDLDHGVAAVGYGATRDGTKYWIVKNSWGEDWGEKGYIRMQRG 329

Query: 313 VGGA-GLCGIARKASYP 328
           V    GLCGIA +ASYP
Sbjct: 330 VSQTEGLCGIAMQASYP 346


>gi|1514953|dbj|BAA11170.1| cysteine proteinase [Oryza sativa (japonica cultivar-group)]
          Length = 368

 Score =  269 bits (688), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 146/298 (48%), Positives = 188/298 (63%), Gaps = 11/298 (3%)

Query: 38  KNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNI 97
           ++  EK  RF  FK N R+I + N+         LN F D+  EEF A+  G      N 
Sbjct: 57  RHHGEKHRRFGAFKDNVRYIHEHNKRAPGY--APLNRFGDMGREEFRATFAGSHA---ND 111

Query: 98  SNQSQSYANNWFGYP-DSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITK 156
             +    A    G+  +  R LPR++DWR +GAVT VK+QG CG CW FS V +VEGI  
Sbjct: 112 LRRDGLAAPPLPGFMYEGVRDLPRAVDWRRKGAVTGVKDQGKCGSCWAFSTVVSVEGINA 171

Query: 157 IRTGRLISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNW 214
           IRTGRL+SLSEQ+++DC  + + GC GG M++AF YI  S G+T E  YPY+   G C+ 
Sbjct: 172 IRTGRLVSLSEQELIDCDTADNSGCQGGLMENAFEYIKHSGGITTESAYPYRAANGTCDA 231

Query: 215 QRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNL 273
            R       I  +Q+VP  SE AL  AV+ QPVSVAIDA    F++YS GVFAG CG +L
Sbjct: 232 VRARGGLVVIDGHQNVPANSEAALAKAVANQPVSVAIDAGDQSFQFYSDGVFAGDCGTDL 291

Query: 274 NHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPI 329
           +H V +VGYG +N+G  YW++KNSWG  WGEGG+IRM+RD G   GLCGIA +ASYP+
Sbjct: 292 DHGVAVVGYGETNDGTEYWIVKNSWGTAWGEGGYIRMQRDSGYDGGLCGIAMEASYPV 349


>gi|30685308|ref|NP_566634.2| putative cysteine proteinase [Arabidopsis thaliana]
 gi|30315949|sp|Q9LT77.1|CPR1_ARATH RecName: Full=Probable cysteine proteinase At3g19400; Flags:
           Precursor
 gi|11994462|dbj|BAB02464.1| cysteine proteinase [Arabidopsis thaliana]
 gi|332642715|gb|AEE76236.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 362

 Score =  269 bits (688), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 138/318 (43%), Positives = 200/318 (62%), Gaps = 13/318 (4%)

Query: 18  HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFAD 77
           +E  +   +E W+ ++ + Y    EK  RFKIFK N +F+++ N   ++T+++ L  FAD
Sbjct: 36  NETEVRLMYEQWLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFAD 95

Query: 78  LTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQG 137
           LT+EEF A +   KM     S +++ Y      Y +    LP  +DWRA GAV  VK+QG
Sbjct: 96  LTNEEFRAIYLRKKMERTKDSVKTERYL-----YKEGDV-LPDEVDWRANGAVVSVKDQG 149

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYGGWMDDAFSYIIRS 194
           +CG CW FSAV AVEGI +I TG LISLSEQ+++DC     + GC GG M+ AF +I+++
Sbjct: 150 NCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDRGFVNAGCDGGIMNYAFEFIMKN 209

Query: 195 QGLTDERVYPYQRRE-GYCNWQRGA-MKAARIRSYQDVP-TSELALRYAVSRQPVSVAID 251
            G+  ++ YPY   + G CN  +    +   I  Y+DVP   E +L+ AV+ QPVSVAI+
Sbjct: 210 GGIETDQDYPYNANDLGLCNADKNNNTRVVTIDGYEDVPRDDEKSLKKAVAHQPVSVAIE 269

Query: 252 ASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRR 311
           ASS  F+ Y  GV  G CG +L+H V +VGYGS++   YW+I+NSWG NWG+ G+++++R
Sbjct: 270 ASSQAFQLYKSGVMTGTCGISLDHGVVVVGYGSTSGEDYWIIRNSWGLNWGDSGYVKLQR 329

Query: 312 DVGGA-GLCGIARKASYP 328
           ++    G CGIA   SYP
Sbjct: 330 NIDDPFGKCGIAMMPSYP 347


>gi|255635584|gb|ACU18142.1| unknown [Glycine max]
          Length = 345

 Score =  269 bits (688), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 144/313 (46%), Positives = 196/313 (62%), Gaps = 11/313 (3%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +    E WM++  + Y++  EK +RF+IFK N + I++ N+  +  Y L LNEFADL+
Sbjct: 41  DKLIELFESWMSKHGKIYQSIEEKLLRFEIFKDNLKHIDERNKVVS-NYWLGLNEFADLS 99

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
            +EF   + G K+   + S + +S     F Y D    LP+S+DWR +GAV PVKNQGSC
Sbjct: 100 HQEFKNKYLGLKV---DYSRRRESPEE--FTYKDVE--LPKSVDWRKKGAVAPVKNQGSC 152

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIRSQGL 197
           G CW FS VAAVEGI +I TG L SLSEQ+++DC  + S GC GG MD AFS+I+ + GL
Sbjct: 153 GSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDRTYSNGCNGGLMDYAFSFIVENGGL 212

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPG 256
             E  YPY   EG C   +   +   I  Y DVP  +E +L  A++ Q +SVAI+AS   
Sbjct: 213 HKEEDYPYIMEEGTCEMTKEETEVVTISGYHDVPQNNEQSLLKALANQSLSVAIEASGRD 272

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA 316
           F++YSGGVF G CG++L+H V  VGYG++    Y ++KNSWG  WGE G+IRMR  +   
Sbjct: 273 FQFYSGGVFDGHCGSDLDHGVAAVGYGTAKGVDYIIVKNSWGSKWGEKGYIRMRGTLETR 332

Query: 317 GLCGIARKASYPI 329
           G     + ASYP+
Sbjct: 333 GNLRYLQMASYPL 345


>gi|1174171|gb|AAB41816.1| NTH1 [Pisum sativum]
          Length = 367

 Score =  269 bits (687), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 145/335 (43%), Positives = 204/335 (60%), Gaps = 14/335 (4%)

Query: 1   MLIIMVTWA-SLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           +L  ++T + SL MS       +   +E W+ +  + Y    EK  RF+IFK N  FI++
Sbjct: 9   ILFGLITLSLSLDMSSGRSNKEVMTMYEKWLVKHQKVYYGLGEKNQRFQIFKDNLIFIDE 68

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG-L 118
            N   N +Y++ LNEF+D+T++E+  ++   +    NI N+  S     + Y       L
Sbjct: 69  HNAP-NHSYRVGLNEFSDITNKEYRDTYLS-RWSNNNIKNKITSVR---YAYKAGHNNKL 123

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGS 176
           P S+DWR  GA+TP+KNQGSCG CW FSAVAAVE I KI TG L+SLSEQ+++DC  + +
Sbjct: 124 PVSVDWR--GALTPIKNQGSCGACWAFSAVAAVEAINKIVTGSLVSLSEQELVDCDRTKN 181

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSEL 235
           +GC GG   +A+ +I+ + GL  +  YPY  R+  CN  +   K   I  Y++V   SE 
Sbjct: 182 KGCNGGNQVNAYRFIVENGGLDSQIDYPYLGRQSTCNQAKKNTKVVSINGYKNVQRNSES 241

Query: 236 ALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKN 295
           AL  AV+ QPVSV I+A    F+ Y  GVF G CG +L+HAV +VGYGS N   YWL+KN
Sbjct: 242 ALMEAVANQPVSVGIEAYGKDFQLYQSGVFTGSCGTSLDHAVVVVGYGSENGKDYWLVKN 301

Query: 296 SWGQNWGEGGFIRMRRDV--GGAGLCGIARKASYP 328
           SWG NWGE G++++ R++     G CGIA  A+YP
Sbjct: 302 SWGTNWGERGYLKIERNLKNTNTGKCGIAMDATYP 336


>gi|4426617|gb|AAD20453.1| cysteine endopeptidase precursor [Oryza sativa]
          Length = 368

 Score =  269 bits (687), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 148/310 (47%), Positives = 192/310 (61%), Gaps = 12/310 (3%)

Query: 26  HELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIA 85
           +E W  +     ++  EK  RF  FK N R+I + N+         LN F D+  EEF A
Sbjct: 46  YERWQ-EHHHVPRHHGEKHRRFGAFKDNVRYIHEHNKRAPGY--PPLNRFGDMGREEFRA 102

Query: 86  SHTGYKMPTRNISNQSQSYANNWFGYP-DSRRGLPRSIDWRARGAVTPVKNQGSCGCCWI 144
           +  G      N   +    A    G+  +  R LPR++DWR +GAVT VK+QG CG CW 
Sbjct: 103 TFAGSHA---NDLRRDGLAAPPLPGFMYEGVRDLPRAVDWRRKGAVTGVKDQGKCGSCWA 159

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIRSQGLTDERV 202
           FS V +VEGI  IRTGRL+SLSEQ+++DC  + + GC GG M++AF YI  S G+T E  
Sbjct: 160 FSTVVSVEGINAIRTGRLVSLSEQELIDCDTADNSGCQGGLMENAFEYIKHSGGITTESA 219

Query: 203 YPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYS 261
           YPY+   G C+  R       I  +Q+VP  SE AL  AV+ QPVSVAIDA    F++YS
Sbjct: 220 YPYRAANGTCDAVRARGGLVVIDGHQNVPANSEAALAKAVANQPVSVAIDAGDQSFQFYS 279

Query: 262 GGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVG-GAGLC 319
            GVFAG CG +L+H V +VGYG +N+G  YW++KNSWG  WGEGG+IRM+RD G   GLC
Sbjct: 280 DGVFAGDCGTDLDHGVAVVGYGETNDGTEYWIVKNSWGTAWGEGGYIRMQRDSGYDGGLC 339

Query: 320 GIARKASYPI 329
           GIA +ASYP+
Sbjct: 340 GIAMEASYPV 349


>gi|195637152|gb|ACG38044.1| vignain precursor [Zea mays]
          Length = 377

 Score =  269 bits (687), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 142/290 (48%), Positives = 186/290 (64%), Gaps = 11/290 (3%)

Query: 47  FKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNI--SNQSQSY 104
           F +FK N R I +FNR  ++ YKL LN F D+T +EF   + G ++    +   ++  S 
Sbjct: 70  FNVFKANVRLIHEFNRR-DEPYKLRLNRFGDMTADEFRRHYAGSRVAHHRMFRGDRQGSS 128

Query: 105 ANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLIS 164
           A+  F Y D+R  +P S+DWR +GAVT VK+QG CG CW FS +AAVEGI  I+T  L S
Sbjct: 129 ASASFMYADAR-DVPASVDWRQKGAVTDVKDQGQCGSCWAFSTIAAVEGINAIKTKNLTS 187

Query: 165 LSEQQVLDCS--GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAA 222
           LSEQQ++DC    + GC GG MD AF YI +  G+  E  YPY+ R+  C  ++      
Sbjct: 188 LSEQQLVDCDTKANAGCNGGLMDYAFQYIAKHGGVAAEDAYPYRARQASC--KKSPAPVV 245

Query: 223 RIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVG 281
            I  Y+DVP + E AL+ AV+ QPVSVAI+AS   F++YS GVF+G CG  L+H V  VG
Sbjct: 246 TIDGYEDVPANDESALKKAVAHQPVSVAIEASGSHFQFYSEGVFSGRCGTELDHGVAAVG 305

Query: 282 YGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPI 329
           YG + +G  YWL+KNSWG  WGE G+IRM RDV    G CGIA +ASYP+
Sbjct: 306 YGVTADGTKYWLVKNSWGPEWGEKGYIRMARDVAAKEGHCGIAMEASYPV 355


>gi|544129|sp|P25803.2|CYSEP_PHAVU RecName: Full=Vignain; AltName: Full=Bean endopeptidase; AltName:
           Full=Cysteine proteinase EP-C1; Flags: Precursor
 gi|20994|emb|CAA44816.1| endopeptidase [Phaseolus vulgaris]
          Length = 362

 Score =  268 bits (686), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 145/342 (42%), Positives = 215/342 (62%), Gaps = 17/342 (4%)

Query: 2   LIIMVTWASLVM----SRTLHEDSISAKHELW-MAQSARTY----KNQAEKAMRFKIFKK 52
           L+ +V   SLV+    S   H+  ++++  LW + +  R++    ++  EK  RF +FK 
Sbjct: 6   LLWVVLSFSLVLGVANSFDFHDKDLASEESLWDLYERWRSHHTVSRSLGEKHKRFNVFKA 65

Query: 53  NFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYP 112
           N   +   N+  ++ YKL LN+FAD+T+ EF +++ G K+    +  +   + N  F Y 
Sbjct: 66  NLMHVHNTNKM-DKPYKLKLNKFADMTNHEFRSTYAGSKVNHPRMF-RGTPHENGAFMY- 122

Query: 113 DSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLD 172
           +    +P S+DWR +GAVT VK+QG CG CW FS V AVEGI +I+T +L++LSEQ+++D
Sbjct: 123 EKVVSVPPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVD 182

Query: 173 CSG--SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV 230
           C    ++GC GG M+ AF +I +  G+T E  YPY+ +EG C+  +    A  I  +++V
Sbjct: 183 CDKEENQGCNGGLMESAFEFIKQKGGITTESNYPYKAQEGTCDASKVNDLAVSIDGHENV 242

Query: 231 PTS-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP 289
           P + E AL  AV+ QPVSVAIDA    F++YS GVF G C  +LNH V IVGYG++ +G 
Sbjct: 243 PANDEDALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGDCSTDLNHGVAIVGYGTTVDGT 302

Query: 290 -YWLIKNSWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPI 329
            YW+++NSWG  WGE G+IRM+R++    GLCGIA   SYPI
Sbjct: 303 NYWIVRNSWGPEWGEHGYIRMQRNISKKEGLCGIAMLPSYPI 344


>gi|168058022|ref|XP_001781010.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667567|gb|EDQ54194.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 457

 Score =  268 bits (685), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 144/314 (45%), Positives = 199/314 (63%), Gaps = 10/314 (3%)

Query: 22  ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDE 81
           ++ +   W  +  + Y    E+A RF ++K N  +I++ + E N +Y L L +FADLT+E
Sbjct: 41  LAGQFAAWAHKHGKVYSAAEERAHRFLVWKDNLEYIQR-HSEKNLSYWLGLTKFADLTNE 99

Query: 82  EFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGC 141
           EF   +TG ++  R+   +    A   F Y +S    P+SIDWR +GAVT VK+QGSCG 
Sbjct: 100 EFRRQYTGTRID-RSRRLKKGRNATGSFRYANSE--APKSIDWREKGAVTSVKDQGSCGS 156

Query: 142 CWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSYIIRSQGLTD 199
           CW FSAV +VEGI  IRTG  ISLS Q+++DC    ++GC GG MD AF ++I++ G+  
Sbjct: 157 CWAFSAVGSVEGINAIRTGDAISLSVQELVDCDKKYNQGCNGGLMDYAFDFVIQNGGIDT 216

Query: 200 ERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFR 258
           E+ YPYQ  +G C+  +   +   I SY+DVP   E AL+ AV+ QPVSVAI+A    F+
Sbjct: 217 EKDYPYQGYDGRCDVNKMNARVVTIDSYEDVPENDEEALKKAVAGQPVSVAIEAGGRDFQ 276

Query: 259 YYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRR---DVGG 315
            YSGGVF G CG +L+H V  VGYGS     YW++KNSWG+ WGE G++RM+R   D  G
Sbjct: 277 LYSGGVFTGRCGTDLDHGVLAVGYGSEKGLDYWIVKNSWGEYWGESGYLRMQRNLKDDNG 336

Query: 316 AGLCGIARKASYPI 329
            GLCGI  + SY +
Sbjct: 337 YGLCGINIEPSYAV 350


>gi|944916|gb|AAA74430.1| cysteine proteinase [Mesembryanthemum crystallinum]
          Length = 367

 Score =  268 bits (684), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 151/320 (47%), Positives = 201/320 (62%), Gaps = 23/320 (7%)

Query: 19  EDSISAKHELWMA--QSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFA 76
           ++++   +E W +   SAR++    EK  RF +FK+N ++I + N+  ++ YKL LN+F 
Sbjct: 37  DETLWDLYERWRSVYTSARSF---GEKQNRFHVFKENVKYINEVNKM-DKPYKLRLNQFG 92

Query: 77  DLTDEEFIASHTGYKM--PTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVK 134
           DLT  EF  ++   K+   TRN S           G+      +PRSIDWR +GAVTPVK
Sbjct: 93  DLTPSEFARTYANSKIIEGTRNESG----------GFMYENVEVPRSIDWRVKGAVTPVK 142

Query: 135 NQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYIIR 193
           NQG CG CW FSA AAVEGI +I TG+LISLSEQQ++DC + + GC GG M  AF YI +
Sbjct: 143 NQGRCGGCWAFSAAAAVEGINQITTGQLISLSEQQLIDCDTQNSGCRGGTMGRAFEYIKQ 202

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDA- 252
             G+T E  YPY+ + G C           I  Y ++  SE A+   ++ QPVSVA+DA 
Sbjct: 203 RGGITSEANYPYKAQAGMCKNNLIQRPTVSIDGYYNIRRSEDAVLKILAHQPVSVAVDAT 262

Query: 253 --SSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRM 309
             SS  + +Y  GVF GPCG  LNH VT VGYG++N+G  YW+IKNSWG+ WGE G++RM
Sbjct: 263 TWSSLDWMFYFQGVFTGPCGTKLNHGVTAVGYGTTNDGYDYWIIKNSWGETWGERGYMRM 322

Query: 310 RRDVGGAGLCGIARKASYPI 329
            R V   GLCGIA +AS+PI
Sbjct: 323 LRGVSPYGLCGIAMQASFPI 342


>gi|225458143|ref|XP_002280937.1| PREDICTED: cysteine proteinase RD21a [Vitis vinifera]
 gi|302142569|emb|CBI19772.3| unnamed protein product [Vitis vinifera]
          Length = 436

 Score =  268 bits (684), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 143/330 (43%), Positives = 195/330 (59%), Gaps = 17/330 (5%)

Query: 8   WASLVMSRTLHED-----SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNR 62
           WA  ++   +H       S +   E W  Q  +TY ++ EKA R K+F++N  F+ + N 
Sbjct: 6   WAVSILILAVHSSVSEASSTADLFEAWCEQYGKTYSSEEEKASRLKVFEENHAFVTQHNS 65

Query: 63  EGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSI 122
             N +Y L+LN FADLT  EF AS  G+  P R  S +S        G P     +P ++
Sbjct: 66  MANASYTLALNAFADLTHHEFKASRLGFS-PGRAQSIRS-------VGTPVQELHVPPAV 117

Query: 123 DWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCY 180
           DWR  GAVT VK+QG+CG CW FS   A+EGI KI TG L+SLSEQ+++DC  S   GC 
Sbjct: 118 DWRKSGAVTGVKDQGNCGGCWSFSTTGAIEGINKIVTGSLVSLSEQELVDCDRSYNSGCE 177

Query: 181 GGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRY 239
           GG MD A+ ++I++QG+  E  YPY   +  CN ++       I  Y D+P   E  L  
Sbjct: 178 GGLMDYAYQFVIKNQGIDSEADYPYVGMDKPCNKEKLKKHIVTIDGYTDIPPNDEKQLLQ 237

Query: 240 AVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQ 299
            V++QPVSV I  S   F+ YS GV+ GPC + L+HAV IVGYG+ +   +W++KNSWG+
Sbjct: 238 VVAKQPVSVGICGSEKTFQLYSKGVYTGPCSSTLDHAVLIVGYGTEDGVDFWIVKNSWGE 297

Query: 300 NWGEGGFIRMRRDVGGA-GLCGIARKASYP 328
           +WG  G+I M R+ G A G+CGI   ASYP
Sbjct: 298 HWGMRGYIHMLRNNGTAEGICGINMLASYP 327


>gi|226509942|ref|NP_001146834.1| cysteine protease precursor [Zea mays]
 gi|159506725|gb|ABW97700.1| cysteine protease [Zea mays]
 gi|414867308|tpg|DAA45865.1| TPA: cysteine protease [Zea mays]
          Length = 352

 Score =  268 bits (684), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 143/305 (46%), Positives = 198/305 (64%), Gaps = 9/305 (2%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           W A   R+Y    E+  RF+++++N   IE  NR GN TY L  N+FADLT+EEF+  +T
Sbjct: 52  WQATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 111

Query: 89  GYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQG-SCGCCWIFSA 147
              MP R  + + ++  ++     D+    P S+DWR++GAVTP+KNQG SC  CW F  
Sbjct: 112 MKGMPVRRDAGKKRANVSSSAAAVDA----PTSVDWRSKGAVTPIKNQGPSCSSCWAFVT 167

Query: 148 VAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQ 206
            A +E ITKI TG+L+SLSEQ+++DC     GC  G+  + + ++I++ GLT E  YPYQ
Sbjct: 168 AATIESITKITTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGLTTEANYPYQ 227

Query: 207 RREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFA 266
            R   C+  R A  AA I  Y  +P  E  L+ AV++QPV+ AI+      ++YSGGVF+
Sbjct: 228 ARRYACSRSRAAQHAATISDYVQLPAGEGQLQQAVAQQPVAAAIEMGGS-LQFYSGGVFS 286

Query: 267 GPCGNNLNHAVTIVGYG--SSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARK 324
           G CG  +NHA+T+VGYG  SS+   YWL+KNSWGQ+WGE G++RMRRDVG  GLCGIA  
Sbjct: 287 GQCGTRMNHAITVVGYGADSSSGLKYWLVKNSWGQSWGERGYLRMRRDVGRGGLCGIALD 346

Query: 325 ASYPI 329
            +YP+
Sbjct: 347 LAYPV 351


>gi|357130490|ref|XP_003566881.1| PREDICTED: actinidain-like [Brachypodium distachyon]
          Length = 350

 Score =  267 bits (683), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 141/319 (44%), Positives = 195/319 (61%), Gaps = 13/319 (4%)

Query: 2   LIIMVTWASL--VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           L+++V  A    V ++     +++A+HE WMA+  R Y +  EKA R  +F  N R+++ 
Sbjct: 14  LLVLVATAVFHAVAAQGEAGLTVAARHEQWMAKFGRVYTDANEKARRQAVFGANARYVDA 73

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLP 119
            NR GN+TY L LNEF+DLTD EF  +H GY+      +N S+   +  +G   +   +P
Sbjct: 74  VNRAGNRTYTLGLNEFSDLTDNEFAKTHLGYREFRPETANISKG-VDPGYGLAGN---IP 129

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRG 178
           +S DWR +GAVT VK+QG CGCCW F+AVAA EG+ KI  G LIS+SEQQVLDC +G+  
Sbjct: 130 KSFDWRTKGAVTEVKSQGGCGCCWAFAAVAATEGLVKIAKGTLISMSEQQVLDCTTGNNT 189

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARI--RSYQDVPTSELA 236
           C GG+M+DA SY+  S GL  E  Y Y   +G C        A  +    Y  +  +E  
Sbjct: 190 CKGGYMNDALSYVFASGGLQTEEDYEYNAEKGACRRDVTPNPATSVGHAEYMPLDGNEFL 249

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAG--PCGNNLNHAVTIVGYGSSNEGP--YWL 292
           L+  V+RQPV VA++A    F+ Y GGVF G   CG NL+H  T+VGYG ++ G   YWL
Sbjct: 250 LQKLVARQPVVVAVEAYGTDFKNYGGGVFTGSPSCGQNLDHFFTVVGYGFADGGKQMYWL 309

Query: 293 IKNSWGQNWGEGGFIRMRR 311
           +KN WG +WGE G++R+ R
Sbjct: 310 VKNQWGTSWGESGYMRIAR 328


>gi|357114837|ref|XP_003559200.1| PREDICTED: fruit bromelain-like [Brachypodium distachyon]
          Length = 371

 Score =  267 bits (683), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 143/310 (46%), Positives = 189/310 (60%), Gaps = 11/310 (3%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           W A   RTY +  E+  RF++++ N  +IE  NR G  TY+L  N+FADLT EEF++ + 
Sbjct: 62  WQAAHNRTYGDAEERLRRFQVYRANIEYIEATNRRGGLTYELGENQFADLTSEEFLSMYA 121

Query: 89  GYKMPTRNISNQSQSYANNWFGYP-----DSRRGLPRSIDWRARGAVTPVKNQG-SCGCC 142
                     +++     +  G       D     P S DWRA+GAVTP KNQG +C  C
Sbjct: 122 SSYDAGDRADDEAALITTDVAGDGAWSDGDLEALPPPSWDWRAKGAVTPPKNQGPTCSSC 181

Query: 143 WIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQGLTDER 201
           W F  VA +EG+T I+TG+LISLSEQQ++DC     GC  G     F +++ + GLT E 
Sbjct: 182 WAFVTVATIEGLTFIKTGKLISLSEQQLVDCDMYDGGCNTGSYSRGFRWVLENGGLTTEA 241

Query: 202 VYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYY 260
            YPY    G CN  + A  AA+I     +P  +EL ++ AV+ QPV VAI+  S G ++Y
Sbjct: 242 EYPYTAARGPCNRAKSAHHAAKITGQGRIPPQNELVMQKAVAGQPVGVAIEVGS-GMQFY 300

Query: 261 SGGVFAGPCGNNLNHAVTIVGYG--SSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGL 318
             GV++GPCG NL HAVT+VGYG   ++   YW++KNSWGQ WGE GFIRMRRDVGG GL
Sbjct: 301 KTGVYSGPCGTNLAHAVTVVGYGVDPASGAKYWIVKNSWGQAWGERGFIRMRRDVGGPGL 360

Query: 319 CGIARKASYP 328
           CGIA   +YP
Sbjct: 361 CGIALDVAYP 370


>gi|413938554|gb|AFW73105.1| hypothetical protein ZEAMMB73_931917 [Zea mays]
          Length = 361

 Score =  267 bits (683), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 145/309 (46%), Positives = 196/309 (63%), Gaps = 10/309 (3%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           W  +  + Y +  EK  R++IFK+N   I + NR+ N +Y L LN+FAD+  EEF AS+ 
Sbjct: 47  WSVKHGKLYASPTEKLERYEIFKQNLMHIAETNRK-NGSYWLGLNQFADVAHEEFKASYL 105

Query: 89  GYKMPTRNISNQSQSYANNWFGYPDSRRG-LPRSIDWRARGAVTPVKNQGSCGCCWIFSA 147
           G K      +   Q+     F Y  +  G LP S+DWR +GAVTPVKNQG CG CW FS+
Sbjct: 106 GLKRALPR-AGAPQTRTPTAFRYAAAAAGSLPWSVDWRYKGAVTPVKNQGKCGSCWAFSS 164

Query: 148 VAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERVYPY 205
           VAAVEGI +I TG+L+SLSEQ+++DC  +   GC GG MD AF+Y++ SQG+  E  YPY
Sbjct: 165 VAAVEGINQIVTGKLVSLSEQELVDCDTTLDHGCEGGTMDLAFAYMMGSQGIHAEDDYPY 224

Query: 206 QRREGYCNWQRG---AMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYS 261
              EGYC  ++     +    +  ++DVP  SE++L  A++ QPVSV I A S  F++Y 
Sbjct: 225 LMEEGYCKEKQPCVLGITEQDLTGFEDVPENSEISLLKALAHQPVSVGIAAGSRDFQFYR 284

Query: 262 GGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCG 320
           GGVF G C   L+HA+T VGYGSS    Y  +KNSWG+NWGE G++R++   G   G+CG
Sbjct: 285 GGVFDGACSVELDHALTAVGYGSSYGQNYITMKNSWGKNWGEQGYVRIKMGTGKPEGVCG 344

Query: 321 IARKASYPI 329
           I   ASYP+
Sbjct: 345 IYTMASYPV 353


>gi|57118007|gb|AAW34135.1| cysteine protease gp2b [Zingiber officinale]
          Length = 379

 Score =  267 bits (682), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 141/309 (45%), Positives = 193/309 (62%), Gaps = 15/309 (4%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEFADLTDEEFIA 85
           W A++    K       R ++FK+N +F++K N     G  T++L +N FADLT+EE+  
Sbjct: 54  WRAKNHPAEKYLDLNEYRLEVFKENLQFVDKHNAAADRGEHTFRLGMNRFADLTNEEYRT 113

Query: 86  SHTGYKMPTRNISNQSQSYANNWFGYPDSRRG--LPRSIDWRARGAVTPVKNQGSCGCCW 143
                    R+ S   +S +         R G  LP SIDWR +GAV PVKNQG CG CW
Sbjct: 114 RFL------RDFSRLRRSASGKISSRYRLREGDDLPDSIDWREKGAVVPVKNQGGCGSCW 167

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDCS-GSRGCYGGWMDDAFSYIIRSQGLTDERV 202
            FS VAAVEGI +I TG LISLSEQQ++DC+  + GC GGWM+ AF +I+ + G+  E  
Sbjct: 168 AFSTVAAVEGINQIVTGDLISLSEQQLVDCTTANHGCRGGWMNPAFQFIVNNGGINSEET 227

Query: 203 YPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYS 261
           YPY+ + G CN    A     I SY++VP+ +E +L+ AV+ QPVSV +DA+   F+ Y 
Sbjct: 228 YPYRGQNGICNSTVNA-PVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYR 286

Query: 262 GGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCG 320
            G+F G C  + NHA+T+VGYG+ N+  Y  +KNSWG+NWGE G+IR+ R++G   G CG
Sbjct: 287 SGIFTGSCNISANHALTVVGYGTENDKDYRTVKNSWGKNWGESGYIRVERNIGNPNGKCG 346

Query: 321 IARKASYPI 329
           I R ASYP+
Sbjct: 347 ITRFASYPV 355


>gi|357124027|ref|XP_003563708.1| PREDICTED: germination-specific cysteine protease 1-like
           [Brachypodium distachyon]
          Length = 334

 Score =  267 bits (682), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 149/326 (45%), Positives = 201/326 (61%), Gaps = 18/326 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE----GNQTYKLSLNE 74
           + ++  ++E WMA+  RTYK+  EKA RF++FK N  FI+  N      G    KL+ N+
Sbjct: 13  DKAMRERYEKWMAEQGRTYKDSTEKARRFEVFKSNAHFIDSHNAATGPGGKSRPKLTTNK 72

Query: 75  FADLTDEEFIASH-TGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPV 133
           FADLT++EF   + TG+++  R  S  + +     FG   S   +P SIDWRARGAVT V
Sbjct: 73  FADLTEDEFRNIYVTGHRVNYRPTSLVTDTVFK--FGAV-SLSDVPPSIDWRARGAVTSV 129

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYI 191
           K+Q  C CCW FS+ AAVEGI +I TG  +SLS QQ++DCS   +  C  G +D A+ YI
Sbjct: 130 KDQHLCACCWAFSSAAAVEGIHQITTGNQVSLSVQQLVDCSNAANEKCKAGEIDKAYEYI 189

Query: 192 IRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAI 250
            RS GL  ++ YPY+   G C    G    ARI  +Q VP  +E AL  AV+ QPVSVA+
Sbjct: 190 ARSGGLVADQDYPYEGHSGTCR-VYGKQAVARISGFQYVPARNETALLLAVAHQPVSVAL 248

Query: 251 DASSPGFRYYSGGVFAG---PCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGF 306
           D  S   ++   G+F     PC  NLNHA+TIVGYG+   G  YWL+KNSWG +WG+ G+
Sbjct: 249 DGLSRALQHIGTGIFGSAGEPCTTNLNHAMTIVGYGTDEHGTRYWLMKNSWGSDWGDKGY 308

Query: 307 IRMRRDVGGA--GLCGIARKASYPIA 330
           ++  RDV     G+CG+A +ASYP+A
Sbjct: 309 VKFARDVASEINGVCGLALEASYPVA 334


>gi|81542|pir||S02728 actinidain (EC 3.4.22.14) precursor (clone pAC.1) - kiwi fruit
           (fragment)
 gi|15957|emb|CAA31435.1| actinidin precursor [Actinidia chinensis]
 gi|166319|gb|AAA32630.1| actinidin precursor [Actinidia deliciosa]
 gi|226542|prf||1601514A actinidin
          Length = 302

 Score =  266 bits (680), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 133/280 (47%), Positives = 184/280 (65%), Gaps = 11/280 (3%)

Query: 54  FRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD 113
            RFI++ N + N++YK+ LN+FADLT EEF +++ G+   + N +  S  Y       P 
Sbjct: 1   LRFIDEHNADTNRSYKVGLNQFADLTGEEFRSTYLGFTGGS-NKTKVSNRYE------PR 53

Query: 114 SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
             + LP  +DWR+ GAV  +K+QG CG CW FSA+A VEGI KI TG LISLSEQ+++ C
Sbjct: 54  VSQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIGC 113

Query: 174 SGS---RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV 230
            G+   RGC GG++ D F +II + G+     YPY  ++G CN      K   I +Y +V
Sbjct: 114 GGTQNTRGCNGGYITDGFQFIINNGGINTGENYPYTAQDGECNLDLQNEKYVTIDTYGNV 173

Query: 231 P-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP 289
           P  +E AL+ AV+ QPVSVA+DA+   F++YS G+F GPCG  ++HAVTIVGYG+     
Sbjct: 174 PYNNEWALQTAVTYQPVSVALDAAGDAFKHYSSGIFTGPCGTAIDHAVTIVGYGTEGGID 233

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           YW+++NSW   WGE G++R+ R+VGGAG CGIA   SYP+
Sbjct: 234 YWIVENSWDTTWGEEGYMRILRNVGGAGTCGIATMPSYPV 273


>gi|38345906|emb|CAE04498.2| OSJNBb0059K02.8 [Oryza sativa Japonica Group]
          Length = 458

 Score =  266 bits (680), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 137/310 (44%), Positives = 192/310 (61%), Gaps = 17/310 (5%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEFADLTDEEFIA 85
           W A+  ++Y    E+  R+  F+ N R+I++ N     G  +++L LN FADLT+EE+  
Sbjct: 43  WKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRD 102

Query: 86  SHTGYKMPTRNISNQSQSY--ANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCW 143
           ++ G +   R     S  Y  A+N          LP S+DWR +GAV  +K+Q   G CW
Sbjct: 103 TYLGLRNKPRRERKVSDRYLAADN--------EALPESVDWRTKGAVAEIKDQEVAGSCW 154

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDER 201
            FSA+AAVEGI +I TG LISLSEQ+++DC  S   GC GG MD AF +II + G+  E 
Sbjct: 155 AFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGGIDTED 214

Query: 202 VYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGFRYY 260
            YPY+ ++  C+  R   K   I SY+DV P SE +L+ AV+ QPVSVAI+A    F+ Y
Sbjct: 215 DYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQPVSVAIEAGGRAFQLY 274

Query: 261 SGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV-GGAGLC 319
           S G+F G CG  L+H V  VGYG+ N   YW+++NSWG++WGE G++RM R++   +G C
Sbjct: 275 SSGIFTGKCGTALDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMERNIKASSGKC 334

Query: 320 GIARKASYPI 329
           GIA + SYP+
Sbjct: 335 GIAVEPSYPL 344


>gi|297603535|ref|NP_001054211.2| Os04g0670200 [Oryza sativa Japonica Group]
 gi|109939735|sp|P25777.2|ORYB_ORYSJ RecName: Full=Oryzain beta chain; Flags: Precursor
 gi|32488398|emb|CAE02823.1| OSJNBa0043A12.28 [Oryza sativa Japonica Group]
 gi|90399163|emb|CAJ86092.1| H0818H01.14 [Oryza sativa Indica Group]
 gi|125550169|gb|EAY95991.1| hypothetical protein OsI_17862 [Oryza sativa Indica Group]
 gi|215766596|dbj|BAG98700.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255675868|dbj|BAF16125.2| Os04g0670200 [Oryza sativa Japonica Group]
          Length = 466

 Score =  266 bits (679), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 138/319 (43%), Positives = 196/319 (61%), Gaps = 16/319 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQ--AEKAMRFKIFKKNFRFIEKFNREGNQT--YKLSLNE 74
           E    A ++LW+A++     N    E   RF +F  N +F++  N   ++   ++L +N 
Sbjct: 45  EAEARAAYDLWLAENGGGSPNALGGEHERRFLVFWDNLKFVDAHNARADERGGFRLGMNR 104

Query: 75  FADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVK 134
           FADLT+EEF A+  G K+  R+ +   + Y +      D    LP S+DWR +GAV PVK
Sbjct: 105 FADLTNEEFRATFLGAKVAERSRA-AGERYRH------DGVEELPESVDWREKGAVAPVK 157

Query: 135 NQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---RGCYGGWMDDAFSYI 191
           NQG CG CW FSAV+ VE I ++ TG +I+LSEQ++++CS +    GC GG MDDAF +I
Sbjct: 158 NQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFI 217

Query: 192 IRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAI 250
           I++ G+  E  YPY+  +G C+  R   K   I  ++DVP   E +L+ AV+ QPVSVAI
Sbjct: 218 IKNGGIDTEDDYPYKAVDGKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAI 277

Query: 251 DASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMR 310
           +A    F+ Y  GVF+G CG +L+H V  VGYG+ N   YW+++NSWG  WGE G++RM 
Sbjct: 278 EAGGREFQLYHSGVFSGRCGTSLDHGVVAVGYGTDNGKDYWIVRNSWGPKWGESGYVRME 337

Query: 311 RDVG-GAGLCGIARKASYP 328
           R++    G CGIA  ASYP
Sbjct: 338 RNINVTTGKCGIAMMASYP 356


>gi|351721126|ref|NP_001237199.1| cysteine proteinase precursor [Glycine max]
 gi|31559530|dbj|BAC77523.1| cysteine proteinase [Glycine max]
 gi|31559532|dbj|BAC77524.1| cysteine proteinase [Glycine max]
          Length = 362

 Score =  266 bits (679), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 144/347 (41%), Positives = 207/347 (59%), Gaps = 21/347 (6%)

Query: 1   MLIIMVTWASLVMSRTL--------HEDSISAKHELW-MAQSARTY----KNQAEKAMRF 47
           M +    W  L +S  L        H+  + ++  LW + +  R++    ++  +K  RF
Sbjct: 1   MAMKKFLWVVLSLSLVLGVANSFDFHDKDLESEESLWDLYERWRSHHTVSRSLGDKHKRF 60

Query: 48  KIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANN 107
            +FK N   +   N+  ++ YKL LN+FAD+T+ EF +++ G K+    +  +     N 
Sbjct: 61  NVFKANMMHVHNTNKM-DKPYKLKLNKFADMTNHEFRSTYAGSKVNHHRMF-RDMPRGNG 118

Query: 108 WFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSE 167
            F Y +    +P S+DWR +GAVT VK+QG CG CW FS V AVEGI +I+T +L+SLSE
Sbjct: 119 TFMY-EKVGSVPASVDWRKKGAVTDVKDQGHCGSCWAFSTVVAVEGINQIKTNKLVSLSE 177

Query: 168 QQVLDCSGSR--GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIR 225
           Q+++DC      GC GG M+ AF +I +  G+T E  YPY  ++G C+  +    A  I 
Sbjct: 178 QELVDCDTEENAGCNGGLMESAFQFIKQKGGITTESYYPYTAQDGTCDASKANDLAVSID 237

Query: 226 SYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGS 284
            +++VP   E AL  AV+ QPVSVAIDA    F++YS GVF G C   LNH V IVGYG+
Sbjct: 238 GHENVPGNDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGDCSTELNHGVAIVGYGA 297

Query: 285 SNEGP-YWLIKNSWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPI 329
           + +G  YW+++NSWG  WGE G+IRM+R++    GLCGIA  ASYPI
Sbjct: 298 TVDGTSYWIVRNSWGPEWGELGYIRMQRNISKKEGLCGIAMLASYPI 344


>gi|356542171|ref|XP_003539543.1| PREDICTED: LOW QUALITY PROTEIN: KDEL-tailed cysteine endopeptidase
           CEP2-like [Glycine max]
          Length = 342

 Score =  266 bits (679), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 146/339 (43%), Positives = 203/339 (59%), Gaps = 23/339 (6%)

Query: 1   MLIIMVTWASLVMSRTLHEDSIS------AKHELWMAQSARTYKNQAEKAMRFKIFKKNF 54
           +L++   W +       H D+ S       ++E W+ +  + Y+N+ E   RF+I++ N 
Sbjct: 13  LLVLCNLWITASACPAKHNDNSSDSEVMRMRYESWLKKYGQKYRNKDEWEFRFEIYRANV 72

Query: 55  RFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDS 114
           +FIE +N + N +YKL  N+F DLT+EEF   +  Y         Q +S+    F Y   
Sbjct: 73  QFIEVYNSQ-NYSYKLMDNKFVDLTNEEFRRMYLVY---------QPRSHLQTRFMYQ-K 121

Query: 115 RRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC- 173
              LP+ IDWR RGAVT +K+QG CG CW FSAVA VE I KI+TG+L+SLSEQQ++DC 
Sbjct: 122 HGDLPKRIDWRTRGAVTXIKDQGHCGSCWSFSAVATVEDINKIKTGKLVSLSEQQLIDCD 181

Query: 174 --SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP 231
             +G+ GC GG M+  F++I +  GLT ++ YPYQ  +G  N  +    A  I  Y+++P
Sbjct: 182 NRNGNEGCNGGHME-TFTFITKRGGLTTDKNYPYQGSDGDXNKAKVRNHAVAICGYENLP 240

Query: 232 T-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPY 290
             +E  L+ AV+ QP SVA DA    F+ YS G F+G CG +LNH +TIVGYG  N   Y
Sbjct: 241 AHNENMLKAAVAHQPASVATDAGGYAFQLYSKGTFSGSCGKDLNHRMTIVGYGEENGEKY 300

Query: 291 WLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYP 328
           WL+KNSW  + G  G+IRM+RD     G CG A +ASYP
Sbjct: 301 WLVKNSWANDXGVSGYIRMKRDPKDKDGTCGTAMEASYP 339


>gi|194352762|emb|CAQ00109.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
 gi|326517250|dbj|BAJ99991.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 367

 Score =  266 bits (679), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 151/317 (47%), Positives = 202/317 (63%), Gaps = 10/317 (3%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           EDS+ A +E W  Q     ++  EKA RF +F++N R I +FNR G+  YKL LN F D+
Sbjct: 40  EDSLWALYERWREQHT-VARDLGEKARRFNVFRENVRLIHEFNR-GDAPYKLRLNRFGDM 97

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
           T +EF  ++   ++    + +  +       G   S R +P S+DWR +GAVT VK+QG 
Sbjct: 98  TADEFRRAYASSRVSHHRMFSLKEGGGGFMHGSAASVRDVPPSVDWRQKGAVTAVKDQGQ 157

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYIIRSQG 196
           CG CW FS +AAVEGI  IR+  L SLSEQQ++DC    + GC GG MD AF YI +  G
Sbjct: 158 CGSCWAFSTIAAVEGINAIRSKNLTSLSEQQLVDCDTKSNAGCNGGLMDYAFQYIAKHGG 217

Query: 197 LTDERVYPYQRREG-YCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASS 254
           +  E  YPY+ R+   CN +  A+    I  Y+DVP + E AL+ AV+ QPV+VAI+AS 
Sbjct: 218 VAAEDAYPYKARQASSCNKKPSAV--VTIDGYEDVPANDETALKKAVAAQPVAVAIEASG 275

Query: 255 PGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDV 313
             F++YS GVFAG CG  L+H V  VGYG++ +G  YW++KNSWG  WGE G+IRM+RDV
Sbjct: 276 SHFQFYSEGVFAGKCGTELDHGVAAVGYGTTVDGTKYWIVKNSWGPEWGEKGYIRMKRDV 335

Query: 314 -GGAGLCGIARKASYPI 329
               GLCGIA +ASYP+
Sbjct: 336 KDKEGLCGIAMEASYPV 352


>gi|359359168|gb|AEV41073.1| putative cysteine protease [Oryza minuta]
          Length = 499

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 148/332 (44%), Positives = 202/332 (60%), Gaps = 23/332 (6%)

Query: 12  VMSRTLHEDSISAKHELWMAQSARTYKNQ----AEKAMRFKIFKKNFRFIEKFNREGNQT 67
           V+ RT  E    A ++LW+A+      +      E   RF++F  N +F++  N   ++ 
Sbjct: 53  VVERT--EAEARAVYDLWVARHRHGGGSHNGLVGEYERRFRVFWDNLKFVDAHNARADEH 110

Query: 68  --YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWR 125
             ++L +N FADLT++EF A++ G   P     +  ++Y +      D    LP S+DWR
Sbjct: 111 GGFRLGMNRFADLTNDEFRAAYLG-TTPAGRGRHVGEAYRH------DGVEALPDSVDWR 163

Query: 126 ARGAVT-PVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYG 181
            +GAV  PVKNQG CG CW FSAVAAVEGI KI TG L+SLSEQ++++C+    + GC G
Sbjct: 164 DKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECARNGANSGCNG 223

Query: 182 GWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYA 240
           G MDDAF++I R+ GL  E  YPY   +G CN  + + K   I  ++DVP   EL+L+ A
Sbjct: 224 GMMDDAFAFIARNGGLDTEEDYPYTAMDGKCNLAKKSRKVVSIDGFEDVPENDELSLQKA 283

Query: 241 VSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGS--SNEGPYWLIKNSWG 298
           V+ QPVSVAIDA    F+ Y  GVF G CG +L+H V  VGYG+  +    YW ++NSWG
Sbjct: 284 VAHQPVSVAIDAGGREFQLYDSGVFTGRCGTSLDHGVVAVGYGTDAATGTDYWTVRNSWG 343

Query: 299 QNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
            +WGE G+IRM R+V    G CGIA  ASYPI
Sbjct: 344 PDWGENGYIRMERNVTARTGKCGIAMMASYPI 375


>gi|359359166|gb|AEV41071.1| putative oryzain beta chain precursor [Oryza minuta]
          Length = 464

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 141/316 (44%), Positives = 198/316 (62%), Gaps = 13/316 (4%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN-REGNQTYKLSLNEFAD 77
           E    A ++LW+A++ R+Y    E   RF++F  N RF +  N R  +  ++L +N FAD
Sbjct: 46  EAEARAAYDLWLAENGRSYNALGEHERRFRVFWDNLRFADAHNARADDHGFRLGMNRFAD 105

Query: 78  LTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQG 137
           LT+EEF A+  G K+  R+ +   + Y +      D    LP S+DWR +GAV PVKNQG
Sbjct: 106 LTNEEFRATFLGAKVVERSRA-AGERYRH------DGVEELPESVDWREKGAVAPVKNQG 158

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRS 194
            CG CW FSAV+ VE I ++ TG +I+LSEQ++++CS    + GC GG MDDAF +II++
Sbjct: 159 QCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNGGCNGGLMDDAFDFIIKN 218

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDAS 253
            G+  E  YPY+  +G C+  R   K   I  ++DVP   E +L+ AV+ QPVSVAI+A 
Sbjct: 219 GGIDTEDDYPYKAVDGKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAG 278

Query: 254 SPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV 313
              F+ Y  GVF+G CG +L+H V  VGYG+ N   YW+++NSWG  WGE G++RM R++
Sbjct: 279 GREFQLYHSGVFSGRCGTSLDHGVVAVGYGTDNGKDYWIVRNSWGPKWGESGYVRMERNI 338

Query: 314 G-GAGLCGIARKASYP 328
               G CGIA  ASYP
Sbjct: 339 NVTTGKCGIAMMASYP 354


>gi|359359120|gb|AEV41026.1| putative cysteine protease [Oryza minuta]
          Length = 464

 Score =  265 bits (677), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 148/332 (44%), Positives = 203/332 (61%), Gaps = 23/332 (6%)

Query: 12  VMSRTLHEDSISAKHELWMAQSARTYKNQ----AEKAMRFKIFKKNFRFIEKFNREGNQT 67
           V+ RT  E    A ++LW+A+      +      E   RF++F  N +F++  N   ++ 
Sbjct: 54  VVERT--EAEARAVYDLWVARHRHGGGSHNGFVGEYERRFRVFWDNLKFVDAHNAHADEH 111

Query: 68  --YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWR 125
             ++L +N FADLT++EF A++ G   P     +  + Y +      D    LP S+DWR
Sbjct: 112 GGFRLGMNRFADLTNDEFRAAYLG-TTPAGRGRHVGEMYRH------DGVEALPDSVDWR 164

Query: 126 ARGAV-TPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYG 181
            +GAV +PVKNQG CG CW FSAVAAVEGI KI TG L+SLSEQ++++C+   G+ GC G
Sbjct: 165 DKGAVVSPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECARNRGNSGCNG 224

Query: 182 GWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYA 240
           G MDDAF++I R+ GL  E  YPY   +G C+  + + K   I  ++DVP   EL+L+ A
Sbjct: 225 GIMDDAFAFITRNGGLDTEEDYPYTAMDGKCDLAKKSRKVVSIDGFEDVPENDELSLQKA 284

Query: 241 VSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGS--SNEGPYWLIKNSWG 298
           V+ QPVSVAIDA    F+ Y  GVF G CG +L+H V  VGYG+  +    YW ++NSWG
Sbjct: 285 VAHQPVSVAIDAGGREFQLYDSGVFTGRCGTSLDHGVVAVGYGTDAATGTDYWTVRNSWG 344

Query: 299 QNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
            +WGE G+IRM R+V    G CGIA  ASYPI
Sbjct: 345 PDWGENGYIRMERNVTARTGKCGIAMMASYPI 376


>gi|359359215|gb|AEV41119.1| putative cysteine protease [Oryza officinalis]
          Length = 499

 Score =  265 bits (677), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 148/332 (44%), Positives = 202/332 (60%), Gaps = 23/332 (6%)

Query: 12  VMSRTLHEDSISAKHELWMAQSARTYKNQ----AEKAMRFKIFKKNFRFIEKFNREGNQT 67
           V+ RT  E    A ++LW+A+      +      E   RF++F  N +F++  N   ++ 
Sbjct: 53  VVERT--EAEARAVYDLWVARHRHGGDSHNGLVGEYERRFRVFWDNLKFVDAHNARADEH 110

Query: 68  --YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWR 125
             ++L +N FADLT++EF A++ G   P     +  ++Y +      D    LP S+DWR
Sbjct: 111 GGFRLGMNRFADLTNDEFRAAYLG-TTPAGRGRHVGEAYRH------DGVEVLPDSVDWR 163

Query: 126 ARGAVT-PVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYG 181
            +GAV  PVKNQG CG CW FSAVAAVEGI KI TG L+SLSEQ++++C+    + GC G
Sbjct: 164 DKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECARNGANSGCNG 223

Query: 182 GWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYA 240
           G MDDAF++I R+ GL  E  YPY   +G CN  + + K   I  ++DVP   EL+L+ A
Sbjct: 224 GMMDDAFAFIARNGGLDTEEDYPYTAMDGKCNLAKKSRKVVSIDGFEDVPENDELSLQKA 283

Query: 241 VSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGS--SNEGPYWLIKNSWG 298
           V+ QPVSVAIDA    F+ Y  GVF G CG +L+H V  VGYG+  +    YW ++NSWG
Sbjct: 284 VAHQPVSVAIDAGGREFQLYDSGVFTGRCGTSLDHGVVAVGYGTDAATGTDYWTVRNSWG 343

Query: 299 QNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
            +WGE G+IRM R+V    G CGIA  ASYPI
Sbjct: 344 PDWGENGYIRMERNVTARTGKCGIAMMASYPI 375


>gi|302812789|ref|XP_002988081.1| hypothetical protein SELMODRAFT_183539 [Selaginella moellendorffii]
 gi|300144187|gb|EFJ10873.1| hypothetical protein SELMODRAFT_183539 [Selaginella moellendorffii]
          Length = 425

 Score =  265 bits (676), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 136/326 (41%), Positives = 196/326 (60%), Gaps = 26/326 (7%)

Query: 19  EDSISAKHELWMAQSAR-TYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFAD 77
           +  +S ++  W A+  +    + +    RF+ FK+NFR+IE+ NR G  +Y+L LN+F+D
Sbjct: 6   DSDLSGEYASWCAKFGKECASSNSLGDHRFETFKENFRYIEEHNRAGKHSYRLGLNQFSD 65

Query: 78  LTDEEFIASHTGY----------KMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           LT EEF     G           KMP    S+  + + N           LP S+DWR  
Sbjct: 66  LTSEEFRQRFLGLRPDLIDSPVLKMPRD--SDIEEGFQN---------VDLPASVDWRQH 114

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMD 185
           GAVT  K+QGSCG CW F+   A+EGI +I TG+L+SLSEQ+++DC     +GC GG M+
Sbjct: 115 GAVTAPKDQGSCGGCWAFATTGAIEGINQIVTGQLVSLSEQELIDCDKKADKGCDGGLME 174

Query: 186 DAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ 244
           +A+ +I+ + GL  E  YPY   E +CN ++   +   I  Y+ +P   E AL  AV++Q
Sbjct: 175 NAYQFIVENGGLDTETDYPYHASESHCNMKKLNSRVVAIDGYKAIPEGDEQALLLAVAKQ 234

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEG 304
           PVSVAI+ +S  F++Y+ GVF G CG  +NH V IVGYG+ +   YW++KNSW   WG+G
Sbjct: 235 PVSVAIEGASKDFQHYASGVFTGHCGEEINHGVLIVGYGTEDGLDYWIVKNSWAATWGDG 294

Query: 305 GFIRMRRDVGG-AGLCGIARKASYPI 329
           GF++M+R+ G   GLC I   ASYP+
Sbjct: 295 GFVKMQRNTGKRGGLCSINTLASYPV 320


>gi|595986|gb|AAA79915.1| cysteine proteinase, partial [Dianthus caryophyllus]
          Length = 427

 Score =  264 bits (675), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 140/312 (44%), Positives = 194/312 (62%), Gaps = 19/312 (6%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQT----YKLSLNEFADLTDEEFI 84
           W+ +  + Y    EK  RF IF+ N  FI++ N   N      ++L LN+FADLT++EF 
Sbjct: 8   WLVKHRKNYNALGEKEKRFAIFRDNLEFIDQHNNNNNGGGGGEFELGLNKFADLTNDEFR 67

Query: 85  ASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG--LPRSIDWRARGAVTPVKNQGSCGCC 142
             + G K P +  S +S  YA         + G  LP S+DWR +GAV+ VK+QG CG C
Sbjct: 68  RIYFGVKRPEKAESVKSDRYA--------VKEGDELPESVDWRKKGAVSHVKDQGQCGSC 119

Query: 143 WIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDE 200
           W FSA+ AVEGI KI TG LI+LSEQ+++DC  S   GC GG MD AF +II + G+  +
Sbjct: 120 WAFSAIGAVEGINKIVTGDLITLSEQELVDCDTSYNSGCDGGLMDYAFRFIINNGGIDTD 179

Query: 201 RVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRY 259
           + YPY+  +G C+  R   K   I   +DVP  +E AL+ AV+ QPV +AI+A    F+ 
Sbjct: 180 KDYPYKATDGSCDSNRKNAKVVTIDGLEDVPANNEKALQKAVAHQPVRLAIEAGGRDFQL 239

Query: 260 YSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDV-GGAG 317
           Y  GVF G CG +L+H V  VGYG++++G  YW+++NSWG +WGE G+IRM R+    +G
Sbjct: 240 YKSGVFTGSCGTSLDHGVVAVGYGTTDDGKDYWIVRNSWGDDWGEDGYIRMERNTESKSG 299

Query: 318 LCGIARKASYPI 329
            CGIA + SYP+
Sbjct: 300 KCGIAIEPSYPV 311


>gi|115461226|ref|NP_001054213.1| Os04g0670500 [Oryza sativa Japonica Group]
 gi|62510688|sp|Q7XR52.2|CYSP1_ORYSJ RecName: Full=Cysteine protease 1; AltName: Full=OsCP1; Flags:
           Precursor
 gi|38345300|emb|CAE02828.2| OSJNBa0043A12.33 [Oryza sativa Japonica Group]
 gi|113565784|dbj|BAF16127.1| Os04g0670500 [Oryza sativa Japonica Group]
 gi|215741575|dbj|BAG98070.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 490

 Score =  264 bits (675), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 147/327 (44%), Positives = 196/327 (59%), Gaps = 23/327 (7%)

Query: 19  EDSISAKHELWMAQSARTYKNQ------AEKAMRFKIFKKNFRFIEKFNREGNQT--YKL 70
           E    A ++LW+A+  R            E   RF++F  N +F++  N   ++   ++L
Sbjct: 55  EAEARAAYDLWLARHRRGGGGGSRNGFIGEHERRFRVFWDNLKFVDAHNARADERGGFRL 114

Query: 71  SLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAV 130
            +N FADLT+ EF A++ G   P        ++Y +      D    LP S+DWR +GAV
Sbjct: 115 GMNRFADLTNGEFRATYLG-TTPAGRGRRVGEAYRH------DGVEALPDSVDWRDKGAV 167

Query: 131 T-PVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDD 186
             PVKNQG CG CW FSAVAAVEGI KI TG L+SLSEQ++++C+    + GC GG MDD
Sbjct: 168 VAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECARNGQNSGCNGGIMDD 227

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQP 245
           AF++I R+ GL  E  YPY   +G CN  + + K   I  ++DVP   EL+L+ AV+ QP
Sbjct: 228 AFAFIARNGGLDTEEDYPYTAMDGKCNLAKRSRKVVSIDGFEDVPENDELSLQKAVAHQP 287

Query: 246 VSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGS--SNEGPYWLIKNSWGQNWGE 303
           VSVAIDA    F+ Y  GVF G CG NL+H V  VGYG+  +    YW ++NSWG +WGE
Sbjct: 288 VSVAIDAGGREFQLYDSGVFTGRCGTNLDHGVVAVGYGTDAATGAAYWTVRNSWGPDWGE 347

Query: 304 GGFIRMRRDVGG-AGLCGIARKASYPI 329
            G+IRM R+V    G CGIA  ASYPI
Sbjct: 348 NGYIRMERNVTARTGKCGIAMMASYPI 374


>gi|90399361|emb|CAJ86180.1| H0212B02.7 [Oryza sativa Indica Group]
          Length = 470

 Score =  264 bits (675), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 139/322 (43%), Positives = 194/322 (60%), Gaps = 29/322 (9%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEFADLTDEEFIA 85
           W A+  + Y    E+  R+  F+ N R+I++ N     G  +++L LN FADLT+EE+  
Sbjct: 43  WKAEHGKNYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRD 102

Query: 86  SHTGYKMPTRNISNQSQSY--ANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCW 143
           ++ G +   R     S  Y  A+N          LP S+DWR +GAV  +K+QG CG CW
Sbjct: 103 TYLGLRNKPRRERKVSDRYLAADN--------EALPESVDWRTKGAVAEIKDQGGCGSCW 154

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDER 201
            FSA+AAVEGI +I TG LISLSEQ+++DC  S   GC GG MD AF +II + G+  E 
Sbjct: 155 AFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGGIDTED 214

Query: 202 VYPYQRREGYCNWQRGAM------------KAARIRSYQDV-PTSELALRYAVSRQPVSV 248
            YPY+ ++  C+  R +             K   I SY+DV P SE +L+ AV+ QPVSV
Sbjct: 215 DYPYKGKDERCDVNRVSFVFFAPLVFQKNAKVVTIDSYEDVTPNSETSLQKAVANQPVSV 274

Query: 249 AIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIR 308
           AI+A    F+ YS G+F G CG  L+H V  VGYG+ N   YW+++NSWG++WGE G++R
Sbjct: 275 AIEAGGRAFQLYSSGIFTGKCGTALDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVR 334

Query: 309 MRRDV-GGAGLCGIARKASYPI 329
           M R++   +G CGIA + SYP+
Sbjct: 335 MERNIKASSGKCGIAVEPSYPL 356


>gi|90265242|emb|CAH67695.1| H0624F09.3 [Oryza sativa Indica Group]
          Length = 494

 Score =  264 bits (675), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 147/327 (44%), Positives = 196/327 (59%), Gaps = 23/327 (7%)

Query: 19  EDSISAKHELWMAQSARTYKNQ------AEKAMRFKIFKKNFRFIEKFNREGNQT--YKL 70
           E    A ++LW+A+  R            E   RF++F  N +F++  N   ++   ++L
Sbjct: 55  EAEARAAYDLWLARHRRGGGGGSRNGFIGEHERRFRVFWDNLKFVDAHNARADERGGFRL 114

Query: 71  SLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAV 130
            +N FADLT+ EF A++ G   P        ++Y +      D    LP S+DWR +GAV
Sbjct: 115 GMNRFADLTNGEFRATYLG-TTPAGRGRRVGEAYRH------DGVEALPDSVDWRDKGAV 167

Query: 131 T-PVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDD 186
             PVKNQG CG CW FSAVAAVEGI KI TG L+SLSEQ++++C+    + GC GG MDD
Sbjct: 168 VAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECARNGQNSGCNGGIMDD 227

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQP 245
           AF++I R+ GL  E  YPY   +G CN  + + K   I  ++DVP   EL+L+ AV+ QP
Sbjct: 228 AFAFIARNGGLDTEEDYPYTAMDGKCNLAKRSRKVVSIDGFEDVPENDELSLQKAVAHQP 287

Query: 246 VSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGS--SNEGPYWLIKNSWGQNWGE 303
           VSVAIDA    F+ Y  GVF G CG NL+H V  VGYG+  +    YW ++NSWG +WGE
Sbjct: 288 VSVAIDAGGREFQLYDSGVFTGRCGTNLDHGVVAVGYGTDAATGAAYWTVRNSWGPDWGE 347

Query: 304 GGFIRMRRDVGG-AGLCGIARKASYPI 329
            G+IRM R+V    G CGIA  ASYPI
Sbjct: 348 NGYIRMERNVTARTGKCGIAMMASYPI 374


>gi|357507617|ref|XP_003624097.1| Cysteine protease [Medicago truncatula]
 gi|355499112|gb|AES80315.1| Cysteine protease [Medicago truncatula]
          Length = 340

 Score =  264 bits (675), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 144/335 (42%), Positives = 205/335 (61%), Gaps = 22/335 (6%)

Query: 3   IIMVTWASLVMSRTLHED---SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           I++V W     ++    D   ++S +++ W  +    YK+ AE+    +IFK N  +I+ 
Sbjct: 13  ILIVIWVMFPSNQNQENDQSLTLSERYKHWKIKYRVIYKDDAEEEKHIQIFKHNVAYIDS 72

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLP 119
           FN  GN++YKL++N FADL  E    S  G+K        + +   ++ F Y +    +P
Sbjct: 73  FNAAGNKSYKLTINRFADLPTE---PSDDGFK------KRKLEPTTSSLFKYKNI-TDIP 122

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLD---CSGS 176
            ++DWR RGAVTPVKNQ  CG CW FSAV A+EGI +I +G L+SLSEQ+++D    + +
Sbjct: 123 AAVDWRKRGAVTPVKNQRECGSCWAFSAVGALEGIQQITSGNLVSLSEQELVDRVRSNWT 182

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSEL 235
            GC GG++ DAF +++ + G+  E  YPY+  +G  N  +   +  +I+SY+ VP  SE 
Sbjct: 183 NGCNGGYLIDAFEFVLENGGIATEASYPYRGVKG--NNSKKVSRQVQIKSYEQVPRNSED 240

Query: 236 ALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIK 294
           +L   V+ QPVSV ID S    R+YS G+F G CG   NHAV IVGYG+SN+G  YWL+K
Sbjct: 241 SLLKVVANQPVSVGIDISGM-IRFYSSGIFTGECGTKPNHAVIIVGYGTSNDGTKYWLVK 299

Query: 295 NSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYP 328
           NSWG  WGE  +IRM+RD+    GLCGI   ASYP
Sbjct: 300 NSWGIRWGEKRYIRMKRDIDAKEGLCGIPMDASYP 334


>gi|255546708|ref|XP_002514413.1| cysteine protease, putative [Ricinus communis]
 gi|223546510|gb|EEF48009.1| cysteine protease, putative [Ricinus communis]
          Length = 324

 Score =  264 bits (674), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 147/346 (42%), Positives = 198/346 (57%), Gaps = 52/346 (15%)

Query: 2   LIIMVTWASLVMSRTLHED---------SISAKHEL------WMAQSARTYKNQAEKAMR 46
           + +   + SLV+   +  D          +++ H+L      WM++  +TY++  EK  R
Sbjct: 8   IFLFTIFTSLVICSVVAHDFSIVGYSPEHLTSMHKLTELFESWMSKHGKTYESIEEKLHR 67

Query: 47  FKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYAN 106
            ++FK N   I++ NR+   TY L+LNEFADL+ EEF                       
Sbjct: 68  LEVFKDNLMHIDRRNRDVT-TYWLALNEFADLSHEEF----------------------- 103

Query: 107 NWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLS 166
                  S+    R ++   +GAV PVKNQGSCG CW FS VAAVEGI +I TG L SLS
Sbjct: 104 ------KSKLAQIRRLE---KGAVAPVKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLS 154

Query: 167 EQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARI 224
           EQ+++DC  S   GC GG MD AF YI+ + GL  E  YPY   EG C+ +R  M+   I
Sbjct: 155 EQELIDCDTSFNSGCNGGLMDYAFDYIVNNGGLHKEEDYPYLMEEGTCDEKREEMEVVTI 214

Query: 225 RSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYG 283
             Y DVP  +E +L  A++ QP+S+AI+AS   F++Y  GVF GPCG +L+H V  VGYG
Sbjct: 215 SGYHDVPENNEESLLKALAHQPLSIAIEASGRDFQFYGRGVFNGPCGTDLDHGVAAVGYG 274

Query: 284 SSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           SS    Y ++KNSWG  WGE G+IRM+R+ G   GLCGI + ASYP
Sbjct: 275 SSKGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYP 320


>gi|242040563|ref|XP_002467676.1| hypothetical protein SORBIDRAFT_01g032090 [Sorghum bicolor]
 gi|241921530|gb|EER94674.1| hypothetical protein SORBIDRAFT_01g032090 [Sorghum bicolor]
          Length = 358

 Score =  264 bits (674), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 143/307 (46%), Positives = 200/307 (65%), Gaps = 13/307 (4%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           W A   R+Y    E+  RF+++++N   IE  NR GN TY L  N+FADLT+EEF+  +T
Sbjct: 60  WQATYNRSYPTAEERQRRFQVYRRNMEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 119

Query: 89  GYKMPT--RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQG-SCGCCWIF 145
              MP   R+   + Q+   N+    D+    P S+DWR+RGAVTP+KNQG SC  CW F
Sbjct: 120 MKGMPPVRRDAGKKQQA---NFSSVVDA----PTSVDWRSRGAVTPIKNQGPSCSSCWAF 172

Query: 146 SAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQGLTDERVYP 204
              A +E IT+IRTG+L+SLSEQ+++DC     GC  G+  + + ++I++ GLT E  YP
Sbjct: 173 VTAATIESITQIRTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYKWVIQNGGLTTEANYP 232

Query: 205 YQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGFRYYSGGV 264
           YQ R   CN  +   +AARI +Y+ +P  E  L+ AV++QPV+ AI+      ++YSGGV
Sbjct: 233 YQARRYQCNRSKAGQRAARISNYRQLPQGEAQLQQAVAQQPVAAAIEMGG-SLQFYSGGV 291

Query: 265 FAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIAR 323
           ++G CG  +NHA+T+VGYG+ + G  YWL+KNSWGQ WGE G++RMR+DV   GLCGIA 
Sbjct: 292 WSGQCGTRMNHAITVVGYGADSSGVKYWLVKNSWGQTWGERGYLRMRKDVRQGGLCGIAL 351

Query: 324 KASYPIA 330
             +YPI 
Sbjct: 352 DLAYPIV 358


>gi|57118005|gb|AAW34134.1| cysteine protease gp2a [Zingiber officinale]
          Length = 381

 Score =  264 bits (674), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 140/308 (45%), Positives = 192/308 (62%), Gaps = 20/308 (6%)

Query: 35  RTYKNQAEKAM-----RFKIFKKNFRFIEKFN---REGNQTYKLSLNEFADLTDEEFIAS 86
           R   + AEK +     R ++FK+N +F+++ N     G  T+ L +N FADLT+EE+   
Sbjct: 57  RVKNHPAEKYLDLNEYRLEVFKENLQFVDEHNAAADRGEHTFLLGMNRFADLTNEEYRTR 116

Query: 87  HTGYKMPTRNISNQSQSYANNWFGYPDSRRG--LPRSIDWRARGAVTPVKNQGSCGCCWI 144
                   R+ S   +S +         R G  LP SIDWR  GAV PVKNQG CG CW 
Sbjct: 117 FL------RDFSRLRRSASGKISSRYRLREGDDLPDSIDWRENGAVVPVKNQGGCGSCWA 170

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDCS-GSRGCYGGWMDDAFSYIIRSQGLTDERVY 203
           FS VAAVEGI +I TG LISLSEQQ++DC+  + GC GGWM+ AF +I+ + G+  E  Y
Sbjct: 171 FSTVAAVEGINQIVTGDLISLSEQQLVDCTTANHGCRGGWMNPAFQFIVNNGGINSEETY 230

Query: 204 PYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSG 262
           PY+ + G CN    A     I SY++VP+ +E +L+ AV+ QPVSV +DA+   F+ Y  
Sbjct: 231 PYRGQNGICNSTVNA-PVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRS 289

Query: 263 GVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGI 321
           G+F G C  + NHA+T+VGYG+ N+  +W++KNSWG+NWGE G+IR  R++    G CGI
Sbjct: 290 GIFTGSCNISANHALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENPNGKCGI 349

Query: 322 ARKASYPI 329
            R ASYP+
Sbjct: 350 TRFASYPV 357


>gi|168017893|ref|XP_001761481.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687165|gb|EDQ73549.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 471

 Score =  264 bits (674), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 146/332 (43%), Positives = 203/332 (61%), Gaps = 18/332 (5%)

Query: 9   ASLVMSRTLHE----DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREG 64
           A  +M    HE    D +      W+ + +R Y + +EK  RF+IFK N  +I   N++ 
Sbjct: 31  ADAIMDYEAHELHSDDGMLDVFHQWLERHSRVYHSLSEKQRRFQIFKDNLHYIHNHNKQ- 89

Query: 65  NQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDW 124
            ++Y L LN+F+DLT +EF A + G +   R    ++     + F Y D        +DW
Sbjct: 90  EKSYWLGLNKFSDLTHDEFRALYLGIRPAGRAHGLRN----GDRFIYEDVV--AEEMVDW 143

Query: 125 RARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGG 182
           R +GAV+ VK+QGSCG CW FSA+ +VEG+  I TG LISLSEQ+++DC    ++GC GG
Sbjct: 144 RKKGAVSDVKDQGSCGSCWAFSAIGSVEGVNAIVTGELISLSEQELVDCDRGQNQGCNGG 203

Query: 183 WMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAM-KAARIRSYQDVPT-SELALRYA 240
            MD AF +II++ G+  E  YPY+  +G C+  R    K   I  YQDVPT SE +L  A
Sbjct: 204 LMDYAFDFIIKNGGIDTEEDYPYKATDGQCDEARKETSKVVVIDDYQDVPTKSESSLLKA 263

Query: 241 VSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQ 299
           VS+ PVSVAI+A    F++Y GGVF GPCG +L+H V  VGYG+ ++G  YW++KNSWG 
Sbjct: 264 VSKNPVSVAIEAGGRDFQHYQGGVFTGPCGTDLDHGVLAVGYGTDDDGVNYWIVKNSWGP 323

Query: 300 NWGEGGFIRMRR--DVGGAGLCGIARKASYPI 329
           +WGE G+IRM R      +G CGI  + S+PI
Sbjct: 324 SWGEKGYIRMERMGSNSTSGKCGINIEPSFPI 355


>gi|359473128|ref|XP_002285397.2| PREDICTED: vignain-like [Vitis vinifera]
          Length = 357

 Score =  263 bits (673), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 141/335 (42%), Positives = 203/335 (60%), Gaps = 13/335 (3%)

Query: 5   MVTWASLVMSRTLHEDSISAKHELW-MAQSARTY----KNQAEKAMRFKIFKKNFRFIEK 59
           +V    L  S    E  ++++  LW + +  R+Y    ++  EK  RF +FK+N + + K
Sbjct: 11  LVLVFGLAESFDFDEKDLASEESLWDLYERWRSYHTVSRDLEEKNKRFNVFKENTKHVHK 70

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLP 119
            N+  ++ YKL LN+FAD+T+ EF +S+ G K+    +    +     +    +    LP
Sbjct: 71  VNQM-DKPYKLKLNKFADMTNHEFRSSYGGSKVKHYRMLRGDRRGTGGFM--HEKTTYLP 127

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSR 177
            S+DWR +GAVT +K+QG CG CW FS V  VEGI +I+T  L+SLSEQQ++DC  S   
Sbjct: 128 PSVDWRKKGAVTGIKDQGKCGSCWAFSTVVGVEGINQIKTKELLSLSEQQLIDCDRSDDH 187

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELA 236
           GC GG M+ AF +I ++ G+T E  YPY+ ++  C+  +       I  ++ VP + E A
Sbjct: 188 GCNGGLMESAFEFIKKNGGITTENNYPYKAKDERCDMLKMNAPVVTIDGHESVPVNDERA 247

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKN 295
           L  AV+ QPVSVAIDA     ++YS GVF G CG  L+H V IVGYG++ +G  YW++KN
Sbjct: 248 LMKAVAHQPVSVAIDAGGSDLQFYSEGVFDGECGTELDHGVAIVGYGTTLDGTKYWIVKN 307

Query: 296 SWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPI 329
           SWG  WGE G+IRM R +  A G CGIA +ASYP+
Sbjct: 308 SWGAEWGEKGYIRMARGIQAAEGQCGIAMEASYPV 342


>gi|302781881|ref|XP_002972714.1| hypothetical protein SELMODRAFT_98707 [Selaginella moellendorffii]
 gi|300159315|gb|EFJ25935.1| hypothetical protein SELMODRAFT_98707 [Selaginella moellendorffii]
          Length = 446

 Score =  263 bits (673), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 131/291 (45%), Positives = 184/291 (63%), Gaps = 11/291 (3%)

Query: 46  RFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYK---MPTRNISNQSQ 102
           RF+ FK+NFR+IE+ NR G  +Y+L LN+F+DLT EEF     G +   + +  +     
Sbjct: 34  RFETFKENFRYIEEHNRAGKHSYRLGLNQFSDLTSEEFRQRFLGLRPDLIDSPVLKMPRD 93

Query: 103 SYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRL 162
           S     F   D    LP S+DWR  GAVT  K+QGSCG CW F+   A+EGI +I TG+L
Sbjct: 94  SDIEEGFQNVD----LPASVDWRKHGAVTAPKDQGSCGGCWAFATTGAIEGINQIVTGQL 149

Query: 163 ISLSEQQVLDCS--GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMK 220
           +SLSEQ+++DC     +GC GG M++A+ +I+ + GL  E  YPY   E +CN ++   +
Sbjct: 150 MSLSEQELIDCDKKADKGCDGGLMENAYQFIVENGGLDTETDYPYHASESHCNMKKLNSR 209

Query: 221 AARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTI 279
              I  Y+ +P   E AL  AV++QPVSVAI+ +S  F++Y+ GVF G CG  +NH V I
Sbjct: 210 VVAIDGYEAIPDGDEQALLRAVAKQPVSVAIEGASKDFQHYASGVFTGHCGEEINHGVLI 269

Query: 280 VGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
           VGYG+ +   YW++KNSW   WG+GGF++M+R+ G   GLC I   ASYP+
Sbjct: 270 VGYGTEDGLDYWIVKNSWAATWGDGGFVKMQRNTGKRGGLCSINTLASYPV 320


>gi|296081395|emb|CBI16828.3| unnamed protein product [Vitis vinifera]
          Length = 359

 Score =  263 bits (673), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 141/335 (42%), Positives = 203/335 (60%), Gaps = 13/335 (3%)

Query: 5   MVTWASLVMSRTLHEDSISAKHELW-MAQSARTY----KNQAEKAMRFKIFKKNFRFIEK 59
           +V    L  S    E  ++++  LW + +  R+Y    ++  EK  RF +FK+N + + K
Sbjct: 13  LVLVFGLAESFDFDEKDLASEESLWDLYERWRSYHTVSRDLEEKNKRFNVFKENTKHVHK 72

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLP 119
            N+  ++ YKL LN+FAD+T+ EF +S+ G K+    +    +     +    +    LP
Sbjct: 73  VNQM-DKPYKLKLNKFADMTNHEFRSSYGGSKVKHYRMLRGDRRGTGGFM--HEKTTYLP 129

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSR 177
            S+DWR +GAVT +K+QG CG CW FS V  VEGI +I+T  L+SLSEQQ++DC  S   
Sbjct: 130 PSVDWRKKGAVTGIKDQGKCGSCWAFSTVVGVEGINQIKTKELLSLSEQQLIDCDRSDDH 189

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELA 236
           GC GG M+ AF +I ++ G+T E  YPY+ ++  C+  +       I  ++ VP + E A
Sbjct: 190 GCNGGLMESAFEFIKKNGGITTENNYPYKAKDERCDMLKMNAPVVTIDGHESVPVNDERA 249

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKN 295
           L  AV+ QPVSVAIDA     ++YS GVF G CG  L+H V IVGYG++ +G  YW++KN
Sbjct: 250 LMKAVAHQPVSVAIDAGGSDLQFYSEGVFDGECGTELDHGVAIVGYGTTLDGTKYWIVKN 309

Query: 296 SWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPI 329
           SWG  WGE G+IRM R +  A G CGIA +ASYP+
Sbjct: 310 SWGAEWGEKGYIRMARGIQAAEGQCGIAMEASYPV 344


>gi|302764466|ref|XP_002965654.1| hypothetical protein SELMODRAFT_230713 [Selaginella moellendorffii]
 gi|300166468|gb|EFJ33074.1| hypothetical protein SELMODRAFT_230713 [Selaginella moellendorffii]
          Length = 345

 Score =  263 bits (672), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 141/317 (44%), Positives = 192/317 (60%), Gaps = 21/317 (6%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +   ++ W+ +  + Y +  E   RF+IFK+N  +I   N   N ++ L LN+FADLT
Sbjct: 32  DPLWQVYQKWIQEHGKAYNSAHEYKKRFQIFKENVNYINSHNARRNNSHSLGLNKFADLT 91

Query: 80  DEEFIASHTGY---KMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQ 136
           + EF   + G      P   + + +           D+      S+DWR +G VT +K+Q
Sbjct: 92  NSEFRGLYVGRLQRPAPFHEVGDIAL--------VADT----ATSVDWRKKGGVTEIKDQ 139

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRS 194
           G CG CW FSAVAAVEG+T + TG L+SLSEQ+++DC  +  +GC GG MD AF Y+IR+
Sbjct: 140 GDCGSCWAFSAVAAVEGLTFLSTGTLVSLSEQELVDCDTTVNQGCDGGIMDYAFQYMIRN 199

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP--TSELALRYAVSRQPVSVAIDA 252
            G+T +  YPY+   G C+  +    AA I  +Q +P  + EL LR AV+ QPVSVAI+A
Sbjct: 200 GGITSQSNYPYRALRGACDKDKVKYHAATINGFQAIPPQSEELLLR-AVANQPVSVAIEA 258

Query: 253 SSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRR 311
               F+ YS GVF G CG+NL+H V IVGYG+   G  YWL+KNSWG  WGE G++RM R
Sbjct: 259 GGQDFQLYSSGVFTGECGSNLDHGVAIVGYGTDAGGRQYWLVKNSWGSGWGESGYVRMER 318

Query: 312 DVGGAGLCGIARKASYP 328
              GAG+CGI   ASYP
Sbjct: 319 QGPGAGVCGINLDASYP 335


>gi|351726339|ref|NP_001237379.1| cysteine proteinase precursor [Glycine max]
 gi|31559526|dbj|BAC77521.1| cysteine proteinase [Glycine max]
 gi|31559528|dbj|BAC77522.1| cysteine proteinase [Glycine max]
          Length = 362

 Score =  263 bits (672), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 140/326 (42%), Positives = 200/326 (61%), Gaps = 13/326 (3%)

Query: 14  SRTLHEDSISAKHELW-MAQSARTY----KNQAEKAMRFKIFKKNFRFIEKFNREGNQTY 68
           S   H+  ++++   W + +  R++    ++  +K  RF +FK N   +   N+  ++ Y
Sbjct: 22  SFDFHDKDLASEESFWDLYERWRSHHTVSRSLGDKHKRFNVFKANVMHVHNTNKM-DKPY 80

Query: 69  KLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARG 128
           KL LN+FAD+T+ EF +++ G K+    +  Q     N  F Y +    +P S+DWR  G
Sbjct: 81  KLKLNKFADMTNHEFRSTYAGSKVNHHRMF-QGTPRGNGTFMY-EKVGSVPPSVDWRKNG 138

Query: 129 AVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR--GCYGGWMDD 186
           AVT VK+QG CG CW FS V AVEGI +I+T +L+SLSEQ+++DC   +  GC GG M+ 
Sbjct: 139 AVTGVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVSLSEQELVDCDTKKNAGCNGGLMES 198

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQP 245
           AF +I +  G+T E  YPY  ++G C+  +    A  I  +++VP + E AL  AV+ QP
Sbjct: 199 AFEFIKQKGGITTESNYPYTAQDGTCDASKANDLAVSIDGHENVPANDENALLKAVANQP 258

Query: 246 VSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEG 304
           VSVAIDA    F++YS GVF G C   LNH V IVGYG++ +G  YW ++NSWG  WGE 
Sbjct: 259 VSVAIDAGGSDFQFYSEGVFTGDCSTELNHGVAIVGYGTTVDGTNYWTVRNSWGPEWGEQ 318

Query: 305 GFIRMRRDVG-GAGLCGIARKASYPI 329
           G+IRM+R +    GLCGIA  ASYPI
Sbjct: 319 GYIRMQRSISKKEGLCGIAMMASYPI 344


>gi|160858205|dbj|BAF93840.1| triticain beta 2 [Triticum aestivum]
          Length = 469

 Score =  263 bits (672), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 138/326 (42%), Positives = 198/326 (60%), Gaps = 25/326 (7%)

Query: 19  EDSISAKHELWMAQ-SARTYKNQ---AEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLS 71
           E    A ++LW+A+    +Y N     E+  RF+ F  N RF++  N     G + ++L+
Sbjct: 43  EAEARAVYDLWLAEHGGGSYPNANSIPERERRFRAFWDNLRFVDAHNARAAAGEEGFRLA 102

Query: 72  LNEFADLTDEEFIASHTGYK----MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           +N FADLT++EF A++ G K     P R +  + +          D    LP ++DWR +
Sbjct: 103 MNRFADLTNDEFRAAYLGVKGQRARPGRVVGERYRH---------DGAEELPEAVDWREK 153

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYGGWM 184
           GAV PVKNQG CG CW FSA++ VE I +I TG +++LSEQ++++C     S GC GG M
Sbjct: 154 GAVAPVKNQGQCGSCWAFSAISTVESINQIVTGEMVTLSEQELVECDTNGQSSGCNGGLM 213

Query: 185 DDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSR 243
           DDAF +II++ G+  E  YPY+  +G C+  R   K   I  ++DVP   E +L+ AV+ 
Sbjct: 214 DDAFEFIIKNGGIDTEDDYPYKAIDGRCDVLRKNAKVVSIDGFEDVPENDEKSLQKAVAH 273

Query: 244 QPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGE 303
           QPVSVAI+A    F+ Y  GVF+G CG  L+H V  VGYG+ N   YW+++NSWG NWGE
Sbjct: 274 QPVSVAIEAGGREFQLYHSGVFSGRCGTQLDHGVVAVGYGTENGKDYWIVRNSWGPNWGE 333

Query: 304 GGFIRMRRDVG-GAGLCGIARKASYP 328
            G++RM R++   +G CGIA  +SYP
Sbjct: 334 AGYLRMERNINVTSGKCGIAMMSSYP 359


>gi|356509992|ref|XP_003523725.1| PREDICTED: oryzain alpha chain-like [Glycine max]
          Length = 439

 Score =  263 bits (672), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 138/311 (44%), Positives = 184/311 (59%), Gaps = 15/311 (4%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGN-----QTYKLSLNEFADLTDE 81
           E W  + ++TY ++ EK  R K+F+ N+ F+ + N+  N      +Y LSLN FADLT  
Sbjct: 34  EKWCKEHSKTYSSEEEKLYRLKVFEDNYAFVAQHNQNANNNNNNSSYTLSLNAFADLTHH 93

Query: 82  EFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGC 141
           EF  +  G  +            + +          +P  IDWR  GAVTPVK+Q SCG 
Sbjct: 94  EFKTTRLGLPLTLLRFKRPQNQQSRDLLH-------IPSQIDWRQSGAVTPVKDQASCGA 146

Query: 142 CWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTD 199
           CW FSA  A+EGI KI TG L+SLSEQ+++DC  S   GC GG MD A+ ++I ++G+  
Sbjct: 147 CWAFSATGAIEGINKIVTGSLVSLSEQELIDCDTSYNSGCGGGLMDFAYQFVIDNKGIDT 206

Query: 200 ERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGFRY 259
           E  YPYQ R+  C+  +   +A  I  Y DVP SE  +  AV+ QPVSV I  S   F+ 
Sbjct: 207 EDDYPYQARQRSCSKDKLKRRAVTIEDYVDVPPSEEEILKAVASQPVSVGICGSEREFQL 266

Query: 260 YSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GL 318
           YS G+F GPC   L+HAV IVGYGS N   YW++KNSWG+ WG  G+I M R+ G + G+
Sbjct: 267 YSKGIFTGPCSTFLDHAVLIVGYGSENGVDYWIVKNSWGKYWGMNGYIHMIRNSGNSKGI 326

Query: 319 CGIARKASYPI 329
           CGI   ASYP+
Sbjct: 327 CGINTLASYPV 337


>gi|168006315|ref|XP_001755855.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693174|gb|EDQ79528.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 454

 Score =  263 bits (671), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 141/327 (43%), Positives = 201/327 (61%), Gaps = 16/327 (4%)

Query: 11  LVMSRTL-HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYK 69
           L M+  L +E  +S +   W  +  + Y +  E A R+ ++K N  +I++ + E N++Y 
Sbjct: 30  LRMTTDLGNERLLSEQFGAWAHKHGKVYSSLEEHAHRYMVWKDNLEYIQR-HSEKNRSYW 88

Query: 70  LSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGA 129
           L L +FAD+T++EF   +TG +     I    +S     F Y DS    P S+DWR +GA
Sbjct: 89  LGLTKFADITNDEFRRQYTGTR-----IDRSKRSKRKTGFRYADSE--APESVDWRKKGA 141

Query: 130 VTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDA 187
           VT VK+QGSCG CW FSA+ +VEGI  IRTG  +SLSEQ+++DC    ++GC GG MD A
Sbjct: 142 VTTVKDQGSCGSCWAFSAIGSVEGINAIRTGEAVSLSEQELVDCDLEYNQGCNGGLMDYA 201

Query: 188 FSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPV 246
           F +I+ + G+  E  YPY+  +G C+  +       I  Y+DVP   E AL+ AV+ QPV
Sbjct: 202 FDFILENGGIDTENDYPYKGLDGRCDNNKKNAHVVTIDGYEDVPENDEEALKKAVAGQPV 261

Query: 247 SVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGF 306
           SVAI+A    F+ YSGGVF G CG +L+H V  VGYGS     YW++KNSWG+ WGE G+
Sbjct: 262 SVAIEAGGRDFQLYSGGVFTGECGTDLDHGVLAVGYGSEGSLDYWIVKNSWGEYWGESGY 321

Query: 307 IRMRRDVGGA----GLCGIARKASYPI 329
           +RM+R++  +    GLCGI  + SY +
Sbjct: 322 LRMQRNIKDSNHQFGLCGINIEPSYAV 348


>gi|111073717|dbj|BAF02547.1| triticain beta [Triticum aestivum]
          Length = 472

 Score =  263 bits (671), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 138/326 (42%), Positives = 196/326 (60%), Gaps = 25/326 (7%)

Query: 19  EDSISAKHELWMAQ----SARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLS 71
           E    A ++LW+A+    S+    +  E+  RF+ F  N  F++  N     G + Y+L 
Sbjct: 46  EAEARAVYDLWLAENGGGSSPNANSIPERERRFRAFWDNLNFVDAHNARAAAGEEGYRLG 105

Query: 72  LNEFADLTDEEFIASHTGYKM----PTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           +N FADLT++EF A++ G K     P R +  + +          D    LP ++DWR +
Sbjct: 106 MNRFADLTNDEFRAAYLGVKAQRARPGRMVGERYRH---------DGAEELPEAVDWREK 156

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYGGWM 184
           GAV PVKNQG CG CW FSAV+ VE I +I TG +++LSEQ++++C     S GC GG M
Sbjct: 157 GAVAPVKNQGQCGSCWAFSAVSTVESINQIVTGEMVTLSEQELVECDTNGQSSGCNGGLM 216

Query: 185 DDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSR 243
           DDAF +II++ G+  E  YPY+  +G C+  R   K   I  ++DVP   E +L+ AV+ 
Sbjct: 217 DDAFEFIIKNGGIDTEDDYPYKAIDGRCDVLRKNAKVVSIDGFEDVPENDEKSLQKAVAH 276

Query: 244 QPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGE 303
           QPVSVAI+A    F+ Y  GVF+G CG  L+H V  VGYG+ N   YW+++NSWG NWGE
Sbjct: 277 QPVSVAIEAGGREFQLYHSGVFSGRCGTQLDHGVVAVGYGTENGKDYWIVRNSWGPNWGE 336

Query: 304 GGFIRMRRDVG-GAGLCGIARKASYP 328
            G++RM R++   +G CGIA  +SYP
Sbjct: 337 SGYLRMERNINVTSGKCGIAMMSSYP 362


>gi|218183|dbj|BAA14403.1| oryzain beta precursor [Oryza sativa Japonica Group]
          Length = 471

 Score =  263 bits (671), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 137/319 (42%), Positives = 195/319 (61%), Gaps = 16/319 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQ--AEKAMRFKIFKKNFRFIEKFNREGNQT--YKLSLNE 74
           E    A ++LW+A++     N    E   RF +F  N +F++  N   ++   ++L +N 
Sbjct: 44  EAEARAAYDLWLAENGGGSPNALGGEHERRFLVFWDNLKFVDAHNARADEGGGFRLGMNR 103

Query: 75  FADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVK 134
           FADLT+EEF A+  G K+  R+ +   + Y +      D    LP S+DWR +GAV PVK
Sbjct: 104 FADLTNEEFRATFLGAKVAERSRA-AGERYRH------DGVEELPESVDWREKGAVAPVK 156

Query: 135 NQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---RGCYGGWMDDAFSYI 191
           NQG CG CW FSAV+ VE I ++ TG +I+LSEQ++++CS +    GC GG M DAF +I
Sbjct: 157 NQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMADAFDFI 216

Query: 192 IRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAI 250
           I++ G+  E  YPY+  +G C+  R   K   I  ++DVP   E +L+ AV+ QPVSVAI
Sbjct: 217 IKNGGIDTEDDYPYKAVDGKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAI 276

Query: 251 DASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMR 310
           +A    F+ Y  GVF+G CG +L+H V  VGYG+ N   YW+++NSWG  WGE G++RM 
Sbjct: 277 EAGGREFQLYHSGVFSGRCGTSLDHGVVAVGYGTDNGKDYWIVRNSWGPKWGESGYVRME 336

Query: 311 RDVG-GAGLCGIARKASYP 328
           R++    G CGIA  ASYP
Sbjct: 337 RNINVTTGKCGIAMMASYP 355


>gi|194352756|emb|CAQ00106.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
          Length = 476

 Score =  263 bits (671), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 136/322 (42%), Positives = 198/322 (61%), Gaps = 15/322 (4%)

Query: 19  EDSISAKHELWMAQ----SARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLS 71
           E    A ++LW+A+    S+    + A++  RF  F  N RF++  N     G + ++L+
Sbjct: 45  EAEARAVYDLWLAEHGGGSSPNANSIADRERRFSAFWDNLRFVDAHNARAAAGEEGFRLA 104

Query: 72  LNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVT 131
           +N FADLT++EF A++ G K       N++     + + + D    LP ++DWR +GAV 
Sbjct: 105 MNRFADLTNDEFRAAYLGVKGAAER--NRAGRVVGDRYRH-DGAEELPEAVDWREKGAVA 161

Query: 132 PVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAF 188
           PVKNQG CG CW FSAV+ VE I +I TG +++LSEQ++++C     S GC GG MDDAF
Sbjct: 162 PVKNQGQCGSCWAFSAVSTVESINQIVTGEMVTLSEQELVECDINGQSSGCNGGLMDDAF 221

Query: 189 SYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVS 247
            +II++ G+  E  YPY+  +G C+  R   K   I  ++DVP   E +L+ AV+  PVS
Sbjct: 222 EFIIKNGGIDTEDDYPYKAVDGRCDVLRKNAKVVSIDGFEDVPENDEKSLQKAVAHHPVS 281

Query: 248 VAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFI 307
           VAI+A    F+ Y  GVF+G CG  L+H V  VGYG+ N   YW+++NSWG NWGE G++
Sbjct: 282 VAIEAGGREFQLYHSGVFSGRCGTQLDHGVVAVGYGTENGKDYWIVRNSWGPNWGEAGYL 341

Query: 308 RMRRDVG-GAGLCGIARKASYP 328
           RM R++   +G CGIA  +SYP
Sbjct: 342 RMERNINVTSGKCGIAMMSSYP 363


>gi|326494040|dbj|BAJ85482.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 355

 Score =  263 bits (671), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 141/314 (44%), Positives = 188/314 (59%), Gaps = 11/314 (3%)

Query: 25  KHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFI 84
           +HE WMA+  R Y + AEK  R ++F  N R I+  NR GN+TY L LN F+DLT+EEF 
Sbjct: 40  RHERWMAKYGRVYADAAEKLRRQEVFAANARHIDAVNRAGNRTYTLGLNHFSDLTNEEFA 99

Query: 85  ASHTGYK-MPTRNISNQSQSYANNWFGYPDSR-RGLPRSIDWRARGAVTPVKNQGSCGCC 142
            +H GY+  P         S         D++ +  P S+DWRARGAVTPVK+QG CG C
Sbjct: 100 QTHLGYRHQPGPGGLRPEDSSPAAAVNVTDAQLQSTPDSVDWRARGAVTPVKHQGHCGSC 159

Query: 143 WIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-GSRGCYGGWMDDAFSYIIRSQGLTDER 201
           W F+AVAA EG+ +I TG LIS+SEQQVLDC+ G+  C  G+++ A +YI  S GL  E 
Sbjct: 160 WAFAAVAATEGLVQIATGNLISMSEQQVLDCTGGTSSCKSGYVNAALTYITASGGLQTEA 219

Query: 202 VYPYQRREGYC---NWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGFR 258
            Y Y   +G C        +  A  +     +   E AL+  V+ QPV+VA++A  P F 
Sbjct: 220 AYAYSAEQGACRSGGASPNSAAAVGVHRSAMLNGDEGALQVLVAGQPVAVAVEA-EPDFH 278

Query: 259 YYSGGVFAG--PCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRDVGG 315
           +Y  GV+ G   CG  L+HAVT+VGYG+  +G  YW++KN WG  WGE G++R+ R  GG
Sbjct: 279 HYKSGVYVGSPSCGQKLHHAVTVVGYGADGDGQGYWVVKNQWGAGWGEVGYMRLTRGNGG 338

Query: 316 AGLCGIARKASYPI 329
              CG+A  A YP 
Sbjct: 339 NN-CGMATHAYYPT 351


>gi|255540425|ref|XP_002511277.1| cysteine protease, putative [Ricinus communis]
 gi|46395620|sp|O65039.1|CYSEP_RICCO RecName: Full=Vignain; AltName: Full=Cysteine endopeptidase; Flags:
           Precursor
 gi|2944446|gb|AAC62396.1| cysteine endopeptidase precursor [Ricinus communis]
 gi|223550392|gb|EEF51879.1| cysteine protease, putative [Ricinus communis]
          Length = 360

 Score =  262 bits (670), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 137/293 (46%), Positives = 187/293 (63%), Gaps = 8/293 (2%)

Query: 42  EKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQS 101
           EK  RF +FK N   +   N+  ++ YKL LN+FAD+T+ EF  +++G K+    +  + 
Sbjct: 53  EKQKRFNVFKHNAMHVHNANKM-DKPYKLKLNKFADMTNHEFRNTYSGSKVKHHRMF-RG 110

Query: 102 QSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGR 161
               N  F Y +    +P S+DWR +GAVT VK+QG CG CW FS + AVEGI +I+T +
Sbjct: 111 GPRGNGTFMY-EKVDTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNK 169

Query: 162 LISLSEQQVLDCSG--SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAM 219
           L+SLSEQ+++DC    ++GC GG MD AF +I +  G+T E  YPY+  +G C+  +   
Sbjct: 170 LVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKENA 229

Query: 220 KAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVT 278
            A  I  +++VP   E AL  AV+ QPVSVAIDA    F++YS GVF G CG  L+H V 
Sbjct: 230 PAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTELDHGVA 289

Query: 279 IVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
           IVGYG++ +G  YW +KNSWG  WGE G+IRM R +    GLCGIA +ASYPI
Sbjct: 290 IVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPI 342


>gi|326507362|dbj|BAK03074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 473

 Score =  262 bits (670), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 136/322 (42%), Positives = 197/322 (61%), Gaps = 15/322 (4%)

Query: 19  EDSISAKHELWMAQ----SARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLS 71
           E    A ++LW+A+    S+    + A++  RF  F  N RF++  N     G + ++L+
Sbjct: 45  EAEARAVYDLWLAEHGGGSSPNANSIADRERRFSAFWDNLRFVDAHNARAAAGEEGFRLA 104

Query: 72  LNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVT 131
           +N FADLT++EF A++ G K       N++       + + D    LP ++DWR +GAV 
Sbjct: 105 MNRFADLTNDEFRAAYLGVKGAAER--NRAGRVVGERYRH-DGAEELPEAVDWREKGAVA 161

Query: 132 PVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAF 188
           PVKNQG CG CW FSAV+ VE I +I TG +++LSEQ++++C     S GC GG MDDAF
Sbjct: 162 PVKNQGQCGSCWAFSAVSTVESINQIVTGEMVTLSEQELVECDINGQSSGCNGGLMDDAF 221

Query: 189 SYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVS 247
            +II++ G+  E  YPY+  +G C+  R   K   I  ++DVP   E +L+ AV+  PVS
Sbjct: 222 EFIIKNGGIDTEDDYPYKAVDGRCDVLRKNAKVVSIDGFEDVPENDEKSLQKAVAHHPVS 281

Query: 248 VAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFI 307
           VAI+A    F+ Y  GVF+G CG  L+H V  VGYG+ N   YW+++NSWG NWGE G++
Sbjct: 282 VAIEAGGREFQLYHSGVFSGRCGTQLDHGVVAVGYGTENGKDYWIVRNSWGPNWGEAGYL 341

Query: 308 RMRRDVG-GAGLCGIARKASYP 328
           RM R++   +G CGIA  +SYP
Sbjct: 342 RMERNINVTSGKCGIAMMSSYP 363


>gi|204307508|gb|ACI00280.1| triticain beta 2 [Hordeum vulgare]
          Length = 473

 Score =  262 bits (670), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 136/322 (42%), Positives = 197/322 (61%), Gaps = 15/322 (4%)

Query: 19  EDSISAKHELWMAQ----SARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLS 71
           E    A ++LW+A+    S+    + A++  RF  F  N RF++  N     G + ++L+
Sbjct: 45  EAEARAVYDLWLAEHGGGSSPNANSIADRERRFSAFWDNLRFVDAHNARAAAGEEGFRLA 104

Query: 72  LNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVT 131
           +N FADLT++EF A++ G K       N++       + + D    LP ++DWR +GAV 
Sbjct: 105 MNRFADLTNDEFRAAYLGVKGAAER--NRAGRVVGERYRH-DGAEELPEAVDWREKGAVA 161

Query: 132 PVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAF 188
           PVKNQG CG CW FSAV+ VE I +I TG +++LSEQ++++C     S GC GG MDDAF
Sbjct: 162 PVKNQGQCGSCWAFSAVSTVESINQIVTGEMVTLSEQELVECDINGQSSGCNGGLMDDAF 221

Query: 189 SYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVS 247
            +II++ G+  E  YPY+  +G C+  R   K   I  ++DVP   E +L+ AV+  PVS
Sbjct: 222 EFIIKNGGIDTEDDYPYKAVDGRCDVLRKNAKVVSIDGFEDVPENDEKSLQKAVAHHPVS 281

Query: 248 VAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFI 307
           VAI+A    F+ Y  GVF+G CG  L+H V  VGYG+ N   YW+++NSWG NWGE G++
Sbjct: 282 VAIEAGGREFQLYHSGVFSGRCGTQLDHGVVAVGYGTENGKDYWIVRNSWGPNWGEAGYL 341

Query: 308 RMRRDVG-GAGLCGIARKASYP 328
           RM R++   +G CGIA  +SYP
Sbjct: 342 RMERNINVTSGKCGIAMMSSYP 363


>gi|302142276|emb|CBI19479.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 183/311 (58%), Gaps = 42/311 (13%)

Query: 24  AKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEF 83
           A +E W+A+  ++Y    EK  RF+IFK N RFI++ N E N+TYK+S            
Sbjct: 2   AVYEAWLAKHGKSYNALGEKERRFQIFKDNLRFIDEHNAE-NRTYKIS------------ 48

Query: 84  IASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCW 143
                               YA   F   DS   LP S+DWR +GAV  VK+QGSCG CW
Sbjct: 49  ------------------DRYA---FRVGDS---LPESVDWRKKGAVVEVKDQGSCGSCW 84

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDER 201
            FS +AAVEGI KI TG LISLSEQ+++DC  S   GC GG MD AF +II + G+  E 
Sbjct: 85  AFSTIAAVEGINKIVTGGLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIINNGGIDSEE 144

Query: 202 VYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYY 260
            YPY+  +G C+  R   K   I  Y+DVP   E +L  AV+ QPVSVAI+A    F+ Y
Sbjct: 145 DYPYKASDGRCDQYRKNAKVVTIDGYEDVPENDEKSLEKAVANQPVSVAIEAGGREFQLY 204

Query: 261 SGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG--GAGL 318
             G+F G CG  L+H VT VGYG+ N   YW++KNSWG +WGE G+IRM RD+     G 
Sbjct: 205 QSGIFTGRCGTALDHGVTAVGYGTENGVDYWIVKNSWGASWGEEGYIRMERDLATSATGK 264

Query: 319 CGIARKASYPI 329
           CGIA +ASYPI
Sbjct: 265 CGIAMEASYPI 275


>gi|30141023|dbj|BAC75925.1| cysteine protease-3 [Helianthus annuus]
          Length = 348

 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 139/333 (41%), Positives = 196/333 (58%), Gaps = 10/333 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           + I +V            + S+   +E W +Q   + +   EK  RF +FK N   I + 
Sbjct: 15  LFIGVVNCIDFTEKDLATDKSLWDLYERWGSQHMVS-RAPDEKKKRFNVFKYNVNHINRV 73

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N+ G + YKL LNEFAD+T+ EF A      +  R +  + +          D     P 
Sbjct: 74  NQLG-KPYKLKLNEFADMTNHEFKAGFDSKILHFRMLKGKRRQTPFTHAKTTDP----PP 128

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGC 179
           SIDWR  GAV P+KNQG CG CW FS +  VEGI KI+T +L+SLSEQ+++DC +   GC
Sbjct: 129 SIDWRTNGAVNPIKNQGRCGSCWAFSTIVGVEGINKIKTNQLVSLSEQELVDCETDCEGC 188

Query: 180 YGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALR 238
            GG M++ + +I  + G+T E++YPY  R G C+  +      +I  +++VP + E A+ 
Sbjct: 189 NGGLMENGYEFIKETGGVTTEQIYPYFARNGRCDISKRNSPVVKIDGFENVPANDESAML 248

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSW 297
            AV+ QPVS+AIDA    F++YS GVF G CG  LNH V IVGYG++ +G  YW+++NSW
Sbjct: 249 RAVANQPVSIAIDAGGLNFQFYSQGVFNGACGTELNHGVAIVGYGTTQDGTNYWIVRNSW 308

Query: 298 GQNWGEGGFIRMRRDVG-GAGLCGIARKASYPI 329
           G  WGE G++RM+R V    GLCG+A  ASYPI
Sbjct: 309 GTGWGEQGYVRMQRGVNVPEGLCGLAMDASYPI 341


>gi|242093944|ref|XP_002437462.1| hypothetical protein SORBIDRAFT_10g027570 [Sorghum bicolor]
 gi|241915685|gb|EER88829.1| hypothetical protein SORBIDRAFT_10g027570 [Sorghum bicolor]
          Length = 366

 Score =  261 bits (668), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 149/328 (45%), Positives = 196/328 (59%), Gaps = 21/328 (6%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           E+S+ A +E W A      ++  EK  RF +FK+N R I + N +GN TY L LN F+D+
Sbjct: 41  EESLWALYERWCAHY-NMARDHGEKTRRFDLFKENARRIYEHNHQGNATYTLGLNRFSDM 99

Query: 79  TDEEFIASHTGYKMPTRNISN-------------QSQSYANNWFGYPDSRRGLPRSIDWR 125
           TDEEF  S  G  +    +S+             +     N   G    + G P ++DWR
Sbjct: 100 TDEEFNRSPYGGCLTAPRMSDDEIEELHHHHHQQEDDGSFNLTHGSGGGKLGAPPAVDWR 159

Query: 126 ARGAVTPVKNQG-SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGW 183
            R AVT VK+QG +CG CW FSA+AAVEGI  IRT  L+ LSEQQ++DC   + GC GG 
Sbjct: 160 GR-AVTRVKDQGPTCGSCWAFSAIAAVEGINAIRTRNLVPLSEQQLVDCDKLNHGCNGGL 218

Query: 184 MDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSEL-ALRYAVS 242
           M  AFS+++R++G+  E  YPY  REG C  +        I  YQ VP  +  AL  AV+
Sbjct: 219 MTTAFSFVVRNRGVVPEGAYPYMGREGRC--KHVMAPPVTIYGYQRVPRFDANALMNAVA 276

Query: 243 RQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
            QPVSVAI+ASS  FR+Y GGVF G CG  L HA T VGYG+   GP+W++KNSWG  WG
Sbjct: 277 AQPVSVAIEASSFEFRHYQGGVFNGNCGGRLGHAATAVGYGADAGGPFWIVKNSWGPGWG 336

Query: 303 EGGFIRMRRDVG-GAGLCGIARKASYPI 329
           EGG++R+ R+     G+CGI  + SYP+
Sbjct: 337 EGGYVRISRNTPVRQGVCGILTENSYPV 364


>gi|168063167|ref|XP_001783545.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664932|gb|EDQ51634.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  261 bits (668), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 141/327 (43%), Positives = 199/327 (60%), Gaps = 17/327 (5%)

Query: 11  LVMSRTL-HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYK 69
           L M+  L HE+ +  +   W  +  + Y +  +   RF ++K N  +I   + E N+TY 
Sbjct: 38  LHMTTDLEHENLLLEQFAAWAHKHGKAYHDAEQCLHRFAVWKDNLAYIR--HSETNRTYS 95

Query: 70  LSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGA 129
           L L +FADLT+EEF   +TG +     I    ++     F Y DS    P S+DWR  GA
Sbjct: 96  LGLTKFADLTNEEFRRMYTGTR-----IDRSRRAKRRTGFRYADSE--APESVDWRKNGA 148

Query: 130 VTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDA 187
           VT VK+QGSCG CW FSAV +VEGI  IR G  +SLSEQ+++DC    ++GC GG MD A
Sbjct: 149 VTSVKDQGSCGSCWAFSAVGSVEGINAIRNGEAVSLSEQELVDCDLEYNQGCNGGLMDYA 208

Query: 188 FSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPV 246
           F +II++ G+  E+ YPY+  +G C+  +       I  Y+DVP   E AL+ AV+ QPV
Sbjct: 209 FDFIIQNGGIDTEKDYPYKGFDGRCDNSKKNAHVVTIDGYEDVPENDEEALKKAVAGQPV 268

Query: 247 SVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGF 306
           SVAI+A    F+ Y+ GVF+G CG +L+H V  VGYG+ +   YW++KNSWG+ WGE G+
Sbjct: 269 SVAIEAGGRDFQLYAQGVFSGECGTDLDHGVLAVGYGTEDGVDYWIVKNSWGEYWGESGY 328

Query: 307 IRMRRDV----GGAGLCGIARKASYPI 329
           +RM+R++     G GLCGI  + SY +
Sbjct: 329 LRMKRNMKDSNDGPGLCGINIEPSYAV 355


>gi|115468686|ref|NP_001057942.1| Os06g0582600 [Oryza sativa Japonica Group]
 gi|55296512|dbj|BAD68726.1| putative cysteine proteinase [Oryza sativa Japonica Group]
 gi|113595982|dbj|BAF19856.1| Os06g0582600 [Oryza sativa Japonica Group]
 gi|215695236|dbj|BAG90427.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 357

 Score =  261 bits (668), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 150/324 (46%), Positives = 198/324 (61%), Gaps = 20/324 (6%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREG-NQTYKLSLNEFAD 77
           + ++  ++E W A   RTYK+  EKA RF++F+ N  FI+ FN  G  ++ +L+ N+FAD
Sbjct: 42  DSAMRERYEKWAADHGRTYKDSLEKARRFEVFRTNALFIDSFNAAGGKKSPRLTTNKFAD 101

Query: 78  LTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQG 137
           LT+EEF A + G    T  I      Y N           +P +I+WR RGAVT VKNQ 
Sbjct: 102 LTNEEF-AEYYGRPFSTPVIGGSGFMYGNV------RTSDVPANINWRDRGAVTQVKNQK 154

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR---GCYGGWMDDAFSYIIRS 194
            C  CW FSAVAAVEGI +IR+  L++LS QQ+LDCS  R   GC  G MD+AF YI  +
Sbjct: 155 DCASCWAFSAVAAVEGIHQIRSHNLVALSTQQLLDCSTGRNNHGCNRGDMDEAFRYITSN 214

Query: 195 QGLTDERVYPYQRRE-GYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDA 252
            G+  E  YPY+ R  G C    G   AA IR +Q V P +E AL  AV+ QPVSVA+D 
Sbjct: 215 GGIAAESDYPYEDRALGTCR-ASGKPVAASIRGFQYVPPNNETALLLAVAHQPVSVALDG 273

Query: 253 SSPGFRYYSGGVFAG----PCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFI 307
                +++S GVF       C  +LNHA+T VGYG+   G  YWL+KNSWG +WGEGG++
Sbjct: 274 VGKVSQFFSSGVFGAMQNETCTTDLNHAMTAVGYGTDEHGTKYWLMKNSWGTDWGEGGYM 333

Query: 308 RMRRDVG-GAGLCGIARKASYPIA 330
           ++ RDV    GLCG+A + SYP+A
Sbjct: 334 KIARDVASNTGLCGLAMQPSYPVA 357


>gi|242094000|ref|XP_002437490.1| hypothetical protein SORBIDRAFT_10g028000 [Sorghum bicolor]
 gi|241915713|gb|EER88857.1| hypothetical protein SORBIDRAFT_10g028000 [Sorghum bicolor]
          Length = 372

 Score =  261 bits (666), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 143/320 (44%), Positives = 194/320 (60%), Gaps = 17/320 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEF 75
           +D +   +E W  +S   + + ++  +R ++F+ N R+I+  N E   G  T++L L  F
Sbjct: 45  DDEVRRMYEAW--KSEHGHGHGSDDRLRLEVFRDNLRYIDAHNAEADAGLHTFRLGLTPF 102

Query: 76  ADLTDEEFIASHTGYKMPTRNIS--NQSQSYANNWFGYPDSRRG-LPRSIDWRARGAVTP 132
           ADLT EE+     G++      S      SY       P  R G LP +IDWR  GAVT 
Sbjct: 103 ADLTLEEYRGRALGFRARRGGASRVGSGSSY------RPRPRGGDLPDAIDWRELGAVTG 156

Query: 133 VKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYI 191
           VKNQ  CG CW FSAVAA+EGI +I TG L+SLSEQ+++DC +   GC GG M +AF ++
Sbjct: 157 VKNQEQCGGCWAFSAVAAIEGINEIVTGNLVSLSEQEIIDCDTQDGGCNGGEMQNAFQFV 216

Query: 192 IRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAI 250
           I + G+  E  YPY   +  C+  R   +   I  +  V T +E AL+ AV+ QPVSVAI
Sbjct: 217 INNGGIDTEADYPYLGTDAACDANRVNERVVTIDGFVSVATENETALQEAVANQPVSVAI 276

Query: 251 DASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMR 310
           DAS   F++Y+ G+F GPCG  L+H VT VGYGS N   YW++KNSW  +WGE G+IR+R
Sbjct: 277 DASGRKFQHYTSGIFNGPCGTQLDHGVTAVGYGSENGKDYWIVKNSWSSSWGEAGYIRIR 336

Query: 311 RDVGGA-GLCGIARKASYPI 329
           R+V  A G CGIA  ASYP+
Sbjct: 337 RNVAAATGKCGIAMDASYPV 356


>gi|356515062|ref|XP_003526220.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
          Length = 337

 Score =  261 bits (666), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 138/336 (41%), Positives = 200/336 (59%), Gaps = 13/336 (3%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
            L+  +   +  +S +    S+S  HE WMAQ  + YK+ AEK    +IF+ N  FIE F
Sbjct: 9   FLVAFIEVDACSLSESCCSHSLS--HEKWMAQHGKVYKDAAEKERCLQIFENNMEFIESF 66

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           +  G++++ LS N+FADL DEEF A  T       ++   +++     F Y D+   +P 
Sbjct: 67  DVCGDKSFNLSTNQFADLHDEEFKALLTNGHKKEHSLWTTTETL----FRY-DNVTKIPA 121

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFS-AVAAVEGITKIRTGRLISLSEQQVLDC--SGSR 177
           S+DWR RG VTP+K+QG C  CW FS  VA +EG+ +I T  L+ LSEQ+++D     S 
Sbjct: 122 SMDWRKRGVVTPIKDQGKCLSCWAFSLCVATIEGLHQIITSELVPLSEQELVDFVKGESE 181

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GCYG +++DAF +I +   +  E  YPY+     C  ++     A+I+ Y+ VP+ SE A
Sbjct: 182 GCYGDYVEDAFKFITKKGRIESETHYPYKGVNNTCKVKKETHGVAQIKGYKKVPSKSENA 241

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKN 295
           L  AV+ Q VSV+++A    F++YS G+F G CG + +H V +  YG S +G  YWL KN
Sbjct: 242 LLKAVANQLVSVSVEARDSAFQFYSSGIFTGKCGTDTDHRVALASYGESGDGTKYWLAKN 301

Query: 296 SWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPIA 330
           SWG  WGE G+IR++ D+    GLCGIA+   YPIA
Sbjct: 302 SWGTEWGEKGYIRIKXDIPAKEGLCGIAKYPYYPIA 337


>gi|242055753|ref|XP_002457022.1| hypothetical protein SORBIDRAFT_03g047290 [Sorghum bicolor]
 gi|241928997|gb|EES02142.1| hypothetical protein SORBIDRAFT_03g047290 [Sorghum bicolor]
          Length = 378

 Score =  261 bits (666), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 154/339 (45%), Positives = 206/339 (60%), Gaps = 33/339 (9%)

Query: 19  EDSISAKHELWMAQSAR-TYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFAD 77
            +S++   E W+++  +  Y +  EK  RF++FK N   I++ NR+   +Y L LNEFAD
Sbjct: 41  HESLAELFERWLSRHRKGAYASLEEKLRRFEVFKDNLHHIDETNRK-VSSYWLGLNEFAD 99

Query: 78  LTDEEFIAS--------------HTGYKMPTRNISNQSQSYANNW-FGYP--DSRRGLPR 120
           LT +EF A+              H  +         +  S ++++ F Y   D+ R LP+
Sbjct: 100 LTHDEFKATYLGLSPSGGGGDVVHMHHDDDDEEPEEEGSSSSSSFRFRYEGVDAAR-LPK 158

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRG 178
           S+DWR++GAVT VKNQG CG CW FS VAAVEGI +I TG L +LSEQ+++DC   G+ G
Sbjct: 159 SVDWRSKGAVTGVKNQGQCGSCWAFSTVAAVEGINQIVTGNLTALSEQELVDCDTDGNNG 218

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKA-ARIRSYQDVP-TSELA 236
           C GG MD AFSYI  + GL  E  YPY   EG C+  RG+  A   I  Y+DVP  +E A
Sbjct: 219 CNGGLMDYAFSYIAHNGGLHTEEAYPYLMEEGTCS--RGSSAAVVTISGYEDVPRNNEQA 276

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNE------GPY 290
           L  A++ QPVSVAI+AS    ++YSGGVF GPCG  L+H V  VGYG++ +        Y
Sbjct: 277 LLKALAHQPVSVAIEASGRNLQFYSGGVFDGPCGTQLDHGVAAVGYGTAGKDNGHVVADY 336

Query: 291 WLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
            ++KNSWG +WGE G+IRMRR  G   GLCGI +  SYP
Sbjct: 337 IIVKNSWGPSWGEKGYIRMRRGTGKRQGLCGINKMPSYP 375


>gi|386648114|gb|AFJ15104.1| mexicain-like cystein protease, partial [Jacaratia mexicana]
          Length = 323

 Score =  261 bits (666), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 137/305 (44%), Positives = 187/305 (61%), Gaps = 13/305 (4%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           E W  ++ + YKN  EK  RF+IFK N  +I++ N++ N +Y L LNEFADLT +EF A 
Sbjct: 23  ESWTLENDKIYKNIDEKIYRFEIFKDNLMYIDETNKK-NSSYWLGLNEFADLTHDEFKAK 81

Query: 87  HTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFS 146
           + G       I  QS      +    D     P SIDWR +GAVTPVKNQ  CG CW FS
Sbjct: 82  YVGSLGEDSTIIEQSDDEEFPYKHVVD----YPESIDWRQKGAVTPVKNQNPCGSCWAFS 137

Query: 147 AVAAVEGITKIRTGRLISLSEQQVLDCS-GSRGCYGGWMDDAFSYIIRSQGLTDERVYPY 205
            VA VEGI KI TG+LISLSEQ++LDC   S GC GG+   +  Y+    G+  E+ YPY
Sbjct: 138 TVATVEGINKIVTGKLISLSEQELLDCDRRSHGCKGGYQTTSLQYVA-DNGVHTEKEYPY 196

Query: 206 QRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGV 264
           ++++G C  +       +I  Y+ VP  +E++L  A++ QPVSV +++    F++Y GG+
Sbjct: 197 EKKQGKCRAKDKKGSKVKITGYKRVPANNEVSLIQAIANQPVSVVVESKGRAFQFYKGGI 256

Query: 265 FAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIAR 323
           F GPCG  ++HAVT VGYG +    Y LIKNSWG  WGE G+IR++R  G + G CG+  
Sbjct: 257 FEGPCGTKVDHAVTAVGYGKN----YILIKNSWGPKWGEKGYIRIKRASGKSKGTCGVYS 312

Query: 324 KASYP 328
            + +P
Sbjct: 313 SSYFP 317


>gi|326497561|dbj|BAK05870.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 340

 Score =  260 bits (664), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 140/307 (45%), Positives = 187/307 (60%), Gaps = 23/307 (7%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIA--- 85
           W A   R+Y +  E+  RF++++ N  +I+  NR G  TY+L  N+FADLT EEF+A   
Sbjct: 48  WQATHNRSYLSAEERLRRFEVYRTNVEYIDATNRRGGLTYELGENQFADLTGEEFLARYA 107

Query: 86  -SHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS-CGCCW 143
             HTG  + T   ++ S                 P S+DWRA+GAVTPVKNQGS C  CW
Sbjct: 108 GGHTGSAITTAAEADGSL------------EADPPASVDWRAKGAVTPVKNQGSQCYSCW 155

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQGLTDERV 202
            FSAVA +E +  I+TG+L++LSEQQ++DC     GC  G+   AF +I+ + G+T    
Sbjct: 156 AFSAVATMESLYFIKTGKLVALSEQQLVDCDKYDGGCNKGYYHRAFQWIMENGGITTAAQ 215

Query: 203 YPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGFRYYSG 262
           YPY+   G C+    A  A  I  +  V  +ELAL+ AV+RQP+ VAI+      ++Y  
Sbjct: 216 YPYKAVRGACS---AAKPAVTITGHLAVAKNELALQSAVARQPIGVAIEVPIS-MQFYKS 271

Query: 263 GVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGI 321
           GVF+  CG  ++HAV  VGYG+   G  YWL+KNSWGQ WGE G+IRMRRDVGG GLCGI
Sbjct: 272 GVFSAACGIQMSHAVVTVGYGADASGLKYWLVKNSWGQTWGEAGYIRMRRDVGGGGLCGI 331

Query: 322 ARKASYP 328
           A   +YP
Sbjct: 332 ALDTAYP 338


>gi|359359118|gb|AEV41024.1| putative oryzain beta chain precursor [Oryza minuta]
          Length = 493

 Score =  259 bits (662), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/349 (39%), Positives = 199/349 (57%), Gaps = 46/349 (13%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQT--YKLSLNEFA 76
           E    A ++LW+A++ R+Y    E+  RF++F  N +F++  N   ++   ++L +N FA
Sbjct: 42  EAEARAAYDLWLAENGRSYNALGERERRFRVFWDNLKFVDAHNARADEHGGFRLGMNRFA 101

Query: 77  DLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQ 136
           DLT++EF A+  G K   R+ +   + Y +      D    LP S+DWR +GAV PVKNQ
Sbjct: 102 DLTNDEFRATFLGAKFVERSRA-AGERYRH------DGVEELPESVDWREKGAVAPVKNQ 154

Query: 137 GSC--------------------------------GCCWIFSAVAAVEGITKIRTGRLIS 164
           G C                                G CW FSAV+ VE I ++ TG +I+
Sbjct: 155 GQCVDRIIVWNSMVRIYVVDAGCMLENPLMGLTVQGSCWAFSAVSTVESINQLVTGEMIT 214

Query: 165 LSEQQVLDCSGS---RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKA 221
           LSEQ++++CS +    GC GG MDDAF +II++ G+  E  YPY+  +G C+  R   K 
Sbjct: 215 LSEQELVECSTNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGKCDINRENAKV 274

Query: 222 ARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIV 280
             I  ++DVP   E +L+ AV+ QPVSVAI+A    F+ Y  GVF+G CG +L+H V  V
Sbjct: 275 VSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGRCGTSLDHGVVAV 334

Query: 281 GYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           GYG+ N   YW+++NSWG  WGE G++RM R++    G CGIA  ASYP
Sbjct: 335 GYGTDNGKDYWIVRNSWGPKWGESGYVRMERNINATTGKCGIAMMASYP 383


>gi|357162587|ref|XP_003579458.1| PREDICTED: oryzain beta chain-like [Brachypodium distachyon]
          Length = 470

 Score =  259 bits (662), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 192/322 (59%), Gaps = 18/322 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQ-AEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNE 74
           E    A + LW A+      N   E+  RF+ F  N RF++  N     G + ++L +N 
Sbjct: 45  EAEARAIYGLWRAEHGSGNSNSLGEEERRFRAFWDNLRFVDAHNARAAAGEEGFRLGMNR 104

Query: 75  FADLTDEEFIASHTGYKMPTRNISNQS---QSYANNWFGYPDSRRGLPRSIDWRARGAVT 131
           FADLT++EF A++ G K   +  S ++   + Y +      D    LP ++DWR +GAV 
Sbjct: 105 FADLTNDEFRAAYLGVKGAGQRRSARAGVGERYRH------DGVEELPEAVDWREKGAVA 158

Query: 132 PVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAF 188
           PVKNQG CG CW FSAV+AVE I ++ TG L++LSEQ++++C     S GC GG MDDAF
Sbjct: 159 PVKNQGQCGSCWAFSAVSAVESINQLVTGELVTLSEQELVECDINGQSNGCNGGLMDDAF 218

Query: 189 SYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVS 247
            +II + G+  E  YPY+  +G C+  R   K   I  ++DVP   E +L+ AV+ QPVS
Sbjct: 219 DFIINNGGIDTEDDYPYKALDGKCDINRRNAKVVSIDGFEDVPENDEKSLQKAVAHQPVS 278

Query: 248 VAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFI 307
           VAI+A    F+ Y  GVF G CG  L+H V  VGYG+ N   YW+++NSWG  WGE G++
Sbjct: 279 VAIEAGGREFQLYHSGVFTGRCGTELDHGVVAVGYGTENGKDYWIVRNSWGPKWGEAGYL 338

Query: 308 RMRRDVGG-AGLCGIARKASYP 328
           RM R++    G CGIA  +SYP
Sbjct: 339 RMERNINATTGKCGIAMMSSYP 360


>gi|222641485|gb|EEE69617.1| hypothetical protein OsJ_29194 [Oryza sativa Japonica Group]
          Length = 360

 Score =  259 bits (661), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/300 (46%), Positives = 188/300 (62%), Gaps = 13/300 (4%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           W     R+Y +  E   RF ++++N  FI+  N  G+ TY+L+ NEFADLT+EEF+A++T
Sbjct: 54  WQGAHNRSYPSAEEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEEEFLATYT 113

Query: 89  GYKM---PTRN-ISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS-CGCCW 143
           GY     P  + +        +  F Y   R  +P S+DWRA+GAV P K+Q S C  CW
Sbjct: 114 GYYAGDGPVDDSVITTGAGDVDASFSY---RVDVPASVDWRAQGAVVPPKSQTSTCSSCW 170

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYIIRSQGLTDERV 202
            F   A +E +  I+TG+L+SLSEQQ++DC S   GC  G    A+ +++ + GLT E  
Sbjct: 171 AFVTAATIESLNMIKTGKLVSLSEQQLVDCDSYDGGCNLGSYGRAYKWVVENGGLTTEAD 230

Query: 203 YPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYS 261
           YPY  R G CN  + A  AA+I  +  VP  +E AL+ AV+RQPV+VAI+  S G ++Y 
Sbjct: 231 YPYTARRGPCNRAKSAHHAAKITGFGKVPPRNEAALQAAVARQPVAVAIEVGS-GMQFYK 289

Query: 262 GGVFAGPCGNNLNHAVTIVGYGS--SNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLC 319
           GGV+ GPCG  L HAVT+VGYG+  S+   YW IKNSWGQ+WGE G+IR+ RDVGG   C
Sbjct: 290 GGVYTGPCGTRLAHAVTVVGYGTDASSGAKYWTIKNSWGQSWGERGYIRILRDVGGPRPC 349


>gi|326520387|dbj|BAK07452.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 349

 Score =  259 bits (661), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 142/311 (45%), Positives = 190/311 (61%), Gaps = 22/311 (7%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIA--- 85
           W A   R+Y +  E+  RF++++ N  +I+  NR G  TY+L  N+FADLT EEF+A   
Sbjct: 48  WQATHNRSYLSAEERLRRFEVYRTNVEYIDATNRRGGLTYELGENQFADLTGEEFLARYA 107

Query: 86  -SHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL----PRSIDWRARGAVTPVKNQGS-C 139
             HTG  + T        + A+  +    S   L    P S+DWRA+GAVTPVKNQGS C
Sbjct: 108 GGHTGSAITT-------AAEADGLWSSGGSDGSLEADPPASVDWRAKGAVTPVKNQGSQC 160

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQGLT 198
             CW FSAVA +E +  I+TG+L++LSEQQ++DC     GC  G+   AF +I+ + G+T
Sbjct: 161 YSCWAFSAVATMESLYFIKTGKLVALSEQQLVDCDKYDGGCNKGYYHRAFQWIMENGGIT 220

Query: 199 DERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGFR 258
               YPY+   G C+    A  A  I  +  V  +ELAL+ AV+RQP+ VAI+      +
Sbjct: 221 TAAQYPYKAVRGACS---AAKPAVTITGHLAVAKNELALQSAVARQPIGVAIEVPIS-MQ 276

Query: 259 YYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGGAG 317
           +Y  GVF+  CG  ++HAV  VGYG+   G  YWL+KNSWGQ WGE G+IRMRRDVGG G
Sbjct: 277 FYKSGVFSAACGIQMSHAVVTVGYGADASGLKYWLVKNSWGQTWGEAGYIRMRRDVGGGG 336

Query: 318 LCGIARKASYP 328
           LCGIA   +YP
Sbjct: 337 LCGIALDTAYP 347


>gi|255646088|gb|ACU23531.1| unknown [Glycine max]
          Length = 362

 Score =  258 bits (660), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 140/326 (42%), Positives = 198/326 (60%), Gaps = 13/326 (3%)

Query: 14  SRTLHEDSISAKHELW-MAQSARTYKNQA----EKAMRFKIFKKNFRFIEKFNREGNQTY 68
           S   H+  ++++   W + +  R+Y+  +    +K  RF +FK N   +   N+  ++ Y
Sbjct: 22  SFDFHDKDLASEESFWDLYERWRSYRTVSRSLGDKHKRFNVFKANVMHVHNTNKM-DKPY 80

Query: 69  KLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARG 128
           KL LN+FAD+T+ EF +++ G K+    +  Q     N  F Y +    +P S DWR  G
Sbjct: 81  KLKLNKFADMTNHEFRSTYAGSKVNHHRMF-QGTPRGNGTFMY-EKVGSVPPSADWRKNG 138

Query: 129 AVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR--GCYGGWMDD 186
           AVT VK+QG CG CW FS V AVEGI +I+T +L+SLSEQ+++DC   +  GC GG M+ 
Sbjct: 139 AVTGVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVSLSEQELVDCDTKKNAGCNGGLMES 198

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQP 245
           AF +I +  G+T E  YPY  ++G C+  +    A  I  +++VP + E AL  AV+ QP
Sbjct: 199 AFEFIKQKGGITTESNYPYTAQDGTCDASKANDLAVSIDGHENVPANDENALLKAVANQP 258

Query: 246 VSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEG 304
           VSVAIDA    F++Y  GVF G C   LNH V IVGYG++ +G  YW ++NSWG  WGE 
Sbjct: 259 VSVAIDAGGFDFQFYFEGVFTGDCSTELNHGVAIVGYGTTVDGTNYWTVRNSWGPEWGEQ 318

Query: 305 GFIRMRRDV-GGAGLCGIARKASYPI 329
           G+IRM+R +    GLCGIA  ASYPI
Sbjct: 319 GYIRMQRSIFKKEGLCGIAMMASYPI 344


>gi|356563155|ref|XP_003549830.1| PREDICTED: vignain-like [Glycine max]
          Length = 361

 Score =  258 bits (660), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 134/293 (45%), Positives = 188/293 (64%), Gaps = 9/293 (3%)

Query: 42  EKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQS 101
           EK  RF +FK N   +   N+  ++ YKL LN FAD+T+ EF + + G K+    +  + 
Sbjct: 55  EKHNRFNVFKGNVMHVHSSNKM-DKPYKLKLNRFADMTNHEFRSIYAGSKVNHHRMF-RG 112

Query: 102 QSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGR 161
               N  F Y +  R +P S+DWR +GAVT VK+QG CG CW FS + AVEGI +I+T +
Sbjct: 113 TPRGNGTFMYQNVDR-VPSSVDWRKKGAVTDVKDQGQCGSCWAFSTIVAVEGINQIKTHK 171

Query: 162 LISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAM 219
           L+ LSEQ+++DC  + ++GC GG M+ AF + I+  G+T    YPY+ ++G C+  +   
Sbjct: 172 LVPLSEQELVDCDTTQNQGCNGGLMESAFEF-IKQYGITTASNYPYEAKDGTCDASKVNE 230

Query: 220 KAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVT 278
            A  I  +++VP  +E AL  AV+ QPVSVAI+A    F++YS GVF G CG  L+H V 
Sbjct: 231 PAVSIDGHENVPVNNEAALLKAVAHQPVSVAIEAGGIDFQFYSEGVFTGNCGTALDHGVA 290

Query: 279 IVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPI 329
           IVGYG++ +G  YW +KNSWG  WGE G+IRM+R +    GLCGIA +ASYPI
Sbjct: 291 IVGYGTTQDGTKYWTVKNSWGSEWGEKGYIRMKRSISVKKGLCGIAMEASYPI 343


>gi|3688528|emb|CAA06243.1| pre-pro-TPE4A protein [Pisum sativum]
          Length = 360

 Score =  258 bits (659), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 143/320 (44%), Positives = 201/320 (62%), Gaps = 18/320 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           E S+   +E W +    T ++  EK  RF +FK N   +   N+  ++ YKL LN+FAD+
Sbjct: 33  EKSLWDLYERWRSHHTVT-RSLDEKHNRFNVFKANVMHVHNTNKL-DKPYKLKLNKFADM 90

Query: 79  TDEEF----IASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVK 134
           T+ EF      S   +    R +SN+     N  F Y ++ + +P SIDWR +GAVT VK
Sbjct: 91  TNYEFRRIYADSKVSHHRMFRGMSNE-----NGTFMY-ENVKNVPSSIDWRKKGAVTDVK 144

Query: 135 NQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYII 192
           +QG CG CW FS + AVEGI +I+T +L+SLSEQ+++DC   G+ GC GG M+ AF + I
Sbjct: 145 DQGQCGSCWAFSTIVAVEGINQIKTQKLVSLSEQELVDCDTGGNEGCNGGLMEYAFEF-I 203

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAID 251
           +  G+T E  YPY  ++G C+ ++       I  Y++VP  +E AL  A ++QPVSVAID
Sbjct: 204 KQNGITTESNYPYAAKDGTCDLKKEDKAEVSIDGYENVPINNEAALLKAAAKQPVSVAID 263

Query: 252 ASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYG-SSNEGPYWLIKNSWGQNWGEGGFIRMR 310
           A    F++YS GVF+G CG +LNH V +VGYG + +   YW++KNSWG  WGE G+IRM+
Sbjct: 264 AGGYNFQFYSEGVFSGHCGTDLNHGVAVVGYGVTQDRTKYWIVKNSWGSEWGEQGYIRMQ 323

Query: 311 RDVG-GAGLCGIARKASYPI 329
           R +    GLCGIA +ASYPI
Sbjct: 324 RGISHKEGLCGIAMEASYPI 343


>gi|384253406|gb|EIE26881.1| hypothetical protein COCSUDRAFT_21961 [Coccomyxa subellipsoidea
           C-169]
          Length = 481

 Score =  258 bits (659), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 136/306 (44%), Positives = 183/306 (59%), Gaps = 10/306 (3%)

Query: 29  WMAQSARTYKNQAEKAMR-FKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASH 87
           W+    + YK+  E+  R F ++  N  F+   N E + T+KL L  FADLT +E+    
Sbjct: 51  WVEHLQKAYKDNVEEYERKFSVWLDNLEFVHSHN-EKDSTFKLGLTNFADLTHDEYRQHA 109

Query: 88  TGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSA 147
            GY+   +     +       F Y D     P SIDWR +GAVT VKNQ  CG CW FS 
Sbjct: 110 LGYRPELKGTGLGTGKSTG--FQYADYE--APPSIDWRKKGAVTDVKNQQQCGSCWAFST 165

Query: 148 VAAVEGITKIRTGRLISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPY 205
             +VEG   I +G L+SLSEQ+++DC  +   GC+GG MD AFS+IIR+ G+  E+ Y Y
Sbjct: 166 TGSVEGANAIYSGELVSLSEQELVDCDVTQDHGCHGGLMDFAFSFIIRNGGIDTEKDYKY 225

Query: 206 QRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGV 264
           + ++G CN  +       I SY+DVP   E AL+ A + QP+SVAI+A    F+ Y+GGV
Sbjct: 226 KAQDGVCNIAKEKRHVVTIDSYEDVPPNDESALKKAAANQPISVAIEADQREFQLYAGGV 285

Query: 265 FAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV-GGAGLCGIAR 323
           F  PCG  L+H V +VGYGS N   YW++KNSWG  WG+ G+IR+ R +   AG CGIA 
Sbjct: 286 FDAPCGTALDHGVLVVGYGSDNGTDYWIVKNSWGDFWGDSGYIRLARGISNSAGQCGIAM 345

Query: 324 KASYPI 329
           +ASYPI
Sbjct: 346 QASYPI 351


>gi|242094002|ref|XP_002437491.1| hypothetical protein SORBIDRAFT_10g028010 [Sorghum bicolor]
 gi|241915714|gb|EER88858.1| hypothetical protein SORBIDRAFT_10g028010 [Sorghum bicolor]
          Length = 397

 Score =  258 bits (658), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 143/334 (42%), Positives = 198/334 (59%), Gaps = 25/334 (7%)

Query: 19  EDSISAKHELWMAQSARTYKN----QAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLS 71
           ++ +   +E W ++  R   N      E  +R ++F+ N R+I+  N E   G  T++L 
Sbjct: 47  DEEVRRMYEAWKSKHGRPRGNCDMAGDEDRLRLEVFRDNLRYIDAHNAEADAGLHTFRLG 106

Query: 72  LNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRR------------GLP 119
           L  FADLT EE+     G++   R+    S   A +  G   +R              LP
Sbjct: 107 LTPFADLTLEEYRGRALGFR--ARHRGGPSARAAASRVGSGGTRSHHRRPRPRPRCGDLP 164

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRG 178
            +IDWR  GAVT VKNQ  CG CW FSAVAA+EGI  I TG L+SLSEQ+++DC +   G
Sbjct: 165 DAIDWRQLGAVTDVKNQEQCGGCWAFSAVAAIEGINAIVTGNLVSLSEQEIIDCDTQDSG 224

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRG-AMKAARIRSYQDVPTS-ELA 236
           C GG M++AF ++I + G+  E  YP+   +G C+  +    K A I  + +V ++ E A
Sbjct: 225 CNGGQMENAFQFVIDNGGIDSEADYPFIATDGTCDANKANDEKVAAIDGFVEVASNNETA 284

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNS 296
           L+ AV+ QPVSVAIDA    F++YS G+F GPCG NL+H VT+VGYGS N   YW++KNS
Sbjct: 285 LQEAVAIQPVSVAIDAGGRAFQHYSSGIFNGPCGTNLDHGVTVVGYGSENGKAYWIVKNS 344

Query: 297 WGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPI 329
           W  +WGE G+IR+RR+V    G CGIA  ASYP+
Sbjct: 345 WSDSWGEAGYIRIRRNVFLPVGKCGIAMDASYPV 378


>gi|357166364|ref|XP_003580686.1| PREDICTED: oryzain alpha chain-like [Brachypodium distachyon]
          Length = 360

 Score =  257 bits (657), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 136/308 (44%), Positives = 191/308 (62%), Gaps = 12/308 (3%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEFADLTDEEFIA 85
           W AQ      N+ E   R++ F+ N R+I++ N     G  +++L LN FA LT+EE+ A
Sbjct: 46  WTAQHGSPITNEEEG--RYEAFRDNLRYIDEHNAAADAGIHSFRLGLNRFAGLTNEEYRA 103

Query: 86  SHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQG-SCGCCWI 144
           ++ G ++ +  + +  +  A   +   D    LP S+DWR +GAV  VK+QG SCG  W 
Sbjct: 104 AYLGLRLRSGAVGDLRKPSAR--YEAADGE-ALPESVDWREKGAVGKVKDQGRSCGSAWA 160

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERV 202
           FSA+AAVE I +I TG LISLSEQ+++DC  S   GC GG MDDAF +II + G+  +  
Sbjct: 161 FSAIAAVESINQIVTGELISLSEQELMDCDTSYNAGCDGGLMDDAFEFIISNGGIDTDED 220

Query: 203 YPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGFRYYSG 262
           YPY+ R   C+  +   KA  I  Y+D+  +E +L+ AVS QPVSVAI+A    F+ Y  
Sbjct: 221 YPYKARNDSCDANKRNRKAVTIDDYEDLRMNEKSLQKAVSNQPVSVAIEAGGRDFQLYKS 280

Query: 263 GVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG-GAGLCGI 321
           G+F G CG +L+HA TIVGYGS N   YW++K S+G +WGE G+ RM R++   +G CGI
Sbjct: 281 GIFTGTCGTDLDHATTIVGYGSENGTDYWIVKESYGTSWGESGYARMERNIKETSGKCGI 340

Query: 322 ARKASYPI 329
           A   SYP+
Sbjct: 341 AMLPSYPV 348


>gi|156124996|gb|ABU50816.1| Ale o 1 allergen [Aleuroglyphus ovatus]
          Length = 337

 Score =  257 bits (657), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 142/328 (43%), Positives = 201/328 (61%), Gaps = 20/328 (6%)

Query: 12  VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTY 68
           + S  L E  + A+ E + +   R Y +   +  R  IF+ N +FI + N +   G+ T+
Sbjct: 19  IPSMLLTEGELEAQFEQFKSTFGRVYPSPEIELHRKSIFRANLQFILRHNIDYFNGDSTF 78

Query: 69  KLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARG 128
            +S+N F DL++EEF A+  GY+     +S     +A+N          LP ++DW  +G
Sbjct: 79  SVSVNNFTDLSNEEFRATFNGYRRLAA-VSLADSVHADN------DVEALPATVDWTTKG 131

Query: 129 AVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMD 185
            VTP+KNQ  CG CW FSAVA++EG   ++TG+L+SLSEQ ++DCS   G  GC GGWMD
Sbjct: 132 VVTPIKNQQQCGSCWAFSAVASMEGQHALKTGKLVSLSEQNLVDCSAAEGDMGCSGGWMD 191

Query: 186 DAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAV-SR 243
            AF Y+I+++G+  E  YPY+  +  C ++R ++  A I S+ DV T  E AL+ AV S 
Sbjct: 192 YAFKYVIQNRGIDTEASYPYKAIDESCEFKRNSI-GATIHSFVDVKTGDESALQNAVASI 250

Query: 244 QPVSVAIDASSPGFRYYSGGVFAGP-CGNN-LNHAVTIVGYGSSNEGPYWLIKNSWGQNW 301
            P+SVAIDAS P F++YS GV+  P C    L+H VT VGYG+ N  PYW +KNSWG +W
Sbjct: 251 GPISVAIDASQPSFQFYSSGVYNEPDCSTEILDHGVTAVGYGTLNGVPYWKVKNSWGTSW 310

Query: 302 GEGGFIRMRRDVGGAGLCGIARKASYPI 329
           G+ G+I M R+      CGIA KASYP+
Sbjct: 311 GQKGYIFMSRN--KQNQCGIATKASYPV 336


>gi|242049716|ref|XP_002462602.1| hypothetical protein SORBIDRAFT_02g028840 [Sorghum bicolor]
 gi|241925979|gb|EER99123.1| hypothetical protein SORBIDRAFT_02g028840 [Sorghum bicolor]
          Length = 384

 Score =  257 bits (656), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 144/358 (40%), Positives = 197/358 (55%), Gaps = 48/358 (13%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +  + E WM +  R Y +  EK  R +++++N   +E FN   N  Y+L+ N+FADLT
Sbjct: 26  DPMLERFEQWMGRHGRLYADAGEKQRRLEVYRRNVALVETFNSMSNGGYRLADNKFADLT 85

Query: 80  DEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPDSRR---GLPRSIDWRARGAVTPV 133
           +EEF A   G+  P    R   + +        G    RR    LP+S+DWR +GAV PV
Sbjct: 86  NEEFRAKMLGFGRPPPHGRATGHTTTPGTVACIGSGLGRRYSDELPKSVDWREKGAVAPV 145

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYII 192
           KNQG CG CW FSAVAA+EGI +I+ G+L+SLSEQ+++DC + + GC GG+M  AF +++
Sbjct: 146 KNQGECGSCWAFSAVAAIEGINQIKNGKLVSLSEQELVDCDTKAIGCAGGYMSWAFEFVM 205

Query: 193 RSQGLTDERVYPYQRR----------------------------EGYCNWQRGAMKAARI 224
            + GLT ER YPYQ                               G C   +    A  I
Sbjct: 206 NNSGLTTERNYPYQGTYAHGNRKTHALPFDCTKGSSTCDSRAGMNGACQTPKLKESAVSI 265

Query: 225 RSYQDV-PTSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYG 283
             Y +V  +SE  L  A + QPVSVA+DA S  ++ Y GGVF GPC  +LNH VT+VGYG
Sbjct: 266 SGYVNVTASSEPDLLRAAAAQPVSVAVDAGSFVWQLYGGGVFTGPCTADLNHGVTVVGYG 325

Query: 284 SSNEGP-----------YWLIKNSWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPI 329
            +               YW++KNSWG  WG+ G+I M+R+    +GLCGIA   SYP+
Sbjct: 326 ETQRDTDGDGTGVPGQKYWIVKNSWGPEWGDAGYILMQREASVASGLCGIALLPSYPV 383


>gi|156124998|gb|ABU50817.1| Ale o 1 allergen [Aleuroglyphus ovatus]
          Length = 337

 Score =  256 bits (655), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 141/328 (42%), Positives = 200/328 (60%), Gaps = 20/328 (6%)

Query: 12  VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTY 68
           + S  L E  + A+ E + +   R Y +   +  R  IF+ N +FI + N +   G+ T+
Sbjct: 19  IPSMLLTEGELEAQFEQFKSTFGRVYPSPEIELHRKSIFRANLQFILRHNIDYFNGDSTF 78

Query: 69  KLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARG 128
            +S+N F DL++EEF A+  GY+     +S     +A+N          LP ++DW  +G
Sbjct: 79  SVSVNNFTDLSNEEFRATFNGYRRLAA-VSLADSVHADN------DVEALPATVDWTTKG 131

Query: 129 AVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMD 185
            VTP+KNQ  CG CW FSAVA++EG   ++TG+L+SLSEQ ++DCS   G  GC GGWMD
Sbjct: 132 VVTPIKNQQQCGSCWAFSAVASMEGQHALKTGKLVSLSEQNLVDCSAAEGDMGCSGGWMD 191

Query: 186 DAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAV-SR 243
            AF Y+I+++G+  E  YPY+  +  C ++R ++  A I S+ DV T  E AL+ AV S 
Sbjct: 192 YAFKYVIQNRGIDTEASYPYKAIDESCEFKRNSV-GATIHSFVDVKTGDESALQNAVASI 250

Query: 244 QPVSVAIDASSPGFRYYSGGVFAGP-CGNN-LNHAVTIVGYGSSNEGPYWLIKNSWGQNW 301
            P+SVAIDA+ P F++YS GV+  P C    L+H VT VGYG+ N  PYW +KNSWG +W
Sbjct: 251 GPISVAIDAAQPSFQFYSSGVYNEPDCSTEILDHGVTAVGYGTLNGAPYWKVKNSWGTSW 310

Query: 302 GEGGFIRMRRDVGGAGLCGIARKASYPI 329
           G  G+I M R+      CGIA KASYP+
Sbjct: 311 GRKGYIFMSRN--KQNQCGIATKASYPV 336


>gi|558563|emb|CAA57538.1| cysteine proteinase [Cicer arietinum]
          Length = 325

 Score =  256 bits (654), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 135/315 (42%), Positives = 190/315 (60%), Gaps = 22/315 (6%)

Query: 26  HELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIA 85
           +E W+ +  + Y    EK  RF+IFK N RFI++ N + N +YK+ LN+FAD+ +EE+  
Sbjct: 4   YEKWLVKHQKMYNGLGEKDTRFQIFKDNLRFIDEHNAQ-NYSYKVGLNKFADINNEEYRD 62

Query: 86  SHTGYK-------MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
            + G K       M T+ I+    +Y         +   +   +DWR +GAVT +K+QGS
Sbjct: 63  MYLGTKSDAKRRVMKTK-ITGHRITY---------NSVIVTVKVDWRLKGAVTHIKDQGS 112

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIRSQG 196
           CG CW FS +A VE I KI TG+ +SLSEQ+++DC  + + GC GG MD AF +IIR+ G
Sbjct: 113 CGSCWAFSTIATVEAINKIVTGKFVSLSEQELVDCDRAFNEGCNGGLMDYAFEFIIRNGG 172

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPG 256
           +  ++ YPY   E  C+  +   K   I  Y+DVP+   AL+ AV+ QPVSVAI      
Sbjct: 173 IDTDQDYPYNGFERKCDPTKKNAKVVSIDGYEDVPSYMNALKKAVAHQPVSVAIAGLGRA 232

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRM-RRDVGG 315
            + Y  GVF G CG +L+H V +VGYGS N   YWL++NSWG NWGE G+ ++  R+V  
Sbjct: 233 LQLYQSGVFTGKCGTDLDHGVVVVGYGSENGVDYWLVRNSWGTNWGEDGYFKIASRNVKS 292

Query: 316 A-GLCGIARKASYPI 329
               CGIA +ASYP+
Sbjct: 293 LYRKCGIAMEASYPV 307


>gi|312282059|dbj|BAJ33895.1| unnamed protein product [Thellungiella halophila]
          Length = 379

 Score =  256 bits (653), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 135/310 (43%), Positives = 188/310 (60%), Gaps = 14/310 (4%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIA- 85
           E W+ +  + Y + AEK  R  IFK N RFI   N E N  Y+L LN FADL+  E+   
Sbjct: 65  ESWIVKHGKVYDSVAEKERRLTIFKDNLRFITNRNSE-NLGYRLGLNRFADLSLHEYKEI 123

Query: 86  SHTGYKMPTRN--ISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCW 143
            H     P RN    + S  Y  +      +   LP+S+DWR  GAVT VK+QG C  CW
Sbjct: 124 CHGADPKPPRNHVFMSSSDRYKTS------AGDVLPKSVDWRNEGAVTEVKDQGHCRSCW 177

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQGLTDERV 202
            FS V AVEG+ KI TG L++LSEQ +++C+  + GC GG ++ A+ +I+ + GL  +  
Sbjct: 178 AFSTVGAVEGLNKIVTGELVTLSEQDLINCNKENNGCGGGKVETAYEFIVSNGGLGTDND 237

Query: 203 YPYQRREGYCNWQ-RGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYY 260
           YPY+   G C+ + +  +K   I  Y+++P + ELAL  AV+ QPV+  ID+SS  F+ Y
Sbjct: 238 YPYKAVNGACDGRLKENIKNVMIDGYENLPANDELALMKAVAHQPVTAVIDSSSREFQLY 297

Query: 261 SGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLC 319
             GVF G CG NLNH V +VGYG+ N   YW+++NSWG  WGE G+++M R++    GLC
Sbjct: 298 ESGVFDGRCGTNLNHGVVVVGYGTENGRNYWIVRNSWGNTWGEAGYMKMARNIANPRGLC 357

Query: 320 GIARKASYPI 329
           GIA + SYP+
Sbjct: 358 GIAMRVSYPL 367


>gi|641905|gb|AAC49406.1| cysteine proteinase [Zinnia violacea]
          Length = 342

 Score =  256 bits (653), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 136/293 (46%), Positives = 183/293 (62%), Gaps = 10/293 (3%)

Query: 30  MAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTG 89
           + + ++ Y++  EK  RF+IF  N + I++ N++ +  Y L LNEFADLT EEF     G
Sbjct: 53  LVKHSKIYESFDEKLHRFEIFMDNLKHIDETNKKVSN-YWLGLNEFADLTHEEFKNKFLG 111

Query: 90  YKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVA 149
           +K       ++S       F Y D    LP+S+DWR +GAV+PVKNQG CG CW FS VA
Sbjct: 112 FKGELAERKDESIE----QFRYRDFVD-LPKSVDWRKKGAVSPVKNQGQCGSCWAFSTVA 166

Query: 150 AVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDERVYPYQR 207
           AVEGI +I TG L  LSEQ+++DC  +   GC GG MD AF+Y+ R+ GL  E  YPY  
Sbjct: 167 AVEGINQIVTGNLTVLSEQELIDCDTTFNNGCNGGLMDYAFAYVTRN-GLHKEEEYPYIM 225

Query: 208 REGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFA 266
            EG C+ +R A +   I  Y DVP  +E +   A++ QP+SVAI+AS   F++YSGGVF 
Sbjct: 226 SEGTCDEKRDASEKVTISGYHDVPRNNEDSFLKALANQPISVAIEASGRDFQFYSGGVFD 285

Query: 267 GPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLC 319
           G CG  L+H V  VGYG+S    Y +++NSWG  WGE G+IRM+R+ G    C
Sbjct: 286 GHCGTELDHGVAAVGYGTSKGLDYVIVRNSWGPKWGEKGYIRMKRNTGKPMGC 338


>gi|297809385|ref|XP_002872576.1| hypothetical protein ARALYDRAFT_489965 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318413|gb|EFH48835.1| hypothetical protein ARALYDRAFT_489965 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 371

 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 135/308 (43%), Positives = 189/308 (61%), Gaps = 10/308 (3%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIA- 85
           E WM +  + Y++ AEK  R  IF+ N RFI   N E N +Y+L LN FADL+  E+   
Sbjct: 57  ESWMVKHGKVYESVAEKERRLTIFEDNLRFITNRNAE-NLSYRLGLNRFADLSLHEYAQI 115

Query: 86  SHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIF 145
            H     P RN    + S   N +   D    LP+S+DWR  GAVT VK+QG C  CW F
Sbjct: 116 CHGADPRPPRNHVFMTSS---NRYKTSDGDV-LPKSVDWRNEGAVTEVKDQGQCRSCWAF 171

Query: 146 SAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQGLTDERVYP 204
           S V AVEG+ KI TG L++LSEQ +++C+  + GC GG ++ A+ +I+ + GL  +  YP
Sbjct: 172 STVGAVEGLNKIVTGELVTLSEQDLINCNKENNGCGGGKVETAYEFIMNNGGLGTDNDYP 231

Query: 205 YQRREGYCNWQ-RGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYSG 262
           Y+   G CN + +   K   I  Y+++P + E AL  AV+ QPV+  +D+SS  F+ Y+ 
Sbjct: 232 YKALNGVCNDRLKENNKNVMIDGYENLPANDESALMKAVAHQPVTAVVDSSSREFQLYAS 291

Query: 263 GVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGI 321
           GVF G CG NLNH V +VGYG+ N   YW+++NS G  WGE G+++M R++    GLCGI
Sbjct: 292 GVFDGTCGTNLNHGVVVVGYGTENGRDYWIVRNSRGNTWGEAGYMKMARNIANPRGLCGI 351

Query: 322 ARKASYPI 329
           A +ASYP+
Sbjct: 352 AMRASYPL 359


>gi|341850671|gb|AEK97329.1| chromoplast senescence-associated protein 12 [Brassica rapa var.
           parachinensis]
          Length = 260

 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 130/260 (50%), Positives = 176/260 (67%), Gaps = 7/260 (2%)

Query: 74  EFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG-LPRSIDWRARGAVTP 132
           +FA++T++EF + +TGYK    ++ +      +  F Y +   G LP ++DWR +GAVTP
Sbjct: 1   QFAEITNDEFRSMYTGYK--GDSVLSSQSQTKSTSFRYQNVSSGALPIAVDWRKKGAVTP 58

Query: 133 VKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYI 191
           +KNQGSCGCCW FSAVAA+EG T+I+ G+LISLSEQQ++DC +   GC GG +D AF +I
Sbjct: 59  IKNQGSCGCCWAFSAVAAIEGATQIKKGKLISLSEQQLVDCDTNDFGCSGGLIDTAFEHI 118

Query: 192 IRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAI 250
           + + GLT E  YPY+  +  C  +     AA I  Y+DVP + E AL  AV+ QPVSV I
Sbjct: 119 MATGGLTTESNYPYKGEDATCKIKSTXPSAASITGYEDVPVNDENALMKAVAHQPVSVGI 178

Query: 251 DASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRM 309
           +     F++YS GVF G C   L+HAVT VGY  S+ G  YW+IKNSWG  WGEGG++R+
Sbjct: 179 EGGGFDFQFYSSGVFTGECTTYLDHAVTAVGYSQSSAGSKYWIIKNSWGTKWGEGGYMRI 238

Query: 310 RRDV-GGAGLCGIARKASYP 328
           ++D+    GLCG+A KASYP
Sbjct: 239 KKDIKDKEGLCGLAMKASYP 258


>gi|125604306|gb|EAZ43631.1| hypothetical protein OsJ_28254 [Oryza sativa Japonica Group]
          Length = 369

 Score =  255 bits (651), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 144/317 (45%), Positives = 191/317 (60%), Gaps = 26/317 (8%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           E+++   +E W  Q  R  ++  EKA RF +FK N R I +FNR  ++ YKL LN F D+
Sbjct: 41  EEALWELYERWRGQH-RVARDLGEKARRFNVFKDNVRLIHEFNRR-DEPYKLRLNRFGDM 98

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
           T +E                  + +YA++   +    RG       R  GAV  VK+QG 
Sbjct: 99  TADE-----------------SAGAYASSRVSHHRMFRGRGEKAQ-RLHGAVGAVKDQGQ 140

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSRGCYGGWMDDAFSYIIRSQ 195
           CG CW FS +AAVEGI  IRT  L +LSEQQ++DC   +G+ GC GG MD+AF YI +  
Sbjct: 141 CGSCWAFSTIAAVEGINAIRTSNLTALSEQQLVDCDTKTGNAGCDGGLMDNAFQYIAKHG 200

Query: 196 GLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASS 254
           G+     YPY+ R+  C     +  A  I  Y+DVP  SE AL+ AV+ QPVSVAI+A  
Sbjct: 201 GVAASSAYPYRARQSSCKSSAASSPAVTIDGYEDVPANSESALKKAVANQPVSVAIEAGG 260

Query: 255 PGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDV 313
             F++YS GVFAG CG  L+H V  VGYG++ +G  YW+++NSWG +WGE G+IRM+RDV
Sbjct: 261 SHFQFYSEGVFAGKCGTELDHGVAAVGYGTTVDGTKYWIVRNSWGADWGEKGYIRMKRDV 320

Query: 314 GGA-GLCGIARKASYPI 329
               GLCGIA +ASYPI
Sbjct: 321 SAKEGLCGIAMEASYPI 337


>gi|326431661|gb|EGD77231.1| cysteine protease [Salpingoeca sp. ATCC 50818]
          Length = 347

 Score =  255 bits (651), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 137/304 (45%), Positives = 181/304 (59%), Gaps = 14/304 (4%)

Query: 35  RTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIASHTGYK 91
           + Y++  E+A R  IF+++  FIEK N E   G  TY + +NEFADLT EEF   H   +
Sbjct: 40  KVYESAEEEARRAAIFQESLDFIEKHNAEAAAGMHTYLVGVNEFADLTREEFRQHHV-TR 98

Query: 92  MP----TRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSA 147
           +P     R+    +     +     DS  G    IDWR RGAVTPV+NQG CG   IF+A
Sbjct: 99  LPFDDDKRDPVTATLHLDEHAVHAADSN-GDSSGIDWRKRGAVTPVRNQGQCGNPAIFAA 157

Query: 148 VAAVEGITKIRTGRLISLSEQQVLDCSGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQR 207
           V AVEG+  I +G L+ LS QQV+DCSG+ GC GG +   F YI R+ GL     YP   
Sbjct: 158 VEAVEGMHAISSGNLVELSTQQVIDCSGTPGCSGGSLVSFFKYIARNGGLDSAADYPTSG 217

Query: 208 REGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFA 266
             G CN  + A   A++  Y  VP  +E  L  AV + PV+VAI+A +P F+ Y+ GV++
Sbjct: 218 AGGQCNKAKEARHVAKVGGYSVVPPRNETKLAAAVFKMPVAVAIEADTPSFQMYTSGVYS 277

Query: 267 GPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKAS 326
           GPCG  L+HAV +VGY       YW++KNSWG +WG+ G+I M+R VG AG+CGI   A 
Sbjct: 278 GPCGTQLDHAVLVVGYTDE----YWIVKNSWGASWGDQGYIMMKRGVGAAGICGITLDAM 333

Query: 327 YPIA 330
           YP A
Sbjct: 334 YPTA 337


>gi|15290195|dbj|BAB63884.1| putative cysteine protease [Oryza sativa Japonica Group]
 gi|125525813|gb|EAY73927.1| hypothetical protein OsI_01811 [Oryza sativa Indica Group]
          Length = 342

 Score =  255 bits (651), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 142/309 (45%), Positives = 188/309 (60%), Gaps = 19/309 (6%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           E WMA+  +TYK   EK  RF IF+ N  FI  +  +      + +N+FADLT++EF+A+
Sbjct: 44  EEWMAKFGKTYKCHGEKEHRFGIFRDNVHFIRGYKPQVTYDSAVGINQFADLTNDEFVAT 103

Query: 87  HTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFS 146
           +TG K P    + +           P      P  IDWR RGAVT VK+QG+CG CW F+
Sbjct: 104 YTGAKPPHPKEAPR-----------PVDPIWTPCCIDWRFRGAVTGVKDQGACGSCWAFA 152

Query: 147 AVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPY 205
           AVAA+EG+TKIRTG+L  LSEQ+++DC + S GC GG  D AF  +    G+T E  Y Y
Sbjct: 153 AVAAIEGLTKIRTGQLTPLSEQELVDCDTNSNGCGGGHTDRAFELVASKGGITAESDYRY 212

Query: 206 QRREGYCNWQRGAM-KAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYSGG 263
           +  +G C         AARI  Y+ VP + E  L  AV+RQPV+V IDAS P F++Y  G
Sbjct: 213 EGFQGKCRVDDMLFNHAARIGGYRAVPPNDERQLATAVARQPVTVYIDASGPAFQFYKSG 272

Query: 264 VFAGPCGNNLNHAVTIVGY---GSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV-GGAGLC 319
           VF GPCG + NHAVT+VGY   G+S +  YW+ KNSWG+ WG+ G+I + +DV    G C
Sbjct: 273 VFPGPCGASSNHAVTLVGYCQDGASGK-KYWVAKNSWGKTWGQQGYILLEKDVLQPHGTC 331

Query: 320 GIARKASYP 328
           G+A    YP
Sbjct: 332 GLAVSPFYP 340


>gi|53791858|dbj|BAD53944.1| putative cysteine protease [Oryza sativa Japonica Group]
          Length = 335

 Score =  254 bits (650), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 142/309 (45%), Positives = 186/309 (60%), Gaps = 19/309 (6%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           E WMA+  +TYK   EK  RF IF+ N  FI  +  +      + +N+FADLT++EF+A+
Sbjct: 37  EEWMAKFGKTYKCHGEKEHRFGIFRDNVHFIRGYKPQVTYDSAVGINQFADLTNDEFVAT 96

Query: 87  HTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFS 146
           +TG K P    + +           P      P  IDWR RGAVT VK+QG+CG CW F+
Sbjct: 97  YTGAKPPHPKEAPR-----------PVDPIWTPCCIDWRFRGAVTGVKDQGACGSCWAFA 145

Query: 147 AVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPY 205
           AVAA+EG+TKIRTG+L  LSEQ+++DC + S GC GG  D AF  +    G+T E  Y Y
Sbjct: 146 AVAAIEGLTKIRTGQLTPLSEQELVDCDTNSNGCGGGHTDRAFELVASKGGITAESDYRY 205

Query: 206 QRREGYCNWQRGAM-KAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGFRYYSGG 263
           +  +G C         AA I  Y+ V P  E  L  AV+RQPV+V IDAS P F++Y  G
Sbjct: 206 EGFQGKCRVDDMLFNHAASIGGYRAVPPNDERQLATAVARQPVTVYIDASGPAFQFYKSG 265

Query: 264 VFAGPCGNNLNHAVTIVGY---GSSNEGPYWLIKNSWGQNWGEGGFIRMRRD-VGGAGLC 319
           VF GPCG + NHAVT+VGY   G+S +  YWL KNSWG+ WG+ G+I + +D V   G C
Sbjct: 266 VFPGPCGASSNHAVTLVGYCQDGASGK-KYWLAKNSWGKTWGQQGYILLEKDIVQPHGTC 324

Query: 320 GIARKASYP 328
           G+A    YP
Sbjct: 325 GLAVSPFYP 333


>gi|297830594|ref|XP_002883179.1| hypothetical protein ARALYDRAFT_318695 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329019|gb|EFH59438.1| hypothetical protein ARALYDRAFT_318695 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 308

 Score =  254 bits (650), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 133/310 (42%), Positives = 190/310 (61%), Gaps = 25/310 (8%)

Query: 26  HELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIA 85
           +E W+ ++ + Y    EK  R KIFK+N +FI++ N   NQT+++ L  FADLT++E   
Sbjct: 2   YERWLVENRKNYNGLGEKERRCKIFKENLKFIDEHNSLPNQTFEVGLTRFADLTNDE--- 58

Query: 86  SHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIF 145
                  P   +      Y             LP  IDWRA+GAV PVK+QG+CG CW F
Sbjct: 59  -------PKDFMKADRYLYKEGDI--------LPDEIDWRAKGAVVPVKDQGNCGSCWAF 103

Query: 146 SAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERV 202
           SAV AVEGI +I+TG LISLS+Q+++DC     + GC GG M+ AF +II + G+  ++ 
Sbjct: 104 SAVGAVEGINQIKTGELISLSDQELIDCDRGFVNAGCEGGVMNYAFEFIINNGGIESDQD 163

Query: 203 YPYQRRE-GYCNW-QRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRY 259
           YPY   + G CN  ++   +  +I  Y+ V    E +L+ AV+ QPV VAI+ASS  F+ 
Sbjct: 164 YPYTATDLGVCNADKKNNTRVVKIDGYEYVAQNDEKSLKKAVAHQPVGVAIEASSQAFKL 223

Query: 260 YSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GL 318
           Y  GVF G CG  L+H V +VGYG+S+   YW+I+NSWG NWGE G+++++R++  + G 
Sbjct: 224 YKSGVFTGTCGIYLDHGVVVVGYGTSSGEDYWIIRNSWGLNWGENGYVKLQRNIDDSFGK 283

Query: 319 CGIARKASYP 328
           CG+A   SYP
Sbjct: 284 CGVAMMPSYP 293


>gi|302763831|ref|XP_002965337.1| hypothetical protein SELMODRAFT_230602 [Selaginella moellendorffii]
 gi|300167570|gb|EFJ34175.1| hypothetical protein SELMODRAFT_230602 [Selaginella moellendorffii]
          Length = 343

 Score =  254 bits (649), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 135/338 (39%), Positives = 197/338 (58%), Gaps = 18/338 (5%)

Query: 1   MLIIMVTWASLVMSR-TLHED----SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFR 55
           +L+++V      ++R    ED     I    E W A+  ++Y +  EKA R  IF     
Sbjct: 11  ILLVVVGATPFAIARPAALEDGRALEIKNMFEDWAAKHGKSYSSDLEKARRLMIFSDTLA 70

Query: 56  FIEKFNREGNQTYKLSLNEFADLTDEEFIASHTG-YKMPTRNISNQSQSYANNWFGYPDS 114
           +IEK N + N T+ L LN+F+DLT+ EF A H G +K P       ++    +       
Sbjct: 71  YIEKHNAQPNTTFTLGLNKFSDLTNAEFRAMHVGKFKRPRYQDRLPAEDEDVD------- 123

Query: 115 RRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS 174
              LP S+DWR +GAVTP+K+QG CG CW FSA+A++E    + T  L+SLSEQQ++DC 
Sbjct: 124 VSSLPTSLDWRQKGAVTPIKDQGDCGSCWAFSAIASIESAHFLATKELVSLSEQQLMDCD 183

Query: 175 G-SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAM--KAARIRSYQDVP 231
               GC GG M+ AF +++++ G+T E  YPY    G CN  + A+  K A I  ++ V 
Sbjct: 184 TVDAGCDGGLMETAFKFVVKNGGVTTEASYPYTGSVGSCNANKVAIINKVAEITGFKVVT 243

Query: 232 -TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPY 290
             S  AL  AVS+ PV+V+I  S   F+ Y  G+ +G CG++L+H V ++GYG+    PY
Sbjct: 244 EDSADALMKAVSKTPVTVSICGSDENFQNYKSGILSGQCGDSLDHGVLLIGYGTEGGMPY 303

Query: 291 WLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           W+IKNSWG +WGE GF+++ R   G G+CG+   +SYP
Sbjct: 304 WIIKNSWGTSWGEDGFMKIERK-DGDGICGMNGDSSYP 340


>gi|600111|emb|CAA84378.1| cysteine proteinase [Vicia sativa]
          Length = 359

 Score =  254 bits (649), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 143/316 (45%), Positives = 199/316 (62%), Gaps = 11/316 (3%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           E S+   +E W +    T +N  EK  RF +FK N   +   N+  ++ YKL LN+F D+
Sbjct: 33  EKSLWNLYERWRSHHTVT-RNLDEKHNRFNVFKANVMHVHNTNKL-DKPYKLKLNKFGDM 90

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
           T+ EF   +   K+    +  +  S+ N  F Y ++   +P SIDWR +GAVT VK+QG 
Sbjct: 91  TNYEFRRIYADSKISHHRMF-RGMSHENGTFMYENAV-DVPSSIDWRNKGAVTGVKDQGQ 148

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSYIIRSQG 196
           CG CW FS +AAVEGI +I+T +L+SLSEQQ++DC    + GC GG M+ AF + I+  G
Sbjct: 149 CGSCWAFSTIAAVEGINQIKTQKLVSLSEQQLVDCDTEENEGCNGGLMEYAFEF-IKQNG 207

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSP 255
           +T E  YPY  ++G C+ ++   KA  I  +++VP  +E AL  A ++QPVSVAIDA   
Sbjct: 208 ITTESNYPYAAKDGTCDVEKED-KAVSIDGHENVPINNEAALLKAAAKQPVSVAIDAGGY 266

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYG-SSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG 314
            F++YS GVF G C  +LNH V IVGYG + +   YW++KNSWG  WGE G+IRM+R + 
Sbjct: 267 NFQFYSEGVFTGHCDTDLNHGVAIVGYGVTQDRTKYWIMKNSWGSEWGEQGYIRMQRGIS 326

Query: 315 G-AGLCGIARKASYPI 329
              GLCGIA +ASYPI
Sbjct: 327 SREGLCGIAMEASYPI 342


>gi|125525815|gb|EAY73929.1| hypothetical protein OsI_01813 [Oryza sativa Indica Group]
          Length = 336

 Score =  254 bits (648), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 145/341 (42%), Positives = 201/341 (58%), Gaps = 25/341 (7%)

Query: 1   MLIIMVTWASLVMSRTLH-----EDSISAK-HELWMAQSARTYKNQAEKAMRFKIFKKNF 54
           +L++    A   M+ + +     +D ++ +  E WMA+  +TYK   EK  RF IF+ N 
Sbjct: 6   LLVVCTLMALQAMAASAYYNNGSDDGVTMQMFEEWMAKFGKTYKCHGEKEHRFGIFRDNV 65

Query: 55  RFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDS 114
            FI  +  +      + +N+FADLT++EF+A++TG K P    + +           P  
Sbjct: 66  HFIRGYKPQVTYDSAVGINQFADLTNDEFVATYTGAKPPHPKEAPR-----------PVD 114

Query: 115 RRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC- 173
               P  IDWR RGAVT VK+QG+CG CW F+AVAA+EG+TKIRTG+L  LSEQ+++DC 
Sbjct: 115 PIWTPCCIDWRFRGAVTGVKDQGACGSCWAFAAVAAIEGLTKIRTGQLTPLSEQELVDCD 174

Query: 174 SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAM-KAARIRSYQDVPT 232
           + S GC GG  D AF  +    G+T E  Y Y+  +G C         AA I  Y+ VP 
Sbjct: 175 TNSNGCGGGHTDRAFELVASKGGITAESDYRYEGFQGKCRVDDMLFNHAASIGGYRAVPP 234

Query: 233 S-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGY---GSSNEG 288
           + E  L  AV+RQPV+V IDAS P F++Y  GVF GPCG + NHAVT+VGY   G+S + 
Sbjct: 235 NDERQLATAVARQPVTVYIDASGPAFQFYKSGVFPGPCGASSNHAVTLVGYCQDGASGK- 293

Query: 289 PYWLIKNSWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYP 328
            YW+ KNSWG+ WG+ G+I + +DV    G CG+A    YP
Sbjct: 294 KYWVAKNSWGKTWGQQGYILLEKDVLQPHGTCGLAVSPFYP 334


>gi|302790828|ref|XP_002977181.1| hypothetical protein SELMODRAFT_106402 [Selaginella moellendorffii]
 gi|300155157|gb|EFJ21790.1| hypothetical protein SELMODRAFT_106402 [Selaginella moellendorffii]
          Length = 337

 Score =  254 bits (648), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 133/336 (39%), Positives = 194/336 (57%), Gaps = 16/336 (4%)

Query: 1   MLIIMVTWASLVMSR-TLHED----SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFR 55
           +L+++V      ++R    ED     I    E W A+  ++Y +  EKA R  IF     
Sbjct: 7   ILLVVVGATPFAIARPAALEDGRALEIKNMFEDWAAKHGKSYSSDWEKARRLMIFSDTLA 66

Query: 56  FIEKFNREGNQTYKLSLNEFADLTDEEFIASHTG-YKMPTRNISNQSQSYANNWFGYPDS 114
           +IEK N + N T+ L LN+F+DLT+ EF A H G +K P       ++    +       
Sbjct: 67  YIEKHNAQPNTTFTLGLNKFSDLTNAEFRAMHVGKFKRPRYQDRLPAEDEDVD------- 119

Query: 115 RRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS 174
              LP S+DWR +GAVTP+K+QG CG CW FSA+A++E    + T  L+SLSEQQ++DC 
Sbjct: 120 VSSLPTSLDWRQKGAVTPIKDQGDCGSCWAFSAIASIESAHFLATKELVSLSEQQLMDCD 179

Query: 175 G-SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-T 232
               GC GG M+ AF +++++ G+T E  YPY    G CN  +   K A I  ++ V   
Sbjct: 180 TVDAGCDGGLMETAFKFVVKNGGVTTEAAYPYTGSVGSCNANKAKNKVAEITGFKVVTED 239

Query: 233 SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWL 292
           S  AL  AVS+ PV+V+I  S   F+ Y  G+ +G C ++L+H V ++GYG+    PYW+
Sbjct: 240 SADALMKAVSKTPVTVSICGSDENFQNYKSGILSGKCDDSLDHGVLLIGYGTEGGMPYWI 299

Query: 293 IKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           IKNSWG +WGE GF+++ R   G G+CG+   +SYP
Sbjct: 300 IKNSWGTSWGEDGFMKIERK-DGDGMCGMNGDSSYP 334


>gi|157093563|gb|ABV22436.1| cysteine proteinase [Oxyrrhis marina]
          Length = 329

 Score =  254 bits (648), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 131/313 (41%), Positives = 192/313 (61%), Gaps = 13/313 (4%)

Query: 22  ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDE 81
           I A+ E + A+   +Y  + E+A R  +F +N + I + N +G+ TY L +N+FADLT E
Sbjct: 15  IDAQWEEFKAKFGESYNGEEEEAERKGVFAQNVQLINEENSKGH-TYTLGVNQFADLTVE 73

Query: 82  EFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGC 141
           EF  ++ G+K P +   + +    + + G       LP S+DW ++GAVTPVKNQG CG 
Sbjct: 74  EFSKTYMGFKKPAQKYGDAAYLGRHVYNG-----EALPTSVDWSSQGAVTPVKNQGQCGS 128

Query: 142 CWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---RGCYGGWMDDAFSYIIRSQGLT 198
           CW FS   ++EG  +I TG+L+SLSEQQ +DC+G+   +GC GG MD AF Y   +  L 
Sbjct: 129 CWSFSTTGSLEGANEISTGKLVSLSEQQFVDCAGTYGNQGCNGGLMDSAFKYA-EANALC 187

Query: 199 DERVYPYQRREGYCNWQRGAMKAAR--IRSYQDVPT-SELALRYAVSRQPVSVAIDASSP 255
            E+ YPY+  +G C     +   A+  +  Y+DV + SE  +  AV++QPVS+AI+A   
Sbjct: 188 TEQSYPYKGTDGSCQASSCSTGLAKGSVSGYKDVSSDSEQDMMSAVAQQPVSIAIEADKS 247

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG 315
            F+ YSGGV  G CG +L+H V  VGYG+ +   YW +KNSWG  WG  G++ ++R  GG
Sbjct: 248 VFQLYSGGVLTGACGASLDHGVLAVGYGTLSGTDYWKVKNSWGSTWGMSGYVLLQRGKGG 307

Query: 316 AGLCGIARKASYP 328
           +G CG+  + SYP
Sbjct: 308 SGECGLLSEPSYP 320


>gi|344275470|ref|XP_003409535.1| PREDICTED: cathepsin S-like isoform 1 [Loxodonta africana]
          Length = 331

 Score =  254 bits (648), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 145/340 (42%), Positives = 203/340 (59%), Gaps = 31/340 (9%)

Query: 6   VTWASLVMSRT---LHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           + W +LV S     LH+D     H +LW    ++ YK + E+  R  I++KN +F+   N
Sbjct: 4   LLWVALVCSSAMARLHKDPTLDNHWDLWKKTYSKQYKEKNEEVARRLIWEKNLKFVMLHN 63

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPDSR 115
            E   G  +Y LS+N   D+T EE ++  +  ++P+   RN++ +S          P+ +
Sbjct: 64  LEHSMGMHSYDLSMNHLGDMTSEEVMSLMSSLRVPSQWQRNVTFKSN---------PNQK 114

Query: 116 RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG 175
             LP S+DWR +G VT VK QGSCG CW FSAV A+E   K++TG+L+SLS Q ++DCSG
Sbjct: 115 --LPDSLDWREKGCVTDVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSG 172

Query: 176 ----SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP 231
               ++GC GG+M  AF YII + G+  E  YPY+  +G C +     +AA    Y ++P
Sbjct: 173 EKYSNKGCNGGFMTRAFQYIIDNNGIDSEASYPYKATDGKCQYDP-KNRAATCSKYTELP 231

Query: 232 T-SELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEG 288
             SE AL+ AV+ + PVSV IDAS P F  Y  GV+  P C +N+NH V +VGYG+ N  
Sbjct: 232 YGSEDALKEAVANKGPVSVGIDASRPSFFLYKSGVYYDPSCTDNVNHGVLVVGYGNLNGK 291

Query: 289 PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
            YWL+KNSWG N+GE G+IRM R+ G    CGIA   SYP
Sbjct: 292 DYWLVKNSWGLNFGEQGYIRMARNSGNH--CGIASFPSYP 329


>gi|320169658|gb|EFW46557.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 324

 Score =  254 bits (648), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 139/310 (44%), Positives = 189/310 (60%), Gaps = 16/310 (5%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           + W A    +Y    E+  R  I++ N  FIEK N EG  +YKL++N+FADLT  EF A 
Sbjct: 23  DSWKATHGVSYATVGEETARRGIYRANLDFIEKHNSEG-HSYKLAVNKFADLTYPEFAAK 81

Query: 87  HTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFS 146
           + G +    + +N ++S+A +   Y      LP S+DWR  G VTP+K+QG CG CW FS
Sbjct: 82  YLGLRF---DATNATKSFAAS--TYLPRMVSLPDSVDWRTAGIVTPIKDQGQCGSCWSFS 136

Query: 147 AVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVY 203
              +VEG    +TG+L+SLSEQ ++DCS   G+ GC GG MD AF YII + G+  E  Y
Sbjct: 137 TTGSVEGQHARKTGQLVSLSEQNLVDCSSAQGNAGCNGGLMDQAFQYIISNNGIDTESSY 196

Query: 204 PYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR-QPVSVAIDASSPGFRYYS 261
           PY  ++G C +   A   A + SYQD+ + SE  L+ AV+   P+SVAIDAS P F++YS
Sbjct: 197 PYTAQDGTCQFNS-ANVGATVASYQDIASGSESDLQNAVATVGPISVAIDASQPSFQFYS 255

Query: 262 GGVFAGPC--GNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLC 319
            GV+  P    + L+H V  VGYG+S    YWL+KNSWG +WG+ G+I M R+      C
Sbjct: 256 SGVYNEPACSSSQLDHGVLAVGYGTSGSSDYWLVKNSWGTSWGQSGYIWMTRNSNNQ--C 313

Query: 320 GIARKASYPI 329
           GIA  ASYP+
Sbjct: 314 GIATAASYPL 323


>gi|125570286|gb|EAZ11801.1| hypothetical protein OsJ_01675 [Oryza sativa Japonica Group]
          Length = 319

 Score =  253 bits (647), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 142/309 (45%), Positives = 186/309 (60%), Gaps = 19/309 (6%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           E WMA+  +TYK   EK  RF IF+ N  FI  +  +      + +N+FADLT++EF+A+
Sbjct: 21  EEWMAKFGKTYKCHGEKEHRFGIFRDNVHFIRGYKPQVTYDSAVGINQFADLTNDEFVAT 80

Query: 87  HTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFS 146
           +TG K P    + +           P      P  IDWR RGAVT VK+QG+CG CW F+
Sbjct: 81  YTGAKPPHPKEAPR-----------PVDPIWTPCCIDWRFRGAVTGVKDQGACGSCWAFA 129

Query: 147 AVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPY 205
           AVAA+EG+TKIRTG+L  LSEQ+++DC + S GC GG  D AF  +    G+T E  Y Y
Sbjct: 130 AVAAIEGLTKIRTGQLTPLSEQELVDCDTNSNGCGGGHTDRAFELVASKGGITAESDYRY 189

Query: 206 QRREGYCNWQRGAM-KAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGFRYYSGG 263
           +  +G C         AA I  Y+ V P  E  L  AV+RQPV+V IDAS P F++Y  G
Sbjct: 190 EGFQGKCRVDDMLFNHAASIGGYRAVPPNDERQLATAVARQPVTVYIDASGPAFQFYKSG 249

Query: 264 VFAGPCGNNLNHAVTIVGY---GSSNEGPYWLIKNSWGQNWGEGGFIRMRRD-VGGAGLC 319
           VF GPCG + NHAVT+VGY   G+S +  YWL KNSWG+ WG+ G+I + +D V   G C
Sbjct: 250 VFPGPCGASSNHAVTLVGYCQDGASGK-KYWLAKNSWGKTWGQQGYILLEKDIVQPHGTC 308

Query: 320 GIARKASYP 328
           G+A    YP
Sbjct: 309 GLAVSPFYP 317


>gi|57118009|gb|AAW34136.1| cysteine protease gp3a [Zingiber officinale]
          Length = 475

 Score =  253 bits (647), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 140/319 (43%), Positives = 191/319 (59%), Gaps = 14/319 (4%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEF 75
           ++ +   ++ W  +      +Q     R ++FK+N RF+++ N     G   Y+L +N F
Sbjct: 45  DEEVRIIYQEWRVKHRPAENDQYVGDYRLEVFKENLRFVDEHNAAADRGEHAYRLGMNRF 104

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG--LPRSIDWRARGAVTPV 133
           ADLT+EE+ A         R++S   +S +         R G  LP SIDWR +GAV  V
Sbjct: 105 ADLTNEEYRARFL------RDLSRLGRSTSGEISNQYRLREGDVLPDSIDWREKGAVVAV 158

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYII 192
           KNQG CG CW F+A+AAVEGI +I TG LISLSEQQ++DCS  + GC GGW   AF YII
Sbjct: 159 KNQGRCGSCWAFAAIAAVEGINQIVTGDLISLSEQQLVDCSTRNYGCEGGWPYRAFQYII 218

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAID 251
            + G+  E  YPY    G CN  +       I SY++VP++ E +L+ A + QP+SV ID
Sbjct: 219 NNGGVNSEEHYPYTGTNGTCNTTKENAHVVSIDSYRNVPSNDEKSLQKAAANQPISVGID 278

Query: 252 ASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRR 311
           AS   F+ Y  G+F G C  +LNH VT+VGYG+ N   YW++KNSWG+NWG  G+I M R
Sbjct: 279 ASGRNFQLYHSGIFTGSCNTSLNHGVTVVGYGTENGNDYWIVKNSWGENWGNSGYILMER 338

Query: 312 DVG-GAGLCGIARKASYPI 329
           ++   +G CGIA   SYPI
Sbjct: 339 NIAESSGKCGIAISPSYPI 357


>gi|326503122|dbj|BAJ99186.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326512552|dbj|BAJ99631.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 389

 Score =  253 bits (646), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 140/333 (42%), Positives = 194/333 (58%), Gaps = 24/333 (7%)

Query: 18  HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQ---TYKLSLNE 74
           H D + A+  +WM    R+Y   +EKA RFK+++ N R+IE  N E      TY+L    
Sbjct: 52  HHDLMMARFHVWMTVQNRSYPTSSEKAHRFKVYRSNMRYIEALNAEATTSGFTYELGEGP 111

Query: 75  FADLTDEEFIASHTGYKMPTRN-----------ISNQSQSY--ANNWFGYPDSRRGLPRS 121
           F DLTDEEFI+ +TG K+P  +           I+  + S   A     Y +   G P  
Sbjct: 112 FTDLTDEEFISLYTG-KIPDDDHREDGVHDEQIITTHAGSVNGAEGVTVYANFSAGAPIR 170

Query: 122 IDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCY 180
           +DWR RGAVTPVK+QG CG CW F  VA +EGI KI+ GRL+SLSEQQ++DC     GC 
Sbjct: 171 MDWRKRGAVTPVKDQGKCGSCWAFPTVATIEGIHKIKRGRLVSLSEQQLVDCDFLDGGCN 230

Query: 181 GGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRY 239
           GGW  +AF +II++ G+T    Y Y+  EG C   R    AA+I  Y+ V + SE+++  
Sbjct: 231 GGWPRNAFQWIIQNGGITTTSSYTYKAAEGQCKGNR--KPAAKITGYRKVKSNSEVSMVN 288

Query: 240 AVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNN-LNHAVTIVGYGSSNEGP-YWLIKNSW 297
            V+ QP++ +I      F++Y GG++ GPC  + LNH +TIVGYG    G  YW++KNSW
Sbjct: 289 IVANQPIAASIVVHGGQFQHYKGGIYNGPCATSKLNHVITIVGYGQQAYGAKYWIVKNSW 348

Query: 298 GQNWGEGGFIRMRRDVGGA-GLCGIARKASYPI 329
           G  WG  G++ M+R      G CGIA +  +P+
Sbjct: 349 GAAWGNKGYMLMKRGTKNPLGQCGIAVRPIFPL 381


>gi|297816030|ref|XP_002875898.1| hypothetical protein ARALYDRAFT_485194 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297321736|gb|EFH52157.1| hypothetical protein ARALYDRAFT_485194 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 363

 Score =  253 bits (646), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 137/316 (43%), Positives = 190/316 (60%), Gaps = 10/316 (3%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           E+++   +E W    + T +   E   RF +F+ N   + + N++ N+ YKL +N FAD+
Sbjct: 30  EENVWKLYERWRDHHSVT-RASHEALKRFNVFRHNVLHVHRTNKK-NKPYKLKVNRFADI 87

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
           T  EF +S+ G  +    +  +     +  F Y +  R +P S+DWR +GAVT VKNQ  
Sbjct: 88  THHEFRSSYAGSNVKHHRML-RGPKRGSGGFMYENVTR-VPSSVDWREKGAVTEVKNQQD 145

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSYIIRSQG 196
           CG CW FS VAAVEGI KIRT +L+SLSEQ+++DC    ++GC GG M+ AF +I  + G
Sbjct: 146 CGSCWAFSTVAAVEGINKIRTNKLVSLSEQELVDCDTEENQGCAGGLMEPAFEFIKNNGG 205

Query: 197 LTDERVYPYQRRE-GYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASS 254
           +  E  YPY   +  +C  +    +   I  ++ VP   E AL  AV+ QPVSVAIDA S
Sbjct: 206 IKTEETYPYDSNDVQFCRAKSIDGETVTIDGHEHVPENDEEALLKAVAHQPVSVAIDAGS 265

Query: 255 PGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDV 313
             F+ YS GVF G CG  LNH V IVGYG +  G  YW+++NSWG  WGEGG++R+ R +
Sbjct: 266 SDFQLYSEGVFIGECGTQLNHGVVIVGYGETKNGTKYWIVRNSWGPEWGEGGYVRIERGI 325

Query: 314 G-GAGLCGIARKASYP 328
               G CGIA +ASYP
Sbjct: 326 SENEGRCGIAMEASYP 341


>gi|297845822|ref|XP_002890792.1| hypothetical protein ARALYDRAFT_473117 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336634|gb|EFH67051.1| hypothetical protein ARALYDRAFT_473117 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 322

 Score =  253 bits (645), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 143/324 (44%), Positives = 201/324 (62%), Gaps = 40/324 (12%)

Query: 16  TLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEF 75
           TL+E SI   H+ WM Q +R Y++++EK MR ++FKKN +FIE FN  GNQ+Y + +NEF
Sbjct: 28  TLNEQSIVDYHQQWMTQFSRVYQDESEKEMRLQVFKKNLKFIENFNNMGNQSYTVGVNEF 87

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSY-----ANNWFGYPDSRRGLPRSIDWRARGAV 130
            D T EEF+A+HTG ++   N++  S+ +     + NW    D       S DWR  GAV
Sbjct: 88  TDWTIEEFLATHTGLRV---NVTTLSELFNETMPSRNW-NISDIDID-DESKDWRDEGAV 142

Query: 131 TPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR--GCYGGWMDDAF 188
            PVK QG+C             G+TKI    L++LSEQQ++DC   +  GC GG +++AF
Sbjct: 143 IPVKVQGAC-------------GLTKISGKNLLTLSEQQLIDCDTEKNTGCDGGGIEEAF 189

Query: 189 SYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVS 247
            YII++ G++ E  YPYQ ++G C     +    +IR ++ VP+ +E AL  AV RQPVS
Sbjct: 190 KYIIKNGGVSLETEYPYQVKKGSCRANARSATQTQIRGFEMVPSHNERALLEAVRRQPVS 249

Query: 248 VAIDASSPGFRYYSGGVFAG-PCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGF 306
           V IDA +  F+ Y GGV+AG  CG ++NHAVT VGYG+       +I     Q+WGE G+
Sbjct: 250 VLIDARADSFKTYKGGVYAGLDCGTDVNHAVTFVGYGT-------MI-----QSWGENGY 297

Query: 307 IRMRRDVG-GAGLCGIARKASYPI 329
           +R+RRDV    G+CGIA+ A+YPI
Sbjct: 298 MRIRRDVEWPQGMCGIAQVAAYPI 321


>gi|71897043|ref|NP_001026516.1| cathepsin S precursor [Gallus gallus]
 gi|53126701|emb|CAG30977.1| hypothetical protein RCJMB04_1f23 [Gallus gallus]
          Length = 328

 Score =  253 bits (645), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 139/337 (41%), Positives = 198/337 (58%), Gaps = 22/337 (6%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L  M    +LV      + ++    +LW     + Y++QAE+  R   ++KN R +   
Sbjct: 3   LLRCMAVLVTLVAVMGHPDPTLDQHWQLWKKAHGKEYRHQAEEGQRRATWEKNLRLVMLH 62

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N E   G  +Y+L +N   D+T E+  A  TG ++P  +  NQ+ +Y          R G
Sbjct: 63  NLEHSLGLHSYQLGMNHMGDMTSEDVAALLTGLRVPYGH--NQTSTYRR--------RGG 112

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
            P ++DWR +G VT VKNQG+CG CW FSAV A+E   K++TG+L+SLS Q ++DCS   
Sbjct: 113 APDAMDWREKGCVTEVKNQGACGACWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSMMY 172

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TS 233
           G++GC GG+M  AF YII + G+  E  YPY  + G C +   + +AA    Y ++P   
Sbjct: 173 GNKGCGGGFMTRAFQYIIDNNGIDSEESYPYMAQNGTCQYNV-STRAATCSKYVELPYAD 231

Query: 234 ELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPYW 291
           E AL+ AV+   PVSVAIDA+ P F  Y  GV+  P C   +NH V +VGYG+ NE  +W
Sbjct: 232 EAALKDAVANVGPVSVAIDATQPTFFLYRSGVYDDPRCTQEVNHGVLVVGYGTLNEKDFW 291

Query: 292 LIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           L+KNSWG+ +G+GG+IRM R+   A  CGIA  ASYP
Sbjct: 292 LVKNSWGERFGDGGYIRMSRN--HANHCGIASYASYP 326


>gi|57118011|gb|AAW34137.1| cysteine protease gp3b [Zingiber officinale]
          Length = 466

 Score =  253 bits (645), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 139/319 (43%), Positives = 194/319 (60%), Gaps = 14/319 (4%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEF 75
           ++ +   ++ W A+      +Q     R ++FK+N RF+++ N     G   Y+L +N F
Sbjct: 36  DEEVRIIYQEWRAKHRPAENDQYVGDYRLEVFKENLRFVDEHNAAADRGEHAYRLGMNRF 95

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG--LPRSIDWRARGAVTPV 133
           ADLT+EE+ A         R++S   +S +         R G  LP SIDWR +GAV  V
Sbjct: 96  ADLTNEEYRARFL------RDLSRLGRSTSGEISNQYRLREGDVLPDSIDWREKGAVVAV 149

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYII 192
           K+QG CG CW F+A+A VEGI +I TG LISLSEQQ++DCS  + GC GGW   AF YII
Sbjct: 150 KSQGRCGSCWAFAAIATVEGINQIVTGDLISLSEQQLVDCSTRNHGCEGGWPYRAFQYII 209

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAID 251
            + G+  E  YPY    G CN  +G      I SY++VP++ E +L+ AV+ QP+SV I+
Sbjct: 210 NNGGVNSEEHYPYTGTNGTCNTTKGNAHVVSIDSYRNVPSNDEKSLQKAVANQPISVGIN 269

Query: 252 ASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRR 311
           AS   F+ Y  G+F G C  +LNH VT+VGYG+ N   YW++KNSWG++WG+ G+I M R
Sbjct: 270 ASGRNFQLYHSGIFTGSCNTSLNHGVTVVGYGTVNGNDYWIVKNSWGESWGDSGYILMER 329

Query: 312 DVG-GAGLCGIARKASYPI 329
           ++   +G CGIA   SYPI
Sbjct: 330 NIAESSGKCGIAISPSYPI 348


>gi|18413507|ref|NP_567377.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|30315953|sp|Q9SUS9.1|CPR4_ARATH RecName: Full=Probable cysteine proteinase At4g11320; Flags:
           Precursor
 gi|5596478|emb|CAB51416.1| drought-inducible cysteine proteinase RD21A precursor-like protein
           [Arabidopsis thaliana]
 gi|7267831|emb|CAB81233.1| drought-inducible cysteine proteinase RD21A precursor-like protein
           [Arabidopsis thaliana]
 gi|14334764|gb|AAK59560.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|15293257|gb|AAK93739.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|332657596|gb|AEE82996.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 371

 Score =  253 bits (645), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 135/308 (43%), Positives = 186/308 (60%), Gaps = 10/308 (3%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEF-IA 85
           E WM +  + Y + AEK  R  IF+ N RFI   N E N +Y+L LN FADL+  E+   
Sbjct: 57  ESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAE-NLSYRLGLNRFADLSLHEYGEI 115

Query: 86  SHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIF 145
            H     P RN    + S   N +   D    LP+S+DWR  GAVT VK+QG C  CW F
Sbjct: 116 CHGADPRPPRNHVFMTSS---NRYKTSDGDV-LPKSVDWRNEGAVTEVKDQGLCRSCWAF 171

Query: 146 SAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQGLTDERVYP 204
           S V AVEG+ KI TG L++LSEQ +++C+  + GC GG ++ A+ +I+ + GL  +  YP
Sbjct: 172 STVGAVEGLNKIVTGELVTLSEQDLINCNKENNGCGGGKVETAYEFIMNNGGLGTDNDYP 231

Query: 205 YQRREGYCNWQ-RGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYSG 262
           Y+   G C  + +   K   I  Y+++P + E AL  AV+ QPV+  +D+SS  F+ Y  
Sbjct: 232 YKALNGVCEGRLKEDNKNVMIDGYENLPANDEAALMKAVAHQPVTAVVDSSSREFQLYES 291

Query: 263 GVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGI 321
           GVF G CG NLNH V +VGYG+ N   YW++KNS G  WGE G+++M R++    GLCGI
Sbjct: 292 GVFDGTCGTNLNHGVVVVGYGTENGRDYWIVKNSRGDTWGEAGYMKMARNIANPRGLCGI 351

Query: 322 ARKASYPI 329
           A +ASYP+
Sbjct: 352 AMRASYPL 359


>gi|302790836|ref|XP_002977185.1| hypothetical protein SELMODRAFT_106228 [Selaginella moellendorffii]
 gi|300155161|gb|EFJ21794.1| hypothetical protein SELMODRAFT_106228 [Selaginella moellendorffii]
          Length = 299

 Score =  253 bits (645), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 127/305 (41%), Positives = 185/305 (60%), Gaps = 13/305 (4%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           E W A+  ++Y + +EKA R  IF     +IEK N + N T+ L LN+F+DLT+ EF A+
Sbjct: 3   EDWAAKHGKSYSSDSEKARRLMIFSDTLAYIEKHNAQPNTTFTLGLNKFSDLTNAEFRAN 62

Query: 87  HTG-YKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIF 145
           + G +K P       ++    +          LP S+DWR  GAVTP+K+QG CG CW F
Sbjct: 63  YVGKFKSPRYQDRRPAKDVDVD-------VSSLPTSLDWRQEGAVTPIKDQGQCGSCWAF 115

Query: 146 SAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQGLTDERVYP 204
           SA+A++E    + T  L+SLSEQQ++DC    +GC GG+ +DAF +++ + G+T E  YP
Sbjct: 116 SAIASIESAHFLATKELVSLSEQQLIDCDTVDQGCQGGFPEDAFKFVVENGGVTTEEAYP 175

Query: 205 YQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGG 263
           Y    G CN  +   K   I  Y+DV   S  AL  AVS+ PV+V I  S   F+ Y  G
Sbjct: 176 YTGFAGSCNANKN--KVVEITGYKDVTKDSADALMKAVSKTPVTVGICGSDQNFQNYRSG 233

Query: 264 VFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIAR 323
           + +G C N+ +HAV ++GYG+    PYW+IKNSWG +WGE GF+++++   G G+CG+  
Sbjct: 234 ILSGQCSNSRDHAVLVIGYGTEGGMPYWIIKNSWGTSWGENGFMKIKKK-DGEGMCGMNG 292

Query: 324 KASYP 328
           ++SYP
Sbjct: 293 QSSYP 297


>gi|125525812|gb|EAY73926.1| hypothetical protein OsI_01810 [Oryza sativa Indica Group]
          Length = 319

 Score =  253 bits (645), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 141/309 (45%), Positives = 186/309 (60%), Gaps = 19/309 (6%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           E WMA+  +TYK   EK  RF IF+ N  FI  +  +      + +N+FADLT++EF+A+
Sbjct: 21  EEWMAKFGKTYKCHGEKEHRFGIFRDNVHFIRGYKPQVTYDSAVGINQFADLTNDEFVAT 80

Query: 87  HTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFS 146
           +TG K P    + +           P      P  IDWR RGAVT VK+QG+CG CW F+
Sbjct: 81  YTGAKPPHPKEAPR-----------PVDPIWTPCCIDWRFRGAVTGVKDQGACGSCWAFA 129

Query: 147 AVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPY 205
           AVAA+EG+TKIRTG+L  LSEQ+++DC + S GC GG  D AF  +    G+T E  Y Y
Sbjct: 130 AVAAIEGLTKIRTGQLTPLSEQELVDCDTNSNGCGGGHTDRAFELVASKGGITAESDYRY 189

Query: 206 QRREGYCNWQRGAM-KAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGFRYYSGG 263
           +  +G C         AA I  Y+ V P  E  L  AV+RQPV+V IDAS P F++Y  G
Sbjct: 190 EGFQGKCRVDDMLFNHAASIGGYRAVPPNDERQLATAVARQPVTVYIDASGPAFQFYKSG 249

Query: 264 VFAGPCGNNLNHAVTIVGY---GSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV-GGAGLC 319
           VF GPCG + NHAVT+VGY   G+S +  YW+ KNSWG+ WG+ G+I + +DV    G C
Sbjct: 250 VFPGPCGASSNHAVTLVGYCQDGASGK-KYWVAKNSWGKTWGQQGYILLEKDVLQPHGTC 308

Query: 320 GIARKASYP 328
           G+A    YP
Sbjct: 309 GLAVSPFYP 317


>gi|147769019|emb|CAN62459.1| hypothetical protein VITISV_015168 [Vitis vinifera]
          Length = 246

 Score =  252 bits (644), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 133/272 (48%), Positives = 173/272 (63%), Gaps = 33/272 (12%)

Query: 65  NQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDW 124
           +++YKLS+NEFADLT+EEF  S   +K    +    S  Y N           +P + DW
Sbjct: 2   DKSYKLSINEFADLTNEEFGTSRNRFKAHICSTEATSFKYEN--------VTAVPSTXDW 53

Query: 125 RARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---RGCYG 181
           R +GAVTP+K+QG CG CW FSAVAA+EGIT++ TG+LISLSEQ+++DC  S   +GC G
Sbjct: 54  RKKGAVTPIKDQGQCGSCWAFSAVAAMEGITQLSTGKLISLSEQELVDCDTSGEDQGCXG 113

Query: 182 GWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYA 240
                                YPY   +G CN ++ A  AA+I  Y+DVP  +E AL+ A
Sbjct: 114 A-------------------NYPYAGTDGTCNRKKAAHPAAKINGYEDVPANNEKALQKA 154

Query: 241 VSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQ 299
           V+ QP++VAIDA    F++YS GVF G CG  L+H V  VGYG+S++G  YWL+KNSWG 
Sbjct: 155 VAHQPIAVAIDAGGXEFQFYSSGVFTGQCGTELDHGVXAVGYGTSDDGMKYWLVKNSWGT 214

Query: 300 NWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
            WGE G+IRM+RDV    GLCGIA +ASYP A
Sbjct: 215 GWGEEGYIRMQRDVTAKEGLCGIAMQASYPTA 246


>gi|302763109|ref|XP_002964976.1| hypothetical protein SELMODRAFT_83176 [Selaginella moellendorffii]
 gi|302763113|ref|XP_002964978.1| hypothetical protein SELMODRAFT_83554 [Selaginella moellendorffii]
 gi|300167209|gb|EFJ33814.1| hypothetical protein SELMODRAFT_83176 [Selaginella moellendorffii]
 gi|300167211|gb|EFJ33816.1| hypothetical protein SELMODRAFT_83554 [Selaginella moellendorffii]
          Length = 300

 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 130/313 (41%), Positives = 183/313 (58%), Gaps = 29/313 (9%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           E W A+  ++Y +  EKA R  +F     +IEK N + N T+ L LN+F+DLT+ EF A+
Sbjct: 3   EDWAAKHDKSYSSDWEKARRLMVFSDTLAYIEKHNAQPNTTFTLGLNKFSDLTNAEFRAN 62

Query: 87  HTGYKMPTRNISNQSQSYANNWFGYPDSR---------RGLPRSIDWRARGAVTPVKNQG 137
           + G   P R               Y D R           LP S+DWR  GAVTP+K+QG
Sbjct: 63  YVGKFKPPR---------------YQDRRPAKDVDVDVSSLPTSLDWRQEGAVTPIKDQG 107

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQG 196
            CG CW FSA+A++E    + T  L+SLSEQQ++DC    +GC GG+ DDAF +++ + G
Sbjct: 108 QCGSCWAFSAIASIESAHFLATKELVSLSEQQLIDCDTVDQGCQGGFPDDAFKFVVENGG 167

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSP 255
           +T E  YPY    G CN  +   K   I  Y+DV   S  AL  AVS+ PV+V I  S  
Sbjct: 168 VTTEEAYPYTGFAGSCNTNKN--KVVEITGYKDVTKDSADALMKAVSKTPVTVGICGSDQ 225

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG 315
            F+ Y  G+ +G C N+ +HAV ++GYG+    PYW+IKNSWG +WGE GF+++++   G
Sbjct: 226 NFQNYRSGILSGQCCNSRDHAVLVIGYGTEGGMPYWIIKNSWGTSWGEDGFMKIKKK-DG 284

Query: 316 AGLCGIARKASYP 328
            G+CG+  ++SYP
Sbjct: 285 EGMCGMNGQSSYP 297


>gi|222636309|gb|EEE66441.1| hypothetical protein OsJ_22818 [Oryza sativa Japonica Group]
          Length = 318

 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 144/340 (42%), Positives = 191/340 (56%), Gaps = 40/340 (11%)

Query: 1   MLIIMVTWASLVMSRTL--HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIE 58
           +L+++    S +   T+     ++ A+H+ WMA+  RTYK+ AEKA RF++FK N   I+
Sbjct: 5   LLLVVAGGLSTMAKVTMASRAGTMEARHDKWMAEHGRTYKDAAEKARRFRVFKANVDLID 64

Query: 59  KFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL 118
           + N  GN+ Y+L+ N F DLTD EF A +TGY     N +N   + AN            
Sbjct: 65  RSNAAGNKRYRLATNRFTDLTDAEFAAMYTGY-----NPANTMYAAANATTRLSSEDDQQ 119

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRG 178
           P  +DWR +GAVT VKNQ SCGCCW FS VAAVEGI +I TG L+SL+            
Sbjct: 120 PAEVDWRQQGAVTGVKNQRSCGCCWAFSTVAAVEGIHQITTGELVSLT------------ 167

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQ---RGAMKAARIRSYQDV-PTSE 234
               W   A S           R Y YQ  +G C +      +  AA I  YQ V P  E
Sbjct: 168 ----WPTAAAS--------PPRRAYAYQGAQGACQFDASSSASGVAATISGYQRVNPNDE 215

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVF-AGPCGNNLNHAVTIVGYGSSNEGP---- 289
            +L  AV+ QPVSVAI+ S   FR+Y  GVF A  CG  L+HAV +VGYG+  +G     
Sbjct: 216 GSLAAAVASQPVSVAIEGSGAMFRHYGSGVFTADSCGTKLDHAVAVVGYGAEADGSGGGG 275

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           YW+IKNSWG  WG+GG++++ +DVG  G CG+A   SYP+
Sbjct: 276 YWIIKNSWGTTWGDGGYMKLEKDVGSQGACGVAMAPSYPV 315


>gi|303283194|ref|XP_003060888.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457239|gb|EEH54538.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 422

 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 146/322 (45%), Positives = 197/322 (61%), Gaps = 18/322 (5%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFAD 77
           +I A+ + W+A   + Y    E+A R  IF  N  F+   N     G +++ L LN  AD
Sbjct: 65  TIEARFDRWLATHGKAYACPKERAKRLAIFADNAEFVRVHNEAHAAGKKSHWLRLNHLAD 124

Query: 78  LTDEEFIASHTGYKMPTRNISNQSQSY-ANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQ 136
           LT EEF     GY    + + + S    A NW  Y D     P ++DW +RGAVTPVKNQ
Sbjct: 125 LTREEF-KHMLGYDASKKRVESSSPPVDAANW-EYADVTP--PETMDWVSRGAVTPVKNQ 180

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIR 193
           G CG CW FS V AVEG+  ++TG LISLSEQ+++ C+   G+ GC GG MD+ F +I+ 
Sbjct: 181 GQCGSCWAFSTVGAVEGVVAVKTGDLISLSEQELVSCAKIGGNNGCKGGLMDNGFEWIVE 240

Query: 194 SQGLTDERVYPYQRREGYCNW-QRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAID 251
           ++G+ DE  + Y  ++  CNW ++   KAA I  ++DVP   E AL+ AVS+QPV+VAI+
Sbjct: 241 NRGVDDEEDWGYLAKDRRCNWFKKRRAKAASIDGFKDVPRNDEDALKKAVSQQPVAVAIE 300

Query: 252 ASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYG----SSNEGPYWLIKNSWGQNWGEGGFI 307
           A    F+ YSGGVF G CG NL+H V +VGYG    S+    YW +KNSWG  WGE G+I
Sbjct: 301 ADHREFQLYSGGVFDGECGTNLDHGVLVVGYGYDGESAGHKHYWTVKNSWGAKWGEEGYI 360

Query: 308 RMRR-DVGGAGLCGIARKASYP 328
           R+ R  +G AG CG+A +ASYP
Sbjct: 361 RIARGGMGPAGQCGVAMQASYP 382


>gi|413943290|gb|AFW75939.1| maize insect resistance1 [Zea mays]
          Length = 435

 Score =  252 bits (643), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 134/299 (44%), Positives = 187/299 (62%), Gaps = 8/299 (2%)

Query: 38  KNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT 94
           + + ++ +R ++F+ N R+I+K N E   G  T++L L  FADLT +E+     G++   
Sbjct: 109 EQEEDRRLRLEVFRDNLRYIDKHNAEADAGLHTFRLGLTPFADLTLDEYRGRVLGFRA-R 167

Query: 95  RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGI 154
              S     + + +   P     LP +IDWR  GAVT VK+Q  CG CW FSAVAA+EGI
Sbjct: 168 ARRSGARYGHGHGYRARPRGGDLLPDAIDWRQLGAVTEVKDQQQCGGCWAFSAVAAIEGI 227

Query: 155 TKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCN 213
             I TG L+SLSEQ+++DC     GC GG M++AF ++I + G+  E  YP+   +G C+
Sbjct: 228 NAIATGNLVSLSEQEIIDCDAQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCD 287

Query: 214 WQR-GAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGN 271
             +    K A I    +V ++ E AL+ AV+ QPVSVAIDAS   F++YS G+F GPCG 
Sbjct: 288 ASKENNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDASGRAFQHYSSGIFNGPCGT 347

Query: 272 NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPI 329
           +L+H VT VGYGS +   YW++KNSW  +WGE G+IRMRR+V    G CGIA  ASYP+
Sbjct: 348 SLDHGVTAVGYGSESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYPV 406


>gi|307110445|gb|EFN58681.1| hypothetical protein CHLNCDRAFT_56822 [Chlorella variabilis]
          Length = 466

 Score =  252 bits (643), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 132/310 (42%), Positives = 184/310 (59%), Gaps = 14/310 (4%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           + W+    R Y +  E   RF ++  N RF+ ++N  G+ ++ LS+  +ADL+ +E+ + 
Sbjct: 41  DFWVQTLKRAYASAEEYERRFDVWLDNLRFVHEYN-AGHTSHWLSMGVYADLSQDEYRSK 99

Query: 87  HTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFS 146
             GY        ++ +      F Y  +    P+ +DW A+GAVTPVKNQ  CG CW FS
Sbjct: 100 ALGYNADL----HEERPLRAAPFLYEGTVP--PKEVDWVAKGAVTPVKNQLLCGSCWAFS 153

Query: 147 AVAAVEGITKIRTGRLISLSEQQVLDCSGSR--GCYGGWMDDAFSYIIRSQGLTDERVYP 204
              AVEG + I TG+L SLSEQ ++DC   R  GC+GG MD AF +I+++ G+  E  YP
Sbjct: 154 TTGAVEGASAIATGKLASLSEQMLVDCDRERDNGCHGGLMDFAFEFIMKNGGIDTEDDYP 213

Query: 205 YQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGFRYYSGG 263
           Y   EG C   +       I  YQDV P  E AL  AV+ QPVSVAI+A    F+ Y GG
Sbjct: 214 YTAEEGMCQDNKMRRHVVTIDDYQDVPPNDEHALMKAVANQPVSVAIEADQRAFQLYGGG 273

Query: 264 VFAGPCGNNLNHAVTIVGYGSSNEG----PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLC 319
           VF   CG  L+H V +VGYG+++ G    PYWL+KNSWG  WG+ G+IR+ R++G  G C
Sbjct: 274 VFDAECGTALDHGVLVVGYGTASNGTHHLPYWLVKNSWGAEWGDKGYIRLLRNLGEEGQC 333

Query: 320 GIARKASYPI 329
           G+A +AS+PI
Sbjct: 334 GVAMQASFPI 343


>gi|18408616|ref|NP_566901.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|75313880|sp|Q9STL5.1|CEP3_ARATH RecName: Full=KDEL-tailed cysteine endopeptidase CEP3; Flags:
           Precursor
 gi|4678353|emb|CAB41163.1| cysteine endopeptidase precursor-like protein [Arabidopsis
           thaliana]
 gi|26453052|dbj|BAC43602.1| putative cysteine endopeptidase precursor [Arabidopsis thaliana]
 gi|332644885|gb|AEE78406.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 364

 Score =  252 bits (643), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 138/342 (40%), Positives = 199/342 (58%), Gaps = 17/342 (4%)

Query: 1   MLIIMVTWASLVMSRT---LHEDSISAKHELW-MAQSARTYKNQA----EKAMRFKIFKK 52
             I+++++ SL+ +       E  +  +  +W + +  R + + +    E   RF +F+ 
Sbjct: 4   FFIVLISFLSLLQASKGFDFDEKELETEENVWKLYERWRGHHSVSRASHEAIKRFNVFRH 63

Query: 53  NFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYP 112
           N   + + N++ N+ YKL +N FAD+T  EF +S+ G  +    +  +     +  F Y 
Sbjct: 64  NVLHVHRTNKK-NKPYKLKINRFADITHHEFRSSYAGSNVKHHRML-RGPKRGSGGFMYE 121

Query: 113 DSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLD 172
           +  R +P S+DWR +GAVT VKNQ  CG CW FS VAAVEGI KIRT +L+SLSEQ+++D
Sbjct: 122 NVTR-VPSSVDWREKGAVTEVKNQQDCGSCWAFSTVAAVEGINKIRTNKLVSLSEQELVD 180

Query: 173 CSG--SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRRE-GYCNWQRGAMKAARIRSYQD 229
           C    ++GC GG M+ AF +I  + G+  E  YPY   +  +C       +   I  ++ 
Sbjct: 181 CDTEENQGCAGGLMEPAFEFIKNNGGIKTEETYPYDSSDVQFCRANSIGGETVTIDGHEH 240

Query: 230 VP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG 288
           VP   E  L  AV+ QPVSVAIDA S  F+ YS GVF G CG  LNH V IVGYG +  G
Sbjct: 241 VPENDEEELLKAVAHQPVSVAIDAGSSDFQLYSEGVFIGECGTQLNHGVVIVGYGETKNG 300

Query: 289 -PYWLIKNSWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYP 328
             YW+++NSWG  WGEGG++R+ R +    G CGIA +ASYP
Sbjct: 301 TKYWIVRNSWGPEWGEGGYVRIERGISENEGRCGIAMEASYP 342


>gi|332220191|ref|XP_003259241.1| PREDICTED: cathepsin K [Nomascus leucogenys]
          Length = 329

 Score =  252 bits (643), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 143/326 (43%), Positives = 198/326 (60%), Gaps = 18/326 (5%)

Query: 12  VMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQT 67
           VMS  L+ + I   H ELW     + Y N+ ++  R  I++KN ++I   N E   G  T
Sbjct: 11  VMSFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHT 70

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           Y+L++N   D+T EE +   TG K+P       S S +N+    PD     P S+D+R +
Sbjct: 71  YELAMNHLGDMTSEEVVQKMTGLKVPP------SHSRSNDTLYIPDWEGRAPDSVDYRKK 124

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDD 186
           G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + GC GG+M +
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 184

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ- 244
           AF Y+ +++G+  E  YPY  +E  C +     KAA+ R Y+++P  +E AL+ AV+R  
Sbjct: 185 AFQYVQKNRGIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVG 243

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
           PVSVAIDAS   F++YS GV+     N  NLNHAV  VGYG      +W+IKNSWG+NWG
Sbjct: 244 PVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 303

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYP 328
             G+I M R+   A  CGIA  AS+P
Sbjct: 304 NKGYILMARNKNNA--CGIANLASFP 327


>gi|302763837|ref|XP_002965340.1| hypothetical protein SELMODRAFT_143126 [Selaginella moellendorffii]
 gi|302790566|ref|XP_002977050.1| hypothetical protein SELMODRAFT_232903 [Selaginella moellendorffii]
 gi|300155026|gb|EFJ21659.1| hypothetical protein SELMODRAFT_232903 [Selaginella moellendorffii]
 gi|300167573|gb|EFJ34178.1| hypothetical protein SELMODRAFT_143126 [Selaginella moellendorffii]
          Length = 300

 Score =  252 bits (643), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 131/313 (41%), Positives = 183/313 (58%), Gaps = 29/313 (9%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           E W A+  ++Y +  EKA R  IF     +IEK N   N T+ L LN+F+DLT+ EF A+
Sbjct: 3   EGWAAKHGKSYSSDWEKARRLMIFSDTLAYIEKHNALPNTTFTLGLNKFSDLTNAEFRAN 62

Query: 87  HTGYKMPTRNISNQSQSYANNWFGYPDSR---------RGLPRSIDWRARGAVTPVKNQG 137
           + G   P R               Y D R           LP S+DWR  GAVTP+K+QG
Sbjct: 63  YVGKFKPPR---------------YQDRRPAKDVDVDVSSLPTSLDWRQEGAVTPIKDQG 107

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQG 196
            CG CW FSA+A++E    + T  L+SLSEQQ++DC    +GC GG+ +DAF +++ + G
Sbjct: 108 QCGSCWAFSAIASIESAHFLATKELVSLSEQQLIDCDTVDQGCQGGFPEDAFKFVVENGG 167

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSP 255
           +T E  YPY    G CN  +   K   I  Y+DV   S  AL  AVS+ PV+V I  S  
Sbjct: 168 VTTEEAYPYTGFAGSCNANKN--KVVEITGYKDVTKDSADALMKAVSKTPVTVGICGSDQ 225

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG 315
            F+ Y  G+ +G C N+ +HAV ++GYG+    PYW+IKNSWG +WGE GF+R++++  G
Sbjct: 226 NFQNYRSGILSGHCSNSRDHAVLVIGYGTEGGMPYWIIKNSWGTSWGEDGFMRIKKE-DG 284

Query: 316 AGLCGIARKASYP 328
            G+CG+  ++SYP
Sbjct: 285 EGMCGMNGQSSYP 297


>gi|417409876|gb|JAA51427.1| Putative cathepsin s, partial [Desmodus rotundus]
          Length = 342

 Score =  251 bits (642), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 143/341 (41%), Positives = 206/341 (60%), Gaps = 29/341 (8%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           L++++   S  M++ LH+D    +H +LW     + YK + E+ +R  I++KN +F+   
Sbjct: 15  LVLVLLGCSSAMAQ-LHKDPTLDRHWDLWKKTYGKQYKEKNEEGVRRLIWEKNLKFVMLH 73

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPDS 114
           N E   G  +Y L +N   D+T EE  A  +  ++P+   RN++ +S          P+ 
Sbjct: 74  NLEHSMGMHSYDLGMNHLGDMTSEEVTALMSSLRVPSQWQRNVTYKSN---------PNQ 124

Query: 115 RRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS 174
           +  LP S+DWR +G VT VK QGSCG CW FSAV A+E   K++TG+L+SLS Q ++DCS
Sbjct: 125 K--LPDSVDWRDKGCVTDVKYQGSCGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCS 182

Query: 175 ----GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV 230
                +RGC GG+M +AF YII + G+  E  YPY+  +G C +     +AA    Y ++
Sbjct: 183 VGKYSNRGCNGGFMTEAFQYIIDNNGIESEASYPYKAMDGKCQYD-SKYRAATCSRYTEL 241

Query: 231 P-TSELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNE 287
           P  SE AL+ AV+ + PVSVAIDAS P F  Y  GV+  P C  ++NH V +VGYG+ N 
Sbjct: 242 PEDSEDALKEAVANKGPVSVAIDASHPSFFLYRSGVYYDPACTLHVNHGVLVVGYGNLNG 301

Query: 288 GPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
             YWL+KNSWG ++G+ G+IRM R+ G    CGIA  ASYP
Sbjct: 302 KDYWLVKNSWGLHFGDQGYIRMARNSGNH--CGIASYASYP 340


>gi|413944252|gb|AFW76901.1| hypothetical protein ZEAMMB73_101481 [Zea mays]
          Length = 232

 Score =  251 bits (642), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 119/221 (53%), Positives = 156/221 (70%), Gaps = 8/221 (3%)

Query: 114 SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
           S   +P +IDWR  GAVTP+K+QG CGCCW FSAVAA EGI KI TG+LISLSEQ+++DC
Sbjct: 12  SVDAIPATIDWRTNGAVTPIKDQGQCGCCWAFSAVAATEGIVKISTGKLISLSEQELVDC 71

Query: 174 S---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV 230
                 +GC GG MDDAF +II++ GLT E  YPY   +G C  + G+  AA I+ Y+DV
Sbjct: 72  DVYGEDQGCEGGLMDDAFKFIIKNGGLTTESNYPYTAADGKC--KSGSNSAANIKGYEDV 129

Query: 231 PTS-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP 289
           PT+ E AL  AV+ QPVSVA+D     F++YSGGV  G CG +L+H +  +GYG +++G 
Sbjct: 130 PTNDEAALMKAVANQPVSVAVDGGDMTFQFYSGGVMTGSCGTDLDHGIAAIGYGKTSDGT 189

Query: 290 -YWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
            YWL+KNSWG  WGE G++RM +D+    G+CG+A + SYP
Sbjct: 190 KYWLMKNSWGTTWGENGYLRMEKDISDKKGMCGLAIEPSYP 230


>gi|297809383|ref|XP_002872575.1| hypothetical protein ARALYDRAFT_911472 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318412|gb|EFH48834.1| hypothetical protein ARALYDRAFT_911472 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 371

 Score =  251 bits (642), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 133/308 (43%), Positives = 186/308 (60%), Gaps = 14/308 (4%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEF-IASH 87
           WM +  + Y + AEK  R  IF+ N RFI   N E N +Y+L L +FADL+  E+    H
Sbjct: 59  WMVKHGKVYGSVAEKERRLTIFEDNLRFISNRNAE-NLSYRLGLTQFADLSLHEYGEVCH 117

Query: 88  TGYKMPTRN--ISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIF 145
                P RN      S  Y  +      +   LP+S+DWR  GAVT VK+QG C  CW F
Sbjct: 118 GADPRPPRNHVFMTSSDRYKTS------AGDVLPKSVDWRNEGAVTEVKDQGHCRSCWAF 171

Query: 146 SAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQGLTDERVYP 204
           S V AVEG+ KI TG L++LSEQ +++C+  + GC GG ++ A+ +I+++ GL  +  YP
Sbjct: 172 STVGAVEGLNKIVTGELVTLSEQDLINCNKENNGCGGGKVETAYEFIMKNGGLGTDNDYP 231

Query: 205 YQRREGYCNWQ-RGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYSG 262
           Y+   G C+ + +   K   I  ++++P + E AL  AV+ QPV+  ID+SS  F+ Y  
Sbjct: 232 YKAVNGVCDGRLKENNKNVMIDGFENLPANDEFALMKAVAHQPVTAVIDSSSREFQLYES 291

Query: 263 GVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGI 321
           GVF G CG NLNH V +VGYG+ N   YWL+KNS G  WGE G+++M R++    GLCGI
Sbjct: 292 GVFDGSCGTNLNHGVVVVGYGTENGRDYWLVKNSRGNTWGEAGYMKMARNIANPRGLCGI 351

Query: 322 ARKASYPI 329
           A +ASYP+
Sbjct: 352 AMRASYPL 359


>gi|413953665|gb|AFW86314.1| hypothetical protein ZEAMMB73_546353 [Zea mays]
          Length = 233

 Score =  251 bits (642), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 117/221 (52%), Positives = 156/221 (70%), Gaps = 8/221 (3%)

Query: 114 SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
           S   LP +IDWR +GAVTP+K+QG CGCCW FSAVAA EGI KI TG+L+SL+EQ+++DC
Sbjct: 13  SADALPTTIDWRTKGAVTPIKDQGQCGCCWAFSAVAATEGIVKISTGKLVSLAEQELVDC 72

Query: 174 ---SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV 230
                 +GC GG MDDAF +II++ GLT E  YPY   +G C  + G+  AA I+ Y+DV
Sbjct: 73  DVHDEDQGCEGGLMDDAFKFIIKNGGLTTESSYPYTAADGKC--KSGSNSAATIKGYEDV 130

Query: 231 PTS-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP 289
           P + E AL  AV+ QPVSVA+D     F++YSGGV  G CG +L+H +  +GYG +++G 
Sbjct: 131 PANDEAALMKAVANQPVSVAVDGGDMTFQFYSGGVMTGSCGTDLDHGIAAIGYGKTSDGT 190

Query: 290 -YWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYP 328
            YWL+KNSWG  WGE G++RM +D+    G+CG+A + SYP
Sbjct: 191 KYWLMKNSWGTTWGENGYLRMEKDISDKRGMCGLAMEPSYP 231


>gi|359359068|gb|AEV40975.1| putative cysteine protease [Oryza punctata]
          Length = 464

 Score =  251 bits (641), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 149/332 (44%), Positives = 204/332 (61%), Gaps = 23/332 (6%)

Query: 12  VMSRTLHEDSISAKHELWMAQSARTYKNQ----AEKAMRFKIFKKNFRFIEKFNR--EGN 65
           V+ RT  E    A ++LW+A+      +      E   RF++F  N +F++  N   +G+
Sbjct: 54  VVERT--EAEARAVYDLWVARHRHGGGSHNGFVGEYERRFRVFWDNLKFVDAHNAHADGH 111

Query: 66  QTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWR 125
             ++L +N FADLT++EF A++ G   P     +  + Y +      D    LP S+DWR
Sbjct: 112 GGFRLGMNRFADLTNDEFRAAYLG-TTPAGRGRHVGEMYRH------DGVEALPDSVDWR 164

Query: 126 ARGAV-TPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYG 181
            +GAV +PVKNQG CG CW FSAVAAVEGI KI TG L+SLSEQ++++C+   G+ GC G
Sbjct: 165 DKGAVVSPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECARNGGNSGCNG 224

Query: 182 GWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYA 240
           G MDDAF++I R+ GL  E  YPY   +G C+  + + K   I  ++DVP   EL+L+ A
Sbjct: 225 GIMDDAFAFITRNGGLDTEEDYPYTAMDGKCDLAKKSRKVVSIDGFEDVPENDELSLQKA 284

Query: 241 VSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGS--SNEGPYWLIKNSWG 298
           V+ QPVSVAIDA    F+ Y  GVF G CG +L+H V  VGYG+  +    YW ++NSWG
Sbjct: 285 VAHQPVSVAIDAGGREFQLYDSGVFTGRCGTSLDHGVVAVGYGTDAATGTDYWTVRNSWG 344

Query: 299 QNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
            +WGE G+IRM R+V    G CGIA  ASYPI
Sbjct: 345 PDWGENGYIRMERNVTARTGKCGIAMMASYPI 376


>gi|18413505|ref|NP_567376.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|30315954|sp|Q9SUT0.1|CPR3_ARATH RecName: Full=Probable cysteine proteinase At4g11310; Flags:
           Precursor
 gi|5596477|emb|CAB51415.1| drought-inducible cysteine proteinase RD21A precursor-like protein
           [Arabidopsis thaliana]
 gi|7267830|emb|CAB81232.1| drought-inducible cysteine proteinase RD21A precursor-like protein
           [Arabidopsis thaliana]
 gi|332657595|gb|AEE82995.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 364

 Score =  251 bits (641), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 135/310 (43%), Positives = 186/310 (60%), Gaps = 14/310 (4%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFI-A 85
           E WM +  + Y + AEK  R  IF+ N RFI   N E N +Y+L L  FADL+  E+   
Sbjct: 50  ESWMVKHGKVYGSVAEKERRLTIFEDNLRFINNRNAE-NLSYRLGLTGFADLSLHEYKEV 108

Query: 86  SHTGYKMPTRN--ISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCW 143
            H     P RN      S  Y  +      +   LP+S+DWR  GAVT VK+QG C  CW
Sbjct: 109 CHGADPRPPRNHVFMTSSDRYKTS------ADDVLPKSVDWRNEGAVTEVKDQGHCRSCW 162

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQGLTDERV 202
            FS V AVEG+ KI TG L++LSEQ +++C+  + GC GG ++ A+ +I+++ GL  +  
Sbjct: 163 AFSTVGAVEGLNKIVTGELVTLSEQDLINCNKENNGCGGGKLETAYEFIMKNGGLGTDND 222

Query: 203 YPYQRREGYCNWQ-RGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYY 260
           YPY+   G C+ + +   K   I  Y+++P + E AL  AV+ QPV+  ID+SS  F+ Y
Sbjct: 223 YPYKAVNGVCDGRLKENNKNVMIDGYENLPANDESALMKAVAHQPVTAVIDSSSREFQLY 282

Query: 261 SGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLC 319
             GVF G CG NLNH V +VGYG+ N   YWL+KNS G  WGE G+++M R++    GLC
Sbjct: 283 ESGVFDGSCGTNLNHGVVVVGYGTENGRDYWLVKNSRGITWGEAGYMKMARNIANPRGLC 342

Query: 320 GIARKASYPI 329
           GIA +ASYP+
Sbjct: 343 GIAMRASYPL 352


>gi|20260334|gb|AAM13065.1| drought-inducible cysteine proteinase RD21A precursor-like protein
           [Arabidopsis thaliana]
 gi|23197782|gb|AAN15418.1| drought-inducible cysteine proteinase RD21A precursor-like protein
           [Arabidopsis thaliana]
          Length = 357

 Score =  251 bits (641), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 135/310 (43%), Positives = 186/310 (60%), Gaps = 14/310 (4%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFI-A 85
           E WM +  + Y + AEK  R  IF+ N RFI   N E N +Y+L L  FADL+  E+   
Sbjct: 43  ESWMVKHGKVYGSVAEKERRLTIFEDNLRFINNRNAE-NLSYRLGLTGFADLSLHEYKEV 101

Query: 86  SHTGYKMPTRN--ISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCW 143
            H     P RN      S  Y  +      +   LP+S+DWR  GAVT VK+QG C  CW
Sbjct: 102 CHGADPRPPRNHVFMTSSDRYKTS------ADDVLPKSVDWRNEGAVTEVKDQGHCRSCW 155

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQGLTDERV 202
            FS V AVEG+ KI TG L++LSEQ +++C+  + GC GG ++ A+ +I+++ GL  +  
Sbjct: 156 AFSTVGAVEGLNKIVTGELVTLSEQDLINCNKENNGCGGGKLETAYEFIMKNGGLGTDND 215

Query: 203 YPYQRREGYCNWQ-RGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYY 260
           YPY+   G C+ + +   K   I  Y+++P + E AL  AV+ QPV+  ID+SS  F+ Y
Sbjct: 216 YPYKAVNGVCDGRLKENNKNVMIDGYENLPANDESALMKAVAHQPVTAVIDSSSREFQLY 275

Query: 261 SGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLC 319
             GVF G CG NLNH V +VGYG+ N   YWL+KNS G  WGE G+++M R++    GLC
Sbjct: 276 ESGVFDGSCGTNLNHGVVVVGYGTENGRDYWLVKNSRGITWGEAGYMKMARNIANPRGLC 335

Query: 320 GIARKASYPI 329
           GIA +ASYP+
Sbjct: 336 GIAMRASYPL 345


>gi|395729888|ref|XP_002810309.2| PREDICTED: cathepsin K [Pongo abelii]
          Length = 343

 Score =  251 bits (640), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 142/326 (43%), Positives = 198/326 (60%), Gaps = 18/326 (5%)

Query: 12  VMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQT 67
           V+S  L+ + I   H ELW     + Y N+ ++  R  I++KN ++I   N E   G  T
Sbjct: 25  VVSFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHT 84

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           Y+L++N   D+T EE +   TG K+P       S S +N+    PD     P S+D+R +
Sbjct: 85  YELAMNHLGDMTSEEVVQKMTGLKVPL------SHSRSNDTLYIPDWEGRAPDSVDYRKK 138

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDD 186
           G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + GC GG+M +
Sbjct: 139 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 198

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ- 244
           AF Y+ +++G+  E  YPY  +E  C +     KAA+ R Y+++P  +E AL+ AV+R  
Sbjct: 199 AFQYVQKNRGIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVG 257

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
           PVSVAIDAS   F++YS GV+     N  NLNHAV  VGYG      +W+IKNSWG+NWG
Sbjct: 258 PVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 317

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYP 328
             G+I M R+   A  CGIA  AS+P
Sbjct: 318 NKGYILMARNKNNA--CGIANLASFP 341


>gi|397492864|ref|XP_003817340.1| PREDICTED: cathepsin K [Pan paniscus]
          Length = 343

 Score =  251 bits (640), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 142/326 (43%), Positives = 198/326 (60%), Gaps = 18/326 (5%)

Query: 12  VMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQT 67
           V+S  L+ + I   H ELW     + Y N+ ++  R  I++KN ++I   N E   G  T
Sbjct: 25  VVSFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHT 84

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           Y+L++N   D+T EE +   TG K+P       S S +N+    PD     P S+D+R +
Sbjct: 85  YELAMNHLGDMTSEEVVQKMTGLKVPL------SHSRSNDTLYIPDWEGRAPDSVDYRKK 138

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDD 186
           G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + GC GG+M +
Sbjct: 139 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 198

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ- 244
           AF Y+ +++G+  E  YPY  +E  C +     KAA+ R Y+++P  +E AL+ AV+R  
Sbjct: 199 AFQYVQKNRGIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVG 257

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
           PVSVAIDAS   F++YS GV+     N  NLNHAV  VGYG      +W+IKNSWG+NWG
Sbjct: 258 PVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 317

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYP 328
             G+I M R+   A  CGIA  AS+P
Sbjct: 318 NKGYILMARNKNNA--CGIANLASFP 341


>gi|302790570|ref|XP_002977052.1| hypothetical protein SELMODRAFT_268054 [Selaginella moellendorffii]
 gi|300155028|gb|EFJ21661.1| hypothetical protein SELMODRAFT_268054 [Selaginella moellendorffii]
          Length = 300

 Score =  251 bits (640), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 131/313 (41%), Positives = 182/313 (58%), Gaps = 29/313 (9%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           E W A+  ++Y +  EKA R  IF     +IEK N   N T+ L LN+F+DLT+ EF A+
Sbjct: 3   EGWAAKHGKSYSSDWEKARRLMIFSDTLAYIEKHNALPNTTFTLGLNKFSDLTNAEFRAN 62

Query: 87  HTGYKMPTRNISNQSQSYANNWFGYPDSR---------RGLPRSIDWRARGAVTPVKNQG 137
           + G   P R               Y D R           LP S+DWR  GAVTP+K+QG
Sbjct: 63  YVGKFKPPR---------------YQDRRPAKDVDVDVSSLPTSLDWRQEGAVTPIKDQG 107

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQG 196
            CG CW FSA+A++E    + T  L+SLSEQQ++DC    +GC GG+ +DAF +++ + G
Sbjct: 108 QCGSCWAFSAIASIESAHFLATKELVSLSEQQLIDCDTVDQGCQGGFPEDAFKFVVENGG 167

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSP 255
           +T E  YPY    G CN  +   K   I  Y+DV   S  AL  AVS+ PV+V I  S  
Sbjct: 168 VTTEEAYPYTGFAGSCNANKN--KVVEITGYKDVTKDSADALMKAVSKTPVTVGICGSDQ 225

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG 315
            F+ Y  G+ +G C N+ +HAV ++GYG+    PYW+IKNSWG +WGE GF+R+++   G
Sbjct: 226 NFQNYRSGILSGHCSNSRDHAVLVIGYGTEGGMPYWIIKNSWGTSWGEDGFMRIKKK-DG 284

Query: 316 AGLCGIARKASYP 328
            G+CG+  ++SYP
Sbjct: 285 EGMCGMNGQSSYP 297


>gi|74136185|ref|NP_001027984.1| cathepsin K precursor [Macaca mulatta]
 gi|47117667|sp|P61276.1|CATK_MACFA RecName: Full=Cathepsin K; Flags: Precursor
 gi|47117668|sp|P61277.1|CATK_MACMU RecName: Full=Cathepsin K; Flags: Precursor
 gi|3236470|gb|AAC23694.1| cathepsin K [Macaca fascicularis]
 gi|4927694|gb|AAD33249.1| cathepsin K [Macaca mulatta]
 gi|355558400|gb|EHH15180.1| hypothetical protein EGK_01237 [Macaca mulatta]
 gi|355763132|gb|EHH62118.1| hypothetical protein EGM_20317 [Macaca fascicularis]
 gi|380809978|gb|AFE76864.1| cathepsin K preproprotein [Macaca mulatta]
 gi|383416065|gb|AFH31246.1| cathepsin K preproprotein [Macaca mulatta]
 gi|384945478|gb|AFI36344.1| cathepsin K preproprotein [Macaca mulatta]
          Length = 329

 Score =  251 bits (640), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 142/326 (43%), Positives = 199/326 (61%), Gaps = 18/326 (5%)

Query: 12  VMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQT 67
           VMS  L+ + I   H ELW     + Y ++ ++  R  I++KN ++I   N E   G  T
Sbjct: 11  VMSFALYPEEILDTHWELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHT 70

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           Y+L++N   D+T+EE +   TG K+P       S S +N+    PD     P S+D+R +
Sbjct: 71  YELAMNHLGDMTNEEVVQKMTGLKVPA------SHSRSNDTLYIPDWEGRAPDSVDYRKK 124

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDD 186
           G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + GC GG+M +
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 184

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ- 244
           AF Y+ +++G+  E  YPY  +E  C +     KAA+ R Y+++P  +E AL+ AV+R  
Sbjct: 185 AFQYVQKNRGIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVG 243

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
           PVSVAIDAS   F++YS GV+     N  NLNHAV  VGYG      +W+IKNSWG+NWG
Sbjct: 244 PVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 303

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYP 328
             G+I M R+   A  CGIA  AS+P
Sbjct: 304 NKGYILMARNKNNA--CGIANLASFP 327


>gi|115438530|ref|NP_001043562.1| Os01g0613500 [Oryza sativa Japonica Group]
 gi|11034572|dbj|BAB17096.1| cysteine proteinase-like [Oryza sativa Japonica Group]
 gi|113533093|dbj|BAF05476.1| Os01g0613500 [Oryza sativa Japonica Group]
 gi|215697766|dbj|BAG91959.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 360

 Score =  251 bits (640), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 147/324 (45%), Positives = 187/324 (57%), Gaps = 19/324 (5%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREG-NQTYKLSLNEFADLT 79
           S++A+HE WMA+  R Y + AEKA R ++F  N   ++  NR G ++TY L LN+F+DLT
Sbjct: 38  SMAARHERWMARFGRAYADAAEKARRMEVFAANAERVDAANRAGGDRTYTLGLNQFSDLT 97

Query: 80  DEEFIASHTGYK-MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
           D+EF  +H GY   P            N           +P S+DWRARGAVT VKNQ S
Sbjct: 98  DDEFAQTHLGYSWAPPPPSHRHGHRAENGTAAAAADDTDVPDSVDWRARGAVTEVKNQRS 157

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-GSRGCYGGWMDDAFSYIIRSQGL 197
           CG CW F+AVAA EG+ ++ TG L+SLSEQQVLDC+ G+  C GG +  A  YI  S GL
Sbjct: 158 CGSCWAFAAVAATEGLVQLATGNLVSLSEQQVLDCTGGANTCSGGDVSAALRYIAASGGL 217

Query: 198 TDERVYPYQRREGYCNW-------QRGAMKAAR-IRSYQDVPTSELALRYAVSRQPVSVA 249
             E  Y Y  ++G C            A+  AR  R Y D    E AL+   + QPV V 
Sbjct: 218 QTEAAYAYGGQQGACRAGGFAAPNSAAAVGGARWARLYGD----EGALQALAAGQPVVVV 273

Query: 250 IDASSPGFRYYSGGVFAG--PCGNNLNHAVTIV--GYGSSNEGPYWLIKNSWGQNWGEGG 305
           ++AS P FR+Y  GV+AG   CG  LNHAVT+V  G  +   G YWL+KN WG  WGEGG
Sbjct: 274 VEASEPDFRHYRSGVYAGSAACGRRLNHAVTVVGYGAAADGGGEYWLVKNQWGTWWGEGG 333

Query: 306 FIRMRRDVGGAGLCGIARKASYPI 329
           ++R+ R     G CGIA  A YP 
Sbjct: 334 YMRVARGGAAGGNCGIATYAFYPT 357


>gi|2507252|sp|P14080.2|PAPA2_CARPA RecName: Full=Chymopapain; AltName: Full=Papaya proteinase II;
           Short=PPII; Flags: Precursor
 gi|1332461|emb|CAA66378.1| chymopapain [Carica papaya]
          Length = 352

 Score =  251 bits (640), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 129/304 (42%), Positives = 187/304 (61%), Gaps = 9/304 (2%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           WM +  + Y++  EK  RF+IF+ N  +I++ N++ N +Y L LN FADL+++EF   + 
Sbjct: 51  WMLKHNKIYESIDEKIYRFEIFRDNLMYIDETNKK-NNSYWLGLNGFADLSNDEFKKKYV 109

Query: 89  GYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAV 148
           G+           + + N  F Y       P+SIDWRA+GAVTPVKNQG+CG CW FS +
Sbjct: 110 GF---VAEDFTGLEHFDNEDFTYKHVTN-YPQSIDWRAKGAVTPVKNQGACGSCWAFSTI 165

Query: 149 AAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQR 207
           A VEGI KI TG L+ LSEQ+++DC   S GC GG+   +  Y+  + G+   +VYPYQ 
Sbjct: 166 ATVEGINKIVTGNLLELSEQELVDCDKHSYGCKGGYQTTSLQYV-ANNGVHTSKVYPYQA 224

Query: 208 REGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFA 266
           ++  C          +I  Y+ VP++ E +   A++ QP+SV ++A    F+ Y  GVF 
Sbjct: 225 KQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGVFD 284

Query: 267 GPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKA 325
           GPCG  L+HAVT VGYG+S+   Y +IKNSWG NWGE G++R++R  G + G CG+ + +
Sbjct: 285 GPCGTKLDHAVTAVGYGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSS 344

Query: 326 SYPI 329
            YP 
Sbjct: 345 YYPF 348


>gi|333069454|gb|AEF13978.1| chymopapain [Carica papaya]
          Length = 352

 Score =  250 bits (639), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 129/304 (42%), Positives = 184/304 (60%), Gaps = 9/304 (2%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           WM +  + Y++  EK  RF+IF+ N  +I++ N++ N +Y L LN FADL+++EF   + 
Sbjct: 51  WMLKHNKIYESIDEKIYRFEIFRDNLMYIDETNKK-NNSYWLGLNGFADLSNDEFKKKYV 109

Query: 89  GYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAV 148
           G            + + N  F Y       P+SIDWRA+GAVTPVKNQGSCG CW FS +
Sbjct: 110 G---SVAEDFTGLEHFDNEDFTYKHVTN-YPQSIDWRAKGAVTPVKNQGSCGSCWAFSTI 165

Query: 149 AAVEGITKIRTGRLISLSEQQVLDCS-GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQR 207
           A VEG+ KI TG L+ LSEQ+++DC   S GC GG+   +  Y +   G+   +VYPYQ 
Sbjct: 166 ATVEGVNKIVTGNLLELSEQELVDCDKNSHGCKGGYQTTSLQY-VADNGVHTSKVYPYQA 224

Query: 208 REGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFA 266
           +   C          +I  Y+ VP++ E +   A++ QP+SV ++A    F+ Y  GVF 
Sbjct: 225 KAMQCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGVFD 284

Query: 267 GPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKA 325
           GPCG  L+HAVT VGYG+S+   Y +IKNSWG NWGE G++R++R  G + G CG+ + +
Sbjct: 285 GPCGTKLDHAVTAVGYGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSS 344

Query: 326 SYPI 329
            YP 
Sbjct: 345 YYPF 348


>gi|426331364|ref|XP_004026652.1| PREDICTED: cathepsin K [Gorilla gorilla gorilla]
          Length = 329

 Score =  250 bits (639), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 142/326 (43%), Positives = 198/326 (60%), Gaps = 18/326 (5%)

Query: 12  VMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQT 67
           V+S  L+ + I   H ELW     + Y N+ ++  R  I++KN ++I   N E   G  T
Sbjct: 11  VVSFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHT 70

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           Y+L++N   D+T EE +   TG K+P       S S +N+    PD     P S+D+R +
Sbjct: 71  YELAMNHLGDMTSEEVVQKMTGLKVPL------SHSRSNDTLYIPDWEGRAPDSVDYRKK 124

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDD 186
           G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + GC GG+M +
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 184

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ- 244
           AF Y+ +++G+  E  YPY  +E  C +     KAA+ R Y+++P  +E AL+ AV+R  
Sbjct: 185 AFQYVQKNRGIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVG 243

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
           PVSVAIDAS   F++YS GV+     N  NLNHAV  VGYG      +W+IKNSWG+NWG
Sbjct: 244 PVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 303

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYP 328
             G+I M R+   A  CGIA  AS+P
Sbjct: 304 NKGYILMARNKNNA--CGIANLASFP 327


>gi|125526835|gb|EAY74949.1| hypothetical protein OsI_02845 [Oryza sativa Indica Group]
          Length = 360

 Score =  250 bits (639), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 147/324 (45%), Positives = 187/324 (57%), Gaps = 19/324 (5%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREG-NQTYKLSLNEFADLT 79
           S++A+HE WMA+  R Y + AEKA R ++F  N   ++  NR G ++TY L LN+F+DLT
Sbjct: 38  SMAARHERWMARFGRAYADAAEKARRMEVFAANAERVDAANRAGGDRTYTLGLNQFSDLT 97

Query: 80  DEEFIASHTGYK-MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
           D+EF  +H GY   P            N           +P S+DWRARGAVT VKNQ S
Sbjct: 98  DDEFARTHLGYSWAPPPPSHRHGHRAENGTAAAAADDTDVPDSVDWRARGAVTEVKNQRS 157

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-GSRGCYGGWMDDAFSYIIRSQGL 197
           CG CW F+AVAA EG+ ++ TG L+SLSEQQVLDC+ G+  C GG +  A  YI  S GL
Sbjct: 158 CGSCWAFAAVAATEGLVQLATGNLVSLSEQQVLDCTGGANTCSGGDVSAALRYIAASGGL 217

Query: 198 TDERVYPYQRREGYCNW-------QRGAMKAAR-IRSYQDVPTSELALRYAVSRQPVSVA 249
             E  Y Y  ++G C            A+  AR  R Y D    E AL+   + QPV V 
Sbjct: 218 QTEAAYAYGGQQGACRAGGFAAPNSAAAVGGARWARLYGD----EGALQALAAGQPVVVV 273

Query: 250 IDASSPGFRYYSGGVFAG--PCGNNLNHAVTIV--GYGSSNEGPYWLIKNSWGQNWGEGG 305
           ++AS P FR+Y  GV+AG   CG  LNHAVT+V  G  +   G YWL+KN WG  WGEGG
Sbjct: 274 VEASEPDFRHYRSGVYAGSAACGRRLNHAVTVVGYGAAADGGGEYWLVKNQWGTWWGEGG 333

Query: 306 FIRMRRDVGGAGLCGIARKASYPI 329
           ++R+ R     G CGIA  A YP 
Sbjct: 334 YMRVARGGAAGGNCGIATYAFYPT 357


>gi|125606204|gb|EAZ45240.1| hypothetical protein OsJ_29883 [Oryza sativa Japonica Group]
          Length = 350

 Score =  250 bits (639), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 140/328 (42%), Positives = 192/328 (58%), Gaps = 21/328 (6%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +  + E WM +  R Y +  EK  RF+++++N   +E FN   N  YKL+ N+FADLT
Sbjct: 25  DLMLDRFEQWMIRHGRAYTDAGEKQRRFEVYRRNVELVETFNSMSN-GYKLADNKFADLT 83

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYP--DSRRGLPRSIDWRARGAVTPV-KNQ 136
           +EEF A   G++ P   I   S + + +    P   S   LP+S+DWR +GAV    K  
Sbjct: 84  NEEFRAKMLGFR-PHVTIPQISNTCSAD-IAMPGESSDDILPKSVDWRNKGAVINRWKIC 141

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQ 195
              G CW FSAVAA+EGI +I+ G L+SLSEQ+++DC   + GC GG+M  AF +++ + 
Sbjct: 142 VDAGSCWAFSAVAAIEGINQIKNGELVSLSEQELVDCDDEAVGCGGGYMSWAFEFVVGNH 201

Query: 196 GLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASS 254
           GLT E  YPY    G C   +    A  I  Y++V P+SE  L  A + QPVSVA+D  S
Sbjct: 202 GLTTEASYPYHAANGACQAAKLNQSAVAIAGYRNVTPSSEPDLARAAAAQPVSVAVDGGS 261

Query: 255 PGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-----------YWLIKNSWGQNWGE 303
             F+ Y  GV+ GPC  ++NH VT+VGYG S               YW++KNSWG  WG+
Sbjct: 262 FMFQLYGSGVYTGPCTADVNHGVTVVGYGESEPKTDGGGAAKGGEKYWIVKNSWGAEWGD 321

Query: 304 GGFIRMRRDVGG--AGLCGIARKASYPI 329
            G+I M+RDV G  +GLCGIA   SYP+
Sbjct: 322 AGYILMQRDVAGLASGLCGIALLPSYPV 349


>gi|386648112|gb|AFJ15103.1| mexicain-like cystein protease, partial [Jacaratia mexicana]
          Length = 348

 Score =  250 bits (638), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 133/308 (43%), Positives = 186/308 (60%), Gaps = 20/308 (6%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           E WM +  R Y N  EK  RF+IFK N  +I++ N++ N +Y L LNEF DLT +EF   
Sbjct: 49  ESWMLKHDRVYNNIEEKIHRFEIFKDNLMYIDETNKK-NNSYWLGLNEFVDLTHDEFKEK 107

Query: 87  HTG---YKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCW 143
           + G       T   SN  +    +   YP+S       IDWR +GAVTPVK    CG CW
Sbjct: 108 YVGSIGEDFVTIEQSNDEEFPYKHVVDYPES-------IDWRDKGAVTPVK-PNPCGSCW 159

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQGLTDERV 202
            FS VA VEGI KI TG+LISLSEQ++LDC   S GC GG+   +  Y++   G+  E+ 
Sbjct: 160 AFSTVATVEGINKIVTGKLISLSEQELLDCDRRSHGCKGGYQTTSLQYVV-DNGVHTEKE 218

Query: 203 YPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYS 261
           YPY++++G C  +       +I  Y+ VP + E++L  A++ QPVSV +++    F+ Y 
Sbjct: 219 YPYEKKQGKCRAKEKKGTKVQITGYKRVPANDEISLIQAIANQPVSVLLESKGRAFQLYK 278

Query: 262 GGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCG 320
           GG+F GPCG  L+HAVT +GYG +    Y LIKNSWG NWGE G+++++R  G + G CG
Sbjct: 279 GGIFNGPCGTKLDHAVTAIGYGKT----YILIKNSWGPNWGEKGYLKIKRASGKSEGTCG 334

Query: 321 IARKASYP 328
           + + + +P
Sbjct: 335 VYKSSYFP 342


>gi|402856109|ref|XP_003892642.1| PREDICTED: cathepsin K [Papio anubis]
          Length = 348

 Score =  249 bits (637), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 141/326 (43%), Positives = 199/326 (61%), Gaps = 18/326 (5%)

Query: 12  VMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQT 67
           +MS  L+ + I   H ELW     + Y ++ ++  R  I++KN ++I   N E   G  T
Sbjct: 30  MMSFALYPEEILDTHWELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHT 89

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           Y+L++N   D+T+EE +   TG K+P       S S +N+    PD     P S+D+R +
Sbjct: 90  YELAMNHLGDMTNEEVVQKMTGLKVPA------SHSRSNDTLYIPDWEGRAPDSVDYRKK 143

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDD 186
           G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + GC GG+M +
Sbjct: 144 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 203

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ- 244
           AF Y+ +++G+  E  YPY  +E  C +     KAA+ R Y+++P  +E AL+ AV+R  
Sbjct: 204 AFQYVQKNRGIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVG 262

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
           PVSVAIDAS   F++YS GV+     N  NLNHAV  VGYG      +W+IKNSWG+NWG
Sbjct: 263 PVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 322

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYP 328
             G+I M R+   A  CGIA  AS+P
Sbjct: 323 NKGYILMARNKNNA--CGIANLASFP 346


>gi|114559412|ref|XP_001171151.1| PREDICTED: cathepsin K isoform 4 [Pan troglodytes]
 gi|410221358|gb|JAA07898.1| cathepsin K [Pan troglodytes]
 gi|410248298|gb|JAA12116.1| cathepsin K [Pan troglodytes]
 gi|410301088|gb|JAA29144.1| cathepsin K [Pan troglodytes]
 gi|410351445|gb|JAA42326.1| cathepsin K [Pan troglodytes]
          Length = 329

 Score =  249 bits (637), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 143/326 (43%), Positives = 199/326 (61%), Gaps = 18/326 (5%)

Query: 12  VMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQT 67
           V+S  L+ + I   H ELW     + Y N+ ++  R  I++KN ++I   N E   G  T
Sbjct: 11  VVSFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHT 70

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           Y+L++N   D+T EE +   TG K+P       S S +N+    PD     P S+D+R +
Sbjct: 71  YELAMNHLGDMTSEEVVQKMTGLKVPL------SHSRSNDTLYIPDWEGRAPDSVDYRKK 124

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDD 186
           G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + GC GG+M +
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 184

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ- 244
           AF Y+ +++G+  E  YPY  +E  C +     KAA+ R Y+++P  +E AL+ AV+R  
Sbjct: 185 AFEYVQKNRGIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVG 243

Query: 245 PVSVAIDASSPGFRYYSGGV-FAGPCG-NNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
           PVSVAIDAS   F++YS GV F   C  +NLNHAV  VGYG      +W+IKNSWG+NWG
Sbjct: 244 PVSVAIDASLTSFQFYSRGVYFDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 303

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYP 328
             G+I M R+   A  CGIA  AS+P
Sbjct: 304 NKGYILMARNKNNA--CGIANLASFP 327


>gi|449450419|ref|XP_004142960.1| PREDICTED: vignain-like [Cucumis sativus]
          Length = 345

 Score =  249 bits (637), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 144/329 (43%), Positives = 201/329 (61%), Gaps = 11/329 (3%)

Query: 9   ASLVMSRTLHEDSISAKHELWM-----AQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE 63
           + L  S    E  ++ +  LW       +     +N  EK  RF +FK+N   +   N+ 
Sbjct: 18  SGLAESFEFDEKELATEESLWQLYERWGKHHTISRNLKEKHKRFSVFKENVNHVFTVNQM 77

Query: 64  GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSID 123
            ++ YKL LN+FAD+++ EF+  +    +      ++ +  A  +    D+   LP S+D
Sbjct: 78  -DKPYKLKLNKFADMSNYEFVNFYARSNISHYRKLHERRRGAGGFMYEQDT--DLPSSVD 134

Query: 124 WRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-GSRGCYGG 182
           WR RGAV  VK QG CG CW FS+VAAVEGI KI+T +L+SLSEQ++LDC+  ++GC GG
Sbjct: 135 WRERGAVNAVKEQGRCGSCWAFSSVAAVEGINKIKTNQLLSLSEQELLDCNYRNKGCNGG 194

Query: 183 WMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVS 242
           +M+ AF +I R+ G+  E  YPY    G C   R +    +I  Y+ VP +E AL  AV+
Sbjct: 195 FMEIAFDFIKRNGGIATENSYPYHGSRGLCRSSRISSPIVKIDGYESVPENEDALMQAVA 254

Query: 243 RQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNW 301
            QPVSVAIDA+   F++YS GVF G CG  LNH V  +GYG++ +G  YWL++NSWG  W
Sbjct: 255 NQPVSVAIDAAGRDFQFYSQGVFDGYCGTELNHGVVAIGYGTTEDGTDYWLVRNSWGVGW 314

Query: 302 GEGGFIRMRRDVGGA-GLCGIARKASYPI 329
           GE G++RM+R V  A GLCGIA +ASYPI
Sbjct: 315 GEDGYVRMKRGVEQAEGLCGIAMEASYPI 343


>gi|296090463|emb|CBI40282.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  249 bits (637), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 134/311 (43%), Positives = 180/311 (57%), Gaps = 42/311 (13%)

Query: 24  AKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEF 83
           A +E W+ +  ++Y    E+  RF+IFK N RFIE+ N   N+TYK+             
Sbjct: 2   AVYEAWLVKHGKSYNALGERERRFEIFKDNLRFIEEHNAV-NRTYKV------------- 47

Query: 84  IASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCW 143
                G +   R                  +   LP S+DWR +GAV PVK+QG+CG CW
Sbjct: 48  -----GDRYSFR------------------AGEDLPESVDWREKGAVVPVKDQGNCGSCW 84

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDER 201
            FS +AAVEGI +I TG LISLSEQ+++DC  S  +GC GG MD AF +II + G+  E 
Sbjct: 85  AFSTIAAVEGINQIATGDLISLSEQELVDCDKSYNQGCNGGLMDYAFEFIINNGGIDSEE 144

Query: 202 VYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYY 260
            YPY+  +  C+  R   +   I  Y+DVP   E +L+ AV+ QPVSVAI+A    F+ Y
Sbjct: 145 DYPYRAADTTCDPNRKNARVVSIDGYEDVPQNDERSLKKAVANQPVSVAIEAGGRAFQLY 204

Query: 261 SGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG--AGL 318
             GVF G CG  L+H V  VGYG+ N   YW+++NSWG NWGE G+I++ R++ G   G 
Sbjct: 205 QSGVFTGQCGTQLDHGVVAVGYGTENSVDYWIVRNSWGPNWGESGYIKLERNLAGTETGK 264

Query: 319 CGIARKASYPI 329
           CGIA + SYPI
Sbjct: 265 CGIAIEPSYPI 275


>gi|49456399|emb|CAG46520.1| CTSK [Homo sapiens]
          Length = 329

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 141/326 (43%), Positives = 198/326 (60%), Gaps = 18/326 (5%)

Query: 12  VMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQT 67
           V+S  L+ + I   H ELW     + Y N+ ++  R  I++KN ++I   N E   G  T
Sbjct: 11  VVSLALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHT 70

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           Y+L++N   D+T EE +   TG K+P       S S +N+    P+     P S+D+R +
Sbjct: 71  YELAMNHLGDMTSEEVVQKMTGLKVPL------SHSRSNDTLYIPEWEGRAPDSVDYRKK 124

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDD 186
           G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + GC GG+M +
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 184

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ- 244
           AF Y+ +++G+  E  YPY  +E  C +     KAA+ R Y+++P  +E AL+ AV+R  
Sbjct: 185 AFQYVQKNRGIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVG 243

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
           PVSVAIDAS   F++YS GV+     N  NLNHAV  VGYG      +W+IKNSWG+NWG
Sbjct: 244 PVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 303

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYP 328
             G+I M R+   A  CGIA  AS+P
Sbjct: 304 NKGYILMARNKNNA--CGIANLASFP 327


>gi|194352760|emb|CAQ00108.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
 gi|326510977|dbj|BAJ91836.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326523875|dbj|BAJ96948.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326528631|dbj|BAJ97337.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 368

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 132/336 (39%), Positives = 192/336 (57%), Gaps = 22/336 (6%)

Query: 16  TLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQ--TYKLSLN 73
           T   D ++ +   W A+ +RTY    E+  R +++ +N R+IE  N +     TY+L   
Sbjct: 32  TEDADPMAQRFRRWKAEHSRTYATPEEERHRLRVYARNMRYIEATNGDAGAGLTYELGET 91

Query: 74  EFADLTDEEFIASHTGYKMP-------------TRNISNQSQSYANNWFG-YPDSRRGLP 119
            + DLT +EF A +T    P             T      + +    W   Y +   G P
Sbjct: 92  AYTDLTSDEFTAMYTSRAPPLSDDDDDLPMTMITTRAGPVAAAGGGGWLQVYVNESAGAP 151

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRG 178
            S+DWR RGAVT VKNQG CG CW FS VA +EGI +I+TG+L SLSEQ+++DC     G
Sbjct: 152 ASVDWRERGAVTAVKNQGQCGSCWAFSTVAVIEGIHQIKTGKLASLSEQELVDCDKLDHG 211

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELAL 237
           C GG    A  +I  + G+T +  YPY  ++  C+ ++ +  AA I  +Q V T SEL+L
Sbjct: 212 CNGGVSYRALQWITSNGGITSQDDYPYTAKDDTCDTKKLSHHAASISGFQRVATRSELSL 271

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG--PYWLIKN 295
             AV+ QPV+V+I+A    F++Y  GV+ GPCG  LNH VT+VGYG        YW++KN
Sbjct: 272 TNAVAMQPVAVSIEAGGANFQHYRNGVYNGPCGTRLNHGVTVVGYGEDEVTGESYWIVKN 331

Query: 296 SWGQNWGEGGFIRMRRDV--GGAGLCGIARKASYPI 329
           SWG+ WG+ G++RM++ +     G+CGIA + S+P+
Sbjct: 332 SWGEKWGDNGYLRMKKGIIDKPEGICGIAIRPSFPL 367


>gi|162459488|ref|NP_001105571.1| maize insect resistance1 precursor [Zea mays]
 gi|5731354|gb|AAB70820.2| cysteine protease Mir1 [Zea mays]
          Length = 398

 Score =  249 bits (636), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 135/299 (45%), Positives = 186/299 (62%), Gaps = 13/299 (4%)

Query: 38  KNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT 94
           + + ++ +R ++F+ N R+I+  N E   G  T++L L  FADLT EE+     G++   
Sbjct: 80  QEEEDRRLRLEVFRDNLRYIDAHNAEADAGLHTFRLGLTPFADLTLEEYRGRVLGFRARG 139

Query: 95  RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGI 154
           R    +  S      GY      LP +IDWR  GAVT VK+Q  CG CW FSAVAA+EG+
Sbjct: 140 RRSGARYGS------GYSVRGGDLPDAIDWRQLGAVTEVKDQQQCGGCWAFSAVAAIEGV 193

Query: 155 TKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCN 213
             I TG L+SLSEQ+++DC     GC GG M++AF ++I + G+  E  YP+   +G C+
Sbjct: 194 NAIATGNLVSLSEQEIIDCDAQDSGCDGGQMENAFRFVIGNGGIDTEADYPFIGTDGTCD 253

Query: 214 WQRGA-MKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGN 271
             +    K A I    +V ++ E AL+ AV+ QPVSVAIDAS   F++YS G+F GPCG 
Sbjct: 254 ASKEKNEKVATIDGLVEVASNNETALQEAVAIQPVSVAIDASGRAFQHYSSGIFNGPCGT 313

Query: 272 NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPI 329
           +L+H VT VGYGS +   YW++KNSW  +WGE G+IRMRR+V    G CGIA  ASYP+
Sbjct: 314 SLDHGVTAVGYGSESGKDYWIVKNSWSASWGEAGYIRMRRNVPRPTGKCGIAMDASYPV 372


>gi|7523482|dbj|BAA94210.1| putative cysteine protease [Oryza sativa Japonica Group]
 gi|10800060|dbj|BAB16480.1| putative cysteine protease [Oryza sativa Japonica Group]
          Length = 349

 Score =  249 bits (636), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 142/323 (43%), Positives = 186/323 (57%), Gaps = 38/323 (11%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           E WMA+  + Y    EK  RF +F+ N RFI  +         L +N+FADLT++EF+++
Sbjct: 42  EEWMAKFGKKYPCHGEKEYRFGVFRDNVRFIRSYRPPAGYNSALRVNQFADLTNDEFVST 101

Query: 87  HTGYKMPTRNISNQSQSYANNWFGYPDSRRG-----LPRSIDWRARGAVTPVKNQGSCGC 141
           HTG K P                   D+ RG     LP  IDWR +GAVT VK+QG+CG 
Sbjct: 102 HTGAKPPCPK----------------DAPRGVDPIWLPCCIDWRYKGAVTDVKDQGACGS 145

Query: 142 CWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYIIRSQGLTDE 200
           CW F+AVAA+EG+T+IRTG+L  LSEQ+++DC +GS GC GG  D AF  +    G+T E
Sbjct: 146 CWAFAAVAAIEGLTQIRTGKLTPLSEQELVDCDTGSSGCAGGHTDRAFELVAAKGGITAE 205

Query: 201 RVYPYQRREGYCNWQRGAM-KAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFR 258
             Y Y+   G C         AARI  ++ VP   E  L  AV+RQPV+  IDAS P F+
Sbjct: 206 SGYRYEGYRGKCRADDALFNHAARIGGHRAVPPGDERQLATAVARQPVTAYIDASGPAFQ 265

Query: 259 YYSGGVFAGPCGN---------NLNHAVTIVGY---GSSNEGPYWLIKNSWGQNWGEGGF 306
           +Y  GVF GPCG+           NHAVT+VGY   G+S +  YW+ KNSWG+ WGE G+
Sbjct: 266 FYGSGVFPGPCGSGSGAAAAAPTTNHAVTLVGYCQDGASGKK-YWVAKNSWGKTWGEKGY 324

Query: 307 IRMRRDVGGA-GLCGIARKASYP 328
           I + +DV    G CG+A    YP
Sbjct: 325 ILLEKDVASPHGTCGVAVSPFYP 347


>gi|60654335|gb|AAX29858.1| cathepsin K [synthetic construct]
 gi|60654337|gb|AAX29859.1| cathepsin K [synthetic construct]
          Length = 330

 Score =  249 bits (635), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 141/326 (43%), Positives = 198/326 (60%), Gaps = 18/326 (5%)

Query: 12  VMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQT 67
           V+S  L+ + I   H ELW     + Y N+ ++  R  I++KN ++I   N E   G  T
Sbjct: 11  VVSFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHT 70

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           Y+L++N   D+T EE +   TG K+P       S S +N+    P+     P S+D+R +
Sbjct: 71  YELAMNHLGDMTSEEVVQKMTGLKVPL------SHSRSNDTLYIPEWEGRAPDSVDYRKK 124

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDD 186
           G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + GC GG+M +
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 184

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ- 244
           AF Y+ +++G+  E  YPY  +E  C +     KAA+ R Y+++P  +E AL+ AV+R  
Sbjct: 185 AFQYVQKNRGIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVG 243

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
           PVSVAIDAS   F++YS GV+     N  NLNHAV  VGYG      +W+IKNSWG+NWG
Sbjct: 244 PVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 303

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYP 328
             G+I M R+   A  CGIA  AS+P
Sbjct: 304 NKGYILMARNKNNA--CGIANLASFP 327


>gi|218187750|gb|EEC70177.1| hypothetical protein OsI_00904 [Oryza sativa Indica Group]
 gi|222617983|gb|EEE54115.1| hypothetical protein OsJ_00884 [Oryza sativa Japonica Group]
          Length = 327

 Score =  249 bits (635), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 142/323 (43%), Positives = 186/323 (57%), Gaps = 38/323 (11%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           E WMA+  + Y    EK  RF +F+ N RFI  +         L +N+FADLT++EF+++
Sbjct: 20  EEWMAKFGKKYPCHGEKEYRFGVFRDNVRFIRSYRPPAGYNSALRVNQFADLTNDEFVST 79

Query: 87  HTGYKMPTRNISNQSQSYANNWFGYPDSRRG-----LPRSIDWRARGAVTPVKNQGSCGC 141
           HTG K P                   D+ RG     LP  IDWR +GAVT VK+QG+CG 
Sbjct: 80  HTGAKPPCPK----------------DAPRGVDPIWLPCCIDWRYKGAVTDVKDQGACGS 123

Query: 142 CWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYIIRSQGLTDE 200
           CW F+AVAA+EG+T+IRTG+L  LSEQ+++DC +GS GC GG  D AF  +    G+T E
Sbjct: 124 CWAFAAVAAIEGLTQIRTGKLTPLSEQELVDCDTGSSGCAGGHTDRAFELVAAKGGITAE 183

Query: 201 RVYPYQRREGYCNWQRGAM-KAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFR 258
             Y Y+   G C         AARI  ++ VP   E  L  AV+RQPV+  IDAS P F+
Sbjct: 184 SGYRYEGYRGKCRADDALFNHAARIGGHRAVPPGDERQLATAVARQPVTAYIDASGPAFQ 243

Query: 259 YYSGGVFAGPCGN---------NLNHAVTIVGY---GSSNEGPYWLIKNSWGQNWGEGGF 306
           +Y  GVF GPCG+           NHAVT+VGY   G+S +  YW+ KNSWG+ WGE G+
Sbjct: 244 FYGSGVFPGPCGSGSGAAAAAPTTNHAVTLVGYCQDGASGK-KYWVAKNSWGKTWGEKGY 302

Query: 307 IRMRRDVGGA-GLCGIARKASYP 328
           I + +DV    G CG+A    YP
Sbjct: 303 ILLEKDVASPHGTCGVAVSPFYP 325


>gi|4469153|emb|CAB38314.1| chymopapain isoform II [Carica papaya]
          Length = 352

 Score =  249 bits (635), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 128/304 (42%), Positives = 186/304 (61%), Gaps = 9/304 (2%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           WM +  + Y++  EK  RF+IF+ N  +I++ N++ N +Y L LN FADL+++EF   + 
Sbjct: 51  WMLKHNKIYESIDEKIYRFEIFRDNLMYIDETNKK-NNSYWLGLNGFADLSNDEFKKKYV 109

Query: 89  GYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAV 148
           G+           + + N  F Y       P+SIDWRA+GAVTPVKNQG+CG CW FS +
Sbjct: 110 GF---VAEDFTGLEHFDNEDFTYKHVTN-YPQSIDWRAKGAVTPVKNQGACGSCWAFSTI 165

Query: 149 AAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQR 207
           A VEGI KI TG L+ LSEQ+++DC   S GC GG+   +  Y + + G+   +VYPYQ 
Sbjct: 166 ATVEGINKIVTGNLLELSEQELVDCDKHSYGCKGGYQTTSLQY-VANNGVHTSKVYPYQA 224

Query: 208 REGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFA 266
           ++  C          +I  Y+ VP++ E +   A++ QP+S  ++A    F+ Y  GVF 
Sbjct: 225 KQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSFLVEAGGKPFQLYKSGVFD 284

Query: 267 GPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKA 325
           GPCG  L+HAVT VGYG+S+   Y +IKNSWG NWGE G++R++R  G + G CG+ + +
Sbjct: 285 GPCGTKLDHAVTAVGYGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSS 344

Query: 326 SYPI 329
            YP 
Sbjct: 345 YYPF 348


>gi|113120269|gb|ABI30274.1| VS-B, partial [Vasconcellea stipulata]
          Length = 341

 Score =  248 bits (634), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 134/302 (44%), Positives = 179/302 (59%), Gaps = 17/302 (5%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           E WM +  + YK   EK  RF+ FK N  +I++ N++ N +Y L LNEFADLT +EF   
Sbjct: 49  ESWMLKHDKVYKTIDEKIYRFETFKDNLMYIDETNKK-NNSYWLGLNEFADLTHDEFKEK 107

Query: 87  HTGYKMPTRNISNQSQSYANNWFGYPDSRR-GLPRSIDWRARGAVTPVKNQGSCGCCWIF 145
           + G       I  QS         +P+      P SIDWR +GAVTPVKNQ  CG CW F
Sbjct: 108 YVGSIPEDSMIIEQSDDVE-----FPNKHVVDYPESIDWRQKGAVTPVKNQNPCGSCWAF 162

Query: 146 SAVAAVEGITKIRTGRLISLSEQQVLDCS-GSRGCYGGWMDDAFSYIIRSQGLTDERVYP 204
           S VA VEGI KI TG LISLSEQ++LDC   S GC GG+   +  Y++   G+  E+ YP
Sbjct: 163 STVATVEGINKIVTGNLISLSEQELLDCDRRSHGCKGGYQTTSLKYVV-DNGVHTEKEYP 221

Query: 205 YQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYSGG 263
           Y++++G C  +        I  Y+ VP++ E++L   +S QPVSV +++    F++Y GG
Sbjct: 222 YEKKQGNCRAKNKKGLKVYINGYKRVPSNDEISLIKTISIQPVSVLVESKGRPFQFYKGG 281

Query: 264 VFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG---GAGLCG 320
           VF GPCG  L+HAVT VGYG      Y LIKNSWG  WG+ G+I+++R  G    A L G
Sbjct: 282 VFGGPCGTKLDHAVTAVGYGKD----YILIKNSWGPKWGDKGYIKIKRASGQSEHAELTG 337

Query: 321 IA 322
           + 
Sbjct: 338 VT 339


>gi|4503151|ref|NP_000387.1| cathepsin K preproprotein [Homo sapiens]
 gi|1168793|sp|P43235.1|CATK_HUMAN RecName: Full=Cathepsin K; AltName: Full=Cathepsin O; AltName:
           Full=Cathepsin O2; AltName: Full=Cathepsin X; Flags:
           Precursor
 gi|562757|emb|CAA57649.1| Cathepsin O [Homo sapiens]
 gi|606923|gb|AAA65233.1| cathepsin O [Homo sapiens]
 gi|1195556|gb|AAB35521.1| cathepsin O2 [Homo sapiens]
 gi|16359188|gb|AAH16058.1| Cathepsin K [Homo sapiens]
 gi|49456311|emb|CAG46476.1| CTSK [Homo sapiens]
 gi|60823594|gb|AAX36649.1| cathepsin K [synthetic construct]
 gi|119573901|gb|EAW53516.1| cathepsin K (pycnodysostosis), isoform CRA_b [Homo sapiens]
 gi|307685681|dbj|BAJ20771.1| cathepsin K [synthetic construct]
 gi|312150424|gb|ADQ31724.1| cathepsin K [synthetic construct]
          Length = 329

 Score =  248 bits (634), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 141/326 (43%), Positives = 198/326 (60%), Gaps = 18/326 (5%)

Query: 12  VMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQT 67
           V+S  L+ + I   H ELW     + Y N+ ++  R  I++KN ++I   N E   G  T
Sbjct: 11  VVSFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHT 70

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           Y+L++N   D+T EE +   TG K+P       S S +N+    P+     P S+D+R +
Sbjct: 71  YELAMNHLGDMTSEEVVQKMTGLKVPL------SHSRSNDTLYIPEWEGRAPDSVDYRKK 124

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDD 186
           G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + GC GG+M +
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 184

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ- 244
           AF Y+ +++G+  E  YPY  +E  C +     KAA+ R Y+++P  +E AL+ AV+R  
Sbjct: 185 AFQYVQKNRGIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVG 243

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
           PVSVAIDAS   F++YS GV+     N  NLNHAV  VGYG      +W+IKNSWG+NWG
Sbjct: 244 PVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 303

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYP 328
             G+I M R+   A  CGIA  AS+P
Sbjct: 304 NKGYILMARNKNNA--CGIANLASFP 327


>gi|356517368|ref|XP_003527359.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
          Length = 332

 Score =  248 bits (634), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 145/339 (42%), Positives = 194/339 (57%), Gaps = 29/339 (8%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           ML+ M   A  V  RTL + S+  +HE  M +  + YK+  ++      FK+N  +IE  
Sbjct: 14  MLLCMAFLAFQVTCRTLQDASMXERHEQRMTRYGKVYKDPPKRX-----FKENVNYIEAC 68

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N   N+ YK  +N+FA     +     +  ++ T    N + +               P 
Sbjct: 69  NNAANKPYKRGINQFAPRNRFKGHMCSSIIRITTFKFENVTAT---------------PS 113

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SR 177
           ++D R +GAVTP+K+QG CGCCW FSAVAA EGI  +  G+LISLSEQ+++DC       
Sbjct: 114 TVDCRQKGAVTPIKDQGQCGCCWAFSAVAATEGIHALSAGKLISLSEQELVDCDTKGVDX 173

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYP-YQRREGYCNWQRGAMKAARIRS-YQDVPTS-- 233
           GC GG MDDAF +II++ GL      P Y   +G CN    A  AA I + Y+DVP +  
Sbjct: 174 GCEGGLMDDAFKFIIQNHGLKHXSQLPLYMGVDGKCNANEAAKNAATIITGYEDVPANNE 233

Query: 234 ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWL 292
           +  L+ AV+  PVS AIDAS   F++Y  GVF G CG  L+H VT VGYG S++G  YWL
Sbjct: 234 KAHLQKAVANNPVSEAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGVSDDGTEYWL 293

Query: 293 IKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           +KNSWG  WGE G+IRM+R V     LCGIA +ASYP A
Sbjct: 294 VKNSWGTEWGEEGYIRMQRGVDSEEALCGIAVQASYPSA 332


>gi|8886940|gb|AAF80626.1|AC069251_19 F2D10.37 [Arabidopsis thaliana]
          Length = 315

 Score =  248 bits (634), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 130/276 (47%), Positives = 175/276 (63%), Gaps = 8/276 (2%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLT 79
           D +    E W++   + Y+   EK +RF++FK N + I++ N++G ++Y L LNEFADL+
Sbjct: 45  DKLIELFENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKG-KSYWLGLNEFADLS 103

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
            EEF   + G K       ++ +SYA   F Y D    +P+S+DWR +GAV  VKNQGSC
Sbjct: 104 HEEFKKMYLGLKTDIVR-RDEERSYAE--FAYRDVE-AVPKSVDWRKKGAVAEVKNQGSC 159

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGL 197
           G CW FS VAAVEGI KI TG L +LSEQ+++DC  +   GC GG MD AF YI+++ GL
Sbjct: 160 GSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDTTYNNGCNGGLMDYAFEYIVKNGGL 219

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPG 256
             E  YPY   EG C  Q+   +   I  +QDVPT+ E +L  A++ QP+SVAIDAS   
Sbjct: 220 RKEEDYPYSMEEGTCEMQKDESETVTINGHQDVPTNDEKSLLKALAHQPLSVAIDASGRE 279

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWL 292
           F++YSGGVF G CG +L+H V  VGYGSS    Y +
Sbjct: 280 FQFYSGGVFDGRCGVDLDHGVAAVGYGSSKGSDYII 315


>gi|194320502|gb|ACF48469.1| cathepsin L [Triatoma brasiliensis]
          Length = 330

 Score =  248 bits (633), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 132/314 (42%), Positives = 190/314 (60%), Gaps = 21/314 (6%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEFADLTDEEF 83
            ++ A   +TYKNQ E+  R KIF  N + IE  N    +G  +YK+ +N F DL   EF
Sbjct: 28  HVFKAMHGKTYKNQFEEMFRMKIFMDNKKKIEAHNAKYEQGEVSYKMMMNHFGDLMVHEF 87

Query: 84  IASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCW 143
            A   G+KM      N    + +N          LP+++DWR +GAVTPVK+QG CG CW
Sbjct: 88  KALMNGFKMSPDTKRNGELYFPSN--------SNLPKTVDWRQKGAVTPVKDQGQCGSCW 139

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDE 200
            FSA  ++EG   ++TG+L+SLSEQ ++DCS   G+ GC GG MD AF Y+  ++G+  E
Sbjct: 140 SFSATGSLEGQVFLKTGKLVSLSEQNLVDCSTSYGNNGCEGGLMDQAFQYVSDNKGIDTE 199

Query: 201 RVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVAIDASSPGFR 258
             YPY+ RE  C +++  +     + + D+P   E AL+ A++   P+SVAIDA+   F+
Sbjct: 200 ASYPYEARENTCRFKKNKVGGTD-KGHVDIPAGDEKALQNALATVGPISVAIDANHGSFQ 258

Query: 259 YYSGGVFAGP-CGN-NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA 316
           +YS GV+  P C + +L+H V  VGYG+ N   YWL+KNSWG +WGE G+I++ R+   +
Sbjct: 259 FYSKGVYNEPNCSSYDLDHGVLAVGYGTENGQDYWLVKNSWGPSWGENGYIKIARN--HS 316

Query: 317 GLCGIARKASYPIA 330
             CGIA  ASYP+ 
Sbjct: 317 NHCGIASMASYPLV 330


>gi|255078398|ref|XP_002502779.1| cysteine endopeptidase [Micromonas sp. RCC299]
 gi|226518045|gb|ACO64037.1| cysteine endopeptidase [Micromonas sp. RCC299]
          Length = 414

 Score =  248 bits (633), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 142/334 (42%), Positives = 198/334 (59%), Gaps = 22/334 (6%)

Query: 9   ASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GN 65
           A+L    T    S+S     W  +  +TY ++ EK +R KIF  N  F++K N E   G 
Sbjct: 51  AALGEKATKEVGSLSDLFHEWTQKHGKTYDSEEEKELRLKIFADNHEFVQKHNAEYENGE 110

Query: 66  QTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWR 125
            T+ + LN  ADLT +EF     GY    R  ++++   A+ W  Y D     P  IDW 
Sbjct: 111 HTHFVGLNHLADLTKDEF-KKMLGYNAALR--ASRAPVDASTW-EYADVTP--PEEIDWV 164

Query: 126 ARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGW 183
           A GAVTPVKNQ  CG CW FS   AVEG+  I+TG+LISLSE++++ CS  G+ GC GG 
Sbjct: 165 ASGAVTPVKNQKQCGSCWAFSTTGAVEGVNAIKTGKLISLSEEELISCSTNGNMGCNGGL 224

Query: 184 MDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVS 242
           MD+ F +I+ ++G+  E  + Y  +E  C + R   +A  I  ++DVP++ E +L  AVS
Sbjct: 225 MDNGFEWIVNNRGIDTEDGWEYVAKEEKCGFFRRHHRAVAIDGFKDVPSNDEDSLMKAVS 284

Query: 243 RQPVSVAIDASSPGFRYYSGGVF-AGPCGNNLNHAVTIVGYG----SSNEGPYWLIKNSW 297
           +QPVSVAI+A    F+ Y+GGV+ A  CG  L+H V +VGYG    S+    +W IKNSW
Sbjct: 285 QQPVSVAIEADHQSFQLYAGGVYSAKDCGTELDHGVLLVGYGVDPKSTKHKHFWKIKNSW 344

Query: 298 GQNWGEGGFIRMRRDVGGAGL---CGIARKASYP 328
           G  WGE G+IR+ +  GG+G+   CG+A + SYP
Sbjct: 345 GPAWGEDGYIRIAK--GGSGVEGQCGVAMQPSYP 376


>gi|403302736|ref|XP_003942009.1| PREDICTED: cathepsin K isoform 2 [Saimiri boliviensis boliviensis]
          Length = 383

 Score =  248 bits (632), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 142/337 (42%), Positives = 204/337 (60%), Gaps = 25/337 (7%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           +L+ MV++A       L+ + I   H ELW     + Y ++ ++  R  I++KN ++I  
Sbjct: 61  LLLPMVSFA-------LYPEEILDTHWELWKKTHRKQYTSKVDEISRRLIWEKNLKYISI 113

Query: 60  FNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRR 116
            N E   G  T++L++N   D+T EE +   TG K+PT      S S +N+    PD   
Sbjct: 114 HNLEASLGVHTFELAMNHLGDMTSEEVVQKMTGLKVPT------SFSRSNDTLYIPDWEG 167

Query: 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SG 175
             P S+D+R +G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S 
Sbjct: 168 RAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE 227

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SE 234
           + GC GG+M +AF Y+ +++G+  E  YPY  +E  C +     KAA+ R Y+++P  +E
Sbjct: 228 NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNE 286

Query: 235 LALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYW 291
            AL+ AV+R  P+SVAIDAS   F++YS GV+     N  NLNHAV  VGYG      +W
Sbjct: 287 KALKRAVARVGPISVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHW 346

Query: 292 LIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           +IKNSWG+NWG  G+I M R+   A  CGIA  AS+P
Sbjct: 347 IIKNSWGENWGNKGYILMARNKNNA--CGIANLASFP 381


>gi|226499806|ref|NP_001151335.1| cysteine protease 1 [Zea mays]
 gi|195645896|gb|ACG42416.1| cysteine protease 1 precursor [Zea mays]
          Length = 258

 Score =  248 bits (632), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 137/269 (50%), Positives = 178/269 (66%), Gaps = 19/269 (7%)

Query: 70  LSLNEFADLTDEEFIASHTGYK-MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARG 128
           + LNEFAD+T++EF+A +TG + +P          Y N      D  +   +++DWR +G
Sbjct: 1   MELNEFADMTNDEFMAMYTGLRPVPAGAKKMAGFKYGNVTLSDADDDQ---QTVDWRQKG 57

Query: 129 AVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRGCYGGWMDD 186
           AVT +K+Q  CGCCW F+AVAAVEGI +I TG L+SLSEQQVLDC   G+ GC GG++D+
Sbjct: 58  AVTGIKDQRQCGCCWAFAAVAAVEGIHQITTGNLVSLSEQQVLDCDTDGNNGCNGGYIDN 117

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQP 245
           AF YI+ + GL  E  YPY   +  C   +     A I  YQDVP+  E AL  AV+ QP
Sbjct: 118 AFQYIVGNGGLATEDAYPYTAAQAMC---QSVQPVAAISGYQDVPSGDEAALAAAVANQP 174

Query: 246 VSVAIDASSPGFRYYSGGVF-AGPCGN--NLNHAVTIVGYGSSNEG-PYWLIKNSWGQNW 301
           VSVAIDA +  F+ Y GGV  A  C    NLNHAVT VGYG++ +G PYWL+KN WGQNW
Sbjct: 175 VSVAIDAHN--FQLYGGGVMTAASCSTPPNLNHAVTAVGYGTAEDGTPYWLLKNQWGQNW 232

Query: 302 GEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           GEGG++R+ R   GA  CG+A++ASYP+A
Sbjct: 233 GEGGYLRLER---GANACGVAQQASYPVA 258


>gi|52076128|dbj|BAD46641.1| putative cysteine proteinase [Oryza sativa Japonica Group]
 gi|52076135|dbj|BAD46648.1| putative cysteine proteinase [Oryza sativa Japonica Group]
          Length = 374

 Score =  248 bits (632), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 148/332 (44%), Positives = 195/332 (58%), Gaps = 28/332 (8%)

Query: 19  EDSISAKHELW---MAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEF 75
           E+S+ + ++ W      ++ + ++ A+K  RF++FKKN R+I  FNR+   +YKL LN+F
Sbjct: 36  EESMWSLYQRWRHVYGAASSSPRDLADKGSRFEVFKKNARYIHDFNRKKGMSYKLGLNKF 95

Query: 76  ADLTDEEFIASHTGYKM-PTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVK 134
           ADLT EEF A +TG    P   + N + S               P + DWR  GAVT VK
Sbjct: 96  ADLTLEEFTAKYTGANPGPITGLKNGTGSPPLAAVA-----GDAPPAWDWREHGAVTRVK 150

Query: 135 NQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRGCYGGWMDDAFSYIIRS 194
           +QG CG CW FS V AVEGI  I TG L++LSEQQVLDCSG+  C GG+   AF Y + S
Sbjct: 151 DQGPCGSCWAFSVVEAVEGINAIMTGNLLTLSEQQVLDCSGAGDCSGGYTSYAFDYAV-S 209

Query: 195 QGLTDERV------------YP-YQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYA 240
            G+T ++             YP Y+  +  C +        +I SY  V P  E AL+ A
Sbjct: 210 NGITLDQCFSPPTTGENYFYYPAYEAVQEPCRFDPNKAPIVKIDSYSFVDPNDEEALKQA 269

Query: 241 V-SRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWG 298
           V S+ PVSV I+AS   F  Y GGVF+GPCG  LNHAV +VGY  + +G PYW++KNSWG
Sbjct: 270 VYSQGPVSVLIEASYE-FMIYQGGVFSGPCGTELNHAVLVVGYDETEDGTPYWIVKNSWG 328

Query: 299 QNWGEGGFIRMRRDVGGA-GLCGIARKASYPI 329
             WGE G+IRM R++    G+CGIA    YPI
Sbjct: 329 AGWGESGYIRMIRNIPAPEGICGIAMYPIYPI 360


>gi|390476660|ref|XP_003735160.1| PREDICTED: LOW QUALITY PROTEIN: cathepsin K [Callithrix jacchus]
          Length = 329

 Score =  247 bits (631), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 143/337 (42%), Positives = 204/337 (60%), Gaps = 25/337 (7%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           +L+ MV++A       L+ + I   H ELW     + Y ++ ++  R  I++KN ++I  
Sbjct: 7   LLLPMVSFA-------LYPEEILDTHWELWKKTHRKQYNSKVDEISRRLIWEKNLKYISI 59

Query: 60  FNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRR 116
            N E   G  TY+L++N   D+T EE +   TG K+PT      S S +N+    PD   
Sbjct: 60  HNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPT------SYSRSNDTLYIPDWEG 113

Query: 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SG 175
             P S+D+R +G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S 
Sbjct: 114 RAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE 173

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SE 234
           + GC GG+M +AF Y+ +++G+  E  YPY  +E  C +     KAA+ R Y+++P  +E
Sbjct: 174 NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNE 232

Query: 235 LALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYW 291
            AL+ AV+R  P+SVAIDAS   F++YS GV+     N  NLNHAV  VGYG      +W
Sbjct: 233 KALKRAVARVGPISVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGILKGNKHW 292

Query: 292 LIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           +IKNSWG+NWG  G+I M R+   A  CGIA  AS+P
Sbjct: 293 IIKNSWGENWGNKGYILMARNKNNA--CGIANLASFP 327


>gi|238007404|gb|ACR34737.1| unknown [Zea mays]
 gi|413943289|gb|AFW75938.1| cysteine proteinase Mir2 [Zea mays]
          Length = 484

 Score =  247 bits (631), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 132/297 (44%), Positives = 184/297 (61%), Gaps = 10/297 (3%)

Query: 40  QAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRN 96
           + + A R ++F+ N R+I+  N E   G   ++L L  FADLT EE+ A      + +R 
Sbjct: 77  EDDDARRLEVFRYNLRYIDAHNAEADAGLHGFRLGLTRFADLTLEEYRAR---LLLGSRG 133

Query: 97  ISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITK 156
            +  +     +    P +   LP ++DWR RGAV  VK+QG CG CW FSAVAAVEGI K
Sbjct: 134 RNGTAVGVVGSRRYLPLAGEQLPDAVDWRERGAVAEVKDQGQCGACWAFSAVAAVEGINK 193

Query: 157 IRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNW 214
           I TG LISLSEQ+++DC     +GC GG MD+AF ++I++ G+  E  YP+   +G C+ 
Sbjct: 194 IVTGSLISLSEQELIDCDKFQDQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDL 253

Query: 215 QRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNL 273
           +    +   I S++ VP + E AL+ AV+ QPVS +I+AS   F+ YS G+F G CG  L
Sbjct: 254 KLKNTRVVSIDSFERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYL 313

Query: 274 NHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPI 329
           +H VT+VGYGS     YW++KNSWG  WGE G++RM R+V   AG CGIA +  YP+
Sbjct: 314 DHGVTVVGYGSEGGKDYWIVKNSWGTQWGEAGYVRMARNVRVRAGKCGIAMEPLYPV 370


>gi|129614|sp|P00784.1|PAPA1_CARPA RecName: Full=Papain; AltName: Full=Papaya proteinase I; Short=PPI;
           AltName: Allergen=Car p 1; Flags: Precursor
 gi|167391|gb|AAB02650.1| papain precursor [Carica papaya]
 gi|387885|gb|AAA72774.1| papain [synthetic construct]
 gi|225437|prf||1303270A papain
          Length = 345

 Score =  247 bits (631), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 133/306 (43%), Positives = 184/306 (60%), Gaps = 14/306 (4%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           E WM +  + YKN  EK  RF+IFK N ++I++ N++ N +Y L LN FAD++++EF   
Sbjct: 49  ESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKK-NNSYWLGLNVFADMSNDEFKEK 107

Query: 87  HTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFS 146
           +TG        +  S     N     D    +P  +DWR +GAVTPVKNQGSCG CW FS
Sbjct: 108 YTGSIAGNYTTTELSYEEVLN-----DGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFS 162

Query: 147 AVAAVEGITKIRTGRLISLSEQQVLDCS-GSRGCYGGWMDDAFSYIIRSQGLTDERVYPY 205
           AV  +EGI KIRTG L   SEQ++LDC   S GC GG+   A   ++   G+     YPY
Sbjct: 163 AVVTIEGIIKIRTGNLNEYSEQELLDCDRRSYGCNGGYPWSALQ-LVAQYGIHYRNTYPY 221

Query: 206 QRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGFRYYSGGV 264
           +  + YC  +     AA+    + V P +E AL Y+++ QPVSV ++A+   F+ Y GG+
Sbjct: 222 EGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGI 281

Query: 265 FAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIAR 323
           F GPCGN ++HAV  VGYG +    Y LIKNSWG  WGE G+IR++R  G + G+CG+  
Sbjct: 282 FVGPCGNKVDHAVAAVGYGPN----YILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYT 337

Query: 324 KASYPI 329
            + YP+
Sbjct: 338 SSFYPV 343


>gi|320169652|gb|EFW46551.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 325

 Score =  247 bits (631), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 141/309 (45%), Positives = 181/309 (58%), Gaps = 16/309 (5%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           W A   R Y +  E+A+R +I+  N   I + N  G  +Y L +NEF DL   EF A + 
Sbjct: 24  WKALHNRQYASAQEEALRQEIYLSNLELINEHNAAGRHSYTLGMNEFGDLAHHEFAAKYL 83

Query: 89  GYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAV 148
           G +    N  N ++S+A++   Y      LP S+DWR  G VTPVKNQG CG CW FS  
Sbjct: 84  GVRF---NGVNATKSFASS--TYLPRMVSLPDSVDWRTAGIVTPVKNQGQCGSCWSFSTT 138

Query: 149 AAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPY 205
            +VEG    +TG L+SLSEQ ++DCS   G+ GC GG MDDAF YII++ G+  E  YPY
Sbjct: 139 GSVEGQHARKTGTLVSLSEQNLVDCSSQEGNEGCNGGLMDDAFEYIIKNGGIDTEASYPY 198

Query: 206 QRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVAIDASSPGFRYYSGG 263
               G C +   A   A + SYQD+ T SE  L+ AV+   PVSVAIDAS   F++Y  G
Sbjct: 199 TATTGTCKF-NAANIGATVASYQDIITGSESDLQNAVATVGPVSVAIDASHINFQFYFTG 257

Query: 264 VF-AGPCGNN-LNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCG 320
           V+    C    L+H V  VGYG+S EG  YWL+KNSWG  WG+ G+I M R+      CG
Sbjct: 258 VYNEKKCSTTQLDHGVLAVGYGTSTEGKDYWLVKNSWGATWGKAGYIWMSRNADNQ--CG 315

Query: 321 IARKASYPI 329
           IA  ASYP+
Sbjct: 316 IATSASYPL 324


>gi|161408097|dbj|BAF94152.1| cathepsin L-like cysteine protease 2 [Plautia stali]
          Length = 334

 Score =  247 bits (631), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 130/305 (42%), Positives = 183/305 (60%), Gaps = 15/305 (4%)

Query: 35  RTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEFADLTDEEFIASHTGYK 91
           + Y N+ E++ R KIF +N + IEK N   ++G  ++KL LN  AD+   E+   + G+ 
Sbjct: 36  KEYDNELEESYRKKIFLENKKRIEKHNSRYKQGKVSFKLKLNHLADMLIHEYSDVYLGFN 95

Query: 92  MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAV 151
             ++  +N+ QSY       P +   L + +DWR +GAVTPVKNQG CG CW FS   A+
Sbjct: 96  KSSKANNNKLQSYT----FIPPAHVTLNKEVDWRTKGAVTPVKNQGHCGSCWAFSTTGAL 151

Query: 152 EGITKIRTGRLISLSEQQVLDCSGS---RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRR 208
           EG    +TG+L+SLSEQ ++DCSGS    GC GG MD+AF YI  + G+  E+ YPY+  
Sbjct: 152 EGQNFRKTGKLVSLSEQNLVDCSGSYGNNGCEGGLMDNAFQYIKENHGIDTEKSYPYEGE 211

Query: 209 EGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSR-QPVSVAIDASSPGFRYYSGGVFAG 267
           +  C +++ ++ A            E AL  AV+   P+SVAIDAS   F++YS GV+  
Sbjct: 212 DETCRFRKTSIGATDSGFVDITQGDEEALMQAVATIGPISVAIDASHQSFQFYSEGVYYE 271

Query: 268 P--CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKA 325
           P     NL+H V +VGYG  +   YWL+KNSWG  WG+GG+I+M RD      CGIA +A
Sbjct: 272 PECSSENLDHGVLVVGYGVEDNQKYWLVKNSWGTQWGDGGYIKMARDQDNN--CGIATQA 329

Query: 326 SYPIA 330
           SYP+ 
Sbjct: 330 SYPLV 334


>gi|449447027|ref|XP_004141271.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus]
          Length = 458

 Score =  247 bits (630), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 144/328 (43%), Positives = 200/328 (60%), Gaps = 20/328 (6%)

Query: 9   ASLVMSRTLHEDSISAKHELWMAQSARTYKNQ-AEKAMRFKIFKKNFRFIEKFNREGNQT 67
           +S++  RT  +D + A ++ W A+  + + N  AE   RF IFK N +FI++ N + N  
Sbjct: 26  SSIIPQRT--DDEVMALYDQWRAKHGKLHNNLGAEPENRFHIFKDNLKFIDEINAQ-NLP 82

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           Y+L LN FADLT+EE+ + + G K  + +  N++   +N +   P     LP SIDWRA+
Sbjct: 83  YRLGLNVFADLTNEEYRSRYLGGKFASGSRRNRT---SNRYL--PRLGDDLPDSIDWRAK 137

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMD 185
           GAV PVK+QGSCG CW FS VA+VE I +I TG LI+LSEQ+++DC  S   GC GG MD
Sbjct: 138 GAVAPVKDQGSCGSCWAFSTVASVEAINQIVTGDLIALSEQELVDCDRSYNEGCNGGLMD 197

Query: 186 DAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYA---V 241
            AF +II + GL  E  YPY   +  C       K   I  Y+DVP  +E AL+ A    
Sbjct: 198 YAFEFIIENGGLDTEEDYPYYGFDSSCI----QYKKNAIDGYEDVPVNNEKALQKAVSKQ 253

Query: 242 SRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNW 301
               VSVAI+     F+ Y  G+F G CG +L+H V +VGYGS     YW+++NSWG +W
Sbjct: 254 VVSVVSVAIEGGGRSFQLYQSGIFTGRCGTDLDHGVNVVGYGSEGGVDYWIVRNSWGGSW 313

Query: 302 GEGGFIRMRRDVGG-AGLCGIARKASYP 328
           GE G+++M+R++    GLCGIA + SYP
Sbjct: 314 GESGYVKMQRNIASPTGLCGIAMEPSYP 341


>gi|344275468|ref|XP_003409534.1| PREDICTED: cathepsin K-like [Loxodonta africana]
          Length = 329

 Score =  247 bits (630), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 139/326 (42%), Positives = 198/326 (60%), Gaps = 18/326 (5%)

Query: 12  VMSRTLH-EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQT 67
           V+S  L+ E+ +  + ELW     + Y ++ ++  R  I++KN ++I   N E   G  T
Sbjct: 11  VVSFALYPEEILDTQWELWKKTYGKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGAHT 70

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           Y+L++N   D+T EE +   TG K+P  +  N    Y  +W G        P SID+R +
Sbjct: 71  YELAMNHLGDMTSEEVVQKMTGLKVPPSDSRNNDTLYIPDWEGRA------PDSIDYRKK 124

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDD 186
           G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + GC GG+M +
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 184

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ- 244
           AF Y+ +++G+  E  YPY  ++  C +     KAA+ R Y+++P  +E AL+ AV+R  
Sbjct: 185 AFQYVQKNRGIDSEDAYPYVGQDESCMYNPTG-KAAKCRGYREIPVGNEKALKRAVARVG 243

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
           PVSVAIDAS   F++YS GV+     N  NLNHAV  VGYG      +W+IKNSWG+NWG
Sbjct: 244 PVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 303

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYP 328
             G+I M R+   A  CGIA  AS+P
Sbjct: 304 NKGYILMARNKNNA--CGIANLASFP 327


>gi|194701748|gb|ACF84958.1| unknown [Zea mays]
 gi|414589103|tpg|DAA39674.1| TPA: thiol protease SEN102 [Zea mays]
          Length = 374

 Score =  246 bits (629), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 143/339 (42%), Positives = 198/339 (58%), Gaps = 22/339 (6%)

Query: 13  MSRTLHED--SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQ---T 67
           M R++  D  S+  + + W A   ++Y   AE+  RF++  +N  +IE  N E      T
Sbjct: 35  MERSMSTDDSSMIERFQRWKAAYNKSYATVAEERRRFRVCARNMAYIEATNAEAEAAGLT 94

Query: 68  YKLSLNEFADLTDEEFIASHTG---YKMPTRNISNQSQSYANNWFG--------YPDSRR 116
           Y+L    + DLT++EF+A +T     ++P       +++   +  G        Y +   
Sbjct: 95  YELGETAYTDLTNQEFMAMYTAPAPAQLPADESVITTRAGPVDAVGGAPGQLPVYVNLST 154

Query: 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG- 175
             P S+DWRA GAVTPVKNQG CG CW FS VA VEGI +IRTG+L+SLSEQ+++DC   
Sbjct: 155 SAPASVDWRASGAVTPVKNQGRCGSCWAFSTVAVVEGIYQIRTGKLVSLSEQELVDCDTL 214

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SE 234
             GC GG    A  +I  + G+T E  YPY      CN  + +  A  I   + V T SE
Sbjct: 215 DDGCDGGISYRALRWIASNGGITTETDYPYTGTTDACNRAKLSHNAVSIAGLRRVATRSE 274

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP--YWL 292
            +L  AV+ QPV+V+I+A    F++Y  GV+ GPCG NLNH VT+VGYG    G   YW+
Sbjct: 275 ASLANAVAGQPVAVSIEAGGDNFQHYKKGVYNGPCGTNLNHGVTVVGYGQEAAGGDRYWI 334

Query: 293 IKNSWGQNWGEGGFIRMRRDVGGA--GLCGIARKASYPI 329
           +KNSWGQ WG+ G+IRM++DV G   GLCGIA + SYP+
Sbjct: 335 VKNSWGQGWGDDGYIRMKKDVAGKPEGLCGIAIRPSYPL 373


>gi|226505708|ref|NP_001141813.1| uncharacterized protein LOC100273952 precursor [Zea mays]
 gi|194706024|gb|ACF87096.1| unknown [Zea mays]
 gi|413945958|gb|AFW78607.1| hypothetical protein ZEAMMB73_489507 [Zea mays]
          Length = 460

 Score =  246 bits (629), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 135/325 (41%), Positives = 191/325 (58%), Gaps = 21/325 (6%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQ-------------T 67
           +I A+ + W A+  + Y    E+A R  +F  N  F+   N                  +
Sbjct: 31  AIEAQFDAWCAEHGKAYATPEERAARLAVFADNAAFVAAHNARAGANAAGGGGGGAAPPS 90

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           Y L+LN FADLT EEF A+  G   P   + +++   A  ++G       +P ++DWR  
Sbjct: 91  YTLALNAFADLTHEEFRAARLGRIAPGAALRSRA---APVYWGL-GGGAAVPDALDWRKS 146

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMD 185
           GAVT VK+QGSCG CW FSA  A+EGI KI+TG L+SLSEQ+++DC  S   GC GG MD
Sbjct: 147 GAVTKVKDQGSCGACWSFSATGAMEGINKIKTGSLVSLSEQELIDCDRSYNSGCGGGLMD 206

Query: 186 DAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQ 244
            A+ ++I++ G+  E  YPY+  +G CN  +   +   I  Y DVP++ E  L  AV++Q
Sbjct: 207 YAYKFVIKNGGIDTEEDYPYREADGTCNKNKLKKRVVTIDGYTDVPSNKEDLLLQAVAQQ 266

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEG 304
           PVSV I  S+  F+ Y  G+F GPC  +L+HAV IVGYGS     YW++KNSWG++WG  
Sbjct: 267 PVSVGICGSARAFQLYYQGIFDGPCPTSLDHAVLIVGYGSEGGKDYWIVKNSWGESWGMK 326

Query: 305 GFIRMRRDVGGA-GLCGIARKASYP 328
           G++ M R+ G + G+CGI   AS+P
Sbjct: 327 GYMHMHRNTGDSKGVCGINMMASFP 351


>gi|146217394|gb|ABQ10739.1| cathepsin L [Penaeus monodon]
          Length = 341

 Score =  246 bits (629), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 130/314 (41%), Positives = 193/314 (61%), Gaps = 14/314 (4%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNR---EGNQTYKLSLNEFADLTDEEF 83
           E +  + ++ Y ++ E++ R KIF +N   I   N+   +G+ TYKLS+N++ D+   EF
Sbjct: 30  EAFKLEHSKKYDSEVEESFRMKIFTENKHKIANHNKGFAQGHHTYKLSMNKYGDMLHHEF 89

Query: 84  IASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCW 143
           +++  G++         +++Y    F  PD    LP+++DWR +GAVTP+K+QG CG CW
Sbjct: 90  VSTMNGFRGNHTGGYKNNRAYTGATFIEPDDDVQLPKNVDWRTKGAVTPIKDQGQCGSCW 149

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDE 200
            FSA  A+EG T  +TG+L+SLSEQ ++DCS   G+ GC GG MD+AF Y+  + G+  E
Sbjct: 150 AFSATGALEGQTFRKTGQLVSLSEQNLVDCSRKFGNNGCNGGLMDNAFEYVKENGGIDTE 209

Query: 201 RVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSR-QPVSVAIDASSPGFR 258
             YPY   +  C++   A   A  + + DV   SE AL+ AV+   PVSVAIDAS   F+
Sbjct: 210 ESYPYDAEDEKCHYNPRAA-GAEDKGFVDVREGSEHALKKAVATVGPVSVAIDASHESFQ 268

Query: 259 YYSGGVFAGP-CGNN-LNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGG 315
           +YS GV+  P C    L+H V +VGYG  ++G  YWL+KNSWG  WG+ G+++M R+   
Sbjct: 269 FYSHGVYIEPECSPEMLDHGVLVVGYGIDDDGTDYWLVKNSWGTTWGDQGYVKMARNRDN 328

Query: 316 AGLCGIARKASYPI 329
              CGIA  AS+P+
Sbjct: 329 Q--CGIASSASFPL 340


>gi|403302734|ref|XP_003942008.1| PREDICTED: cathepsin K isoform 1 [Saimiri boliviensis boliviensis]
          Length = 329

 Score =  246 bits (629), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 142/337 (42%), Positives = 204/337 (60%), Gaps = 25/337 (7%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           +L+ MV++A       L+ + I   H ELW     + Y ++ ++  R  I++KN ++I  
Sbjct: 7   LLLPMVSFA-------LYPEEILDTHWELWKKTHRKQYTSKVDEISRRLIWEKNLKYISI 59

Query: 60  FNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRR 116
            N E   G  T++L++N   D+T EE +   TG K+PT      S S +N+    PD   
Sbjct: 60  HNLEASLGVHTFELAMNHLGDMTSEEVVQKMTGLKVPT------SFSRSNDTLYIPDWEG 113

Query: 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SG 175
             P S+D+R +G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S 
Sbjct: 114 RAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE 173

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SE 234
           + GC GG+M +AF Y+ +++G+  E  YPY  +E  C +     KAA+ R Y+++P  +E
Sbjct: 174 NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNE 232

Query: 235 LALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYW 291
            AL+ AV+R  P+SVAIDAS   F++YS GV+     N  NLNHAV  VGYG      +W
Sbjct: 233 KALKRAVARVGPISVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHW 292

Query: 292 LIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           +IKNSWG+NWG  G+I M R+   A  CGIA  AS+P
Sbjct: 293 IIKNSWGENWGNKGYILMARNKNNA--CGIANLASFP 327


>gi|237844793|ref|XP_002371694.1| cathepsin L-like thiolproteinase, putative [Toxoplasma gondii ME49]
 gi|50313163|gb|AAT74529.1| toxopain-2 [Toxoplasma gondii]
 gi|89242977|gb|ABD64744.1| cathepsin L [Toxoplasma gondii]
 gi|95007485|emb|CAJ20707.1| toxopain-2 [Toxoplasma gondii RH]
 gi|211969358|gb|EEB04554.1| cathepsin L-like thiolproteinase, putative [Toxoplasma gondii ME49]
 gi|221480879|gb|EEE19300.1| cysteine protease, putative [Toxoplasma gondii GT1]
 gi|221501596|gb|EEE27366.1| cysteine protease, putative [Toxoplasma gondii VEG]
          Length = 422

 Score =  246 bits (629), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 125/307 (40%), Positives = 183/307 (59%), Gaps = 11/307 (3%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           + A  A++Y  + EK  R+ IFK N  +I   N++G  +Y L +N F DL+ +EF   + 
Sbjct: 120 FQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQG-YSYSLKMNHFGDLSRDEFRRKYL 178

Query: 89  GYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAV 148
           G+K  +RN+ +     A        S   LP  +DWR+RG VTPVK+Q  CG CW FS  
Sbjct: 179 GFK-KSRNLKSHHLGVATELLNVLPSE--LPAGVDWRSRGCVTPVKDQRDCGSCWAFSTT 235

Query: 149 AAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPY 205
            A+EG    +TG+L+SLSEQ+++DCS   G++ C GG M+DAF Y++ S G+  E  YPY
Sbjct: 236 GALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVLDSGGICSEDAYPY 295

Query: 206 QRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGV 264
             R+  C  Q    K  +I  ++DVP  SE A++ A+++ PVS+AI+A    F++Y  GV
Sbjct: 296 LARDEECRAQ-SCEKVVKILGFKDVPRRSEAAMKAALAKSPVSIAIEADQMPFQFYHEGV 354

Query: 265 FAGPCGNNLNHAVTIVGYGSSNEGP--YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIA 322
           F   CG +L+H V +VGYG+  E    +W++KNSWG  WG  G++ M    G  G CG+ 
Sbjct: 355 FDASCGTDLDHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKGEEGQCGLL 414

Query: 323 RKASYPI 329
             AS+P+
Sbjct: 415 LDASFPV 421


>gi|260516654|gb|ACX43954.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516656|gb|ACX43955.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516658|gb|ACX43956.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516660|gb|ACX43957.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516662|gb|ACX43958.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516664|gb|ACX43959.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516666|gb|ACX43960.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516668|gb|ACX43961.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516670|gb|ACX43962.1| cysteine protease 2 [Brachiaria hybrid cultivar]
          Length = 338

 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 142/323 (43%), Positives = 188/323 (58%), Gaps = 24/323 (7%)

Query: 12  VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLS 71
           V S  + +D  +A    +M Q ++ Y + AE + RF  FK N   I   N   N +Y + 
Sbjct: 32  VPSEVMLQDMFTA----FMKQYSKAY-SHAEFSSRFNQFKANVETIRLHNTLANASYTMG 86

Query: 72  LNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVT 131
           LNEFADL+ EEF   + GYK   R  +      +NN           P SIDWR   AVT
Sbjct: 87  LNEFADLSFEEFKGKYFGYKHVEREFAR-----SNN---LHQEVEAAPTSIDWRTSNAVT 138

Query: 132 PVKNQGSCGCCWIFSAVAAVEGITKIRTGR-LISLSEQQVLDCS---GSRGCYGGWMDDA 187
           P+K+QG CG CW FSA  ++EG   ++    L SLSEQQ++DCS   G+ GC GG MD A
Sbjct: 139 PIKDQGQCGSCWAFSATGSIEGAWVLQGKHTLTSLSEQQLVDCSTSYGNAGCNGGLMDYA 198

Query: 188 FSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAV-SRQP 245
           F YII ++G+  E  YPY+   G C  Q+   K   I  Y+DV +  E +L  AV +  P
Sbjct: 199 FEYIIANKGICAESAYPYKGVGGLC--QKSCTKVVTISGYKDVASGDEASLLNAVGTVGP 256

Query: 246 VSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGG 305
           VSVAI+A   GF++YS GVF+G CG+NL+H V  VGYG++    YW++KNSWG +WGE G
Sbjct: 257 VSVAIEADQAGFQFYSSGVFSGTCGHNLDHGVLAVGYGTTGSQDYWIVKNSWGTSWGESG 316

Query: 306 FIRMRRDVGGAGLCGIARKASYP 328
           +IRM R+      CGIA + SYP
Sbjct: 317 YIRMIRN---KNQCGIAIQPSYP 336


>gi|125552927|gb|EAY98636.1| hypothetical protein OsI_20560 [Oryza sativa Indica Group]
          Length = 449

 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 132/308 (42%), Positives = 183/308 (59%), Gaps = 9/308 (2%)

Query: 24  AKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEF 83
           A+ E W A+  R+Y    E+A R   F  N  F+   N     +Y L+LN FADLT +EF
Sbjct: 36  AQFEAWCAEHGRSYATPGERAARLAAFADNAAFVAAHNG-APASYALALNAFADLTHDEF 94

Query: 84  IASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCW 143
            A+  G         +    Y     G       +P ++DWR  GAVT VK+QGSCG CW
Sbjct: 95  RAARLGRLAAAGPGRDGGAPY----LGVDGGVGAVPDAVDWRQSGAVTKVKDQGSCGACW 150

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDER 201
            FSA  A+EGI KI+TG LISLSEQ+++DC  S   GC GG MD A+ +++++ G+  E 
Sbjct: 151 SFSATGAMEGINKIKTGSLISLSEQELIDCDRSYNSGCGGGLMDYAYKFVVKNGGIDTEA 210

Query: 202 VYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYY 260
            YPY+  +G CN  +   +   I  Y+DVP + E  L  AV++QPVSV I  S+  F+ Y
Sbjct: 211 DYPYRETDGTCNKNKLKRRVVTIDGYKDVPANNEDMLLQAVAQQPVSVGICGSARAFQLY 270

Query: 261 SGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLC 319
           S G+F GPC  +L+HA+ IVGYGS     YW++KNSWG++WG  G++ M R+ G + G+C
Sbjct: 271 SKGIFDGPCPTSLDHAILIVGYGSEGGKDYWIVKNSWGESWGMKGYMYMHRNTGNSNGVC 330

Query: 320 GIARKASY 327
           GI +  S+
Sbjct: 331 GINQMPSF 338


>gi|332220183|ref|XP_003259237.1| PREDICTED: cathepsin S isoform 1 [Nomascus leucogenys]
          Length = 331

 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/342 (40%), Positives = 201/342 (58%), Gaps = 30/342 (8%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           ++ +++  +S V    LH+D     H  LW     + YK + E+A+R  I++KN +F+  
Sbjct: 4   LVCVLLVCSSAVAQ--LHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVML 61

Query: 60  FNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPD 113
            N E   G  +Y L +N   D+T EE ++  +  ++P+   RNI+ +S           +
Sbjct: 62  HNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRNITYKS-----------N 110

Query: 114 SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
             + LP S+DWR +G VT VK QGSCG CW FSAV A+E   K++TG+L+SLS Q ++DC
Sbjct: 111 PNQILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDC 170

Query: 174 S----GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQD 229
           S    G++GC GG+M  AF YII ++G+  +  YPY+  +  C +     +AA    Y +
Sbjct: 171 STEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYD-SKYRAATCSKYTE 229

Query: 230 VPTS-ELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSN 286
           +P S E  L+ AV+ + PVSV +DAS P F  Y  GV+  P C  N+NH V +VGYG  N
Sbjct: 230 LPYSREDVLKEAVANKGPVSVGVDASHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLN 289

Query: 287 EGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
              YWL+KNSWG+N+GE G+IRM R+ G    CGIA   SYP
Sbjct: 290 GKEYWLVKNSWGRNFGEEGYIRMARNKGNH--CGIASFPSYP 329


>gi|6435586|pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435587|pdb|7PCK|B Chain B, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435588|pdb|7PCK|C Chain C, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435589|pdb|7PCK|D Chain D, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435592|pdb|1BY8|A Chain A, The Crystal Structure Of Human Procathepsin K
          Length = 314

 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/321 (43%), Positives = 195/321 (60%), Gaps = 18/321 (5%)

Query: 17  LHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSL 72
           L+ + I   H ELW     + Y N+ ++  R  I++KN ++I   N E   G  TY+L++
Sbjct: 1   LYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAM 60

Query: 73  NEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTP 132
           N   D+T EE +   TG K+P       S S +N+    P+     P S+D+R +G VTP
Sbjct: 61  NHLGDMTSEEVVQKMTGLKVPL------SHSRSNDTLYIPEWEGRAPDSVDYRKKGYVTP 114

Query: 133 VKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYI 191
           VKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + GC GG+M +AF Y+
Sbjct: 115 VKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYV 174

Query: 192 IRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVA 249
            +++G+  E  YPY  +E  C +     KAA+ R Y+++P  +E AL+ AV+R  PVSVA
Sbjct: 175 QKNRGIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVGPVSVA 233

Query: 250 IDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFI 307
           IDAS   F++YS GV+     N  NLNHAV  VGYG      +W+IKNSWG+NWG  G+I
Sbjct: 234 IDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYI 293

Query: 308 RMRRDVGGAGLCGIARKASYP 328
            M R+   A  CGIA  AS+P
Sbjct: 294 LMARNKNNA--CGIANLASFP 312


>gi|66270077|gb|AAY43368.1| cysteine protease [Phytophthora infestans]
          Length = 510

 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 135/313 (43%), Positives = 184/313 (58%), Gaps = 14/313 (4%)

Query: 25  KHEL--WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQT-YKLSLNEFADLTDE 81
           +HE   WM   + ++ +  E A R + +  N  +I + N E   T  KL  NEF+ ++ E
Sbjct: 26  EHEFSAWMKTHSVSFSDALEFAKRLENYIANDMYIMEHNLENAWTGVKLDHNEFSSMSFE 85

Query: 82  EFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGC 141
           EF    TGY MP   +  +  S  +N +    S   +P S+DW+ +G VTPVKNQG CG 
Sbjct: 86  EFKFKMTGYVMPEGYLEQRLASRVDNLW----SDVQVPDSVDWQDKGGVTPVKNQGMCGS 141

Query: 142 CWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIRSQGLTD 199
           CW FS   AVEG   + +G+L+SLSEQ+++DC  +G  GC GG MD AF++I  + G+  
Sbjct: 142 CWAFSTTGAVEGAAFVSSGKLVSLSEQELVDCDHNGDMGCNGGLMDHAFAWIEDNGGICS 201

Query: 200 ERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGFR 258
           E  Y Y+ +   C   R   K  +I  +QDV P  E AL+ AV++QPVSVAI+A    F+
Sbjct: 202 EDDYEYKAKAQVC---RDCEKVVKISGFQDVNPQDEHALKVAVAQQPVSVAIEADQKAFQ 258

Query: 259 YYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AG 317
           +Y  GVF   CG  L+H V  VGYGS N   +W +KNSWG +WGE G+IR+ R+  G AG
Sbjct: 259 FYKSGVFNLTCGTRLDHGVLAVGYGSENGQKFWKVKNSWGSSWGEKGYIRLAREENGPAG 318

Query: 318 LCGIARKASYPIA 330
            CGIA   SYP A
Sbjct: 319 QCGIASVPSYPFA 331


>gi|301116794|ref|XP_002906125.1| cysteine protease family C01A, putative [Phytophthora infestans
           T30-4]
 gi|262107474|gb|EEY65526.1| cysteine protease family C01A, putative [Phytophthora infestans
           T30-4]
          Length = 535

 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 135/313 (43%), Positives = 184/313 (58%), Gaps = 14/313 (4%)

Query: 25  KHEL--WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQT-YKLSLNEFADLTDE 81
           +HE   WM   + ++ +  E A R + +  N  +I + N E   T  KL  NEF+ ++ E
Sbjct: 26  EHEFSAWMKTHSVSFSDALEFAKRLENYIANDMYIMEHNLENAWTGVKLDHNEFSSMSFE 85

Query: 82  EFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGC 141
           EF    TGY MP   +  +  S  +N +    S   +P S+DW+ +G VTPVKNQG CG 
Sbjct: 86  EFKFKMTGYVMPEGYLEQRLASRVDNLW----SDVQVPDSVDWQDKGGVTPVKNQGMCGS 141

Query: 142 CWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIRSQGLTD 199
           CW FS   AVEG   + +G+L+SLSEQ+++DC  +G  GC GG MD AF++I  + G+  
Sbjct: 142 CWAFSTTGAVEGAAFVSSGKLVSLSEQELVDCDHNGDMGCNGGLMDHAFAWIEDNGGICS 201

Query: 200 ERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGFR 258
           E  Y Y+ +   C   R   K  +I  +QDV P  E AL+ AV++QPVSVAI+A    F+
Sbjct: 202 EDDYEYKAKAQVC---RDCEKVVKISGFQDVNPQDEHALKVAVAQQPVSVAIEADQKAFQ 258

Query: 259 YYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AG 317
           +Y  GVF   CG  L+H V  VGYGS N   +W +KNSWG +WGE G+IR+ R+  G AG
Sbjct: 259 FYKSGVFNLTCGTRLDHGVLAVGYGSENGQKFWKVKNSWGSSWGEKGYIRLAREENGPAG 318

Query: 318 LCGIARKASYPIA 330
            CGIA   SYP A
Sbjct: 319 QCGIASVPSYPFA 331


>gi|326490904|dbj|BAJ90119.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 457

 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 134/316 (42%), Positives = 189/316 (59%), Gaps = 15/316 (4%)

Query: 24  AKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNR------EGNQTYKLSLNEFAD 77
           A+ E W A+  + Y    E+A R   F +N  F+   N        G  +Y L+LN FAD
Sbjct: 37  AQFEAWCAEHGKAYATPGERAARLAAFAENAAFVAAHNDAVASSGPGGPSYTLALNAFAD 96

Query: 78  LTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG-LPRSIDWRARGAVTPVKNQ 136
           LT +EF A+  G ++        + S ++  F   + R G +P ++DWR  GAVT VK+Q
Sbjct: 97  LTHDEFRAARLG-RLAVGPGPLGAPSPSDGGF---EGRVGAVPDALDWRQSGAVTKVKDQ 152

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRS 194
           GSCG CW FSA  A+EGI KI TG L+SLSEQ+++DC  S   GC GG M  A+ ++I++
Sbjct: 153 GSCGACWSFSATGAMEGINKITTGSLLSLSEQELIDCDRSYNTGCGGGLMTYAYKFVIKN 212

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDAS 253
            G+  E  YP++  +G CN  +       I  Y++VP+S E  L  AV++QP+SV I  S
Sbjct: 213 GGIDTEDDYPFREADGTCNKNKLKKHVVTIDGYKEVPSSKEDLLLQAVAQQPISVGICGS 272

Query: 254 SPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV 313
           +  F+ YS G+F GPC  +L+HAV IVGYGS     YW++KNSWG+ WG  G++ M R+ 
Sbjct: 273 ARAFQLYSQGIFDGPCPTSLDHAVLIVGYGSEGGKDYWIVKNSWGERWGMKGYMHMHRNT 332

Query: 314 G-GAGLCGIARKASYP 328
           G  +G+CGI   AS+P
Sbjct: 333 GSSSGICGINMMASFP 348


>gi|310942960|pdb|3P5W|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi)
          Length = 220

 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 116/216 (53%), Positives = 153/216 (70%), Gaps = 4/216 (1%)

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---S 174
           LP  +DWR+ GAV  +K+QG CG CW FS +AAVEGI KI TG LISLSEQ+++DC    
Sbjct: 1   LPDYVDWRSSGAVVDIKDQGQCGSCWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQ 60

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TS 233
            +RGC GG+M D F +II + G+  E  YPY   EG CN      K   I +Y++VP  +
Sbjct: 61  NTRGCDGGFMTDGFQFIINNGGINTEANYPYTAEEGQCNLDLQQEKYVSIDTYENVPYNN 120

Query: 234 ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLI 293
           E AL+ AV+ QPVSVA++A+   F++YS G+F GPCG  ++HAVTIVGYG+     YW++
Sbjct: 121 EWALQTAVAYQPVSVALEAAGYNFQHYSSGIFTGPCGTAVDHAVTIVGYGTEGGIDYWIV 180

Query: 294 KNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           KNSWG  WGE G++R++R+VGG G CGIA+KASYP+
Sbjct: 181 KNSWGTTWGEEGYMRIQRNVGGVGQCGIAKKASYPV 216


>gi|395856027|ref|XP_003800444.1| PREDICTED: cathepsin K [Otolemur garnettii]
          Length = 329

 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/336 (41%), Positives = 203/336 (60%), Gaps = 23/336 (6%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           ML+ MV++A         E+ +  + ELW     + Y ++ ++  R  I++KN ++I   
Sbjct: 7   MLLPMVSFA------LYPEEILDTQWELWKKTHRKEYDSKVDEISRRLIWEKNLKYISIH 60

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N E   G  TY+L++N   D+T EE +   TG K+P       S+S++N+    PD    
Sbjct: 61  NLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPP------SRSHSNDTLYIPDWEGR 114

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGS 176
            P SID+R +G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S +
Sbjct: 115 APDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSDN 174

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SEL 235
            GC GG+M +AF Y+ +++G+  E  YPY  ++  C +     KAA+ R Y+++P  +E 
Sbjct: 175 DGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESCMYNPTG-KAAKCRGYREIPEGNEK 233

Query: 236 ALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWL 292
           AL+ AV+R  P+SV IDAS   F++YS GV+     N  N+NHAV  VGYG      +W+
Sbjct: 234 ALKRAVARVGPISVGIDASLTSFQFYSKGVYYDESCNSDNVNHAVLAVGYGIQKGNKHWI 293

Query: 293 IKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           IKNSWG+NWG  G+I M R+   A  CGIA  AS+P
Sbjct: 294 IKNSWGENWGNKGYILMARNKNNA--CGIANLASFP 327


>gi|260516678|gb|ACX43965.1| cysteine protease 1 [Brachiaria hybrid cultivar]
          Length = 338

 Score =  246 bits (627), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 142/323 (43%), Positives = 187/323 (57%), Gaps = 24/323 (7%)

Query: 12  VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLS 71
           V S  + +D  +A    +M Q ++ Y + AE + RF  FK N   I   N   N +Y + 
Sbjct: 32  VPSEVMLQDMFTA----FMKQYSKAY-SHAEFSSRFNQFKANVETIRLHNTLANASYTMG 86

Query: 72  LNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVT 131
           LNEFADL+ EEF   + GYK   R  +      +NN           P SIDWR   AVT
Sbjct: 87  LNEFADLSFEEFKGKYFGYKHVEREFAR-----SNN---LHQEVEAAPTSIDWRTSNAVT 138

Query: 132 PVKNQGSCGCCWIFSAVAAVEGITKIRTGR-LISLSEQQVLDCS---GSRGCYGGWMDDA 187
           P+K+QG CG CW FSA  ++EG   ++    L SLSEQQ++DCS   G  GC GG MD A
Sbjct: 139 PIKDQGQCGSCWAFSATGSIEGAWVLQGKHTLTSLSEQQLVDCSTSYGDAGCNGGLMDYA 198

Query: 188 FSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAV-SRQP 245
           F YII ++G+  E  YPY+   G C  Q+   K   I  Y+DV +  E +L  AV +  P
Sbjct: 199 FEYIIANKGICAESAYPYKGVGGLC--QKSCTKVVTISGYKDVASGDEASLLNAVGTVGP 256

Query: 246 VSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGG 305
           VSVAI+A   GF++YS GVF+G CG+NL+H V  VGYG++    YW++KNSWG +WGE G
Sbjct: 257 VSVAIEADQAGFQFYSSGVFSGTCGHNLDHGVLAVGYGTTGSQDYWIVKNSWGTSWGESG 316

Query: 306 FIRMRRDVGGAGLCGIARKASYP 328
           +IRM R+      CGIA + SYP
Sbjct: 317 YIRMIRN---KNQCGIAIQPSYP 336


>gi|836934|gb|AAA95998.1| cathepsin X [Homo sapiens]
          Length = 329

 Score =  246 bits (627), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 140/326 (42%), Positives = 197/326 (60%), Gaps = 18/326 (5%)

Query: 12  VMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQT 67
           V+S  L+ + I   H ELW     + Y N+ ++     I++KN ++I   N E   G  T
Sbjct: 11  VVSFALYPEEILDTHWELWKKTHRKQYNNKVDEISPRLIWEKNLKYISIHNLEASLGVHT 70

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           Y+L++N   D+T EE +   TG K+P       S S +N+    P+     P S+D+R +
Sbjct: 71  YELAMNHLGDMTSEEVVQKMTGLKVPL------SHSRSNDTLYIPEWEGRAPDSVDYRKK 124

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDD 186
           G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + GC GG+M +
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 184

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ- 244
           AF Y+ +++G+  E  YPY  +E  C +     KAA+ R Y+++P  +E AL+ AV+R  
Sbjct: 185 AFQYVQKNRGIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVG 243

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
           PVSVAIDAS   F++YS GV+     N  NLNHAV  VGYG      +W+IKNSWG+NWG
Sbjct: 244 PVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 303

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYP 328
             G+I M R+   A  CGIA  AS+P
Sbjct: 304 NKGYILMARNKNNA--CGIANLASFP 327


>gi|164472556|gb|ABY58967.1| cathepsin L [Toxoplasma gondii]
          Length = 421

 Score =  246 bits (627), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 125/307 (40%), Positives = 183/307 (59%), Gaps = 11/307 (3%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           + A  A++Y  + EK  R+ IFK N  +I   N++G  +Y L +N F DL+ +EF   + 
Sbjct: 119 FQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQG-YSYSLKMNHFGDLSRDEFRRKYL 177

Query: 89  GYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAV 148
           G+K  +RN+ +     A        S   LP  +DWR+RG VTPVK+Q  CG CW FS  
Sbjct: 178 GFK-KSRNLKSHHLGVATELLNVLPSE--LPAGVDWRSRGCVTPVKDQRDCGSCWAFSTT 234

Query: 149 AAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPY 205
            A+EG    +TG+L+SLSEQ+++DCS   G++ C GG M+DAF Y++ S G+  E  YPY
Sbjct: 235 GALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVLDSGGICSEDAYPY 294

Query: 206 QRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGV 264
             R+  C  Q    K  +I  ++DVP  SE A++ A+++ PVS+AI+A    F++Y  GV
Sbjct: 295 LARDEECRAQ-SCEKVVKILGFKDVPRRSEAAMKAALAKSPVSIAIEADQMPFQFYHEGV 353

Query: 265 FAGPCGNNLNHAVTIVGYGSSNEGP--YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIA 322
           F   CG +L+H V +VGYG+  E    +W++KNSWG  WG  G++ M    G  G CG+ 
Sbjct: 354 FDASCGTDLDHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKGEEGQCGLL 413

Query: 323 RKASYPI 329
             AS+P+
Sbjct: 414 LDASFPV 420


>gi|324983200|gb|ADY68475.1| stem bromelain [Ananas comosus]
          Length = 291

 Score =  246 bits (627), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 132/289 (45%), Positives = 175/289 (60%), Gaps = 16/289 (5%)

Query: 1   MLIIMVTWASL-VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
            L + V WAS    SR    D +  + E WMA+  R YK+  EK  RF+IFK N   IE 
Sbjct: 11  FLFLCVMWASPSAASRDEPSDPMMKRFEEWMAEYGRVYKDNDEKMRRFQIFKNNVNHIET 70

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSR-RGL 118
           FN     +Y L +N+F D+T+ EF+A +TG      NI  +          + D     +
Sbjct: 71  FNNRNGNSYTLGINKFTDMTNNEFVAQYTGGISRPLNIEKEPV------VSFDDVNISAV 124

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRG 178
            +SIDWR  GAVT VK+Q  CG CW FSA+A VEGI KI TG L+SLSEQ+VLDC+ S G
Sbjct: 125 GQSIDWRDYGAVTEVKDQNPCGSCWAFSAIATVEGIYKIVTGYLVSLSEQEVLDCAVSNG 184

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYC---NWQRGAMKAARIRSYQDV-PTSE 234
           C GG++D+A+ +II + G+  E  YPYQ  +G C   +W      +A I  Y  V    E
Sbjct: 185 CDGGFVDNAYDFIISNNGVASEADYPYQAYQGDCAANSWP----NSAYITGYSYVRSNDE 240

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYG 283
            +++YAV  QP++ AIDAS   F+YY+GGVF+GPCG +LNHA+TI+GYG
Sbjct: 241 SSMKYAVWNQPIAAAIDASGDNFQYYNGGVFSGPCGTSLNHAITIIGYG 289


>gi|255544115|ref|XP_002513120.1| cysteine protease, putative [Ricinus communis]
 gi|223548131|gb|EEF49623.1| cysteine protease, putative [Ricinus communis]
          Length = 362

 Score =  246 bits (627), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 129/261 (49%), Positives = 169/261 (64%), Gaps = 13/261 (4%)

Query: 8   WASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQT 67
           W S  M+RTL E S+  +HE WMA  AR YK+  EK MR+KIFK+N + I+ FN E +++
Sbjct: 21  WTSQCMARTLQEASMYERHEQWMASYARVYKDANEKQMRYKIFKENVQRIDSFNSESDKS 80

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           YKL++N+FADLT+EEF +   G+K    +       Y N           +P SIDWR +
Sbjct: 81  YKLAVNQFADLTNEEFKSLRNGFKGHMCSAQAGHFRYEN--------VTAVPASIDWRKK 132

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSRGCYGGWM 184
           GAVT +K QG CG CW FSAVAAVEGIT+I+TG+LISLSEQ+++DC   S  +GC GG M
Sbjct: 133 GAVTQIKEQGQCGSCWAFSAVAAVEGITEIKTGKLISLSEQELVDCDTNSEDQGCQGGLM 192

Query: 185 DDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSR 243
           DDAF + I   GL  E  YPY   +  C  +  A  +A+I  Y+DVP + E AL+ AV+ 
Sbjct: 193 DDAFKF-IEQHGLASEATYPYDAADSTCKTKEEAKPSAKITGYEDVPANDEAALKNAVAN 251

Query: 244 QPVSVAIDASSPGFRYYSGGV 264
           QPVSVAIDA    F++YS G+
Sbjct: 252 QPVSVAIDAGGFEFQFYSSGI 272


>gi|355681653|gb|AER96814.1| cathepsin K [Mustela putorius furo]
          Length = 329

 Score =  246 bits (627), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 138/335 (41%), Positives = 201/335 (60%), Gaps = 20/335 (5%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
            ++++  AS+ +     E+ +  + ELW     + Y N+ ++  R  I++KN + I   N
Sbjct: 6   FLLLLPMASIAL---YPEEILDTQWELWKKTYGKQYNNKVDEISRRLIWEKNLKHISIHN 62

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL 118
            E   G  TY+L++N   D+T EE +   TG K+P       S S +N+    PD     
Sbjct: 63  LEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPP------SHSRSNDSLYIPDWESRA 116

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSR 177
           P SID+R +G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + 
Sbjct: 117 PDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND 176

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GG+M +AF Y+ +++G+  E  YPY  ++  C +     KAA+ + Y+++P  +E A
Sbjct: 177 GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESCMYNPTG-KAAKCKGYREIPEGNEKA 235

Query: 237 LRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWLI 293
           L+ AV+R  P+SVAIDAS   F++YS GV+     N  NLNHAV  VGYG      +W+I
Sbjct: 236 LKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGVQKGNKHWII 295

Query: 294 KNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           KNSWG+NWG  G+I M R+   A  CGIA  AS+P
Sbjct: 296 KNSWGENWGNKGYILMARNKNNA--CGIANLASFP 328


>gi|130502110|ref|NP_001076110.1| cathepsin K precursor [Oryctolagus cuniculus]
 gi|1168794|sp|P43236.1|CATK_RABIT RecName: Full=Cathepsin K; AltName: Full=Protein OC-2; Flags:
           Precursor
 gi|454187|dbj|BAA03125.1| OC-2 protein [Oryctolagus cuniculus]
          Length = 329

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/326 (42%), Positives = 201/326 (61%), Gaps = 18/326 (5%)

Query: 12  VMSRTLH-EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQT 67
           V+S  LH E+ +  + ELW    ++ Y ++ ++  R  I++KN + I   N E   G  T
Sbjct: 11  VVSFALHPEEILDTQWELWKKTYSKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHT 70

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           Y+L++N   D+T EE +   TG K+P       S+S++N+    PD     P SID+R +
Sbjct: 71  YELAMNHLGDMTSEEVVQKMTGLKVPP------SRSHSNDTLYIPDWEGRTPDSIDYRKK 124

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDD 186
           G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + GC GG+M +
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENYGCGGGYMTN 184

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ- 244
           AF Y+ R++G+  E  YPY  ++  C +     KAA+ R Y+++P  +E AL+ AV+R  
Sbjct: 185 AFQYVQRNRGIDSEDAYPYVGQDESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVG 243

Query: 245 PVSVAIDASSPGFRYYSGGVF--AGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
           PVSVAIDAS   F++YS GV+       +N+NHAV  VGYG      +W+IKNSWG++WG
Sbjct: 244 PVSVAIDASLTSFQFYSKGVYYDENCSSDNVNHAVLAVGYGIQKGNKHWIIKNSWGESWG 303

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYP 328
             G+I M R+   A  CGIA  AS+P
Sbjct: 304 NKGYILMARNKNNA--CGIANLASFP 327


>gi|47523662|ref|NP_999467.1| cathepsin K precursor [Sus scrofa]
 gi|15213940|sp|Q9GLE3.1|CATK_PIG RecName: Full=Cathepsin K; Flags: Precursor
 gi|10048286|gb|AAG12340.1|AF292030_1 cathepsin K precursor [Sus scrofa]
          Length = 330

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/326 (43%), Positives = 198/326 (60%), Gaps = 18/326 (5%)

Query: 12  VMSRTLH-EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQT 67
           VMS  L+ E+ +  + ELW     + Y ++ ++  R  I++KN + I   N E   G  T
Sbjct: 12  VMSSALYPEEILDTQWELWKKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHT 71

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           Y+L++N   D+T EE +   TG K+P       S S +N+    PD     P SID+R +
Sbjct: 72  YELAMNHLGDMTSEEVVQKMTGLKVPP------SHSRSNDTLYIPDWEGRTPDSIDYRKK 125

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDD 186
           G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + GC GG+M +
Sbjct: 126 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 185

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ- 244
           AF Y+ +++G+  E  YPY  ++  C +     KAA+ R Y+++P  +E AL+ AV+R  
Sbjct: 186 AFQYVQKNRGIDSEDAYPYVGQDENCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVG 244

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
           PVSVAIDAS   F++YS GV+     N  NLNHAV  VGYG      +W+IKNSWG+NWG
Sbjct: 245 PVSVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGKKHWIIKNSWGENWG 304

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYP 328
             G+I M R+   A  CGIA  AS+P
Sbjct: 305 NKGYILMARNKNNA--CGIANLASFP 328


>gi|115464789|ref|NP_001055994.1| Os05g0508300 [Oryza sativa Japonica Group]
 gi|48475189|gb|AAT44258.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113579545|dbj|BAF17908.1| Os05g0508300 [Oryza sativa Japonica Group]
          Length = 450

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 131/308 (42%), Positives = 183/308 (59%), Gaps = 8/308 (2%)

Query: 24  AKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEF 83
           A+ E W A+  R+Y    E+A R   F  N  F+   N     +Y L+LN FADLT +EF
Sbjct: 36  AQFEAWCAEHGRSYATPGERAARLAAFADNAAFVAAHNG-APASYALALNAFADLTHDEF 94

Query: 84  IASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCW 143
            A+  G             +    + G       +P ++DWR  GAVT VK+QGSCG CW
Sbjct: 95  RAARLGRLAAAGGPGRDGGA---PYLGVDGGVGAVPDAVDWRQSGAVTKVKDQGSCGACW 151

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQGLTDER 201
            FSA  A+EGI KI+TG LISLSEQ+++DC  S   GC GG MD A+ +++++ G+  E 
Sbjct: 152 SFSATGAMEGINKIKTGSLISLSEQELIDCDRSYNSGCGGGLMDYAYKFVVKNGGIDTEA 211

Query: 202 VYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYY 260
            YPY+  +G CN  +   +   I  Y+DVP + E  L  AV++QPVSV I  S+  F+ Y
Sbjct: 212 DYPYRETDGTCNKNKLKRRVVTIDGYKDVPANNEDMLLQAVAQQPVSVGICGSARAFQLY 271

Query: 261 SGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLC 319
           S G+F GPC  +L+HA+ IVGYGS     YW++KNSWG++WG  G++ M R+ G + G+C
Sbjct: 272 SKGIFDGPCPTSLDHAILIVGYGSEGGKDYWIVKNSWGESWGMKGYMYMHRNTGNSNGVC 331

Query: 320 GIARKASY 327
           GI +  S+
Sbjct: 332 GINQMPSF 339


>gi|449500383|ref|XP_004161083.1| PREDICTED: vignain-like [Cucumis sativus]
          Length = 345

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 143/329 (43%), Positives = 200/329 (60%), Gaps = 11/329 (3%)

Query: 9   ASLVMSRTLHEDSISAKHELWM-----AQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE 63
           + L  S    E  ++ +  LW       +     +N  EK  RF +FK+N   +   N+ 
Sbjct: 18  SGLAESFEFDEKELATEESLWQLYERWGKHHTISRNLKEKHKRFSVFKENVNHVFTVNQM 77

Query: 64  GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSID 123
            ++ YKL LN+FAD+++ EF+  +    +      ++ +  A  +    D+   LP S+D
Sbjct: 78  -DKPYKLKLNKFADMSNYEFVNFYARSNISHYRKLHERRRGAGGFMYEQDTD--LPSSVD 134

Query: 124 WRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-GSRGCYGG 182
            R RGAV  VK QG CG CW FS+VAAVEGI KI+T +L+SLSEQ++LDC+  ++GC GG
Sbjct: 135 GRERGAVNAVKEQGRCGSCWAFSSVAAVEGINKIKTNQLLSLSEQELLDCNYRNKGCNGG 194

Query: 183 WMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVS 242
           +M+ AF +I R+ G+  E  YPY    G C   R +    +I  Y+ VP +E AL  AV+
Sbjct: 195 FMEIAFDFIKRNGGIATENSYPYHGSRGLCRSSRISSPIVKIDGYESVPENEDALMQAVA 254

Query: 243 RQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNW 301
            QPVSVAIDA+   F++YS GVF G CG  LNH V  +GYG++ +G  YWL++NSWG  W
Sbjct: 255 NQPVSVAIDAAGRDFQFYSQGVFDGYCGTELNHGVVAIGYGTTEDGTDYWLVRNSWGVGW 314

Query: 302 GEGGFIRMRRDVGGA-GLCGIARKASYPI 329
           GE G++RM+R V  A GLCGIA +ASYPI
Sbjct: 315 GEDGYVRMKRGVEQAEGLCGIAMEASYPI 343


>gi|6650705|gb|AAF21977.1|AF115280_1 thiolproteinase SmTP1 [Sarcocystis muris]
          Length = 394

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 126/308 (40%), Positives = 185/308 (60%), Gaps = 23/308 (7%)

Query: 35  RTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYK--- 91
           + Y  + E+  R+ IFK N  +I   N +G  +Y L +N+F DLT EEF   + GYK   
Sbjct: 98  KFYATEEERLKRYAIFKNNLTYIHNHNMQG-YSYVLKMNKFGDLTLEEFRQRYLGYKKPD 156

Query: 92  --MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVA 149
              P R +    +S  +N          +P  +DWR RG VT VK+QG CG CW FSA  
Sbjct: 157 LRTPPREVDTTLESVEDN---------DIPTHVDWRQRGCVTSVKDQGDCGSCWAFSATG 207

Query: 150 AVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQ 206
           A+EG+   +TG+L++LS+QQ++DCS   G++GC GG M++AF Y++ + G+     YPY 
Sbjct: 208 AMEGVYCAKTGKLVNLSQQQLVDCSRFLGNQGCDGGRMEEAFEYVVENGGICSGENYPYM 267

Query: 207 RREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVS-RQPVSVAIDASSPGFRYYSGGV 264
           R++G C   +     A I  Y+ VP  SE +++ A++ R PVSVAI A+   F++Y  G+
Sbjct: 268 RKDGVCKSSQ-CTSVATITGYRSVPRRSEKSMKTALALRSPVSVAIQANQAAFQFYYDGI 326

Query: 265 FAGPCGNNLNHAVTIVGYG--SSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIA 322
           F  PCG NL+H V +VGY   ++ +G YW++KNSWG  WG+GG++ M    G AG CG+ 
Sbjct: 327 FDAPCGTNLDHGVLLVGYSAETAGQGDYWIMKNSWGAAWGKGGYMLMAMHKGPAGQCGVL 386

Query: 323 RKASYPIA 330
              S+P+A
Sbjct: 387 LDGSFPVA 394


>gi|343978787|gb|AEM76722.1| cathepsin L-like proteinase [Triatoma brasiliensis]
          Length = 330

 Score =  245 bits (625), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/341 (40%), Positives = 203/341 (59%), Gaps = 22/341 (6%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           M +++V  A + +S      +I+ +  E +     + YKNQ E+  R KIF  N + IE 
Sbjct: 1   MKVLLVAVAVIAVSCANRFYNINPEEWETFKVVHGKNYKNQFEEMFRRKIFMNNKKRIEA 60

Query: 60  FN---REGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRR 116
            N    +G  +YK+ +N F DL   E  A   G+KM T N   + + Y      +P + +
Sbjct: 61  HNAKYEQGEVSYKMKMNHFGDLMSHEIKALMNGFKM-TPNTKREGKIY------FPSNDK 113

Query: 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-- 174
            LP+S+DWR +GAVTPVK+QG CG CW FSA  ++EG   ++ G+L+SLSEQ ++DCS  
Sbjct: 114 -LPKSVDWRQKGAVTPVKDQGQCGSCWSFSATGSLEGQIFLKKGKLVSLSEQNLMDCSKE 172

Query: 175 -GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT- 232
            G+ GC GG MD AF Y+  ++G+  E  YPY+ R+  C +++  +     + Y D+P  
Sbjct: 173 YGNNGCEGGLMDKAFQYVSDNKGIDTESSYPYEARDYACRFKKDKVGGTD-KGYVDIPEG 231

Query: 233 SELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGN-NLNHAVTIVGYGSSNEGP 289
            E AL+ A++   P+SVAIDAS   F +YS GV+  P C + +L+H V  VGYG+ N   
Sbjct: 232 DEKALQNALATVGPISVAIDASHESFHFYSEGVYNEPYCSSYDLDHGVLAVGYGTENGQD 291

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           YWL+KNSWG +WGE G+I++ R+   +  CGIA  ASYPI 
Sbjct: 292 YWLVKNSWGPSWGESGYIKIARN--HSNHCGIASMASYPIV 330


>gi|4469155|emb|CAB38315.1| chymopapain isoform III [Carica papaya]
          Length = 361

 Score =  245 bits (625), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 127/304 (41%), Positives = 185/304 (60%), Gaps = 9/304 (2%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           WM +  + Y++  EK  RF+IF+ N  +I++ N++ N +Y L LN FADL+++EF   + 
Sbjct: 51  WMLKHNKIYESIDEKIYRFEIFRDNLMYIDETNKK-NNSYWLGLNGFADLSNDEFKKKYV 109

Query: 89  GYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAV 148
           G+           + + N  F Y       P+SIDWRA+GAVTPVKNQG+CG CW FS +
Sbjct: 110 GF---VAEDFTGLEHFDNEDFTYKHVTN-YPQSIDWRAKGAVTPVKNQGACGSCWAFSTI 165

Query: 149 AAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQR 207
           A VEGI KI TG L+ LSEQ+++DC   S GC GG+   +  Y + + G+   +VYP Q 
Sbjct: 166 ATVEGINKIVTGNLLELSEQELVDCDKHSYGCKGGYQTTSLQY-VANNGVHTSKVYPCQA 224

Query: 208 REGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFA 266
           ++  C          +I  Y+ VP++ E +   A++ QP+S  ++A    F+ Y  GVF 
Sbjct: 225 KQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSFLVEAGGKPFQLYKSGVFD 284

Query: 267 GPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKA 325
           GPCG  L+HAVT VGYG+S+   Y +IKNSWG NWGE G++R++R  G + G CG+ + +
Sbjct: 285 GPCGTKLDHAVTAVGYGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSS 344

Query: 326 SYPI 329
            YP 
Sbjct: 345 YYPF 348


>gi|357122137|ref|XP_003562772.1| PREDICTED: fruit bromelain-like [Brachypodium distachyon]
          Length = 358

 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 139/319 (43%), Positives = 195/319 (61%), Gaps = 34/319 (10%)

Query: 35  RTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPT 94
           RTY +  E+  RF+++++N  +IE  NR G+ TY+L  N+FADLT +EF A +T   MP 
Sbjct: 49  RTYASPEERLRRFEVYRRNVDYIEAMNRRGDLTYELGENQFADLTVQEFRAMYT---MPA 105

Query: 95  R-------------------NISNQSQSYANNWFGYPDS-RRGLPRSIDWRARGAVTPVK 134
           R                    ++    SY      Y D+     P S+DWR++GAVTPVK
Sbjct: 106 RVDSRPDAWRRRQMITTLAGPVTEDGGSY------YSDAWEEAGPTSVDWRSKGAVTPVK 159

Query: 135 NQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRGCYGGWMDD-AFSYIIR 193
           +QG CGCCW F+ VA +EG+ KI+TG+L+SLSEQ+++DC  +    GG + + A  ++  
Sbjct: 160 DQGGCGCCWAFATVATIEGLHKIKTGQLVSLSEQELVDCDDADDGCGGGLPEIAMEWVAH 219

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDA 252
           + GLT E  YPY  + G C+  + +  AA+I + Q V   SE  L  AV+RQPV+VAI+A
Sbjct: 220 NGGLTTEANYPYTGKAGKCDRGKASNHAAKIAAAQMVRANSEAELERAVARQPVAVAINA 279

Query: 253 SSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRR 311
                 +Y  GV++GPC    +HAVT+VGYG+ N+G  YW+IKNSW + WGE G+ RM+R
Sbjct: 280 PD-SLMFYKSGVYSGPCTAEFDHAVTVVGYGADNKGHKYWIIKNSWAETWGEKGYGRMQR 338

Query: 312 DVGG-AGLCGIARKASYPI 329
            V    GLCGIA  ASYP+
Sbjct: 339 GVAAKEGLCGIATHASYPV 357


>gi|12803615|gb|AAH02642.1| Cathepsin S [Homo sapiens]
 gi|49456313|emb|CAG46477.1| CTSS [Homo sapiens]
 gi|60821573|gb|AAX36579.1| cathepsin S [synthetic construct]
 gi|189069420|dbj|BAG37086.1| unnamed protein product [Homo sapiens]
 gi|261858586|dbj|BAI45815.1| cathepsin S [synthetic construct]
          Length = 331

 Score =  244 bits (624), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 139/342 (40%), Positives = 198/342 (57%), Gaps = 30/342 (8%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           ++ +++  +S V    LH+D     H  LW     + YK + E+A+R  I++KN +F+  
Sbjct: 4   LVCVLLVCSSAVAQ--LHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVML 61

Query: 60  FNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPD 113
            N E   G  +Y L +N   D+T EE ++  +  ++P+   RNI+ +S     NW     
Sbjct: 62  HNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRNITYKSNP---NWI---- 114

Query: 114 SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
               LP S+DWR +G VT VK QGSCG CW FSAV A+E   K++TG+L+SLS Q ++DC
Sbjct: 115 ----LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDC 170

Query: 174 S----GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQD 229
           S    G++GC GG+M  AF YII ++G+  +  YPY+  +  C +     +AA    Y +
Sbjct: 171 STEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYD-SKYRAATCSKYTE 229

Query: 230 VPTS-ELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSN 286
           +P   E  L+ AV+ + PVSV +DA  P F  Y  GV+  P C  N+NH V +VGYG  N
Sbjct: 230 LPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLN 289

Query: 287 EGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
              YWL+KNSWG N+GE G+IRM R+ G    CGIA   SYP
Sbjct: 290 GKEYWLVKNSWGHNFGEEGYIRMARNKGNH--CGIASFPSYP 329


>gi|61368403|gb|AAX43172.1| cathepsin S [synthetic construct]
          Length = 332

 Score =  244 bits (624), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 138/342 (40%), Positives = 198/342 (57%), Gaps = 30/342 (8%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           ++ +++  +S V    LH+D     H  LW     + YK + E+A+R  I++KN +F+  
Sbjct: 4   LVCVLLVCSSAVAQ--LHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVML 61

Query: 60  FNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPD 113
            N E   G  +Y L +N   D+T EE ++  +  ++P+   RNI+ +S           +
Sbjct: 62  HNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRNITYKS-----------N 110

Query: 114 SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
             R LP S+DWR +G VT VK QGSCG CW FSAV A+E   K++TG+L+SLS Q ++DC
Sbjct: 111 PNRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDC 170

Query: 174 S----GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQD 229
           S    G++GC GG+M  AF YII ++G+  +  YPY+  +  C +     +AA    Y +
Sbjct: 171 STEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYD-SKYRAATCSKYTE 229

Query: 230 VPTS-ELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSN 286
           +P   E  L+ AV+ + PVSV +DA  P F  Y  GV+  P C  N+NH V +VGYG  N
Sbjct: 230 LPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLN 289

Query: 287 EGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
              YWL+KNSWG N+GE G+IRM R+ G    CGIA   SYP
Sbjct: 290 GKEYWLVKNSWGHNFGEEGYIRMARNKGNH--CGIASFPSYP 329


>gi|325303202|tpg|DAA34687.1| TPA_inf: cathepsin L-like cysteine proteinase B [Amblyomma
           variegatum]
          Length = 337

 Score =  244 bits (624), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 127/342 (37%), Positives = 202/342 (59%), Gaps = 20/342 (5%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
            +++    A++  +   H++ + A+   + A   + Y+++ E+  R KI+ +N   I + 
Sbjct: 4   FVVLCFLCAAMTAAAITHQELVGAEWSAFKALHGKEYQSETEEYYRLKIYMENRMMIARH 63

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD--SR 115
           N +      +YKL++NE+ D+   EF+++  G++   R+   Q   Y       P+    
Sbjct: 64  NEKYANNKVSYKLAMNEYGDMLHHEFVSTRNGFRRDYRSKPRQGSFYIE-----PEGIED 118

Query: 116 RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS- 174
           + LP+++DWR +GAVTPVKNQG CG CW FS   ++EG    ++G ++SLSEQ ++DCS 
Sbjct: 119 KHLPKTVDWRKKGAVTPVKNQGQCGSCWAFSTTGSLEGQHFRKSGDMVSLSEQNLVDCST 178

Query: 175 --GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT 232
             G+ GC GG MD+AF YI  + G+  E+ YPY   +G C++++  + A     + D+P 
Sbjct: 179 AFGNNGCEGGLMDNAFKYIKANGGIDTEKSYPYNGTDGTCHFKKSDVGATDT-GFVDIPE 237

Query: 233 -SELALRYAVSR-QPVSVAIDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEG 288
            +E  L+ AV+   P+SVAIDAS   F++YS GV+  P     NL+H V +VGYG+ ++ 
Sbjct: 238 GNEHLLKKAVATVGPISVAIDASHQSFQFYSQGVYDEPECSSENLDHGVLVVGYGTKDDQ 297

Query: 289 PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
            YWL+KNSWG  WG+GG+I M R+      CGIA  ASYP+ 
Sbjct: 298 DYWLVKNSWGTTWGDGGYIYMTRNKDNQ--CGIASSASYPLV 337


>gi|23110962|ref|NP_004070.3| cathepsin S isoform 1 preproprotein [Homo sapiens]
 gi|88984046|sp|P25774.3|CATS_HUMAN RecName: Full=Cathepsin S; Flags: Precursor
 gi|60816153|gb|AAX36372.1| cathepsin S [synthetic construct]
 gi|61358282|gb|AAX41541.1| cathepsin S [synthetic construct]
 gi|119573903|gb|EAW53518.1| cathepsin S, isoform CRA_b [Homo sapiens]
 gi|119573904|gb|EAW53519.1| cathepsin S, isoform CRA_b [Homo sapiens]
          Length = 331

 Score =  244 bits (624), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 138/342 (40%), Positives = 198/342 (57%), Gaps = 30/342 (8%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           ++ +++  +S V    LH+D     H  LW     + YK + E+A+R  I++KN +F+  
Sbjct: 4   LVCVLLVCSSAVAQ--LHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVML 61

Query: 60  FNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPD 113
            N E   G  +Y L +N   D+T EE ++  +  ++P+   RNI+ +S           +
Sbjct: 62  HNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRNITYKS-----------N 110

Query: 114 SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
             R LP S+DWR +G VT VK QGSCG CW FSAV A+E   K++TG+L+SLS Q ++DC
Sbjct: 111 PNRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDC 170

Query: 174 S----GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQD 229
           S    G++GC GG+M  AF YII ++G+  +  YPY+  +  C +     +AA    Y +
Sbjct: 171 STEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYD-SKYRAATCSKYTE 229

Query: 230 VPTS-ELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSN 286
           +P   E  L+ AV+ + PVSV +DA  P F  Y  GV+  P C  N+NH V +VGYG  N
Sbjct: 230 LPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLN 289

Query: 287 EGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
              YWL+KNSWG N+GE G+IRM R+ G    CGIA   SYP
Sbjct: 290 GKEYWLVKNSWGHNFGEEGYIRMARNKGNH--CGIASFPSYP 329


>gi|424513619|emb|CCO66241.1| predicted protein [Bathycoccus prasinos]
          Length = 396

 Score =  244 bits (623), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 137/333 (41%), Positives = 195/333 (58%), Gaps = 21/333 (6%)

Query: 15  RTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLS 71
           R L E  I    + W+ +  +   N  E+  R KIF +N+ F+ + N +   G  ++ + 
Sbjct: 61  RVLRESKIEDAFDAWLVKYDKEIANAEERLKRLKIFGENYLFVLEHNAKYVAGKVSHYVE 120

Query: 72  LNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVT 131
           +N+FA  T EE+     G+K   R   +  ++ A +   +       P SIDW   G +T
Sbjct: 121 MNKFAAHTREEY-RKMLGFKKSLRRKKDSGEA-AKDVSLWEYEGVEAPESIDWVDEGVIT 178

Query: 132 PVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAF 188
             KNQGSCG CW FSA+ AVEGI  IRTG+L+SLSEQ+++ C+   G++GC GG MD+AF
Sbjct: 179 TPKNQGSCGSCWAFSAIGAVEGINAIRTGKLVSLSEQELVSCAREGGNQGCNGGLMDNAF 238

Query: 189 SYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVS 247
            +I+ + G+  E+ Y Y+     C  ++  +  A I  + DVP++ E AL+ AVS+QPVS
Sbjct: 239 EWIVENGGVDSEKQYQYKASFDDCKTRKTLLHIASIDGFNDVPSNDETALKKAVSQQPVS 298

Query: 248 VAIDASSPGFRYYSGGVF-AGPCGNNLNHAVTIVGYG----SSN------EGPYWLIKNS 296
           VAI+A    F+ Y GGV+ A  CG  L+H V +VGYG    SSN         YW IKNS
Sbjct: 299 VAIEADQRSFQLYGGGVYHAEDCGTQLDHGVLVVGYGIDHNSSNVIIPGATKKYWKIKNS 358

Query: 297 WGQNWGEGGFIRMRRDVGG-AGLCGIARKASYP 328
           W + WGEGG+IR+ RDV   +G+CG+A  ASYP
Sbjct: 359 WSEQWGEGGYIRIARDVESPSGMCGVAEMASYP 391


>gi|55740406|gb|AAV63979.1| cathepsin L1 precursor [Artemia parthenogenetica]
          Length = 338

 Score =  244 bits (623), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 134/343 (39%), Positives = 204/343 (59%), Gaps = 24/343 (6%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           LI ++    + +S  L   ++ A    L+ A   + Y +Q E+ +R KI+ +N   + K 
Sbjct: 6   LIFLLAAVLVQLSAALSLTNLLADEWHLFKATHKKEYPSQLEEKLRMKIYLENKHKVAKH 65

Query: 61  N---REGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N    +G ++Y++++N+F DL   EF +   GY+   +N S    ++    F  P +   
Sbjct: 66  NILYEKGEKSYQVAMNKFGDLLHHEFRSIMNGYQHKKQNSSRAESTFT---FMEP-ANVE 121

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           +P S+DWR +GA+TPVK+QG CG CW FS+  A+EG T  +TG+L+SLSEQ ++DCS   
Sbjct: 122 VPESVDWREKGAITPVKDQGQCGSCWAFSSTGALEGQTFRKTGKLVSLSEQNLIDCSGKY 181

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNW---QRGAMKAARIRSYQDVP 231
           G+ GC GG MD AF YI  ++G+  E  YPY+  +G C +    RGA+     R + D+P
Sbjct: 182 GNEGCNGGLMDQAFQYIKDNKGIDTENTYPYEAEDGVCRYNPRNRGAVD----RGFVDIP 237

Query: 232 T-SELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGPC--GNNLNHAVTIVGYGSSNE 287
           +  E  L+ AV+   PVSVAIDAS   F++YS G +  P    ++L+H V +VGYGS N 
Sbjct: 238 SGEEDKLKAAVATVGPVSVAIDASHESFQFYSKGXYYEPSCDSDDLDHGVLVVGYGSDNG 297

Query: 288 GPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
             YWL+KNSW ++WG+ G+I++ R+      CG+A  ASYP+ 
Sbjct: 298 EDYWLVKNSWSEHWGDEGYIKIARNRKNH--CGVATAASYPLV 338


>gi|179957|gb|AAC37592.1| cathepsin S [Homo sapiens]
          Length = 331

 Score =  244 bits (622), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 138/342 (40%), Positives = 198/342 (57%), Gaps = 30/342 (8%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           ++ +++  +S V    LH+D     H  LW     + YK + E+A+R  I++KN +F+  
Sbjct: 4   LVCVLLVCSSAVAQ--LHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVML 61

Query: 60  FNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPD 113
            N E   G  +Y L +N   D+T EE ++  +  ++P+   RNI+ +S           +
Sbjct: 62  HNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRNITYKS-----------N 110

Query: 114 SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
             R LP S+DWR +G VT VK QGSCG CW FSAV A+E   K++TG+L+SLS Q ++DC
Sbjct: 111 PNRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDC 170

Query: 174 S----GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQD 229
           S    G++GC GG+M  AF YII ++G+  +  YPY+  +  C +     +AA    Y +
Sbjct: 171 STEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDLKCQYD-SKYRAATCSKYTE 229

Query: 230 VPTS-ELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSN 286
           +P   E  L+ AV+ + PVSV +DA  P F  Y  GV+  P C  N+NH V +VGYG  N
Sbjct: 230 LPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLN 289

Query: 287 EGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
              YWL+KNSWG N+GE G+IRM R+ G    CGIA   SYP
Sbjct: 290 GKEYWLVKNSWGHNFGEEGYIRMARNKGNH--CGIASFPSYP 329


>gi|334324659|ref|XP_001371004.2| PREDICTED: cathepsin K-like [Monodelphis domestica]
          Length = 332

 Score =  244 bits (622), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 138/326 (42%), Positives = 198/326 (60%), Gaps = 18/326 (5%)

Query: 12  VMSRTLH-EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQT 67
           V+S  LH E+ +  + +LW     + Y ++ ++  R  I++KN ++I   N E   G  T
Sbjct: 14  VVSSALHPEEMLDTQWKLWKDSYRKEYNSKVDEISRRLIWEKNLKYISTHNLEFSLGLHT 73

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           ++L++N   D+T EE +   TG K+P       S+S  N+   +PD     P SID+R +
Sbjct: 74  FELAMNHLGDMTSEEVVQKMTGLKVPL------SRSQNNDTLYFPDWETKTPDSIDYRKK 127

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDD 186
           G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + GC GG+M +
Sbjct: 128 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 187

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ- 244
           AF Y+ +++G+  E  YPY   +  C +     KAA+ R Y+++P  SE AL+ AV+R  
Sbjct: 188 AFQYVQKNRGIDSEDAYPYIGEDESCMYNPTG-KAAKCRGYREIPEGSEKALKRAVARVG 246

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
           PV+VAIDAS   F++YS GV+     N  NLNHAV  VGYG      +W+IKNSWG+ WG
Sbjct: 247 PVAVAIDASLSSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQRGTKHWIIKNSWGEQWG 306

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYP 328
             G+I M R+   A  CGIA  AS+P
Sbjct: 307 NKGYILMARNKNNA--CGIANLASFP 330


>gi|242088413|ref|XP_002440039.1| hypothetical protein SORBIDRAFT_09g024940 [Sorghum bicolor]
 gi|241945324|gb|EES18469.1| hypothetical protein SORBIDRAFT_09g024940 [Sorghum bicolor]
          Length = 463

 Score =  244 bits (622), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 134/317 (42%), Positives = 189/317 (59%), Gaps = 15/317 (4%)

Query: 24  AKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQ--------TYKLSLNEF 75
           A  + W A+  + Y    E+A R  +F  N  F+   N   N         +Y L+LN F
Sbjct: 39  ALFDAWCAEHGKAYATPEERAARLAVFADNAAFVAAHNARVNAAGGGGAPPSYTLALNAF 98

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
           ADLT EEF A+  G ++     + +S + A  + G       +P ++DWR  GAVT VK+
Sbjct: 99  ADLTHEEFRAARLG-RIAAGAAALRSPA-APVYRGLDGGLGAVPDALDWRENGAVTKVKD 156

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIR 193
           QGSCG CW FSA  A+EGI KI+TG L+SLSEQ+++DC  S   GC GG MD A+ ++++
Sbjct: 157 QGSCGACWSFSATGAMEGINKIKTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYKFVVK 216

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDA 252
           + G+  E  YPY+  +G CN  +   +   I  Y DVP++ E  L  AV++QPVSV I  
Sbjct: 217 NGGIDTEEDYPYREADGTCNKNKLKKRIVTIDGYSDVPSNKEDLLLQAVAQQPVSVGICG 276

Query: 253 SSPGFRYYS-GGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRR 311
           S+  F+ YS  G+F GPC  +L+HAV IVGYGS     YW++KNSWG++WG  G++ M R
Sbjct: 277 SARAFQLYSQQGIFDGPCPTSLDHAVLIVGYGSEGGKDYWIVKNSWGESWGMKGYMHMHR 336

Query: 312 DVGGA-GLCGIARKASY 327
           + G + G+CGI   AS+
Sbjct: 337 NTGDSKGVCGINMMASF 353


>gi|226499884|ref|NP_001148278.1| thiol protease SEN102 precursor [Zea mays]
 gi|195617112|gb|ACG30386.1| thiol protease SEN102 precursor [Zea mays]
          Length = 374

 Score =  244 bits (622), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 139/331 (41%), Positives = 194/331 (58%), Gaps = 20/331 (6%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQ---TYKLSLNEF 75
           + S+  + + W A   ++Y   AE+  RF+++ +N  +IE  N E      TY+L    +
Sbjct: 43  DSSMIERFQRWKAAYNKSYATVAEERRRFRVYARNMAYIEATNAEAEAAGLTYELGETAY 102

Query: 76  ADLTDEEFIASHTG---YKMPTRNISNQSQSYANNWFG--------YPDSRRGLPRSIDW 124
            DLT++EF+A +T     ++P       +++   +  G        Y +     P S+DW
Sbjct: 103 TDLTNQEFMAMYTAPALAQLPADESVITTRAGPVDAVGGAPGQLPVYVNLSASAPASVDW 162

Query: 125 RARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGW 183
           RA GAVTPVKNQG CG CW FS VA VEGI +IRTG+L+SLSEQ+++DC     GC GG 
Sbjct: 163 RASGAVTPVKNQGRCGSCWAFSTVAVVEGIYQIRTGKLVSLSEQELVDCDTLDDGCDGGI 222

Query: 184 MDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVS 242
              A  +I  + G+T E  YPY      CN  + +  A  I   + V T SE +L  AV+
Sbjct: 223 SYRALRWIASNGGITTEADYPYTGTTDACNRAKLSHNAVSIAGLRRVATRSEASLANAVA 282

Query: 243 RQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP--YWLIKNSWGQN 300
            QPV+V+I+A    F++Y  GV+ GPCG NLNH VT+VGYG        YW++KNSWGQ 
Sbjct: 283 GQPVAVSIEAGGDNFQHYKKGVYNGPCGTNLNHGVTVVGYGQEAAAGDRYWIVKNSWGQG 342

Query: 301 WGEGGFIRMRRDVGGA--GLCGIARKASYPI 329
           WG+ G+IRM++DV G   GLCGIA + SYP+
Sbjct: 343 WGDDGYIRMKKDVAGKPEGLCGIAIRPSYPL 373


>gi|410968296|ref|XP_003990643.1| PREDICTED: cathepsin K [Felis catus]
          Length = 330

 Score =  244 bits (622), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 136/315 (43%), Positives = 192/315 (60%), Gaps = 17/315 (5%)

Query: 22  ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADL 78
           +  + ELW     + Y N+ ++  R  I++KN + I   N E   G  TY+L++N   D+
Sbjct: 23  LDTQWELWKKTYGKQYNNKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDM 82

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
           T EE +   TG K+P       S+S +N+    PD     P SID+R +G VTPVKNQG 
Sbjct: 83  TSEEVVQKMTGLKVPP------SRSRSNDTLYIPDWESRAPDSIDYRKKGYVTPVKNQGQ 136

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYIIRSQGL 197
           CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + GC GG+M +AF Y+ +++G+
Sbjct: 137 CGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGI 196

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVAIDASSP 255
             E  YPY  ++  C +     KAA+ R Y+++P  +E AL+ AV+R  P+SVAIDAS  
Sbjct: 197 DSEDAYPYVGQDESCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLT 255

Query: 256 GFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV 313
            F++YS GV+     N  NLNHAV  VGYG      +W+IKNSWG+NWG  G+I M R+ 
Sbjct: 256 SFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNK 315

Query: 314 GGAGLCGIARKASYP 328
             A  CGIA  AS+P
Sbjct: 316 NNA--CGIANLASFP 328


>gi|357133074|ref|XP_003568153.1| PREDICTED: cysteine proteinase RD21a-like [Brachypodium distachyon]
          Length = 565

 Score =  244 bits (622), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 133/314 (42%), Positives = 180/314 (57%), Gaps = 16/314 (5%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQ--------TYKLSLNEFADL 78
           E W A+  + Y +  E+A R   F  N  F+   N  G          +Y L+LN FADL
Sbjct: 43  EAWCAEHGKAYASPGERAARLAAFADNAAFVAAHNAGGGGAGGSNAAPSYTLALNAFADL 102

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
           T  EF A+  G       +       +   F        +P ++DWR  GAVT VK+QGS
Sbjct: 103 THAEFRAARLG----RLAVGGARAPPSEGGFAGSVGVGAVPEALDWRQSGAVTKVKDQGS 158

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQG 196
           CG CW FSA  A+EGI KI+TG LISLSEQ+++DC  S   GC GG MD A+ ++I++ G
Sbjct: 159 CGACWSFSATGAIEGINKIKTGSLISLSEQELIDCDRSYNAGCGGGLMDYAYRFVIKNGG 218

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSP 255
           +  E  YPY+  +G CN  +       I  Y DVP + E +L  AV++QP+SV I  S+ 
Sbjct: 219 IDTEDDYPYREADGTCNKNKLKRHVVTIDGYSDVPANKEDSLLQAVAQQPISVGICGSAR 278

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG- 314
            F+ YS G+F GPC  +L+HAV IVGYGS     YW++KNSWG+ WG  G++ M R+ G 
Sbjct: 279 AFQLYSQGIFDGPCPTSLDHAVLIVGYGSEGGKDYWIVKNSWGERWGMKGYMHMHRNTGS 338

Query: 315 GAGLCGIARKASYP 328
            +G+CGI   AS+P
Sbjct: 339 SSGICGINMMASFP 352


>gi|354622947|ref|NP_001002938.2| cathepsin S precursor [Canis lupus familiaris]
          Length = 339

 Score =  244 bits (622), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 138/340 (40%), Positives = 198/340 (58%), Gaps = 27/340 (7%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L+ ++   S  +++   + ++     LW    ++ YK + E+  R  I++KN +F+   N
Sbjct: 12  LVGLLPLCSYAVAQVHKDPTLDHHWNLWKKTYSKQYKEENEEVARRLIWEKNLKFVMLHN 71

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPDSR 115
            E   G  +Y L +N   D+T EE I+     ++P+   RN++ +S           +S 
Sbjct: 72  LEHSMGMHSYDLGMNHLGDMTGEEVISLMGSLRVPSQWQRNVTYRS-----------NSN 120

Query: 116 RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS- 174
           + LP S+DWR +G VT VK QGSCG CW FSAV A+E   K++TG+L+SLS Q ++DCS 
Sbjct: 121 QKLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCST 180

Query: 175 ---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP 231
              G++GC GG+M  AF YII + G+  E  YPY+   G C +     +AA    Y ++P
Sbjct: 181 EKYGNKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMNGKCRYD-SKKRAATCSKYTELP 239

Query: 232 -TSELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEG 288
             SE AL+ AV+ + PVSVAIDAS   F  Y  GV+  P C  N+NH V +VGYG+ N  
Sbjct: 240 FGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCTQNVNHGVLVVGYGNLNGK 299

Query: 289 PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
            YWL+KNSWG N+G+ G+IRM R+ G    CGIA   SYP
Sbjct: 300 DYWLVKNSWGLNFGDQGYIRMARNSGNH--CGIASYPSYP 337


>gi|348525618|ref|XP_003450319.1| PREDICTED: cathepsin S-like [Oreochromis niloticus]
          Length = 330

 Score =  243 bits (621), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 136/337 (40%), Positives = 193/337 (57%), Gaps = 20/337 (5%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L+ ++  A+  + R   E S+ A+ E W +   R Y    E+ +R  I++KN R IE  N
Sbjct: 4   LVCVLLLATSALGR-FDESSLDAQWEEWKSTHRREYNGLGEEGIRRAIWEKNMRMIEAHN 62

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL 118
            E   G  ++++ +N   D+T EE +   TG ++P     NQ +S+        D    +
Sbjct: 63  EEAALGIHSFEMGMNHLGDMTSEEVVEKMTGLQIPM----NQERSFT---LAMDDMPSKI 115

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---G 175
           P+S+D+R +G VT VKNQG+CG CW FSA  A+EG     TG+L+ LS Q ++DCS   G
Sbjct: 116 PKSVDYRKKGMVTSVKNQGACGSCWAFSAAGALEGQLAKSTGKLVDLSPQNLVDCSGKYG 175

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SE 234
           + GC GG+M  AF Y+I + G+  +  YPY  R+  C +   A +AA   SYQ +P   E
Sbjct: 176 NHGCNGGFMTRAFQYVIDNHGIDSDASYPYTGRDEQCRYNP-ATRAANCSSYQFLPEGDE 234

Query: 235 LALRYAVSR-QPVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPYWL 292
            AL+ A++   P+SVAIDA  P F +Y  GV+  P C   +NH V  VGYGS N   YWL
Sbjct: 235 NALKQALATIGPISVAIDARRPRFSFYRSGVYNDPSCTQEVNHGVLAVGYGSLNGQDYWL 294

Query: 293 IKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           +KNSWG  +G+ G+IRM R+ G    CGIA  A YP+
Sbjct: 295 VKNSWGSTFGDQGYIRMARNTGNQ--CGIALYACYPV 329


>gi|62510452|sp|Q8HY81.1|CATS_CANFA RecName: Full=Cathepsin S; Flags: Precursor
 gi|27497538|gb|AAO13009.1| cathepsin S preproprotein [Canis lupus familiaris]
          Length = 331

 Score =  243 bits (621), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 138/340 (40%), Positives = 198/340 (58%), Gaps = 27/340 (7%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L+ ++   S  +++   + ++     LW    ++ YK + E+  R  I++KN +F+   N
Sbjct: 4   LVGLLPLCSYAVAQVHKDPTLDHHWNLWKKTYSKQYKEENEEVARRLIWEKNLKFVMLHN 63

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPDSR 115
            E   G  +Y L +N   D+T EE I+     ++P+   RN++ +S           +S 
Sbjct: 64  LEHSMGMHSYDLGMNHLGDMTGEEVISLMGSLRVPSQWQRNVTYRS-----------NSN 112

Query: 116 RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS- 174
           + LP S+DWR +G VT VK QGSCG CW FSAV A+E   K++TG+L+SLS Q ++DCS 
Sbjct: 113 QKLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCST 172

Query: 175 ---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP 231
              G++GC GG+M  AF YII + G+  E  YPY+   G C +     +AA    Y ++P
Sbjct: 173 EKYGNKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMNGKCRYD-SKKRAATCSKYTELP 231

Query: 232 -TSELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEG 288
             SE AL+ AV+ + PVSVAIDAS   F  Y  GV+  P C  N+NH V +VGYG+ N  
Sbjct: 232 FGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCTQNVNHGVLVVGYGNLNGK 291

Query: 289 PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
            YWL+KNSWG N+G+ G+IRM R+ G    CGIA   SYP
Sbjct: 292 DYWLVKNSWGLNFGDQGYIRMARNSGNH--CGIASYPSYP 329


>gi|395535911|ref|XP_003769964.1| PREDICTED: cathepsin K [Sarcophilus harrisii]
          Length = 332

 Score =  243 bits (621), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 137/327 (41%), Positives = 196/327 (59%), Gaps = 17/327 (5%)

Query: 10  SLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQ 66
           S+V S    E+ +  + +LW     + Y ++ ++  R  I++KN ++I   N E   G  
Sbjct: 13  SVVSSAHHPEEMLDTQWKLWKQSYGKEYNSKVDEISRRLIWEKNLKYISTHNLEFSLGLH 72

Query: 67  TYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRA 126
           T++L++N   D+T EE +   TG KMP     N    Y  +W G        P S+D+R 
Sbjct: 73  TFELAMNHLGDMTSEEVVQKMTGLKMPLSRSQNNDTLYIPDWEGR------TPESVDYRK 126

Query: 127 RGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMD 185
           +G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + GC GG+M 
Sbjct: 127 KGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSKNDGCGGGYMT 186

Query: 186 DAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ 244
           +AF Y+  ++G+  E  YPY  ++  C +     KAA+ R Y+++P  SE AL+ AV+R 
Sbjct: 187 NAFQYVQENRGIDSEDAYPYIGQDESCMYNPTG-KAAKCRGYREIPEGSEKALKRAVARV 245

Query: 245 -PVSVAIDASSPGFRYYSGGVFAGP-C-GNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNW 301
            PV+VAIDAS   F++YS GV+    C G+NLNHAV  VGYG      +W+IKNSWG+ W
Sbjct: 246 GPVAVAIDASLSSFQFYSKGVYYDENCNGDNLNHAVLAVGYGIQRGTKHWIIKNSWGEEW 305

Query: 302 GEGGFIRMRRDVGGAGLCGIARKASYP 328
           G  G+I M R+   A  CGIA  AS+P
Sbjct: 306 GNKGYILMARNKKNA--CGIANLASFP 330


>gi|326531188|dbj|BAK04945.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 360

 Score =  243 bits (621), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 133/315 (42%), Positives = 184/315 (58%), Gaps = 15/315 (4%)

Query: 28  LWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASH 87
           +W A   ++Y++  E+  RF++++ N  +IE  NR G+ TY+L  N+FADLT EEFIA  
Sbjct: 44  MWQATHNQSYRSAEERLRRFQVYRDNVEYIETTNRRGDLTYQLGENQFADLTREEFIARF 103

Query: 88  TGYKMPTRNISNQSQSYA---------NNWFGYPDSRRGLPRSIDWRARGAVTPVK-NQG 137
           T Y        +               + W    D     P S+DWRA+GAV P K    
Sbjct: 104 TSYNGDDDRTGDDDSVITTAAVGGGDPDLWSSGGDDVSLDPPSVDWRAKGAVVPPKSQSS 163

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQG 196
           SC   W F AVA +E +  I+TG+L++LSEQQ++DC     GC  G    AF ++I++ G
Sbjct: 164 SCSSSWAFVAVATIESLHAIKTGKLVALSEQQLVDCDQYDGGCNRGTFRRAFHWVIQNGG 223

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSP 255
           LT E  YPY   +G CN  +     A I  +  VP S ELA+++AV+ QPV+ AI+  S 
Sbjct: 224 LTTEAEYPYTAAQGTCNSAKSDHHVAAISGHASVPGSNELAMKHAVATQPVAAAIELGSD 283

Query: 256 GFRYYSGGVFAGPCGNNLNHAVTIVGYGS--SNEGPYWLIKNSWGQNWGEGGFIRMRRDV 313
             ++Y  GV++GPCG  L HAVT+VGYG+  S    YW++KNSWGQ WGE G+IRM+R +
Sbjct: 284 -MQFYKSGVYSGPCGARLEHAVTVVGYGADESTGDKYWIVKNSWGQTWGERGYIRMQRKI 342

Query: 314 GGAGLCGIARKASYP 328
            G GLCGI    +YP
Sbjct: 343 LGPGLCGIMLDVAYP 357


>gi|291398027|ref|XP_002715626.1| PREDICTED: cathepsin S [Oryctolagus cuniculus]
          Length = 331

 Score =  243 bits (621), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 145/340 (42%), Positives = 197/340 (57%), Gaps = 31/340 (9%)

Query: 6   VTWASLVMSRT---LHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           + WA LV S T   LH D     H  LW     + YK + E+A R  I++KN +F+   N
Sbjct: 4   LVWALLVCSSTVAQLHRDPTLDHHWHLWKKAYGKQYKEKNEEAARRLIWEKNLKFVTLHN 63

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMP---TRNISNQSQSYANNWFGYPDSR 115
            E   G  +Y + +N  AD+T EE ++  +  ++P    RN++     Y  N    P+ +
Sbjct: 64  LEHSMGMHSYDVGMNHLADMTSEEVVSLMSSLRIPHQWPRNVT-----YKLN----PNQK 114

Query: 116 RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS- 174
             LP S+DWR RG VT VK QGSCG CW FSAV A+E   K++TG L+SLS Q ++DCS 
Sbjct: 115 --LPDSVDWRERGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGNLVSLSAQNLVDCST 172

Query: 175 ---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP 231
              G++GC GG+M +AF YII + G+  E  YPY+  +  C++     +AA    Y ++P
Sbjct: 173 TKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDQKCHYD-SKHRAATCSKYTELP 231

Query: 232 T-SELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEG 288
             SE AL+ AV+ + PVSVAIDAS   F  Y  GV+  P C  N+NH V  VGYG+    
Sbjct: 232 FGSEEALKEAVANKGPVSVAIDASHSSFFLYRSGVYYEPSCTQNVNHGVLAVGYGNLKGK 291

Query: 289 PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
            YWL+KNSWG ++GE G+IRM R+      CGIA   SYP
Sbjct: 292 DYWLVKNSWGIHFGEQGYIRMARN--SKNHCGIANYPSYP 329


>gi|330803820|ref|XP_003289900.1| hypothetical protein DICPUDRAFT_80649 [Dictyostelium purpureum]
 gi|325080011|gb|EGC33585.1| hypothetical protein DICPUDRAFT_80649 [Dictyostelium purpureum]
          Length = 328

 Score =  243 bits (621), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 142/340 (41%), Positives = 194/340 (57%), Gaps = 25/340 (7%)

Query: 2   LIIMVTWASLVM-----SRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRF 56
           +I+ + +  L++     +R   +       + WM +  ++Y N  E   R+ IF+ N  F
Sbjct: 3   IILALVFCFLIVNCISAARVFSQKQYQTAFQNWMVKHQKSYTND-EFGSRYTIFQDNMDF 61

Query: 57  IEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRR 116
           + K+N++G+ T  L LN  ADLT++E+   + G K   +          N   G  D  +
Sbjct: 62  VTKWNQKGSDTI-LGLNSMADLTNQEYQRIYLGTKTTVKK--------PNLIIGVTDVSK 112

Query: 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS 176
             P S+DWRA GAVT VKNQG CG C+ FS   +VEGI +I + +L+SLSEQQ+LDCSGS
Sbjct: 113 A-PASVDWRANGAVTAVKNQGQCGGCYSFSTTGSVEGIHEITSKQLVSLSEQQILDCSGS 171

Query: 177 R---GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT- 232
               GC GG M ++F YII   GL  E  YPY+   G C + +  +  A I  Y++V + 
Sbjct: 172 EGNNGCDGGLMTNSFEYIIAVGGLDTEASYPYEGVVGKCKFNKANI-GATITGYKNVKSG 230

Query: 233 SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPC--GNNLNHAVTIVGYGSSNEGPY 290
           SE  L+ AV+ QPVSVAIDAS   F+ YS GV+  P      L+H V  VGYGS +   Y
Sbjct: 231 SESDLQTAVAAQPVSVAIDASQNSFQLYSSGVYYEPACSSTQLDHGVLAVGYGSQSGQDY 290

Query: 291 WLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           W++KNSWG +WGE GFI M R+      CGIA  ASYP A
Sbjct: 291 WIVKNSWGADWGEKGFILMARNKHNN--CGIATMASYPTA 328


>gi|301767944|ref|XP_002919404.1| PREDICTED: cathepsin K-like [Ailuropoda melanoleuca]
 gi|281352889|gb|EFB28473.1| hypothetical protein PANDA_008011 [Ailuropoda melanoleuca]
          Length = 330

 Score =  243 bits (621), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 138/335 (41%), Positives = 202/335 (60%), Gaps = 20/335 (5%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           +++++  AS  +     E+ +  + ELW     + Y ++ ++  R  I++KN + I   N
Sbjct: 6   VLLLLPMASFAL---YPEEILDTQWELWKKTYGKQYNSKVDEISRRLIWEKNLKHISIHN 62

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL 118
            E   G  TY+L++N   D+T EE +   TG K+P  +  N    Y  +W    +SR   
Sbjct: 63  LEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSHSRNNDTLYIPDW----ESRA-- 116

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSR 177
           P SID+R +G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + 
Sbjct: 117 PDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND 176

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GG+M +AF Y+ +++G+  E  YPY  ++  C +     KAA+ R Y+++P  +E A
Sbjct: 177 GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESCMYNPTG-KAAKCRGYREIPEGNEKA 235

Query: 237 LRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWLI 293
           L+ AV+R  P+SVAIDAS   F++YS GV+     N  NLNHAV  VGYG      +W+I
Sbjct: 236 LKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWII 295

Query: 294 KNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           KNSWG+NWG  G+I M R+   A  CGIA  AS+P
Sbjct: 296 KNSWGENWGNKGYILMARNKNNA--CGIANLASFP 328


>gi|179959|gb|AAA35655.1| cathepsin [Homo sapiens]
 gi|248406|gb|AAB22005.1| cathepsin S [Homo sapiens]
          Length = 331

 Score =  243 bits (621), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 137/342 (40%), Positives = 198/342 (57%), Gaps = 30/342 (8%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           ++ +++  +S V    LH+D     H  LW     + YK + E+A+R  I++KN +F+  
Sbjct: 4   LVCVLLVCSSAVAQ--LHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVML 61

Query: 60  FNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPD 113
            N E   G  +Y L +N   D+T EE ++  +  ++P+   RNI+ +S           +
Sbjct: 62  HNLEHSMGMHSYDLGMNHLGDMTSEEVMSLTSSLRVPSQWQRNITYKS-----------N 110

Query: 114 SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
             R LP S+DWR +G VT VK QGSCG CW FSAV A+E   K++TG+L++LS Q ++DC
Sbjct: 111 PNRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVTLSAQNLVDC 170

Query: 174 S----GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQD 229
           S    G++GC GG+M  AF YII ++G+  +  YPY+  +  C +     +AA    Y +
Sbjct: 171 STEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYD-SKYRAATCSKYTE 229

Query: 230 VPTS-ELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSN 286
           +P   E  L+ AV+ + PVSV +DA  P F  Y  GV+  P C  N+NH V +VGYG  N
Sbjct: 230 LPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLN 289

Query: 287 EGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
              YWL+KNSWG N+GE G+IRM R+ G    CGIA   SYP
Sbjct: 290 GKEYWLVKNSWGHNFGEEGYIRMARNKGNH--CGIASFPSYP 329


>gi|151573014|gb|ABS17682.1| cathepsin L-1 [Artemia salina]
          Length = 334

 Score =  243 bits (621), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 135/343 (39%), Positives = 202/343 (58%), Gaps = 24/343 (6%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           LI ++    + +S  L   ++ A    L+ A   + Y +Q E+  R KI+ +N   + K 
Sbjct: 2   LIFLLGAVLVQLSAALSLTNLLADEWHLFKATHKKEYPSQLEEKFRMKIYLENKHKVAKH 61

Query: 61  N---REGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N    +G ++Y +++N+F DL   EF +   GY+   +N S    ++    F  P +   
Sbjct: 62  NILYEKGEKSYHVAMNKFGDLLHHEFRSIMNGYQHKKQNSSRAESTFT---FMEP-ANVT 117

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           +P S+DWR +GA+TPVK+QG CG CW FS+  A+EG T  +TG+L+SLSEQ ++DCS   
Sbjct: 118 VPESVDWREKGAITPVKDQGQCGSCWAFSSTGALEGQTFRKTGKLVSLSEQNLIDCSGKY 177

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNW---QRGAMKAARIRSYQDVP 231
           G+ GC GG MD AF YI  ++G+  E  YPY+  +  C +    RGA+     R + D+P
Sbjct: 178 GNEGCNGGLMDQAFQYIKDNKGIDTENTYPYEAEDDVCRYNPRNRGAVD----RGFVDIP 233

Query: 232 T-SELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGPC--GNNLNHAVTIVGYGSSNE 287
           +  E  L+ AV+   PVSVAIDAS   F++YS GV+  P    ++L+H V +VGYGS N 
Sbjct: 234 SGEEDKLKAAVATVGPVSVAIDASHESFQFYSKGVYYEPSCDSDDLDHGVLVVGYGSDNG 293

Query: 288 GPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
             YWL+KNSW ++WG+ G+I+M R+      CG+A  ASYP+ 
Sbjct: 294 KDYWLVKNSWSEHWGDEGYIKMARNRKNH--CGVASAASYPLV 334


>gi|219884655|gb|ACL52702.1| unknown [Zea mays]
 gi|413916718|gb|AFW56650.1| thiol protease SEN102 [Zea mays]
          Length = 349

 Score =  243 bits (621), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 142/334 (42%), Positives = 205/334 (61%), Gaps = 25/334 (7%)

Query: 16  TLHEDSISAKH-------ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTY 68
           T+  D I   H       + W A+  RTY    E   RF ++ +N +FIE  N+ G+ +Y
Sbjct: 20  TVFSDDIVPIHIPLLDRFQAWQAEYNRTYATPEEFQQRFMVYSENVKFIETMNQPGS-SY 78

Query: 69  KLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYA-----NNWFGYP--DSRRGLPRS 121
           +L  N+FADLT+EEF  +   Y M   N+++  ++ A      N  G     +    P S
Sbjct: 79  ELGENQFADLTEEEFKDT---YLMKLDNVASSPEAMALTVDTMNRAGTSGGSNTNEAPNS 135

Query: 122 IDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRG 178
           +DWR +GAVTPVK+Q  CG CW F+AVA++EG+ KI+TGRL+SLSEQ+++DC     + G
Sbjct: 136 VDWRTKGAVTPVKSQQHCGSCWAFAAVASIEGVHKIKTGRLVSLSEQEIVDCDRGGNNHG 195

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELAL 237
           C+GG    A  ++ R+ GLT E  YPY  R+G C   +    AA+IR  Q V   +E AL
Sbjct: 196 CHGGHSSSAMEWVTRNGGLTTESDYPYVGRQGQCMSDKLGHHAAKIRGRQAVQGKNEGAL 255

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNS 296
           ++AV+ +PV+V+I+AS   F++Y  G+F+GPC    NHAVT+VGYG++  G  YW++KNS
Sbjct: 256 QHAVAGRPVAVSINASR-AFQFYKRGIFSGPCNTTRNHAVTVVGYGANASGHKYWIVKNS 314

Query: 297 WGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPI 329
           WG+ WGE G++RM+R V    G+CGIA    Y +
Sbjct: 315 WGERWGEKGYVRMQRGVRAREGVCGIAIAPFYAV 348


>gi|351694420|gb|EHA97338.1| Cathepsin K [Heterocephalus glaber]
          Length = 329

 Score =  243 bits (621), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 134/336 (39%), Positives = 203/336 (60%), Gaps = 20/336 (5%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           + ++++   SL +     E+ +  + ELW     + Y  + ++  R  I++KN ++I   
Sbjct: 4   LKVLLLPMVSLAL---YPEEILDTQWELWKKTYQKQYNGKVDELSRRLIWEKNLKYISIH 60

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N E   G  TY+LS+N   D+T+EE +   TG K+P       + S++N+    PD    
Sbjct: 61  NLEASLGVHTYELSMNHLGDMTNEEVVQKMTGLKVPP------AHSHSNDTLYIPDWEGR 114

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGS 176
            P S+D+R +G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S +
Sbjct: 115 APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEN 174

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SEL 235
            GC GG+M +AF Y+ +++G+  E  YPY  ++  C +     KAA+ R Y++VP  +E 
Sbjct: 175 DGCGGGYMTNAFQYVQQNRGIDSEDAYPYVGQDESCMYNPTG-KAAKCRGYREVPVGNEK 233

Query: 236 ALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGPC--GNNLNHAVTIVGYGSSNEGPYWL 292
           AL+ AV+R  P+SVAIDAS   F++YS GV+      G+NLNHAV  VGYG      +W+
Sbjct: 234 ALKRAVARVGPISVAIDASLTSFQFYSKGVYYDESCDGDNLNHAVLAVGYGIQRGHKHWI 293

Query: 293 IKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           +KNSWG+NWG  G++ + R+      CGIA  AS+P
Sbjct: 294 LKNSWGENWGNKGYVLLARNKNNT--CGIANLASFP 327


>gi|22661|emb|CAA49504.1| papaya proteinase omega [Carica papaya]
          Length = 367

 Score =  243 bits (621), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 132/304 (43%), Positives = 190/304 (62%), Gaps = 11/304 (3%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           WM    + Y+N  EK  RF+IFK N  +I++ N++ N +Y+L LNEFADL+++EF   + 
Sbjct: 51  WMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKK-NNSYRLGLNEFADLSNDEFNEKYV 109

Query: 89  GYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAV 148
           G  +     +   QSY   +    +    LP ++DWR +GAVTPV++QGSCG CW FSAV
Sbjct: 110 GSLID----ATIEQSYDEEFIN--EDIVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAV 163

Query: 149 AAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQR 207
           A VEGI KIRTG+L+ LSEQ+++DC   S GC GG+   A  Y+ ++ G+     YPY+ 
Sbjct: 164 ATVEGINKIRTGKLVELSEQELVDCERRSHGCKGGYPPYALEYVAKN-GIHLRSKYPYKA 222

Query: 208 REGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFA 266
           ++G C  ++      +      V P +E  L  A+++QPVSV +++    F+ Y GG+F 
Sbjct: 223 KQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFE 282

Query: 267 GPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKA 325
           GPCG  ++HAVT VGYG S    Y LIKNSWG  WGE G+IR++R  G + G+CG+ + +
Sbjct: 283 GPCGTKVDHAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSS 342

Query: 326 SYPI 329
            YPI
Sbjct: 343 YYPI 346


>gi|242048430|ref|XP_002461961.1| hypothetical protein SORBIDRAFT_02g011230 [Sorghum bicolor]
 gi|241925338|gb|EER98482.1| hypothetical protein SORBIDRAFT_02g011230 [Sorghum bicolor]
          Length = 380

 Score =  243 bits (620), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 144/346 (41%), Positives = 199/346 (57%), Gaps = 24/346 (6%)

Query: 8   WASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQ- 66
           +A  + S T     +  + + W A   ++Y   AE   RF ++ +N  +IE  N E    
Sbjct: 34  YAGDMGSSTDDNSPMIERFQRWKAAYNKSYATVAEDRRRFLVYARNMAYIEATNAEAEAA 93

Query: 67  --TYKLSLNEFADLTDEEFIASHTGYKMPTRNISN-----------QSQSYANNWFG--- 110
             TY+L    + DLT++EF+A +T    P +  ++            +++   +  G   
Sbjct: 94  GLTYELGETAYTDLTNQEFMAMYTAAPSPAQLPADEDEDDAAEAVITTRAGPVDAVGQLP 153

Query: 111 -YPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQ 169
            Y +     P S+DWRA GAVTPVKNQG CG CW FS VA VEGI +IRTG+L+SLSEQ+
Sbjct: 154 VYVNLSTAAPASVDWRASGAVTPVKNQGRCGSCWAFSTVAVVEGIYQIRTGKLVSLSEQE 213

Query: 170 VLDCSG-SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQ 228
           ++DC     GC GG    A  +I  + GLT E  YPY      CN  + A  AA I   +
Sbjct: 214 LVDCDTLDAGCDGGISYRALRWITSNGGLTTEEDYPYTGTTDACNRAKLAHNAASIAGLR 273

Query: 229 DVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNE 287
            V T SE +L  AV+ QPV+V+I+A    F++Y  GV+ GPCG +LNH VT+VGYG   E
Sbjct: 274 RVATRSEASLANAVAGQPVAVSIEAGGDNFQHYKRGVYNGPCGTSLNHGVTVVGYGQEEE 333

Query: 288 --GPYWLIKNSWGQNWGEGGFIRMRRDVGG--AGLCGIARKASYPI 329
               YW+IKNSWG +WG+GG+I+MR+DV G   GLCGIA + S+P+
Sbjct: 334 DGDKYWIIKNSWGASWGDGGYIKMRKDVAGKPEGLCGIAIRPSFPL 379


>gi|350583407|ref|XP_003481511.1| PREDICTED: cathepsin S [Sus scrofa]
          Length = 331

 Score =  243 bits (620), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 140/340 (41%), Positives = 197/340 (57%), Gaps = 31/340 (9%)

Query: 6   VTWASLVMSRT---LHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           + W  L+ S     LH D    +H +LW     + YK + E+  R  I++KN + +   N
Sbjct: 4   LVWVLLLCSSAMAQLHRDPTLDRHWDLWKKTYGKQYKEKNEEVARRLIWEKNLKTVMLHN 63

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPDSR 115
            E   G  +Y L +N   D+T EE I+  +  ++P+   RN++ +S          P+ +
Sbjct: 64  LEHSMGMHSYDLGMNHLGDMTSEEVISLMSCVRVPSQWPRNVTYKSN---------PNQK 114

Query: 116 RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG 175
             LP S+DWR +G VT VK QGSCG CW FSAV A+E   K++TGRL+SLS Q ++DCS 
Sbjct: 115 --LPDSMDWREKGCVTEVKYQGSCGSCWAFSAVGALEAQVKMKTGRLVSLSAQNLVDCST 172

Query: 176 ----SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP 231
               ++GC GG+M +AF YII + G+  E  YPY+  +G C +     +AA    Y ++P
Sbjct: 173 EKYRNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAVDGKCKYD-SKNRAATCSRYTELP 231

Query: 232 -TSELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEG 288
              E AL+ AV+ + PVSVAIDA    F +Y  GV+  P C  N+NH V +VGYG+ N  
Sbjct: 232 FADEYALKEAVANKGPVSVAIDAKHSSFFFYRSGVYYDPSCTQNVNHGVLVVGYGNLNGK 291

Query: 289 PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
            YWL+KNSWG N+G+GG+IRM R+      CGIA   SYP
Sbjct: 292 DYWLVKNSWGLNFGDGGYIRMARN--SENHCGIANYPSYP 329


>gi|157093357|gb|ABV22333.1| cysteine protease 1 [Noctiluca scintillans]
          Length = 338

 Score =  243 bits (620), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 136/300 (45%), Positives = 173/300 (57%), Gaps = 13/300 (4%)

Query: 35  RTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPT 94
           + Y    E A+RF IFK N   I   N   N T+ L +NEF DLT EEF AS+TG K P 
Sbjct: 36  KVYNGINEDAVRFGIFKANVDIIYATNAR-NLTFALGVNEFTDLTQEEFAASYTGLK-PA 93

Query: 95  RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGI 154
              S   +   + + G P     L  S+DW  +G VTPVKNQG CG CW FS   A+EG 
Sbjct: 94  SLWSGLPRLSTHEYNGAP-----LASSVDWTTQGVVTPVKNQGQCGSCWSFSTTGALEGA 148

Query: 155 TKIRTGRLISLSEQQVLDCSGS-RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCN 213
             + TG L+SLSEQQ  DC  +  GC GGWMD+AFS+  +   +  E  YPY   +G CN
Sbjct: 149 WALSTGNLVSLSEQQFEDCDTTDSGCNGGWMDNAFSFA-KKNSICTEGSYPYTATDGTCN 207

Query: 214 WQ--RGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCG 270
               +  +    +  Y DV T SE A+  AV++QPVS+AI+A    F+ YS GV    CG
Sbjct: 208 LSGCQVGIPQGGVVGYTDVSTDSEQAMMSAVAQQPVSIAIEADQYSFQLYSSGVLTASCG 267

Query: 271 NNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCG-IARKASYPI 329
             L+H V  VGYGS     YW +KNSWG +WGE G++R++R  GGAG CG +A   SYP+
Sbjct: 268 TRLDHGVLAVGYGSEAGTDYWKVKNSWGSSWGEQGYVRLQRGKGGAGECGLLAGPPSYPV 327


>gi|194352758|emb|CAQ00107.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
          Length = 457

 Score =  243 bits (620), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 133/315 (42%), Positives = 188/315 (59%), Gaps = 15/315 (4%)

Query: 24  AKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNR------EGNQTYKLSLNEFAD 77
           A+ E W A+  + Y    E+A R   F +N  F+   N        G  +Y L+LN FAD
Sbjct: 37  AQFEAWCAEHGKAYATPGERAARLAAFAENAAFVAAHNDAVASSGPGGPSYTLALNAFAD 96

Query: 78  LTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG-LPRSIDWRARGAVTPVKNQ 136
           LT +EF A+  G ++        + S ++  F   + R G +P ++DWR  GAVT VK+Q
Sbjct: 97  LTHDEFRAARLG-RLAVGPGPLGAPSPSDGGF---EGRVGAVPDALDWRQSGAVTKVKDQ 152

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRS 194
           GSCG CW FSA  A+EGI KI TG L+SLSEQ+++DC  S   GC GG M  A+ ++I++
Sbjct: 153 GSCGACWSFSATGAMEGINKITTGSLLSLSEQELIDCDRSYNTGCGGGLMTYAYKFVIKN 212

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDAS 253
            G+  E  YP++  +G CN  +       I  Y++VP+S E  L  AV++QP+SV I  S
Sbjct: 213 GGIDTEDDYPFREADGTCNKNKLKKHVVTIDGYKEVPSSKEDLLLQAVAQQPISVGICGS 272

Query: 254 SPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV 313
           +  F+ YS G+F GPC  +L+HAV IVGYGS     YW++KNSWG+ WG  G++ M R+ 
Sbjct: 273 ARAFQLYSQGIFDGPCPTSLDHAVLIVGYGSEGGKDYWIVKNSWGERWGMKGYMHMHRNT 332

Query: 314 G-GAGLCGIARKASY 327
           G  +G+CGI   AS+
Sbjct: 333 GSSSGICGINMMASF 347


>gi|157093355|gb|ABV22332.1| cysteine protease 1 [Noctiluca scintillans]
          Length = 338

 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/300 (45%), Positives = 173/300 (57%), Gaps = 13/300 (4%)

Query: 35  RTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPT 94
           + Y    E A+RF IFK N   I   N   N T+ L +NEF DLT EE  AS+TG K P 
Sbjct: 36  KVYNGINEDAVRFGIFKANVDIIYATNAR-NLTFALGVNEFTDLTQEELAASYTGLK-PA 93

Query: 95  RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGI 154
              S   +   + + G P     L  S+DW  +G VTPVKNQG CG CW FS   A+EG 
Sbjct: 94  SLWSGLPRLSTHEYNGAP-----LASSVDWTTQGVVTPVKNQGQCGSCWSFSTTGALEGA 148

Query: 155 TKIRTGRLISLSEQQVLDCSGS-RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCN 213
             + TG L+SLSEQQ +DC  +  GC GGWMD+AFS+  +   +  E  YPY   +G CN
Sbjct: 149 WALSTGNLVSLSEQQFVDCDTTDSGCNGGWMDNAFSFA-KKNSICTEGSYPYTATDGTCN 207

Query: 214 WQ--RGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCG 270
               +  +    +  Y DV T SE A+  AV++QPVS+AI+A    F+ YS GV    CG
Sbjct: 208 LSGCQVGIPQGGVVGYTDVSTDSEQAMMSAVAQQPVSIAIEADQYSFQLYSSGVLTASCG 267

Query: 271 NNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCG-IARKASYPI 329
             L+H V  VGYGS     YW +KNSWG +WGE G++R++R  GGAG CG +A   SYP+
Sbjct: 268 TRLDHGVLAVGYGSEAGTDYWKVKNSWGSSWGEQGYVRLQRGKGGAGECGLLAGPPSYPV 327


>gi|114559418|ref|XP_001171268.1| PREDICTED: cathepsin S isoform 3 [Pan troglodytes]
 gi|397492866|ref|XP_003817341.1| PREDICTED: cathepsin S isoform 1 [Pan paniscus]
 gi|410225070|gb|JAA09754.1| cathepsin S [Pan troglodytes]
 gi|410251608|gb|JAA13771.1| cathepsin S [Pan troglodytes]
 gi|410328325|gb|JAA33109.1| cathepsin S [Pan troglodytes]
 gi|410328327|gb|JAA33110.1| cathepsin S [Pan troglodytes]
          Length = 331

 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 137/342 (40%), Positives = 198/342 (57%), Gaps = 30/342 (8%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           ++ +++  +S V    LH+D     H  LW     + YK + E+A+R  I++KN +F+  
Sbjct: 4   LVCVLLVCSSAVAQ--LHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVML 61

Query: 60  FNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPD 113
            N E   G  +Y L +N   D+T EE ++  +  ++P+   RNI+ +S           +
Sbjct: 62  HNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRNITYKS-----------N 110

Query: 114 SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
             + LP S+DWR +G VT VK QGSCG CW FSAV A+E   K++TG+L+SLS Q ++DC
Sbjct: 111 PNQILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDC 170

Query: 174 S----GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQD 229
           S    G++GC GG+M  AF YII ++G+  +  YPY+  +  C +     +AA    Y +
Sbjct: 171 STEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKATDQKCQYD-SKYRAATCSKYTE 229

Query: 230 VPTS-ELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSN 286
           +P   E  L+ AV+ + PVSV +DA  P F  Y  GV+  P C  N+NH V +VGYG  N
Sbjct: 230 LPYGREDVLKEAVANKGPVSVGVDALHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLN 289

Query: 287 EGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
              YWL+KNSWG N+GE G+IRM R+ G    CGIA   SYP
Sbjct: 290 GKEYWLVKNSWGHNFGEEGYIRMARNKGNH--CGIASFPSYP 329


>gi|355763133|gb|EHH62119.1| hypothetical protein EGM_20318 [Macaca fascicularis]
          Length = 331

 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 137/342 (40%), Positives = 199/342 (58%), Gaps = 30/342 (8%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           ++ +++  +S V    LH+D     H  LW     + YK + E+A+R  I++KN +F+  
Sbjct: 4   LICVLLVCSSAVAQ--LHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVML 61

Query: 60  FNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPD 113
            N E   G  +Y L +N   D+T EE ++  +  ++P+   RNI+ +S           +
Sbjct: 62  HNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRNITYKS-----------N 110

Query: 114 SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
           + + LP S+DWR +G VT VK QGSCG CW FSAV A+E   K++TG+L+SLS Q ++DC
Sbjct: 111 ANQILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDC 170

Query: 174 S----GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQD 229
           S    G++GC GG+M  AF YII + G+  +  YPY+  +  C +     +AA    Y +
Sbjct: 171 STEKYGNKGCNGGFMTRAFQYIIDNNGIDSDASYPYKATDQKCQYD-SKYRAATCSKYTE 229

Query: 230 VPTS-ELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSN 286
           +P   E  L+  V+ + PVSV +DAS P F  Y  GV+  P C  N+NH V +VGYG  N
Sbjct: 230 LPYGREDVLKEVVANKGPVSVGVDASHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGVLN 289

Query: 287 EGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
              YWL+KNSWG+N+GE G+IRM R+ G    CGIA   SYP
Sbjct: 290 GKEYWLVKNSWGRNFGEEGYIRMARNKGNH--CGIASFPSYP 329


>gi|55740402|gb|AAV63977.1| cathepsin L precursor [Artemia franciscana]
          Length = 338

 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/343 (39%), Positives = 203/343 (59%), Gaps = 24/343 (6%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           LI ++    + +S  L   ++ A    L+ A   + Y +Q E+  R KI+ +N   + K 
Sbjct: 6   LIFLLGAVLVQLSAALSLTNLLADEWHLFKATHKKEYPSQLEEKFRMKIYLENKHKVAKH 65

Query: 61  N---REGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N    +G ++Y++++N+F DL   EF +   GY+   +N S    ++    F  P +   
Sbjct: 66  NILYEKGEKSYQVAMNKFGDLLHHEFRSIMNGYQHKKQNSSRAESTFT---FMEP-ANVE 121

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           +P S+DWR +GA+TPVK+QG CG CW FS+  A+EG T  +TG+LISLSEQ ++DCS   
Sbjct: 122 VPESVDWREKGAITPVKDQGQCGSCWAFSSTGALEGQTFRKTGKLISLSEQNLIDCSGKY 181

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNW---QRGAMKAARIRSYQDVP 231
           G+ GC GG MD AF YI  ++G+  E  YPY+  +  C +    RGA+     R + D+P
Sbjct: 182 GNEGCNGGLMDQAFQYIKDNKGIDTENTYPYEAEDDVCRYNPRNRGAVD----RGFVDIP 237

Query: 232 T-SELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGPC--GNNLNHAVTIVGYGSSNE 287
           +  E  L+ AV+   PVSVAIDAS   F++YS GV+  P    ++L+H V +VGYGS N 
Sbjct: 238 SGEEDKLKAAVATVGPVSVAIDASHESFQFYSKGVYYEPSCDSDDLDHGVLVVGYGSDNG 297

Query: 288 GPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
             YWL+KNSW ++WG+ G+I++ R+      CG+A  ASYP+ 
Sbjct: 298 KDYWLVKNSWSEHWGDEGYIKIARNRKNH--CGVATAASYPLV 338


>gi|62510453|sp|Q8HY82.1|CATS_SAIBB RecName: Full=Cathepsin S; Flags: Precursor
 gi|27497536|gb|AAO13008.1| cathepsin S preproprotein [Saimiri boliviensis]
          Length = 330

 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 136/341 (39%), Positives = 196/341 (57%), Gaps = 29/341 (8%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           ++ ++   +S V    LH+D     H  LW     + YK + E+A+R  I++KN +F+  
Sbjct: 4   LVCVLFVCSSAVTQ--LHKDPTLDHHWNLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVML 61

Query: 60  FNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPD 113
            N E   G  +Y L +N   D+T EE ++  +  ++P    RNI+ +S           +
Sbjct: 62  HNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPNQWQRNITYKS-----------N 110

Query: 114 SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
             + LP S+DWR +G VT VK QGSCG CW FSAV A+E   K++TG+L+SLS Q ++DC
Sbjct: 111 PNQMLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDC 170

Query: 174 S---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV 230
           S   G++GC GG+M +AF YII ++G+  E  YPY+  +  C +     +AA    Y ++
Sbjct: 171 SEKYGNKGCNGGFMTEAFQYIIDNKGIDSEASYPYKATDQKCQYD-SKYRAATCSKYTEL 229

Query: 231 PTS-ELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNE 287
           P   E  L+ AV+ + PV V +DAS P F  Y  GV+  P C   +NH V ++GYG  N 
Sbjct: 230 PYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPACTQKVNHGVLVIGYGDLNG 289

Query: 288 GPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
             YWL+KNSWG N+GE G+IRM R+ G    CGIA   SYP
Sbjct: 290 KEYWLVKNSWGSNFGEQGYIRMARNKGNH--CGIASYPSYP 328


>gi|283898066|emb|CBI99501.1| cysteine peptidase precursor [Bromelia hieronymi]
          Length = 230

 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 115/213 (53%), Positives = 152/213 (71%), Gaps = 3/213 (1%)

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR 177
           +P+SIDWR  GAVT VKNQG CG CW FSA+A VEGI KI+TG L+SLSEQ+VLDC+ S 
Sbjct: 2   VPQSIDWRDYGAVTSVKNQGRCGSCWSFSAIATVEGIYKIKTGNLVSLSEQEVLDCAVSH 61

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELA 236
           GC GGW+D A+++II + G+T    YPY+  +G C        AA I  Y+ V   +E +
Sbjct: 62  GCKGGWVDKAYNFIISNNGVTSAAYYPYKGYQGTCG-ANSVPNAAYITGYKYVQRNNERS 120

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKN 295
           + YA+S QP++  IDAS   F+YY GGV++GPCG +LNHA+T++GYG  + G  YW++KN
Sbjct: 121 MMYALSNQPIAALIDASGKNFQYYKGGVYSGPCGTSLNHAITVIGYGQDSSGIKYWIVKN 180

Query: 296 SWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           SWG +WGE G+IRM RDV  +G+CGIA    +P
Sbjct: 181 SWGTSWGERGYIRMARDVSSSGICGIAMAPLFP 213


>gi|355558399|gb|EHH15179.1| hypothetical protein EGK_01236 [Macaca mulatta]
 gi|380809986|gb|AFE76868.1| cathepsin S isoform 1 preproprotein [Macaca mulatta]
 gi|383416071|gb|AFH31249.1| cathepsin S isoform 1 preproprotein [Macaca mulatta]
 gi|383416073|gb|AFH31250.1| cathepsin S isoform 1 preproprotein [Macaca mulatta]
 gi|383416075|gb|AFH31251.1| cathepsin S isoform 1 preproprotein [Macaca mulatta]
 gi|383416077|gb|AFH31252.1| cathepsin S isoform 1 preproprotein [Macaca mulatta]
 gi|383416079|gb|AFH31253.1| cathepsin S isoform 1 preproprotein [Macaca mulatta]
          Length = 331

 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 137/342 (40%), Positives = 199/342 (58%), Gaps = 30/342 (8%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           ++ +++  +S V    LH+D     H  LW     + YK + E+A+R  I++KN +F+  
Sbjct: 4   LVCVLLVCSSAVAQ--LHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVML 61

Query: 60  FNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPD 113
            N E   G  +Y L +N   D+T EE ++  +  ++P+   RNI+ +S           +
Sbjct: 62  HNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRNITYKS-----------N 110

Query: 114 SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
           + + LP S+DWR +G VT VK QGSCG CW FSAV A+E   K++TG+L+SLS Q ++DC
Sbjct: 111 ANQILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDC 170

Query: 174 S----GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQD 229
           S    G++GC GG+M  AF YII + G+  +  YPY+  +  C +     +AA    Y +
Sbjct: 171 STEKYGNKGCNGGFMTRAFQYIIDNNGIDSDASYPYKATDQKCQYD-SKYRAATCSKYTE 229

Query: 230 VPTS-ELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSN 286
           +P   E  L+  V+ + PVSV +DAS P F  Y  GV+  P C  N+NH V +VGYG  N
Sbjct: 230 LPYGREDVLKEVVANKGPVSVGVDASHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGVLN 289

Query: 287 EGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
              YWL+KNSWG+N+GE G+IRM R+ G    CGIA   SYP
Sbjct: 290 GKEYWLVKNSWGRNFGEEGYIRMARNKGNH--CGIASFPSYP 329


>gi|149751227|ref|XP_001490649.1| PREDICTED: cathepsin K-like [Equus caballus]
          Length = 329

 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 140/336 (41%), Positives = 201/336 (59%), Gaps = 23/336 (6%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L+ MV++A         E+ +  + ELW     + Y ++ ++  R  I++KN + I   
Sbjct: 7   LLLPMVSFA------LYPEEILDTQWELWKKTYRKQYNSKVDEISRRLIWEKNLKHISIH 60

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N E   G  TY+L++N   D+T EE +   TG K+P       S + +N+    PD    
Sbjct: 61  NLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPP------SHTRSNDTLYIPDWEGR 114

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGS 176
            P SID+R +G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S +
Sbjct: 115 APDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEN 174

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SEL 235
            GC GG+M +AF Y+ +++G+  E  YPY  ++  C +     KAA+ R Y+++P  +E 
Sbjct: 175 DGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESCMYNPTG-KAAKCRGYREIPQGNEK 233

Query: 236 ALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWL 292
           AL+ AV+R  PVSVAIDAS   F++YS GV+     N  NLNHAV  VGYG      +W+
Sbjct: 234 ALKRAVARVGPVSVAIDASLTSFQFYSRGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWI 293

Query: 293 IKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           IKNSWG+NWG  G+I M R+   A  CGIA  AS+P
Sbjct: 294 IKNSWGENWGNKGYILMARNKNNA--CGIANMASFP 327


>gi|403302730|ref|XP_003942006.1| PREDICTED: cathepsin S isoform 1 [Saimiri boliviensis boliviensis]
          Length = 339

 Score =  242 bits (618), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 136/341 (39%), Positives = 196/341 (57%), Gaps = 29/341 (8%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           ++ ++   +S V    LH+D     H  LW     + YK + E+A+R  I++KN +F+  
Sbjct: 13  LVCVLFVCSSAVTQ--LHKDPTLDHHWNLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVML 70

Query: 60  FNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPD 113
            N E   G  +Y L +N   D+T EE ++  +  ++P    RNI+ +S           +
Sbjct: 71  HNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPNQWQRNITYKS-----------N 119

Query: 114 SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
             + LP S+DWR +G VT VK QGSCG CW FSAV A+E   K++TG+L+SLS Q ++DC
Sbjct: 120 PNQMLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDC 179

Query: 174 S---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV 230
           S   G++GC GG+M +AF YII ++G+  E  YPY+  +  C +     +AA    Y ++
Sbjct: 180 SEKYGNKGCNGGFMTEAFQYIIDNKGIDSEASYPYKATDQKCQYD-SKYRAATCSKYTEL 238

Query: 231 PTS-ELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNE 287
           P   E  L+ AV+ + PV V +DAS P F  Y  GV+  P C   +NH V ++GYG  N 
Sbjct: 239 PYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPACTQKVNHGVLVIGYGDLNG 298

Query: 288 GPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
             YWL+KNSWG N+GE G+IRM R+ G    CGIA   SYP
Sbjct: 299 KEYWLVKNSWGSNFGEQGYIRMARNKGNH--CGIASYPSYP 337


>gi|390337642|ref|XP_780653.3| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  242 bits (618), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 137/338 (40%), Positives = 203/338 (60%), Gaps = 17/338 (5%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L +++  A +V S ++           W  +  + Y +  E+A R  I++KN   + K N
Sbjct: 4   LSVLLVAACVVSSLSMSFTDFDEDWNEWKNEHGKRYLSDEEEASRRLIWQKNLDIVIKHN 63

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL 118
            +   G+ TY L +N+F DL +EEF+A  TG++     +S  S++   + F  P++   L
Sbjct: 64  LKYDLGHFTYDLGINQFTDLQNEEFVAMMTGFR-----VSGTSKAAKGSTFLPPNNVGEL 118

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SR 177
           P+++DWR +G VTPVK+QG CG CW FS   +VEG     TG+L+SLSEQ ++DCSG   
Sbjct: 119 PKTVDWRTKGYVTPVKDQGQCGSCWAFSTTGSVEGQHFKATGKLVSLSEQNLVDCSGRDA 178

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GG+MD AF YII + G+  E  YPY+  +G C++++ A   A +  Y DV + SE A
Sbjct: 179 GCDGGFMDRAFQYIIDAGGIDTEASYPYKAVDGKCHFKK-ANVGATVTGYTDVTSGSEKA 237

Query: 237 LRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNN-LNHAVTIVGYGSSNEGP-YWL 292
           L+ AV+   P+SVAIDAS   F++Y  GV+  P C +  L+H V  VGYG+S++G  YW+
Sbjct: 238 LQKAVAHVGPISVAIDASHMSFQHYKSGVYNEPGCDSTVLDHGVLAVGYGTSSDGTDYWI 297

Query: 293 IKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           +KNSW + WG  G++ M R+      CGIA  ASYP+ 
Sbjct: 298 VKNSWAETWGMNGYVWMSRNKDNQ--CGIATNASYPLV 333


>gi|224116884|ref|XP_002317418.1| predicted protein [Populus trichocarpa]
 gi|222860483|gb|EEE98030.1| predicted protein [Populus trichocarpa]
          Length = 503

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 129/325 (39%), Positives = 188/325 (57%), Gaps = 14/325 (4%)

Query: 13  MSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQT----Y 68
            S  + E+SI    + W  +  + Y++ AE   R++ FK+N ++I    + G +T    +
Sbjct: 37  FSELVSEESIIEIFQQWRDRHQKVYEHAAESEKRYRNFKRNLKYI--IEKAGKKTAALGH 94

Query: 69  KLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARG 128
            + LN+FADL++EEF      Y    +   N  +S A +W          P S+DWR +G
Sbjct: 95  SVGLNKFADLSNEEF---KELYLSKVKKPINIKRSTARDWRQRNLQTCDAPSSLDWRKKG 151

Query: 129 AVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-GCYGGWMDDA 187
            VT VK+QG CG CW FS   A+EGI  I TG LISLSEQ+++DC  +  GC GG+MD A
Sbjct: 152 VVTAVKDQGDCGSCWSFSTTGAIEGINAIVTGDLISLSEQELVDCDTTNYGCEGGYMDYA 211

Query: 188 FSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVS 247
           F ++I + G+  E  YPY   +G CN  +  +K   I  Y DV  ++ AL  A  +QP+S
Sbjct: 212 FEWVINNGGIDTEANYPYTGVDGTCNTTKEEIKVVSIDGYTDVDETDSALLCATVQQPIS 271

Query: 248 VAIDASSPGFRYYSGGVFAGPCG---NNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEG 304
           V +D S+  F+ Y+GG++ G C    N+++HAV IVGYGS N   YW++KNSWG  WG  
Sbjct: 272 VGMDGSALDFQLYTGGIYDGDCSDDPNDIDHAVLIVGYGSENGEDYWIVKNSWGTEWGME 331

Query: 305 GFIRMRRDVGGA-GLCGIARKASYP 328
           G+  ++R+     G+C I  +ASYP
Sbjct: 332 GYFYIKRNTDLPYGVCAINAEASYP 356


>gi|310942958|pdb|3P5U|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi)
 gi|310942959|pdb|3P5V|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi)
 gi|310942961|pdb|3P5X|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi)
          Length = 220

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 115/216 (53%), Positives = 152/216 (70%), Gaps = 4/216 (1%)

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---S 174
           LP  +DWR+ GAV  +K+QG CG  W FS +AAVEGI KI TG LISLSEQ+++DC    
Sbjct: 1   LPDYVDWRSSGAVVDIKDQGQCGSXWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQ 60

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TS 233
            +RGC GG+M D F +II + G+  E  YPY   EG CN      K   I +Y++VP  +
Sbjct: 61  NTRGCDGGFMTDGFQFIINNGGINTEANYPYTAEEGQCNLDLQQEKYVSIDTYENVPYNN 120

Query: 234 ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLI 293
           E AL+ AV+ QPVSVA++A+   F++YS G+F GPCG  ++HAVTIVGYG+     YW++
Sbjct: 121 EWALQTAVAYQPVSVALEAAGYNFQHYSSGIFTGPCGTAVDHAVTIVGYGTEGGIDYWIV 180

Query: 294 KNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           KNSWG  WGE G++R++R+VGG G CGIA+KASYP+
Sbjct: 181 KNSWGTTWGEEGYMRIQRNVGGVGQCGIAKKASYPV 216


>gi|348586441|ref|XP_003478977.1| PREDICTED: cathepsin K-like [Cavia porcellus]
          Length = 329

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/326 (41%), Positives = 198/326 (60%), Gaps = 18/326 (5%)

Query: 12  VMSRTLH-EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQT 67
           V+S  L+ E+ +  + ELW     + Y  + ++  R  I++KN ++I   N E   G  T
Sbjct: 11  VVSFALYPEEILDTQWELWKKTYRKQYNGKVDEISRRIIWEKNLKYISIHNLEASLGVHT 70

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           Y+LS+N   D+T EE +   TG K+P       S S++N+    PD     P S+D+R +
Sbjct: 71  YELSMNHLGDMTSEEVVQKMTGLKVPP------SHSHSNDTLYIPDWEGRAPDSVDYRKK 124

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDD 186
           G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + GC GG+M +
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 184

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ- 244
           AF Y+  ++G+  E  YPY  +E  C +     KAA+ R Y+++P  +E AL+ AV+R  
Sbjct: 185 AFQYVQENRGIDSEDAYPYVGQEESCMYNPTG-KAAKCRGYREIPVGNEKALKRAVARVG 243

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPC--GNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
           PVSVAIDAS   F++YS GV+      G +LNHA+  VGYG      +W++KNSWG+NWG
Sbjct: 244 PVSVAIDASLSSFQFYSKGVYYDESCNGEDLNHALLAVGYGMQRGNKHWILKNSWGENWG 303

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYP 328
             G++ + R+   A  CGIA  AS+P
Sbjct: 304 NKGYVLLARNKNNA--CGIANLASFP 327


>gi|255635645|gb|ACU18172.1| unknown [Glycine max]
          Length = 355

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 137/317 (43%), Positives = 188/317 (59%), Gaps = 17/317 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           +D + +  E W+ +  + Y    EK  RF+IFK N RFI++ N   N+TYKL LN FADL
Sbjct: 38  DDEVMSMFEEWLVKHDKVYNALGEKEKRFQIFKNNLRFIDERNSL-NRTYKLGLNVFADL 96

Query: 79  TDEEFIASH--TGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQ 136
           T+ E+ A +  T    P  ++    +   N +   P     +P+S+DWR  GAVTPVKNQ
Sbjct: 97  TNAEYRAMYLRTWDDGPRLDLDTPPR---NRYV--PRVGDTIPKSVDWRKEGAVTPVKNQ 151

Query: 137 G-SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIR 193
           G +C  CW F+AV AVE + KI+TG LISLSEQ+V+DC  S SRGC GG +   + YI R
Sbjct: 152 GATCNSCWAFTAVGAVESLVKIKTGDLISLSEQEVVDCTTSSSRGCGGGDIQHGYIYI-R 210

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDA 252
             G++ E+ YPY+  EG C+  +       I  +  VPT  E AL+  ++ QPV+V I A
Sbjct: 211 KNGISLEKDYPYRGDEGKCDSNK-KNAIVTIDGHGWVPTQLEEALKQGIANQPVAVPIPA 269

Query: 253 SSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRD 312
               F+YY+ GVF G CG  LNHA+ +VGYG+  +G YW+ KNS+   WGE G+IR++R 
Sbjct: 270 DDYEFQYYTSGVFKGKCGTELNHALLLVGYGAEKDGDYWIAKNSYSDKWGENGYIRIQRK 329

Query: 313 VGGAGLCGIARKASYPI 329
           +     C       YPI
Sbjct: 330 L---STCKFGNGGYYPI 343


>gi|302845628|ref|XP_002954352.1| hypothetical protein VOLCADRAFT_76255 [Volvox carteri f.
           nagariensis]
 gi|300260282|gb|EFJ44502.1| hypothetical protein VOLCADRAFT_76255 [Volvox carteri f.
           nagariensis]
          Length = 489

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 137/315 (43%), Positives = 182/315 (57%), Gaps = 17/315 (5%)

Query: 24  AKHELWMAQSARTYKNQ-AEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEE 82
           A  + WM Q  + Y N   E   RF ++ +N  +I  +N     ++ L LN FADLT +E
Sbjct: 43  AAFQQWMMQYTKAYANDIKELETRFSVWLENLNYILAYNAR-TTSHWLHLNAFADLTTDE 101

Query: 83  FIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRARGAVTPVKNQGSCGC 141
           F  +  GY    R  SN+ QS     F Y +     LP  IDWR +GAVT VKNQG CG 
Sbjct: 102 F-RNRLGYDFKARQASNRLQSSP---FIYDNVDANQLPTEIDWRKKGAVTEVKNQGQCGS 157

Query: 142 CWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSYIIRSQGLTD 199
           CW F+   +VEGI  I TG L SLSEQ+++DC     RGC GG MD A+ +II++ GL  
Sbjct: 158 CWAFATTGSVEGINAIVTGELASLSEQELVDCDTDEDRGCSGGLMDYAYQWIIKNGGLDT 217

Query: 200 ERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFR 258
           E  YPY   +G C   +   +   I  Y D+P   E+AL+ A + QP++VAI+A +  F+
Sbjct: 218 EDDYPYTAEDGVCVAAKKNRRVVTIDGYVDIPENDEVALKKAAAHQPIAVAIEADAKSFQ 277

Query: 259 YYSGGVFAGP-CGNNLNHAVTIVGYGSSNE-GPYWLIKNSWGQNWGEGGFIRMR---RDV 313
            Y GGV+  P CG +LNH V +VGYG     G YW++KNSWG  WG+ G+IR+R    DV
Sbjct: 278 LYGGGVYDDPTCGTSLNHGVLVVGYGKDPHFGNYWIVKNSWGPEWGDNGYIRLRMGAEDV 337

Query: 314 GGAGLCGIARKASYP 328
              G+CGIA   S+P
Sbjct: 338 --QGMCGIAMAPSFP 350


>gi|426216524|ref|XP_004002512.1| PREDICTED: cathepsin S isoform 1 [Ovis aries]
          Length = 331

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/338 (41%), Positives = 198/338 (58%), Gaps = 31/338 (9%)

Query: 8   WASLVMSRTL---HEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE 63
           WA L+ S  +   H D     H +LW     + Y+ + E+  R  I++KN + +   N E
Sbjct: 6   WALLLCSSAMAQVHRDPTLDHHWDLWKKTYGKQYEEKNEEVARRLIWEKNLKTVMLHNLE 65

Query: 64  ---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPDSRRG 117
              G  +Y+L +N   D+T EE I+S +  ++P+   RN++ +S          P+ +  
Sbjct: 66  HSMGMHSYELGMNHLGDMTSEEVISSMSSLRVPSQWPRNVTYKSS---------PNQK-- 114

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           LP S+DWR +G VT VK QG+CG CW FSAV A+E   K++TG+L+SLS Q ++DCS   
Sbjct: 115 LPDSLDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTVK 174

Query: 175 -GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-T 232
            G++GC GG+M +AF YII + G+  E  YPY+  +G C +     +AA    Y ++P  
Sbjct: 175 YGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDGRCQYDV-KNRAATCSRYIELPFG 233

Query: 233 SELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPY 290
           SE AL+ AV+ + PVSV IDA    F  Y  GV+  P C  N+NH V +VGYGS N   Y
Sbjct: 234 SEEALKEAVANKGPVSVGIDAKQTSFFLYKTGVYYDPSCTQNVNHGVLVVGYGSLNGKDY 293

Query: 291 WLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           WL+KNSWG N+G+ G+IRM R+ G    CGIA   SYP
Sbjct: 294 WLVKNSWGLNFGDQGYIRMARNSGNH--CGIANFPSYP 329


>gi|402856105|ref|XP_003892640.1| PREDICTED: cathepsin S isoform 1 [Papio anubis]
          Length = 331

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 137/342 (40%), Positives = 198/342 (57%), Gaps = 30/342 (8%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           ++ +++  +S V    LH+D     H  LW     + YK + E+A+R  I++KN +F+  
Sbjct: 4   LVCVLLVCSSAVAQ--LHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVML 61

Query: 60  FNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPD 113
            N E   G  +Y L +N   D+T EE ++  +  ++P+   RNI+ +S           +
Sbjct: 62  HNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRNITYKS-----------N 110

Query: 114 SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
             + LP S+DWR +G VT VK QGSCG CW FSAV A+E   K++TG+L+SLS Q ++DC
Sbjct: 111 PNQMLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDC 170

Query: 174 S----GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQD 229
           S    G++GC GG+M  AF YII + G+  +  YPY+  +  C +     +AA    Y +
Sbjct: 171 STEKYGNKGCNGGFMTRAFQYIIDNNGIDSDASYPYKATDQKCQYD-SKYRAATCSKYTE 229

Query: 230 VPTS-ELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSN 286
           +P   E  L+  V+ + PVSV +DAS P F  Y  GV+  P C  N+NH V +VGYG  N
Sbjct: 230 LPYGREDVLKEVVANKGPVSVGVDASHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGVLN 289

Query: 287 EGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
              YWL+KNSWG+N+GE G+IRM R+ G    CGIA   SYP
Sbjct: 290 GKEYWLVKNSWGRNFGEEGYIRMARNKGNH--CGIASFPSYP 329


>gi|77404197|ref|NP_001029168.1| cathepsin K precursor [Canis lupus familiaris]
 gi|122056102|sp|Q3ZKN1.1|CATK_CANFA RecName: Full=Cathepsin K; Flags: Precursor
 gi|58047562|gb|AAW65150.1| cathepsin K [Canis lupus familiaris]
          Length = 330

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/335 (40%), Positives = 201/335 (60%), Gaps = 20/335 (5%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           +++++  AS  +     E+ +  + +LW     + Y ++ ++  R  I++KN + I   N
Sbjct: 6   VLLLLPMASFAL---YPEEILDTQWDLWKKTYRKQYNSKVDELSRRLIWEKNLKHISIHN 62

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL 118
            E   G  TY+L++N   D+T EE +   TG K+P       S S +N+    PD     
Sbjct: 63  LEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPP------SHSRSNDTLYIPDWESRA 116

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSR 177
           P S+D+R +G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + 
Sbjct: 117 PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND 176

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GG+M +AF Y+ +++G+  E  YPY  ++  C +     KAA+ R Y+++P  +E A
Sbjct: 177 GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESCMYNPTG-KAAKCRGYREIPEGNEKA 235

Query: 237 LRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWLI 293
           L+ AV+R  P+SVAIDAS   F++YS GV+     N  NLNHAV  VGYG      +W+I
Sbjct: 236 LKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWII 295

Query: 294 KNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           KNSWG+NWG  G+I M R+   A  CGIA  AS+P
Sbjct: 296 KNSWGENWGNKGYILMARNKNNA--CGIANLASFP 328


>gi|417409774|gb|JAA51378.1| Putative cathepsin k, partial [Desmodus rotundus]
          Length = 331

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 137/336 (40%), Positives = 200/336 (59%), Gaps = 23/336 (6%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L+ MV++A         E+ +  + E W     + Y ++ ++  R  I++KN + I   
Sbjct: 9   LLLPMVSFAQYP------EEILDTQWEQWKKTYRKQYNSKVDEISRRLIWEKNLKHISIH 62

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N E   G  TY+L++N   D+T EE +   TG K+P  +  +    Y  +W G       
Sbjct: 63  NLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSHSRSNDTRYVPDWEG------K 116

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGS 176
           +P SID+R +G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S +
Sbjct: 117 VPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEN 176

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SEL 235
            GC GG+M +AF Y+ ++QG+  E  YPY  ++  C +     KAA+ R Y+++P  +E 
Sbjct: 177 DGCGGGYMTNAFHYVQKNQGIDSEDAYPYVGQDESCMYNPTG-KAAKCRGYKEIPEGNEK 235

Query: 236 ALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWL 292
           AL+ AV+R  P+SVAIDAS   F++YS GV+     N  NLNHAV  VGYG      +W+
Sbjct: 236 ALKRAVARVGPISVAIDASLTSFQFYSKGVYYDKNCNSDNLNHAVLAVGYGIQKRKKHWI 295

Query: 293 IKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           IKNSWG++WG  G+I M R+   A  CGIA  AS+P
Sbjct: 296 IKNSWGESWGNKGYILMARNKNNA--CGIANLASFP 329


>gi|443698586|gb|ELT98517.1| hypothetical protein CAPTEDRAFT_128252 [Capitella teleta]
          Length = 324

 Score =  241 bits (616), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 133/331 (40%), Positives = 201/331 (60%), Gaps = 24/331 (7%)

Query: 9   ASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GN 65
           A+ + S  + ++++     L+    ++TY  +AE   RF I++++   I + N E   G 
Sbjct: 7   AATLASPLVFDEALDEMWTLFKTTHSKTYATEAEDMRRF-IWERHLNMINQHNIEADLGK 65

Query: 66  QTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWR 125
            T+ L +NE+ DLT  E+ A+ +GYKM   ++ +         F  P++ + +P+++DWR
Sbjct: 66  HTFSLGMNEYGDLTQHEY-AAMSGYKMAKSSVGSS--------FLEPENLQ-VPKTVDWR 115

Query: 126 ARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGG 182
            +G VTPVKNQG CG CW FS+  ++EG    +TGRL S+SEQ ++DCS   G+ GC GG
Sbjct: 116 EKGYVTPVKNQGQCGSCWAFSSTGSLEGQVFRKTGRLPSISEQNLVDCSRDEGNMGCSGG 175

Query: 183 WMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAV 241
            MD+AF+YI ++ G+  E+ YPY+  +G C +++ +        + D+P   E ALR AV
Sbjct: 176 LMDNAFTYIKKNMGIDSEKSYPYEAVDGECRYKK-SDSVTTDSGFVDIPHGDETALRTAV 234

Query: 242 -SRQPVSVAIDASSPGFRYYSGGVF--AGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWG 298
            S  PVSVAIDAS   F++Y  GV+  A      L+H V +VGYG  N   YWL+KNSWG
Sbjct: 235 ASVGPVSVAIDASHTSFQFYKTGVYTEANCSSTQLDHGVLVVGYGVENGQDYWLVKNSWG 294

Query: 299 QNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
            +WGE G+I++ R+ G    CGIA +ASYP+
Sbjct: 295 ASWGEAGYIKLARNHGNQ--CGIASQASYPL 323


>gi|281352890|gb|EFB28474.1| hypothetical protein PANDA_008012 [Ailuropoda melanoleuca]
          Length = 328

 Score =  241 bits (616), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 133/314 (42%), Positives = 188/314 (59%), Gaps = 27/314 (8%)

Query: 28  LWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFI 84
           LW     + YK + E+  R  I++KN +F+   N E   G  +Y L +N   D+T EE I
Sbjct: 27  LWKKTYGKQYKEKNEEVARRLIWEKNLKFVTLHNLEHSMGMHSYDLGMNHLGDMTSEEVI 86

Query: 85  ASHTGYKMPT---RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGC 141
           +  +  ++P+   RN++ +S           +S + LP S+DWR +G VT VK QG+CG 
Sbjct: 87  SLMSSLRVPSQWPRNVTYKS-----------NSNQKLPDSVDWREKGCVTKVKYQGACGA 135

Query: 142 CWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS----GSRGCYGGWMDDAFSYIIRSQGL 197
           CW FSAV A+E   K++TG+L+SLS Q ++DCS    G++GC GG+M +AF YII + G+
Sbjct: 136 CWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTEAFQYIIDNNGI 195

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVAIDASSP 255
             E  YPY+  +G C +     +AA    Y ++P+ SE  L+ AV+ + PVSVAIDA   
Sbjct: 196 DSEASYPYKATDGKCRYD-SKNRAATCSKYTELPSGSEDDLKEAVANKGPVSVAIDARHS 254

Query: 256 GFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG 314
            F  Y  GV+  P C  N+NH V +VGYG+ N   YWL+KNSWG N+G+ G+IRM R+ G
Sbjct: 255 SFFLYRSGVYYDPSCTQNVNHGVLVVGYGNLNGKDYWLVKNSWGLNFGDQGYIRMARNSG 314

Query: 315 GAGLCGIARKASYP 328
               CGIA   SYP
Sbjct: 315 NH--CGIASYPSYP 326


>gi|159479072|ref|XP_001697622.1| cysteine endopeptidase [Chlamydomonas reinhardtii]
 gi|158274232|gb|EDP00016.1| cysteine endopeptidase [Chlamydomonas reinhardtii]
          Length = 469

 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 128/311 (41%), Positives = 184/311 (59%), Gaps = 15/311 (4%)

Query: 29  WMAQSARTYKNQ-AEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASH 87
           W    +R+Y N  AE   RFK++ +N  ++  +N     ++ L+LN  ADL+  E+ +  
Sbjct: 16  WAQTHSRSYVNDVAEFENRFKVWLENLEYVLAYNAR-TTSHWLTLNHLADLSTPEYKSKL 74

Query: 88  TGYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFS 146
            G+    R   N+ ++     F Y D     LP +IDWR + AV  VKNQG CG CW F+
Sbjct: 75  LGFDNQARVARNKLKT----GFRYEDVDAEALPPAIDWRKKNAVAEVKNQGQCGSCWAFA 130

Query: 147 AVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSYIIRSQGLTDERVYP 204
              +VEGI  I TG L+SLSEQ+++DC     +GC GG MD A+++II+++G+  E  YP
Sbjct: 131 TTGSVEGINAIVTGSLVSLSEQELVDCDTEQDKGCSGGLMDYAYAWIIKNKGINTEEDYP 190

Query: 205 YQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGG 263
           Y   +G C+  +   +   I SY+DVP   E+AL+ A + QPV+VAI+A +  F+ Y GG
Sbjct: 191 YTAMDGQCDVAKMKRRVVTIDSYEDVPENDEVALKKAAAHQPVAVAIEADAKSFQLYGGG 250

Query: 264 VFAGP-CGNNLNHAVTIVGYGSSNEGP---YWLIKNSWGQNWGEGGFIRMRR-DVGGAGL 318
           V+  P CG +LNH V +VGYG    G    YW++KNSWG  WG+ G+IR++       GL
Sbjct: 251 VYDDPTCGTSLNHGVLVVGYGKDVTGSGSNYWIVKNSWGAEWGDAGYIRLKMGSTDAEGL 310

Query: 319 CGIARKASYPI 329
           CGIA   SYP+
Sbjct: 311 CGIAMAPSYPV 321


>gi|75812934|ref|NP_001028787.1| cathepsin S precursor [Bos taurus]
 gi|115503669|sp|P25326.2|CATS_BOVIN RecName: Full=Cathepsin S; Flags: Precursor
 gi|74353837|gb|AAI02246.1| Cathepsin S [Bos taurus]
 gi|296489535|tpg|DAA31648.1| TPA: cathepsin S precursor [Bos taurus]
          Length = 331

 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 138/340 (40%), Positives = 198/340 (58%), Gaps = 31/340 (9%)

Query: 6   VTWASLVMSRTL---HEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           + WA L+ S  +   H D     H +LW     + YK + E+  R  I++KN + +   N
Sbjct: 4   LVWALLLCSSAMAHVHRDPTLDHHWDLWKKTYGKQYKEKNEEVARRLIWEKNLKTVTLHN 63

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPDSR 115
            E   G  +Y+L +N   D+T EE I+  +  ++P+   RN++ +S           D  
Sbjct: 64  LEHSMGMHSYELGMNHLGDMTSEEVISLMSSLRVPSQWPRNVTYKS-----------DPN 112

Query: 116 RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS- 174
           + LP S+DWR +G VT VK QG+CG CW FSAV A+E   K++TG+L+SLS Q ++DCS 
Sbjct: 113 QKLPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCST 172

Query: 175 ---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP 231
              G++GC GG+M +AF YII + G+  E  YPY+  +G C +     +AA    Y ++P
Sbjct: 173 AKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDGKCQYDV-KNRAATCSRYIELP 231

Query: 232 -TSELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEG 288
             SE AL+ AV+ + PVSV IDAS   F  Y  GV+  P C  N+NH V +VGYG+ +  
Sbjct: 232 FGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQNVNHGVLVVGYGNLDGK 291

Query: 289 PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
            YWL+KNSWG ++G+ G+IRM R+ G    CGIA   SYP
Sbjct: 292 DYWLVKNSWGLHFGDQGYIRMARNSGNH--CGIANYPSYP 329


>gi|346469447|gb|AEO34568.1| hypothetical protein [Amblyomma maculatum]
          Length = 333

 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 132/324 (40%), Positives = 187/324 (57%), Gaps = 38/324 (11%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEFADLTDEEF 83
           E + +   +TYK+  E+ +RFKIF +N  FI K N    +G  +YKL +N+FADL   EF
Sbjct: 28  EAFKSTHKKTYKSNVEELLRFKIFTENSLFIAKHNVKYAKGLVSYKLGINQFADLLPHEF 87

Query: 84  IASHTGYK-----------MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTP 132
           +    GY+           +P  N+++ S                LP+++DWR +GAVTP
Sbjct: 88  VKMMNGYQGKRLAGRGSTYLPPANLNDSS----------------LPKTVDWRKKGAVTP 131

Query: 133 VKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFS 189
           VK+QG CG CW FS+  ++EG   ++TG+L+SLSEQ ++DCS   G++GC GG MD++F+
Sbjct: 132 VKDQGQCGSCWAFSSTGSLEGQHFLKTGKLVSLSEQNLVDCSSAYGNQGCNGGLMDNSFN 191

Query: 190 YIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQ-PVSV 248
           YI  + G+  E  YPY+  +G C +++  + A           SE  L+ AV+   PVSV
Sbjct: 192 YIKANGGIDTEDSYPYEAEDGDCRYKKEDVGATDTGFVDIKEGSEKDLQKAVATVGPVSV 251

Query: 249 AIDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGF 306
           AIDAS   F+ YS GV+  P     +L+H V  VGYG  N   YWL+KNSW + WG+ G+
Sbjct: 252 AIDASQQSFQLYSEGVYDEPNCSSESLDHGVLAVGYGVKNGKKYWLVKNSWAETWGQDGY 311

Query: 307 IRMRRDVGGAGLCGIARKASYPIA 330
           I M RD      CGIA  ASYP+ 
Sbjct: 312 ILMSRDKNNQ--CGIASSASYPLV 333


>gi|296228726|ref|XP_002759933.1| PREDICTED: cathepsin S isoform 1 [Callithrix jacchus]
          Length = 330

 Score =  241 bits (615), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 133/339 (39%), Positives = 197/339 (58%), Gaps = 26/339 (7%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L+ ++   S  +++ L + ++     LW     + YK + E+A+R  I++KN +F+   N
Sbjct: 4   LVCVLFVCSSAVAQLLKDPTLDHHWNLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHN 63

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPDSR 115
            E   G  +Y L +N   D+T EE ++  +  ++P+   RNI+ +S           +  
Sbjct: 64  LEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRNITYKS-----------NPN 112

Query: 116 RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS- 174
           + LP S+DWR +G VT VK QGSCG CW FSAV A+E   K++TG+L+SLS Q ++DCS 
Sbjct: 113 QMLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSE 172

Query: 175 --GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT 232
             G++GC GG+M +AF YII ++G+  E  YPY+  +  C +     +AA    Y ++P 
Sbjct: 173 KYGNKGCNGGFMTEAFQYIIDNKGIDSEASYPYKAMDQKCQYD-SKYRAATCSKYTELPY 231

Query: 233 S-ELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGP 289
             E  L+ AV+ + PV V +DAS   F  Y  GV+  P C  N+NH V ++GYG  N   
Sbjct: 232 GREDVLKEAVANKGPVCVGVDASHSSFFLYRSGVYYDPACTQNVNHGVLVIGYGDLNGEE 291

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           YWL+KNSWG N+GE G+IRM R+ G    CGIA   SYP
Sbjct: 292 YWLVKNSWGSNFGERGYIRMARNKGNH--CGIASYPSYP 328


>gi|5081735|gb|AAD39513.1|AF147207_1 cathepsin L-like protease precursor [Artemia franciscana]
          Length = 338

 Score =  241 bits (615), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 135/343 (39%), Positives = 202/343 (58%), Gaps = 24/343 (6%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           LI ++    + +S  L   ++ A    L+ A   + Y +Q E+  R KI+ +N   + K 
Sbjct: 6   LIFLLGAVLVQLSAALSLTNLLADEWHLFKATHKKEYPSQLEEKFRMKIYLENKHKVAKH 65

Query: 61  N---REGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N    +G ++Y++++N+F DL   EF +   GY+   +N S    ++    F  P +   
Sbjct: 66  NILYEKGEKSYQVAMNKFGDLLHHEFRSIMNGYQHKKQNSSRAESTFT---FMEP-ANVE 121

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           +P S+DWR +GA+TPVK+QG CG CW FS+  A+EG T  +TG+LISLSEQ ++DCS   
Sbjct: 122 VPESVDWRVKGAITPVKDQGQCGSCWAFSSTGALEGQTFRKTGKLISLSEQNLIDCSGKY 181

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNW---QRGAMKAARIRSYQDVP 231
           G+ GC GG MD AF YI  ++G+  E  YPY+  +  C +    RGA+     R +  +P
Sbjct: 182 GNEGCNGGLMDQAFQYIKDNKGIDTENTYPYEAEDNVCRYNPRNRGAID----RGFVHIP 237

Query: 232 T-SELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGPC--GNNLNHAVTIVGYGSSNE 287
           +  E  L+ AV+   PVSVAIDAS   F++YS GV+  P    ++L+H V +VGYGS N 
Sbjct: 238 SGEEDKLKAAVATVGPVSVAIDASHESFQFYSKGVYYEPSCDSDDLDHGVLVVGYGSDNG 297

Query: 288 GPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
             YWL+KNSW ++WG+ G+I++ R+      CGIA  ASYP+ 
Sbjct: 298 KDYWLVKNSWSEHWGDEGYIKIARNRKNH--CGIATAASYPLV 338


>gi|440906716|gb|ELR56945.1| Cathepsin S, partial [Bos grunniens mutus]
          Length = 342

 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 138/340 (40%), Positives = 198/340 (58%), Gaps = 31/340 (9%)

Query: 6   VTWASLVMSRTL---HEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           + WA L+ S  +   H D     H +LW     + YK + E+  R  I++KN + +   N
Sbjct: 15  LVWALLLCSSAMAQVHRDPTLDHHWDLWKKTYGKQYKEKNEEVARRLIWEKNLKTVTLHN 74

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPDSR 115
            E   G  +Y+L +N   D+T EE I+  +  ++P+   RN++ +S           D  
Sbjct: 75  LEHSMGMHSYELGMNHLGDMTSEEVISLMSSLRVPSQWPRNVTYKS-----------DPN 123

Query: 116 RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS- 174
           + LP S+DWR +G VT VK QG+CG CW FSAV A+E   K++TG+L+SLS Q ++DCS 
Sbjct: 124 QKLPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCST 183

Query: 175 ---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP 231
              G++GC GG+M +AF YII + G+  E  YPY+  +G C +     +AA    Y ++P
Sbjct: 184 AKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDGKCQYDV-KNRAATCSRYIELP 242

Query: 232 -TSELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEG 288
             SE AL+ AV+ + PVSV IDAS   F  Y  GV+  P C  N+NH V +VGYG+ +  
Sbjct: 243 FGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQNVNHGVLVVGYGNLDGK 302

Query: 289 PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
            YWL+KNSWG ++G+ G+IRM R+ G    CGIA   SYP
Sbjct: 303 DYWLVKNSWGLHFGDQGYIRMARNSGNH--CGIASYPSYP 340


>gi|301767946|ref|XP_002919405.1| PREDICTED: cathepsin S-like [Ailuropoda melanoleuca]
          Length = 340

 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 133/314 (42%), Positives = 188/314 (59%), Gaps = 27/314 (8%)

Query: 28  LWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFI 84
           LW     + YK + E+  R  I++KN +F+   N E   G  +Y L +N   D+T EE I
Sbjct: 39  LWKKTYGKQYKEKNEEVARRLIWEKNLKFVTLHNLEHSMGMHSYDLGMNHLGDMTSEEVI 98

Query: 85  ASHTGYKMPT---RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGC 141
           +  +  ++P+   RN++ +S           +S + LP S+DWR +G VT VK QG+CG 
Sbjct: 99  SLMSSLRVPSQWPRNVTYKS-----------NSNQKLPDSVDWREKGCVTKVKYQGACGA 147

Query: 142 CWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS----GSRGCYGGWMDDAFSYIIRSQGL 197
           CW FSAV A+E   K++TG+L+SLS Q ++DCS    G++GC GG+M +AF YII + G+
Sbjct: 148 CWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTEAFQYIIDNNGI 207

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVAIDASSP 255
             E  YPY+  +G C +     +AA    Y ++P+ SE  L+ AV+ + PVSVAIDA   
Sbjct: 208 DSEASYPYKATDGKCRYD-SKNRAATCSKYTELPSGSEDDLKEAVANKGPVSVAIDARHS 266

Query: 256 GFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG 314
            F  Y  GV+  P C  N+NH V +VGYG+ N   YWL+KNSWG N+G+ G+IRM R+ G
Sbjct: 267 SFFLYRSGVYYDPSCTQNVNHGVLVVGYGNLNGKDYWLVKNSWGLNFGDQGYIRMARNSG 326

Query: 315 GAGLCGIARKASYP 328
               CGIA   SYP
Sbjct: 327 NH--CGIASYPSYP 338


>gi|242072388|ref|XP_002446130.1| hypothetical protein SORBIDRAFT_06g002130 [Sorghum bicolor]
 gi|241937313|gb|EES10458.1| hypothetical protein SORBIDRAFT_06g002130 [Sorghum bicolor]
          Length = 276

 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 130/285 (45%), Positives = 172/285 (60%), Gaps = 36/285 (12%)

Query: 51  KKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFG 110
           + N  F+E FN   N  + L +N+FADLT EEF A+  G+K PT      ++      F 
Sbjct: 19  RDNVAFVESFNANKNNKFWLGVNQFADLTTEEFKANK-GFK-PT-----SAEKVPTTGFK 71

Query: 111 YPD-SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQ 169
           Y + S   LP ++DWR +GAVTP+KNQG CGCCW FSAVAA+EGI K+ TG LISLS+Q+
Sbjct: 72  YENLSVSALPTAVDWRTKGAVTPIKNQGQCGCCWAFSAVAAMEGIVKLSTGNLISLSKQE 131

Query: 170 VLDC---SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRS 226
           ++DC   S   GC                    E   PY+  +G C  + G+  AA I+ 
Sbjct: 132 LVDCDTHSMDEGC--------------------EVQLPYKAVDGKC--KGGSKSAATIKG 169

Query: 227 YQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSS 285
           ++DVP  +E AL  AV+ QPVSVA+DAS   F  YSGGV  G CG  L+H +  +GYG  
Sbjct: 170 HEDVPVNNEAALMKAVANQPVSVAVDASDRTFMLYSGGVMTGSCGTELDHGIAAIGYGME 229

Query: 286 NEGP-YWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYP 328
           ++G  YW++KNSWG  WGE GF+RM +D+    G+CG+A K SYP
Sbjct: 230 SDGTKYWILKNSWGTTWGEKGFLRMEKDITDKRGMCGLAMKPSYP 274


>gi|404312774|pdb|3TNX|A Chain A, Structure Of The Precursor Of A Thermostable Variant Of
           Papain At 2.6 Angstroem Resolution
 gi|404312775|pdb|3TNX|C Chain C, Structure Of The Precursor Of A Thermostable Variant Of
           Papain At 2.6 Angstroem Resolution
 gi|428698029|pdb|3USV|A Chain A, Structure Of The Precursor Of A Thermostable Variant Of
           Papain At 3.8 A Resolution From A Crystal Soaked At Ph 4
 gi|428698030|pdb|3USV|C Chain C, Structure Of The Precursor Of A Thermostable Variant Of
           Papain At 3.8 A Resolution From A Crystal Soaked At Ph 4
          Length = 363

 Score =  241 bits (614), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 130/306 (42%), Positives = 183/306 (59%), Gaps = 14/306 (4%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           E WM +  + YKN  EK  RF+IFK N ++I++ N++ N +Y L LN FAD++++EF   
Sbjct: 67  ESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKK-NNSYWLGLNVFADMSNDEFKEK 125

Query: 87  HTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFS 146
           +TG        +  S     N     D    +P  +DWR +GAVTPVKNQGSCG  W FS
Sbjct: 126 YTGSIAGNYTTTELSYEEVLN-----DGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFS 180

Query: 147 AVAAVEGITKIRTGRLISLSEQQVLDCS-GSRGCYGGWMDDAFSYIIRSQGLTDERVYPY 205
           AV+ +E I KIRTG L   SEQ++LDC   S GC GG+   A   ++   G+     YPY
Sbjct: 181 AVSTIESIIKIRTGNLNEYSEQELLDCDRRSYGCNGGYPWSALQ-LVAQYGIHYRNTYPY 239

Query: 206 QRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGFRYYSGGV 264
           +  + YC  +     AA+    + V P +E AL Y+++ QPVSV ++A+   F+ Y GG+
Sbjct: 240 EGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGI 299

Query: 265 FAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIAR 323
           F GPCGN ++HAV  VGYG +    Y LI+NSWG  WGE G+IR++R  G + G+CG+  
Sbjct: 300 FVGPCGNKVDHAVAAVGYGPN----YILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYT 355

Query: 324 KASYPI 329
            + YP+
Sbjct: 356 SSFYPV 361


>gi|196002275|ref|XP_002111005.1| expressed hypothetical protein [Trichoplax adhaerens]
 gi|190586956|gb|EDV27009.1| expressed hypothetical protein [Trichoplax adhaerens]
          Length = 325

 Score =  241 bits (614), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 127/310 (40%), Positives = 183/310 (59%), Gaps = 18/310 (5%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           E W +   + Y NQ E   R  +F +N + I   N +   T+K+++NEF+DLT +EF+ +
Sbjct: 26  EAWKSFHGKKYHNQGEDDFRHYVFLQNIKTIAAHNAK--STFKMAINEFSDLTRKEFVKT 83

Query: 87  HTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFS 146
           + GY++  +  +N+  ++             +P  +DWR  G VTP+KNQG CG CW FS
Sbjct: 84  YNGYRLSMKKSTNKPSTFM------APLNTNMPTEVDWRKEGYVTPIKNQGRCGSCWAFS 137

Query: 147 AVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVY 203
              ++EG    +TG+L+SLSEQ ++DCS   G+ GC GG+MDDAF YI  + G+  E  Y
Sbjct: 138 TTGSLEGQHFRKTGKLVSLSEQNLIDCSAAEGNDGCGGGFMDDAFEYIKLNNGIDTEASY 197

Query: 204 PYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVAIDASSPGFRYYS 261
           PY+ R+  C +++   K A    Y D+   SE  L+ AV+   P+SVAIDAS   F  Y 
Sbjct: 198 PYEGRDDICRYKK-TNKGAIDTGYMDIKQYSEDDLKAAVATVGPISVAIDASHKSFHMYH 256

Query: 262 GGVFAGP-CGNN-LNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLC 319
            GV+  P C    L+H V +VGYG+ N   YWL+KNSWG +WG  G+I+M R+   +  C
Sbjct: 257 TGVYHEPECSQTVLDHGVLVVGYGTENGEDYWLVKNSWGTDWGMNGYIKMSRNR--SNNC 314

Query: 320 GIARKASYPI 329
           GIA  ASYP+
Sbjct: 315 GIATNASYPL 324


>gi|297733654|emb|CBI14901.3| unnamed protein product [Vitis vinifera]
          Length = 273

 Score =  240 bits (613), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 122/257 (47%), Positives = 169/257 (65%), Gaps = 7/257 (2%)

Query: 78  LTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQG 137
           +T+ EF +++ G K+    +   SQ +A   F Y +  + +P S+DWR +GAVTP+K+QG
Sbjct: 1   MTNHEFRSTYAGSKVNHHRMFRGSQ-HAAGSFMY-EKVKSVPPSVDWRKKGAVTPIKDQG 58

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQ 195
            CG CW FS V AVEGI  I+T +L+SLSEQ+++DC  S  +GC GG M  AF +I    
Sbjct: 59  QCGSCWAFSTVVAVEGINHIKTNKLVSLSEQELVDCDTSENQGCNGGLMGYAFEFIKEKG 118

Query: 196 GLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASS 254
           G+T E+ YPY   +G C+  +       I  ++ V P +E AL  A + QP+SVAIDA  
Sbjct: 119 GITTEQSYPYTAEDGTCDVSKVNSPVVSIDGHETVPPNNEDALLKAAANQPISVAIDAGG 178

Query: 255 PGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRDV 313
             F++YS GVFAG CG +L+H V IVGYG++ +G  YW++KNSWG +WGE G+IRM+R +
Sbjct: 179 SAFQFYSEGVFAGRCGTDLDHGVAIVGYGTTLDGTKYWIVKNSWGTDWGENGYIRMKRGI 238

Query: 314 GG-AGLCGIARKASYPI 329
               GLCGIA +ASYPI
Sbjct: 239 SAKEGLCGIAVEASYPI 255


>gi|149751225|ref|XP_001490531.1| PREDICTED: cathepsin S-like [Equus caballus]
          Length = 332

 Score =  240 bits (613), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 136/326 (41%), Positives = 190/326 (58%), Gaps = 28/326 (8%)

Query: 17  LHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSL 72
           LH D     H +LW     + YK + E+  R  I+++N +F+   N E   G  +Y L +
Sbjct: 19  LHRDPTLDNHWDLWKKTYGKQYKEKNEEVARRLIWERNLKFVMLHNLEHSMGMHSYDLGM 78

Query: 73  NEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGA 129
           N   D+T EE  +  +  ++P+   RN++ +S          P+ +  LP S+DWR +G 
Sbjct: 79  NHLGDMTSEEVTSLMSSLRVPSQWQRNVTYKSN---------PNEK--LPDSLDWREKGC 127

Query: 130 VTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS----GSRGCYGGWMD 185
           VT VK QGSCG CW FSAV A+E   K++TG L+SLS Q ++DCS     ++GC GG+M 
Sbjct: 128 VTEVKYQGSCGACWAFSAVGALEAQLKLKTGNLVSLSAQNLVDCSTEKYSNKGCNGGFMT 187

Query: 186 DAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQ 244
            AF YII + G+  +  YPY+  +G C +     +AA    Y ++P  SE  L+ AV+ +
Sbjct: 188 AAFQYIIDNNGIDSDASYPYKAMDGKCRYD-SKNRAATCSKYTELPFGSEDDLKEAVANK 246

Query: 245 -PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
            PVSVAIDAS P F  Y  GV+  P C  N+NH V +VGYG+ N   YWL+KNSWG N+G
Sbjct: 247 GPVSVAIDASHPSFFLYKSGVYYDPSCTQNVNHGVLVVGYGNLNGKDYWLVKNSWGINFG 306

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYP 328
           + G+IRM R+ G    CGIA   SYP
Sbjct: 307 DKGYIRMARNSGNH--CGIANYCSYP 330


>gi|444519959|gb|ELV12909.1| Cathepsin L1 [Tupaia chinensis]
          Length = 333

 Score =  240 bits (613), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 134/342 (39%), Positives = 188/342 (54%), Gaps = 26/342 (7%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L + +    +  +   H+ S+  +   W A+  + Y    E+++R  +++KN + IE+ N
Sbjct: 5   LFLTILCLGIASAAPTHDQSLDEQWNQWTAEHGKVYST-GEESLRRAVWEKNLKMIEQHN 63

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL 118
            E   G  T+ + +N F D+T+E+F    TG+         Q+Q Y       P     +
Sbjct: 64  LEYSQGKHTFTMGMNAFGDMTNEDFRQMMTGF---------QNQKYNKGEVFQPPQPLEV 114

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR- 177
           P S+DWR +G VTPVKNQ  CG CW FSA  A+EG    +TG+L+SLSEQ ++DCS  + 
Sbjct: 115 PESVDWREKGYVTPVKNQHRCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSQPQH 174

Query: 178 --GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSEL 235
             GC GG +  AF Y+  + GL  E  YPY+  E  C +  G   AA +  ++ +P  E 
Sbjct: 175 NSGCKGGLVIKAFQYVKDNGGLDSEESYPYEEMESTCRYSPGN-SAATVTGFKHIPAEEK 233

Query: 236 ALRYAV-SRQPVSVAIDASSPGFRYYSGGVFAGP-CGNN-LNHAVTIVGYG----SSNEG 288
           AL  AV S  P+SVAIDA    F++Y+GG+   P C    LNHAV +VGYG     SN  
Sbjct: 234 ALEKAVASVGPISVAIDAHHHSFQFYTGGILHEPNCSPKWLNHAVLVVGYGVMQEGSNNN 293

Query: 289 PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
            YWL+KNSWG+ WG GG+I M +D      CGIA  A YPI 
Sbjct: 294 TYWLVKNSWGERWGVGGYIMMAKDKNNH--CGIASDALYPIV 333


>gi|440906717|gb|ELR56946.1| Cathepsin K [Bos grunniens mutus]
          Length = 338

 Score =  240 bits (613), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 138/326 (42%), Positives = 198/326 (60%), Gaps = 18/326 (5%)

Query: 12  VMSRTLH-EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQT 67
           V+S  L+ E+ +  + ELW     + Y ++ ++  R  I++KN + I   N E   G  T
Sbjct: 20  VVSFALYPEEILDTQWELWKKTYRKQYNSKGDEISRRLIWEKNLKHISIHNLEASLGVHT 79

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           Y+L++N   D+T EE +   TG K+P       S+S +N+    PD     P SID+R +
Sbjct: 80  YELAMNHLGDMTSEEVVQKMTGLKVPA------SRSRSNDTLYIPDWEGRAPDSIDYRKK 133

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDD 186
           G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + GC GG+M +
Sbjct: 134 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 193

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ- 244
           AF Y+ +++G+  E  YPY  ++  C +     KAA+ R Y+++P  +E AL+ AV+R  
Sbjct: 194 AFQYVQKNRGIDSEDAYPYVGQDENCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVG 252

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
           P+SVAIDAS   F++Y  GV+     N  NLNHAV  VGYG      +W+IKNSWG+NWG
Sbjct: 253 PISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 312

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYP 328
             G+I M R+   A  CGIA  AS+P
Sbjct: 313 NKGYILMARNKNNA--CGIANLASFP 336


>gi|357160095|ref|XP_003578656.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP2-like
           [Brachypodium distachyon]
          Length = 377

 Score =  240 bits (612), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 136/332 (40%), Positives = 190/332 (57%), Gaps = 26/332 (7%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE--GNQTYKLSLNEFADL 78
           +++ + + W A+  R Y  + E+  R +++ +N R+IE  N +     TY+L    + DL
Sbjct: 48  TMAPRFQRWKAEHGRAYATRDEELRRLRVYARNVRYIEAANGDPAAGLTYQLGETAYTDL 107

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWF-----GYPD----------SRRGLPRSID 123
           T +EF A +T    P+  +S      A         G  D          S  G P S+D
Sbjct: 108 TADEFTAMYTS---PSPVLSAHDDEAAGAMMITTRAGAVDAGGQQVYFNVSTAGAPASVD 164

Query: 124 WRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGG 182
           WRA+GAVT VKNQG CG CW FS VA VEGI +IRTG LISLSEQ+++DC     GC GG
Sbjct: 165 WRAKGAVTEVKNQGRCGSCWAFSTVAVVEGIHQIRTGNLISLSEQELVDCDTLDYGCDGG 224

Query: 183 WMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAV 241
               A  +I  + G+  E  YPY  ++G C   +  + AA I  +  V T SE +L  AV
Sbjct: 225 VSYHALEWIASNGGIATEADYPYTGKDGACVANKLPLHAAAISGFARVATRSEPSLANAV 284

Query: 242 SRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIV--GYGSSNEGPYWLIKNSWGQ 299
           + QPV+V+I+A    F++Y  GV+ GPCG  LNH VT+V  G    +   YW++KNSWG+
Sbjct: 285 AAQPVAVSIEAGGANFQHYVKGVYNGPCGTRLNHGVTVVGYGEEEGDGEKYWIVKNSWGK 344

Query: 300 NWGEGGFIRMRRDVGG--AGLCGIARKASYPI 329
            WG+GG+ RM++DV G   GLCGIA + S+P+
Sbjct: 345 KWGDGGYFRMKKDVAGKPEGLCGIAIRPSFPL 376


>gi|326430491|gb|EGD76061.1| cathepsin [Salpingoeca sp. ATCC 50818]
          Length = 381

 Score =  240 bits (612), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 127/274 (46%), Positives = 169/274 (61%), Gaps = 20/274 (7%)

Query: 35  RTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIASHTGYK 91
           + Y++  E+A RF IF  N  FI + N E   G  T+ + +N+FADLT+EE+   +    
Sbjct: 29  KQYESPEEEARRFAIFADNLAFIARHNAEAARGLHTHTVGVNQFADLTNEEYRQLYL-RP 87

Query: 92  MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAV 151
            PT  +  + Q     W   P++      S+DWR +GAVTP+KNQG CG CW FS   +V
Sbjct: 88  YPTELLGRERQEV---WLDGPNAG-----SVDWRQKGAVTPIKNQGQCGSCWSFSTTGSV 139

Query: 152 EGITKIRTGRLISLSEQQVLDCSGS---RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRR 208
           EG   I TG L+SLSEQQ++DCSGS   +GC GG MD+AF YII + GL  E+ YPY  R
Sbjct: 140 EGAHAIATGNLVSLSEQQLVDCSGSFGNQGCNGGLMDNAFKYIISNGGLDTEQDYPYTAR 199

Query: 209 EGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAG 267
           +G C+  + +  A  I  Y+DVP  +E  L  AV + PVSVAI+A    F+ YS GVF+G
Sbjct: 200 DGVCDKSKESKHAVSISGYKDVPQNNEDQLAAAVEKGPVSVAIEADQQSFQMYSSGVFSG 259

Query: 268 PCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNW 301
           PCG NL+H V +VGY S     YW++KNSWG +W
Sbjct: 260 PCGTNLDHGVLVVGYTSD----YWIVKNSWGASW 289


>gi|442754503|gb|JAA69411.1| Putative cathepsin l-like cysteine proteinase b [Ixodes ricinus]
          Length = 335

 Score =  240 bits (612), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 126/324 (38%), Positives = 195/324 (60%), Gaps = 18/324 (5%)

Query: 18  HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNE 74
           +++ + A+   + A+  ++Y ++ E+  R KI+ +N   I K N +   G   Y +++NE
Sbjct: 19  YQEVLGAEWSAFKAKHGKSYVSETEEVFRLKIYMENRHKIAKHNEKYARGEVPYSMAMNE 78

Query: 75  FADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRR--GLPRSIDWRARGAVTP 132
           F D+   EF+++  G+K   ++   +  +Y       P++     LP+++DWR +GAVTP
Sbjct: 79  FGDMLHHEFVSTRNGFKRNYKDQPREGSTYLE-----PENIEDFSLPKTVDWRTKGAVTP 133

Query: 133 VKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFS 189
           VKNQG CG CW FSA  ++EG    ++G ++SLSEQ ++DCS   G+ GC GG MD+AF 
Sbjct: 134 VKNQGQCGSCWAFSATGSLEGQHFRKSGSMVSLSEQNLVDCSTDFGNNGCEGGLMDNAFK 193

Query: 190 YIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSR-QPVSV 248
           YI  ++G+  E+ YPY   +G C++++  + A           SE  L+ AV+   P+SV
Sbjct: 194 YIRANKGIDTEKSYPYNGTDGTCHFKKSTVGATDSGFVDIKEGSETQLKKAVATVGPISV 253

Query: 249 AIDASSPGFRYYSGGVFAGP-CGN-NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGF 306
           AIDAS   F++YS GV+  P C + +L+H V +VGYG+ N   YWL+KNSWG  WG+ G+
Sbjct: 254 AIDASHESFQFYSDGVYDEPECDSESLDHGVLVVGYGTLNGTDYWLVKNSWGTTWGDEGY 313

Query: 307 IRMRRDVGGAGLCGIARKASYPIA 330
           IRM R+      CGIA  ASYP+ 
Sbjct: 314 IRMSRN--KKNQCGIASSASYPLV 335


>gi|226503205|ref|NP_001150062.1| thiol protease SEN102 precursor [Zea mays]
 gi|195636390|gb|ACG37663.1| thiol protease SEN102 precursor [Zea mays]
          Length = 349

 Score =  240 bits (612), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 141/334 (42%), Positives = 203/334 (60%), Gaps = 25/334 (7%)

Query: 16  TLHEDSISAKH-------ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTY 68
           T+  D I   H       + W A+  RTY    E   RF ++ +N +FIE  N+ G+ +Y
Sbjct: 20  TVFSDDIVPIHIPLLDRFQAWQAEYNRTYATPEEFQQRFMVYSENVKFIETMNQPGS-SY 78

Query: 69  KLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYA-----NNWFGYP--DSRRGLPRS 121
           +L  N FADLT+EEF  +   Y M   N+++  ++ A      N  G     +    P S
Sbjct: 79  ELGENRFADLTEEEFKDT---YLMKLDNVASSPEAMALTVDTMNRAGTSGGSNTNEAPNS 135

Query: 122 IDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRG 178
           +DWR +GAVTPVK+Q  CG CW F+AVA++EG+ KI+TG L+SLSEQ+++DC     + G
Sbjct: 136 VDWRTKGAVTPVKSQQHCGSCWAFAAVASIEGVHKIKTGLLVSLSEQEIVDCDRGGNNHG 195

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELAL 237
           C+GG    A  ++ R+ GLT E  YPY  R+G C   +    AA+IR  Q V   +E AL
Sbjct: 196 CHGGHSSSAMEWVTRNGGLTTESDYPYVGRQGQCMSDKLGHHAAKIRGRQAVQGKNEGAL 255

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNS 296
           ++AV+ +PV+V+I+AS   F++Y  G+F+GPC    NHAVT+VGYG++  G  YW++KNS
Sbjct: 256 QHAVAGRPVAVSINASR-AFQFYKRGIFSGPCNTTRNHAVTVVGYGANASGHKYWIVKNS 314

Query: 297 WGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPI 329
           WG+ WGE G++RM+R V    G+CGIA    Y +
Sbjct: 315 WGERWGEKGYVRMQRGVRAREGVCGIAIAPFYAV 348


>gi|422001787|dbj|BAM66994.1| germination-specific cysteine protease 1, partial [Raphanus
           sativus]
          Length = 235

 Score =  239 bits (611), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 116/220 (52%), Positives = 151/220 (68%), Gaps = 5/220 (2%)

Query: 115 RRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS 174
           +  LP ++DWR +GAV  +KNQG+CG CW FS  A VEGI KI TG LISLSEQ+++DC 
Sbjct: 1   KEALPETVDWRQKGAVNAIKNQGTCGSCWAFSTAAVVEGINKIVTGELISLSEQELVDCD 60

Query: 175 GS--RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT 232
            S  +GC GG MD AF +I+++ GL  E+ YPY+  +G CN      K   I  Y+DVPT
Sbjct: 61  KSYNQGCNGGLMDYAFQFIMKNGGLNTEQDYPYRGSDGKCNSLLKNSKVVTIDGYEDVPT 120

Query: 233 S-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYW 291
           + E AL+ AVS QPVSVAIDA    F++Y  G+F G CG  ++HAV  VGYGS N   YW
Sbjct: 121 NDETALKRAVSYQPVSVAIDAGGRVFQHYQSGIFTGECGTKMDHAVVAVGYGSENGVDYW 180

Query: 292 LIKNSWGQNWGEGGFIRMRRDVGG--AGLCGIARKASYPI 329
           +++NSWGQ WGE G+IR+ R++    +G CGIA +ASYP+
Sbjct: 181 IVRNSWGQKWGEDGYIRIERNLASSKSGKCGIAIEASYPV 220


>gi|77735825|ref|NP_001029607.1| cathepsin K precursor [Bos taurus]
 gi|59858469|gb|AAX09069.1| cathepsin K preproprotein [Bos taurus]
 gi|83638771|gb|AAI09854.1| Cathepsin K [Bos taurus]
 gi|296489554|tpg|DAA31667.1| TPA: cathepsin K [Bos taurus]
          Length = 334

 Score =  239 bits (611), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 137/326 (42%), Positives = 198/326 (60%), Gaps = 18/326 (5%)

Query: 12  VMSRTLH-EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQT 67
           V+S  L+ E+ +  + ELW     + Y ++ ++  R  I++KN + I   N E   G  T
Sbjct: 16  VVSFALYPEEILDTQWELWKKTYRKQYNSKGDEISRRLIWEKNLKHISIHNLEASLGVHT 75

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           Y+L++N   D+T EE +   TG K+P       S+S +N+    PD     P S+D+R +
Sbjct: 76  YELAMNHLGDMTSEEVVQKMTGLKVPA------SRSRSNDTLYIPDWEGRAPDSVDYRKK 129

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDD 186
           G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + GC GG+M +
Sbjct: 130 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 189

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ- 244
           AF Y+ +++G+  E  YPY  ++  C +     KAA+ R Y+++P  +E AL+ AV+R  
Sbjct: 190 AFQYVQKNRGIDSEDAYPYVGQDENCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVG 248

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
           P+SVAIDAS   F++Y  GV+     N  NLNHAV  VGYG      +W+IKNSWG+NWG
Sbjct: 249 PISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 308

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYP 328
             G+I M R+   A  CGIA  AS+P
Sbjct: 309 NKGYILMARNKNNA--CGIANLASFP 332


>gi|109940312|sp|Q5E968.2|CATK_BOVIN RecName: Full=Cathepsin K; Flags: Precursor
          Length = 329

 Score =  239 bits (611), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 137/326 (42%), Positives = 198/326 (60%), Gaps = 18/326 (5%)

Query: 12  VMSRTLH-EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQT 67
           V+S  L+ E+ +  + ELW     + Y ++ ++  R  I++KN + I   N E   G  T
Sbjct: 11  VVSFALYPEEILDTQWELWKKTYRKQYNSKGDEISRRLIWEKNLKHISIHNLEASLGVHT 70

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           Y+L++N   D+T EE +   TG K+P       S+S +N+    PD     P S+D+R +
Sbjct: 71  YELAMNHLGDMTSEEVVQKMTGLKVPA------SRSRSNDTLYIPDWEGRAPDSVDYRKK 124

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDD 186
           G VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + GC GG+M +
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTN 184

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ- 244
           AF Y+ +++G+  E  YPY  ++  C +     KAA+ R Y+++P  +E AL+ AV+R  
Sbjct: 185 AFQYVQKNRGIDSEDAYPYVGQDENCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVG 243

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
           P+SVAIDAS   F++Y  GV+     N  NLNHAV  VGYG      +W+IKNSWG+NWG
Sbjct: 244 PISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWG 303

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYP 328
             G+I M R+   A  CGIA  AS+P
Sbjct: 304 NKGYILMARNKNNA--CGIANLASFP 327


>gi|449530091|ref|XP_004172030.1| PREDICTED: vignain-like [Cucumis sativus]
          Length = 351

 Score =  239 bits (611), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 131/325 (40%), Positives = 192/325 (59%), Gaps = 23/325 (7%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           E S+   ++ W +   R  +N  E   RFK+FK N + + K N  G ++ KL LN+FAD+
Sbjct: 34  EKSLMQLYKRWSSHH-RISRNANEMHNRFKVFKNNAKHVFKVNLMG-KSLKLKLNQFADM 91

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNW---------FGYPDSRRGLPRSIDWRARGA 129
           +D+EF        M + NI+     +A            F Y  +   +P SIDWR +GA
Sbjct: 92  SDDEF------RNMYSSNITYYKDLHAKKIEATGGRIGGFMYEHANN-IPSSIDWRKKGA 144

Query: 130 VTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-GSRGCYGGWMDDAF 188
           V  +KNQG CG CW F+AVAAVE I +I+T  L+SLSE++VLDC     GC GG+ + AF
Sbjct: 145 VNAIKNQGRCGSCWAFAAVAAVESIHQIKTNELVSLSEEEVLDCDYRDGGCRGGFYNSAF 204

Query: 189 SYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVS 247
            +++ + G+T E  YPY    GYC  + G  K  RI  Y++VP  +E AL  AV+ QPV+
Sbjct: 205 EFMMDNDGVTIEDNYPYYEGNGYCRRRGGRNKRVRIDGYENVPRNNEYALMKAVAHQPVA 264

Query: 248 VAIDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGG 305
           VAI +    F++Y GG+F     CG N++H V +VGYG+  +G YW+I+N +G  WG  G
Sbjct: 265 VAIASGGSDFKFYGGGMFTENDFCGFNIDHTVVVVGYGTDEDGDYWIIRNQYGHRWGMNG 324

Query: 306 FIRMRRDVGGA-GLCGIARKASYPI 329
           +++M+R      G+CG+A + +YP+
Sbjct: 325 YMKMQRGAHSPQGVCGMAMQPAYPV 349


>gi|330803818|ref|XP_003289899.1| hypothetical protein DICPUDRAFT_154350 [Dictyostelium purpureum]
 gi|325080010|gb|EGC33584.1| hypothetical protein DICPUDRAFT_154350 [Dictyostelium purpureum]
          Length = 326

 Score =  239 bits (611), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 140/340 (41%), Positives = 196/340 (57%), Gaps = 27/340 (7%)

Query: 2   LIIMVTWASLVM-----SRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRF 56
           L++ + +  L++     +R   +       + WM +  ++Y N  E   R+ +F+ N   
Sbjct: 3   LVLALIFCFLIINCCSAARIFSQKQYQTAFQNWMVKHQKSYTND-EFGSRYSVFQDNMDI 61

Query: 57  IEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRR 116
           + K+N++G+ T  L LN  ADLT+EEF   + G K    N++ + ++             
Sbjct: 62  VAKWNQKGSNTI-LGLNVMADLTNEEFKKLYLGTK---ANVTYKKKTLV--------GVS 109

Query: 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS 176
           GLP S+DWRA GAVT VKNQG CG C+ FS   +VEGI +I + +L+ LSEQQ+LDCSGS
Sbjct: 110 GLPASVDWRANGAVTAVKNQGQCGGCYAFSTTGSVEGIHEITSQQLVPLSEQQILDCSGS 169

Query: 177 R---GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT- 232
               GC GG M ++F YII   GL  E  YPY    G C + +  +  A I  Y++V + 
Sbjct: 170 EGNNGCDGGLMTNSFEYIIAVGGLDTEASYPYTGEVGKCKFNKKNI-GATITGYKNVESG 228

Query: 233 SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGP-CGNN-LNHAVTIVGYGSSNEGPY 290
           SE  L+ AV+ QPVSVAIDAS   F+ Y+ GV+  P C +  L+H V  VGYGS +   Y
Sbjct: 229 SESDLQTAVAAQPVSVAIDASQSSFQLYASGVYYEPECSSTQLDHGVLAVGYGSQSGQDY 288

Query: 291 WLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           W++KNSWG +WGE GFI M R+      CGIA  AS+P A
Sbjct: 289 WIVKNSWGADWGENGFILMARNKDNN--CGIATMASFPTA 326


>gi|242020003|ref|XP_002430447.1| Cathepsin L precursor, putative [Pediculus humanus corporis]
 gi|212515585|gb|EEB17709.1| Cathepsin L precursor, putative [Pediculus humanus corporis]
          Length = 345

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 138/347 (39%), Positives = 195/347 (56%), Gaps = 26/347 (7%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           ++  +    L ++     D +  + +L+ A+  + Y N  E+  R KIF  N + I K N
Sbjct: 3   ILFFIALTVLSINAVSFYDLVMEEWQLFKAEHKKNYNNDVEEKFRMKIFMDNKQKITKHN 62

Query: 62  ---REGNQTYKLSLNEFADLTDEEFIASHTGYK---MPTRNISNQSQSYANNWFGYPDSR 115
              + G   YKL LN+++D+   EFI +  G+    +P    SN  +++    F  P + 
Sbjct: 63  TKYQRGEVGYKLGLNKYSDMLHHEFINTFNGFNKSIIPPHLRSNNGKTHLKGSFFIPPAN 122

Query: 116 RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS- 174
             LP+ +DW   GAVTPVK+QG CG CW FSA  A+EG+   +T  L+SLSEQ ++DCS 
Sbjct: 123 VKLPKHVDWVKLGAVTPVKDQGHCGSCWAFSATGALEGLHFRKTKVLVSLSEQNLIDCST 182

Query: 175 --GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQ---RGAMKAARIRSYQD 229
             G+ GC GG MD AF Y+  + G+  ER YPY+     C ++    GA+       Y D
Sbjct: 183 EEGNNGCNGGLMDQAFQYVRINGGIDTERSYPYEGNNDVCRYEPENSGAIDTG----YTD 238

Query: 230 VPT-SELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGN---NLNHAVTIVGYG 283
           VP   E AL+ AV+   PVSVAIDAS   F+ YS GV+  P C N   +L+H V +VGYG
Sbjct: 239 VPLGDEDALKSAVATVGPVSVAIDASQESFQLYSSGVYFEPNCKNEPESLDHGVLVVGYG 298

Query: 284 SSNEG--PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           +  E    YWL+KNSWG +WGE G+I+M R+      CGIA + S+P
Sbjct: 299 TDEETQQDYWLVKNSWGDSWGENGYIKMARNADNQ--CGIATQPSFP 343


>gi|426219875|ref|XP_004004143.1| PREDICTED: cathepsin L1 [Ovis aries]
          Length = 333

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/340 (39%), Positives = 197/340 (57%), Gaps = 26/340 (7%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L++ V    +  +    + S++ + ELW A   + Y +  E+  R  ++KKN + IE  N
Sbjct: 5   LLLTVLCLGIASAAPKFDHSLNTQWELWKAVHRKPY-DLNEEGWRKAVWKKNMKMIELHN 63

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL 118
           +E   G  ++ +++N F DLT EEF     G++   R  + + + +    F        +
Sbjct: 64  QEYSQGKHSFSMAMNAFGDLTSEEFRQMMNGFQ---RQENKKGKVFHETIFA------SI 114

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---G 175
           P S+DWR +G VTPVKNQG CG CW FS   A+EG    +TG+L+SLSEQ ++DCS   G
Sbjct: 115 PPSVDWREKGYVTPVKNQGKCGSCWAFSTTGALEGQMFRKTGKLVSLSEQNLVDCSQPEG 174

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSEL 235
           +RGC+GG MD+AF Y++   GL  E  YPY    G CN+      AA    + D+P  E 
Sbjct: 175 NRGCHGGLMDNAFQYVLDVGGLDSEESYPYTGLVGTCNYNP-KNSAANETGFVDLPKQEN 233

Query: 236 ALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-C-GNNLNHAVTIVGYG----SSNEG 288
           AL  AV+   P+SVA+DAS+P F++Y  G++  P C   +++H V +VGYG     S++ 
Sbjct: 234 ALMKAVATLGPISVAVDASNPSFQFYKSGIYYEPKCKSESVDHGVLVVGYGFEGADSDDN 293

Query: 289 PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
            YWL+KNSWG++WG  G+I+M +D      CGIA  ASYP
Sbjct: 294 KYWLVKNSWGKHWGINGYIKMAKDQNNH--CGIATMASYP 331


>gi|12805315|gb|AAH02125.1| Ctss protein [Mus musculus]
          Length = 340

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 135/339 (39%), Positives = 199/339 (58%), Gaps = 24/339 (7%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L  M    S+ M +   + ++    +LW     + YK++ E+ +R  I++KN +FI   N
Sbjct: 12  LFWMPLVCSVAMEQLQRDPTLDYHWDLWKKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHN 71

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQS-QSYANNWFGYPDSRRG 117
            E   G  TY++ +N+  D+T+EE +      ++P ++    + +SY+N         R 
Sbjct: 72  LEYSMGMHTYQVGMNDMGDMTNEEILCRMGALRIPRQSPKTVTFRSYSN---------RT 122

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           LP ++DWR +G VT VK QGSCG CW FSAV A+EG  K++TG+LISLS Q ++DCS   
Sbjct: 123 LPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEE 182

Query: 175 --GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP- 231
             G++GC GG+M +AF YII + G+  +  YPY+  +  C++     +AA    Y  +P 
Sbjct: 183 KYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKAMDEKCHYN-SKNRAATCSRYIQLPF 241

Query: 232 TSELALRYAV-SRQPVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGP 289
             E AL+ AV ++ PVSV IDAS   F +Y  GV+  P C  N+NH V +VGYG+ +   
Sbjct: 242 GDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTGNVNHGVLVVGYGTLDGKD 301

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           YWL+KNSWG N+G+ G+IRM R+      CGIA   SYP
Sbjct: 302 YWLVKNSWGLNFGDQGYIRMARN--NKNHCGIASDCSYP 338


>gi|66735056|gb|AAY53767.1| cysteine protease [Saprolegnia parasitica]
          Length = 523

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 126/315 (40%), Positives = 183/315 (58%), Gaps = 11/315 (3%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTD 80
           S  AK   WM + A    N  E   RF++F  N + IE  N++ + ++ +  NE++ LT 
Sbjct: 23  SYEAKFLSWMKKFAVKL-NPLEWVHRFEVFILNDQRIEAHNKDASSSFTMGHNEYSHLTF 81

Query: 81  EEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRARGAVTPVKNQGSC 139
           +EF    TG ++    I    QS A      P  +   +P  +DW  +G VTPVKNQG C
Sbjct: 82  DEFKKLRTGLRVSPSYI----QSRAKYALMAPAVNMTDVPNEMDWVEQGGVTPVKNQGMC 137

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIRSQGL 197
           G CW FS   A+EG   + + +L+S+SEQ+++DC  +G  GC GG MD+AF ++   +GL
Sbjct: 138 GSCWAFSTTGAIEGAAFVSSKQLVSVSEQELVDCDHNGDMGCNGGLMDNAFKWVKTHKGL 197

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPG 256
             E  YPY  +EG C  ++      ++ ++ DVP + E AL+ AV++QPVSVAI+A  P 
Sbjct: 198 CKEEDYPYHAKEGTCALKK-CKPVTKVTAFHDVPANDEQALKAAVAKQPVSVAIEADQPE 256

Query: 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG- 315
           F++Y  GVF   CG  L+H V +VGYG      YW +KNSWG +WG+ G+I++ R+ G  
Sbjct: 257 FQFYKSGVFDKSCGTKLDHGVLVVGYGEEGGKKYWKVKNSWGADWGDKGYIKLAREFGPE 316

Query: 316 AGLCGIARKASYPIA 330
            G CG+A   SYP A
Sbjct: 317 TGQCGVAMVPSYPTA 331


>gi|119389039|pdb|2C0Y|A Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human
           Procathepsin S
          Length = 315

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 135/326 (41%), Positives = 189/326 (57%), Gaps = 28/326 (8%)

Query: 17  LHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSL 72
           LH+D     H  LW     + YK + E+A+R  I++KN +F+   N E   G  +Y L +
Sbjct: 2   LHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGM 61

Query: 73  NEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGA 129
           N   D+T EE ++  +  ++P+   RNI+ +S           +  R LP S+DWR +G 
Sbjct: 62  NHLGDMTSEEVMSLMSSLRVPSQWQRNITYKS-----------NPNRILPDSVDWREKGC 110

Query: 130 VTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS----GSRGCYGGWMD 185
           VT VK QGSCG  W FSAV A+E   K++TG+L+SLS Q ++DCS    G++GC GG+M 
Sbjct: 111 VTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMT 170

Query: 186 DAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQ 244
            AF YII ++G+  +  YPY+  +  C +     +AA    Y ++P   E  L+ AV+ +
Sbjct: 171 TAFQYIIDNKGIDSDASYPYKAMDQKCQYD-SKYRAATCSKYTELPYGREDVLKEAVANK 229

Query: 245 -PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
            PVSV +DA  P F  Y  GV+  P C  N+NH V +VGYG  N   YWL+KNSWG N+G
Sbjct: 230 GPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFG 289

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYP 328
           E G+IRM R+ G    CGIA   SYP
Sbjct: 290 EEGYIRMARNKGNH--CGIASFPSYP 313


>gi|320164780|gb|EFW41679.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 334

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/317 (43%), Positives = 189/317 (59%), Gaps = 18/317 (5%)

Query: 22  ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDE 81
           ++ + E W     ++Y +  E+  R  +++ N   ++  N  G  +Y L +N FADLT E
Sbjct: 26  LNMEFEAWKRTFGKSYSDAVEEINRRAVWEANKMLVDAHNGAGIHSYTLGMNIFADLTHE 85

Query: 82  EFIASHTGYKMP-TRNISNQSQSYANNWFGYPDSRRG-LPRSIDWRARGAVTPVKNQGSC 139
           EF   + G K+   R  SN S ++       P +  G LP S+DWR  G VTPVK+QG C
Sbjct: 86  EFKRFYLGTKVDLNRPRSNFSSTF------IPTANVGALPDSVDWRTAGIVTPVKDQGQC 139

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQG 196
           G CW FS   +VEG    +TG+L+SLSEQ ++DCS   G++GC GG MDDAF YII ++G
Sbjct: 140 GSCWSFSTTGSVEGQHARKTGQLVSLSEQNLVDCSKAQGNQGCNGGLMDDAFQYIITNKG 199

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSR-QPVSVAIDASS 254
           +  E  YPY  ++G C +   A   A + S+QD+   SE  L+ AV+   PVSVAIDAS 
Sbjct: 200 IDTEASYPYTAKDGTCKF-NAANVGATLSSFQDITRGSESDLQNAVATVGPVSVAIDASK 258

Query: 255 PGFRYYSGGVF-AGPCGN-NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRD 312
             F+ Y+ GV+    C + +L+H V   GYG+SN  PYWL+KNSWG +WG+ G+I M R+
Sbjct: 259 NSFQLYTSGVYNEKKCSSTSLDHGVLAAGYGTSNGTPYWLVKNSWGSSWGQAGYIWMSRN 318

Query: 313 VGGAGLCGIARKASYPI 329
                 CGIA  ASYPI
Sbjct: 319 ANNQ--CGIATSASYPI 333


>gi|431896622|gb|ELK06034.1| Cathepsin K [Pteropus alecto]
          Length = 330

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/325 (41%), Positives = 196/325 (60%), Gaps = 18/325 (5%)

Query: 13  MSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTY 68
           +S  L+ + I   H ELW     + Y ++ ++  R  I++KN + I   N E   G  TY
Sbjct: 13  VSFALYPEEILDTHWELWKKSYGKQYDSKVDETSRRLIWEKNLKHISIHNLEAALGVHTY 72

Query: 69  KLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARG 128
           +L++N   D+T EE +   TG K+P       S+S +N+    PD     P S+D+R +G
Sbjct: 73  ELAMNHLGDMTSEEVVQKMTGLKVPP------SRSRSNDTLYIPDWEGRAPDSVDYRKKG 126

Query: 129 AVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDA 187
            VTPVKNQG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + GC GG+M +A
Sbjct: 127 YVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNA 186

Query: 188 FSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-P 245
           F Y+ +++G+  E  YPY  ++  C +     KAA+ R Y+++P  +E AL+ AV+R  P
Sbjct: 187 FQYVQKNRGIDSEDAYPYVGQDESCMYNPTG-KAAKCRGYKEIPEGNEKALKRAVARVGP 245

Query: 246 VSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGE 303
           +SVAIDAS   F++Y  GV+     N  NLNHAV  VGYG      +W+IKNSWG+NWG 
Sbjct: 246 ISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKGRKHWIIKNSWGENWGN 305

Query: 304 GGFIRMRRDVGGAGLCGIARKASYP 328
            G++ M R+   A  CGIA  AS+P
Sbjct: 306 KGYVLMARNKNNA--CGIANLASFP 328


>gi|426216528|ref|XP_004002514.1| PREDICTED: cathepsin K [Ovis aries]
          Length = 330

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/318 (42%), Positives = 193/318 (60%), Gaps = 17/318 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEF 75
           E+ +  + ELW     + Y ++ ++  R  I++KN + I   N E   G  TY+L++N  
Sbjct: 20  EEILDTQWELWKKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHL 79

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
            D+T EE +   TG K+P       S+S +N+    PD     P S+D+R +G VTPVKN
Sbjct: 80  GDMTSEEVVQKMTGLKVPA------SRSRSNDTLYIPDWEGRTPDSVDYRKKGYVTPVKN 133

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYIIRS 194
           QG CG CW FS+V A+EG  K +TG+L++LS Q ++DC S + GC GG+M +AF Y+ ++
Sbjct: 134 QGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKN 193

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVAIDA 252
           +G+  E  YPY  ++  C +     KAA+ R Y+++P  +E AL+ AV+R  P+SVAIDA
Sbjct: 194 RGIDSEDAYPYVGQDENCMYNPTG-KAAKCRGYREIPEGNEKALKRAVARVGPISVAIDA 252

Query: 253 SSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMR 310
           S   F++Y  GV+     N  NLNHAV  VGYG      +W+IKNSWG+NWG  G+I M 
Sbjct: 253 SLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMA 312

Query: 311 RDVGGAGLCGIARKASYP 328
           R+   A  CGIA  AS+P
Sbjct: 313 RNKNNA--CGIANLASFP 328


>gi|72008176|ref|XP_780713.1| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 335

 Score =  239 bits (610), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 133/341 (39%), Positives = 204/341 (59%), Gaps = 21/341 (6%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L +++  A +V S ++           W  +  + Y +  E+A R  I++KN   + K N
Sbjct: 4   LSVLLVAACVVSSLSMSFTDFDEDWNQWKNEHGKRYLSDEEEASRKLIWEKNLDIVIKHN 63

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG- 117
            +   G+ TY L +N+FADL +EEF+A  TG+++   + + +  ++       P +  G 
Sbjct: 64  LKYDLGHFTYALGMNQFADLKNEEFVAMMTGFRVNGTSKAAKGSTF------LPSNNIGE 117

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           LP+++DWR +G VTPVK+QG CG CW FS   ++EG     TG+L+SLSEQ ++DCS   
Sbjct: 118 LPKTVDWRTKGYVTPVKDQGQCGSCWAFSTTGSLEGQHFKATGKLVSLSEQNLVDCSGKE 177

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-S 233
           G+ GC GG MD AF YII++ G+  E  YPY+  +G C++++  +  A +  Y DV + S
Sbjct: 178 GNEGCDGGLMDQAFQYIIKAGGIDTEESYPYKAVDGECHFKKANI-GATVTGYTDVTSDS 236

Query: 234 ELALRYAVSR-QPVSVAIDASSPGFRYYSGGVFAGP-CGNN-LNHAVTIVGYGSSNEGP- 289
           E AL+ AV+   P+SVAIDAS   F+ Y  GV+  P C +  L+H V  VGYG++++G  
Sbjct: 237 ETALQKAVAHIGPISVAIDASHMSFQLYKSGVYNEPDCSSTLLDHGVLAVGYGTTSDGTD 296

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           YW++KNSW + WG  G++ M R+      CGIA +ASYP+ 
Sbjct: 297 YWIVKNSWAETWGMNGYLWMSRNKDNQ--CGIATQASYPLV 335


>gi|346466067|gb|AEO32878.1| hypothetical protein [Amblyomma maculatum]
          Length = 358

 Score =  239 bits (610), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 132/339 (38%), Positives = 198/339 (58%), Gaps = 25/339 (7%)

Query: 4   IMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE 63
           + VT A++      H++ + A+   + A   + Y ++ E+  R KI+ +N   I + N +
Sbjct: 33  LFVTAAAIT-----HQELVGAEWSAFKALHGKEYHSETEEYYRLKIYMENRLKIARHNEK 87

Query: 64  ---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD--SRRGL 118
                 +YKL++NEF DL   EF+++  G+K   R+   +   Y       P+    + L
Sbjct: 88  YANNKASYKLAMNEFGDLLHHEFVSTRNGFKRNYRSTPREGSFYIE-----PEGIEDKHL 142

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---G 175
           P+++DWR +GAVTPVKNQG CG CW FS   ++EG    +TGR++SLSEQ ++DCS   G
Sbjct: 143 PKTVDWRKKGAVTPVKNQGQCGSCWAFSTTGSLEGQHFRKTGRMVSLSEQNLVDCSGKFG 202

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SE 234
           + GC GG MD+AF YI  + G+  E  YPY   +G C++++  + A     + D+P  +E
Sbjct: 203 NNGCEGGLMDNAFKYIKANGGIDTELSYPYNGTDGICHFEKSDVGATDT-GFVDIPEGNE 261

Query: 235 LALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEGPYW 291
             L+ AV+   PVSVAIDAS   F++YS GV+  P     +L+H V +VGYG+ +   YW
Sbjct: 262 QLLKKAVATVGPVSVAIDASHESFQFYSQGVYDEPECSSESLDHGVLVVGYGTKDGQDYW 321

Query: 292 LIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           L+KNSWG  WG+ G+I M R+      CGIA  ASYP+ 
Sbjct: 322 LVKNSWGTTWGDDGYIYMTRN--KENQCGIASSASYPLV 358


>gi|242079875|ref|XP_002444706.1| hypothetical protein SORBIDRAFT_07g026400 [Sorghum bicolor]
 gi|241941056|gb|EES14201.1| hypothetical protein SORBIDRAFT_07g026400 [Sorghum bicolor]
          Length = 374

 Score =  239 bits (610), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/311 (44%), Positives = 182/311 (58%), Gaps = 25/311 (8%)

Query: 41  AEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNIS-N 99
           AEK  RF  FK N R I +FN+  +++YKL+LN+F+ LT+EEF +      +P  +   N
Sbjct: 64  AEKQRRFDAFKMNARQINEFNKREDESYKLALNQFSGLTEEEFNSGMYTGALPELDAGGN 123

Query: 100 QSQSYANNWFGYPDSRRG------------LPRSIDWRARGAVTPVKNQGSCGCCWIFSA 147
            S S   +     D                +P   DWR  GAVTPVKNQG CG CW FS 
Sbjct: 124 ISSSVGTSGMSMTDDNDDKLLVSAGGNDDKVPAKWDWRRHGAVTPVKNQGQCGSCWAFSM 183

Query: 148 VAAVEGITKIRTGRLISLSEQQVLDCSGSRGCYGGWMDDAFSYIIRSQGLTDER------ 201
           V +VEGI  I+TG+L +LSEQ+VLDCSG+  C GG    +F + +R     D +      
Sbjct: 184 VGSVEGINAIKTGKLQTLSEQEVLDCSGAGTCKGGNTYKSFDHAMRPGLALDHQGNPPYY 243

Query: 202 -VYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGFRYY 260
             Y  ++++   N  +  +K    R  ++   +EL LR  VS+QPVSV ++AS   F  Y
Sbjct: 244 PAYVAEKKKCRFNPNKPVVKINGKRMMRNTNEAELLLR--VSKQPVSVVVEASQ-AFSRY 300

Query: 261 SGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVG-GAGL 318
           S GVF GPCG NLNHAV +VGYG++  G  YW++KNSWG+ WGE G+IRM+R+VG  AGL
Sbjct: 301 SKGVFTGPCGTNLNHAVLVVGYGTTPNGINYWIVKNSWGKGWGENGYIRMKRNVGTKAGL 360

Query: 319 CGIARKASYPI 329
           CGI     YPI
Sbjct: 361 CGIYMMPMYPI 371


>gi|149510440|ref|XP_001518002.1| PREDICTED: cathepsin K-like [Ornithorhynchus anatinus]
          Length = 618

 Score =  239 bits (610), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/335 (40%), Positives = 200/335 (59%), Gaps = 22/335 (6%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L++++   +L  S      S+  + ELW     + Y ++ ++  R  +++KN ++I   N
Sbjct: 296 LVLLLPSVTLAASA-----SLDVQWELWKKTHQKQYNSKEDETSRRLVWEKNLQYISAHN 350

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL 118
            E   G  T++L++N   D+T EE + + TG K+P       +++ +N+    PD     
Sbjct: 351 LEFSLGIHTFELAMNHLGDMTSEEVVRTMTGLKVPP------ARTQSNDTLYSPDWAERA 404

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR- 177
           P SID+R +G VTPVKNQG CG CW FS+V A+EG  K +TGRL+ LS Q ++DC  S  
Sbjct: 405 PDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGRLLDLSPQNLVDCVASND 464

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GG+M +AF Y+  ++G+  E  YPY  ++  C +     KAA+ R Y++VP   E A
Sbjct: 465 GCGGGYMTNAFQYVHDNRGIDSEDAYPYVGQDEPCRYSPTG-KAAKCRGYREVPVGDEKA 523

Query: 237 LRYAVSR-QPVSVAIDASSPGFRYYSGGV-FAGPC-GNNLNHAVTIVGYGSSNEGPYWLI 293
           L+ AV+R  PV+VAIDAS   F++YS GV F   C G NLNHA+  VGYG+     +W+I
Sbjct: 524 LKRAVARVGPVAVAIDASLSSFQFYSKGVYFDENCNGANLNHALLAVGYGAQKGAKHWII 583

Query: 294 KNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           KNSWG+ WG  G++ M R+   A  CGIA  AS+P
Sbjct: 584 KNSWGEEWGNKGYVLMARNKNNA--CGIASLASFP 616


>gi|74178074|dbj|BAE29827.1| unnamed protein product [Mus musculus]
 gi|74178231|dbj|BAE29900.1| unnamed protein product [Mus musculus]
 gi|74220784|dbj|BAE31361.1| unnamed protein product [Mus musculus]
          Length = 326

 Score =  239 bits (610), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/336 (39%), Positives = 198/336 (58%), Gaps = 24/336 (7%)

Query: 5   MVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE- 63
           M    S+ M +   + ++    +LW     + YK++ E+ +R  I++KN +FI   N E 
Sbjct: 1   MPLVCSVAMEQLQRDPTLDYHWDLWKKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEY 60

Query: 64  --GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQS-QSYANNWFGYPDSRRGLPR 120
             G  TY++ +N+  D+T+EE +      ++P ++    + +SY+N         R LP 
Sbjct: 61  SMGMHTYQVGMNDMGDMTNEEILCRMGALRIPRQSPKTVTFRSYSN---------RTLPD 111

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-----G 175
           ++DWR +G VT VK QGSCG CW FSAV A+EG  K++TG+LISLS Q ++DCS     G
Sbjct: 112 TVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYG 171

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSE 234
           ++GC GG+M +AF YII + G+  +  YPY+  +  C++     +AA    Y  +P   E
Sbjct: 172 NKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEKCHYN-SKNRAATCSRYIQLPFGDE 230

Query: 235 LALRYAV-SRQPVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPYWL 292
            AL+ AV ++ PVSV IDAS   F +Y  GV+  P C  N+NH V +VGYG+ +   YWL
Sbjct: 231 DALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTGNVNHGVLVVGYGTLDGKDYWL 290

Query: 293 IKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           +KNSWG N+G+ G+IRM R+      CGIA   SYP
Sbjct: 291 VKNSWGLNFGDQGYIRMARN--NKNHCGIASYCSYP 324


>gi|151573016|gb|ABS17683.1| cathepsin L-1 [Artemia persimilis]
          Length = 334

 Score =  239 bits (610), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 133/343 (38%), Positives = 202/343 (58%), Gaps = 24/343 (6%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           LI ++    + +S  L   ++ A    L+ A   + Y +Q E+  R KI+ +N   + K 
Sbjct: 2   LIFLLGAVFVQLSAALSLTNLLADEWHLFKATHKKEYPSQLEEKFRMKIYLENKHKVAKH 61

Query: 61  N---REGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N    +G ++Y++++N+F DL   EF +   GY+   +N S    ++    F  P +   
Sbjct: 62  NILFEKGEKSYQVAMNKFGDLLHHEFRSIMNGYQHKKQNSSRAESTFT---FMEP-ANVE 117

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           +P S+DWR +GA+TPVK+QG CG CW FS+  A+EG T  +TG+L+SL EQ ++DCS   
Sbjct: 118 VPESVDWREKGAITPVKDQGQCGPCWAFSSTGALEGQTFRKTGKLVSLREQNLIDCSGKY 177

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNW---QRGAMKAARIRSYQDVP 231
           G+ GC GG MD AF YI  ++G+  E  YPY+  +  C +    RGA+     R + D+P
Sbjct: 178 GNEGCNGGLMDQAFQYIKDNKGIDTENTYPYEAEDDVCRYNPRNRGAVD----RGFVDIP 233

Query: 232 T-SELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGPC--GNNLNHAVTIVGYGSSNE 287
           +  E  L+ AV+   PVSVAIDAS   F++YS GV+  P    ++L+H V +VGYGS N 
Sbjct: 234 SGEEDKLKAAVATVGPVSVAIDASHESFQFYSKGVYYEPSCDSDDLDHGVLVVGYGSDNG 293

Query: 288 GPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
             YWL+KNSW ++WG+ G+I++ R+      CG+A  ASYP+ 
Sbjct: 294 KDYWLVKNSWSEHWGDQGYIKIARNRKNH--CGVATAASYPLV 334


>gi|334324655|ref|XP_001370975.2| PREDICTED: cathepsin S-like isoform 1 [Monodelphis domestica]
          Length = 331

 Score =  239 bits (609), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 133/338 (39%), Positives = 196/338 (57%), Gaps = 22/338 (6%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           L+I +  A   +   LH D +   H +LW     + YK Q E+  R  I++KN +++   
Sbjct: 3   LVIWMFLAYTPIMAHLHRDPMLDGHWDLWKKTHGKQYKGQNEEIARRLIWEKNLKYVTLH 62

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N E   G  +Y LS+N   D+T EE I+  +  ++P +   N +   ++N        + 
Sbjct: 63  NLEHSMGLHSYDLSMNHLGDMTSEEVISLMSSLRIPNQWNRNTTYRLSSN--------QK 114

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR 177
           LP S+DWR +G VT VK QGSCG CW FSAV A+E   K++TG+L+SLS Q ++DCS  +
Sbjct: 115 LPDSVDWREKGCVTEVKYQGSCGSCWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTDK 174

Query: 178 ----GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT- 232
               GC GG+M  AF Y+I + G+  +  YPY+  +G C +   A +AA    Y ++P  
Sbjct: 175 YDNHGCNGGFMTSAFQYVIDNNGIDSDVSYPYKATDGKCQYNP-ASRAATCSKYTELPYG 233

Query: 233 SELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPY 290
           SE AL+ AV+ + PVSV IDA +P F  Y  GV+  P C   +NH V ++GYG+ +   Y
Sbjct: 234 SEEALKEAVANKGPVSVGIDAKTPSFFLYKSGVYYDPSCTQKVNHGVLVIGYGNLDGQDY 293

Query: 291 WLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           WL+KNSWG ++G+ G++R+ R+ G    CGIA   SYP
Sbjct: 294 WLVKNSWGLHFGDKGYVRIARNRGNH--CGIANFPSYP 329


>gi|27728675|gb|AAO18731.1| cysteine protease [Gossypium hirsutum]
          Length = 389

 Score =  239 bits (609), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 131/328 (39%), Positives = 193/328 (58%), Gaps = 28/328 (8%)

Query: 17  LHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN--REGNQ-TYKLSLN 73
           L E+ +    + W  +  + Y++  E   RF+ FK N ++I + N  R+ N+  + + LN
Sbjct: 40  LSEERVLEIFQQWKEKHRKVYRHAEEAEKRFENFKGNLKYILERNAKRKANKWEHHVGLN 99

Query: 74  EFADLTDEEFIASH-TGYKMP-------TRNISNQSQSYANNWFGYPDSRRGLPRSIDWR 125
           +FAD+++EEF  ++ +  K P       +RN+  + QS               P S+DWR
Sbjct: 100 KFADMSNEEFRKAYLSKVKKPINKGITLSRNMRRKVQSC------------DAPSSLDWR 147

Query: 126 ARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-GCYGGWM 184
             G VT VK+QGSCG CW FS+  A+EGI  + TG LISLSEQ++++C  S  GC GG+M
Sbjct: 148 NYGVVTAVKDQGSCGSCWAFSSTGAMEGINALVTGDLISLSEQELVECDTSNYGCEGGYM 207

Query: 185 DDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQ 244
           D AF ++I + G+  E  YPY   +G CN  +   K   I  YQDV  S+ AL  AV++Q
Sbjct: 208 DYAFEWVINNGGIDSESDYPYTGVDGTCNTTKEETKVVSIDGYQDVEQSDSALLCAVAQQ 267

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCG---NNLNHAVTIVGYGSSNEGPYWLIKNSWGQNW 301
           PVSV ID S+  F+ Y+GG++ G C    ++++HAV IVGYGS +   YW++KNSWG +W
Sbjct: 268 PVSVGIDGSAIDFQLYTGGIYDGSCSDDPDDIDHAVLIVGYGSEDSEEYWIVKNSWGTSW 327

Query: 302 GEGGFIRMRRDVGGA-GLCGIARKASYP 328
           G  G+  ++RD     G+C +   ASYP
Sbjct: 328 GIDGYFYLKRDTDLPYGVCAVNAMASYP 355


>gi|414591039|tpg|DAA41610.1| TPA: hypothetical protein ZEAMMB73_356414 [Zea mays]
          Length = 376

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 150/343 (43%), Positives = 199/343 (58%), Gaps = 30/343 (8%)

Query: 9   ASLVMSRTLH-EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQT 67
           A L+  + L  E+S+ + +E W +    + ++  EK  RF+ FK N R I +FN+  +  
Sbjct: 27  ALLLTDKDLESEESMWSLYERWRSVHTVS-RDLREKQSRFEAFKANARHIGEFNKRKDVP 85

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRN----------ISNQSQSYANNWFGYPDSRRG 117
           YKL LN+FADLT EEF++ +TG K+              +S+  +S         D+   
Sbjct: 86  YKLGLNKFADLTQEEFVSKYTGAKVVDSEAAARLASGVRVSSSDESPPQLAASVGDA--- 142

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR 177
            P + DWR  GAVT VK+QG CG CW FSAV AVE +  I TG L++LSEQQ+LDCSG+ 
Sbjct: 143 -PDAWDWRDHGAVTAVKDQGQCGSCWAFSAVGAVESVNAIVTGNLLTLSEQQMLDCSGAG 201

Query: 178 GC-YGGWMDDAFSYIIRSQGLTDERV--YPYQRREGY-----CNWQRGAMKAARIRS-YQ 228
            C YGG+   A  Y I S GLT ++    PY +R        C +        +I S Y 
Sbjct: 202 DCTYGGYTYYAMLYAI-SNGLTLDQCGKTPYYQRYDAQQHLPCRFDAKKPPVVKIDSMYV 260

Query: 229 DVPTSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG 288
                E AL+ AV +QPVSV IDA   G  YYS GVF GPCG +LNHAV +VGYG++ +G
Sbjct: 261 MNNADEAALKRAVYKQPVSVLIDAG--GIGYYSEGVFTGPCGTSLNHAVLLVGYGATADG 318

Query: 289 P-YWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
             YW++KNSWG +WGE G+ R++RDVG   GLCGI     YPI
Sbjct: 319 TKYWIVKNSWGADWGEKGYFRLKRDVGTQGGLCGITMYPIYPI 361


>gi|1709574|sp|P10056.2|PAPA3_CARPA RecName: Full=Caricain; AltName: Full=Papaya peptidase A; AltName:
           Full=Papaya proteinase III; Short=PPIII; AltName:
           Full=Papaya proteinase omega; Flags: Precursor
 gi|18098|emb|CAA46862.1| proteinase omega [Carica papaya]
          Length = 348

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 131/303 (43%), Positives = 188/303 (62%), Gaps = 11/303 (3%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           WM    + Y+N  EK  RF+IFK N  +I++ N++ N +Y L LNEFADL+++EF   + 
Sbjct: 51  WMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKK-NNSYWLGLNEFADLSNDEFNEKYV 109

Query: 89  GYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAV 148
           G  +     +   QSY   +    +    LP ++DWR +GAVTPV++QGSCG CW FSAV
Sbjct: 110 GSLID----ATIEQSYDEEFIN--EDTVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAV 163

Query: 149 AAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQR 207
           A VEGI KIRTG+L+ LSEQ+++DC   S GC GG+   A  Y+ ++ G+     YPY+ 
Sbjct: 164 ATVEGINKIRTGKLVELSEQELVDCERRSHGCKGGYPPYALEYVAKN-GIHLRSKYPYKA 222

Query: 208 REGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFA 266
           ++G C  ++      +      V P +E  L  A+++QPVSV +++    F+ Y GG+F 
Sbjct: 223 KQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFE 282

Query: 267 GPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKA 325
           GPCG  ++HAVT VGYG S    Y LIKNSWG  WGE G+IR++R  G + G+CG+ + +
Sbjct: 283 GPCGTKVDHAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSS 342

Query: 326 SYP 328
            YP
Sbjct: 343 YYP 345


>gi|341940310|sp|O70370.2|CATS_MOUSE RecName: Full=Cathepsin S; Flags: Precursor
          Length = 340

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 135/339 (39%), Positives = 199/339 (58%), Gaps = 24/339 (7%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L  M    S+ M +   + ++    +LW     + YK++ E+ +R  I++KN +FI   N
Sbjct: 12  LFWMPLVCSVAMEQLQRDPTLDYHWDLWKKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHN 71

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQS-QSYANNWFGYPDSRRG 117
            E   G  TY++ +N+  D+T+EE +      ++P ++    + +SY+N         R 
Sbjct: 72  LEYSMGMHTYQVGMNDMGDMTNEEILCRMGALRIPRQSPKTVTFRSYSN---------RT 122

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           LP ++DWR +G VT VK QGSCG CW FSAV A+EG  K++TG+LISLS Q ++DCS   
Sbjct: 123 LPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEE 182

Query: 175 --GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP- 231
             G++GC GG+M +AF YII + G+  +  YPY+  +  C++     +AA    Y  +P 
Sbjct: 183 KYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEKCHYN-SKNRAATCSRYIQLPF 241

Query: 232 TSELALRYAV-SRQPVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGP 289
             E AL+ AV ++ PVSV IDAS   F +Y  GV+  P C  N+NH V +VGYG+ +   
Sbjct: 242 GDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTGNVNHGVLVVGYGTLDGKD 301

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           YWL+KNSWG N+G+ G+IRM R+      CGIA   SYP
Sbjct: 302 YWLVKNSWGLNFGDQGYIRMARN--NKNHCGIASYCSYP 338


>gi|390608645|ref|NP_001254624.1| cathepsin S isoform 1 preproprotein [Mus musculus]
 gi|74214026|dbj|BAE29430.1| unnamed protein product [Mus musculus]
          Length = 343

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 135/339 (39%), Positives = 199/339 (58%), Gaps = 24/339 (7%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L  M    S+ M +   + ++    +LW     + YK++ E+ +R  I++KN +FI   N
Sbjct: 15  LFWMPLVCSVAMEQLQRDPTLDYHWDLWKKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHN 74

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQS-QSYANNWFGYPDSRRG 117
            E   G  TY++ +N+  D+T+EE +      ++P ++    + +SY+N         R 
Sbjct: 75  LEYSMGMHTYQVGMNDMGDMTNEEILCRMGALRIPRQSPKTVTFRSYSN---------RT 125

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           LP ++DWR +G VT VK QGSCG CW FSAV A+EG  K++TG+LISLS Q ++DCS   
Sbjct: 126 LPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEE 185

Query: 175 --GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP- 231
             G++GC GG+M +AF YII + G+  +  YPY+  +  C++     +AA    Y  +P 
Sbjct: 186 KYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEKCHYN-SKNRAATCSRYIQLPF 244

Query: 232 TSELALRYAV-SRQPVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGP 289
             E AL+ AV ++ PVSV IDAS   F +Y  GV+  P C  N+NH V +VGYG+ +   
Sbjct: 245 GDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTGNVNHGVLVVGYGTLDGKD 304

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           YWL+KNSWG N+G+ G+IRM R+      CGIA   SYP
Sbjct: 305 YWLVKNSWGLNFGDQGYIRMARN--NKNHCGIASYCSYP 341


>gi|392306967|ref|NP_067256.3| cathepsin S isoform 2 preproprotein [Mus musculus]
 gi|26390492|dbj|BAC25906.1| unnamed protein product [Mus musculus]
 gi|148706872|gb|EDL38819.1| cathepsin S [Mus musculus]
          Length = 342

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 135/339 (39%), Positives = 199/339 (58%), Gaps = 24/339 (7%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L  M    S+ M +   + ++    +LW     + YK++ E+ +R  I++KN +FI   N
Sbjct: 14  LFWMPLVCSVAMEQLQRDPTLDYHWDLWKKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHN 73

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQS-QSYANNWFGYPDSRRG 117
            E   G  TY++ +N+  D+T+EE +      ++P ++    + +SY+N         R 
Sbjct: 74  LEYSMGMHTYQVGMNDMGDMTNEEILCRMGALRIPRQSPKTVTFRSYSN---------RT 124

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           LP ++DWR +G VT VK QGSCG CW FSAV A+EG  K++TG+LISLS Q ++DCS   
Sbjct: 125 LPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEE 184

Query: 175 --GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP- 231
             G++GC GG+M +AF YII + G+  +  YPY+  +  C++     +AA    Y  +P 
Sbjct: 185 KYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEKCHYN-SKNRAATCSRYIQLPF 243

Query: 232 TSELALRYAV-SRQPVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGP 289
             E AL+ AV ++ PVSV IDAS   F +Y  GV+  P C  N+NH V +VGYG+ +   
Sbjct: 244 GDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTGNVNHGVLVVGYGTLDGKD 303

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           YWL+KNSWG N+G+ G+IRM R+      CGIA   SYP
Sbjct: 304 YWLVKNSWGLNFGDQGYIRMARN--NKNHCGIASYCSYP 340


>gi|390368662|ref|XP_780781.2| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  238 bits (608), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/339 (40%), Positives = 209/339 (61%), Gaps = 21/339 (6%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L+ +   +SL MS T  ++  +     W  +  + Y +  E+A R  I++KN   + K 
Sbjct: 7   LLVAVCVVSSLSMSFTDFDEDWNQ----WKNEHGKRYLSDEEEASRKLIWEKNLDIVIKH 62

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N +   G+ TY L +N+FADL +EEF+A  TG++     ++  S++   + F   ++   
Sbjct: 63  NLKYDLGHFTYALGMNQFADLQNEEFVAMMTGFR-----VNGTSKAAKGSTFLPSNNVDK 117

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-GS 176
           LP+++DWR +G VTPVK+QG CG CW FSA  ++EG    +TG+L+SLSEQ ++DCS  +
Sbjct: 118 LPKTVDWRTKGYVTPVKDQGQCGSCWAFSATGSLEGQQFKKTGKLVSLSEQNLVDCSYRN 177

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SEL 235
            GC+GG+MD AF YII + G+  E  Y Y+  +G C++++ A   A +  Y DV + SE 
Sbjct: 178 YGCHGGFMDRAFQYIIDAGGIDTEATYSYRAVDGNCHFKK-ANVGATVTGYTDVTSGSEK 236

Query: 236 ALRYAVSR-QPVSVAIDASSPGFRYYSGGVFAGP-CGNN-LNHAVTIVGYGSSNEGP-YW 291
           AL+ AV+   P+SVAIDAS   F++Y  GV+  P C    L HAV +VGYG++++G  YW
Sbjct: 237 ALQKAVAHIGPISVAIDASHKFFKFYKSGVYNEPGCSTTRLGHAVLVVGYGTTSDGTDYW 296

Query: 292 LIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           ++KNSW + WG  G++ M R+      CGIA +ASYP+ 
Sbjct: 297 IVKNSWAKTWGMNGYLWMSRNKDNQ--CGIASEASYPMV 333


>gi|159485468|ref|XP_001700766.1| cysteine endopeptidase [Chlamydomonas reinhardtii]
 gi|158281265|gb|EDP07020.1| cysteine endopeptidase [Chlamydomonas reinhardtii]
          Length = 498

 Score =  238 bits (608), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 137/311 (44%), Positives = 191/311 (61%), Gaps = 12/311 (3%)

Query: 28  LWMAQSARTY-KNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS 86
           LW  Q ARTY +   E   R  +F  N R I + NR  N    L+LNE+AD T EEF A 
Sbjct: 42  LWATQHARTYSEGSPEYTRRLGVFADNVRAIAEQNRR-NTGITLALNEYADETWEEFAAK 100

Query: 87  HTGYKMPTRNI-SNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIF 145
             G K+    + + +++S +++   +  ++   P ++DWRA+ AVT VKNQG CG CW F
Sbjct: 101 RLGLKISQEQLKAREARSSSSSSSSWRYAQVQTPAAVDWRAKNAVTQVKNQGQCGSCWAF 160

Query: 146 SAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIRSQGLTDERVY 203
           SAV ++EG   + TG+L++LSEQQ++DC  + + GC GG MDDAF Y++ + G+  E  Y
Sbjct: 161 SAVGSIEGANALATGQLVALSEQQLVDCDTASNMGCSGGLMDDAFKYVLDNGGIDTEEDY 220

Query: 204 PYQRREGY---CNWQRGAMK-AARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGFRY 259
            Y    G+   CN ++   + A  I  Y+DVPTSE AL  AV+ QPV+VAI AS+   ++
Sbjct: 221 SYWSGYGFGFWCNKRKQTDRPAVSIDGYEDVPTSEPALLKAVAGQPVAVAICASA-NMQF 279

Query: 260 YSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGGAGL 318
           YS GV    C   LNH V  VGY +S++  PYW++KNSWG +WGE G+ R++   G  GL
Sbjct: 280 YSSGVI-NSCCEGLNHGVLAVGYDTSDKAQPYWIVKNSWGGSWGEQGYFRLKMGEGPKGL 338

Query: 319 CGIARKASYPI 329
           CGIA  ASY +
Sbjct: 339 CGIASAASYAV 349


>gi|167526493|ref|XP_001747580.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774026|gb|EDQ87660.1| predicted protein [Monosiga brevicollis MX1]
          Length = 330

 Score =  238 bits (608), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 126/286 (44%), Positives = 168/286 (58%), Gaps = 20/286 (6%)

Query: 47  FKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYAN 106
           F+    N R IE  N  GN ++ + + +FADLT  EF A    + M      N+      
Sbjct: 48  FRCHLANLRVIEAHN-AGNSSFTMGITQFADLTAAEFSAYVKRFPMNVTRPRNEV----- 101

Query: 107 NWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLS 166
            W           + +DWR + AVT +KNQG CG CW FS   +VEG   I TG+L+SLS
Sbjct: 102 -WI-----TEAPLQEVDWRQKNAVTEIKNQGQCGSCWSFSTTGSVEGAHAIATGKLVSLS 155

Query: 167 EQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAAR 223
           EQQ++DCS   G+ GC GG MD AF Y+I + GL  E  YPY   +G CN ++    AA 
Sbjct: 156 EQQLMDCSTRYGNHGCNGGLMDYAFEYVIANGGLDTEEDYPYTAEDGKCNTEKEKKHAAE 215

Query: 224 IRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGY 282
           I  +++VP   E  L  AVS  PVSVAI+A   GF++Y+ GVF G CG +L+H V +VGY
Sbjct: 216 IHGFRNVPKEHEDQLAAAVSIGPVSVAIEADQAGFQHYTSGVFDGKCGTSLDHGVLVVGY 275

Query: 283 GSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
                  YW++KNSWG++WGE G+IR++R V   G+CGI  +ASYP
Sbjct: 276 SDD----YWIVKNSWGKSWGEEGYIRLKRGVDKKGMCGITMQASYP 317


>gi|432114311|gb|ELK36239.1| Cathepsin S [Myotis davidii]
          Length = 340

 Score =  238 bits (607), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 139/341 (40%), Positives = 201/341 (58%), Gaps = 29/341 (8%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           L++++   S  M++ LH+D     H +LW     + Y  + E+  R  I++KN +++   
Sbjct: 13  LLLVLLGCSSAMAQ-LHKDPTLDHHWDLWKKTYGKQYTEENEEVTRRFIWEKNLKYVMLH 71

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPDS 114
           N E   G  +Y L +N  AD+T EE +   +  ++P+   RN++ +S          P+ 
Sbjct: 72  NLEHSMGMHSYDLGMNHLADMTSEEVMLLMSSLRVPSQWQRNVTFKSN---------PNQ 122

Query: 115 RRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS 174
           +  LP S+DWR +G VT VK QGSCG CW FSAV A+E   K++TG+L+SLS Q ++DCS
Sbjct: 123 K--LPDSMDWRDKGCVTEVKYQGSCGSCWAFSAVGALEAQLKLKTGKLVSLSVQNLVDCS 180

Query: 175 ----GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV 230
                ++GC GG+M +AF YII + G+  E  YPY+  +G C +     +AA    Y ++
Sbjct: 181 TGKYSNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDGKCQYDVKN-RAATCSKYVEL 239

Query: 231 P-TSELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAG-PCGNNLNHAVTIVGYGSSNE 287
           P  +E AL+ AV+ + PVSVAIDAS P F  Y  GV+    C  N+NH V  VGYG+ N 
Sbjct: 240 PFGNEEALKEAVANKGPVSVAIDASHPSFFLYRSGVYYDKACTLNVNHGVLAVGYGNYNG 299

Query: 288 GPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
             YWL+KNSWG ++GE G+IRM R+ G    CGIA   SYP
Sbjct: 300 KDYWLVKNSWGLHFGEQGYIRMARNSGNH--CGIASYPSYP 338


>gi|414887427|tpg|DAA63441.1| TPA: hypothetical protein ZEAMMB73_713985 [Zea mays]
          Length = 355

 Score =  238 bits (607), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 138/330 (41%), Positives = 194/330 (58%), Gaps = 28/330 (8%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISA-KHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           ML++M   AS    R   ED +   +   W A   R+Y   AE+  RF+++++N   IE 
Sbjct: 16  MLVLMAGAAS--GGRVDVEDMLMMDRFRAWQATYNRSYLTAAERLRRFEVYRQNMELIEA 73

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGY---PDSRR 116
            NR    +Y+LS   F DLT EEF+A+HT   M TR  ++++             P S  
Sbjct: 74  TNRRAELSYQLSETPFTDLTSEEFLATHT---MSTRLHASEAARRHRELITTHAGPVSDG 130

Query: 117 G-------------LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLI 163
           G             +P S+DWR +GAVT VK+QG+CG CW F+ VAA+EG+ KIRTG+L+
Sbjct: 131 GRQWNRRNYTTDLDVPESVDWRTKGAVTTVKDQGACGGCWSFATVAAIEGLHKIRTGQLV 190

Query: 164 SLSEQQVLDCSG--SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKA 221
           SLSEQ+VLDCS   + GC+GG    A  ++  + GLT E  YPY+ R+G C   +     
Sbjct: 191 SLSEQEVLDCSSPPNNGCHGGNPAAAIDWVSANGGLTTESDYPYEGRQGKCKLDKARNHV 250

Query: 222 ARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCG-NNLNHAVTI 279
           A+IR  + V   +E AL  AV++QPV+V ++   P  ++Y  GVF GPC   +LNHAVT+
Sbjct: 251 AKIRGRKLVDQNNEAALEVAVAQQPVAVGMNV-HPIQQHYKSGVFHGPCDPEDLNHAVTM 309

Query: 280 VGYGSSNEG-PYWLIKNSWGQNWGEGGFIR 308
           VGYG+ + G  YW++KNSWG+ WGE G+ R
Sbjct: 310 VGYGAESGGRKYWIVKNSWGEKWGEKGYFR 339


>gi|13928758|ref|NP_113748.1| cathepsin K precursor [Rattus norvegicus]
 gi|12585195|sp|O35186.1|CATK_RAT RecName: Full=Cathepsin K; Flags: Precursor
 gi|2305208|gb|AAB65743.1| cathepsin K [Rattus norvegicus]
 gi|50927597|gb|AAH78793.1| Cathepsin K [Rattus norvegicus]
 gi|149030667|gb|EDL85704.1| cathepsin K, isoform CRA_a [Rattus norvegicus]
          Length = 329

 Score =  238 bits (606), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 197/318 (61%), Gaps = 17/318 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEF 75
           E+++  + ELW     + Y ++ ++  R  I++KN + I   N E   G  TY+L++N  
Sbjct: 19  EETLDTQWELWKKTHGKQYNSKVDEISRRLIWEKNLKKISVHNLEASLGAHTYELAMNHL 78

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
            D+T EE +   TG ++P       S+S++N+    P+    +P SID+R +G VTPVKN
Sbjct: 79  GDMTSEEVVQKMTGLRVPP------SRSFSNDTLYTPEWEGRVPDSIDYRKKGYVTPVKN 132

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYIIRS 194
           QG CG CW FS+  A+EG  K +TG+L++LS Q ++DC S + GC GG+M  AF Y+ ++
Sbjct: 133 QGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVSENYGCGGGYMTTAFQYVQQN 192

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVAIDA 252
            G+  E  YPY  ++  C +   A KAA+ R Y+++P  +E AL+ AV+R  PVSV+IDA
Sbjct: 193 GGIDSEDAYPYVGQDESCMYNATA-KAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDA 251

Query: 253 SSPGFRYYSGGVFAGP-CG-NNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMR 310
           S   F++YS GV+    C  +N+NHAV +VGYG+     YW+IKNSWG++WG  G++ + 
Sbjct: 252 SLTSFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQKGNKYWIIKNSWGESWGNKGYVLLA 311

Query: 311 RDVGGAGLCGIARKASYP 328
           R+   A  CGI   AS+P
Sbjct: 312 RNKNNA--CGITNLASFP 327


>gi|223946391|gb|ACN27279.1| unknown [Zea mays]
          Length = 279

 Score =  238 bits (606), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 126/260 (48%), Positives = 165/260 (63%), Gaps = 11/260 (4%)

Query: 78  LTDEEFIASHTGYKMPTRNI---SNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVK 134
           +T +EF   + G ++    +     Q  S + + F Y D+R  +P S+DWR +GAVT VK
Sbjct: 1   MTADEFRRHYAGSRVAHHRMFRGDRQGSSASASSFMYADARD-VPASVDWRQKGAVTDVK 59

Query: 135 NQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--GSRGCYGGWMDDAFSYII 192
           +QG CG CW FS +AAVEGI  I+T  L SLSEQQ++DC    + GC GG MD AF YI 
Sbjct: 60  DQGQCGSCWAFSTIAAVEGINAIKTKNLTSLSEQQLVDCDTKANAGCNGGLMDYAFQYIA 119

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAID 251
           +  G+  E  YPY+ R+  C  ++       I  Y+DVP + E AL+ AV+ QPVSVAI+
Sbjct: 120 KHGGVAAEDAYPYRARQASC--KKSPAPVVTIDGYEDVPANDESALKKAVAHQPVSVAIE 177

Query: 252 ASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMR 310
           AS   F++YS GVF+G CG  L+H V  VGYG + +G  YWL+KNSWG  WGE G+IRM 
Sbjct: 178 ASGSHFQFYSEGVFSGRCGTELDHGVAAVGYGVTADGTKYWLVKNSWGPEWGEKGYIRMA 237

Query: 311 RDVGG-AGLCGIARKASYPI 329
           RDV    G CGIA +ASYP+
Sbjct: 238 RDVAAKEGHCGIAMEASYPV 257


>gi|157829826|pdb|1AEC|A Chain A, Crystal Structure Of Actinidin-E-64 Complex+
          Length = 218

 Score =  238 bits (606), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 113/216 (52%), Positives = 149/216 (68%), Gaps = 4/216 (1%)

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           LP  +DWR+ GAV  +K+QG CG CW FSA+A VEGI KI TG LISLSEQ+++DC    
Sbjct: 1   LPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQ 60

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TS 233
            +RGC GG++ D F +II + G+  E  YPY  ++G CN      K   I +Y++VP  +
Sbjct: 61  NTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNVDLQNEKYVTIDTYENVPYNN 120

Query: 234 ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLI 293
           E AL+ AV+ QPVSVA+DA+   F+ YS G+F GPCG  ++HAVTIVGYG+     YW++
Sbjct: 121 EWALQTAVTYQPVSVALDAAGDAFKQYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDYWIV 180

Query: 294 KNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           KNSW   WGE G++R+ R+VGGAG CGIA   SYP+
Sbjct: 181 KNSWDTTWGEEGYMRILRNVGGAGTCGIATMPSYPV 216


>gi|18202415|sp|P82474.1|CPGP2_ZINOF RecName: Full=Zingipain-2; AltName: Full=Cysteine proteinase GP-II
 gi|6137410|pdb|1CQD|A Chain A, The 2.1 Angstrom Structure Of A Cysteine Protease With
           Proline Specificity From Ginger Rhizome, Zingiber
           Officinale
 gi|6137411|pdb|1CQD|B Chain B, The 2.1 Angstrom Structure Of A Cysteine Protease With
           Proline Specificity From Ginger Rhizome, Zingiber
           Officinale
 gi|6137412|pdb|1CQD|C Chain C, The 2.1 Angstrom Structure Of A Cysteine Protease With
           Proline Specificity From Ginger Rhizome, Zingiber
           Officinale
 gi|6137413|pdb|1CQD|D Chain D, The 2.1 Angstrom Structure Of A Cysteine Protease With
           Proline Specificity From Ginger Rhizome, Zingiber
           Officinale
          Length = 221

 Score =  238 bits (606), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 114/215 (53%), Positives = 151/215 (70%), Gaps = 4/215 (1%)

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-GS 176
           LP SIDWR  GAV PVKNQG CG CW FS VAAVEGI +I TG LISLSEQQ++DC+  +
Sbjct: 3   LPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTAN 62

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SEL 235
            GC GGWM+ AF +I+ + G+  E  YPY+ ++G CN    A     I SY++VP+ +E 
Sbjct: 63  HGCRGGWMNPAFQFIVNNGGINSEETYPYRGQDGICNSTVNA-PVVSIDSYENVPSHNEQ 121

Query: 236 ALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKN 295
           +L+ AV+ QPVSV +DA+   F+ Y  G+F G C  + NHA+T+VGYG+ N+  +W++KN
Sbjct: 122 SLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNISANHALTVVGYGTENDKDFWIVKN 181

Query: 296 SWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPI 329
           SWG+NWGE G+IR  R++    G CGI R ASYP+
Sbjct: 182 SWGKNWGESGYIRAERNIENPDGKCGITRFASYPV 216


>gi|326493706|dbj|BAJ85314.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 365

 Score =  238 bits (606), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 137/339 (40%), Positives = 195/339 (57%), Gaps = 37/339 (10%)

Query: 17  LHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE------------- 63
           L E  +  +   WM + ++ Y  + E+ MRF++FK N   I + +R+             
Sbjct: 39  LPESEVRERFSKWMIKYSKHYSCKQEEEMRFQVFKNNTNSIGQLDRQNPNPGVGGALGPS 98

Query: 64  GNQTY---KLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           G+Q +   K+S+N F DL+  E I  +TG  + T +    S +Y      Y   +   P 
Sbjct: 99  GSQVHTFQKVSMNRFGDLSPREVIQQYTG--LNTTSFRTASPTY----LPYHSFK---PC 149

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGC 179
            +DWR+ GAVT VK+QG+CG CW F+AVAA+EG+ KIRTG L+SLSEQ ++DC + S GC
Sbjct: 150 CVDWRSSGAVTGVKHQGTCGSCWAFAAVAAIEGMNKIRTGELVSLSEQVLVDCDTVSTGC 209

Query: 180 YGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAM-KAARIRSYQDVPT-SELAL 237
            GG  D A + +    G+T E  YPY   +G C+  +      A I+ ++ VP+ +E  L
Sbjct: 210 GGGHSDSAMALVAARGGITSEERYPYAGFQGKCDVDKLMFDHQASIKGFKAVPSNNEAQL 269

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-----YWL 292
             AV+ QPV+V IDAS   F++YSGG++ GPC  N+NHAVTIVGY    EGP     YW+
Sbjct: 270 AIAVAMQPVTVYIDASGSAFQFYSGGIYRGPCSANVNHAVTIVGY---CEGPGEGNKYWI 326

Query: 293 IKNSWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPIA 330
            KNSW  +WGE G++ + +DV    G CG+A    YP A
Sbjct: 327 AKNSWSNDWGEQGYVYLAKDVAWSTGTCGLATSPFYPTA 365


>gi|355681664|gb|AER96818.1| cathepsin S [Mustela putorius furo]
          Length = 338

 Score =  237 bits (605), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 135/330 (40%), Positives = 194/330 (58%), Gaps = 21/330 (6%)

Query: 9   ASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GN 65
           +S  +++  ++ ++     LW     R Y+ + E+  R  I++KN + +   N E   G 
Sbjct: 19  SSYAVAQVQNDPTLDHHWNLWKKTYGRQYQEKNEEVARRLIWEKNLKSVMLHNLEYSMGM 78

Query: 66  QTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWR 125
            +Y L +N  AD+T EE  +  +  ++P++  +N +  Y +N      S + LP S+DWR
Sbjct: 79  HSYDLGMNHLADMTSEEVSSLMSSLRVPSQWQANVT--YKSN------SNQKLPDSVDWR 130

Query: 126 ARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS----GSRGCYG 181
            +G VT VK QG+CG CW FSAV A+E   K++TG L+SLS Q ++DCS    G++GC G
Sbjct: 131 EKGCVTEVKYQGACGACWAFSAVGALEAQLKLKTGNLVSLSAQNLVDCSTERYGNKGCNG 190

Query: 182 GWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYA 240
           G+M  AF YII + G+  E  YPY+  +G C +     +AA    Y ++P  SE AL+ A
Sbjct: 191 GFMTKAFQYIIDNNGIDSEVSYPYKAMDGNCRYD-SKHRAATCSKYTELPFGSEDALKEA 249

Query: 241 VSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPYWLIKNSWG 298
           V+ + PVSVAIDA    F  Y  GV+  P C  N+NH V +VGYG+ N   YWL+KNSWG
Sbjct: 250 VANKGPVSVAIDAKHSSFFLYKSGVYYDPSCTQNVNHGVLVVGYGNLNGRDYWLVKNSWG 309

Query: 299 QNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
            N+GE G+IRM R+ G    CGIA   SYP
Sbjct: 310 LNFGEQGYIRMARNSGNH--CGIASYPSYP 337


>gi|91085677|ref|XP_971867.1| PREDICTED: similar to cathepsin L-like protein; cysteine proteinase
           [Tribolium castaneum]
 gi|270011032|gb|EFA07480.1| cathepsin L precursor [Tribolium castaneum]
          Length = 329

 Score =  237 bits (605), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 186/321 (57%), Gaps = 12/321 (3%)

Query: 16  TLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSL 72
           T    S++ K E +  +  R +    E+  R  +F+K  + IE  N   R+G +TY++ +
Sbjct: 13  TSDASSLNEKWENFKQKHGRNFLFSKEEFFRKSLFQKKLQEIEDHNERYRKGLETYEMGI 72

Query: 73  NEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTP 132
           N+F+D TD+E  +   G ++P+       +   N       SR GLP S DWR+RG +TP
Sbjct: 73  NKFSDYTDDELFSYTHGLQLPSELPEPIIKISPNATLSL--SRAGLPSSFDWRSRGVITP 130

Query: 133 VKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYI 191
           VKNQ +CG CW FS   A+E   KIR G +++LSEQQ++DC   + GC GGWM DA+ YI
Sbjct: 131 VKNQRNCGSCWAFSTNGALEAHYKIRRGSVVTLSEQQLVDCVRQAFGCRGGWMTDAYMYI 190

Query: 192 IRSQGLTDERVYPYQRREGYCNWQRGAMKAA-RIRSYQDVPTSELALRYAVSRQPVSVAI 250
            R+ G+  +R YPY+   G C +Q    K   R  +Y   P  E+     V++ PVSVAI
Sbjct: 191 ARNGGINLDRNYPYKASAGPCRFQASKPKVTIRGYAYLTGPNEEMLKHMVVTQGPVSVAI 250

Query: 251 DASSPGFRYYSGGVFAGP-CG-NNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIR 308
           DAS   F  Y GGV+  P C  N   HAV IVGYG  N   YWL+KNSWG++WG GG+I+
Sbjct: 251 DASGR-FASYGGGVYYNPSCARNKFTHAVVIVGYGRENGQDYWLVKNSWGRDWGLGGYIK 309

Query: 309 MRRDVGGAGLCGIARKASYPI 329
           M R+      CGIA KASYP+
Sbjct: 310 MARNRNNH--CGIASKASYPV 328


>gi|139947602|ref|NP_001077155.1| cathepsin L1 precursor [Bos taurus]
 gi|134025180|gb|AAI34742.1| CTSL1 protein [Bos taurus]
 gi|296484500|tpg|DAA26615.1| TPA: cathepsin L1 [Bos taurus]
          Length = 333

 Score =  237 bits (604), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 128/323 (39%), Positives = 192/323 (59%), Gaps = 26/323 (8%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEF 75
           + S+  + +LW A   + Y +  E+  R  ++KKN + IE  N+E   G  ++ +++N F
Sbjct: 22  DHSLDTQWKLWKAAHRKPY-DLNEEGWRKAVWKKNMKMIELHNQEYSQGKHSFSMAMNAF 80

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
            D+T+EEF  +  G++   R  + + + +    F        +P S+DWR +G VTPVKN
Sbjct: 81  GDMTNEEFRHTMNGFQ---RQKNKKGKEFHETIFA------SIPPSVDWREKGYVTPVKN 131

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYII 192
           QG CG CW FSA  A+EG    +TG+L+SLSEQ ++DCS   G+RGC+GG++D+AF Y++
Sbjct: 132 QGKCGSCWAFSATGALEGQMFQKTGKLVSLSEQNLVDCSQPEGNRGCHGGFIDNAFQYVL 191

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQ-PVSVAID 251
              GL  E  YPY    G C +      AA    + D+P  E AL  AV+   P+SVA+D
Sbjct: 192 DVGGLDSEESYPYTGLVGTCLYNPNN-SAANETGFVDLPKQEKALMKAVANLGPISVAVD 250

Query: 252 ASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYG----SSNEGPYWLIKNSWGQNWGEGG 305
           A +P F++Y  G++  P     +++HAV +VGYG     S++  YWL+KNSWG++WG  G
Sbjct: 251 AHNPSFQFYKSGIYYEPNCSSESVDHAVLVVGYGFEGADSDDNKYWLVKNSWGEHWGMNG 310

Query: 306 FIRMRRDVGGAGLCGIARKASYP 328
           +I+M +D      CGIA  ASYP
Sbjct: 311 YIKMAKDRNNH--CGIATMASYP 331


>gi|427797099|gb|JAA64001.1| Putative cathepsin l cathepsin l, partial [Rhipicephalus
           pulchellus]
          Length = 331

 Score =  237 bits (604), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 130/325 (40%), Positives = 193/325 (59%), Gaps = 20/325 (6%)

Query: 18  HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNE 74
           HE+ + A+   + A   + Y++  E+  R KI+ +N   I + N +      +YKL++NE
Sbjct: 15  HEELVGAEWSAFKALHGKEYESDTEEYYRLKIYMENRLKIARHNEKYAKSQVSYKLAMNE 74

Query: 75  FADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG--LPRSIDWRARGAVTP 132
           F D+   EF+++  G+K   R+   +      ++F  P+      LP+++DWR +GAVTP
Sbjct: 75  FGDMLHHEFVSTRNGFKRNYRDTPREG-----SFFVEPEGLEDFHLPKTVDWRKKGAVTP 129

Query: 133 VKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFS 189
           VKNQG CG CW FS   ++EG    +  +L+SLSEQ ++DCS   G+ GC GG MD AF 
Sbjct: 130 VKNQGQCGSCWSFSTTGSLEGQHFRKLHKLVSLSEQNLIDCSRSFGNNGCEGGLMDYAFK 189

Query: 190 YIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR-QPVS 247
           YI  ++G+  E+ YPY   +G C++ + A+ A     + D+P   E  L+ AV+   PVS
Sbjct: 190 YIKANKGIDTEQSYPYNATDGVCHFNKSAVGATDT-GFVDIPEGDENKLKKAVATVGPVS 248

Query: 248 VAIDASSPGFRYYSGGVFAGP-CGNN-LNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGG 305
           VAIDAS   F++YS GV+  P C +  L+H V +VGYG+ +   YWL+KNSWG  WG+GG
Sbjct: 249 VAIDASHESFQFYSEGVYDEPECDSEQLDHGVLVVGYGTKDGQDYWLVKNSWGTTWGDGG 308

Query: 306 FIRMRRDVGGAGLCGIARKASYPIA 330
           +I M R+      CGIA  ASYP+ 
Sbjct: 309 YIYMSRNKDNQ--CGIASAASYPLV 331


>gi|125606653|gb|EAZ45689.1| hypothetical protein OsJ_30362 [Oryza sativa Japonica Group]
          Length = 359

 Score =  237 bits (604), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 135/318 (42%), Positives = 180/318 (56%), Gaps = 13/318 (4%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADL 78
           E+S+ + ++ W      T ++ AEK  RF+ FK N R + +FN++   TYKL+LN FAD+
Sbjct: 23  EESMWSLYQRWSRVHGLTSRDLAEKQGRFEAFKANARHVNEFNKKEGMTYKLALNRFADM 82

Query: 79  TDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGS 138
           T +EF+A    Y     + +  + +              +P S DWR  GAVT VK+Q  
Sbjct: 83  TLQEFVAK---YAGAKVDAAAAALASVAEVEEEELVVGDVPASWDWREHGAVTAVKDQDG 139

Query: 139 CGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRGCYGGWMDDAFSYIIRSQGLT 198
           CG CW FSAV AVE I  I TG L++LSEQQVLDCSG   C GGW +   S     QG+ 
Sbjct: 140 CGSCWAFSAVGAVESINAIATGNLLTLSEQQVLDCSGDGDCNGGWPNLVLSGYAVEQGIA 199

Query: 199 DERV------YPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDA 252
            + +       PY  ++  C    G     +      V +SE AL+ +V  QPVSV I+A
Sbjct: 200 LDNIGDPAYYPPYVAKKMACRTVAGK-PVVKTDGTLQVASSETALKQSVYGQPVSVLIEA 258

Query: 253 SSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSS-NEGPYWLIKNSWGQNWGEGGFIRMRR 311
            +  F+ Y  GV++GPCG  +NHAV  VGYG + N   YW++KNSW   WGE G+IRM+R
Sbjct: 259 DT-NFQLYKSGVYSGPCGTRINHAVLAVGYGVTLNNTKYWIVKNSWNTTWGESGYIRMKR 317

Query: 312 DVGG-AGLCGIARKASYP 328
           DVGG  GLCGIA    YP
Sbjct: 318 DVGGNKGLCGIAMYGIYP 335


>gi|162463334|ref|NP_001104878.1| maize insect resistance2 precursor [Zea mays]
 gi|2425064|gb|AAB88262.1| cysteine proteinase Mir2 [Zea mays]
          Length = 493

 Score =  237 bits (604), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 128/291 (43%), Positives = 177/291 (60%), Gaps = 10/291 (3%)

Query: 46  RFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQ 102
           R ++F+ N R+I+  N E   G   ++L L  FADLT EE+ A      + +R  +  + 
Sbjct: 92  RLEVFRDNLRYIDAHNAEADAGLHGFRLGLTRFADLTLEEYRAR---LLLGSRGRNGTAV 148

Query: 103 SYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRL 162
                    P +   LP ++DWR RGAV  VK+QG CG CW FSAVAAVEGI KI TG L
Sbjct: 149 GVVGRRRYLPLAGEQLPDAVDWRERGAVAEVKDQGQCGGCWAFSAVAAVEGINKIVTGSL 208

Query: 163 ISLSEQQVLDCSG--SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMK 220
           ISLSEQ+++DC     +GC GG MD+AF ++I++ G+  E  YP+   +G C+ +    +
Sbjct: 209 ISLSEQELIDCDKFQDQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTCDLKLKNTR 268

Query: 221 AARIRSYQDVPTS-ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTI 279
              I S++ VP + E AL+ AV+ QPVS +I+AS   F+ YS G+F G CG  L+H VT+
Sbjct: 269 VVSIDSFERVPINYERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTV 328

Query: 280 VGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPI 329
           VGYGS     YW++KNSWG  WGE G++RM R+V       GIA +  YP+
Sbjct: 329 VGYGSEGGKDYWIVKNSWGTQWGEAGYVRMARNVRVRPPSAGIAMEPLYPV 379


>gi|356517384|ref|XP_003527367.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
          Length = 332

 Score =  236 bits (603), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 138/339 (40%), Positives = 190/339 (56%), Gaps = 29/339 (8%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           ML+ M   A  V  RTL + S+   H   M + ++  K+  +      +FK+N  +IE  
Sbjct: 14  MLLSMAFLAFQVTCRTLQDASMYESHGQRMTRYSKVDKDPPDX-----VFKENVNYIEAC 68

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N   ++ YK  +N+FA     +     +  ++ T    N + +               P 
Sbjct: 69  NNAADKPYKRDINQFAPKKRFKGHMCSSIIRITTFKFENVTAT---------------PS 113

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLS-EQQVLDCSG---S 176
           ++D R + AVTP+K+QG CGC W  SAVAA EGI  +  G+LI LS EQ+++DC      
Sbjct: 114 TVDCRQKVAVTPIKDQGQCGCFWALSAVAATEGIHALXAGKLILLSSEQELVDCDTKGVD 173

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRS-YQDVPTS-- 233
           + C GG MDDAF +II++ GL  E  YPY+  +G CN       AA I + Y+DVP +  
Sbjct: 174 QDCQGGLMDDAFKFIIQNHGLNTEANYPYKGVDGKCNAYEADKNAATIITGYEDVPANNE 233

Query: 234 ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWL 292
           +  L+ AV+  PVSVAIDAS   F++Y  GVF G CG  L+H VT VGYG S++G  YWL
Sbjct: 234 KAHLQKAVANNPVSVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGVSDDGTEYWL 293

Query: 293 IKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           +KNS G  WGE G+IRM+R V     LCGIA +ASYP A
Sbjct: 294 VKNSRGTEWGEEGYIRMQRGVDSEEALCGIAVQASYPSA 332


>gi|330805273|ref|XP_003290609.1| hypothetical protein DICPUDRAFT_92519 [Dictyostelium purpureum]
 gi|325079248|gb|EGC32857.1| hypothetical protein DICPUDRAFT_92519 [Dictyostelium purpureum]
          Length = 333

 Score =  236 bits (603), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 132/308 (42%), Positives = 187/308 (60%), Gaps = 17/308 (5%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           WM +  R Y ++ E   R++ FK+N  FI K+N + + T  L L +FADLT+EE+   + 
Sbjct: 36  WMRKHDRAYSHE-EFTDRYQAFKENMDFIHKWNSQESDTV-LGLTKFADLTNEEYKKHYL 93

Query: 89  GYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAV 148
           G K+  +   N +Q       G    +   P SIDWR +GAV+ VK+QG CG CW FS  
Sbjct: 94  GIKVNVKKNLNAAQK------GLKFFKFTGPDSIDWREKGAVSQVKDQGQCGSCWSFSTT 147

Query: 149 AAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPY 205
            AVEG  +I++G ++SLSEQ ++DCS   G++GC GG M +AF YII + G+  E  YPY
Sbjct: 148 GAVEGAHQIKSGNMVSLSEQNLVDCSGQYGNQGCEGGLMVNAFEYIIDNGGIATESSYPY 207

Query: 206 QRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSGGV 264
              +G C + + +M  A I  Y+++P   E +L  A+++QPVSVAIDAS   F+ YS GV
Sbjct: 208 TAAQGRCKFTK-SMNGANIIGYKEIPQGEEDSLTAALAKQPVSVAIDASHMSFQLYSSGV 266

Query: 265 FAGP-CGNN-LNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIA 322
           +  P C +  L+H V  VGYG+     Y++IKNSWG  WG+ G+I M R+      CG+A
Sbjct: 267 YDEPACSSEALDHGVLAVGYGTLEGKDYYIIKNSWGPTWGQDGYIFMSRNA--QNQCGVA 324

Query: 323 RKASYPIA 330
             ASYPI+
Sbjct: 325 TMASYPIS 332


>gi|356545079|ref|XP_003540973.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
          Length = 330

 Score =  236 bits (603), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 132/304 (43%), Positives = 178/304 (58%), Gaps = 21/304 (6%)

Query: 5   MVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREG 64
           M   AS V  RTL + S+  +HE WM++  + YK+  E+  RF+IFK+N  +IE  N   
Sbjct: 1   MAFLASQVTCRTLQDASMYERHEEWMSRYGKVYKDPREREKRFRIFKENMNYIETSNNVA 60

Query: 65  NQTYKLSLNEFADLTDEEFIASHTGYK--MPTRNISNQSQSYANNWFGYPDSRRGLPRSI 122
            +  KL +N+FADL +EEFIA    +K  +  R +S +      + F +P    G     
Sbjct: 61  IKPXKLVINQFADLNNEEFIAPRNIFKGMILCRFLSRK------HTFPFPYVFLG----- 109

Query: 123 DWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGC 179
               +GAVTPVK+QG CG CW F  VA+ EGI  +  G+LISLSEQ+++DC      +GC
Sbjct: 110 --HKKGAVTPVKDQGHCGFCWAFYDVASTEGILALTAGKLISLSEQELVDCDTKGVDQGC 167

Query: 180 YGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALR 238
             G MDDAF +II++ G+ D   YPY+  +G CN    A  AA I   +DVP  +E AL+
Sbjct: 168 ECGLMDDAFKFIIQNHGVXDAN-YPYKGVDGKCNANEEANPAATITGXEDVPANNEKALQ 226

Query: 239 YAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSW 297
             V+ QPV VAIDA    F++Y  GVF G C   LNH VT +GYG S++G  YWL+KNS 
Sbjct: 227 KVVANQPVFVAIDACDSDFQFYKSGVFTGSCETELNHGVTTMGYGVSHDGTQYWLVKNSX 286

Query: 298 GQNW 301
              W
Sbjct: 287 ETEW 290


>gi|32396018|gb|AAP41846.1| cysteine protease [Anthurium andraeanum]
          Length = 502

 Score =  236 bits (603), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 132/312 (42%), Positives = 183/312 (58%), Gaps = 11/312 (3%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYK----LSLNEFADLTDEE 82
           E WM +  + Y +  EKA R+  F  N  F+ K N EG +       + +N FADL++EE
Sbjct: 52  ERWMEKHRKVYAHPGEKARRYANFLSNLAFVRKRNAEGRRAPSSGQGVGMNVFADLSNEE 111

Query: 83  FIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCC 142
           F   ++  ++  +  +    +      G   +    P S+DWR RGAVT VKNQG CG C
Sbjct: 112 FREVYSS-RVLRKKAAEGRGARRRAGEGRVVAGCDAPASLDWRKRGAVTAVKNQGDCGSC 170

Query: 143 WIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYIIRSQGLTDER 201
           W FS+  A+EGI  I TG LISLSEQ+++DC + + GC GG+MD AF ++I + G+  E 
Sbjct: 171 WAFSSTGAMEGINAITTGELISLSEQELVDCDTTNEGCDGGYMDYAFEWVINNGGIDSEA 230

Query: 202 VYPYQ-RREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGFRYY 260
            YPY  + +  CN  +  +K   I  Y+DV TSE AL  A  +QPVSV ID SS  F+ Y
Sbjct: 231 NYPYTGQADSVCNTTKEEIKVVSIDGYEDVATSESALLCAAVQQPVSVGIDGSSLDFQLY 290

Query: 261 SGGVFAGPCGNN---LNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA- 316
           +GG++ G C  N   ++HAV +VGYG      YW++KNSWG +WG  G+I +RR+ G   
Sbjct: 291 AGGIYDGDCSGNPDDIDHAVLVVGYGQQGGTDYWIVKNSWGTDWGMQGYIYIRRNTGLPY 350

Query: 317 GLCGIARKASYP 328
           G+C I   ASYP
Sbjct: 351 GVCAIDAMASYP 362


>gi|139002720|dbj|BAF51966.1| cathepsin K [Carassius auratus]
 gi|139002725|dbj|BAF51967.1| tartrate-resistant acid phosphatase [Carassius auratus]
          Length = 332

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 134/326 (41%), Positives = 193/326 (59%), Gaps = 20/326 (6%)

Query: 13  MSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYK 69
           ++RTL   ++    E W     R Y    E+++R  I++KN  FIE  N+E   G  TY 
Sbjct: 17  LARTLENLTLDEAWEGWKLTHKREYNGLDEESIRRAIWEKNMLFIEAHNKEYELGIHTYN 76

Query: 70  LSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGA 129
           L +N F D+T EE      G +MP     +Q+ ++       PD   GLP+SID+R  G 
Sbjct: 77  LGMNHFGDMTLEEVAEKVMGLQMPM--YQDQTNTFM------PDDTVGLPKSIDYRKLGY 128

Query: 130 VTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAF 188
           VT VKNQGSCG CW FS+V A+EG  K   G+L+ LS Q ++DC + + GC GG+M +AF
Sbjct: 129 VTSVKNQGSCGSCWAFSSVGALEGQLKKTKGQLVDLSPQNLVDCVTDNDGCGGGYMTNAF 188

Query: 189 SYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PV 246
            Y+  +QG+  E  YPY   +  C +   A +AA  + ++++P  +E AL  AV++  PV
Sbjct: 189 RYVKDNQGIDSEEGYPYVGTDQQCAYNSSA-RAATCKGFKEIPQGNEKALTAAVAKVGPV 247

Query: 247 SVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGE 303
           SV IDA    F YY  GV+  P  N  ++NHAV  VGYG++ +G  YW++KNSWG++WG+
Sbjct: 248 SVGIDAMQSTFLYYKSGVYYDPNCNKDDVNHAVLAVGYGATPKGKKYWIVKNSWGEDWGK 307

Query: 304 GGFIRMRRDVGGAGLCGIARKASYPI 329
            G++ M R+   A  CGIA  AS+P+
Sbjct: 308 KGYVLMARNRNNA--CGIASLASFPV 331


>gi|224116880|ref|XP_002317417.1| predicted protein [Populus trichocarpa]
 gi|118488173|gb|ABK95906.1| unknown [Populus trichocarpa]
 gi|222860482|gb|EEE98029.1| predicted protein [Populus trichocarpa]
          Length = 498

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 127/325 (39%), Positives = 182/325 (56%), Gaps = 17/325 (5%)

Query: 13  MSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN--REGNQTYKL 70
           +   L E+ I+   +LW  +  + YK+  E   R   FK+N ++I + N  R+    +K+
Sbjct: 37  LHEGLTEEGITEVFKLWKEKHQKVYKHAEEAERRIGNFKRNLKYIIEKNGKRKSGLEHKV 96

Query: 71  SLNEFADLTDEEFIASH-TGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGA 129
            LN+FADL++EEF   + +  K P      +   +              P S+DWR +G 
Sbjct: 97  GLNKFADLSNEEFREMYLSKVKKPITIEEKRKHRHLQTC--------DAPSSLDWRNKGV 148

Query: 130 VTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR--GCYGGWMDDA 187
           VT VK+QG CG CW FS   A+E I  I TG LISLSEQ+++DC  +   GC GG MD A
Sbjct: 149 VTAVKDQGDCGSCWSFSTTGAIEAINAIVTGDLISLSEQELVDCDTTNNYGCEGGDMDSA 208

Query: 188 FSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVS 247
           F ++I + G+  E  YPY   +G CN  +   K   I  Y DV  S+ AL  A  +QP+S
Sbjct: 209 FQWVIGNGGIDTEADYPYTGVDGTCNTAKEEKKVVSIEGYVDVDPSDSALLCATVQQPIS 268

Query: 248 VAIDASSPGFRYYSGGVFAGPCG---NNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEG 304
           V +D S+  F+ Y+GG++ G C    N+++HA+ IVGYGS N+  YW++KNSWG  WG  
Sbjct: 269 VGMDGSALDFQLYTGGIYDGDCSGDPNDIDHAILIVGYGSENDEDYWIVKNSWGTEWGME 328

Query: 305 GFIRMRRDVGGA-GLCGIARKASYP 328
           G+  +RR+     G+C I   ASYP
Sbjct: 329 GYFYIRRNTSKPYGVCAINADASYP 353


>gi|28194647|gb|AAO33585.1|AF479267_1 cathepsin L [Mesocricetus auratus]
          Length = 333

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/323 (40%), Positives = 184/323 (56%), Gaps = 26/323 (8%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEFAD 77
           + +A+   W +   R Y    E+  R  +++KN + IE  N    EG   + + +N F D
Sbjct: 24  TFNAQWHKWKSTHRRLYDTNEEEWRR-AVWEKNMKMIELHNGEYSEGKHGFTMEMNAFGD 82

Query: 78  LTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQG 137
           +T+EEF     GYK          +      F  P   + LP+S+DWR +G VTPVKNQG
Sbjct: 83  MTNEEFRQLVNGYK--------HQKHRKGKLFQEPLMLQ-LPKSVDWREKGCVTPVKNQG 133

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRS 194
            CG CW FSA  A+EG   ++TG L+SLSEQ ++DCS   G++GC GG MD AF Y++ +
Sbjct: 134 QCGSCWAFSACGALEGQMCLKTGVLVSLSEQNLVDCSRGEGNQGCNGGLMDFAFQYVLNN 193

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSR-QPVSVAIDAS 253
           +GL  E  YPY+ ++G C + +    AA    Y D+P  E AL  AV+   P++VAIDAS
Sbjct: 194 KGLDSEESYPYEAKDGTCKY-KPEFAAANDTGYVDIPQLEKALMKAVATVGPIAVAIDAS 252

Query: 254 SPGFRYYSGGVFAGP--CGNNLNHAVTIVGYG----SSNEGPYWLIKNSWGQNWGEGGFI 307
            P F++YS G++  P     +L+H V ++GYG     SN+  YW++KNSWG  WG GGF 
Sbjct: 253 HPSFQFYSSGIYFEPNCSSKDLDHGVLVIGYGFEGTDSNKKKYWIVKNSWGTGWGMGGFF 312

Query: 308 RMRRDVGGAGLCGIARKASYPIA 330
            + +D      CGIA  ASYP  
Sbjct: 313 HIAKDKNNH--CGIATAASYPTV 333


>gi|194719810|emb|CAR31335.1| pro-asclepain f [Gomphocarpus fruticosus subsp. fruticosus]
          Length = 340

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 133/336 (39%), Positives = 206/336 (61%), Gaps = 13/336 (3%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK-- 59
            ++ V+  + + +    +D + A +E W+ +  + Y +  EK  RF+IFK N R+I++  
Sbjct: 10  FLLFVSAITCISTNWRSDDEVIALYEEWLVKHQKLYSSLGEKIKRFEIFKDNLRYIDQQN 69

Query: 60  -FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNI--SNQSQSYANNWFGYPDSRR 116
            +N+  +  + L LN+FADLT +EF + + G  +    I  SN +           D   
Sbjct: 70  HYNKVNHMNFTLGLNQFADLTLDEFSSIYLGTSVDYEQIISSNPNHDDVEEDILKEDVVE 129

Query: 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG- 175
            LP S+DWR +G V P++NQG CG CW FSAVA++E +  I+ G +I+LSEQ++LDC   
Sbjct: 130 -LPDSVDWREKGVVFPIRNQGKCGSCWTFSAVASIETLNGIKKGHMIALSEQELLDCETI 188

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSEL 235
           S+GC GG  ++AF+Y+ ++ G+T E  YPY  R+G C +Q+   K  +I  Y+ VP +  
Sbjct: 189 SQGCKGGHYNNAFAYVAKN-GITSEEKYPYIFRQGQC-YQK--EKVVKISGYKRVPRNNG 244

Query: 236 A-LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIK 294
             L+ AV++Q VSVA+   S  F++Y  G+F+G CG  L+HAV IVGYGS     YW+++
Sbjct: 245 GQLQSAVAQQVVSVAVKCESKDFQFYDRGIFSGACGPILDHAVNIVGYGSKGGANYWIMR 304

Query: 295 NSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
           NSWG NWGE G++R++++     G CGIA + SYP+
Sbjct: 305 NSWGTNWGENGYMRIQKNSKHYEGHCGIAMQPSYPV 340


>gi|3850787|emb|CAA05360.1| cathepsin S [Mus musculus]
          Length = 330

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/314 (41%), Positives = 190/314 (60%), Gaps = 24/314 (7%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEF 83
           +LW     + YK++ E+ +R  I++KN +FI   N E   G  TY++ +N+  D+T+EE 
Sbjct: 27  DLWKKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEEI 86

Query: 84  IASHTGYKMPTRNISNQS-QSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCC 142
           +      ++P ++    + +SY+N         R LP ++DWR +G VT VK QGSCG C
Sbjct: 87  LCRMGALRIPRQSPKTVTFRSYSN---------RTLPDTVDWREKGCVTEVKYQGSCGAC 137

Query: 143 WIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-----GSRGCYGGWMDDAFSYIIRSQGL 197
           W FSAV A+EG  K++TG+LISLS Q ++DCS     G++GC GG+M +AF YII + G+
Sbjct: 138 WAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGI 197

Query: 198 TDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAV-SRQPVSVAIDASSP 255
             +  YPY+  +  C++     +AA    Y  +P   E AL+ AV ++ PVSV IDAS  
Sbjct: 198 EADASYPYKAMDEKCHYNS-KNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHS 256

Query: 256 GFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG 314
            F +Y  GV+  P C  N+NH V +VGYG+ +   YWL+KNSWG N+G+ G+IRM R+  
Sbjct: 257 SFFFYKSGVYDDPSCTGNVNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARN-- 314

Query: 315 GAGLCGIARKASYP 328
               CGIA   SYP
Sbjct: 315 NKNHCGIASYCSYP 328


>gi|388890776|gb|AFK80364.1| cysteine proteinase 3, partial [Acanthamoeba castellanii]
          Length = 329

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 138/337 (40%), Positives = 195/337 (57%), Gaps = 19/337 (5%)

Query: 2   LIIMVTWASLVMSRTL--HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           + I+V  A++ ++ TL    D ++     WM  ++++Y N+ E   R+ ++++N + IE+
Sbjct: 4   ITILVLLAAICVASTLATTHDPLTGVFAEWMRDNSKSYSNE-EFVFRWNVWRENQQLIEE 62

Query: 60  FNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLP 119
            NR  N+T  L++N+F DLT+ EF     G        +N++   A      P    GL 
Sbjct: 63  HNRS-NKTSFLAMNKFGDLTNAEFNKLFKGLAFDYSFHANKAA--AEKAVPAP----GLS 115

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--- 176
              DWR +GAVT VKNQG CG CW FS   + EG   ++TGRL SLSEQ ++DCSGS   
Sbjct: 116 ADFDWRQKGAVTHVKNQGQCGSCWSFSTTGSTEGANFLKTGRLTSLSEQNLIDCSGSYGN 175

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SEL 235
            GC GG MD AF YII ++G+  E  YPYQ  +  C +   A     + SY DV +  E 
Sbjct: 176 NGCNGGLMDYAFEYIINNKGIDTEASYPYQTAQYTCQYNP-ANSGGSLTSYTDVSSGDEN 234

Query: 236 ALRYAVSRQPVSVAIDASSPGFRYYSGGVF--AGPCGNNLNHAVTIVGYGSSNEGPYWLI 293
           AL  AV+ +P SVAIDAS   F++YSGGV+  +      L+H V  VG+G+ +   YWL+
Sbjct: 235 ALLNAVATEPTSVAIDASHNSFQFYSGGVYYESACSSTQLDHGVLAVGWGTEDGQDYWLV 294

Query: 294 KNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           KNSWG +WG  G+I+M R+   +  CGIA  ASYP A
Sbjct: 295 KNSWGADWGLAGYIKMARNR--SNNCGIATSASYPTA 329


>gi|293334761|ref|NP_001168296.1| uncharacterized protein LOC100382061 [Zea mays]
 gi|223947281|gb|ACN27724.1| unknown [Zea mays]
          Length = 322

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 130/301 (43%), Positives = 183/301 (60%), Gaps = 25/301 (8%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           W A   R+Y   AE+  RF+++++N   IE  NR    +Y+LS   F DLT EEF+A+HT
Sbjct: 10  WQATYNRSYLTAAERLRRFEVYRQNMELIEATNRRAELSYQLSETPFTDLTSEEFLATHT 69

Query: 89  GYKMPTRNISNQSQSYANNWF----------GYPDSRRG------LPRSIDWRARGAVTP 132
              M TR  ++++                  G   +RR       +P S+DWR +GAVT 
Sbjct: 70  ---MSTRLHASEAARRHRELITTHAGPVSDGGRQWNRRNYTTDLDVPESVDWRTKGAVTT 126

Query: 133 VKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSY 190
           VK+QG+CG CW F+ VAA+EG+ KIRTG+L+SLSEQ+VLDCS   + GC+GG    A  +
Sbjct: 127 VKDQGACGGCWSFATVAAIEGLHKIRTGQLVSLSEQEVLDCSSPPNNGCHGGNPAAAIDW 186

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVA 249
           +  + GLT E  YPY+ R+G C   +     A+IR  + V   +E AL  AV++QPV+V 
Sbjct: 187 VSANGGLTTESDYPYEGRQGKCKLDKARNHVAKIRGRKLVDQNNEAALEVAVAQQPVAVG 246

Query: 250 IDASSPGFRYYSGGVFAGPCG-NNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFI 307
           ++   P  ++Y  GVF GPC   +LNHAVT+VGYG+ + G  YW++KNSWG+ WGE G+ 
Sbjct: 247 MNV-HPIQQHYKSGVFHGPCDPEDLNHAVTMVGYGAESGGRKYWIVKNSWGEKWGEKGYF 305

Query: 308 R 308
           R
Sbjct: 306 R 306


>gi|431896621|gb|ELK06033.1| Cathepsin S [Pteropus alecto]
          Length = 331

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/326 (41%), Positives = 191/326 (58%), Gaps = 28/326 (8%)

Query: 17  LHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSL 72
           L  D    +H +LW    ++ Y+ + E+  R  I++KN +F+   N E   G  +Y L +
Sbjct: 18  LQRDPTLDRHWDLWKKTYSKHYREKIEEVARRLIWEKNLKFVMLHNLEHSMGMHSYDLGM 77

Query: 73  NEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGA 129
           N   D+T EE I+      +P+   RN++ +S          P+ +  LP S+DWR +G 
Sbjct: 78  NHLGDMTSEEVISLMGSLTVPSQWQRNVTYKSN---------PNQK--LPDSLDWRDKGC 126

Query: 130 VTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS----GSRGCYGGWMD 185
           VT VK QGSCG CW FSAV A+E   K++TG+L+SLS Q ++DCS     ++GC GG+M 
Sbjct: 127 VTEVKYQGSCGSCWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYSNKGCNGGFMT 186

Query: 186 DAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQ 244
            AF YII + G+  E  YPY+ ++G C +     +AA    Y ++P  SE AL+ AV+ +
Sbjct: 187 SAFQYIIDNNGIDSEASYPYKAQDGKCQYD-SKFRAATCSKYTELPFGSEEALKEAVANK 245

Query: 245 -PVSVAIDASSPGFRYYSGGVFAG-PCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
            PVSVAIDAS P F  Y  GV+    C   +NH V +VGYG+ +   YWL+KNSWG N+G
Sbjct: 246 GPVSVAIDASHPSFFLYRSGVYYDQSCTLKVNHGVLVVGYGNLDGKDYWLVKNSWGLNFG 305

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYP 328
           + G+IRM R+ G    CGIA   SYP
Sbjct: 306 DKGYIRMARNSGNH--CGIASYPSYP 329


>gi|354472953|ref|XP_003498701.1| PREDICTED: cathepsin K [Cricetulus griseus]
          Length = 329

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 194/318 (61%), Gaps = 17/318 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEF 75
           E+ +  + ELW     + Y ++ ++  R  I++KN + I   N E   G  TY+L++N  
Sbjct: 19  EEMLDTQWELWKKTHRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHL 78

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
            D+T EE +   TG K+P       S S++N+    P+     P +ID+R +G VTPVKN
Sbjct: 79  GDMTSEEVVQKMTGLKLPP------SHSHSNDTLYIPEWEGRAPDAIDYRKKGYVTPVKN 132

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYIIRS 194
           QG CG CW FS+  A+EG  K +TG+L++LS Q ++DC S + GC GG+M  AF Y+  +
Sbjct: 133 QGECGSCWAFSSAGALEGQLKKKTGKLLNLSPQNLVDCVSENYGCGGGYMTTAFRYVQTN 192

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVAIDA 252
            G+  E  YPY  ++  C +   A KAA+ R Y+++P  SE AL+ AV+R  P+SV+IDA
Sbjct: 193 GGIDSEDAYPYVGQDQSCMYNPTA-KAAKCRGYREIPVGSEKALKRAVARVGPISVSIDA 251

Query: 253 SSPGFRYYSGGVFAGP-C-GNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMR 310
           S   F++YS GV+    C G+N+NHAV +VGYG+     +W+IKNSWG++WG  G++ + 
Sbjct: 252 SLTSFQFYSRGVYYDENCDGDNVNHAVLVVGYGAQKGNKHWIIKNSWGESWGNKGYVLLA 311

Query: 311 RDVGGAGLCGIARKASYP 328
           R+   A  CGI   AS+P
Sbjct: 312 RNRNNA--CGITNLASFP 327


>gi|395535909|ref|XP_003769963.1| PREDICTED: cathepsin S [Sarcophilus harrisii]
          Length = 347

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/339 (39%), Positives = 196/339 (57%), Gaps = 26/339 (7%)

Query: 5   MVTWASLVMSRT---LHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +V W  L  + T   L  D +   H ELW     + Y+ Q ++  R  I++KN +F+   
Sbjct: 18  VVIWMFLACASTTAYLRHDPMLDNHWELWKKTYGKQYEEQNQEVTRRLIWEKNLKFVTLH 77

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N E   G  +Y LS+N  +D+T EE  +  +  ++P +        ++ N     +S + 
Sbjct: 78  NLEHSMGLHSYDLSMNHLSDMTSEEVASLMSSLRIPNQ--------WSRNTTYRLNSNQK 129

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-- 175
           LP S+DWR +G VT VK QG+CG CW FSAV A+E   K++TG+L+SLS Q ++DCS   
Sbjct: 130 LPDSVDWRDKGCVTEVKYQGTCGSCWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTNE 189

Query: 176 ---SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT 232
              + GC GG M +AF YII + G+  +  YPY+ ++G C +   A +AA    Y ++P 
Sbjct: 190 KYENHGCNGGCMTEAFQYIIDNNGIDSDASYPYKAKDGKCQYNP-ANRAATCSRYTELPY 248

Query: 233 -SELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGP 289
            SE AL+ AV+ + PVSV IDAS P F  Y  GV+  P C  N+NH V + GYG+ +   
Sbjct: 249 GSEDALKEAVANKGPVSVGIDASLPSFFLYKSGVYYDPSCTQNVNHGVLVTGYGNLDGKD 308

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           YWL+KNSWG ++G+ G+IR+ R+ G    CGIA   SYP
Sbjct: 309 YWLVKNSWGLSFGDKGYIRIARNRGNH--CGIANFPSYP 345


>gi|391343119|ref|XP_003745860.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 385

 Score =  236 bits (601), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/336 (40%), Positives = 198/336 (58%), Gaps = 17/336 (5%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           + ++   A + ++  L  +    +H E + A+  + Y++  E+ MR  IF++N +FIE  
Sbjct: 56  MKLLAVLAVIGLASALSPNPNLNQHWENFKAEHNKKYESFPEELMRRLIFEENHQFIEDH 115

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N +    + L +N F DLT++E+   + GY+ P       + S A+  F   +    +P 
Sbjct: 116 NSKKEFDFYLGMNHFGDLTNKEYRERYLGYRRP-----ENTPSKASYIFSRAEKIEDVPD 170

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSR 177
            IDWR +G VTPVKNQG CG CW FSAV ++EG     TG+L+SLSEQ ++DCS   G+ 
Sbjct: 171 QIDWRDQGFVTPVKNQGQCGSCWAFSAVGSLEGQHFKSTGKLVSLSEQNLVDCSTPEGNS 230

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GGWMD AF Y+  + G+  E  YPY   +G C+++  ++  A ++ + DV    E A
Sbjct: 231 GCNGGWMDQAFEYVKDNHGIDTEDSYPYVGTDGSCHFKNKSI-GATLKGFMDVKEGDEEA 289

Query: 237 LRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNN-LNHAVTIVGYGSSNEGP-YWL 292
           LR AV    PVSVAIDASS  F++Y GGV+  P C  + L+H V +VGYG   +G  +W+
Sbjct: 290 LRQAVGVAGPVSVAIDASSMLFQFYRGGVYNVPWCSTSELDHGVLVVGYGKQFQGKDFWM 349

Query: 293 IKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           +KNSWG  WG  G+I M R+ G    CGIA KAS P
Sbjct: 350 VKNSWGVGWGIYGYIEMSRNKGNQ--CGIASKASIP 383


>gi|391338870|ref|XP_003743778.1| PREDICTED: cathepsin L-like isoform 1 [Metaseiulus occidentalis]
 gi|391338872|ref|XP_003743779.1| PREDICTED: cathepsin L-like isoform 2 [Metaseiulus occidentalis]
 gi|391338874|ref|XP_003743780.1| PREDICTED: cathepsin L-like isoform 3 [Metaseiulus occidentalis]
          Length = 331

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/341 (39%), Positives = 200/341 (58%), Gaps = 23/341 (6%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
            LI+ V   +   + TL E    A+ + +     + Y+    +A R KIF +N   I + 
Sbjct: 3   FLILAVLVGAASAALTL-EQLFDAEWQNFKVHHNKKYEGSTVEAFRKKIFLQNTHLIARH 61

Query: 61  N---REGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N    +G  TYKL +N+F D+   EF+++  G     R        + + W   P+S   
Sbjct: 62  NIKHAKGETTYKLKMNQFGDMLHHEFVSTMNGLLRSNRTY------FGSTWI-EPESVS- 113

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           LP+S+DWR +GAVTPVKNQG CG CW FS   A+EG    +TG L+SLSEQ ++DCS   
Sbjct: 114 LPKSVDWREKGAVTPVKNQGHCGSCWSFSTTGALEGQLFRKTGELVSLSEQNLIDCSTSY 173

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-S 233
           G+ GC GG MD+AF+YI  + G+  E  YPY+ ++G C + +    A R   + D+P+ +
Sbjct: 174 GNNGCGGGLMDNAFTYIKENHGIDTEESYPYEGKQGKCRYHK-EDSAGRDTGFVDIPSGN 232

Query: 234 ELALRYAVSR-QPVSVAIDASSPGFRYYSGGVFAGP-C-GNNLNHAVTIVGYGSSNEG-P 289
           E AL  A++   PVSVAIDAS   F++Y  GV+  P C  ++L+H V  VGYG++++G  
Sbjct: 233 ERALAKALATIGPVSVAIDASHESFQFYHEGVYNPPDCDSHSLDHGVLAVGYGTTDDGQD 292

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           Y++IKNSWG+ WG+ G++ M R+      CG+A +ASYP+ 
Sbjct: 293 YYIIKNSWGERWGQEGYVLMARN--SKNECGVATQASYPLV 331


>gi|440793751|gb|ELR14926.1| Cysteine proteinase 5, putative [Acanthamoeba castellanii str.
           Neff]
          Length = 326

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/335 (39%), Positives = 192/335 (57%), Gaps = 20/335 (5%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L+ +     +  +  +  D ++     WM +  ++Y N+ E   R+ ++++N+ +IE  N
Sbjct: 6   LLALCVALFVASTFAVSHDPLTGVFADWMQEHQKSYANE-EFVYRWNVWRENYLYIEAHN 64

Query: 62  REGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRS 121
            + N+++ L++N+F DLT+ EF     G  + T + + Q    A           GLP  
Sbjct: 65  HQ-NKSFHLAMNKFGDLTNAEFNKLFKGLSI-TADQAKQESDIA--------PAPGLPAD 114

Query: 122 IDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRG 178
            DWR +GAVT VKNQG CG CW FS   + EG   ++ GRL SLSEQ ++DCS   G+ G
Sbjct: 115 FDWRQKGAVTHVKNQGQCGSCWSFSTTGSTEGANFLKHGRLTSLSEQNLVDCSTSYGNHG 174

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELAL 237
           C GG MD AF YIIR++G+  E  YPY   +G C + +       + SY +VP+ +E AL
Sbjct: 175 CNGGLMDYAFEYIIRNKGIDTEESYPYHASQGTCRYNK-QHSGGELVSYTNVPSGNEGAL 233

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGP-CGNN-LNHAVTIVGYGSSNEGPYWLIKN 295
             AV+ QP SVAIDAS   F++Y GGV+  P C ++ L+H V  VG+G  +   YWL+KN
Sbjct: 234 LNAVATQPTSVAIDASHSSFQFYKGGVYDEPACSSSRLDHGVLAVGWGVRDGKDYWLVKN 293

Query: 296 SWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           SWG +WG  G+I M R+      CGIA  AS+P A
Sbjct: 294 SWGADWGLSGYIEMSRNKHNQ--CGIATAASHPHA 326


>gi|2961621|gb|AAC05781.1| cathepsin S [Mus musculus]
          Length = 340

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/344 (40%), Positives = 198/344 (57%), Gaps = 34/344 (9%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L  M    S+ M +   + ++    +LW     + YK++ E+ +R  I++KN +FI   N
Sbjct: 12  LFWMPLVCSVAMEQLQRDPTLDYHWDLWKKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHN 71

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQS------QSYANNWFGYP 112
            E   G  TY++ +N+  D+T+EE        +M    IS QS      +SY+N      
Sbjct: 72  LEYSMGMHTYQVGMNDMGDMTNEEISC-----RMGALRISRQSPKTVTFRSYSN------ 120

Query: 113 DSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLD 172
              R LP ++DWR +G VT VK QGSCG CW FSAV A+EG  K++TG+LISLS Q ++D
Sbjct: 121 ---RTLPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVD 177

Query: 173 CS-----GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSY 227
           CS     G++GC GG+M +AF YII + G+  +  YPY+  +  C++     +AA    Y
Sbjct: 178 CSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEKCHYN-SKNRAATCSRY 236

Query: 228 QDVP-TSELALRYAV-SRQPVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGS 284
             +P   E AL+ AV ++ PVSV IDAS   F +Y  GV+  P C  N+NH V +VGYG+
Sbjct: 237 IQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTGNVNHGVLVVGYGT 296

Query: 285 SNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
            +   YWL+KNSWG N+G+ G+IRM R+      CGIA   SYP
Sbjct: 297 LDGKDYWLVKNSWGLNFGDQGYIRMARN--NKNHCGIASYCSYP 338


>gi|2746723|gb|AAB94925.1| cathepsin S precursor [Mus musculus]
          Length = 340

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/344 (40%), Positives = 198/344 (57%), Gaps = 34/344 (9%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L  M    S+ M +   + ++    +LW     + YK++ E+ +R  I++KN +FI   N
Sbjct: 12  LFWMPLVCSVAMEQLQRDPTLDYHWDLWKKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHN 71

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQS------QSYANNWFGYP 112
            E   G  TY++ +N+  D+T+EE        +M    IS QS      +SY+N      
Sbjct: 72  LEYSMGMHTYQVGMNDMGDMTNEEISC-----RMGALRISRQSPKTVTFRSYSN------ 120

Query: 113 DSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLD 172
              R LP ++DWR +G VT VK QGSCG CW FSAV A+EG  K++TG+LISLS Q ++D
Sbjct: 121 ---RTLPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVD 177

Query: 173 CS-----GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSY 227
           CS     G++GC GG+M +AF YII + G+  +  YPY+  +  C++     +AA    Y
Sbjct: 178 CSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKAMDEKCHYN-SKNRAATCSRY 236

Query: 228 QDVP-TSELALRYAV-SRQPVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGS 284
             +P   E AL+ AV ++ PVSV IDAS   F +Y  GV+  P C  N+NH V +VGYG+
Sbjct: 237 IQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTGNVNHGVLVVGYGT 296

Query: 285 SNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
            +   YWL+KNSWG N+G+ G+IRM R+      CGIA   SYP
Sbjct: 297 LDGKDYWLVKNSWGLNFGDQGYIRMARN--NKNHCGIASYCSYP 338


>gi|402770505|gb|AFQ98387.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 127/322 (39%), Positives = 184/322 (57%), Gaps = 37/322 (11%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEF 83
           E +     +TY++  E+ +RFKIF +N   I K N +   G  +YKL +N+F DL   EF
Sbjct: 28  EAFKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEF 87

Query: 84  IASHTGYK----------MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPV 133
                G++          +P  N+++ S                LP+++DWR +GAVTPV
Sbjct: 88  ARIFNGHRGTRKTGGSTFLPPANVNDSS----------------LPKAVDWRKKGAVTPV 131

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSY 190
           K+QG CG CW FSA  ++EG   ++ G L+SLSEQ ++DCS   G+ GC GG M+DAF Y
Sbjct: 132 KDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKY 191

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQ-PVSVA 249
           I  + G+  E+ YPY+  +G C +++  + A      +    SE+ L+ AV+   P+SVA
Sbjct: 192 IKANDGIDTEKSYPYEAVDGECRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVA 251

Query: 250 IDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFI 307
           IDAS   F+ YS GV+  P     +L+H V +VGYG      YWL+KNSW ++WG+ G+I
Sbjct: 252 IDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYI 311

Query: 308 RMRRDVGGAGLCGIARKASYPI 329
            M RD      CGIA +ASYP+
Sbjct: 312 LMSRD--NNNQCGIASQASYPL 331


>gi|391338876|ref|XP_003743781.1| PREDICTED: cathepsin L-like isoform 4 [Metaseiulus occidentalis]
          Length = 336

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/341 (39%), Positives = 200/341 (58%), Gaps = 23/341 (6%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
            LI+ V   +   + TL E    A+ + +     + Y+    +A R KIF +N   I + 
Sbjct: 8   FLILAVLVGAASAALTL-EQLFDAEWQNFKVHHNKKYEGSTVEAFRKKIFLQNTHLIARH 66

Query: 61  N---REGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N    +G  TYKL +N+F D+   EF+++  G     R        + + W   P+S   
Sbjct: 67  NIKHAKGETTYKLKMNQFGDMLHHEFVSTMNGLLRSNRTY------FGSTWI-EPESVS- 118

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           LP+S+DWR +GAVTPVKNQG CG CW FS   A+EG    +TG L+SLSEQ ++DCS   
Sbjct: 119 LPKSVDWREKGAVTPVKNQGHCGSCWSFSTTGALEGQLFRKTGELVSLSEQNLIDCSTSY 178

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-S 233
           G+ GC GG MD+AF+YI  + G+  E  YPY+ ++G C + +    A R   + D+P+ +
Sbjct: 179 GNNGCGGGLMDNAFTYIKENHGIDTEESYPYEGKQGKCRYHK-EDSAGRDTGFVDIPSGN 237

Query: 234 ELALRYAVSR-QPVSVAIDASSPGFRYYSGGVFAGP-C-GNNLNHAVTIVGYGSSNEG-P 289
           E AL  A++   PVSVAIDAS   F++Y  GV+  P C  ++L+H V  VGYG++++G  
Sbjct: 238 ERALAKALATIGPVSVAIDASHESFQFYHEGVYNPPDCDSHSLDHGVLAVGYGTTDDGQD 297

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           Y++IKNSWG+ WG+ G++ M R+      CG+A +ASYP+ 
Sbjct: 298 YYIIKNSWGERWGQEGYVLMARN--SKNECGVATQASYPLV 336


>gi|112490572|pdb|2FO5|A Chain A, Crystal Structure Of Recombinant Barley Cysteine
           Endoprotease B Isoform 2 (Ep-B2) In Complex With
           Leupeptin
 gi|112490573|pdb|2FO5|B Chain B, Crystal Structure Of Recombinant Barley Cysteine
           Endoprotease B Isoform 2 (Ep-B2) In Complex With
           Leupeptin
 gi|112490574|pdb|2FO5|C Chain C, Crystal Structure Of Recombinant Barley Cysteine
           Endoprotease B Isoform 2 (Ep-B2) In Complex With
           Leupeptin
 gi|112490575|pdb|2FO5|D Chain D, Crystal Structure Of Recombinant Barley Cysteine
           Endoprotease B Isoform 2 (Ep-B2) In Complex With
           Leupeptin
          Length = 262

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 118/220 (53%), Positives = 149/220 (67%), Gaps = 8/220 (3%)

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SG 175
           LP S+DWR +GAVT VK+QG CG CW FS V +VEGI  IRTG L+SLSEQ+++DC  + 
Sbjct: 4   LPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTAD 63

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKA---ARIRSYQDVPT 232
           + GC GG MD+AF YI  + GL  E  YPY+   G CN  R A  +     I  +QDVP 
Sbjct: 64  NDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPA 123

Query: 233 -SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PY 290
            SE  L  AV+ QPVSVA++AS   F +YS GVF G CG  L+H V +VGYG + +G  Y
Sbjct: 124 NSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGECGTELDHGVAVVGYGVAEDGKAY 183

Query: 291 WLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPI 329
           W +KNSWG +WGE G+IR+ +D G + GLCGIA +ASYP+
Sbjct: 184 WTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPV 223


>gi|4731372|gb|AAD28476.1|AF133838_1 papain-like cysteine protease [Sandersonia aurantiaca]
          Length = 370

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 112/216 (51%), Positives = 153/216 (70%), Gaps = 4/216 (1%)

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS- 176
           LP S+DWR +GAV P+K+QG CG CW FS +A+VEGI KI TG LISLSEQ+++DC  + 
Sbjct: 41  LPDSVDWREKGAVVPIKDQGGCGSCWAFSTIASVEGINKIVTGDLISLSEQELVDCDKTY 100

Query: 177 -RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-E 234
             GC GG MD AF +II + G+  E+ YPY  ++G C+  R   K   I SY+DVP + E
Sbjct: 101 NDGCNGGLMDYAFQFIIDNGGIDTEKDYPYTEQDGRCDSYRKNAKVVSINSYEDVPVNDE 160

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIK 294
            AL+ A + QP++VAID     F+ Y+ G+F G CG +L+H VT+VGYGS +   YW+++
Sbjct: 161 QALKKAAASQPIAVAIDGGGRSFQLYNSGIFTGKCGTSLDHGVTVVGYGSESGKDYWIVR 220

Query: 295 NSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
           NSWG++WGE G+IRM R++   +G+CGIA +ASYPI
Sbjct: 221 NSWGESWGEKGYIRMARNIDSPSGICGIAMEASYPI 256


>gi|33348836|gb|AAQ16118.1| cathepsin L-like cysteine proteinase B [Rhipicephalus
           haemaphysaloides haemaphysaloides]
          Length = 335

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/340 (39%), Positives = 198/340 (58%), Gaps = 21/340 (6%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +  + VT A++      H++ + A+   + A   + Y +  E+  R KI+ +N   I + 
Sbjct: 7   LCCLFVTAAAIT-----HQELVGAEWSAFKALHGKDYASDTEEYYRLKIYMENRLKIARH 61

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N +      +YKL++NEF DL   EF+++  G+K   R+ S +  S+     G+ D +  
Sbjct: 62  NEKYAKSQVSYKLAMNEFGDLLHHEFVSTRNGFKRNYRD-SPREGSFFVEPEGFEDLQ-- 118

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           LP+++DWR +GAVTPVKNQG CG CW FS   ++EG    +T +L+SLSEQ ++DCS   
Sbjct: 119 LPKTVDWRKKGAVTPVKNQGQCGSCWAFSTTGSLEGPHFRKTRKLVSLSEQNLVDCSRSF 178

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-S 233
           G+ GC GG MD+AF YI  ++G+  E  YPY   +G C++ R  + A     + D+P   
Sbjct: 179 GNNGCEGGLMDNAFKYIKSNKGIDTEWSYPYNATDGVCHFNRSDVGATDT-GFVDIPEGD 237

Query: 234 ELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEGPY 290
           E  L+ AV+   PVSVAIDAS   F++YS GV+  P      L+H V +VGYG+ +   Y
Sbjct: 238 ENKLKKAVAAVGPVSVAIDASHESFQFYSEGVYDEPECSSEQLDHGVLVVGYGTKDGQDY 297

Query: 291 WLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           WL+KNSWG  WG+ G+I M R+      CGIA  ASYP+ 
Sbjct: 298 WLVKNSWGTTWGDEGYIYMTRNKDNQ--CGIASSASYPLV 335


>gi|354507493|ref|XP_003515790.1| PREDICTED: cathepsin L1-like [Cricetulus griseus]
 gi|344259154|gb|EGW15258.1| Cathepsin L1 [Cricetulus griseus]
          Length = 333

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/321 (40%), Positives = 184/321 (57%), Gaps = 26/321 (8%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEFAD 77
           + +A+   W +   R Y    E+  R  +++KN + IE  N    EG   Y + +N F D
Sbjct: 24  TFNAQWHKWKSTYRRLYGTNEEEWRR-AVWEKNMKMIELHNGEYSEGKHGYTMEMNAFGD 82

Query: 78  LTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQG 137
           +T+EEF     GYK          +      F  P   + LP+S+DWR +G VTPVKNQG
Sbjct: 83  MTNEEFRQLVNGYK--------HQKHRKGKVFQEPLMLQ-LPKSVDWREKGCVTPVKNQG 133

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRS 194
            CG CW FSA  A+EG   ++TG L+SLSEQ ++DCS   G++GC GG MD AF Y++ +
Sbjct: 134 QCGSCWAFSACGALEGQMCLKTGVLVSLSEQNLVDCSQAEGNQGCNGGLMDFAFQYVLNN 193

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSR-QPVSVAIDAS 253
           +GL  E  YPY+ ++G C + +    AA    Y D+P  E AL  AV+   P+++AIDAS
Sbjct: 194 KGLDSEESYPYEAKDGTCKY-KPEFAAANDTGYVDIPQLEKALMKAVATVGPIAIAIDAS 252

Query: 254 SPGFRYYSGGVFAGP--CGNNLNHAVTIVGYG----SSNEGPYWLIKNSWGQNWGEGGFI 307
            P F++YS G++  P      L+H V +VGYG     SN+  YW++KNSWG +WG GGF 
Sbjct: 253 HPSFQFYSSGIYYEPNCSSKELDHGVLVVGYGFEGTDSNKKKYWIVKNSWGSSWGMGGFF 312

Query: 308 RMRRDVGGAGLCGIARKASYP 328
            + +D      CG+A  ASYP
Sbjct: 313 HIAKDKNNH--CGVATAASYP 331


>gi|383849553|ref|XP_003700409.1| PREDICTED: cathepsin L-like [Megachile rotundata]
          Length = 343

 Score =  235 bits (599), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/344 (39%), Positives = 202/344 (58%), Gaps = 23/344 (6%)

Query: 1   MLIIMVTWAS---LVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFI 57
           +L+I++T A+   +     ++++ I+ K E       + YK++AE+ +R KI+ KN   I
Sbjct: 5   LLLIVITCAAVQAISFFELVNQEWINFKME-----HKKCYKHEAEERLRMKIYMKNKLQI 59

Query: 58  EKFNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDS 114
            + N +      TY+L +N++ D+ + EF     GY     +     +      F  P +
Sbjct: 60  AQHNCDYELKKVTYRLKINKYGDMLNHEFKNMLNGYNRTINHTLRNERLPVGAAFIEPCN 119

Query: 115 RRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS 174
              LP+ +DWR  GAVT VK+QG CG CW FSA  ++EG    RTG L+SLSEQ ++DCS
Sbjct: 120 VE-LPKMVDWRKCGAVTEVKDQGHCGSCWAFSATGSLEGQHFRRTGVLVSLSEQNLIDCS 178

Query: 175 GS---RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP 231
           GS    GC GG MD AFSYI  ++GL  E+ YPY+  +  C + + +  A+ +  + D+P
Sbjct: 179 GSYGNNGCNGGLMDQAFSYIKDNKGLDTEKTYPYEGEDDKCRYDKRSSGASDV-GFVDIP 237

Query: 232 T-SELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNE 287
              E  L+ AV+   PVSVAIDAS   F++YS G++  P     NL+H V +VGYG+  E
Sbjct: 238 VGDEQKLKAAVATVGPVSVAIDASHQSFQFYSDGIYFEPECSSTNLDHGVLVVGYGTDEE 297

Query: 288 G-PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           G  YW++KNSWG++WGE G+I+M R++     CGIA  ASYPI 
Sbjct: 298 GRDYWIVKNSWGESWGEKGYIKMARNIDNH--CGIASSASYPIV 339


>gi|213512938|ref|NP_001133871.1| Cathepsin K precursor [Salmo salar]
 gi|209155648|gb|ACI34056.1| Cathepsin K precursor [Salmo salar]
 gi|223647252|gb|ACN10384.1| Cathepsin K precursor [Salmo salar]
 gi|223673129|gb|ACN12746.1| Cathepsin K precursor [Salmo salar]
          Length = 331

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 133/328 (40%), Positives = 194/328 (59%), Gaps = 21/328 (6%)

Query: 12  VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTY 68
           V++  L+E S+ A+ + W     R Y    E+ +R  I++KN R IE  N E   G  +Y
Sbjct: 14  VLAHPLNEMSLDAQWDSWKTTHLREYNGLGEEVIRRTIWEKNMRLIEAHNEEAALGIHSY 73

Query: 69  KLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRR-GLPRSIDWRAR 127
           +L +N   D+T EE     TG ++P       ++  +N W   PD+    +PRSID+R +
Sbjct: 74  ELGMNHLGDMTSEEIAEKLTGLQVP------MNRDRSNTWI--PDNNVVKIPRSIDYRKK 125

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDD 186
           G VTPVKNQ SCG CW FS+  A+EG     TG+LI LS Q ++DC + + GC GG+M +
Sbjct: 126 GMVTPVKNQLSCGSCWAFSSAGALEGQLAKTTGKLIDLSPQNLVDCVTENNGCGGGYMTN 185

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ- 244
           AF Y+  + G+  E  YPY  ++G C +    M  A+ R ++++P   E AL  AV +  
Sbjct: 186 AFEYVEENGGIDTEEAYPYLGQDGQCAYNASGM-GAQCRGFKEIPEGDEWALTKAVVKVG 244

Query: 245 PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEG-PYWLIKNSWGQNW 301
           PV+V IDA+   F++Y  GV+  P  N  ++NHAV  VGYG + +G  +W++KNSW ++W
Sbjct: 245 PVAVGIDATLSTFQFYQRGVYYDPNCNKDDINHAVLAVGYGQTAKGMKFWIVKNSWSESW 304

Query: 302 GEGGFIRMRRDVGGAGLCGIARKASYPI 329
           G+ G+I M R+ G A  CGIA  ASYPI
Sbjct: 305 GKQGYIMMARNRGNA--CGIANLASYPI 330


>gi|307111936|gb|EFN60170.1| hypothetical protein CHLNCDRAFT_59551 [Chlorella variabilis]
          Length = 364

 Score =  234 bits (598), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 136/314 (43%), Positives = 178/314 (56%), Gaps = 30/314 (9%)

Query: 33  SARTYKNQAEK-AMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGY- 90
           S R Y + AE    RF I+  N RF  ++N   + ++ LS+  +ADL+ +E+ +   GY 
Sbjct: 57  SNRAYASSAEVYERRFNIWLDNLRFAHEYNAR-HTSHWLSMGVYADLSQDEYRSKALGYN 115

Query: 91  -----KMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIF 145
                K P R             F Y  +    P  +DW A GAVTPVK+Q  CG CW F
Sbjct: 116 AHLHKKRPLRAAP----------FLYKGTVP--PEEVDWVAGGAVTPVKDQLLCGSCWAF 163

Query: 146 SAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSYIIRSQGLTDERVY 203
           S   AVEG   I TG+L+SLSEQ ++DC      GC GG+MD AF +I+ + G+  E  Y
Sbjct: 164 STTGAVEGANAIATGKLVSLSEQMLVDCDREYDTGCRGGFMDSAFDFIVNNGGIDTEDDY 223

Query: 204 PYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGFRYYSG 262
           PY+  +G C   R       I  YQDV P  E AL  AV+ QPVSVAI+A    F+ Y G
Sbjct: 224 PYRAEDGICQDNRTRRHVVTIDGYQDVPPNDENALMKAVAHQPVSVAIEADQLAFQLYGG 283

Query: 263 GVFAGPCGNNLNHAVTIVGYGSSNEG----PYWLIKNSWGQNWGEGGFIRMRRDVGG--- 315
           GVF   CG  L+HAV +VGYG+++ G    PYWL+KNSWG  WGE G+IR+ R++G    
Sbjct: 284 GVFDAECGTALDHAVLVVGYGTASNGTHNLPYWLVKNSWGAEWGEKGYIRLLRNLGKDAP 343

Query: 316 AGLCGIARKASYPI 329
            G CG+A  AS+PI
Sbjct: 344 EGQCGLAMYASFPI 357


>gi|440893559|gb|ELR46281.1| Cathepsin L1 [Bos grunniens mutus]
          Length = 330

 Score =  234 bits (598), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 129/340 (37%), Positives = 197/340 (57%), Gaps = 29/340 (8%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L++      +  +    + S+  + +LW A   + Y +  E+  R  ++KKN + IE  N
Sbjct: 5   LLLTALCLGIASAAAKFDHSLDTQWKLWKATHRKPY-DLNEEGWRKAVWKKNMKMIELHN 63

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL 118
           +E   G  ++ +++N F D+T+EEF  +  G++   +N   +   +A+           +
Sbjct: 64  QEYSQGKHSFSMAMNAFGDMTNEEFRHTMNGFQR-QKNKKGKETIFAS-----------I 111

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---G 175
           P S+DWR +G VTPVKNQG CG CW FSA  A+EG    +TG+L+SLSEQ ++DCS   G
Sbjct: 112 PPSMDWREKGYVTPVKNQGKCGSCWAFSATGALEGQMFQKTGKLVSLSEQNLVDCSQPEG 171

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSEL 235
           +RGC+GG++D+AF Y++   GL  E  YPY    G C +      AA    + D+P  E 
Sbjct: 172 NRGCHGGFIDNAFQYVLDVGGLDSEESYPYTGLVGTCLYNPNN-SAANETGFVDLPKQEK 230

Query: 236 ALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYG----SSNEG 288
           AL  AV+   P+SVA+DA +P F++Y  G++  P     +++HAV +VGYG     S++ 
Sbjct: 231 ALMKAVATLGPISVAVDAHNPSFQFYKSGIYYEPNCSSESVDHAVLVVGYGFEGADSDDN 290

Query: 289 PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
            YWL+KNSWG++WG  G+I+M +D      CGIA  ASYP
Sbjct: 291 KYWLVKNSWGEHWGMDGYIKMAKDRNNH--CGIATMASYP 328


>gi|18407678|ref|NP_566867.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|30315950|sp|Q9LXW3.1|CPR2_ARATH RecName: Full=Probable cysteine proteinase At3g43960; Flags:
           Precursor
 gi|7594557|emb|CAB88124.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|26452289|dbj|BAC43231.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|332644328|gb|AEE77849.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 376

 Score =  234 bits (598), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 136/323 (42%), Positives = 194/323 (60%), Gaps = 20/323 (6%)

Query: 18  HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFAD 77
           +E  +   +E W+ ++ + Y    EK  RFKIFK N + IE+ N + N++Y+  LN+F+D
Sbjct: 33  NEGEVLTMYEQWLVENGKNYNGLGEKERRFKIFKDNLKRIEEHNSDPNRSYERGLNKFSD 92

Query: 78  LTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTP-VKNQ 136
           LT +EF AS+ G KM  +++S+ ++ Y      Y +    LP  +DWR RGAV P VK Q
Sbjct: 93  LTADEFQASYLGGKMEKKSLSDVAERYQ-----YKEGDV-LPDEVDWRERGAVVPRVKRQ 146

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSRGCYGGWMDDAFSYIIR 193
           G CG CW F+A  AVEGI +I TG L+SLSEQ+++DC   + + GC GG    AF +I  
Sbjct: 147 GECGSCWAFAATGAVEGINQITTGELVSLSEQELIDCDRGNDNFGCAGGGAVWAFEFIKE 206

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKAAR---IRSYQDVPTS-ELALRYAVSRQPVSVA 249
           + G+  + VY Y   E     +   MK  R   I  ++ VP + E++L+ AV+ QP+SV 
Sbjct: 207 NGGIVSDEVYGYT-GEDTAACKAIEMKTTRVVTINGHEVVPVNDEMSLKKAVAYQPISVM 265

Query: 250 IDASSPGFRYYSGGVFAGPCGNNL-NHAVTIVGYG-SSNEGPYWLIKNSWGQNWGEGGFI 307
           I A++     Y  GV+ G C N   +H V IVGYG SS+EG YWLI+NSWG  WGEGG++
Sbjct: 266 ISAAN--MSDYKSGVYKGACSNLWGDHNVLIVGYGTSSDEGDYWLIRNSWGPEWGEGGYL 323

Query: 308 RMRRDVGG-AGLCGIARKASYPI 329
           R++R+     G C +A    YPI
Sbjct: 324 RLQRNFHEPTGKCAVAVAPVYPI 346


>gi|297663703|ref|XP_002810310.1| PREDICTED: LOW QUALITY PROTEIN: cathepsin S [Pongo abelii]
          Length = 330

 Score =  234 bits (598), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 137/342 (40%), Positives = 196/342 (57%), Gaps = 31/342 (9%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           ++ +++  +S V    LH+D     H  LW     + YK + E+A+R  I++KN +F+  
Sbjct: 4   LVCVLLVCSSAVAQ--LHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMI 61

Query: 60  FNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQSYANNWFGYPD 113
            N E   G  +Y L +N   D+T EE ++  +  ++P+   RNI+ +S           +
Sbjct: 62  HNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRNITYKS-----------N 110

Query: 114 SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
             R LP S+DWR +G VT VK QGSCG CW FSAV A+E   K++TG+L+SLS Q ++DC
Sbjct: 111 PNRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDC 170

Query: 174 S----GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQD 229
           S    G++GC GG+M  AF YII ++G+  +  YPY+     C +     +AA    Y D
Sbjct: 171 STEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMVK-CQYD-SKYRAATCSKYTD 228

Query: 230 VPTS-ELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSN 286
                E  L+ AV+ + PVSV +DA  P F  Y  GV+  P C  N+NH V +VGYG  N
Sbjct: 229 FXYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLN 288

Query: 287 EGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
              YWL+KNSWG+N+GE G+IRM R+ G    CGIA   S+P
Sbjct: 289 GKEYWLVKNSWGRNFGEEGYIRMARNKGNH--CGIASFPSFP 328


>gi|125564726|gb|EAZ10106.1| hypothetical protein OsI_32416 [Oryza sativa Indica Group]
          Length = 349

 Score =  234 bits (598), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 127/296 (42%), Positives = 178/296 (60%), Gaps = 12/296 (4%)

Query: 39  NQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNIS 98
           + AE   RF+ FK N R++ +FN++   TYKL LN+FAD+T EEF+A +TG K+    ++
Sbjct: 42  DVAETESRFEAFKANARYVSEFNKKEGMTYKLGLNKFADMTLEEFVAKYTGTKVDAAAMA 101

Query: 99  NQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIR 158
              Q+              +  S DWR  GAVTP + QG+C  CW FSAV AVEG   I 
Sbjct: 102 RAPQAEEELELA-----GDVAASWDWRQHGAVTPAREQGTCESCWAFSAVGAVEGANAIA 156

Query: 159 TGRLISLSEQQVLDCSGSRGCYGG--WMDDAFSYIIRSQGLTDERVY-PYQRREGYCNWQ 215
           TG+L++LSEQQVLDCSG+  C GG  +      Y ++ QG++    Y PY+ ++  C   
Sbjct: 157 TGKLVTLSEQQVLDCSGAGDCIGGGSYFPVLHGYAVK-QGISPAGSYPPYEAKDRACRRN 215

Query: 216 RGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNH 275
             A+   ++    DVP SE AL+ +V R PV+V+I+A+    + Y  GV++GPCG  +NH
Sbjct: 216 TPAVPVVKMDGAVDVPASEAALKRSVYRAPVAVSIEATQ-SLQLYKEGVYSGPCGTTVNH 274

Query: 276 AVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPI 329
            V +VGYG + +   YW+IKNSWG+ WG+ GF  M+RDV    GLCGIA    Y +
Sbjct: 275 GVLVVGYGVTRDNIKYWIIKNSWGKEWGDNGFGHMKRDVIAKEGLCGIAMYGVYSV 330


>gi|356517398|ref|XP_003527374.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
          Length = 333

 Score =  234 bits (598), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 140/341 (41%), Positives = 188/341 (55%), Gaps = 32/341 (9%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           ML+ M   A  V  RTL + S+  +HE  M + ++ YK+  E       F  N  +IE  
Sbjct: 14  MLLCMAFLAFQVTCRTLQDASMYERHEQRMTRYSKVYKDPPES------FXGNVNYIEAC 67

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N   ++ YK  +N+F      +     +  ++ T    N + +               P 
Sbjct: 68  NNAADKPYKXGINQFPPRNRFKGHMCSSIIRITTFKFENVTAT---------------PS 112

Query: 121 SIDWRARGAVTP--VKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLS-EQQVLDCSG-- 175
           ++D R +GAVTP  VK+QG CGC W  SAVAA EGI  +  G+LI LS E +++DC    
Sbjct: 113 TVDCRQKGAVTPYTVKDQGQCGCFWALSAVAATEGIHALXAGKLILLSXEPELVDCDTKG 172

Query: 176 -SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRS-YQDVPTS 233
             +GC GG  DDAF +II++ GL  E  YPY+  +G CN       AA I + Y DVP +
Sbjct: 173 VDQGCEGGLTDDAFKFIIQNHGLNTEANYPYKGVDGKCNANEADKNAATIITGYDDVPAN 232

Query: 234 --ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PY 290
             +  L+ AV+  PVSVAIDAS   F++Y  GVF G CG  L+H VT VGYG S++G  Y
Sbjct: 233 NEKAHLQKAVANNPVSVAIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGVSDDGTEY 292

Query: 291 WLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330
           WL+KNS G  WGE G+IRM+R V     LCGIA +ASYP A
Sbjct: 293 WLVKNSRGPEWGEEGYIRMQRGVDSEEALCGIAVQASYPSA 333


>gi|31982433|ref|NP_031828.2| cathepsin K precursor [Mus musculus]
 gi|12644320|sp|P55097.2|CATK_MOUSE RecName: Full=Cathepsin K; Flags: Precursor
 gi|3550487|emb|CAA06825.1| cathepsin K [Mus musculus]
 gi|12834090|dbj|BAB22783.1| unnamed protein product [Mus musculus]
 gi|28277388|gb|AAH46320.1| Cathepsin K [Mus musculus]
 gi|74209960|dbj|BAE21279.1| unnamed protein product [Mus musculus]
 gi|148706870|gb|EDL38817.1| cathepsin K, isoform CRA_a [Mus musculus]
          Length = 329

 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 132/336 (39%), Positives = 203/336 (60%), Gaps = 23/336 (6%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L+ MV++A         E+ +  + ELW     + Y ++ ++  R  I++KN + I   
Sbjct: 7   LLLPMVSFA------LSPEEMLDTQWELWKKTHQKQYNSKVDEISRRLIWEKNLKQISAH 60

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N E   G  TY+L++N   D+T EE +   TG ++P       S+SY+N+    P+    
Sbjct: 61  NLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLRIPP------SRSYSNDTLYTPEWEGR 114

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGS 176
           +P SID+R +G VTPVKNQG CG CW FS+  A+EG  K +TG+L++LS Q ++DC + +
Sbjct: 115 VPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTEN 174

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SEL 235
            GC GG+M  AF Y+ ++ G+  E  YPY  ++  C +   A KAA+ R Y+++P  +E 
Sbjct: 175 YGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESCMYNATA-KAAKCRGYREIPVGNEK 233

Query: 236 ALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CG-NNLNHAVTIVGYGSSNEGPYWL 292
           AL+ AV+R  P+SV+IDAS   F++YS GV+    C  +N+NHAV +VGYG+     +W+
Sbjct: 234 ALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQKGSKHWI 293

Query: 293 IKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           IKNSWG++WG  G+  + R+   A  CGI   AS+P
Sbjct: 294 IKNSWGESWGNKGYALLARNKNNA--CGITNMASFP 327


>gi|21593501|gb|AAM65468.1| cysteine proteinase [Arabidopsis thaliana]
          Length = 376

 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 136/323 (42%), Positives = 194/323 (60%), Gaps = 20/323 (6%)

Query: 18  HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFAD 77
           +E  +   +E W+ ++ + Y    EK  RFKIFK N + IE+ N + N++Y+  LN+F+D
Sbjct: 33  NEGGVLTMYEQWLVENGKNYNGLGEKERRFKIFKDNLKRIEEHNSDPNRSYERGLNKFSD 92

Query: 78  LTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTP-VKNQ 136
           LT +EF AS+ G KM  +++S+ ++ Y      Y +    LP  +DWR RGAV P VK Q
Sbjct: 93  LTADEFQASYLGGKMEKKSLSDVAERYQ-----YKEGDV-LPDEVDWRERGAVVPRVKRQ 146

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC---SGSRGCYGGWMDDAFSYIIR 193
           G CG CW F+A  AVEGI +I TG L+SLSEQ+++DC   + + GC GG    AF +I  
Sbjct: 147 GECGSCWAFAATGAVEGINQITTGELVSLSEQELIDCDRGNDNFGCAGGGAVWAFEFIKE 206

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKAAR---IRSYQDVPTS-ELALRYAVSRQPVSVA 249
           + G+  + VY Y   E     +   MK  R   I  ++ VP + E++L+ AV+ QP+SV 
Sbjct: 207 NGGIVSDEVYGYT-GEDTAACKAIEMKTTRVVTINGHEVVPVNDEMSLKKAVAYQPISVM 265

Query: 250 IDASSPGFRYYSGGVFAGPCGNNL-NHAVTIVGYG-SSNEGPYWLIKNSWGQNWGEGGFI 307
           I A++     Y  GV+ G C N   +H V IVGYG SS+EG YWLI+NSWG  WGEGG++
Sbjct: 266 ISAAN--MSDYKSGVYKGACSNLWGDHNVLIVGYGTSSDEGDYWLIRNSWGPEWGEGGYL 323

Query: 308 RMRRDVGG-AGLCGIARKASYPI 329
           R++R+     G C +A    YPI
Sbjct: 324 RLQRNFHEPTGKCAVAVAPVYPI 346


>gi|327289213|ref|XP_003229319.1| PREDICTED: cathepsin S-like [Anolis carolinensis]
          Length = 333

 Score =  234 bits (597), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 132/334 (39%), Positives = 197/334 (58%), Gaps = 20/334 (5%)

Query: 6   VTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE-- 63
           + +A+ V++    +  +    ELW  +  + Y+N+ E+ +R  I++KN RF+   N E  
Sbjct: 9   LVYAAAVIAHWEKDSMLDGHWELWKKKYNKEYQNKEEEGVRRVIWEKNLRFVMLHNLEQS 68

Query: 64  -GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSI 122
            G  +Y+L +N   D+T EE  A  TG K+P     N +  +A      PD+       +
Sbjct: 69  LGLHSYELGMNHLGDMTSEEVTALMTGLKIPVSQSRNSTLYWARQGASAPDT-------V 121

Query: 123 DWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGC 179
           DWR +G VT VKNQGSCG CW FSAV A+E   K++TG L+SLS Q ++DCS   G+ GC
Sbjct: 122 DWREKGCVTNVKNQGSCGSCWAFSAVGALECQLKLKTGNLVSLSPQNLVDCSSAFGNHGC 181

Query: 180 YGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALR 238
            GG++  AF Y+I + G+  E  YPY  + G C +     +AA    Y D+P+ +E AL+
Sbjct: 182 NGGYISAAFQYVIYNNGIDSEASYPYTGQSGTCRYNLQG-RAATCSRYVDLPSGNEAALK 240

Query: 239 YAVSR-QPVSVAIDASSPGFRYYSGGVFAGP-CGN-NLNHAVTIVGYGSSNEGPYWLIKN 295
            AV+   PVSVAIDAS P F  +  GV+  P C + ++NH V +VGYG+ +   YWL+KN
Sbjct: 241 DAVANFGPVSVAIDASRPSFFLFRKGVYDDPSCTSAHINHGVLVVGYGTEDGIDYWLVKN 300

Query: 296 SWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           SWG ++G+ G+I++ R+      CGIA + +YP+
Sbjct: 301 SWGVSFGDQGYIKIARNHDNR--CGIASQCTYPL 332


>gi|195056367|ref|XP_001995082.1| GH22826 [Drosophila grimshawi]
 gi|193899288|gb|EDV98154.1| GH22826 [Drosophila grimshawi]
          Length = 340

 Score =  234 bits (597), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 131/323 (40%), Positives = 191/323 (59%), Gaps = 16/323 (4%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNR---EGNQTYKLSLNEFA 76
           D I  + + +  +  + Y+++ E+  R KIF +N   I K N+    G  ++K+ LN++A
Sbjct: 22  DVIKEEWQTFKLEHRKQYQDETEERFRLKIFNENKHKIAKHNQLYAAGEVSFKMGLNKYA 81

Query: 77  DLTDEEFIASHTGYKMPT-RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
           D+   EF  +  G+     + +     ++    F  P+  + LP+S+DWR +GAVT VK+
Sbjct: 82  DMLHHEFHETMNGFNYTLHKQLRASDATFTGVTFISPEHVK-LPQSVDWRNKGAVTGVKD 140

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYII 192
           QG CG CW FS+  A+EG    +TG LISLSEQ ++DCS   G+ GC GG MD+AF YI 
Sbjct: 141 QGHCGSCWAFSSTGALEGQHFRKTGTLISLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIK 200

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR-QPVSVAI 250
            + G+  E+ YPY+  +  C++ +G + A   R + D+P   E  L  AV+   PVSVAI
Sbjct: 201 DNGGIDTEKSYPYEGIDDSCHFNKGTIGATD-RGFTDIPQGDEKKLAQAVATIGPVSVAI 259

Query: 251 DASSPGFRYYSGGVFAGP-CG-NNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFI 307
           DAS   F++YS GV+  P C   NL+H V +VGYG+   G  YWL+KNSWG  WG+ GFI
Sbjct: 260 DASHESFQFYSTGVYDEPQCDPQNLDHGVLVVGYGTDENGKDYWLVKNSWGTTWGDKGFI 319

Query: 308 RMRRDVGGAGLCGIARKASYPIA 330
           +M R+      CGIA  +SYP+ 
Sbjct: 320 KMARN--DDNQCGIATASSYPLV 340


>gi|402770511|gb|AFQ98390.1| cathepsin L [Rhipicephalus microplus]
 gi|402770513|gb|AFQ98391.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  234 bits (597), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 127/322 (39%), Positives = 182/322 (56%), Gaps = 37/322 (11%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEF 83
           E +     +TY++  E+ +RFKIF +N   I K N +   G  +YKL +N+F DL   EF
Sbjct: 28  EAFKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEF 87

Query: 84  IASHTGYK----------MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPV 133
                G+           +P  N+++ S                LP+ +DWR +GAVTPV
Sbjct: 88  ARIFNGHHGTRKTGGSSFLPPANVNDSS----------------LPKVVDWRKKGAVTPV 131

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSY 190
           K+QG CG CW FSA  ++EG   ++ G L+SLSEQ ++DCS   G+ GC GG M+DAF Y
Sbjct: 132 KDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKY 191

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQ-PVSVA 249
           I  + G+  E+ YPY+  +G C +++  + A      +    SE+ L+ AV+   P+SVA
Sbjct: 192 IKANDGIDTEKSYPYEAVDGECRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVA 251

Query: 250 IDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFI 307
           IDAS   F+ YS GV+  P     +L+H V +VGYG      YWL+KNSW ++WG+ G+I
Sbjct: 252 IDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYI 311

Query: 308 RMRRDVGGAGLCGIARKASYPI 329
            M RD      CGIA +ASYP+
Sbjct: 312 LMSRD--NNNQCGIASQASYPL 331


>gi|219687002|dbj|BAH08632.1| daikon cysteine protease RD21 [Raphanus sativus]
          Length = 289

 Score =  234 bits (597), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 114/216 (52%), Positives = 149/216 (68%), Gaps = 4/216 (1%)

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS- 176
           +P S+DWR  GAV  VK+QGSCG CW FS + AVEGI KI TG LISLSEQ+++DC  S 
Sbjct: 3   IPESVDWRKEGAVAAVKDQGSCGSCWAFSTIGAVEGINKIVTGDLISLSEQELVDCDTSY 62

Query: 177 -RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSE 234
            +GC GG MD AF +II++ G+  E  YPY+  +G C+  R   K   I +Y+DVP  +E
Sbjct: 63  NQGCNGGLMDYAFEFIIKNGGIDTEEDYPYKAADGRCDQNRKNAKVVTIDAYEDVPENNE 122

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIK 294
            AL+ A++ QP+SVAI+A    F+ YS GVF G CG  L+H V  VGYG+ N   YW+++
Sbjct: 123 AALKKALANQPISVAIEAGGRAFQLYSSGVFDGTCGTELDHGVVAVGYGTENGKDYWIVR 182

Query: 295 NSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPI 329
           NSWG +WGE G+I+M R++  A G CGIA +ASYPI
Sbjct: 183 NSWGGSWGESGYIKMARNIAEATGKCGIAMEASYPI 218


>gi|402770515|gb|AFQ98392.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  234 bits (596), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 127/322 (39%), Positives = 182/322 (56%), Gaps = 37/322 (11%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEF 83
           E +     +TY++  E+ +RFKIF +N   I K N +   G  +YKL +N+F DL   EF
Sbjct: 28  EAFKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEF 87

Query: 84  IASHTGYK----------MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPV 133
                G+           +P  N+++ S                LP+ +DWR +GAVTPV
Sbjct: 88  ARIFNGHHGTRKTGGSSFLPPANVNDSS----------------LPKVVDWRKKGAVTPV 131

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSY 190
           K+QG CG CW FSA  ++EG   ++ G L+SLSEQ ++DCS   G+ GC GG M+DAF Y
Sbjct: 132 KDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKY 191

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQ-PVSVA 249
           I  + G+  E+ YPY+  +G C +++  + A      +    SE+ L+ AV+   P+SVA
Sbjct: 192 IKANDGIDTEKSYPYEAVDGECRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVA 251

Query: 250 IDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFI 307
           IDAS   F+ YS GV+  P     +L+H V +VGYG      YWL+KNSW ++WG+ G+I
Sbjct: 252 IDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYI 311

Query: 308 RMRRDVGGAGLCGIARKASYPI 329
            M RD      CGIA +ASYP+
Sbjct: 312 LMSRD--NNNQCGIASQASYPL 331


>gi|308321226|gb|ADO27765.1| cathepsin S [Ictalurus furcatus]
          Length = 329

 Score =  234 bits (596), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 134/337 (39%), Positives = 194/337 (57%), Gaps = 22/337 (6%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L+  V   ++V    L + S+     +W    ++TY ++ E+  R +I+++N R I   N
Sbjct: 5   LLFTVICGAVV---ALQDPSLDMHWLMWKKNHSKTYTSELEELGRREIWERNLRLITVHN 61

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL 118
            E   G  TY L +N   D+T EE +    G ++   N++ +S  +         +   +
Sbjct: 62  LEASLGMHTYDLGMNHMGDMTREEILQMFAGTRVRP-NLTRRSSPFV------ASAGISV 114

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---G 175
           P S+DWR +G VT VKNQGSCG CW FSA  A+EG  K  TG++ SLS Q ++DCS   G
Sbjct: 115 PDSVDWREKGYVTEVKNQGSCGSCWAFSAAGALEGQLKRTTGQVKSLSPQNLVDCSSKYG 174

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SE 234
           ++GC GG+M  AF Y+I   G+  +  YPY   +G C + + + +AA   SY  V    E
Sbjct: 175 NKGCNGGFMTQAFQYVIDDGGIDSDEAYPYTAMDGQCRYDQ-SQRAANCSSYNYVSEGDE 233

Query: 235 LALRYAVSR-QPVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPYWL 292
            AL+ AV+   P+SVAIDA+ P F  Y  GV++ P C  N+NH V +VGYGS N   YWL
Sbjct: 234 EALKQAVATIGPISVAIDATRPMFILYHSGVYSDPTCTQNVNHGVLVVGYGSLNGEDYWL 293

Query: 293 IKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           +KNSWG  +G+GG+IR+ R+ G   +CGIA  A YP+
Sbjct: 294 VKNSWGTRFGDGGYIRIARNKG--NMCGIANYACYPL 328


>gi|1149525|emb|CAA64218.1| preprocathepsin K [Mus musculus]
          Length = 329

 Score =  234 bits (596), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 129/336 (38%), Positives = 203/336 (60%), Gaps = 20/336 (5%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           + ++++   S  +S    E+ +  + ELW     + Y ++ ++  R  I++KN + I   
Sbjct: 4   LKVLLLPMVSFALSP---EEMLDTQWELWKKTHQKQYNSKVDEISRRLIWEKNLKQISAH 60

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N E   G  TY+L++N   D+T EE +   TG ++P       S+SY+N+    P+    
Sbjct: 61  NLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLRIPP------SRSYSNDTLYTPEWEGR 114

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGS 176
           +P SID+R +G VTPVKNQG CG CW FS+  A+EG  K +TG+L++LS Q ++DC + +
Sbjct: 115 VPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTEN 174

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SEL 235
            GC GG+M  AF Y+ ++ G+  E  +PY  ++  C +   A KAA+ R Y+++P  +E 
Sbjct: 175 YGCGGGYMTTAFQYVQQNGGIDSEDAFPYVGQDESCMYNATA-KAAKCRGYREIPVGNEK 233

Query: 236 ALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CG-NNLNHAVTIVGYGSSNEGPYWL 292
           AL+ AV+R  P+SV+IDAS   F++YS GV+    C  +N+NHAV +VGYG+     +W+
Sbjct: 234 ALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQKGSKHWI 293

Query: 293 IKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           IKNSWG++WG  G+  + R+   A  CGI   AS+P
Sbjct: 294 IKNSWGESWGNKGYALLARNKNNA--CGITNMASFP 327


>gi|126681066|gb|ABO26562.1| cathepsin L-like cysteine protease [Ixodes ricinus]
          Length = 335

 Score =  234 bits (596), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 124/324 (38%), Positives = 192/324 (59%), Gaps = 18/324 (5%)

Query: 18  HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNE 74
           +++ + A+   + A+  ++Y ++ E+  R KI+ +N   I K N +   G   Y +++NE
Sbjct: 19  YQEVLGAEWSAFKAKHGKSYVSETEEVFRLKIYMENRHKIAKHNEKYARGEVPYSMAMNE 78

Query: 75  FADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRR--GLPRSIDWRARGAVTP 132
           F D+   EF+++  G+K   ++   +  +Y       P++     LP+++DWR +GAVTP
Sbjct: 79  FGDMLHHEFVSTRNGFKRNYKDQPREGSTYLE-----PENIEDFSLPKTVDWRTKGAVTP 133

Query: 133 VKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFS 189
           VKNQG CG CW FSA  ++EG    ++G ++SLSEQ ++ CS   G+ GC GG MDDAF 
Sbjct: 134 VKNQGQCGSCWAFSATGSLEGQHFRKSGSMVSLSEQNLVGCSTDFGNNGCEGGLMDDAFK 193

Query: 190 YIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSR-QPVSV 248
           YI  ++G+  E+ YPY   +G C++++  + A           SE  L+ AV+   P+SV
Sbjct: 194 YIRANKGIDTEKSYPYNGTDGTCHFKKSTVGATDSGFVDIKEGSETQLKKAVATVGPISV 253

Query: 249 AIDASSPGFRYYSGGVFAGP-CGN-NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGF 306
           AIDAS   F++YS GV+  P C + +L+H V +VGYG+ N   YW +KNSWG  WG+ G+
Sbjct: 254 AIDASHESFQFYSDGVYDEPECDSESLDHGVLVVGYGTLNGTDYWFVKNSWGTTWGDEGY 313

Query: 307 IRMRRDVGGAGLCGIARKASYPIA 330
           IRM R+      CGIA  AS P+ 
Sbjct: 314 IRMSRNK--KNQCGIASSASIPLV 335


>gi|390337645|ref|XP_001199228.2| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  234 bits (596), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 136/339 (40%), Positives = 203/339 (59%), Gaps = 21/339 (6%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L+ +   +SL MS T  ++        W  +  + Y +  E+A R  I++KN   + + 
Sbjct: 7   LLVAVCVVSSLSMSFTDFDEDWKE----WKNEHGKRYLSDEEEASRRLIWQKNLDIVIRH 62

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N +   G+ TY L +N+FADL ++EF+A  TG++     ++  S++   + F  P++   
Sbjct: 63  NLKYDLGHFTYDLGMNQFADLQNKEFVAMMTGFR-----VNGTSKAAKGSTFLPPNNVGK 117

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR 177
           LP+++DWR +G VTPVK+QG CG CW FSA  ++EG    +TG+L+SLSEQ ++DCS   
Sbjct: 118 LPKTVDWRTKGYVTPVKDQGQCGSCWAFSATGSLEGQHFKKTGKLVSLSEQNLVDCSDKN 177

Query: 178 -GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SEL 235
            GC GG MD AF YII + G+  E  YPY   +G C++ + A   A +  Y DV + SE 
Sbjct: 178 YGCNGGLMDRAFQYIIDAGGIDTEESYPYIAMDGNCHF-KTANVGATVTGYTDVTSGSEK 236

Query: 236 ALRYAVSR-QPVSVAIDASSPGFRYYSGGVFAGP-CGNN-LNHAVTIVGYGSSNEGP-YW 291
           AL+ AV+   P+SVAIDAS   F+ Y  GV+  P C +  L+H V  VGYG++ +G  YW
Sbjct: 237 ALQKAVAHIGPISVAIDASHFSFQLYQSGVYNEPGCSSTLLDHGVLAVGYGTTIDGTDYW 296

Query: 292 LIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           ++KNSW + WG  G+I M R+      CGIA +ASYP+ 
Sbjct: 297 IVKNSWAETWGMNGYIWMSRNKDNQ--CGIATQASYPLV 333


>gi|402770517|gb|AFQ98393.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  234 bits (596), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 127/322 (39%), Positives = 182/322 (56%), Gaps = 37/322 (11%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEF 83
           E +     +TY++  E+ +RFKIF +N   I K N +   G  +YKL +N+F DL   EF
Sbjct: 28  EAFKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEF 87

Query: 84  IASHTGYK----------MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPV 133
                G+           +P  N+++ S                LP+ +DWR +GAVTPV
Sbjct: 88  ARIFNGHHGTRKTGGSSFLPPANVNDSS----------------LPKVVDWRKKGAVTPV 131

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSY 190
           K+QG CG CW FSA  ++EG   ++ G L+SLSEQ ++DCS   G+ GC GG M+DAF Y
Sbjct: 132 KDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKY 191

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQ-PVSVA 249
           I  + G+  E+ YPY+  +G C +++  + A      +    SE+ L+ AV+   P+SVA
Sbjct: 192 IKANDGIDTEKSYPYKAVDGECRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVA 251

Query: 250 IDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFI 307
           IDAS   F+ YS GV+  P     +L+H V +VGYG      YWL+KNSW ++WG+ G+I
Sbjct: 252 IDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYI 311

Query: 308 RMRRDVGGAGLCGIARKASYPI 329
            M RD      CGIA +ASYP+
Sbjct: 312 LMSRD--NNNQCGIASQASYPL 331


>gi|157132324|ref|XP_001655999.1| cathepsin l [Aedes aegypti]
 gi|108881694|gb|EAT45919.1| AAEL002833-PA [Aedes aegypti]
          Length = 339

 Score =  233 bits (595), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 132/341 (38%), Positives = 202/341 (59%), Gaps = 15/341 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +LI+++ + +   + +L+E  +  +   +  Q  + Y ++ E+ +R KI+ +N   I K 
Sbjct: 3   ILILLMAFVAAANAVSLYE-LVKEEWNAFKLQHRKNYDSETEERIRLKIYVQNKHKIAKH 61

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N+    G + Y+L +N++ADL  EEF+ +  G+       S +             +   
Sbjct: 62  NQRFDLGQEKYRLRVNKYADLLHEEFVQTVNGFNRTDSKKSLKGVRIEEPVTFIEPANVE 121

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           +P ++DWR +GAVTPVK+QG CG CW FSA  A+EG    +TG+L+SLSEQ ++DCS   
Sbjct: 122 VPTTVDWRKKGAVTPVKDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSGKY 181

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-S 233
           G+ GC GG MD AF YI  + G+  E+ YPY+  +  C++   A+ A   + Y D+P   
Sbjct: 182 GNNGCNGGMMDYAFQYIKDNGGIDTEKSYPYEAIDDTCHFNPKAVGATD-KGYVDIPQGD 240

Query: 234 ELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGN-NLNHAVTIVGYGSSNEGP- 289
           E AL+ A++   PVS+AIDAS   F++YS GV+  P C + NL+H V  VGYG+S EG  
Sbjct: 241 EEALKKALATVGPVSIAIDASHESFQFYSEGVYYEPQCDSENLDHGVLAVGYGTSEEGED 300

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           YWL+KNSWG  WG+ G+++M R+      CG+A  ASYP+ 
Sbjct: 301 YWLVKNSWGTTWGDQGYVKMARNRDNH--CGVATCASYPLV 339


>gi|351705687|gb|EHB08606.1| Cathepsin S [Heterocephalus glaber]
          Length = 331

 Score =  233 bits (595), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 132/326 (40%), Positives = 191/326 (58%), Gaps = 28/326 (8%)

Query: 17  LHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSL 72
           L +D +   H  LW     + Y+ + E+ +R  I++KN +F+   N E   G  +Y L +
Sbjct: 18  LQQDPMLDYHWHLWKKTYGKHYQEKNEEQVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGM 77

Query: 73  NEFADLTDEEFIASHTGYKMP---TRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGA 129
           N   D+T EE  +  +  ++P    RN++ +S           D  + LP S+DWR +G 
Sbjct: 78  NHLGDMTSEEVRSLMSSLRVPRQWLRNVTYKS-----------DPNQKLPDSVDWREKGC 126

Query: 130 VTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG----SRGCYGGWMD 185
           VT VK QG+CG CW FSAV A+EG  K++TG+L+SLS Q ++DCS     ++GC GG+M 
Sbjct: 127 VTEVKYQGACGSCWAFSAVGALEGQLKLKTGKLVSLSAQNLVDCSTEKYRNKGCSGGFMT 186

Query: 186 DAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ 244
           +AF Y+I + G+  E  YPY+  +  C++     +AA    Y ++P  SE AL+ AV+ +
Sbjct: 187 EAFQYVIDNNGIDSETSYPYKATDEKCHYD-SKNRAATCSRYTELPYGSEEALKEAVANK 245

Query: 245 -PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
            PVSVA+DAS P F  Y  GV+  P C  N+ H V  VGYG+ N   YWL+KNSWG  +G
Sbjct: 246 GPVSVAVDASRPSFFLYKNGVYDDPSCTQNVTHGVLAVGYGNLNGKDYWLVKNSWGLYFG 305

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYP 328
           + G+IRM R+ G    CGIA  +SYP
Sbjct: 306 DQGYIRMARNKGNH--CGIASYSSYP 329


>gi|402770501|gb|AFQ98385.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  233 bits (595), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 127/322 (39%), Positives = 182/322 (56%), Gaps = 37/322 (11%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEF 83
           E +     +TY++  E+ +RFKIF +N   I K N +   G  +YKL +N+F DL   EF
Sbjct: 28  EAFKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEF 87

Query: 84  IASHTGYK----------MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPV 133
                G+           +P  N+++ S                LP+++DWR +GAVTPV
Sbjct: 88  ARIFNGHHGTRKTGGSTFLPPANVNDSS----------------LPKAVDWRKKGAVTPV 131

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSY 190
           K+QG CG CW FSA  ++EG   ++ G L+SLSEQ ++DCS   G+ GC GG M+DAF Y
Sbjct: 132 KDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKY 191

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQ-PVSVA 249
           I  + G+  E+ YPY+  +G C +++  + A      +    SE  L+ AV+   P+SVA
Sbjct: 192 IKANDGIDTEKSYPYEAVDGECRFKKEDVGATDTGYVEIKAGSEDDLKKAVATVGPISVA 251

Query: 250 IDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFI 307
           IDAS   F+ YS GV+  P     +L+H V +VGYG      YWL+KNSW ++WG+ G+I
Sbjct: 252 IDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYI 311

Query: 308 RMRRDVGGAGLCGIARKASYPI 329
            M RD      CGIA +ASYP+
Sbjct: 312 LMSRD--NNNQCGIASQASYPL 331


>gi|2098464|pdb|1PCI|A Chain A, Procaricain
 gi|2098465|pdb|1PCI|B Chain B, Procaricain
 gi|2098466|pdb|1PCI|C Chain C, Procaricain
          Length = 322

 Score =  233 bits (594), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 130/303 (42%), Positives = 187/303 (61%), Gaps = 11/303 (3%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           WM    + Y+N  EK  RF+IFK N  +I++ N++ N +Y L LNEFADL+++EF   + 
Sbjct: 25  WMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKK-NNSYWLGLNEFADLSNDEFNEKYV 83

Query: 89  GYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAV 148
           G  +     +   QSY   +    +    LP ++DWR +GAVTPV++QGSCG CW FSAV
Sbjct: 84  GSLID----ATIEQSYDEEFIN--EDIVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAV 137

Query: 149 AAVEGITKIRTGRLISLSEQQVLDCS-GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQR 207
           A VEGI KIRTG+L+ LSEQ+++DC   S GC GG+   A  Y+ ++ G+     YPY+ 
Sbjct: 138 ATVEGINKIRTGKLVELSEQELVDCERRSHGCKGGYPPYALEYVAKN-GIHLRSKYPYKA 196

Query: 208 REGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFA 266
           ++G C  ++      +      V P +E  L  A+++QPVSV +++    F+ Y GG+F 
Sbjct: 197 KQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFE 256

Query: 267 GPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKA 325
           GPCG  ++ AVT VGYG S    Y LIKNSWG  WGE G+IR++R  G + G+CG+ + +
Sbjct: 257 GPCGTKVDGAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSS 316

Query: 326 SYP 328
            YP
Sbjct: 317 YYP 319


>gi|195124431|ref|XP_002006696.1| GI21205 [Drosophila mojavensis]
 gi|193911764|gb|EDW10631.1| GI21205 [Drosophila mojavensis]
          Length = 339

 Score =  233 bits (594), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 129/322 (40%), Positives = 192/322 (59%), Gaps = 16/322 (4%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFA 76
           D I  +   +  +  +TY+++ E+  R KIF +N   I K N+    G  T+K+++N++A
Sbjct: 21  DVIKEEWHTFKLEHRKTYQDETEERFRLKIFNENKHKIAKHNQRYATGEVTFKMAVNKYA 80

Query: 77  DLTDEEFIASHTGYKMPT-RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
           D+   EF  +  G+     + +     S+    F  P +   LP+S+DWR +GAVT VK+
Sbjct: 81  DMLHHEFRETMNGFNYTLHKELRASDPSFTGITFISP-AHVKLPKSVDWREKGAVTAVKD 139

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYII 192
           QG CG CW FS+  A+EG    +TG L+SLSEQ ++DCS   G+ GC GG MD+AF YI 
Sbjct: 140 QGHCGSCWAFSSTGALEGQHFRKTGTLVSLSEQNLVDCSAKYGNNGCNGGLMDNAFRYIK 199

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR-QPVSVAI 250
            + G+  E+ YPY+  +  C++ + ++ A   R + D+P  +E  +  AV+   PVSVAI
Sbjct: 200 DNGGIDTEKSYPYEGIDDSCHFNKDSVGATD-RGFADIPQGNEKKMAEAVATIGPVSVAI 258

Query: 251 DASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFI 307
           DAS   F++YS G++  P  N  NL+H V +VGYG+   G  YWL+KNSWG  WG+ GFI
Sbjct: 259 DASHESFQFYSEGIYNEPECNSQNLDHGVLVVGYGTDESGKDYWLVKNSWGTTWGDKGFI 318

Query: 308 RMRRDVGGAGLCGIARKASYPI 329
           +M R+      CGIA  +SYP+
Sbjct: 319 KMARNEDNQ--CGIASASSYPL 338


>gi|327289219|ref|XP_003229322.1| PREDICTED: cathepsin K-like, partial [Anolis carolinensis]
          Length = 289

 Score =  233 bits (594), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 124/295 (42%), Positives = 186/295 (63%), Gaps = 17/295 (5%)

Query: 42  EKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNIS 98
           E+  R +I++KN ++I   N E   G  T++L++N   D+T EE +   TG K+P     
Sbjct: 2   EEVSRRQIWEKNLKYINTHNLEFSLGRHTFELAMNHLGDMTSEELVQKMTGLKVPL---- 57

Query: 99  NQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIR 158
             S+  +N+    PD    +P ++D+R +G VTPVKNQG CG CW FS+V A+E   K++
Sbjct: 58  --SRKPSNDTLYIPDWEERVPDAVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEAQLKMK 115

Query: 159 TGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRG 217
           TG+L++LS Q ++DC S + GC GG+M +AF Y+  ++G+  +  YPY  ++  C +   
Sbjct: 116 TGKLLNLSPQNLVDCVSNNDGCGGGYMTNAFEYVHVNRGIDSDDTYPYIGQDENCMYNPT 175

Query: 218 AMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGPCGN--NL 273
             KAA+ R Y+++P   E AL+ AV+R+ PVSV IDAS   F++YS GV+     N  N+
Sbjct: 176 G-KAAKCRGYKEIPEGDEKALKRAVARKGPVSVGIDASLASFQFYSRGVYYDENCNADNI 234

Query: 274 NHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           NHAV  VGYGS     +W++KNSWG++WG+ G+I M R++  A  CGIA  AS+P
Sbjct: 235 NHAVLAVGYGSQKGTKHWIVKNSWGEDWGDKGYILMARNMNNA--CGIANLASFP 287


>gi|297818854|ref|XP_002877310.1| hypothetical protein ARALYDRAFT_484828 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323148|gb|EFH53569.1| hypothetical protein ARALYDRAFT_484828 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 376

 Score =  233 bits (594), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 133/322 (41%), Positives = 190/322 (59%), Gaps = 18/322 (5%)

Query: 18  HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFAD 77
           +E  +   +E W+ +  + Y    EK  RFKIFK N + IE+ N + N++Y   LN+F+D
Sbjct: 33  NEAEVRTIYERWLVEHGKNYNGLGEKERRFKIFKDNLKHIEEHNSDPNRSYDRGLNQFSD 92

Query: 78  LTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTP-VKNQ 136
           LT +EF AS+ G K+  +++S+ ++ Y      Y +    LP  +DWR RGAV P VK Q
Sbjct: 93  LTVDEFQASYLGGKIEKKSLSDVAERYQ-----YKEGDI-LPDEVDWRERGAVVPRVKRQ 146

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR---GCYGGWMDDAFSYIIR 193
           G CG CW F+A  AVEGI +I TG L+SLSEQ+++DC   +   GC GG    AF +I  
Sbjct: 147 GDCGSCWAFAATGAVEGINQITTGELLSLSEQELIDCDRGKDNFGCAGGGAVWAFEFIKE 206

Query: 194 SQGLTDERVYPYQRRE-GYCN-WQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAI 250
           + G+  +  Y Y   +   C   +    +   I  ++ VP + E++L+ AVS QP+SV I
Sbjct: 207 NGGIVTDEDYGYTGDDTAACKAIEMKTTRVVTINGHEVVPVNDEMSLKKAVSYQPISVMI 266

Query: 251 DASSPGFRYYSGGVFAGPCGNNL-NHAVTIVGYG-SSNEGPYWLIKNSWGQNWGEGGFIR 308
            A++     Y  GV+ GPC N   +H V IVGYG SS+EG YWLI+NSWG  WGEGG++R
Sbjct: 267 SAAN--MSDYKSGVYKGPCSNLWGDHNVLIVGYGTSSDEGDYWLIRNSWGPGWGEGGYLR 324

Query: 309 MRRDVGG-AGLCGIARKASYPI 329
           ++R+     G C +A    YPI
Sbjct: 325 LQRNFNEPTGKCAVAVAPVYPI 346


>gi|194352766|emb|CAQ00111.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
          Length = 384

 Score =  233 bits (594), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 134/331 (40%), Positives = 182/331 (54%), Gaps = 32/331 (9%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           WMA   R+Y    EK  RF++++ N  FIE  NR+   +Y L    F DLT +EF+A ++
Sbjct: 55  WMAAHGRSYPTVEEKLRRFEVYRSNMEFIEAANRDSRMSYSLGETPFTDLTHDEFMAMYS 114

Query: 89  G------YKMPTRNISNQSQSYANNWFGYPDSRRG-------LPRSIDWRARGAVTPVKN 135
                  ++  T   +     +          RR        LP S+DWRA+G VTP KN
Sbjct: 115 SNDDSSEWEEATVITTRAGPVHEGTAAVEEPPRRTNLNVTAVLPPSVDWRAKGVVTPAKN 174

Query: 136 QG-SCGCCWIFSAVAAVEGITKIRTG-RLISLSEQQVLDCSG-SRGCYGGWMDDAFSYII 192
           QG +C  CW F++VA +E    I TG     LSEQQ++DCS    GC  GWMDDAF ++I
Sbjct: 175 QGATCFSCWAFTSVATMESAQAISTGGSPPVLSEQQLVDCSTLHHGCGRGWMDDAFKWVI 234

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV--PTSELALRYAVSRQPVSVAI 250
            + G+T E  YPY  + G C  Q G   A R+RSY+ V  P +E  L+ AV++QPV+V+ 
Sbjct: 235 MNGGITTEAAYPYTGKAGNC--QTGKPVAVRLRSYKKVTPPGNEAGLKEAVAQQPVAVSF 292

Query: 251 DASSPGFRYYSGGVF-----------AGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWG 298
           D S P F++Y GGV+            G C    NHA+ +VGYG+  +G  YW+ KNSW 
Sbjct: 293 DYSDPCFQHYIGGVYNAGCSRSGVYIKGACKTAQNHAMALVGYGTKPDGTKYWIGKNSWT 352

Query: 299 QNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
             WG+ GFI + RD    GLCG+A+   YPI
Sbjct: 353 AKWGDKGFIYLLRDSPPLGLCGLAKLPVYPI 383


>gi|194883222|ref|XP_001975702.1| GG20414 [Drosophila erecta]
 gi|190658889|gb|EDV56102.1| GG20414 [Drosophila erecta]
          Length = 341

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 129/308 (41%), Positives = 186/308 (60%), Gaps = 16/308 (5%)

Query: 35  RTYKNQAEKAMRFKIFKKNFRFIEKFNR---EGNQTYKLSLNEFADLTDEEFIASHTGYK 91
           + Y++  E+  R KIF +N   I K N+   EG  ++KL++N++ADL   EF     G+ 
Sbjct: 38  KNYQDDTEERFRLKIFNENKHKIAKHNQRYAEGKVSFKLAVNKYADLLHHEFRQLMNGFN 97

Query: 92  MPT-RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAA 150
               + + +   S+    F  P +   LP+S+DWR +GAVT VK+QG CG CW FS+  A
Sbjct: 98  YTLHKQLRSTDDSFKGVTFISP-AHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGA 156

Query: 151 VEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQR 207
           +EG    ++G L+SLSEQ ++DCS   G+ GC GG MD+AF YI  + G+  E+ YPY+ 
Sbjct: 157 LEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEA 216

Query: 208 REGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVF 265
            +  C++ +GA+ A   R + D+P   E  +  AV+   PV+VAIDAS   F++YS GV+
Sbjct: 217 IDDSCHFNKGAIGATD-RGFTDIPQGDEKKMAEAVATVGPVAVAIDASHESFQFYSEGVY 275

Query: 266 AGP-C-GNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIA 322
             P C   NL+H V +VGYG+   G  YWL+KNSWG  WG+ GFI+M R+      CGIA
Sbjct: 276 NEPQCDAQNLDHGVLVVGYGTDESGDDYWLVKNSWGTTWGDKGFIKMLRNKDNQ--CGIA 333

Query: 323 RKASYPIA 330
             +SYP+ 
Sbjct: 334 SASSYPLV 341


>gi|291224870|ref|XP_002732425.1| PREDICTED: cathepsin L2-like [Saccoglossus kowalevskii]
          Length = 326

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 138/337 (40%), Positives = 193/337 (57%), Gaps = 22/337 (6%)

Query: 5   MVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE- 63
           M  + SL +       S++ + E W     + Y  Q E+A+R  I+  N + I+  N + 
Sbjct: 1   MKMFISLALVAMAAATSVNTEWESWKRTYGKEY-TQKEEALRHMIWNVNLKMIQMHNEKY 59

Query: 64  --GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRS 121
             G  TY  ++N+F DLT+EE+     GYK   + + ++  +     F  P + R  P S
Sbjct: 60  MSGKSTYTQNMNQFGDLTNEEYRELMCGYKKSNKTVISKPST-----FLLPSNYRA-PAS 113

Query: 122 IDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRG 178
           IDWR +G VT VK+QG+CG CW FS+  ++EG T  +TG+L+ LSEQQ++DCS   G+ G
Sbjct: 114 IDWRTQGYVTDVKDQGACGSCWAFSSTGSLEGQTFKKTGKLVPLSEQQLVDCSGDYGNMG 173

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELAL 237
           C GGWMD AFSY I+ +G   E  YPY   +  C +    + A     Y D+P   E AL
Sbjct: 174 CGGGWMDQAFSY-IKDKGEESEDGYPYTGTDDTCVYDASKVVATDT-GYTDIPEMDENAL 231

Query: 238 RYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CG-NNLNHAVTIVGYGSSNEG-PYWLI 293
           + AV+   P+SVAIDA+   F++Y  GV+  P C   NL+HAV  VGYG+S EG  YW++
Sbjct: 232 QQAVATVGPISVAIDATHSSFQFYESGVYDEPECSQTNLDHAVLAVGYGTSEEGLDYWIV 291

Query: 294 KNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           KNSW   WG  G+I M R+      CGIA KASYP+ 
Sbjct: 292 KNSWSTGWGMQGYIEMSRNKDNQ--CGIASKASYPVV 326


>gi|186701255|gb|ACC91281.1| putative cysteine proteinase [Capsella rubella]
          Length = 324

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 132/340 (38%), Positives = 192/340 (56%), Gaps = 45/340 (13%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHEL------WMAQSARTYKNQ-AEKAMRFKIFKKN 53
           +LII +   S  M  ++    + +  E+      WM++  +TY N   +K  RF+ FK N
Sbjct: 14  LLIIFLLPPSSAMDLSVTSGGLRSNEEVGFIFQTWMSKHGKTYTNALGDKEQRFQNFKDN 73

Query: 54  FRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPD 113
            RFI++ N + N +Y+L L +FADLT +E+    +G  +  +     +  Y       P 
Sbjct: 74  LRFIDQHNAK-NLSYRLGLTQFADLTVQEYQDLFSGRPIQKQKALRVTHRYV------PL 126

Query: 114 SRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
           +   LP+S+DWR +GAV+ +K+QG C           VE I KI TG LISLSEQ+++DC
Sbjct: 127 AEDQLPQSVDWRQKGAVSEIKDQGRC----------TVESINKIVTGELISLSEQELVDC 176

Query: 174 S-GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNW-QRGAMKAARIRSYQDVP 231
           S  + GC GG MD AF ++I + GL  +  YPYQ  +GYCN  Q  + K  +I  Y+DVP
Sbjct: 177 SIDNHGCNGGLMDSAFQFLINNNGLEYQSDYPYQAVQGYCNHNQNTSKKVIKIDGYEDVP 236

Query: 232 -TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPY 290
             +E +L+ AV+ QP                 G++ GPCG +L+HAV IVGYG+ N   Y
Sbjct: 237 ANNENSLQKAVAHQP-----------------GIYTGPCGTDLDHAVVIVGYGTENGQDY 279

Query: 291 WLIKNSWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYPI 329
           W+++NSWG  WGE G+ ++ R+     G+CGIA  ASYPI
Sbjct: 280 WIVRNSWGTVWGEAGYAKIARNFENPTGVCGIAMVASYPI 319


>gi|402770499|gb|AFQ98384.1| cathepsin L, partial [Hyalomma anatolicum anatolicum]
          Length = 312

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 128/322 (39%), Positives = 180/322 (55%), Gaps = 37/322 (11%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEF 83
           E +     ++Y+++ E+ +R+KIF +N   I K N +   G  +YKL +N+F DL   EF
Sbjct: 8   EAFKTTHKKSYQSKMEELLRYKIFTENSLLIAKHNAKYAKGLVSYKLGMNQFGDLLPHEF 67

Query: 84  IASHTGYK----------MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPV 133
                GY           +P  N+++ S                LP+++DWR +GAVTPV
Sbjct: 68  AKMFNGYHGERKGRGSTFLPPANVNDSS----------------LPKTVDWRKKGAVTPV 111

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---RGCYGGWMDDAFSY 190
           K+QG CG CW FSA  ++EG   +++G+L+SLSEQ ++DCSGS    GC GG MD+AF Y
Sbjct: 112 KDQGQCGSCWAFSATGSLEGQHFLKSGKLVSLSEQNLIDCSGSFGNEGCGGGLMDNAFKY 171

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSR-QPVSVA 249
           I  + G+  E  YPY+  +G C +++  + A           SE  L+ AV+   P+SVA
Sbjct: 172 IKANDGIDTEESYPYEAMDGDCRFKKEDVGATDTGFVDIQQGSEDDLQKAVATVGPISVA 231

Query: 250 IDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFI 307
           IDAS   F+ YS GV+  P      L+H V  VGYG  N   YWL+KNSW + WG+ G+I
Sbjct: 232 IDASHSSFQLYSEGVYDEPNCSSEELDHGVLAVGYGVKNGKKYWLVKNSWAETWGDNGYI 291

Query: 308 RMRRDVGGAGLCGIARKASYPI 329
            M RD      CGIA  ASYP+
Sbjct: 292 LMSRDKDNQ--CGIASSASYPL 311


>gi|449679414|ref|XP_002161570.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 353

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/343 (39%), Positives = 198/343 (57%), Gaps = 23/343 (6%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELW---MAQSARTYKNQAEKAMRFKIFKKNFRFI 57
           ++ I++   S  +   L +     K+  W     +  + Y NQ E+  ++  +KKN   I
Sbjct: 21  LIAILLQSYSFELHSFLDDPQTPMKNPEWRRFKIKFGKFYSNQDEETSKYLNWKKNNENI 80

Query: 58  EKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
              N E N ++++ +N+F+DLT EEF+  H G    +++I N ++      F  P+ +  
Sbjct: 81  INHNSE-NHSFEIGINQFSDLTHEEFMKIHGGCLKLSKSIVNFTKE-----FSLPN-KVN 133

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           +P  +DWR  G VTPVKNQG C  CW FS   A+EG T  +TG L +LSEQ ++DCS   
Sbjct: 134 IPDKVDWRTEGYVTPVKNQGLCRSCWAFSTTGALEGQTFRKTGILPTLSEQNLVDCSKSY 193

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRRE-GYCNWQRGAMKAARIRSYQDVPT- 232
           G++GC GGW ++AF YI  + GL  E  YPY  +E GYC +     K A    + ++P  
Sbjct: 194 GNQGCDGGWTNNAFEYIKDNDGLDSENGYPYDAKELGYCYYDE-KYKEASDSGFVEIPYG 252

Query: 233 SELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGN---NLNHAVTIVGYGSSNE 287
            E AL+ AV+   P++V IDAS P F+ Y  GV+  P CGN   NL HAV +VGYG+   
Sbjct: 253 DEDALKEAVATVGPIAVNIDASKPSFQSYKSGVYNEPTCGNGITNLTHAVLVVGYGTEKG 312

Query: 288 GPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
             +WL+KNSWG+ WG+ G+I+M R+   +  CGIA +AS+P+ 
Sbjct: 313 HKFWLVKNSWGKTWGDHGYIKMSRN--KSNQCGIATRASFPLV 353


>gi|395856029|ref|XP_003800445.1| PREDICTED: cathepsin S [Otolemur garnettii]
          Length = 331

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/340 (40%), Positives = 190/340 (55%), Gaps = 31/340 (9%)

Query: 6   VTWASLVMSRT---LHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           + W  LV       LH D     H  LW     + Y  + E+  R  I++KN +F+   N
Sbjct: 4   LVWTLLVCCSAMAQLHRDPALDHHWHLWKKTYGKQYTEKNEETERRLIWEKNLKFVMLHN 63

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMP---TRNISNQSQSYANNWFGYPDSR 115
            E   G  +Y L +N   D+T EE ++  T  K+P    RN++ +S          P+ +
Sbjct: 64  LEHSMGMHSYDLGMNHLGDMTSEEVVSLMTCLKVPRQSQRNVTYKSS---------PNQK 114

Query: 116 RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG 175
             LP S+DWR +G VT VK QGSCG CW FSAV A+E   K+ TG+L+SLS Q ++DCS 
Sbjct: 115 --LPDSLDWREKGCVTEVKYQGSCGSCWAFSAVGALEAQLKLTTGKLVSLSAQNLVDCST 172

Query: 176 SR----GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP 231
            +    GC+GG+M +AF YII + G+  E  YPY+  +  C +     +AA    Y ++P
Sbjct: 173 EKYRNEGCHGGFMTEAFQYIIDNNGIDSEASYPYKAMDEKCQYD-SKNRAATCSKYTELP 231

Query: 232 T-SELALRYAV-SRQPVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEG 288
             SE AL+ AV S+ PVSVAIDAS   F  Y  GV+  P C   +NH V +VGYG+ N  
Sbjct: 232 FGSEEALKEAVASKGPVSVAIDASHSSFFLYRSGVYYEPACTQVVNHGVLVVGYGNLNGN 291

Query: 289 PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
            YWL+KNSWG  +G+ G+IRM R+      CGIA  +SYP
Sbjct: 292 DYWLVKNSWGLYFGDKGYIRMARN--RENHCGIASYSSYP 329


>gi|125564712|gb|EAZ10092.1| hypothetical protein OsI_32402 [Oryza sativa Indica Group]
          Length = 382

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/328 (39%), Positives = 183/328 (55%), Gaps = 28/328 (8%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           W A+  R+Y    E+  R +++ +N R+IE  N      Y+L    + DLT++EF+A +T
Sbjct: 55  WKAEYNRSYATPEEERRRLRVYARNVRYIEATNAAAGLAYELGETAYTDLTNDEFMAMYT 114

Query: 89  GYKMPTRNISNQSQSYANNWFG-------------YPDSRRGLPRSIDWRARGAVTPVKN 135
              + +    +   +                    Y +   G P S+DWRA GAVT VK+
Sbjct: 115 APPLRSAADDDDDAATTTIITTRAGPVDEHQQPEVYFNESAGAPASVDWRASGAVTEVKD 174

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRS 194
           QG CG CW FS VA VEGI KI+ G+L+SLSEQ+++DC     GC GG    A  +I  +
Sbjct: 175 QGRCGSCWAFSTVAVVEGIQKIKKGKLVSLSEQELVDCDTLDSGCDGGVSYRALEWITAN 234

Query: 195 QGLTDERVYPYQ-RREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDA 252
            G+T    YPY       C+  +    AA I   + V T SE +L+ A + QPV+V+I+A
Sbjct: 235 GGITTRDDYPYTGAAAAACDRAKLGHHAATIAGLRRVATRSEASLQNAAAAQPVAVSIEA 294

Query: 253 SSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP---------YWLIKNSWGQNWGE 303
               F++Y  GV+ GPCG  LNH VT+VGYG   E P         YW+IKNSWG+NWG+
Sbjct: 295 GGDNFQHYRKGVYDGPCGTRLNHGVTVVGYG-QEEAPVDGSAAGDKYWIIKNSWGKNWGD 353

Query: 304 GGFIRMRRDVGG--AGLCGIARKASYPI 329
            G+I+M++DV G   GLCGIA + S+P+
Sbjct: 354 QGYIKMKKDVAGKPEGLCGIAIRPSFPL 381


>gi|401397136|ref|XP_003879989.1| cathepsin L, related [Neospora caninum Liverpool]
 gi|325114397|emb|CBZ49954.1| cathepsin L, related [Neospora caninum Liverpool]
          Length = 415

 Score =  233 bits (593), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 119/285 (41%), Positives = 171/285 (60%), Gaps = 12/285 (4%)

Query: 31  AQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGY 90
           A   ++Y  + E   R+ IFK N  +I   N++G  +Y L +N F DL+ EEF   + GY
Sbjct: 124 ATYGKSYATEEETQKRYAIFKNNLAYIHTHNQQG-YSYSLKMNHFGDLSREEFRRKYLGY 182

Query: 91  KMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAA 150
              +RN+ + +   A        S   +P ++DWR +G VTPVK+Q  CG CW FSA  A
Sbjct: 183 N-KSRNLKSNNLGVATELLKVSPSD--VPSAVDWREKGCVTPVKDQRDCGSCWAFSATGA 239

Query: 151 VEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQR 207
           +EG    +TG L+SLSEQ+++DCS   G++GC GG M+DAF Y++ S GL  E  YPY  
Sbjct: 240 LEGAHCAKTGELLSLSEQELVDCSLAEGNQGCSGGEMNDAFQYVVDSGGLCSEEGYPYLA 299

Query: 208 REGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFA 266
           R+G C  +R   K   I  ++DVP  SE A++ A++  PVS+AI+A    F++Y  GVF 
Sbjct: 300 RDGEC--KRACKKVVTISGFKDVPRKSETAMKAALAHSPVSIAIEADQLPFQFYHEGVFD 357

Query: 267 GPCGNNLNHAVTIVGYGSSNEGP--YWLIKNSWGQNWGEGGFIRM 309
             CG +L+H V +VGYG+  E    +W++KNSWG  WG  G++ M
Sbjct: 358 ASCGTDLDHGVLLVGYGTDKETKKDFWIMKNSWGSGWGRDGYMYM 402


>gi|7381610|gb|AAF61565.1|AF227957_1 cathepsin L-like proteinase precursor [Rhipicephalus microplus]
          Length = 332

 Score =  233 bits (593), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 126/322 (39%), Positives = 182/322 (56%), Gaps = 37/322 (11%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEF 83
           E +     ++Y++  E+ +RFKIF +N   I K N +   G  +YKL +N+F DL   EF
Sbjct: 28  EAFKTTHKKSYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEF 87

Query: 84  IASHTGYK----------MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPV 133
                G+           +P  N+++ S                LP+ +DWR +GAVTPV
Sbjct: 88  ARIFNGHHGTRKTGGSTFLPPANVNDSS----------------LPKVVDWRKKGAVTPV 131

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSY 190
           K+QG CG CW FSA  ++EG   ++ G L+SLSEQ ++DCS   G+ GC GG M+DAF Y
Sbjct: 132 KDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKY 191

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQ-PVSVA 249
           I  + G+  E+ YPY+  +G C +++  + A      +    SE+ L+ AV+   P+SVA
Sbjct: 192 IKANDGIDTEKSYPYEAVDGECRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVA 251

Query: 250 IDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFI 307
           IDAS   F+ YS GV+  P     +L+H V +VGYG      YWL+KNSW ++WG+ G+I
Sbjct: 252 IDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYI 311

Query: 308 RMRRDVGGAGLCGIARKASYPI 329
            M RD      CGIA +ASYP+
Sbjct: 312 LMSRD--NNNQCGIASQASYPL 331


>gi|296082368|emb|CBI21373.3| unnamed protein product [Vitis vinifera]
          Length = 245

 Score =  233 bits (593), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 114/217 (52%), Positives = 144/217 (66%), Gaps = 5/217 (2%)

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-- 175
           LP S+DWR  GAV PVK+Q SCG CW FS VAAVEGI +I TG LISLSEQ+++DC    
Sbjct: 6   LPESVDWRETGAVNPVKDQRSCGSCWAFSTVAAVEGINQIVTGELISLSEQELVDCDTEY 65

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SE 234
             GC GG MD AF +II++ GL  E+ YPY   +G CN    + K   I  Y+DVP   E
Sbjct: 66  DMGCNGGLMDYAFDFIIKNGGLDTEKDYPYTGFDGECNLSGKSSKVVSIDGYEDVPPFDE 125

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIK 294
            AL+ AV+ QPVSVA++A     + Y  G+F G CG  L+H +  VGYG+ N   YW+++
Sbjct: 126 KALQKAVAHQPVSVAVEAGGRALQLYVSGIFTGECGTALDHGIVAVGYGTENGTDYWIVR 185

Query: 295 NSWGQNWGEGGFIRMRRDVGGA--GLCGIARKASYPI 329
           NSWG +WGE G+IRM R++  A  G CGIA +ASYPI
Sbjct: 186 NSWGSSWGENGYIRMERNMADAFSGKCGIAMEASYPI 222


>gi|74151179|dbj|BAE27712.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  233 bits (593), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/325 (40%), Positives = 183/325 (56%), Gaps = 26/325 (8%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEF 75
           + + SA+   W +   R Y    E+  R  I++KN R I+  N E   G   + + +N F
Sbjct: 22  DQTFSAEWHQWKSTHRRLYGTNEEEWRR-AIWEKNMRMIQLHNGEYSNGQHGFSMEMNAF 80

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
            D+T+EEF     GY+          +      F  P   + +P+S+DWR +G VTPVKN
Sbjct: 81  GDMTNEEFRQVVNGYR--------HQKHKKGRLFQEPLMLK-IPKSVDWREKGCVTPVKN 131

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYII 192
           QG CG CW FSA   +EG   ++TG+LISLSEQ ++DCS   G++GC GG MD AF YI 
Sbjct: 132 QGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIK 191

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSR-QPVSVAID 251
            + GL  E  YPY+ ++G C + R     A    + D+P  E AL  AV+   P+SVA+D
Sbjct: 192 ENGGLDSEESYPYEAKDGSCKY-RAEFAVANDTGFVDIPQQEEALMKAVATVGPISVAMD 250

Query: 252 ASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYG----SSNEGPYWLIKNSWGQNWGEGG 305
           AS P  ++YS G++  P     NL+H V +VGYG     SN+  YWL+KNSWG  WG  G
Sbjct: 251 ASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEG 310

Query: 306 FIRMRRDVGGAGLCGIARKASYPIA 330
           +I++ +D      CG+A  ASYP+ 
Sbjct: 311 YIKIAKDRDNH--CGLATAASYPVV 333


>gi|6753558|ref|NP_034114.1| cathepsin L1 preproprotein [Mus musculus]
 gi|115742|sp|P06797.2|CATL1_MOUSE RecName: Full=Cathepsin L1; AltName: Full=Major excreted protein;
           Short=MEP; AltName: Full=p39 cysteine proteinase;
           Contains: RecName: Full=Cathepsin L1 heavy chain;
           Contains: RecName: Full=Cathepsin L1 light chain; Flags:
           Precursor
 gi|53047|emb|CAA29470.1| unnamed protein product [Mus musculus]
 gi|309186|gb|AAA37445.1| preprocysteine proteinase [Mus musculus]
 gi|12832050|dbj|BAB21945.1| unnamed protein product [Mus musculus]
 gi|26340196|dbj|BAC33761.1| unnamed protein product [Mus musculus]
 gi|45768760|gb|AAH68163.1| Cathepsin L [Mus musculus]
 gi|74139700|dbj|BAE31701.1| unnamed protein product [Mus musculus]
 gi|74146632|dbj|BAE41323.1| unnamed protein product [Mus musculus]
 gi|74151584|dbj|BAE41141.1| unnamed protein product [Mus musculus]
 gi|74185397|dbj|BAE30172.1| unnamed protein product [Mus musculus]
 gi|74197196|dbj|BAE35143.1| unnamed protein product [Mus musculus]
 gi|74203006|dbj|BAE26206.1| unnamed protein product [Mus musculus]
 gi|74219606|dbj|BAE29572.1| unnamed protein product [Mus musculus]
 gi|148684295|gb|EDL16242.1| cathepsin L [Mus musculus]
          Length = 334

 Score =  232 bits (592), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/325 (40%), Positives = 183/325 (56%), Gaps = 26/325 (8%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEF 75
           + + SA+   W +   R Y    E+  R  I++KN R I+  N E   G   + + +N F
Sbjct: 22  DQTFSAEWHQWKSTHRRLYGTNEEEWRR-AIWEKNMRMIQLHNGEYSNGQHGFSMEMNAF 80

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
            D+T+EEF     GY+          +      F  P   + +P+S+DWR +G VTPVKN
Sbjct: 81  GDMTNEEFRQVVNGYR--------HQKHKKGRLFQEPLMLK-IPKSVDWREKGCVTPVKN 131

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYII 192
           QG CG CW FSA   +EG   ++TG+LISLSEQ ++DCS   G++GC GG MD AF YI 
Sbjct: 132 QGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIK 191

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSR-QPVSVAID 251
            + GL  E  YPY+ ++G C + R     A    + D+P  E AL  AV+   P+SVA+D
Sbjct: 192 ENGGLDSEESYPYEAKDGSCKY-RAEFAVANDTGFVDIPQQEKALMKAVATVGPISVAMD 250

Query: 252 ASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYG----SSNEGPYWLIKNSWGQNWGEGG 305
           AS P  ++YS G++  P     NL+H V +VGYG     SN+  YWL+KNSWG  WG  G
Sbjct: 251 ASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEG 310

Query: 306 FIRMRRDVGGAGLCGIARKASYPIA 330
           +I++ +D      CG+A  ASYP+ 
Sbjct: 311 YIKIAKDRDNH--CGLATAASYPVV 333


>gi|161172356|pdb|3BCN|A Chain A, Crystal Structure Of A Papain-Like Cysteine Protease
           Ervatamin-A Complexed With Irreversible Inhibitor E-64
 gi|161172357|pdb|3BCN|B Chain B, Crystal Structure Of A Papain-Like Cysteine Protease
           Ervatamin-A Complexed With Irreversible Inhibitor E-64
          Length = 209

 Score =  232 bits (592), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 119/213 (55%), Positives = 146/213 (68%), Gaps = 10/213 (4%)

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-GS 176
           LP  +DWRA+GAV P+KNQG CG CW FS V  VE I +IRTG LISLSEQQ++DCS  +
Sbjct: 1   LPEHVDWRAKGAVIPLKNQGKCGSCWAFSTVTTVESINQIRTGNLISLSEQQLVDCSKKN 60

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSEL 235
            GC GG+ D A+ YII + G+  E  YPY+  +G C   R A K  RI   + VP  +E 
Sbjct: 61  HGCKGGYFDRAYQYIIANGGIDTEANYPYKAFQGPC---RAAKKVVRIDGCKGVPQCNEN 117

Query: 236 ALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKN 295
           AL+ AV+ QP  VAIDASS  F++Y GG+F GPCG  LNH V IVGYG      YW+++N
Sbjct: 118 ALKNAVASQPSVVAIDASSKQFQHYKGGIFTGPCGTKLNHGVVIVGYGKD----YWIVRN 173

Query: 296 SWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           SWG++WGE G+ RM+R VGG GLCGIAR   YP
Sbjct: 174 SWGRHWGEQGYTRMKR-VGGCGLCGIARLPFYP 205


>gi|195429415|ref|XP_002062758.1| GK19626 [Drosophila willistoni]
 gi|194158843|gb|EDW73744.1| GK19626 [Drosophila willistoni]
          Length = 341

 Score =  232 bits (592), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 125/308 (40%), Positives = 185/308 (60%), Gaps = 16/308 (5%)

Query: 35  RTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIASHTGYK 91
           + Y +  E+  R KIF +N   I K N+    G  +YKL+LN++AD+   EF  +  G+ 
Sbjct: 38  KNYADSTEETFRMKIFNENKHHIAKHNQRYATGEVSYKLALNKYADMLHHEFRETMNGFN 97

Query: 92  MPT-RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAA 150
               + + +  +S+    F  P+  + LP ++DWR +GAVT VK+QG CG CW FS+  A
Sbjct: 98  YTLHKQLRSTDESFTGVTFISPEHVK-LPTAVDWRTKGAVTEVKDQGHCGSCWAFSSTGA 156

Query: 151 VEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQR 207
           +EG    ++G L+SLSEQ ++DCS   G+ GC GG MD+AF Y+  + G+  E+ Y Y+ 
Sbjct: 157 IEGQHFRKSGTLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYVKDNGGIDTEKSYAYEG 216

Query: 208 REGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR-QPVSVAIDASSPGFRYYSGGVF 265
            +  C++ + ++ A   R + D+P  +E  L  AV+   PVSVAIDAS   F++YS GV+
Sbjct: 217 IDDSCHFDKNSIGATD-RGFADIPQGNEKKLAQAVATIGPVSVAIDASQQSFQFYSEGVY 275

Query: 266 AGP--CGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIA 322
             P     NL+H V +VGYG+  +G  YWL+KNSWG  WG+ GFI+M R+      CGIA
Sbjct: 276 DEPNCSAENLDHGVLVVGYGTEKDGSDYWLVKNSWGTTWGDKGFIKMSRN--KENQCGIA 333

Query: 323 RKASYPIA 330
             +SYP+ 
Sbjct: 334 SASSYPLV 341


>gi|317135059|gb|ADV03094.1| cathepsin L [Hyriopsis cumingii]
 gi|372126672|gb|AEX88474.1| cathepsin L [Hyriopsis schlegelii]
          Length = 333

 Score =  232 bits (592), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 132/306 (43%), Positives = 186/306 (60%), Gaps = 21/306 (6%)

Query: 35  RTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQ---TYKLSLNEFADLTDEEFIASHTGYK 91
           +TY+   E+ +R+ ++K NF  I + N + +Q   TY L++NE+ DLT+EE+    TG K
Sbjct: 39  KTYRAH-EEPVRYSVWKDNFLAINRHNSKADQGFHTYWLAMNEYGDLTNEEYFRLRTGLK 97

Query: 92  MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAV 151
           +   NI  +        F Y +     P  +DWR++G VTPVKNQG CG C+ FSA  AV
Sbjct: 98  I-NANIERRGLV-----FKYTNLSE-YPSEVDWRSKGYVTPVKNQGGCGSCYAFSATGAV 150

Query: 152 EGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRR 208
           EG    +TG+L+SLSEQ ++DCS   G++GC GG MD +F+YI  + G+  E  YPY+ R
Sbjct: 151 EGQHFRKTGKLVSLSEQNIVDCSFKEGNKGCRGGLMDKSFTYIKDNNGIDTEEAYPYEAR 210

Query: 209 EGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSR-QPVSVAIDASSPGFRYYSGGVFA 266
           +G C ++R  +  A +R Y D+P   E+AL++AV+   P+SVAID     FR+Y  GVF 
Sbjct: 211 DGPCRFRRSEV-GATVRGYVDLPENDEIALQHAVTTIGPISVAIDGHHFNFRFYHHGVFD 269

Query: 267 GP-CG-NNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARK 324
            P C    +NH V +VGYG+ +   YWL+KNSWG+ WG  G+I M R+      C I   
Sbjct: 270 NPNCSKTKINHGVLVVGYGTRDGLDYWLVKNSWGERWGAEGYILMSRN--NDNQCCITCA 327

Query: 325 ASYPIA 330
           ASYPI 
Sbjct: 328 ASYPIV 333


>gi|4886998|gb|AAD32136.1|AF121837_1 cathepsin L [Mus musculus]
 gi|4887000|gb|AAD32137.1|AF121838_1 cathepsin L [Mus musculus]
 gi|4887002|gb|AAD32138.1|AF121839_1 cathepsin L [Mus musculus]
 gi|200501|gb|AAA39984.1| preprocathepsin L precursor [Mus musculus]
          Length = 334

 Score =  232 bits (592), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/325 (40%), Positives = 183/325 (56%), Gaps = 26/325 (8%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEF 75
           + + SA+   W +   R Y    E+  R  I++KN R I+  N E   G   + + +N F
Sbjct: 22  DQTFSAEWHQWKSTHRRLYGTNEEEWRR-AIWEKNMRIIQLHNGEYSNGQHGFSMEMNAF 80

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
            D+T+EEF     GY+          +      F  P   + +P+S+DWR +G VTPVKN
Sbjct: 81  GDMTNEEFRQVVNGYR--------HQKHKKGRLFQEPLMLK-IPKSVDWREKGCVTPVKN 131

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYII 192
           QG CG CW FSA   +EG   ++TG+LISLSEQ ++DCS   G++GC GG MD AF YI 
Sbjct: 132 QGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIK 191

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSR-QPVSVAID 251
            + GL  E  YPY+ ++G C + R     A    + D+P  E AL  AV+   P+SVA+D
Sbjct: 192 ENGGLDSEESYPYEAKDGSCKY-RAEFAVANDTGFVDIPQQEKALMKAVATVGPISVAMD 250

Query: 252 ASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYG----SSNEGPYWLIKNSWGQNWGEGG 305
           AS P  ++YS G++  P     NL+H V +VGYG     SN+  YWL+KNSWG  WG  G
Sbjct: 251 ASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEG 310

Query: 306 FIRMRRDVGGAGLCGIARKASYPIA 330
           +I++ +D      CG+A  ASYP+ 
Sbjct: 311 YIKIAKDRDNH--CGLATAASYPVV 333


>gi|12847813|dbj|BAB27719.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  232 bits (592), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/325 (40%), Positives = 183/325 (56%), Gaps = 26/325 (8%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEF 75
           + + SA+   W +   R Y    E+  R  I++KN R I+  N E   G   + + +N F
Sbjct: 22  DQTFSAEWHQWKSTHRRLYGTNEEEWRR-AIWEKNMRMIQLHNGEYSNGQHGFSMEMNAF 80

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
            D+T+EEF     GY+          +      F  P   + +P+S+DWR +G VTPVKN
Sbjct: 81  GDMTNEEFRQVVNGYR--------HQKHKKGRLFQEPLMLK-IPKSVDWREKGCVTPVKN 131

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYII 192
           QG CG CW FSA   +EG   ++TG+LISLSEQ ++DCS   G++GC GG MD AF YI 
Sbjct: 132 QGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDYAFQYIK 191

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSR-QPVSVAID 251
            + GL  E  YPY+ ++G C + R     A    + D+P  E AL  AV+   P+SVA+D
Sbjct: 192 ENGGLDSEESYPYEAKDGSCKY-RAEFAVANDTGFVDIPQQEKALMKAVATVGPISVAMD 250

Query: 252 ASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYG----SSNEGPYWLIKNSWGQNWGEGG 305
           AS P  ++YS G++  P     NL+H V +VGYG     SN+  YWL+KNSWG  WG  G
Sbjct: 251 ASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEG 310

Query: 306 FIRMRRDVGGAGLCGIARKASYPIA 330
           +I++ +D      CG+A  ASYP+ 
Sbjct: 311 YIKIAKDRDNH--CGLATAASYPVV 333


>gi|22653679|sp|Q26636.1|CATL_SARPE RecName: Full=Cathepsin L; Contains: RecName: Full=Cathepsin L
           heavy chain; Contains: RecName: Full=Cathepsin L light
           chain; Flags: Precursor
 gi|505140|dbj|BAA03970.1| cathepsin L precursor [Sarcophaga peregrina]
          Length = 339

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 130/320 (40%), Positives = 183/320 (57%), Gaps = 15/320 (4%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNR---EGNQTYKLSLNEFA 76
           D I  +   +  Q  + Y N+ E+  R KIF +N   I K N+   +G  +YKL LN++A
Sbjct: 22  DLIKEEWHTYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYA 81

Query: 77  DLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQ 136
           D+   EF  +  GY    R +  +        +  P +   +P+S+DWR  GAVT VK+Q
Sbjct: 82  DMLHHEFKETMNGYNHTLRQLMRERTGLVGATY-IPPAHVTVPKSVDWREHGAVTGVKDQ 140

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIR 193
           G CG CW FS+  A+EG    + G L+SLSEQ ++DCS   G+ GC GG MD+AF YI  
Sbjct: 141 GHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKD 200

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVAID 251
           + G+  E+ YPY+  +  C++ +  + A     + D+P   E  ++ AV+   PVSVAID
Sbjct: 201 NGGIDTEKSYPYEGIDDSCHFNKATIGATDT-GFVDIPEGDEEKMKKAVATMGPVSVAID 259

Query: 252 ASSPGFRYYSGGVFAGP-CG-NNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIR 308
           AS   F+ YS GV+  P C   NL+H V +VGYG+   G  YWL+KNSWG  WGE G+I+
Sbjct: 260 ASHESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESGMDYWLVKNSWGTTWGEQGYIK 319

Query: 309 MRRDVGGAGLCGIARKASYP 328
           M R+      CGIA  +SYP
Sbjct: 320 MARNQNNQ--CGIATASSYP 337


>gi|402770503|gb|AFQ98386.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 127/323 (39%), Positives = 181/323 (56%), Gaps = 37/323 (11%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEF 83
           E +     +TY++  E+ +RFKIF +N   I K N +   G  +YKL +N+F DL   EF
Sbjct: 28  EAFKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEF 87

Query: 84  IASHTGYK----------MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPV 133
                G+           +P  N+++ S                LP+ +DWR +GAVTPV
Sbjct: 88  ARIFNGHHGTRKTGGSTFLPPANVNDSS----------------LPKVVDWRKKGAVTPV 131

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSY 190
           K+QG CG CW FSA  ++EG   ++ G L+SLSEQ ++DCS   G+ GC GG M+DAF Y
Sbjct: 132 KDQGQCGSCWAFSATGSLEGRHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKY 191

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQ-PVSVA 249
           I  + G+  E+ YPY+  +G C +++  + A      +    SE  L+ AV+   P+SVA
Sbjct: 192 IKENDGIDTEKSYPYEAVDGECRFKKEDVGATDTGYVEIKAGSEDDLKKAVATVGPISVA 251

Query: 250 IDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFI 307
           IDAS   F+ YS GV+  P     +L+H V +VGYG      YWL+KNSW ++WG+ G+I
Sbjct: 252 IDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYI 311

Query: 308 RMRRDVGGAGLCGIARKASYPIA 330
            M RD      CGIA +ASYP+ 
Sbjct: 312 LMSRD--NNNQCGIASQASYPLV 332


>gi|154183745|gb|ABS70713.1| cathepsin L-like cysteine proteinase [Dermacentor variabilis]
          Length = 333

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/350 (38%), Positives = 194/350 (55%), Gaps = 39/350 (11%)

Query: 1   MLIIMVTWASLVMSRTLHEDSI-SAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           ML I +  A +V++       I   + E + A   ++Y++  E+ +RFKIF +N   + +
Sbjct: 1   MLRISLLCAFVVVTTAASSHEILRTQWEAFKATHKKSYQSNMEELLRFKIFSENSLLVAR 60

Query: 60  FNRE---GNQTYKLSLNEFADLTDEEFIASHTGYK-----------MPTRNISNQSQSYA 105
            N +   G  +YKL +N+F DL   EF     GY+           +P  N++  S    
Sbjct: 61  HNEKYARGLVSYKLGMNQFGDLLPHEFARMFNGYRGARTAGRGSTFLPPANVNYSS---- 116

Query: 106 NNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISL 165
                       LP+S+DWR +GAVTPVKNQG CG CW FS   ++EG   ++TG L+SL
Sbjct: 117 ------------LPQSMDWREKGAVTPVKNQGQCGSCWAFSTTGSLEGQHFLKTGVLVSL 164

Query: 166 SEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAA 222
           SEQ ++DCS   G+ GC GG MD+AF YI  + G+  E+ YPY+  +G C +++  + A 
Sbjct: 165 SEQNLVDCSETFGNHGCEGGLMDNAFQYIKANGGIDTEKSYPYEAEDGECRFKKQNVGAT 224

Query: 223 RIRSYQDVPTSELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVF-AGPCGNN-LNHAVTI 279
                     SE  L+ AV+   PVSVAIDAS   F+ YS GV+    C +  L+H V +
Sbjct: 225 DTGFVDIEQGSEDDLKKAVATVGPVSVAIDASHSSFQLYSEGVYDETECSSEQLDHGVLV 284

Query: 280 VGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           VGYG  +   YWL+KNSW ++WG+ G+I+M RD      CGIA  ASYP+
Sbjct: 285 VGYGVEDGKKYWLVKNSWAESWGDNGYIKMSRDKDNQ--CGIASAASYPL 332


>gi|156397875|ref|XP_001637915.1| predicted protein [Nematostella vectensis]
 gi|156225031|gb|EDO45852.1| predicted protein [Nematostella vectensis]
          Length = 331

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 126/309 (40%), Positives = 184/309 (59%), Gaps = 16/309 (5%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           W +   + Y N+ E+ MR  I++ N + I   N EG  ++KL++N   D+T  E   +  
Sbjct: 32  WKSFHGKEYPNKNEETMRNFIWQNNLKKIVTHN-EGKHSFKLAMNHLGDMTSLEISQTLL 90

Query: 89  GYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAV 148
           G K+        ++S        P +   +  SIDWR++G VTPVKNQG CG CW FS  
Sbjct: 91  GLKL-----KKHAESQPKGATFLPPANVKVVDSIDWRSKGYVTPVKNQGQCGSCWAFSTT 145

Query: 149 AAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPY 205
            A+EG    +TG+L+SLSEQ ++DCS   G+ GC GG MD+AF YI  + G+  E+ YPY
Sbjct: 146 GALEGQHFRKTGKLVSLSEQNLVDCSGKYGNNGCEGGLMDNAFQYIKENGGIDTEKSYPY 205

Query: 206 QRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAV-SRQPVSVAIDASSPGFRYYSGG 263
             ++G C++ + A+  A+   + D+PT  E AL+ A+ S  P+S+AIDAS   F +Y  G
Sbjct: 206 LAKDGVCHYNKSAI-GAKDTGFVDIPTGDENALQQALASVGPISIAIDASQSTFHFYHQG 264

Query: 264 VFAGP-CGNN-LNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGI 321
           V+  P C +  L+H V  VGYG+ +   YWL+KNSWG +WGE G+I++ R+      CG+
Sbjct: 265 VYDDPDCSSTRLDHGVLAVGYGTDDGKDYWLVKNSWGPSWGEEGYIKIARN--DHDKCGV 322

Query: 322 ARKASYPIA 330
           A KASYP+ 
Sbjct: 323 ASKASYPLV 331


>gi|74149661|dbj|BAE36450.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/325 (40%), Positives = 183/325 (56%), Gaps = 26/325 (8%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEF 75
           + + SA+   W +   R Y    E+  R  I++KN R I+  N E   G   + + +N F
Sbjct: 22  DQTFSAEWHQWKSTHRRLYGTNEEEWRR-AIWEKNMRMIQLHNGEYSNGQHGFSMEMNAF 80

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
            D+T+EEF     GY+          +      F  P   + +P+S+DWR +G VTPVKN
Sbjct: 81  GDMTNEEFRQVVNGYR--------HQKHKKGRLFQEPLMLK-IPKSVDWREKGCVTPVKN 131

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYII 192
           QG CG CW FSA   +EG   ++TG+LISLSEQ ++DCS   G++GC GG MD AF YI 
Sbjct: 132 QGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIK 191

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSR-QPVSVAID 251
            + GL  E  YPY+ ++G C + R     A    + D+P  E AL  AV+   P+SVA+D
Sbjct: 192 ENGGLDSEESYPYEAKDGSCKY-RAEFAVANGTGFVDIPQQEKALMKAVATVGPISVAMD 250

Query: 252 ASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYG----SSNEGPYWLIKNSWGQNWGEGG 305
           AS P  ++YS G++  P     NL+H V +VGYG     SN+  YWL+KNSWG  WG  G
Sbjct: 251 ASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEG 310

Query: 306 FIRMRRDVGGAGLCGIARKASYPIA 330
           +I++ +D      CG+A  ASYP+ 
Sbjct: 311 YIKIAKDRDNH--CGLATAASYPVV 333


>gi|74213650|dbj|BAE35627.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/325 (40%), Positives = 182/325 (56%), Gaps = 26/325 (8%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEF 75
           + + SA+   W +   R Y    E+  R  I++KN R I+  N E   G   + + +N F
Sbjct: 22  DQTFSAEWHQWKSTHRRLYGTNEEEWRR-AIWEKNMRMIQLHNGEYSNGQHGFSMEMNAF 80

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
            D+T+EEF     GY+          +      F  P   + +P+S+DWR +G VTPVKN
Sbjct: 81  GDMTNEEFRQVVNGYR--------HQKHKKGRLFQEPLMLK-IPKSVDWREKGCVTPVKN 131

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYII 192
           QG CG CW FSA   +EG   ++TG+LISLSEQ ++DCS   G++GC GG MD AF YI 
Sbjct: 132 QGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIK 191

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSR-QPVSVAID 251
            + GL  E  YPY+ ++G C + R     A    + D+P  E AL  AV+   P+SVA+D
Sbjct: 192 ENGGLDSEESYPYEAKDGSCKY-RAEFAVANDTGFVDIPQQEKALMKAVATVGPISVAMD 250

Query: 252 ASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYG----SSNEGPYWLIKNSWGQNWGEGG 305
           AS P  ++YS G++  P     NL+H V +VGYG     SN+  YWL+KNSWG  WG  G
Sbjct: 251 ASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEG 310

Query: 306 FIRMRRDVGGAGLCGIARKASYPIA 330
           +I + +D      CG+A  ASYP+ 
Sbjct: 311 YIEIAKDRDNH--CGLATAASYPVV 333


>gi|24653516|ref|NP_725347.1| cysteine proteinase-1, isoform A [Drosophila melanogaster]
 gi|24653518|ref|NP_725348.1| cysteine proteinase-1, isoform B [Drosophila melanogaster]
 gi|1658527|gb|AAB18345.1| cysteine proteinase 1 [Drosophila melanogaster]
 gi|2305221|gb|AAB65749.1| cysteine proteinase-1 [Drosophila melanogaster]
 gi|7303249|gb|AAF58311.1| cysteine proteinase-1, isoform A [Drosophila melanogaster]
 gi|21627210|gb|AAM68566.1| cysteine proteinase-1, isoform B [Drosophila melanogaster]
 gi|54650754|gb|AAV36956.1| LP06554p [Drosophila melanogaster]
 gi|220951982|gb|ACL88534.1| Cp1-PA [synthetic construct]
          Length = 341

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/308 (41%), Positives = 186/308 (60%), Gaps = 16/308 (5%)

Query: 35  RTYKNQAEKAMRFKIFKKNFRFIEKFNR---EGNQTYKLSLNEFADLTDEEFIASHTGYK 91
           + Y+++ E+  R KIF +N   I K N+   EG  ++KL++N++ADL   EF     G+ 
Sbjct: 38  KNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFN 97

Query: 92  MPT-RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAA 150
               + +    +S+    F  P +   LP+S+DWR +GAVT VK+QG CG CW FS+  A
Sbjct: 98  YTLHKQLRAADESFKGVTFISP-AHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGA 156

Query: 151 VEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQR 207
           +EG    ++G L+SLSEQ ++DCS   G+ GC GG MD+AF YI  + G+  E+ YPY+ 
Sbjct: 157 LEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEA 216

Query: 208 REGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVF 265
            +  C++ +G + A   R + D+P   E  +  AV+   PVSVAIDAS   F++YS GV+
Sbjct: 217 IDDSCHFNKGTVGATD-RGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVY 275

Query: 266 AGP-C-GNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIA 322
             P C   NL+H V +VG+G+   G  YWL+KNSWG  WG+ GFI+M R+      CGIA
Sbjct: 276 NEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRN--KENQCGIA 333

Query: 323 RKASYPIA 330
             +SYP+ 
Sbjct: 334 SASSYPLV 341


>gi|242093994|ref|XP_002437487.1| hypothetical protein SORBIDRAFT_10g027980 [Sorghum bicolor]
 gi|241915710|gb|EER88854.1| hypothetical protein SORBIDRAFT_10g027980 [Sorghum bicolor]
          Length = 341

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/318 (41%), Positives = 181/318 (56%), Gaps = 31/318 (9%)

Query: 19  EDSISAKHELWMAQSARTYKN-QAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNE 74
           ++ +   ++ W ++  R          +R K+F+ N R+I+  N E   G  T++L L  
Sbjct: 44  DEEVRQLYKTWKSEHGRPRDGISVADGLRLKVFRDNLRYIDAHNAEADAGLHTFRLGLTP 103

Query: 75  FADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVK 134
           F DLT EEF A   G+      +++     A++ +  P +   LP ++DWR +GAVT VK
Sbjct: 104 FTDLTLEEFRAHALGF------LNSTLPRVASDRY-LPRAGDDLPDAVDWRQQGAVTGVK 156

Query: 135 NQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-GCYGGWMDDAFSYIIR 193
           NQ  CG CW FSAVAA+EGI KI T  LISLSEQ+++DC     GC GG M  AF ++I 
Sbjct: 157 NQLDCGGCWAFSAVAAMEGINKIVTNNLISLSEQELIDCDTEDYGCQGGEMQKAFQFVID 216

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELALRYAVSRQPVSVAIDA 252
           + G+  E  YP+    G C+  R   K   I SY++VPT+ E AL+ AV+ QP       
Sbjct: 217 NGGIDTEADYPFIGTNGTCDAIREKRKVVSIDSYENVPTNDEEALQKAVANQP------- 269

Query: 253 SSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRD 312
                     G+F GPCG  L+H VT VGYGS N   +W++KNSWG  WGE G+IRM+R+
Sbjct: 270 ----------GIFNGPCGFILDHGVTAVGYGSDNGEDFWIVKNSWGAEWGESGYIRMKRN 319

Query: 313 V-GGAGLCGIARKASYPI 329
           V    G CGIA  ASYP+
Sbjct: 320 VLLPMGKCGIAMYASYPV 337


>gi|24653514|ref|NP_523735.2| cysteine proteinase-1, isoform C [Drosophila melanogaster]
 gi|118572624|sp|Q95029.2|CATL_DROME RecName: Full=Cathepsin L; AltName: Full=Cysteine proteinase 1;
           Contains: RecName: Full=Cathepsin L heavy chain;
           Contains: RecName: Full=Cathepsin L light chain; Flags:
           Precursor
 gi|21627209|gb|AAM68565.1| cysteine proteinase-1, isoform C [Drosophila melanogaster]
          Length = 371

 Score =  231 bits (590), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 129/323 (39%), Positives = 191/323 (59%), Gaps = 16/323 (4%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNR---EGNQTYKLSLNEFA 76
           D +  +   +  +  + Y+++ E+  R KIF +N   I K N+   EG  ++KL++N++A
Sbjct: 53  DVVMEEWHTFKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYA 112

Query: 77  DLTDEEFIASHTGYKMPT-RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
           DL   EF     G+     + +    +S+    F  P +   LP+S+DWR +GAVT VK+
Sbjct: 113 DLLHHEFRQLMNGFNYTLHKQLRAADESFKGVTFISP-AHVTLPKSVDWRTKGAVTAVKD 171

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYII 192
           QG CG CW FS+  A+EG    ++G L+SLSEQ ++DCS   G+ GC GG MD+AF YI 
Sbjct: 172 QGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIK 231

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVAI 250
            + G+  E+ YPY+  +  C++ +G + A   R + D+P   E  +  AV+   PVSVAI
Sbjct: 232 DNGGIDTEKSYPYEAIDDSCHFNKGTVGATD-RGFTDIPQGDEKKMAEAVATVGPVSVAI 290

Query: 251 DASSPGFRYYSGGVFAGP-C-GNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFI 307
           DAS   F++YS GV+  P C   NL+H V +VG+G+   G  YWL+KNSWG  WG+ GFI
Sbjct: 291 DASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFI 350

Query: 308 RMRRDVGGAGLCGIARKASYPIA 330
           +M R+      CGIA  +SYP+ 
Sbjct: 351 KMLRN--KENQCGIASASSYPLV 371


>gi|261289783|ref|XP_002611753.1| hypothetical protein BRAFLDRAFT_236364 [Branchiostoma floridae]
 gi|229297125|gb|EEN67763.1| hypothetical protein BRAFLDRAFT_236364 [Branchiostoma floridae]
          Length = 307

 Score =  231 bits (590), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/299 (43%), Positives = 178/299 (59%), Gaps = 16/299 (5%)

Query: 42  EKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNIS 98
           E++ R +IF+ N + I   N E   G  TY L  N+FA +T++EF+A+  G  +  RN S
Sbjct: 15  EESRRMEIFENNTKLINLHNNEADLGMHTYWLGHNQFAHMTNDEFVANVIGGCLLDRNAS 74

Query: 99  NQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIR 158
              +S A+    Y  +   LP ++DWR +G VTPVKNQ  CG CW FS   ++EG T  +
Sbjct: 75  ---KSTADRVHQYDSNLVELPDTVDWRTKGYVTPVKNQEQCGSCWAFSTTGSLEGQTFKK 131

Query: 159 TGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQ 215
           TG+L+SLSEQ ++DCS   G++GC GG MDDAF YI  + G+  E  YPY+ R+G C + 
Sbjct: 132 TGKLVSLSEQNLVDCSGEFGNQGCNGGLMDDAFKYIKANGGIDTEDSYPYEARDGKCRF- 190

Query: 216 RGAMKAARIRSYQDVPT-SELALRYAVSR-QPVSVAIDASSPGFRYYSGGVFAGP--CGN 271
           + A   A +  Y D+    E AL  AV+   P+SVAIDAS   F+ YS GV+  P     
Sbjct: 191 KPADVGATVTGYTDISEGDEGALTQAVATVGPISVAIDASHHTFQMYSHGVYYEPQCSST 250

Query: 272 NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
            L+H V  VGYG+     YWL+KNSWG+ WG+ G+I M R+      CGIA  ASYP+ 
Sbjct: 251 ELDHGVLAVGYGTEGGKDYWLVKNSWGEVWGQNGYIMMSRNKNNQ--CGIATSASYPLV 307


>gi|330805277|ref|XP_003290611.1| hypothetical protein DICPUDRAFT_81345 [Dictyostelium purpureum]
 gi|325079250|gb|EGC32859.1| hypothetical protein DICPUDRAFT_81345 [Dictyostelium purpureum]
          Length = 330

 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 125/308 (40%), Positives = 184/308 (59%), Gaps = 20/308 (6%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           WM +  R+Y +  E   +++ FK N  FI  +N   N    L L +FADLT+EE+   + 
Sbjct: 36  WMKKHDRSYHHH-EFNNKYQAFKDNMDFIHNWNTNKNSKTVLGLTQFADLTNEEYRKIYL 94

Query: 89  GYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAV 148
           G K+   N++ +  ++    F  PDS       IDWR +GAV+ VK+QG CG CW FS  
Sbjct: 95  GTKV---NVAPEKHNFNMIHFTGPDS-------IDWRTKGAVSHVKDQGQCGSCWSFSTT 144

Query: 149 AAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPY 205
            +VEG  +I+TG +++LSEQ ++DCS   G+ GC GG M +AF +I+   G+  E  YPY
Sbjct: 145 GSVEGAHQIKTGNMVTLSEQNLVDCSGKFGNNGCDGGLMVNAFKFIMSQGGVATEDSYPY 204

Query: 206 QRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSGGV 264
              +G C + + +M  A I  Y+++   SEL L+ A+++QPVS+AIDAS   F+ Y  GV
Sbjct: 205 NAVQGKCKFTK-SMVGANISGYKEITQGSELELQAALTKQPVSIAIDASQQSFQLYKSGV 263

Query: 265 FAGP-CGN-NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIA 322
           +  P C +  L+H V  VGYG+ N   Y+++KNSW  +WG+ G+I M R+      CG+A
Sbjct: 264 YDEPECSSYQLDHGVLAVGYGTENGKDYYIVKNSWADSWGQDGYIFMSRNA--KNQCGVA 321

Query: 323 RKASYPIA 330
             ASYPI+
Sbjct: 322 TMASYPIS 329


>gi|195153545|ref|XP_002017686.1| GL17172 [Drosophila persimilis]
 gi|194113482|gb|EDW35525.1| GL17172 [Drosophila persimilis]
          Length = 341

 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 123/308 (39%), Positives = 188/308 (61%), Gaps = 16/308 (5%)

Query: 35  RTYKNQAEKAMRFKIFKKNFRFIEKFNR---EGNQTYKLSLNEFADLTDEEFIASHTGYK 91
           + Y+++ E+  R KIF +N   I K N+    G  ++K+++N++AD+   EF ++  G+ 
Sbjct: 38  KNYQDETEERFRLKIFNENKHKIAKHNQLWATGAVSFKMAVNKYADMLHHEFYSTMNGFN 97

Query: 92  MPT-RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAA 150
               + + N  +S+    F  P+    LP+ +DWR +GAVT VK+QG CG CW FS+  A
Sbjct: 98  YTLHKQLRNADESFKGVTFISPE-HVTLPKQVDWRTKGAVTDVKDQGHCGSCWAFSSTGA 156

Query: 151 VEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQR 207
           +EG    ++G L+SLSEQ ++DCS   G+ GC GG MD+AF YI  + G+  E+ YPY+ 
Sbjct: 157 LEGQHYRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEA 216

Query: 208 REGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR-QPVSVAIDASSPGFRYYSGGVF 265
            +  C++ +G++ A   R + D+P  +E  +  AV+   PV+VAIDAS   F++YS GV+
Sbjct: 217 IDDSCHFNKGSIGATD-RGFVDIPQGNEKKMAEAVATIGPVAVAIDASHESFQFYSEGVY 275

Query: 266 AGPC--GNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIA 322
             P     NL+H V +VG+G+   G  YWL+KNSWG  WG+ GFI+M R+      CGIA
Sbjct: 276 NEPACDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRN--KENQCGIA 333

Query: 323 RKASYPIA 330
             +SYP+ 
Sbjct: 334 SASSYPLV 341


>gi|255522980|gb|ACU12382.1| RE21773p [Drosophila melanogaster]
          Length = 375

 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 128/308 (41%), Positives = 186/308 (60%), Gaps = 16/308 (5%)

Query: 35  RTYKNQAEKAMRFKIFKKNFRFIEKFNR---EGNQTYKLSLNEFADLTDEEFIASHTGYK 91
           + Y+++ E+  R KIF +N   I K N+   EG  ++KL++N++ADL   EF     G+ 
Sbjct: 72  KNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFN 131

Query: 92  MPT-RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAA 150
               + +    +S+    F  P +   LP+S+DWR +GAVT VK+QG CG CW FS+  A
Sbjct: 132 YTLHKQLRAADESFKGVTFISP-AHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGA 190

Query: 151 VEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQR 207
           +EG    ++G L+SLSEQ ++DCS   G+ GC GG MD+AF YI  + G+  E+ YPY+ 
Sbjct: 191 LEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEA 250

Query: 208 REGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVF 265
            +  C++ +G + A   R + D+P   E  +  AV+   PVSVAIDAS   F++YS GV+
Sbjct: 251 IDDSCHFNKGTVGATD-RGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVY 309

Query: 266 AGP-C-GNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIA 322
             P C   NL+H V +VG+G+   G  YWL+KNSWG  WG+ GFI+M R+      CGIA
Sbjct: 310 NEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRN--KENQCGIA 367

Query: 323 RKASYPIA 330
             +SYP+ 
Sbjct: 368 SASSYPLV 375


>gi|358345461|ref|XP_003636796.1| Cysteine proteinase [Medicago truncatula]
 gi|355502731|gb|AES83934.1| Cysteine proteinase [Medicago truncatula]
          Length = 475

 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 125/323 (38%), Positives = 181/323 (56%), Gaps = 28/323 (8%)

Query: 13  MSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN--REGNQTYKL 70
           +++   E+ +    + W  +  + Y +  E A+R + FK+N ++I + N  R     + L
Sbjct: 38  LNKFPSEEQVVELFQQWKKEHQKFYIHPEEAALRLENFKRNLKYIVERNAMRNSPVGHHL 97

Query: 71  SLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAV 130
            LN FAD+++EEF                      N +    +S    P S+DWR +G V
Sbjct: 98  GLNRFADMSNEEF---------------------KNKFISKVESCDDAPYSLDWRKKGVV 136

Query: 131 TPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-GCYGGWMDDAFS 189
           T VK+QG+CG CW FS+  A+EG+  I TG LISLSEQ+++DC  +  GC GG+MD AF 
Sbjct: 137 TGVKDQGNCGSCWSFSSTGAIEGVNAIVTGDLISLSEQELVDCDTTNDGCEGGYMDYAFE 196

Query: 190 YIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVA 249
           ++I + G+  E  YPY    G CN  +   K   I  Y DV  S+ AL  A  +QP+SV 
Sbjct: 197 WVINNGGIDTEADYPYIGVGGTCNVTKEETKVVTIDGYTDVTQSDSALFCATVKQPISVG 256

Query: 250 IDASSPGFRYYSGGVFAGPCGNN---LNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGF 306
           ID S+  F+ Y+GG++ G C +N   ++HAV IVGYGS     YW++KNSWG +WG  GF
Sbjct: 257 IDGSTLDFQLYTGGIYDGDCSSNPDDIDHAVLIVGYGSDGNQDYWIVKNSWGTSWGIEGF 316

Query: 307 IRMRRDVG-GAGLCGIARKASYP 328
           I +RR+     G+C I   AS+P
Sbjct: 317 IYIRRNTNLKYGVCAINYMASFP 339


>gi|66810271|ref|XP_638859.1| cysteine proteinase 3 [Dictyostelium discoideum AX4]
 gi|166201983|sp|Q23894.2|CYSP3_DICDI RecName: Full=Cysteine proteinase 3; AltName: Full=Cysteine
           proteinase II; Flags: Precursor
 gi|60467526|gb|EAL65548.1| cysteine proteinase 3 [Dictyostelium discoideum AX4]
          Length = 337

 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 134/348 (38%), Positives = 202/348 (58%), Gaps = 39/348 (11%)

Query: 1   MLIIMVTWASL--VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIE 58
           ++++ +++ S   V S   ++DS       WM  + + Y ++ E   R++ FKKN  ++ 
Sbjct: 11  LIVLSISFISAGNVFSHKQYQDSFID----WMRSNNKAYTHK-EFMPRYEEFKKNMDYVH 65

Query: 59  KFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL 118
            +N +G++T  L LN+ ADL++EE+  ++ G +   +              GY     GL
Sbjct: 66  NWNSKGSKTV-LGLNQHADLSNEEYRLNYLGTRAHIK------------LNGYHKRNLGL 112

Query: 119 ---------PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQ 169
                    P ++DWR + AVTPVK+QG CG C+ FS   +VEG+T I+TG+L+SLSEQ 
Sbjct: 113 RLNRPQFKQPLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQN 172

Query: 170 VLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRR-EGYCNWQRGAMKAARIR 225
           +LDCS   G+ GC GG M +AF YII++ GL  E  YPY+ +    C +Q G++ AA+I 
Sbjct: 173 ILDCSSSFGNEGCNGGLMTNAFEYIIKNNGLNSEEQYPYEMKVNDECKFQEGSV-AAKIT 231

Query: 226 SYQDVPT-SELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPC--GNNLNHAVTIVGY 282
           SY+++    E  L+ A+   PVSVAIDAS   F+ Y+ GV+  P     +L+H V  VG 
Sbjct: 232 SYKEIEAGDENDLQNALLLNPVSVAIDASHNSFQLYTAGVYYEPACSSEDLDHGVLAVGM 291

Query: 283 GSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           G+ N   Y+++KNSWG +WG  G+I M R+      CGI+  ASYPIA
Sbjct: 292 GTDNGEDYYIVKNSWGPSWGLNGYIHMARNKDNN--CGISTMASYPIA 337


>gi|294883322|ref|XP_002770704.1| cathepsin L, putative [Perkinsus marinus ATCC 50983]
 gi|239873993|gb|EER02713.1| cathepsin L, putative [Perkinsus marinus ATCC 50983]
          Length = 333

 Score =  231 bits (589), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 128/332 (38%), Positives = 186/332 (56%), Gaps = 22/332 (6%)

Query: 1   MLII--MVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIE 58
           MLII  +V  + L + + L E ++      +  +  + Y+++ E+  R  IF+ N   IE
Sbjct: 1   MLIIISLVLLSILPLVKCLEEGTVELAFMGFQHKFGKNYESKEEEVKRNAIFQANLHHIE 60

Query: 59  KFNREGNQTYKLSLNEFADLTDEEFIASHTG-YKMPTRNISNQSQSYANNWFGYPDSRRG 117
           + N + + +YKL +NE ADLT EEF A   G  KM TR          ++ F        
Sbjct: 61  QVNAK-DLSYKLGVNEHADLTHEEFAALKLGTLKMSTRR---------DDKFVIEADTTQ 110

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           LP S+DWR +  +TPVK+QGSCG CW FS   A+E    I TG+L+SLSEQQ++DCS   
Sbjct: 111 LPTSVDWRNKNVLTPVKDQGSCGSCWAFSTTGALEAQYAIATGKLLSLSEQQLVDCSSGY 170

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNW----QRGAMKAARIRSYQDV 230
           G+ GC GG MDDA+ Y I+S GL  E  Y Y   +  C      +   + A  +  +  +
Sbjct: 171 GNNGCEGGLMDDAYEY-IKSAGLDQESTYSYNGTDDVCQGSLAKRSDGIPAGEVTGFHML 229

Query: 231 PTSELALRYAVSRQPVSVAIDASSPGFRYYSGGVF-AGPCGNNLNHAVTIVGYGSSNEGP 289
             +E +L  A++  PVSVA+ A+ P FR+Y  GV+ +  C   L+H V  VGYG+ N   
Sbjct: 230 DKTEQSLMKALADAPVSVAMYAADPDFRFYKSGVYSSATCNGKLDHGVVAVGYGTENGSD 289

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGI 321
           Y++I+NSWG +WG+ G+  ++R V G G C I
Sbjct: 290 YFIIRNSWGSSWGQAGYFYLKRGVSGYGECNI 321


>gi|33242886|gb|AAQ01147.1| cathepsin [Haplochromis chilotes]
          Length = 334

 Score =  231 bits (589), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/325 (40%), Positives = 182/325 (56%), Gaps = 25/325 (7%)

Query: 17  LHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLN 73
           + E ++ A  ELW     ++YKN  E A R +++  N + I   N E   G  TY+L +N
Sbjct: 22  MFESTLDAHWELWKKTHGKSYKNDVENAHRRELWGNNLKMITVHNLEASMGLHTYELGMN 81

Query: 74  EFADLTDEE---FIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAV 130
              DLT+EE   F AS T    P  +I      +A        S  G+P ++DWR +G V
Sbjct: 82  HMGDLTEEEIMQFFASLT----PPTDIQRAPSPFAGA------SGSGIPDTMDWREKGCV 131

Query: 131 TPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDA 187
           T VK QG+CG CW FSA  A+EG     TG+L+ LS Q ++DCS   G+ GC GG+M  A
Sbjct: 132 TKVKMQGACGSCWAFSAAGALEGQLAKSTGKLVDLSPQNLVDCSGKYGNHGCNGGFMTRA 191

Query: 188 FSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR-QP 245
           F Y+I + G+  +  YPY  R+  C++   A +AA   SYQ +P   E AL+  ++   P
Sbjct: 192 FQYVIDNHGIDSDASYPYIGRDDQCHYNP-ATRAANCSSYQFLPEGDENALKQGLATVGP 250

Query: 246 VSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEG 304
           +SVAIDA  P F +Y  GV+  P C   +NH V  VGYG+ N   YWL+KNSWG  +G+ 
Sbjct: 251 ISVAIDARRPRFSFYRSGVYNDPSCTQKVNHGVLAVGYGTLNGQDYWLVKNSWGTTFGDQ 310

Query: 305 GFIRMRRDVGGAGLCGIARKASYPI 329
           G+IRM R+ G    CGIA    YP+
Sbjct: 311 GYIRMARNTGNQ--CGIALYPCYPV 333


>gi|74222595|dbj|BAE38161.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  231 bits (589), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 131/325 (40%), Positives = 183/325 (56%), Gaps = 26/325 (8%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEF 75
           + + SA+   W +   R Y    E+  R  I++KN R I+  N E   G   + + +N F
Sbjct: 22  DQTFSAEWHQWKSTHRRLYGTNEEEWRR-AIWEKNMRMIQLHNGEYSNGQHGFSMEMNAF 80

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
            D+T+EEF     GY+          +      F  P   + +P+S+DWR +G VTPVKN
Sbjct: 81  GDMTNEEFRQVVNGYR--------HQKHKKGRLFQEPLMLK-IPKSVDWREKGCVTPVKN 131

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYII 192
           QG CG CW FSA   +EG   ++TG+LISLSEQ ++DCS   G++GC GG MD AF YI 
Sbjct: 132 QGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIK 191

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSR-QPVSVAID 251
            + GL  E  YPY+ ++G C + R     A    + D+P  E AL  AV+   P+SVA+D
Sbjct: 192 ENGGLDSEESYPYEAKDGSCKY-RAEFAVANDTGFVDIPQQEKALMKAVATVGPISVAMD 250

Query: 252 ASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYG----SSNEGPYWLIKNSWGQNWGEGG 305
           AS P  ++YS G++  P     NL+H V +VGYG     SN+  YWL+KNSWG  WG  G
Sbjct: 251 ASHPSLQFYSLGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEG 310

Query: 306 FIRMRRDVGGAGLCGIARKASYPIA 330
           +I++ +D      CG+A  ASYP+ 
Sbjct: 311 YIKIAKDRDNH--CGLATAASYPVV 333


>gi|410904751|ref|XP_003965855.1| PREDICTED: cathepsin K-like [Takifugu rubripes]
          Length = 331

 Score =  231 bits (589), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 124/311 (39%), Positives = 184/311 (59%), Gaps = 19/311 (6%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIA 85
           W     R Y  Q E+ +R  +++KN   I+  N+E   G  +Y+L +N   D+T EE + 
Sbjct: 31  WKLTHRREYATQGEEEIRRAVWEKNMNVIDAHNQEAALGMHSYELGMNHLGDMTSEEVLE 90

Query: 86  SHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIF 145
             TG  +P  +  N + + +N       S   LP+ +D+R +G VT VK+QG CG CW F
Sbjct: 91  KMTGLLVPLNDQRNVTMALSN-------SIERLPKHLDYRKKGIVTAVKDQGQCGSCWAF 143

Query: 146 SAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYIIRSQGLTDERVYP 204
           S+  A+EG+   +TG+L+ LS Q ++DC   + GC GG+M +AF Y+  ++G+  E  YP
Sbjct: 144 SSAGALEGMQAKKTGKLVDLSPQNLVDCVKENDGCGGGYMTNAFRYVATNRGIDSEASYP 203

Query: 205 YQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVAIDASSPGFRYYSG 262
           Y  +E  C ++    KAA   SY++VP  +E  L YA+ +  P++V IDA+   F+ YS 
Sbjct: 204 YVAQEQSCQYKESG-KAAECSSYEEVPQGNEKQLAYALFKHGPIAVGIDATLSTFQLYSK 262

Query: 263 GVFAGPCGN--NLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRDVGGAGLC 319
           GV+  P  N  N+NHAV +VGYG ++ G  YW++KNSW  NWG GG++ M R+ G   LC
Sbjct: 263 GVYYDPNCNPENINHAVLLVGYGVNSRGQHYWIVKNSWSTNWGNGGYVLMARNRG--NLC 320

Query: 320 GIARKASYPIA 330
           GIA  ASYP+ 
Sbjct: 321 GIANLASYPLV 331


>gi|91992508|gb|ABE72970.1| cathepsin L [Aedes aegypti]
          Length = 339

 Score =  231 bits (589), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/341 (39%), Positives = 202/341 (59%), Gaps = 15/341 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +LI++V + +   + +L+E  +  +   +  Q  + Y ++ E+ +R KI+ +N   I K 
Sbjct: 3   ILILLVAFVAAANAVSLYE-LVKEEWNAFKLQHRKNYDSETEERIRLKIYVQNKHKIAKH 61

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N+    G + Y+L +N++ADL  EEF+ +  G+       S +             +   
Sbjct: 62  NQRFDLGQEKYRLRVNKYADLLHEEFVQTVNGFNRTDSKKSLKGVRIEEPVTFIEPANVE 121

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           +P ++DWR +GAVTPVK+QG CG CW FSA  A+EG    +TG+L+SLSEQ ++DCS   
Sbjct: 122 VPTTVDWRKKGAVTPVKDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSGKY 181

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-S 233
           G+ GC GG MD AF YI  + G+  E+ YPY+  +  C++   A+ A   + Y D+P   
Sbjct: 182 GNNGCNGGMMDYAFQYIKDNGGIDTEKSYPYEAIDDTCHFNPKAVGATD-KGYVDIPQGD 240

Query: 234 ELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGN-NLNHAVTIVGYGSSNEGP- 289
           E AL+ A++   PVS+AIDAS   F++YS GV+  P C + NL+H V  VGYG+S EG  
Sbjct: 241 EEALKKALATVGPVSIAIDASHESFQFYSEGVYYEPQCDSENLDHGVLAVGYGTSEEGED 300

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           YWL+KNSWG  WG+ G+++M R+      CG+A  ASYP+ 
Sbjct: 301 YWLVKNSWGTTWGDQGYVKMARNHDNH--CGVATCASYPLV 339


>gi|195583187|ref|XP_002081405.1| GD10995 [Drosophila simulans]
 gi|194193414|gb|EDX06990.1| GD10995 [Drosophila simulans]
          Length = 341

 Score =  231 bits (589), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 128/308 (41%), Positives = 185/308 (60%), Gaps = 16/308 (5%)

Query: 35  RTYKNQAEKAMRFKIFKKNFRFIEKFNR---EGNQTYKLSLNEFADLTDEEFIASHTGYK 91
           + Y++  E+  R KIF +N   I K N+   EG  ++KL++N++ADL   EF     G+ 
Sbjct: 38  KNYQDDTEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFN 97

Query: 92  MPT-RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAA 150
               + +    +S+    F  P +   LP+S+DWR +GAVT VK+QG CG CW FS+  A
Sbjct: 98  YTLHKQLRAADESFKGVTFISP-AHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGA 156

Query: 151 VEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQR 207
           +EG    ++G L+SLSEQ ++DCS   G+ GC GG MD+AF YI  + G+  E+ YPY+ 
Sbjct: 157 LEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEA 216

Query: 208 REGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVF 265
            +  C++ +G + A   R + D+P   E  +  AV+   PVSVAIDAS   F++YS GV+
Sbjct: 217 IDDSCHFNKGTIGATD-RGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVY 275

Query: 266 AGP-C-GNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIA 322
             P C   NL+H V +VG+G+   G  YWL+KNSWG  WG+ GFI+M R+      CGIA
Sbjct: 276 NEPQCDAQNLDHGVLVVGFGTDESGDDYWLVKNSWGTTWGDKGFIKMLRN--KENQCGIA 333

Query: 323 RKASYPIA 330
             +SYP+ 
Sbjct: 334 SASSYPLV 341


>gi|222625810|gb|EEE59942.1| hypothetical protein OsJ_12596 [Oryza sativa Japonica Group]
          Length = 213

 Score =  231 bits (589), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 125/214 (58%), Positives = 152/214 (71%), Gaps = 7/214 (3%)

Query: 122 IDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRG 178
           +DWRA GAVT VK+QGSCGCCW FSAVAAVEG+ KIRTG+L+SLSEQ+++DC      +G
Sbjct: 1   MDWRAMGAVTGVKDQGSCGCCWAFSAVAAVEGLAKIRTGQLVSLSEQELVDCDVRGEDQG 60

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS-ELAL 237
           C GG MD AF YI R  GL  E  YPY R             AA IR +QDVP++ E AL
Sbjct: 61  CEGGLMDTAFQYIARRGGLAAESSYPY-RGVDGACRAAAGRAAASIRGFQDVPSNDEGAL 119

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGP-YWLIKN 295
             AV+RQPVSVAI+ +   FR+Y  GV  G  CG  LNHAVT VGYG++++G  YWL+KN
Sbjct: 120 MAAVARQPVSVAINGAGYVFRFYDRGVLGGAGCGTELNHAVTAVGYGTASDGTGYWLMKN 179

Query: 296 SWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           SWG +WGEGG++R+RR VG  G CGIA+ ASYP+
Sbjct: 180 SWGASWGEGGYVRIRRGVGREGACGIAQMASYPV 213


>gi|402770507|gb|AFQ98388.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 126/322 (39%), Positives = 180/322 (55%), Gaps = 37/322 (11%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEF 83
           E +     +TY++  E+ +RFKIF +N   I K N +   G  +YKL +N+F DL   EF
Sbjct: 28  EAFKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEF 87

Query: 84  IASHTGYK----------MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPV 133
                GY           +P  N+++ S                LP+++DWR +GAVTPV
Sbjct: 88  ARIFNGYHGSRKSGGSTFLPPANVNDSS----------------LPKAVDWRKKGAVTPV 131

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSY 190
           K+QG CG CW FS   ++EG   ++ G L+SLSEQ ++DCS   G+ GC GG M+DAF Y
Sbjct: 132 KDQGQCGSCWAFSTTGSLEGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKY 191

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQ-PVSVA 249
           I  + G+  E+ YPY+  +G C +++  + A      +     E  L+ AV+   P+SVA
Sbjct: 192 IKANDGIDTEKSYPYEAVDGECRFKKEDVGATDTGYVEIKAGCEDDLKKAVATVGPISVA 251

Query: 250 IDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFI 307
           IDAS   F+ YS GV+  P     +L+H V +VGYG      YWL+KNSW ++WG+ G+I
Sbjct: 252 IDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYI 311

Query: 308 RMRRDVGGAGLCGIARKASYPI 329
            M RD      CGIA +ASYP+
Sbjct: 312 LMSRD--NNNQCGIASQASYPL 331


>gi|116794072|gb|ABK26996.1| unknown [Picea sitchensis]
          Length = 367

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 123/312 (39%), Positives = 176/312 (56%), Gaps = 12/312 (3%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHT 88
           W+ +  + Y +  EKA R +IF+ N ++I   N+  N +++L LN+FADLT+EEF   + 
Sbjct: 46  WLGRHGKLYGSHEEKARRLQIFRTNLQYIHAHNKNSNSSFRLGLNKFADLTNEEFKTRYF 105

Query: 89  GYKMP-------TRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGC 141
           G           T     + +       G   S   +  S+DWR +GAVT VK+Q  CG 
Sbjct: 106 GKNSKQWRDRRRTELEGAELRPVLKQTVGSQSSSCSIASSLDWRKKGAVTGVKDQAQCGS 165

Query: 142 CWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-GCYGGWMDDAFSYIIRSQGLTDE 200
           CW FS   A+EG+  I TG+L+SLSEQ+++ C  +  GC GG MD AF+++I++ G+  E
Sbjct: 166 CWAFSTTGAIEGVNFISTGKLVSLSEQELVACDATNYGCEGGDMDYAFTWVIQNGGIDTE 225

Query: 201 RVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGFRYY 260
           + Y Y   +  CN  + A K   I  Y DV   + AL  A   QPVSV ID S+  F+ Y
Sbjct: 226 KDYSYTGVDSTCNTNKEAKKIVSIDGYTDVSPDDSALLCAAGSQPVSVGIDGSAIDFQLY 285

Query: 261 SGGVFAGPCGNN---LNHAVTIVGYGSSNEGPYWLIKNSWGQNWG-EGGFIRMRRDVGGA 316
           +GG++ G C  N   ++HAV +VGY + N   YW++KNSWG +WG EG F  +R      
Sbjct: 286 TGGIYDGDCSGNPDDIDHAVLVVGYSAKNGKDYWIVKNSWGTDWGLEGYFYILRNTELPY 345

Query: 317 GLCGIARKASYP 328
           G+C I   ASYP
Sbjct: 346 GVCAINAMASYP 357


>gi|125811033|ref|XP_001361727.1| GA25021 [Drosophila pseudoobscura pseudoobscura]
 gi|54636904|gb|EAL26307.1| GA25021 [Drosophila pseudoobscura pseudoobscura]
          Length = 341

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 123/308 (39%), Positives = 187/308 (60%), Gaps = 16/308 (5%)

Query: 35  RTYKNQAEKAMRFKIFKKNFRFIEKFNR---EGNQTYKLSLNEFADLTDEEFIASHTGYK 91
           + Y+++ E+  R KIF +N   I K N+    G  ++K+++N++AD+   EF ++  G+ 
Sbjct: 38  KNYQDETEERFRLKIFNENKHKIAKHNQLWATGAVSFKMAVNKYADMLHHEFYSTMNGFN 97

Query: 92  MPT-RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAA 150
               + + N  +S+    F  P+    LP+ +DWR +GAVT VK+QG CG CW FS+  A
Sbjct: 98  YTLHKQLRNADESFKGVTFISPE-HVTLPKQVDWRTKGAVTDVKDQGHCGSCWAFSSTGA 156

Query: 151 VEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQR 207
           +EG    ++G L+SLSEQ ++DCS   G+ GC GG MD+AF YI  + G+  E+ YPY+ 
Sbjct: 157 LEGQHYRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEA 216

Query: 208 REGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR-QPVSVAIDASSPGFRYYSGGVF 265
            +  C++ +G + A   R + D+P  +E  +  AV+   PV+VAIDAS   F++YS GV+
Sbjct: 217 IDDSCHFNKGTIGATD-RGFVDIPQGNEKKMAEAVATIGPVAVAIDASHESFQFYSEGVY 275

Query: 266 AGPC--GNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIA 322
             P     NL+H V +VG+G+   G  YWL+KNSWG  WG+ GFI+M R+      CGIA
Sbjct: 276 NEPACDAQNLDHGVLVVGFGTDESGQDYWLVKNSWGTTWGDKGFIKMLRN--KENQCGIA 333

Query: 323 RKASYPIA 330
             +SYP+ 
Sbjct: 334 SASSYPLV 341


>gi|357216861|gb|AET71138.1| cysteine peptidase isoform b [Sphenophorus levis]
          Length = 324

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 132/335 (39%), Positives = 185/335 (55%), Gaps = 27/335 (8%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L+++   A+L+     H  S   KH        +TYKNQAE+  RF IF++N R IE  N
Sbjct: 9   LLVVAVSATLLKEDGAHFQSFKLKH-------GKTYKNQAEETKRFAIFRENLRKIEAHN 61

Query: 62  ---REGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL 118
              ++G  +Y   +N+FAD+T  EF A      M    +  +    A   F   D    +
Sbjct: 62  AEYKQGIHSYTQGINKFADMTRAEFKA------MLATQVKTKPSIVATKTFQLADGV-SV 114

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--S 176
           P SIDWR+R  VTP+K+Q  CG CW F+ V + EG   + TG+L   SEQQ++DC+   +
Sbjct: 115 PESIDWRSRNVVTPIKDQAQCGSCWAFAVVGSTEGAYALSTGKLTRFSEQQLVDCTTDLN 174

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELA 236
            GC GG++DD F Y I++ GL  E  YPY   +GYC+++   +   ++ SY  VP +E A
Sbjct: 175 YGCDGGYLDDTFPY-IQTNGLELESDYPYTGYDGYCSYESSKV-VTKVSSYVSVPANEQA 232

Query: 237 LRYAV-SRQPVSVAIDASSPGFRYYSGGVFAGPCGNN-LNHAVTIVGYGSSNEGPYWLIK 294
           L  AV +  PV++AI+A    F Y+SG +    C    L+H V  VGY S N   YWLIK
Sbjct: 233 LLEAVGTAGPVAIAINADDLQF-YFSGIIDDKYCDPEYLDHGVLAVGYDSENGRDYWLIK 291

Query: 295 NSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           NSWG +WGE G+ R  R   G  +CG+   A YP+
Sbjct: 292 NSWGADWGESGYFRFLR---GQNICGVKEDAVYPL 323


>gi|330434686|gb|AEC22811.1| cathepsin L [Macrobrachium nipponense]
          Length = 342

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 127/315 (40%), Positives = 191/315 (60%), Gaps = 15/315 (4%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNR---EGNQTYKLSLNEFADLTDEEF 83
           E +  + ++ Y++  E+  R KIF +N + I   N+    G++TYKL +N++ D+   EF
Sbjct: 30  ESFKFEHSKKYESDTEETFRMKIFAENKQKIAAHNKLYHTGSKTYKLGMNKYGDMLHHEF 89

Query: 84  IASHTGYKMPTRNISNQS-QSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCC 142
           +    G++  T     ++ + +    F  P     +P+S+DWR +GAVT VK+QGSCG C
Sbjct: 90  VNMMNGFRANTSGAGYKANRGFQGAHFVEPPEDVVMPKSVDWREKGAVTEVKDQGSCGSC 149

Query: 143 WIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTD 199
           W FSA  A+EG    +TG L+SLSEQ ++DCS   G+ GC GG MD+AF YI  + G+  
Sbjct: 150 WAFSATGALEGQHYRQTGDLVSLSEQNLVDCSSKFGNNGCNGGLMDNAFQYIKVNGGIDT 209

Query: 200 ERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSR-QPVSVAIDASSPGF 257
           E+ YPY+  +  C +   A   A  R + DV   +E AL+ A++   PVSVAIDAS   F
Sbjct: 210 EKSYPYEAEDEPCRYNP-ANAGADDRGFVDVREGNENALKKAIATIGPVSVAIDASQDSF 268

Query: 258 RYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVG 314
           ++Y  GV++ P     NL+H V  VGYG++ +G  YWL+KNSW ++WG+ G+I++ R+  
Sbjct: 269 QFYQHGVYSDPDCSAENLDHGVLAVGYGTTEDGQDYWLVKNSWSKSWGDQGYIKIARNQN 328

Query: 315 GAGLCGIARKASYPI 329
              +CGIA  ASYP+
Sbjct: 329 --NMCGIASAASYPL 341


>gi|195484843|ref|XP_002090843.1| GE12574 [Drosophila yakuba]
 gi|194176944|gb|EDW90555.1| GE12574 [Drosophila yakuba]
          Length = 341

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 128/308 (41%), Positives = 185/308 (60%), Gaps = 16/308 (5%)

Query: 35  RTYKNQAEKAMRFKIFKKNFRFIEKFNR---EGNQTYKLSLNEFADLTDEEFIASHTGYK 91
           + Y++  E+  R KIF +N   I K N+   EG  ++KL++N++ADL   EF     G+ 
Sbjct: 38  KNYQDDTEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFN 97

Query: 92  MPT-RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAA 150
               + +     S+    F  P +   LP+S+DWR++GAVT VK+QG CG CW FS+  A
Sbjct: 98  YTLHKQLRATDDSFKGVTFISP-AHVTLPKSVDWRSKGAVTAVKDQGHCGSCWAFSSTGA 156

Query: 151 VEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQR 207
           +EG    ++G L+SLSEQ ++DCS   G+ GC GG MD+AF YI  + G+  E+ YPY+ 
Sbjct: 157 LEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEA 216

Query: 208 REGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVF 265
            +  C++ +G + A   R + D+P   E  +  AV+   PVSVAIDAS   F++YS GV+
Sbjct: 217 IDDSCHFNKGTIGATD-RGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVY 275

Query: 266 AGP-C-GNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIA 322
             P C   NL+H V +VG+G+   G  YWL+KNSWG  WG+ GFI+M R+      CGIA
Sbjct: 276 NEPQCDAQNLDHGVLVVGFGTDESGDDYWLVKNSWGTTWGDKGFIKMLRNKDNQ--CGIA 333

Query: 323 RKASYPIA 330
             +SYP+ 
Sbjct: 334 SASSYPLV 341


>gi|308322193|gb|ADO28234.1| cathepsin K [Ictalurus furcatus]
          Length = 331

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 136/338 (40%), Positives = 198/338 (58%), Gaps = 23/338 (6%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           ML +++  A   +S  L   S+    E W     + Y    E+A+R  +++KN R IE  
Sbjct: 7   MLFLLLGSA---VSHPLDSLSLDESWENWKTTHRKEYNGLGEEAIRRSVWEKNMRLIESH 63

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N+E   G  TY+L +N   D+T EE      G ++P  N  +   +Y      YPDS   
Sbjct: 64  NQEYELGLHTYELGMNHLGDMTTEEVAEKLLGLQVPMDN--DPLNTY------YPDSLDK 115

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGS 176
           LP+SID+R  G VTPV+NQGSCG CW FS+V A+EG     TG+L++LS Q ++DC + +
Sbjct: 116 LPKSIDYRKLGYVTPVRNQGSCGSCWAFSSVGALEGQLMKTTGKLVNLSPQNLVDCVTEN 175

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SEL 235
            GC GG+M +AFSY+  + G+  E  YPY  ++  C + +   KAA  R +++V   SE 
Sbjct: 176 DGCGGGYMTNAFSYVRDNGGIDSEEAYPYVGQDQQCAYNKSG-KAAECRRFKEVKKGSEY 234

Query: 236 ALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CG-NNLNHAVTIVGYGSSNEG-PYW 291
           AL  AV++  PVSV IDA    F++Y  GV+  P C   ++NHAV  VGYG++ +G  +W
Sbjct: 235 ALASAVAKVGPVSVGIDAMQSTFQFYKRGVYYDPNCDKESINHAVLAVGYGATPKGKKHW 294

Query: 292 LIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           ++KNSWG+ WG  G++ M R+   A  CGIA  AS+P+
Sbjct: 295 IVKNSWGEEWGMKGYVLMARNRNNA--CGIANLASFPV 330


>gi|1483570|emb|CAA68066.1| cathepsin l [Litopenaeus vannamei]
          Length = 328

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 128/313 (40%), Positives = 184/313 (58%), Gaps = 24/313 (7%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEFADLTDEEFIA 85
           + A+  R Y +  E+  R  +F++N +FI+  N     G  T+ L +N+F D+T EEF A
Sbjct: 27  FKAEHGRRYASVQEERYRLSVFEQNQQFIDDHNARFENGEVTFTLQMNQFGDMTSEEFTA 86

Query: 86  SHTGY-KMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWI 144
           +  G+  +P+R  +   ++         D    LP+ +DWR +GAVTPVK+Q  CG CW 
Sbjct: 87  TMNGFLNVPSRRPTAILRA---------DPDETLPKEVDWRTKGAVTPVKDQKQCGSCWA 137

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDER 201
           FS   ++EG   ++ G+L+SLSEQ ++DCS   G+ GC GG MD AF YI  ++G+  E 
Sbjct: 138 FSTTGSLEGQHFLKDGKLVSLSEQNLVDCSDKFGNMGCMGGLMDQAFRYIKANKGIDTED 197

Query: 202 VYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR-QPVSVAIDASSPGFRY 259
            YPY+ ++G C +    + A     Y DV   SE AL+ AV+   P+SVAIDAS P F++
Sbjct: 198 SYPYEAQDGKCRFDASNVGATDT-GYVDVEHGSESALKKAVATIGPISVAIDASQPSFQF 256

Query: 260 YSGGVF--AGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRDVGGA 316
           Y  GV+   G     L+H V  VGYG + +G  YWL+KNSW  +WG  G+I+M RD    
Sbjct: 257 YHDGVYYEEGCSSTMLDHGVLAVGYGETEKGEAYWLVKNSWNTSWGNKGYIQMSRDKKNN 316

Query: 317 GLCGIARKASYPI 329
             CGIA +ASYP+
Sbjct: 317 --CGIASQASYPL 327


>gi|194757786|ref|XP_001961143.1| GF13722 [Drosophila ananassae]
 gi|190622441|gb|EDV37965.1| GF13722 [Drosophila ananassae]
          Length = 417

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 127/308 (41%), Positives = 184/308 (59%), Gaps = 16/308 (5%)

Query: 35  RTYKNQAEKAMRFKIFKKNFRFIEKFNR---EGNQTYKLSLNEFADLTDEEFIASHTGYK 91
           + Y ++ E+  R KIF +N   I K N+    G  +YKL++N++AD+   EF     G+ 
Sbjct: 114 KNYLDETEERFRLKIFNENKHKIAKHNQLWASGKVSYKLAVNKYADMLHHEFRQLMNGFN 173

Query: 92  MPT-RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAA 150
               + +    +S+    F  P+    LP+S+DWR +GAVT VK+QG CG CW FS+  A
Sbjct: 174 YTLHKELRAADESFKGVTFISPE-HVTLPKSVDWRDKGAVTGVKDQGHCGSCWAFSSTGA 232

Query: 151 VEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQR 207
           +EG    ++G L+SLSEQ ++DCS   G+ GC GG MD+AF YI  + G+  E+ YPY+ 
Sbjct: 233 LEGQHYRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEA 292

Query: 208 REGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR-QPVSVAIDASSPGFRYYSGGVF 265
            +  C++ +G + A   R + D+P  +E  L  AV+   PVSVAIDAS   F++YS GV+
Sbjct: 293 LDDSCHFNKGTIGATD-RGFVDIPQGNEKKLAEAVATIGPVSVAIDASHESFQFYSEGVY 351

Query: 266 AGPC--GNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIA 322
             P     NL+H V +VG+G+   G  YWL+KNSWG  WG+ GFI+M R+      CGIA
Sbjct: 352 VEPACDAQNLDHGVLVVGFGTDESGQDYWLVKNSWGTTWGDKGFIKMLRNKDNQ--CGIA 409

Query: 323 RKASYPIA 330
             +SYP+ 
Sbjct: 410 SASSYPLV 417


>gi|318065049|ref|NP_001187379.1| cathepsin K precursor [Ictalurus punctatus]
 gi|308322859|gb|ADO28567.1| cathepsin K [Ictalurus punctatus]
          Length = 331

 Score =  231 bits (588), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 136/337 (40%), Positives = 196/337 (58%), Gaps = 21/337 (6%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L++ +   S V S  L   S+    E W     + Y    E A+R  +++KN R IE  N
Sbjct: 6   LVLFLLLDSAV-SHLLDSLSLDESWENWKTTHRKEYNGLGEDAIRRSVWEKNMRLIESHN 64

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL 118
           +E   G  TY+L +N   D+T EE      G ++P  N  +   +Y      YPDS   L
Sbjct: 65  QEYELGLHTYELGMNHLGDMTTEEVAEKLLGLQVPMDN--DPLNTY------YPDSLDKL 116

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSR 177
           P+SID+R  G VTPV+NQGSCG CW FS+V A+EG     TG+L++LS Q ++DC + + 
Sbjct: 117 PKSIDYRKLGYVTPVRNQGSCGSCWAFSSVGALEGQLMKTTGKLVNLSPQNLVDCVTEND 176

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GG+M +AFSY+  + G+  E  YPY  ++  C + +   KAA  R +++V   SE A
Sbjct: 177 GCGGGYMTNAFSYVRDNGGIDSEEAYPYVGQDQQCAYNKSG-KAAECRRFKEVKKGSEYA 235

Query: 237 LRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CG-NNLNHAVTIVGYGSSNEG-PYWL 292
           L  AV++  PVSV IDA    F++Y  GV+  P C   ++NHAV  VGYG++ +G  +W+
Sbjct: 236 LASAVAKVGPVSVGIDAMQSTFQFYKRGVYYDPNCDKESINHAVLAVGYGATPKGKKHWI 295

Query: 293 IKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           +KNSWG+ WG  G++ M R+   A  CGIA  AS+P+
Sbjct: 296 VKNSWGEEWGMKGYVLMARNRNNA--CGIANLASFPV 330


>gi|74142447|dbj|BAE31977.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  231 bits (588), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 130/325 (40%), Positives = 183/325 (56%), Gaps = 26/325 (8%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEF 75
           + + SA+   W +   R Y    E+  R  I++KN R I+  N E   G   + + +N F
Sbjct: 22  DQTFSAEWHQWKSTHRRLYGTNEEEWRR-AIWEKNMRMIQLHNGEYSNGQHGFSMEMNAF 80

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
            D+T+EEF     GY+          +      F  P   + +P+S+DWR +G VTPVKN
Sbjct: 81  GDMTNEEFRQVVNGYR--------HQKHKKGRLFQEPLMLK-IPKSVDWREKGCVTPVKN 131

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYII 192
           +G CG CW FSA   +EG   ++TG+LISLSEQ ++DCS   G++GC GG MD AF YI 
Sbjct: 132 KGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIK 191

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSR-QPVSVAID 251
            + GL  E  YPY+ ++G C + R     A    + D+P  E AL  AV+   P+SVA+D
Sbjct: 192 ENGGLDSEESYPYEAKDGSCKY-RAEFAVANDTGFVDIPQQEKALMKAVATVGPISVAMD 250

Query: 252 ASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYG----SSNEGPYWLIKNSWGQNWGEGG 305
           AS P  ++YS G++  P     NL+H V +VGYG     SN+  YWL+KNSWG  WG  G
Sbjct: 251 ASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEG 310

Query: 306 FIRMRRDVGGAGLCGIARKASYPIA 330
           +I++ +D      CG+A  ASYP+ 
Sbjct: 311 YIKIAKDRDNH--CGLATAASYPVV 333


>gi|17062058|gb|AAL34984.1|AF320565_1 cathepsine L-like cysteine protease [Rhodnius prolixus]
          Length = 316

 Score =  231 bits (588), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 130/312 (41%), Positives = 182/312 (58%), Gaps = 21/312 (6%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIA 85
           + A   + Y+NQ E+  R K+F  N + I++ N +   G  +YK+ +N   DL   EF A
Sbjct: 16  FKAMHGKNYRNQFEEIFRMKVFIDNKKKIDEHNAKYELGEASYKMKMNHLGDLMVHEFKA 75

Query: 86  SHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIF 145
              G+K  T N     + Y         S   LP+S+DWR RGAVTPVK+QG CG CW F
Sbjct: 76  LMNGFK-KTPNAERNGKIYV-------PSNENLPKSVDWRQRGAVTPVKDQGHCGSCWSF 127

Query: 146 SAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERV 202
           SA  ++EG   ++TGRL+SLSEQ ++DCS   G+ GC GG M+ AF Y+  ++G+  E  
Sbjct: 128 SATGSLEGQLFLKTGRLVSLSEQNLVDCSKTYGNSGCEGGLMNQAFQYVRDNKGIDTEAS 187

Query: 203 YPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQ-PVSVAIDASSPGFRYY 260
           YPY+ RE  C ++   +     + Y D+   SE  L+ AV+   P+SV IDAS   F++Y
Sbjct: 188 YPYEARENNCRFKEDKVGGTD-KGYVDILEASEKDLQSAVATVGPISVRIDASHESFQFY 246

Query: 261 SGGVFAGP-CG-NNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGL 318
           S GV+    C  + L+H V  VGYG+ N   YWL+KNSWG +WGE G+I++ R+      
Sbjct: 247 SEGVYKEQYCSPSQLDHGVLTVGYGTENGQDYWLVKNSWGPSWGESGYIKIARN--HKNH 304

Query: 319 CGIARKASYPIA 330
           CGIA  ASYP+ 
Sbjct: 305 CGIASMASYPVV 316


>gi|156938919|gb|ABU97481.1| cathepsin L-like cysteine protease [Tyrophagus putrescentiae]
          Length = 333

 Score =  231 bits (588), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 134/328 (40%), Positives = 193/328 (58%), Gaps = 24/328 (7%)

Query: 14  SRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKL 70
           S  + E  + A   L+  +  R+Y N  E+  R ++F  N  FI   NRE   GN+ + +
Sbjct: 17  SELISEGELEAHFNLFKTRFGRSYANFEEEIFRKRVFASNLEFIFNHNREFFAGNKNFNV 76

Query: 71  SLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDW-RARGA 129
           ++N F D+++ EF A   G     R+   QS         +  S  GLP ++DW + +  
Sbjct: 77  AVNNFTDMSNTEFRARFNGL----RHSGVQSAPAI-----HSASAEGLPATVDWTKVKNV 127

Query: 130 VTPVKNQGSCGCCW-IFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMD 185
           VTP+KNQ  CG CW  FSAVA++EG   ++TG+L+SLSEQ ++DCS   G+ GC GG MD
Sbjct: 128 VTPIKNQEQCGSCWAFFSAVASMEGQHGLKTGKLVSLSEQNLVDCSAAEGNMGCEGGLMD 187

Query: 186 DAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ 244
            AF Y+I ++G+  E  YPY+  +    +++ ++  A I+SY DV T SE +L+ AV+  
Sbjct: 188 QAFQYVIANKGIDTEMSYPYKAIDESWEFKKNSV-GATIKSYVDVKTGSESSLQSAVATV 246

Query: 245 -PVSVAIDASSPGFRYYSGGVFAGP-CGNN-LNHAVTIVGYGSSNEGPYWLIKNSWGQNW 301
            P+SV IDAS   F++YS GV+  P C    L+H VT VGYG+ N  PYW +KNSWG +W
Sbjct: 247 GPISVGIDASQLSFQFYSSGVYEEPACSTTILDHGVTAVGYGALNGTPYWKVKNSWGTSW 306

Query: 302 GEGGFIRMRRDVGGAGLCGIARKASYPI 329
           G  G+I M R+      CGIA  AS+P+
Sbjct: 307 GMSGYIFMSRN--KQNQCGIATAASWPV 332


>gi|2804262|dbj|BAA24442.1| cysteine proteinase [Sitophilus zeamais]
          Length = 338

 Score =  230 bits (587), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 125/310 (40%), Positives = 188/310 (60%), Gaps = 15/310 (4%)

Query: 32  QSARTYKNQAEKAMRFKIFKKNFRFIEKFNR---EGNQTYKLSLNEFADLTDEEFIASHT 88
           Q ++ Y ++ E+  R KIF +N   + K N+   +G   +KL LN++AD+   EF+++  
Sbjct: 33  QHSKNYDSETEERFRMKIFMENAHKVAKHNKLFSQGFVKFKLGLNKYADMLHHEFVSTLN 92

Query: 89  GYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAV 148
           G+     NI   S       F  P + + LP ++DWR +GAVT VK+QG CG CW FSA 
Sbjct: 93  GFNKTKNNILKGSDLNDAVRFISPANVK-LPDTVDWRDKGAVTEVKDQGHCGSCWSFSAT 151

Query: 149 AAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPY 205
            ++EG    +TG+L+SLSEQ ++DCS   G+ GC GG MD+AF YI  + G+  E+ YPY
Sbjct: 152 GSLEGQHFRKTGKLVSLSEQNLVDCSGRYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPY 211

Query: 206 QRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQ-PVSVAIDASSPGFRYYSGG 263
              +  C++ +     A  + + D+   +E  L+ AV+   PVS+AIDAS   F+ YS G
Sbjct: 212 LAEDEKCHY-KAQNSGATDKGFVDIEEANEDDLKAAVATVGPVSIAIDASHETFQLYSDG 270

Query: 264 VFAGP--CGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCG 320
           V++ P      L+H V +VGYG+S++G  YWL+KNSWG +WG  G+I+M R+     +CG
Sbjct: 271 VYSDPECSSQELDHGVLVVGYGTSDDGQDYWLVKNSWGPSWGLNGYIKMARNQD--NMCG 328

Query: 321 IARKASYPIA 330
           +A +ASYP+ 
Sbjct: 329 VASQASYPLV 338


>gi|405971603|gb|EKC36430.1| Cathepsin L [Crassostrea gigas]
          Length = 360

 Score =  230 bits (587), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 128/306 (41%), Positives = 179/306 (58%), Gaps = 20/306 (6%)

Query: 35  RTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIASHTGYK 91
           +TY    E++ RF+IF++N + IE+ N+    G ++Y L +N+F+DL  EEF+  +   K
Sbjct: 65  KTYDALEEESRRFEIFRENVQKIEEHNKLYHLGKKSYYLGVNQFSDLKHEEFVKYNGLKK 124

Query: 92  MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAV 151
              ++    S   ANN           P S+DWR +G VT VKNQG CG CW FS   ++
Sbjct: 125 TSLKDGGCSSYLAANNLVE--------PDSVDWRKKGYVTDVKNQGQCGSCWSFSTTGSL 176

Query: 152 EGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRR 208
           EG    ++G+L+SLSE Q++DCS   G+ GC GG MD+AF YI    GL  E  YPY+ +
Sbjct: 177 EGQHFRKSGKLVSLSESQLVDCSQSFGNEGCNGGLMDNAFKYIKSVGGLESEEDYPYKPK 236

Query: 209 EGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAG 267
           +G C +    + A           SE AL+ AVS   PVSVAIDAS   F+ Y+GGV+  
Sbjct: 237 QGTCKFDDTKVAATDTGCVDVESGSESALKKAVSEVGPVSVAIDASHSSFQSYAGGVYDE 296

Query: 268 P--CGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARK 324
           P      L+H V  VGYG+ ++G  YW++KNSWG  WGE G+++M R+      CGIA +
Sbjct: 297 PECSSEQLDHGVLCVGYGTDDQGQDYWIVKNSWGAEWGEDGYVKMSRN--KKNQCGIATQ 354

Query: 325 ASYPIA 330
           ASYP+ 
Sbjct: 355 ASYPLV 360


>gi|47169030|pdb|1S4V|A Chain A, The 2.0 A Crystal Structure Of The Kdel-Tailed Cysteine
           Endopeptidase Functioning In Programmed Cell Death Of
           Ricinus Communis Endosperm
 gi|47169031|pdb|1S4V|B Chain B, The 2.0 A Crystal Structure Of The Kdel-Tailed Cysteine
           Endopeptidase Functioning In Programmed Cell Death Of
           Ricinus Communis Endosperm
          Length = 229

 Score =  230 bits (587), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 113/217 (52%), Positives = 148/217 (68%), Gaps = 5/217 (2%)

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-- 175
           +P S+DWR +GAVT VK+QG CG CW FS + AVEGI +I+T +L+SLSEQ+++DC    
Sbjct: 2   VPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQ 61

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSE 234
           ++GC GG MD AF +I +  G+T E  YPY+  +G C+  +    A  I  +++VP   E
Sbjct: 62  NQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDE 121

Query: 235 LALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLI 293
            AL  AV+ QPVSVAIDA    F++YS GVF G CG  L+H V IVGYG++ +G  YW +
Sbjct: 122 NALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTELDHGVAIVGYGTTIDGTKYWTV 181

Query: 294 KNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
           KNSWG  WGE G+IRM R +    GLCGIA +ASYPI
Sbjct: 182 KNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPI 218


>gi|94448674|emb|CAI91575.1| cathepsin L2 [Lubomirskia baicalensis]
          Length = 324

 Score =  230 bits (587), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 136/338 (40%), Positives = 193/338 (57%), Gaps = 27/338 (7%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L+I+ T  + V +        S +   W A+  ++Y+N  E+ +R   ++ N ++I++ N
Sbjct: 3   LLILCTLIAAVAAFDF-----SKELRAWKAEHGKSYRNHKEEMLRHVTWQANKKYIDEHN 57

Query: 62  RE-GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSR-RGLP 119
           +  G   Y L +N+F DL + EF + + GY+M   N   + + +       P +R + LP
Sbjct: 58  QHAGVFGYTLKMNQFGDLENSEFKSLYNGYRM--SNAPRKGKPFV------PAARVQDLP 109

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GS 176
            S+DW  +G VTPVKNQG CG CW FSA  ++EG     TG L+SLSEQ ++DCS   G+
Sbjct: 110 ASVDWSKKGWVTPVKNQGQCGSCWSFSATGSMEGQHFNATGTLMSLSEQNLVDCSAAEGN 169

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSEL 235
            GC GG MDDAF Y+I++ G+  E  YPY+  +  C +    +  A I  Y DV   SE 
Sbjct: 170 HGCNGGLMDDAFEYVIKNNGIDTEASYPYRAVDSTCKFNTADV-GATISGYVDVTKDSES 228

Query: 236 ALRYAVSR-QPVSVAIDASSPGFRYYSGGVFAGPC---GNNLNHAVTIVGYGSSNEGPYW 291
            L+ AV+   PVSVAIDAS   F++YS GV+  P      NL+H V  VGYG+     YW
Sbjct: 229 DLQVAVATIGPVSVAIDASHISFQFYSSGVY-DPLICSSTNLDHGVLAVGYGTDGSKDYW 287

Query: 292 LIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           L+KNSWG +WG  G+I M R+      CGIA  ASYP+
Sbjct: 288 LVKNSWGASWGMSGYIEMVRNHNNK--CGIATSASYPV 323


>gi|359806985|ref|NP_001241331.1| uncharacterized protein LOC100811719 precursor [Glycine max]
 gi|255645733|gb|ACU23360.1| unknown [Glycine max]
          Length = 362

 Score =  230 bits (587), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 136/349 (38%), Positives = 196/349 (56%), Gaps = 28/349 (8%)

Query: 1   MLIIMVTWA---SLVMS-----RTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKK 52
             I++V++    SL MS     +   E+ +    + W  +  R Y NQ EKA RF+IF+ 
Sbjct: 12  FFIVLVSFTCSLSLAMSSNQLEQFASEEEVFQLFQAWQKEHKREYGNQEEKAKRFQIFQS 71

Query: 53  NFRFIEKFN---REGNQTYKLSLNEFADLTDEEFIASHTG-YKMPTRNISNQSQSYANNW 108
           N R+I + N   +     ++L LN+FAD++ EEF+ ++    +MP  N+ ++ +      
Sbjct: 72  NLRYINEMNAKRKSPTTQHRLGLNKFADMSPEEFMKTYLKEIEMPYSNLESRKKLQK--- 128

Query: 109 FGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQ 168
            G       LP S+DWR +GAVT V++QG C   W FS   A+EGI KI TG L+SLS Q
Sbjct: 129 -GDDADCDNLPHSVDWRDKGAVTEVRDQGKCQSHWAFSVTGAIEGINKIVTGNLVSLSVQ 187

Query: 169 QVLDCS-GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSY 227
           QV+DC   S GC GG+  +AF Y+I + G+  E  YPY  + G C  +  A K   I + 
Sbjct: 188 QVVDCDPASHGCAGGFYFNAFGYVIENGGIDTEAHYPYTAQNGTC--KANANKVVSIDNL 245

Query: 228 QDVPTSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAV---TIVGYG 283
             V   E AL   VS+QPVSV+IDA+  G ++Y+GGV+ G  C  N   A     IVGYG
Sbjct: 246 LVVVGPEEALLCRVSKQPVSVSIDAT--GLQFYAGGVYGGENCSKNSTKATLVCLIVGYG 303

Query: 284 SSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA---GLCGIARKASYPI 329
           S     YW++KNSWG++WGE G++ ++R+V      G+C I     +PI
Sbjct: 304 SVGGEDYWIVKNSWGKDWGEEGYLLIKRNVSDEWPYGVCAINAAPGFPI 352


>gi|29165304|gb|AAO65603.1| cathepsin L precursor [Hydra vulgaris]
          Length = 324

 Score =  230 bits (587), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 131/337 (38%), Positives = 196/337 (58%), Gaps = 26/337 (7%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L++ VT A  +      E  I      W     + Y +  E+ +R+ I+K N R I + 
Sbjct: 7   LLLLGVTLAYTIERPVKDESWIQ-----WKMYHNKVYSHDGEETVRYTIWKDNERRIREH 61

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N +G   + L +N+F D+T+ EF A   GY +  ++++  +    NN+          P 
Sbjct: 62  NLKGGD-FILKMNQFGDMTNSEFKA-FNGY-LSHKHVNGSTFLTPNNFVA--------PD 110

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSR 177
           ++DWR  G VTPVK+QG CG CW FS   ++EG    +TG+L+SLSEQ ++DCS   G+ 
Sbjct: 111 TVDWRNEGYVTPVKDQGQCGSCWAFSTTGSLEGQHFKKTGKLVSLSEQNLVDCSTAYGNN 170

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GG MD+AF+YI  ++G+  E  YPY   +G C +++ ++ AA    + D+P  +E  
Sbjct: 171 GCDGGLMDNAFTYIKENKGIDSEASYPYTAEDGKCVFKKSSV-AATDTGFVDIPEGNENK 229

Query: 237 LRYAV-SRQPVSVAIDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEGPYWLI 293
           L+ AV S  P+SVAIDAS   F++YS GV+  P      L+H V +VGYG+ +   YWL+
Sbjct: 230 LKEAVASVGPISVAIDASHESFQFYSSGVYNEPSCSSTELDHGVLVVGYGTESGKDYWLV 289

Query: 294 KNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           KNSW  +WG+ G+I+MRR+      CGIA KASYP+ 
Sbjct: 290 KNSWNTSWGDKGYIKMRRNA--KNQCGIATKASYPLV 324


>gi|54020916|ref|NP_001005702.1| cathepsin K (pycnodysostosis) precursor [Xenopus (Silurana)
           tropicalis]
 gi|49671274|gb|AAH75275.1| cathepsin K (pycnodysostosis) [Xenopus (Silurana) tropicalis]
          Length = 329

 Score =  230 bits (587), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 133/328 (40%), Positives = 194/328 (59%), Gaps = 19/328 (5%)

Query: 10  SLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQ 66
           SLV      E ++ +K ELW     R Y  Q ++  R +I++KN   I + N+E   G  
Sbjct: 12  SLVKIGLCQESNLDSKWELWKKTYHRQYNGQLDEIRRRQIWEKNLNLISQHNKEFSQGLH 71

Query: 67  TYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRA 126
           TY L++N   D+T EE +    G K+P  +  N +  Y   W    +SR  +P  ID+R 
Sbjct: 72  TYDLAMNHLGDMTSEEVVQKMMGLKVPPNHRPNNT--YIPEW----NSR--IPEYIDYRK 123

Query: 127 RGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMD 185
           +G VTPV NQG CG CW FS+V A+EG    +TG+L+SLS Q ++DC + + GC GG+M 
Sbjct: 124 KGYVTPVHNQGICGSCWAFSSVGALEGQLMKKTGKLVSLSPQNLVDCDTDNYGCEGGYMT 183

Query: 186 DAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ 244
           +AF Y+  + G+  +  YPY  ++  C++   A KAA  + Y+++P  SE AL+ AV+  
Sbjct: 184 NAFGYVRDNGGIDSDAEYPYVGQDEGCHYNP-ADKAATCKGYKEIPVGSEKALKRAVANV 242

Query: 245 -PVSVAIDASSPGFRYYSGGVFAGPCGNN--LNHAVTIVGYGSSNEGPYWLIKNSWGQNW 301
            PVSV+IDAS P F++Y  GV+     N   +NHAV +VGYG+     +W+IKNSWG  W
Sbjct: 243 GPVSVSIDASLPSFQFYKKGVYYDSSCNPDAVNHAVLVVGYGNEKGIKHWIIKNSWGDWW 302

Query: 302 GEGGFIRMRRDVGGAGLCGIARKASYPI 329
           G+ G++ + RD   A  CGIA  AS+P+
Sbjct: 303 GKKGYVLLARDKKNA--CGIASLASFPV 328


>gi|194352764|emb|CAQ00110.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
          Length = 406

 Score =  230 bits (587), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 135/346 (39%), Positives = 189/346 (54%), Gaps = 36/346 (10%)

Query: 18  HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQ---TYKLSLNE 74
           H+D +  +  +WM    R+Y    EKA RF++++ N RFIE  N E      TY+L    
Sbjct: 55  HQDLMMDRFHVWMTVHNRSYSTAGEKARRFEVYRSNMRFIEAVNAEAATSGLTYELGEGP 114

Query: 75  FADLTDEEFIASHTGYKMPTRNISNQS------QSYANNWFG---------YPDSRRGLP 119
           F DLT+EEF+  +TG  +      +         ++A +  G         Y +     P
Sbjct: 115 FTDLTNEEFMELYTGQILEDDQSEDGDDDEQIITTHAGSIDGLGTHKGATVYANFSASAP 174

Query: 120 RSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-GSRG 178
            SIDWR RG VTPVKNQ  CG CW F  VA +EGI KI+ G L+SLSEQQ++DC     G
Sbjct: 175 TSIDWRKRGVVTPVKNQKQCGSCWAFPTVATIEGIHKIKRGTLVSLSEQQLIDCDYLDNG 234

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELAL 237
           C GG +  AF +I ++ G+T    Y Y+   G C   R    AA+I  ++ V + SE++L
Sbjct: 235 CKGGLVTRAFQWIKKNGGITSTSSYKYKAVRGRC--LRNRKPAAKIVGFRKVKSNSEVSL 292

Query: 238 RYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNN-LNHAVTIVGYGSSNE--------- 287
             AV+ QPV+V+I + S  F +Y GG++ GPC    LNHAVT+VGYG   +         
Sbjct: 293 MNAVANQPVAVSISSHSSHFHHYKGGIYNGPCSTTKLNHAVTVVGYGQQQQNGADSVHAS 352

Query: 288 ---GPYWLIKNSWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYPI 329
                YW++KNSWG  WG+ G+I M+R     +G CGIA +  +P+
Sbjct: 353 APGAKYWIVKNSWGTTWGDKGYILMKRGTKHSSGQCGIATRPVFPL 398


>gi|254674508|dbj|BAH86062.1| cysteine protease [Haemaphysalis longicornis]
          Length = 333

 Score =  230 bits (587), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 129/323 (39%), Positives = 180/323 (55%), Gaps = 38/323 (11%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEF 83
           E + +Q  + Y +  E+ +RFKIF +N   + K N +   G  +YKL++N+F DL   EF
Sbjct: 28  EAFKSQHNKAYSSHVEELLRFKIFTENTLLVAKHNAKYAKGLVSYKLAMNKFGDLLPHEF 87

Query: 84  IASHTGYK-----------MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTP 132
                GY+           +P  N+++ S                LP ++DWR +GAVTP
Sbjct: 88  AKMVNGYRGKQNKEQRPTFIPPANLNDSS----------------LPTTVDWRKKGAVTP 131

Query: 133 VKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFS 189
           VKNQG CG CW FS   ++EG    +TG+L+SLSEQ ++DCS   G++GC GG MD+ F 
Sbjct: 132 VKNQGQCGSCWAFSTTGSLEGQHFRKTGKLVSLSEQNLVDCSDDFGNQGCNGGLMDNGFQ 191

Query: 190 YIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSR-QPVSV 248
           YI  + G+  E  +PY  ++G C +++  + A           SE  L+ AV+   PVSV
Sbjct: 192 YIKANGGIDTEESHPYTAQDGDCKFKKADVGATDAGFVDIQQGSEDDLKKAVATVGPVSV 251

Query: 249 AIDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGF 306
           AIDAS   F+ YS GV+  P    + L+H V  VGYG  N   YWL+KNSWG +WG+ G+
Sbjct: 252 AIDASHGSFQLYSQGVYDEPDCSSSQLDHGVLTVGYGVKNGKKYWLVKNSWGGDWGDNGY 311

Query: 307 IRMRRDVGGAGLCGIARKASYPI 329
           I M RD      CGIA  ASYP+
Sbjct: 312 ILMSRDKDNQ--CGIASSASYPL 332


>gi|125526836|gb|EAY74950.1| hypothetical protein OsI_02846 [Oryza sativa Indica Group]
          Length = 359

 Score =  230 bits (587), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 137/332 (41%), Positives = 187/332 (56%), Gaps = 31/332 (9%)

Query: 22  ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDE 81
           ++A+H  WMA+  RTY + AEKA RF++F+ N   I+  NR G+ TY L L  FADLT +
Sbjct: 34  MAARHRCWMARVGRTYADAAEKARRFEVFRANAERIDAANRAGDLTYTLGLTPFADLTAD 93

Query: 82  EFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR--------SIDWRARGAVTPV 133
           EF A H    MP  ++   + +          +++ LP         S DWR  GAVTPV
Sbjct: 94  EFRARHL---MPDADVDEPATARVLFEQEEKAAKQHLPPSRPPAVWGSKDWRDLGAVTPV 150

Query: 134 KNQ--GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-GSRGCYGGWMDDAFSY 190
           ++Q   +C  CW F+AVAA EG+ KI TG +  LS QQVLDC+ G   C GG + +A  Y
Sbjct: 151 QDQDKNNCNSCWAFAAVAATEGLIKIETGNVTPLSAQQVLDCTGGDNTCKGGHIHEALRY 210

Query: 191 IIRSQG----LTDERVYPYQRREGYC----NWQRGAMKAARIRSYQDV-PTSELALRYAV 241
           I  +       TD    PY   +G C         +  A  IR  Q V P  + ALR AV
Sbjct: 211 IATASAGGRLSTDTSYRPYDGEKGTCAAGSGSASSSSVAVVIRGVQKVTPHDKDALRAAV 270

Query: 242 SRQPVSVAIDASSPGFRYYSGG-VFAGP--CGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            RQPV+  +D+S P FR + GG V+ G   CG   NHAV +VGYG++++G PYWL+KNSW
Sbjct: 271 ERQPVAADMDSSDPEFRGFKGGRVYRGSAGCGKKRNHAVAVVGYGTASDGTPYWLLKNSW 330

Query: 298 GQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           G +WGE G++R+  D      CG++ + +YP 
Sbjct: 331 GTDWGENGYMRIAVDAD----CGVSSRPAYPF 358


>gi|334332718|ref|XP_001367502.2| PREDICTED: cathepsin L1-like [Monodelphis domestica]
          Length = 333

 Score =  230 bits (586), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 126/318 (39%), Positives = 188/318 (59%), Gaps = 20/318 (6%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFAD 77
           ++ ++   W AQ  ++Y+   E ++R   ++KN + IE+ N+E   G  +++L +N+F D
Sbjct: 24  ALDSQWHQWKAQHGKSYEAN-EDSLRRATWEKNLKMIERHNQEYSAGKHSFQLRMNKFGD 82

Query: 78  LTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQG 137
           ++ EEF     GYK      SN SQ               LP S+DWR +G VTPVK QG
Sbjct: 83  MSTEEFKQVMNGYK------SNGSQRRTKGSLYRESLLAQLPESVDWREKGYVTPVKEQG 136

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRS 194
            CG CW FSAV A+EG    +TG+L+SLS Q ++DC+   G+ GC GG+MD+AF Y+  +
Sbjct: 137 DCGACWSFSAVGAIEGQWFRKTGKLVSLSIQNLIDCTIPEGNNGCDGGFMDNAFQYVQDN 196

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVAIDA 252
            G+  E  YPY  ++  C + +     A I  + D+P+  E AL  AV+   P+SV ID+
Sbjct: 197 GGIDTEECYPYVAQDTECKY-KPECSGANITGFVDIPSMDERALMEAVATVGPISVGIDS 255

Query: 253 SSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMR 310
           ++P F++Y  GV+  P    + L+H V +VGYGS  +  YW++KNSWG+ WG+ G+I M 
Sbjct: 256 ANPSFKFYQSGVYYEPDCSSSQLDHGVLVVGYGSIGKDEYWIVKNSWGEAWGDNGYILMA 315

Query: 311 RDVGGAGLCGIARKASYP 328
           +D      CGIA +ASYP
Sbjct: 316 KDKDNH--CGIATEASYP 331


>gi|46576360|sp|P60994.1|ERVB_TABDI RecName: Full=Ervatamin-B; Short=ERV-B
 gi|30749291|pdb|1IWD|A Chain A, Proposed Amino Acid Sequence And The 1.63 Angstrom X-ray
           Crystal Structure Of A Plant Cysteine Protease Ervatamin
           B: Insight Into The Structural Basis Of Its Stability
           And Substrate Specificity
          Length = 215

 Score =  230 bits (586), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 113/214 (52%), Positives = 149/214 (69%), Gaps = 5/214 (2%)

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGS 176
           LP  +DWR++GAV  +KNQ  CG CW FSAVAAVE I KIRTG+LISLSEQ+++DC + S
Sbjct: 1   LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTAS 60

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSEL 235
            GC GGWM++AF YII + G+  ++ YPY   +G C   R  ++   I  +Q V   +E 
Sbjct: 61  HGCNGGWMNNAFQYIITNGGIDTQQNYPYSAVQGSCKPYR--LRVVSINGFQRVTRNNES 118

Query: 236 ALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKN 295
           AL+ AV+ QPVSV ++A+   F++YS G+F GPCG   NH V IVGYG+ +   YW+++N
Sbjct: 119 ALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTAQNHGVVIVGYGTQSGKNYWIVRN 178

Query: 296 SWGQNWGEGGFIRMRRDVG-GAGLCGIARKASYP 328
           SWGQNWG  G+I M R+V   AGLCGIA+  SYP
Sbjct: 179 SWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYP 212


>gi|195334204|ref|XP_002033774.1| GM21500 [Drosophila sechellia]
 gi|194125744|gb|EDW47787.1| GM21500 [Drosophila sechellia]
          Length = 341

 Score =  230 bits (586), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 127/308 (41%), Positives = 185/308 (60%), Gaps = 16/308 (5%)

Query: 35  RTYKNQAEKAMRFKIFKKNFRFIEKFNR---EGNQTYKLSLNEFADLTDEEFIASHTGYK 91
           + Y++  E+  R KIF +N   I K N+   EG  ++KL++N++ADL   EF     G+ 
Sbjct: 38  KNYQDDTEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFN 97

Query: 92  MPT-RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAA 150
               + +    +S+    F  P +   LP+S+DWR +GAVT VK+QG CG CW FS+  A
Sbjct: 98  YTLHKQLRAADESFKGVTFISP-AHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGA 156

Query: 151 VEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQR 207
           +EG    ++G L+SLSEQ ++DCS   G+ GC GG MD+AF YI  + G+  E+ YPY+ 
Sbjct: 157 LEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEA 216

Query: 208 REGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVF 265
            +  C++ +G + A   R + D+P   E  +  AV+   PV+VAIDAS   F++YS GV+
Sbjct: 217 IDDSCHFNKGTIGATD-RGFTDIPQGDEKKMAEAVATVGPVAVAIDASHESFQFYSEGVY 275

Query: 266 AGP-C-GNNLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIA 322
             P C   NL+H V +VG+G+   G  YWL+KNSWG  WG+ GFI+M R+      CGIA
Sbjct: 276 NEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRN--KENQCGIA 333

Query: 323 RKASYPIA 330
             +SYP+ 
Sbjct: 334 SASSYPLV 341


>gi|402770509|gb|AFQ98389.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  230 bits (586), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 125/322 (38%), Positives = 182/322 (56%), Gaps = 37/322 (11%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEF 83
           E +     +TY++  E+ +RFKIF ++   I + N +   G  +YKL +N+F DL   EF
Sbjct: 28  EAFKTTHKKTYQSHMEELLRFKIFTESSLIIARHNAKYAKGLVSYKLGMNQFGDLLAHEF 87

Query: 84  IASHTGYK----------MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPV 133
                G+           +P  N+++ S                LP+++DWR +GAVTPV
Sbjct: 88  ARIFNGHHGTRKTGGSTFLPPANVNDSS----------------LPKAVDWRKKGAVTPV 131

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSY 190
           K+QG CG CW FSA  ++EG   ++ G L+SLSEQ ++DCS   G+ GC GG M+DAF Y
Sbjct: 132 KDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKY 191

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQ-PVSVA 249
           I  + G+  E+ YPY+  +G C +++  + A      +    SE  L+ AV+   P+SVA
Sbjct: 192 IKANDGIDTEKSYPYEAVDGECRFKKEDVGATDTGYVEIKAGSEDDLKKAVATVGPISVA 251

Query: 250 IDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFI 307
           IDAS   F+ YS GV+  P     +L+H V +VGYG      YWL+KNSW ++WG+ G+I
Sbjct: 252 IDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYI 311

Query: 308 RMRRDVGGAGLCGIARKASYPI 329
            M RD      CGIA +ASYP+
Sbjct: 312 LMSRD--NNNQCGIASQASYPL 331


>gi|288548566|gb|ADC52431.1| cathepsin L2 cysteine protease [Pinctada fucata]
          Length = 330

 Score =  230 bits (586), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 129/311 (41%), Positives = 188/311 (60%), Gaps = 21/311 (6%)

Query: 28  LWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEFADLTDEEFI 84
           ++  Q  + Y+N+ E+A R  +++ N  FI   N     G  T+ + +NE+ D+T+EEF 
Sbjct: 29  IFKKQYNKLYQNE-EEARRRLVWESNLDFITLHNLAADRGEHTFWVGMNEYGDMTNEEFT 87

Query: 85  ASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWI 144
            +  GY+M  RN ++ +       F  P++   LP ++DWR +G VTP+KNQG CG CW 
Sbjct: 88  KTMNGYRM--RNKTSNAPV-----FMPPNNMGDLPDTVDWRPKGYVTPIKNQGQCGSCWS 140

Query: 145 FSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDER 201
           FSA  ++EG T  +TG+L+SLSEQ ++DCS   G+ GC GG MDDAF+YI  + G+  E 
Sbjct: 141 FSATGSLEGQTFKKTGKLVSLSEQNLVDCSKKQGNHGCEGGLMDDAFTYIKANNGIDTEA 200

Query: 202 VYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVAIDASSPGFRY 259
            YPY+ R+G C ++   + A     + D+ T  E AL+ AV+   P+SVAIDAS   F+ 
Sbjct: 201 SYPYKARDGKCEFKSADVGATDT-GFVDIKTKDEEALKQAVATVGPISVAIDASHMSFQL 259

Query: 260 YSGGVFAG--PCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAG 317
           Y  GV+         L+H V  VGYG+ +   YWL+KNSWG++WG+ G+I+M R+     
Sbjct: 260 YRTGVYHDWFCSQTKLDHGVLAVGYGTEDSKDYWLVKNSWGESWGQKGYIQMSRNRRNN- 318

Query: 318 LCGIARKASYP 328
            CGIA  ASYP
Sbjct: 319 -CGIATSASYP 328


>gi|348687948|gb|EGZ27762.1| papain-like cysteine protease C1 [Phytophthora sojae]
          Length = 533

 Score =  230 bits (586), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 128/313 (40%), Positives = 178/313 (56%), Gaps = 14/313 (4%)

Query: 25  KHEL--WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQT-YKLSLNEFADLTDE 81
           +HE   WM+    T+ +  E A R + +  N  +I + N E   T  KL  N F+ ++ +
Sbjct: 25  EHEFSAWMSAHGVTFSDALEFARRLENYIANDMYILEHNAENAWTGVKLGHNAFSHMSFD 84

Query: 82  EFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGC 141
           EF    TG  +P   +  +  S  +  +    S   +P ++DW  +G VTPVKNQG CG 
Sbjct: 85  EFKFKMTGLVLPEGYLEQRLASRVDGLW----SDVEVPSAVDWVDKGGVTPVKNQGMCGS 140

Query: 142 CWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRGCYGGWMDDAFSYIIRSQGLTD 199
           CW FS   AVEG T + +G+L+SLSEQ+++DC  +G  GC GG MD AF +I    G+  
Sbjct: 141 CWAFSTTGAVEGATFVSSGKLLSLSEQELVDCDHNGDMGCNGGLMDHAFQWIEDHGGICS 200

Query: 200 ERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGFR 258
           E  Y Y+ +   C   R      ++  +QDV P  E AL+ AV++QPVSVAI+A    F+
Sbjct: 201 EDDYEYKAKAQVC---RKCDSVVKVTGFQDVNPQDEHALKVAVAQQPVSVAIEADQKAFQ 257

Query: 259 YYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AG 317
           +Y  GVF   CG  L+H V  VGYG+ N   +W +KNSWG +WGE G+IR+ R+  G AG
Sbjct: 258 FYKSGVFNLTCGTRLDHGVLAVGYGNDNGQKFWKVKNSWGASWGEQGYIRLAREENGPAG 317

Query: 318 LCGIARKASYPIA 330
            CGIA   SYP A
Sbjct: 318 QCGIASVPSYPFA 330


>gi|219362839|ref|NP_001136636.1| uncharacterized protein LOC100216764 precursor [Zea mays]
 gi|194696462|gb|ACF82315.1| unknown [Zea mays]
 gi|413934556|gb|AFW69107.1| hypothetical protein ZEAMMB73_554980 [Zea mays]
          Length = 361

 Score =  230 bits (586), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 147/348 (42%), Positives = 206/348 (59%), Gaps = 25/348 (7%)

Query: 1   MLIIMVTWASLVMSRTLH----EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRF 56
           ++ +  T A+  +  T H    E+S+ A +E W A      ++  EK  RF +FK+N   
Sbjct: 18  VIALSTTPAASAIDYTEHDLASEESLWALYERWCAHY-NMARDLGEKTRRFNLFKENAHR 76

Query: 57  IEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKM--PTRNISN----QSQSYANNWF- 109
           I + N +GN TY L LN F+D+TDEEF  S  G  +  P + IS+    + Q + +  F 
Sbjct: 77  IYEHN-QGNATYTLGLNRFSDMTDEEFSRSPYGRCLFAPVQRISDGENEELQQHEDVSFN 135

Query: 110 ---GYPDSRRGLPRSIDWRARGAVTPVKNQG-SCGCCWIFSAVAAVEGITKIRTGRLISL 165
              G   +  GLP S+DWR R +VT VK+QG +CG CW F+A+AAVEGI  IRT  L++L
Sbjct: 136 LTHGGATAALGLPPSVDWRGR-SVTRVKDQGLTCGSCWAFAAIAAVEGINAIRTWSLVTL 194

Query: 166 SEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAM-KAAR 223
           SEQQ++DC     GC GGW+  A  +I+R++G+  E  YPY   +G C   R  M     
Sbjct: 195 SEQQLVDCDNVDHGCAGGWIPSALDFIVRNRGIVPEGTYPYIGTQGRC---RHVMAPPVT 251

Query: 224 IRSYQDV-PTSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGY 282
           I  Y+ V P    AL  AV+ QPV+VA+++S+  FR+Y GGVF G CG  L HA  +VGY
Sbjct: 252 IDGYRRVLPFDVNALMSAVAAQPVAVAMESSAWAFRHYQGGVFNGNCGGRLGHAAAVVGY 311

Query: 283 GSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPI 329
           G    GP+W++KNSWG  WGEGG++R+ R+     G+CGI  +  YP+
Sbjct: 312 GDGAGGPFWIVKNSWGPKWGEGGYVRISRNAPNRLGICGILTQPLYPV 359


>gi|30023547|gb|AAO48766.2| cathepsin L-like cysteine proteinase [Tenebrio molitor]
          Length = 337

 Score =  229 bits (585), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 125/307 (40%), Positives = 189/307 (61%), Gaps = 16/307 (5%)

Query: 35  RTYKNQAEKAMRFKIFKKNFRFIEKFNR---EGNQTYKLSLNEFADLTDEEFIASHTGYK 91
           + Y+++ E+  R KIF +N   + K N+   +G  ++KL +N++AD+   EF+    G+ 
Sbjct: 36  KQYQSETEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADMLHHEFVQVLNGFN 95

Query: 92  MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAV 151
                + +     +  +   P +   LP  IDWR +GAVTPVK+QG CG CW FSA  ++
Sbjct: 96  RTKSGLRSGESDDSVTFL--PPANVQLPGQIDWRDKGAVTPVKDQGQCGSCWSFSATGSL 153

Query: 152 EGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRR 208
           EG    ++G+L+SLSEQ ++DCS   G+ GC GG MD+AF YI  + G+  E+ YPY+  
Sbjct: 154 EGQHFRQSGKLVSLSEQNLVDCSEKFGNNGCNGGLMDNAFRYIKANGGIDTEQAYPYKAE 213

Query: 209 EGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR-QPVSVAIDASSPGFRYYSGGVFA 266
           +  C++ +   K A  R Y D+ + +E  L+ AV+   PVSVAIDAS   F+ YSGGV+ 
Sbjct: 214 DEKCHY-KPKNKGATDRGYVDIESGNEDKLQSAVATVGPVSVAIDASHQSFQLYSGGVYY 272

Query: 267 GP--CGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIAR 323
            P    + L+H V +VGYG+ ++G  YWL+KNSWG++WG+ G+I+M R+      CGIA 
Sbjct: 273 EPDCSASQLDHGVLVVGYGTEDDGTDYWLVKNSWGKSWGDQGYIKMARNRNNN--CGIAT 330

Query: 324 KASYPIA 330
           +ASYP+ 
Sbjct: 331 EASYPLV 337


>gi|432910512|ref|XP_004078392.1| PREDICTED: cathepsin K-like [Oryzias latipes]
          Length = 331

 Score =  229 bits (585), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 134/335 (40%), Positives = 194/335 (57%), Gaps = 20/335 (5%)

Query: 4   IMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE 63
           +++  ++ VMS+ + E ++ A  E W     + Y    E+ +R  I++KN R IE  N+E
Sbjct: 7   VLLLLSASVMSQ-MDETTLDAHWEEWKMTHTKEYITVEEEGIRRAIWEKNLRMIEAHNQE 65

Query: 64  ---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
              G  TY L +N+F D+T EE +   TG +MP     N          G   S   LP+
Sbjct: 66  AALGMHTYTLGMNQFGDMTQEEVVERMTGLQMPL----NPEPRVPMETDG---SLIKLPK 118

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGC 179
           S+D+R +G VT VKNQGSCG CW FS+V A+EG    +TG L+ LS Q ++DC + + GC
Sbjct: 119 SVDYRKKGMVTSVKNQGSCGSCWAFSSVGALEGQLAKKTGNLVDLSPQNLVDCVTENDGC 178

Query: 180 YGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALR 238
            GG+M +AF Y+  + G+  E  YPY   +  C +    + AA+I+ Y++VP   E AL 
Sbjct: 179 GGGYMTNAFKYVQENGGIDSEAAYPYMGEDQPCRYNVSGL-AAQIKGYKEVPEGDEHALA 237

Query: 239 YAVSRQ-PVSVAIDASSPGFRYYSGGV-FAGPCG-NNLNHAVTIVGYGSSNEG-PYWLIK 294
            A+ +  PVSV IDAS   F YY  G+ F   C   ++NHAV  VGYG + +G  +W++K
Sbjct: 238 VALFKAGPVSVGIDASQNSFLYYQKGIYFDRNCNKEDINHAVLAVGYGVNAKGKKFWIVK 297

Query: 295 NSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           NSWG+ WG  G++ M R+ G   +CGIA  ASYP+
Sbjct: 298 NSWGETWGNKGYVLMARNRG--NVCGIANLASYPV 330


>gi|221090861|ref|XP_002167224.1| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 324

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/337 (38%), Positives = 196/337 (58%), Gaps = 26/337 (7%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L++ VT A  +      E  I      W     + Y +  E+ +R+ I+K N R I + 
Sbjct: 7   LLLLGVTLAYTIERPVKDESWIQ-----WKMYHNKVYSHDGEETVRYTIWKDNERRIREH 61

Query: 61  NREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
           N +G   + L +N+F D+T+ EF A   GY +  ++++  +    NN+          P 
Sbjct: 62  NLKGGD-FLLKMNQFGDMTNSEFKA-FNGY-LSHKHVNGSTFLTPNNFVA--------PD 110

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSR 177
           ++DWR  G VTPVK+QG CG CW FS   ++EG    +TG+L+SLSEQ ++DCS   G+ 
Sbjct: 111 TVDWRNEGYVTPVKDQGQCGSCWAFSTTGSLEGQHFKKTGKLVSLSEQNLVDCSTAYGNN 170

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GG MD+AF+YI  ++G+  E  YPY   +G C +++ ++ AA    + D+P  +E  
Sbjct: 171 GCNGGLMDNAFTYIKENKGIDSEASYPYTAEDGKCVFKKPSV-AATDTGFVDLPEGNENK 229

Query: 237 LRYAV-SRQPVSVAIDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEGPYWLI 293
           L+ AV S  P+SVAIDAS   F++YS GV+  P      L+H V +VGYG+ +   YWL+
Sbjct: 230 LKEAVASVGPISVAIDASHESFQFYSSGVYNEPSCSSTELDHGVLVVGYGTESGKDYWLV 289

Query: 294 KNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           KNSW  +WG+ G+I+MRR+      CGIA KASYP+ 
Sbjct: 290 KNSWNTSWGDKGYIKMRRNA--KNQCGIATKASYPLV 324


>gi|74200292|dbj|BAE22939.1| unnamed protein product [Mus musculus]
          Length = 308

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 129/315 (40%), Positives = 178/315 (56%), Gaps = 26/315 (8%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIA 85
           W +   R Y    E+  R  I++KN R I+  N E   G   + + +N F D+T+EEF  
Sbjct: 6   WKSTHRRLYGTNEEEWRR-AIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQ 64

Query: 86  SHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIF 145
              GY+          +      F  P   + +P+S+DWR +G VTPVKNQG CG CW F
Sbjct: 65  VVNGYR--------HQKHKKGRLFQEPLMLK-IPKSVDWREKGCVTPVKNQGQCGSCWAF 115

Query: 146 SAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERV 202
           SA   +EG   ++TG+LISLSEQ ++DCS   G++GC GG MD AF YI  + GL  E  
Sbjct: 116 SASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIKENGGLDSEES 175

Query: 203 YPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSR-QPVSVAIDASSPGFRYYS 261
           YPY+ ++G C + R     A    + D+P  E AL  AV+   P+SVA+DAS P  ++YS
Sbjct: 176 YPYEAKDGSCKY-RAEFAVANDTGFVDIPQQEKALMKAVATVGPISVAMDASHPSLQFYS 234

Query: 262 GGVFAGP--CGNNLNHAVTIVGYG----SSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG 315
            G++  P     NL+H V +VGYG     SN+  YWL+KNSWG  WG  G+I++ +D   
Sbjct: 235 SGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEGYIKIAKDRDN 294

Query: 316 AGLCGIARKASYPIA 330
              CG+A  ASYP+ 
Sbjct: 295 H--CGLATAASYPVV 307


>gi|115438534|ref|NP_001043563.1| Os01g0613800 [Oryza sativa Japonica Group]
 gi|11034574|dbj|BAB17098.1| cysteine proteinase-like [Oryza sativa Japonica Group]
 gi|113533094|dbj|BAF05477.1| Os01g0613800 [Oryza sativa Japonica Group]
 gi|125571165|gb|EAZ12680.1| hypothetical protein OsJ_02595 [Oryza sativa Japonica Group]
 gi|215766821|dbj|BAG99049.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 359

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 136/332 (40%), Positives = 187/332 (56%), Gaps = 31/332 (9%)

Query: 22  ISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDE 81
           ++A+H  WMA+  RTY + AEKA RF++F+ N   I+  NR G+ TY L L  FADLT +
Sbjct: 34  MAARHRCWMARVGRTYADAAEKARRFEVFRANAERIDAANRAGDLTYTLGLTPFADLTAD 93

Query: 82  EFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR--------SIDWRARGAVTPV 133
           EF A H    MP  ++   + +          +++ LP         S DWR  GAVTPV
Sbjct: 94  EFRARHL---MPDADVDEPATARVLFEQEEKAAKQHLPPSRPPAVWGSKDWRDLGAVTPV 150

Query: 134 KNQG--SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-GSRGCYGGWMDDAFSY 190
           ++QG  +C  CW F+ VAA EG+ KI TG +  LS QQVLDC+ G   C GG + +A  Y
Sbjct: 151 QDQGKNNCNSCWAFAVVAATEGLIKIETGNVTPLSAQQVLDCTGGDNTCKGGHIHEALRY 210

Query: 191 IIRSQG----LTDERVYPYQRREGYC----NWQRGAMKAARIRSYQDV-PTSELALRYAV 241
           I  +       TD+   PY   +G C         +  A  IR  Q V P  + ALR AV
Sbjct: 211 IATASAGGRLSTDKSYRPYDGEKGTCAAGSGSASSSSVAVVIRGVQKVTPHDKDALRAAV 270

Query: 242 SRQPVSVAIDASSPGFRYYSGG-VFAGP--CGNNLNHAVTIVGYGSSNEG-PYWLIKNSW 297
            RQPV+  +D+S P FR + GG V+ G   CG   NHAV +VGYG++++G PYWL+KNSW
Sbjct: 271 ERQPVAADMDSSDPEFRGFKGGRVYRGSAGCGKKRNHAVAVVGYGTASDGTPYWLLKNSW 330

Query: 298 GQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
             +WGE G++R+  D      CG++ + +YP 
Sbjct: 331 ATDWGENGYMRIAVDAD----CGVSSRPAYPF 358


>gi|225719058|gb|ACO15375.1| Cathepsin L1 precursor [Caligus clemensi]
          Length = 326

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 129/313 (41%), Positives = 184/313 (58%), Gaps = 25/313 (7%)

Query: 29  WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEFADLTDEEFIA 85
           W A   + Y +  E+++RFKIF++N   I + N   R+G  TY L +N F DL   EF+ 
Sbjct: 26  WKATHGKVYNSADEESLRFKIFQENSLMITQHNEEYRQGFHTYILGMNHFGDLLHSEFLE 85

Query: 86  SHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIF 145
              G+         Q      + F + D+   +P   +W A+GAVTPVK+QG CG CW F
Sbjct: 86  RSNGF---------QGGVSGGDVFTF-DTNAPVPSYANWTAKGAVTPVKDQGKCGSCWAF 135

Query: 146 SAVAAVEGITKIRTGRLISLSEQQVLDCSGSR---GCYGGWMDDAFSYIIRSQGLTDERV 202
           SA  +VEG   ++  +L+SLSEQQ++DCSG     GC GG MD+AF Y I ++G+ +E+ 
Sbjct: 136 SATGSVEGQIFLKKKKLMSLSEQQLVDCSGDEGNLGCGGGLMDNAFKYFIANKGIANEKS 195

Query: 203 YPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQ-PVSVAIDASSPGFRYY 260
           YPY  ++  C +++ +M  A I S++DV    E  L+ AV+   PVSVAIDASS  F++Y
Sbjct: 196 YPYTAKDNDCKYKK-SMSVATISSFKDVKHKDEDQLKMAVANVGPVSVAIDASSSKFQFY 254

Query: 261 SGGVFAGP-CGNN-LNHAVTIVGYGSSNEG--PYWLIKNSWGQNWGEGGFIRMRRDVGGA 316
             GV+    C +  L+H V  VGYG+  +    +WL+KNSW  +WG  G+I+M R+    
Sbjct: 255 ESGVYYDENCSSEVLDHGVLAVGYGTDKKSGMDFWLVKNSWAASWGLNGYIKMARNKDNN 314

Query: 317 GLCGIARKASYPI 329
             CGIA  ASYPI
Sbjct: 315 --CGIATMASYPI 325


>gi|356545112|ref|XP_003540989.1| PREDICTED: LOW QUALITY PROTEIN: KDEL-tailed cysteine endopeptidase
           CEP1-like [Glycine max]
          Length = 400

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 122/305 (40%), Positives = 180/305 (59%), Gaps = 9/305 (2%)

Query: 3   IIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNR 62
           ++ VT      S++  E   S +HE WMAQ  + Y++ AE   RF+IFK N +FIE FN 
Sbjct: 92  LVGVTCGRQCRSKSRLEACTSERHEKWMAQYGKVYEDAAEMEKRFQIFKNNVQFIESFNV 151

Query: 63  EGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSI 122
            G++ + + +N+F DL DEEF A     +   R +S    +     F Y      +P ++
Sbjct: 152 AGDKPFNIRINQFPDLHDEEFKALLINGQ---RKVSGVETATEETSFRYGSVVTNIPATM 208

Query: 123 DWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC--SGSRGCY 180
           D R +G VTP+K+QG  G CW  SAVAA+EGI +I T +L+ LS+Q+++D     S GC 
Sbjct: 209 DGRKKGVVTPIKDQGIIGSCWALSAVAAIEGIHQITTSKLMFLSKQKLVDSVKGESEGCI 268

Query: 181 GGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRY 239
           GG+++DAF +I++  G+  E  YPY +    C  ++     A I+ Y+ VP+ ++ AL  
Sbjct: 269 GGYVEDAFEFIVKKGGILSETHYPY-KGVNXCKVEKETHSVAHIKGYEKVPSNNKKALLK 327

Query: 240 AVSRQPVSVAIDASSPGFRYYSGGVF-AGPCGNNLNHAVTIVGYGSSNEGP-YWLIKNSW 297
            V+ QPVSV ID  +  F+YYS  +F A  CG++ NH V +VGYG + +G  YW +KNSW
Sbjct: 328 VVANQPVSVYIDVGAHAFKYYSSEIFNARNCGSDPNHVVAVVGYGKALDGAKYWPVKNSW 387

Query: 298 GQNWG 302
           G  WG
Sbjct: 388 GTEWG 392


>gi|442539990|gb|AGC54590.1| bromelain, partial [Ananas comosus]
          Length = 241

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 114/214 (53%), Positives = 148/214 (69%), Gaps = 5/214 (2%)

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR 177
           +P+SIDWR  GAV  VKNQ  CG CW F+A+A VEGI KI+TG L+SLSEQ+VLDC+ S 
Sbjct: 13  VPQSIDWRDYGAVNEVKNQNPCGSCWAFAAIATVEGIYKIKTGYLVSLSEQEVLDCAVSY 72

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV-PTSELA 236
           GC GGW++ A+ +II + G+T E  YPYQ  +G CN       +A I  Y  V    E +
Sbjct: 73  GCKGGWVNKAYDFIISNNGVTTEENYPYQAYQGTCN-ANSFPNSAYITGYSYVRRNDERS 131

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGP-YWLIKN 295
           + YAVS QP++  IDAS   F+YY+GGVF+GPCG +LNHA+TI+GYG  + G  YW++ N
Sbjct: 132 MMYAVSNQPIAALIDASE-NFQYYNGGVFSGPCGTSLNHAITIIGYGQDSSGTKYWIVGN 190

Query: 296 SWGQNWGEGGFIRMRRDV-GGAGLCGIARKASYP 328
           SWG +WGEGG++RM R V   +G CGIA    +P
Sbjct: 191 SWGSSWGEGGYVRMARGVSSSSGACGIAMSPLFP 224


>gi|226821419|gb|ACO82385.1| cathepsin K [Lutjanus argentimaculatus]
          Length = 330

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 129/320 (40%), Positives = 188/320 (58%), Gaps = 19/320 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEF 75
           E  + A+ E W     + Y    E+ +R  +++KN R IE  N+E   G  +Y++++N  
Sbjct: 20  EAFLDAQWEQWRTTHRKEYNGLDEEGIRRAVWEKNMRMIEAHNQEAALGMHSYEMAMNHL 79

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
            D+T EE     TG  +P     N  +S+        D    LP+ ID+R +G VT VKN
Sbjct: 80  GDMTSEEVSEKMTGLLVPL----NHKRSFT---MALDDDVNRLPKYIDYRKKGMVTSVKN 132

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDAFSYIIRS 194
           QGSCG CW FS+  A+EG    +TG+L+ LS Q ++DC + + GC GG+M  AF Y+  +
Sbjct: 133 QGSCGSCWAFSSAGALEGQLAKKTGQLVDLSPQNLVDCVTENDGCGGGYMTKAFQYVADN 192

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVAIDA 252
            G+  E  YPY   +  C +    M AA+ + Y+++P  +E AL  A+ +  PVSV IDA
Sbjct: 193 GGIDSEEAYPYIGEDQPCRYNATGM-AAQCKGYKEIPEGNEHALAVALFKAGPVSVGIDA 251

Query: 253 SSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRM 309
           +   F++YS GV+  P  N  ++NHAV  VGYG + +G  YW++KNSWG++WG+GG+I M
Sbjct: 252 TLSSFQFYSKGVYYDPSCNKEDINHAVLAVGYGVTGKGKKYWIVKNSWGESWGKGGYILM 311

Query: 310 RRDVGGAGLCGIARKASYPI 329
            R+ G   LCGIA  ASYPI
Sbjct: 312 ARNRG--NLCGIANLASYPI 329


>gi|121543825|gb|ABM55577.1| putative cathepsin L-like protease [Maconellicoccus hirsutus]
          Length = 341

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 129/342 (37%), Positives = 190/342 (55%), Gaps = 18/342 (5%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
            L  ++ + S  ++     D I+ + EL+  Q ++ Y  + E+  R K+F  N   I + 
Sbjct: 6   FLCCVLIYHSNSVTAVSFNDLIAEEWELFKTQFSKAYNTEIEEKFRMKVFMDNKHKIARH 65

Query: 61  NR---EGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N+    G  +Y+L +N F DL   EF+ +  GY+   R ++       ++    P     
Sbjct: 66  NKLFQNGEVSYELEMNHFGDLLHHEFVKTVNGYRHSLRRVTGDE---IDSVTFIPAYNVT 122

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           +P S+DWR  GAVT VKNQG CG CW FS   ++EG     T +L SLSEQ ++DCS   
Sbjct: 123 VPDSVDWRTEGAVTEVKNQGQCGSCWAFSTTGSLEGQHFRNTKQLTSLSEQNLIDCSGKY 182

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-S 233
           G+ GC GG MD+AF+YI  ++G+  E+ YPY+  +  C + +     A  + + D+P   
Sbjct: 183 GNNGCSGGLMDNAFAYIKSNKGIDTEQSYPYEGIDDKCRY-KPQESGATDKGFVDIPQGD 241

Query: 234 ELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGN---NLNHAVTIVGYGSSNEG 288
           E  L+ AV+   P+SVAIDAS   F++Y  GV+    CGN   +L+H V  VGYG+ N  
Sbjct: 242 EEKLKLAVATVGPISVAIDASHQSFQFYKKGVYYDKGCGNGEEDLDHGVLAVGYGTENGK 301

Query: 289 PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
            YWL+KNSWG+ WG  G+I+M R+      CGIA  ASYP+ 
Sbjct: 302 DYWLVKNSWGKRWGLDGYIKMARN--KHNHCGIATSASYPLV 341


>gi|118140100|gb|ABK63481.1| cathepsin S [Channa argus]
          Length = 335

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/342 (38%), Positives = 191/342 (55%), Gaps = 32/342 (9%)

Query: 5   MVTWASLVMSR-----TLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           ++ W+ L++S         + S++   ++W     + Y+N+ E A R ++++KN +FI  
Sbjct: 8   LMFWSLLLVSLWDGAPATFDSSLNLHWQMWKKTHNKMYQNEVEDAHRRELWEKNLKFISM 67

Query: 60  FNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRR 116
            N E   G  TY+L +N+  DLT EE + ++   + PT            +    P +R+
Sbjct: 68  HNLEASMGIHTYELGMNQMGDLTQEEILKTYATLRPPT------------DVHRTPFTRK 115

Query: 117 ---GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC 173
                P ++DWR  G VT VKNQGSCG CW FSAV A+EG     TG+L+ LS Q ++DC
Sbjct: 116 SGVAAPGAMDWRDLGCVTSVKNQGSCGSCWAFSAVGALEGQLAKTTGKLVDLSPQNLVDC 175

Query: 174 S---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDV 230
           S   G+ GC GG+M +AF Y+I +QG+  E  YPY   E  C++      AA    Y  +
Sbjct: 176 SGKYGNHGCDGGFMTNAFQYVIENQGIESEASYPYIGLEQQCHYNP-EESAANCSQYHFL 234

Query: 231 P-TSELALRYAVSR-QPVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNE 287
           P   E AL+ A++   P+SVAIDAS P F +YS GV+  P C   +NH V  VGYG+ + 
Sbjct: 235 PEKDEEALKEAIATIGPISVAIDASKPTFTFYSSGVYDDPTCSEVINHGVLAVGYGTQST 294

Query: 288 GPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
              WL+KNSWG  +G+ G+IRM R+ G    CGIA    YP+
Sbjct: 295 QDSWLVKNSWGTYFGDSGYIRMSRNKGNQ--CGIALYGCYPL 334


>gi|170041165|ref|XP_001848344.1| cathepsin l [Culex quinquefasciatus]
 gi|167864709|gb|EDS28092.1| cathepsin l [Culex quinquefasciatus]
          Length = 340

 Score =  229 bits (584), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 130/319 (40%), Positives = 190/319 (59%), Gaps = 18/319 (5%)

Query: 27  ELWMA---QSARTYKNQAEKAMRFKIFKKNFRFIEKFNR---EGNQTYKLSLNEFADLTD 80
           E W A   Q  + Y ++ E+ +R KI+ +N   I K N+   +G + ++L +N++ DL  
Sbjct: 25  EEWNAYKLQHRKKYDSETEERLRLKIYVQNKHKIAKHNQRFEQGQEKFRLRVNKYTDLLH 84

Query: 81  EEFIASHTGYKMPTRNISNQSQSYANNWFGYPD-SRRGLPRSIDWRARGAVTPVKNQGSC 139
           EEF+ +  G+               +    Y + +   +P+++DWR +GAVTPVK+QG C
Sbjct: 85  EEFVQTLNGFNRTNAKKPMLKGVKIDEPVTYIEPANVEVPKTVDWREKGAVTPVKDQGHC 144

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQG 196
           G CW FSA  A+EG    +TG+L+SLSEQ ++DCS   G+ GC GG MD AF YI  + G
Sbjct: 145 GSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSTKYGNNGCNGGMMDFAFQYIKDNGG 204

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVAIDASS 254
           +  E+ YPY+  +  C++   A+ A   + + D+P   E AL  A++   PVSVAIDAS 
Sbjct: 205 IDTEKAYPYEAIDDTCHYNPKAVGATD-KGFVDIPQGDEKALMKAIATAGPVSVAIDASH 263

Query: 255 PGFRYYSGGVFAGP-CGN-NLNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRR 311
             F++YS GV+  P C + NL+H V  VGYG+S EG  YWL+KNSWG  WG+ G+++M R
Sbjct: 264 ESFQFYSEGVYYEPQCDSENLDHGVLAVGYGTSEEGEDYWLVKNSWGTTWGDQGYVKMAR 323

Query: 312 DVGGAGLCGIARKASYPIA 330
           +      CGIA  ASYP+ 
Sbjct: 324 NRDNH--CGIATAASYPLV 340


>gi|33112583|gb|AAP94047.1| cathepsin-L-like cysteine peptidase 03 [Tenebrio molitor]
          Length = 337

 Score =  229 bits (584), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 125/307 (40%), Positives = 188/307 (61%), Gaps = 16/307 (5%)

Query: 35  RTYKNQAEKAMRFKIFKKNFRFIEKFNR---EGNQTYKLSLNEFADLTDEEFIASHTGYK 91
           + Y++  E+  R KIF +N   + K N+   +G  ++KL +N++AD+   EF+    G+ 
Sbjct: 36  KQYQSDTEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADMLHHEFVQVLNGFN 95

Query: 92  MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAV 151
                + +     +  +   P +   LP  IDWR +GAVTPVK+QG CG CW FSA  ++
Sbjct: 96  RTKSGLRSGESDDSVTFL--PPANVQLPGQIDWRDKGAVTPVKDQGQCGSCWSFSATGSL 153

Query: 152 EGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRR 208
           EG    ++G+L+SLSEQ ++DCS   G+ GC GG MD+AF YI  + G+  E+ YPY+  
Sbjct: 154 EGQHFRKSGKLVSLSEQNLVDCSEKFGNNGCNGGLMDNAFRYIKANGGIDTEQAYPYKAE 213

Query: 209 EGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR-QPVSVAIDASSPGFRYYSGGVFA 266
           +  C++ +   K A  R Y D+ + +E  L+ AV+   PVSVAIDAS   F+ YSGGV+ 
Sbjct: 214 DEKCHY-KPKNKGATDRGYVDIESGNEDKLQSAVATVGPVSVAIDASHQSFQLYSGGVYY 272

Query: 267 GP--CGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIAR 323
            P    + L+H V +VGYG+ ++G  YWL+KNSWG++WG+ G+I+M R+      CGIA 
Sbjct: 273 EPDCSASQLDHGVLVVGYGTEDDGTDYWLVKNSWGKSWGDQGYIKMARNRDNN--CGIAT 330

Query: 324 KASYPIA 330
           +ASYP+ 
Sbjct: 331 EASYPLV 337


>gi|530736|emb|CAA56915.1| cathepsin l [Nephrops norvegicus]
 gi|1582621|prf||2119193B cathepsin L-related Cys protease
          Length = 313

 Score =  229 bits (584), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 125/312 (40%), Positives = 182/312 (58%), Gaps = 21/312 (6%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEF 83
           E +  Q  R Y +  E+  R ++F++N + +E FN++   G  T+K+++N+F D+T+EEF
Sbjct: 13  EHFKTQYGRKYGDAKEELYRQRVFQQNEQLVEAFNKKFENGEVTFKVAMNQFGDMTNEEF 72

Query: 84  IASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCW 143
            A   GYK  +R               +    R +   +DWR +GAVTPVK+QG CG CW
Sbjct: 73  NAVMKGYKKGSRGEPTTV---------FTAEGRPMAADVDWRTKGAVTPVKDQGQCGSCW 123

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDE 200
            FSA  ++EG   ++   L+SLSEQ+++DCS   G+ GC GGWM  AF YI  + G+  E
Sbjct: 124 AFSATGSLEGQHFLKNNELVSLSEQELVDCSTEYGNDGCGGGWMTSAFDYIKDNGGIDTE 183

Query: 201 RVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSR-QPVSVAIDASSPGFRY 259
             YPY+ ++  C +   ++  A    + +V  +E AL  AVS   P+SVAIDAS   F++
Sbjct: 184 SSYPYEAQDRSCRFDANSI-GATCTGFVEVQHTEEALHEAVSDIGPISVAIDASHFSFQF 242

Query: 260 YSGGV-FAGPCG-NNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAG 317
           YS GV +   C   NL+H V  VGYG+ +   YWL+KNSWG  WG+ G+I+M R+     
Sbjct: 243 YSSGVYYEKKCSPTNLDHGVLAVGYGTESTEDYWLVKNSWGSGWGDAGYIKMSRNRDNN- 301

Query: 318 LCGIARKASYPI 329
            CGIA + SYP 
Sbjct: 302 -CGIASEPSYPT 312


>gi|149617838|ref|XP_001521715.1| PREDICTED: cathepsin L1-like [Ornithorhynchus anatinus]
          Length = 338

 Score =  229 bits (584), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/345 (40%), Positives = 201/345 (58%), Gaps = 26/345 (7%)

Query: 1   MLIIMVTWA-SLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           +L+ +V+    L +S  L +  +    +LW     ++Y ++AE+  R  ++++N + I+ 
Sbjct: 3   LLVCLVSLCWGLAVSAPLGDSELDRHWKLWKNWHQKSY-HEAEEGWRRTVWEENLKAIQL 61

Query: 60  FNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTR-NISNQSQSYANNWFGYPDSR 115
            N E   G  TY+L +N+F DLT+EEF    TG +  ++ N  N S     N+       
Sbjct: 62  HNLEQSLGLHTYRLGMNQFGDLTNEEFQEILTGERHFSKGNRINGSAFLEANFVQ----- 116

Query: 116 RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS- 174
             +P S+DWR  G VTPVKNQG CG CW FS   A+EG    ++GRLISLSEQ ++DCS 
Sbjct: 117 --VPTSVDWRDHGYVTPVKNQGHCGSCWAFSTTGALEGQLFRKSGRLISLSEQNLVDCSW 174

Query: 175 --GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT 232
             G++GC+GG +D AF YI+++QG+  E  YPY  ++      +     A +  + D+P 
Sbjct: 175 QQGNQGCHGGIVDLAFQYILQNQGIDSEDCYPYTAKDTAQCTFKPECATAPVTGFVDIPP 234

Query: 233 -SELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEG 288
            SE AL  AV+   PVSV IDASS  FR+Y  G+F  P     +L+HAV +VGYG   E 
Sbjct: 235 HSEEALMKAVATVGPVSVGIDASSTSFRFYQSGIFYDPKCSSESLDHAVLVVGYGYERED 294

Query: 289 P----YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
                YW++KNSWG++WG+ G++ M +D G    CGIA  ASYP+
Sbjct: 295 EAGKKYWIVKNSWGKHWGDRGYVYMSKDRGNH--CGIATVASYPL 337


>gi|226821425|gb|ACO82388.1| cathepsin S [Lutjanus argentimaculatus]
          Length = 337

 Score =  229 bits (584), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 130/322 (40%), Positives = 182/322 (56%), Gaps = 19/322 (5%)

Query: 17  LHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLN 73
           + E  + A  +LW     + Y+N+ E+  R ++++KN   I   N E   G  TY+L +N
Sbjct: 25  MFESRLDAHWDLWKKTHEKKYQNEVEEFSRRRLWEKNLMLITMHNLEASMGLHTYELGMN 84

Query: 74  EFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPV 133
              D+T EE   S      PT +I      +A +      S   +P ++DWR +G VT V
Sbjct: 85  HMGDMTPEEIWQSFATLTPPT-DIQRAPSPFAGS------SGADIPDTMDWREKGCVTSV 137

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSY 190
           K QGSCG CW FSAV A+EG    +TG+L+ LS Q ++DCS   G+ GC GG+MD AF Y
Sbjct: 138 KTQGSCGSCWAFSAVGALEGQLAKKTGKLVDLSPQNLVDCSTKYGNHGCNGGFMDHAFQY 197

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR-QPVSV 248
           +I +QG+  +  YPY  R   C++   + +AA   SY  +P   E AL+ A++   P+SV
Sbjct: 198 VIDNQGIDSDASYPYTGRSDQCHYNP-SYRAANCSSYNFLPEGDEGALKQALATIGPISV 256

Query: 249 AIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFI 307
           AIDA+ P F +Y  GV+  P C   +NH V  VGYG+ N   YWL+KNSWG  +G+ G+I
Sbjct: 257 AIDATRPRFIFYRSGVYNDPSCSQEVNHGVLAVGYGTLNGQDYWLVKNSWGTKFGDQGYI 316

Query: 308 RMRRDVGGAGLCGIARKASYPI 329
           RM R+      CGIA    YPI
Sbjct: 317 RMARNQNDQ--CGIAMYGCYPI 336


>gi|350412176|ref|XP_003489564.1| PREDICTED: cathepsin L-like [Bombus impatiens]
          Length = 343

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/312 (42%), Positives = 175/312 (56%), Gaps = 19/312 (6%)

Query: 32  QSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQ-----TYKLSLNEFADLTDEEFIAS 86
           +  + YKN  E+  R KIF  N   I K N  GN      +YKL +N++ D+   EF+ +
Sbjct: 34  EHNKVYKNDIEERFRMKIFMDNKHKIAKHN--GNYEMKKVSYKLKMNKYGDMLHHEFVNT 91

Query: 87  HTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFS 146
             G+           +      F  P +   LP+++DWR  GAVTPVK+QG CG CW FS
Sbjct: 92  LNGFNKSINTQLRSERLPIGASFIEP-ANVVLPKTVDWREHGAVTPVKDQGHCGSCWSFS 150

Query: 147 AVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVY 203
           A  A+EG    RTG LI LSEQ ++DCS   G+ GC GG MD AF YI  ++GL  E  Y
Sbjct: 151 ATGALEGQHFRRTGILIPLSEQNLIDCSGKYGNNGCNGGLMDQAFQYIKDNKGLDTEVTY 210

Query: 204 PYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR-QPVSVAIDASSPGFRYYS 261
           PY+     C +   A   AR   Y D+P  +E  L+ AV+   PVSVAIDAS   F++YS
Sbjct: 211 PYEAENDKCRY-NAANSGARDVGYVDIPQGNEKKLKAAVATIGPVSVAIDASHQSFQFYS 269

Query: 262 GGVFAGP--CGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGGAGL 318
            GV+  P     NL+H V  VGYG+   G  YWL+KNSWG+ WG+ G+I+M R+      
Sbjct: 270 EGVYYEPECSSENLDHGVLAVGYGTDENGQDYWLVKNSWGETWGDNGYIKMARN--KLNH 327

Query: 319 CGIARKASYPIA 330
           CGIA  ASYP+ 
Sbjct: 328 CGIASTASYPLV 339


>gi|310975577|gb|ADP55137.1| cathepsin S [Miichthys miiuy]
          Length = 338

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/322 (40%), Positives = 176/322 (54%), Gaps = 18/322 (5%)

Query: 17  LHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLN 73
           + +  +    ELW     +TY+N  E   R ++++KN   I   N E   G  TYKLS+N
Sbjct: 25  MFDSKLDGHWELWKKMHGKTYRNYVEDESRRELWEKNLVLITMHNLEASMGLHTYKLSMN 84

Query: 74  EFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPV 133
              DLT EE + S      PT +I      +A        S   +P ++DWR +G VT V
Sbjct: 85  HMGDLTPEEIMQSFATLTPPT-DIQRAPSPFAGT------SGAAVPDTMDWREKGCVTSV 137

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSY 190
           K QG+CG CW FSA  A+EG     TG+L+ LS Q ++DCS   G+ GC GG+M  AF Y
Sbjct: 138 KMQGACGSCWAFSAAGALEGQLAKTTGKLVDLSPQNLVDCSTKYGNHGCNGGFMHKAFQY 197

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR-QPVSV 248
           +I + G+  +  YPY  R+          +AA    Y  +P   E AL+ A++   P+SV
Sbjct: 198 VIDNHGIDSDAAYPYTGRQSQECHYSPKFRAANCSQYSFLPEGDEGALKQALATIGPISV 257

Query: 249 AIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFI 307
           AIDA  P F +YS GV+  P C  ++NH V  VGYG+ N   YWL+KNSWGQ +G+ G+I
Sbjct: 258 AIDARRPRFAFYSSGVYDDPSCSQDVNHGVLAVGYGTLNGQDYWLVKNSWGQTFGDNGYI 317

Query: 308 RMRRDVGGAGLCGIARKASYPI 329
           RM R+      CGIAR   YPI
Sbjct: 318 RMARNKNDQ--CGIARYGCYPI 337


>gi|195381187|ref|XP_002049336.1| GJ20806 [Drosophila virilis]
 gi|194144133|gb|EDW60529.1| GJ20806 [Drosophila virilis]
          Length = 339

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/343 (37%), Positives = 199/343 (58%), Gaps = 17/343 (4%)

Query: 1   MLIIMVTWASLVMSRTL-HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEK 59
           M I+    A + +++ + + D I  + + +  +  + Y ++ E+  R KIF +N   I K
Sbjct: 1   MRILFALLALVAVAQAVSYADVIKEEWQTFKLEHRKNYVDETEERFRLKIFNENKHKIAK 60

Query: 60  FNR---EGNQTYKLSLNEFADLTDEEFIASHTGYKMPT-RNISNQSQSYANNWFGYPDSR 115
            N+    G  ++K+++N++AD+   EF  +  G+     + +     S+    F  P+  
Sbjct: 61  HNQRYASGEVSFKMAVNKYADMLHHEFHTTMNGFNYTLHKQLRASDPSFVGVTFISPEHV 120

Query: 116 RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS- 174
           + +P+S+DWR++GAVT VK+QG CG CW FS+  A+EG    + G LISLSEQ ++DCS 
Sbjct: 121 K-IPKSVDWRSKGAVTEVKDQGHCGSCWAFSSTGALEGQHFRKAGTLISLSEQNLVDCST 179

Query: 175 --GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT 232
             G+ GC GG MD+AF YI  + G+  E+ YPY+  +  C++ +  + A   R   D+P 
Sbjct: 180 KYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGIDDSCHFNKATIGATD-RGSVDIPQ 238

Query: 233 -SELALRYAVSR-QPVSVAIDASSPGFRYYSGGVFAGP-CG-NNLNHAVTIVGYGSSNEG 288
             E  +  AV+   PVSVAIDAS   F++YS G++  P C   NL+H V +VGYG+   G
Sbjct: 239 GDEKKMAEAVATIGPVSVAIDASHESFQFYSEGIYNEPQCDPQNLDHGVLVVGYGTDESG 298

Query: 289 -PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
             YWL+KNSWG  WG+ GFI+M R+      CGIA  +SYP+ 
Sbjct: 299 QDYWLVKNSWGTTWGDKGFIKMARNADNQ--CGIASASSYPLV 339


>gi|66378053|gb|AAY45871.1| cathepsin L-like cysteine proteinase [Longidorus elongatus]
          Length = 358

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/312 (41%), Positives = 188/312 (60%), Gaps = 17/312 (5%)

Query: 32  QSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIASHT 88
           + A++YK + E+ +RF++F  N + IE+ N E   G  ++ LSLN+FAD+T+ EF     
Sbjct: 49  KHAKSYKTKDEELLRFQVFASNHKVIEQHNIEYEAGQHSFALSLNKFADMTNAEFRQRMN 108

Query: 89  GYKMPTRNISNQSQSYANN--WFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFS 146
           G+K+P +    +SQ    +   F  PD+   +P S+DWR  G VT VK+QGSCG CW FS
Sbjct: 109 GFKLPAKRKLAKSQPLKEDGMIFEMPDNVT-IPDSVDWRKEGYVTKVKDQGSCGSCWAFS 167

Query: 147 AVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVY 203
           A  ++EG    +TG+L+SLSEQ ++DC       GC GG+MD AF Y+  ++G+  E  Y
Sbjct: 168 ATGSLEGQHYKQTGKLVSLSEQNLVDCDVNGDDEGCNGGYMDGAFQYVETNKGIDTEASY 227

Query: 204 PYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-PVSVAIDASSPGFRYYS 261
           PY+ R+G C ++   + A     + D+P  +E  L  A++   PVSVAIDA+S  F++YS
Sbjct: 228 PYKGRDGRCRFKSEDVGATDT-GFVDIPEGNETLLEAAIATVGPVSVAIDAASFKFQFYS 286

Query: 262 GGVFAG-PCGNN-LNHAVTIVGYGSSNEGP-YWLIKNSWGQNWGEGGFIRMRRDVGGAGL 318
            GV+    C    L+H V  VGY S+ +G  Y+++KNSW ++WG+ G+I M R       
Sbjct: 287 HGVYYDRSCSPEYLDHGVLAVGYNSTKDGKQYYIVKNSWSEDWGDDGYILMSRRKNNN-- 344

Query: 319 CGIARKASYPIA 330
           CGIA  ASYP  
Sbjct: 345 CGIATMASYPFV 356


>gi|334332720|ref|XP_001367595.2| PREDICTED: cathepsin L1-like [Monodelphis domestica]
          Length = 333

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/328 (39%), Positives = 186/328 (56%), Gaps = 20/328 (6%)

Query: 11  LVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQT 67
           LV +    + ++ ++   W AQ  RTY    E   R   ++KN + IE  N E   G  +
Sbjct: 14  LVAATPEFDQTLDSQWHQWKAQHRRTYAAN-EDGWRRATWEKNLKMIEMHNLEYSAGKHS 72

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR 127
           ++L +N+F D+T EEF     GY       SN SQ               LP+S+DWR +
Sbjct: 73  FQLGMNKFGDMTTEEFKQVMNGYN------SNGSQKRTKGSLYREPLLAQLPKSVDWREK 126

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWM 184
           G VTPVKNQG CG CW FSA  ++EG    +T +L+SLSEQ ++DCS   G+ GC GG M
Sbjct: 127 GYVTPVKNQGQCGSCWAFSATGSLEGQWFHKTKKLVSLSEQNLVDCSTSEGNNGCSGGLM 186

Query: 185 DDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR 243
           D+AF Y+  + G+  E+ YPY  ++  C + R     A +  + D+P+ +E AL  AV+ 
Sbjct: 187 DNAFEYVKNNGGIDTEQAYPYLGQDNECKY-RAECSGANVTGFVDIPSMNERALMKAVAN 245

Query: 244 -QPVSVAIDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQN 300
             P+SVAIDA +P F++Y  GV+  P    + L+H V +VGYGS  +  YW++KNSWG+ 
Sbjct: 246 VGPISVAIDAGNPSFQFYESGVYYEPQCSSSQLDHGVLVVGYGSIGKDEYWIVKNSWGEE 305

Query: 301 WGEGGFIRMRRDVGGAGLCGIARKASYP 328
           WG+ G++ M +       CGIA  ASYP
Sbjct: 306 WGKKGYVLMAKFRNNH--CGIATAASYP 331


>gi|118123|sp|P25782.1|CYSP2_HOMAM RecName: Full=Digestive cysteine proteinase 2; Flags: Precursor
 gi|11053|emb|CAA45128.1| cysteine proteinase preproenzyme [Homarus americanus]
          Length = 323

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/315 (41%), Positives = 191/315 (60%), Gaps = 25/315 (7%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEF 83
           E +  +  R Y +  E + R  IF++N ++IE+FN++   G  T+ L++N+F D+T EEF
Sbjct: 21  EHFKGKYGRQYVDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEF 80

Query: 84  IASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRS--IDWRARGAVTPVKNQGSCGC 141
            A   G      NI  +S   +     YP    G P++  +DWR +GAVTPVK+QG CG 
Sbjct: 81  NAVMKG------NIPRRSAPVS---VFYPKKETG-PQATEVDWRTKGAVTPVKDQGQCGS 130

Query: 142 CWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLT 198
           CW FS   ++EG   ++TG LISL+EQQ++DCS   G +GC GGWM+DAF YI  + G+ 
Sbjct: 131 CWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAFDYIKANNGID 190

Query: 199 DERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR-QPVSVAIDASSPG 256
            E  YPY+ R+G C +   ++ AA    + ++ + SE  L+ AV    P+SV IDA+   
Sbjct: 191 TEAAYPYEARDGSCRFDSNSV-AATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSS 249

Query: 257 FRYYSGGVFAGP-CGNN-LNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVG 314
           F++YS GV+  P C  + L+HAV  VGYGS     +WL+KNSW  +WG+ G+I+M R+  
Sbjct: 250 FQFYSSGVYYEPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGDAGYIKMSRNRN 309

Query: 315 GAGLCGIARKASYPI 329
               CGIA  ASYP+
Sbjct: 310 NN--CGIATVASYPL 322


>gi|115743|sp|P07154.2|CATL1_RAT RecName: Full=Cathepsin L1; AltName: Full=Cyclic protein 2;
           Short=CP-2; AltName: Full=Major excreted protein;
           Short=MEP; Contains: RecName: Full=Procathepsin L;
           Contains: RecName: Full=Cathepsin L1 heavy chain;
           Contains: RecName: Full=Cathepsin L1 light chain; Flags:
           Precursor
 gi|38648869|gb|AAH63175.1| Cathepsin L1 [Rattus norvegicus]
 gi|149029152|gb|EDL84437.1| cathepsin L, isoform CRA_a [Rattus norvegicus]
 gi|386267881|dbj|BAM14518.1| cathepsin L [Rattus norvegicus]
          Length = 334

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/325 (39%), Positives = 184/325 (56%), Gaps = 26/325 (8%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEF 75
           + + +A+   W +   R Y    E+  R  +++KN R I+  N E   G   + + +N F
Sbjct: 22  DQTFNAQWHQWKSTHRRLYGTNEEEWRR-AVWEKNMRMIQLHNGEYSNGKHGFTMEMNAF 80

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
            D+T+EEF     GY+          +      F  P   + +P+++DWR +G VTPVKN
Sbjct: 81  GDMTNEEFRQIVNGYR--------HQKHKKGRLFQEPLMLQ-IPKTVDWREKGCVTPVKN 131

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYII 192
           QG CG CW FSA   +EG   ++TG+LISLSEQ ++DCS   G++GC GG MD AF YI 
Sbjct: 132 QGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIK 191

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSR-QPVSVAID 251
            + GL  E  YPY+ ++G C + R     A    + D+P  E AL  AV+   P+SVA+D
Sbjct: 192 ENGGLDSEESYPYEAKDGSCKY-RAEYAVANDTGFVDIPQQEKALMKAVATVGPISVAMD 250

Query: 252 ASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYG----SSNEGPYWLIKNSWGQNWGEGG 305
           AS P  ++YS G++  P     +L+H V +VGYG     SN+  YWL+KNSWG+ WG  G
Sbjct: 251 ASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDG 310

Query: 306 FIRMRRDVGGAGLCGIARKASYPIA 330
           +I++ +D      CG+A  ASYPI 
Sbjct: 311 YIKIAKDRNNH--CGLATAASYPIV 333


>gi|339765072|gb|AEK01110.1| cathepsin L [Cristaria plicata]
 gi|397880684|gb|AFO67888.1| cathepsin L [Cristaria plicata]
          Length = 333

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/337 (39%), Positives = 196/337 (58%), Gaps = 21/337 (6%)

Query: 4   IMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE 63
           I++ +  L  +  L   +++   + ++    +TY    E+  R+ ++K+N   I + N +
Sbjct: 8   IVIVFLHLKSADGLSVSALNIGWQEFVRTHNKTYSAH-EELFRYAVWKENVLAINRHNSK 66

Query: 64  GNQ---TYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
            +Q   TY LS+NE+ DLT+EE+    TG+ M      N +   + + F Y +     PR
Sbjct: 67  ADQGVHTYWLSMNEYGDLTNEEYFRLRTGFIM------NGNIERSGSIFKYTNLSE-YPR 119

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSR 177
            +DWR +G VT VK+QG CG C+ FSA  A+EG    +TG+L+SLSEQ ++DCS   G++
Sbjct: 120 QVDWRRKGYVTRVKDQGGCGSCYAFSATGALEGQHFRKTGKLVSLSEQNIVDCSFKEGNK 179

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELA 236
           GC GG MD +F+YI  + G+  E  YPY+ R+G C ++R  + A   R Y D+P   E A
Sbjct: 180 GCKGGLMDKSFTYIKNNNGIDKEEAYPYEARDGPCRFRRSEVGATD-RGYVDLPENDETA 238

Query: 237 LRYAVSR-QPVSVAIDASSPGFRYYSGGVFAGP-CG-NNLNHAVTIVGYGSSNEGPYWLI 293
           LR+AV+   P+SVAID     FR+Y  GVF  P C    +NH V +VGYG+ N   YW++
Sbjct: 239 LRHAVATIGPISVAIDGHHFNFRFYDHGVFDNPNCSKTKINHGVLVVGYGTRNGLDYWMV 298

Query: 294 KNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           KNSWG+ WG  G+I M R+      C IA  ASYPI 
Sbjct: 299 KNSWGRGWGAKGYILMSRN--NDNQCCIACAASYPIV 333


>gi|340727787|ref|XP_003402217.1| PREDICTED: cathepsin L-like [Bombus terrestris]
          Length = 343

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/312 (42%), Positives = 175/312 (56%), Gaps = 19/312 (6%)

Query: 32  QSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQ-----TYKLSLNEFADLTDEEFIAS 86
           +  + YKN  E+  R KIF  N   I K N  GN      +YKL +N++ D+   EF+ +
Sbjct: 34  EHNKVYKNDVEERFRMKIFMDNKHKIAKHN--GNYEMKKVSYKLKMNKYGDMLHHEFVNT 91

Query: 87  HTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFS 146
             G+           +      F  P +   LP+++DWR  GAVTPVK+QG CG CW FS
Sbjct: 92  LNGFNKSINTQLRSERLPIAASFIEP-ANVVLPKTVDWREHGAVTPVKDQGHCGSCWSFS 150

Query: 147 AVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVY 203
           A  A+EG    RTG LI LSEQ ++DCS   G+ GC GG MD AF YI  ++GL  E  Y
Sbjct: 151 ATGALEGQHFRRTGILIPLSEQNLIDCSGKYGNNGCNGGLMDQAFQYIKDNKGLDTEVTY 210

Query: 204 PYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR-QPVSVAIDASSPGFRYYS 261
           PY+     C +   A   AR   Y D+P  +E  L+ AV+   PVSVAIDAS   F++YS
Sbjct: 211 PYEAENDKCRY-NAANSGARDVGYVDIPQGNEKKLKAAVATIGPVSVAIDASHQSFQFYS 269

Query: 262 GGVFAGP--CGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGGAGL 318
            GV+  P     NL+H V  VGYG+   G  YWL+KNSWG+ WG+ G+I+M R+      
Sbjct: 270 EGVYYEPECSSENLDHGVLAVGYGTDENGQDYWLVKNSWGETWGDNGYIKMARN--KLNH 327

Query: 319 CGIARKASYPIA 330
           CGIA  ASYP+ 
Sbjct: 328 CGIASTASYPLV 339


>gi|156399477|ref|XP_001638528.1| predicted protein [Nematostella vectensis]
 gi|156225649|gb|EDO46465.1| predicted protein [Nematostella vectensis]
          Length = 325

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/327 (40%), Positives = 188/327 (57%), Gaps = 20/327 (6%)

Query: 10  SLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYK 69
           ++++++   E S   +   W     +TY  + E+ +R  I+  N   ++K N E N +YK
Sbjct: 11  AVLIAQCFSELSQDRQWHAWKDFHGKTYTGE-EEDLRRAIWNDNLEIVKKHNAE-NHSYK 68

Query: 70  LSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGA 129
           L +N FADLT  EF     GY+         S S   + F  P S   LP  +DWR +G 
Sbjct: 69  LDMNHFADLTVTEFKQRFMGYRAA-------SNSTGGSTF-LPLSNVQLPAEVDWRDKGF 120

Query: 130 VTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDD 186
           VT VKNQG CG CW FS+  ++EG    +TG+L+SLSEQ ++DCS   G+ GC GG MD 
Sbjct: 121 VTAVKNQGQCGSCWAFSSTGSLEGQHFRKTGKLVSLSEQNLVDCSKKYGNNGCEGGLMDY 180

Query: 187 AFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR-Q 244
           AF YI  + G+  E+ YPY  R+G C+++ G++  A +  Y DV   SE  L+ AV+   
Sbjct: 181 AFKYIKNNDGIDTEQSYPYTARDGQCHFKPGSV-GATVTGYTDVQRGSEGDLQSAVATVG 239

Query: 245 PVSVAIDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
           P+SVAIDA    F+ Y  GV++ P      L+H V  VGYG+ +   YWL+KNSWG+ WG
Sbjct: 240 PISVAIDAGHSSFQLYKTGVYSEPDCSSTQLDHGVLAVGYGAEDGKDYWLVKNSWGEGWG 299

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYPI 329
             G+I+M R+      CGIA +ASYP+
Sbjct: 300 MNGYIKMSRNKDNQ--CGIATQASYPL 324


>gi|228244|prf||1801240B Cys protease 2
          Length = 323

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/314 (41%), Positives = 186/314 (59%), Gaps = 23/314 (7%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEF 83
           E +  +  R Y +  E + R  IF++N ++IE+FN++   G  T+ L++N+F D+T EEF
Sbjct: 21  EHFKGKYGRQYVDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEF 80

Query: 84  IASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRS--IDWRARGAVTPVKNQGSCGC 141
            A   G      NI  +S   +     YP    G P++  +DWR +GAVTPVK+QG CG 
Sbjct: 81  NAVMKG------NIPRRSAPVS---VFYPKKETG-PQATEVDWRTKGAVTPVKDQGQCGS 130

Query: 142 CWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLT 198
           CW FS   ++EG   ++TG LISL+EQQ++DCS   G +GC GGWM+DAF YI  + G+ 
Sbjct: 131 CWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAFDYIKANNGID 190

Query: 199 DERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSR-QPVSVAIDASSPGF 257
            E  YPY+ R+G C +   ++ A           SE  L+ AV    P+SV IDA+   F
Sbjct: 191 TEASYPYEARDGSCRFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSF 250

Query: 258 RYYSGGVFAGP-CGNN-LNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG 315
           ++YS GV+  P C  + L+HAV  VGYGS     +WL+KNSW  +WG+ G+I+M R+   
Sbjct: 251 QFYSSGVYYEPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGDAGYIKMSRNRNN 310

Query: 316 AGLCGIARKASYPI 329
              CGIA  ASYP+
Sbjct: 311 N--CGIATVASYPL 322


>gi|225707912|gb|ACO09802.1| Cathepsin K precursor [Osmerus mordax]
          Length = 331

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/327 (40%), Positives = 193/327 (59%), Gaps = 19/327 (5%)

Query: 12  VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTY 68
            ++  + E S+  + E W     + Y    E+ +R  I++KN R IE  N+E   G  +Y
Sbjct: 14  TLAHPMDEVSLDTEWENWKTTHNKEYNGLDEEGIRRAIWEKNMRMIEAHNQEAALGMHSY 73

Query: 69  KLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARG 128
           +L +N   D+T EE      G ++P     N+ +    N F   ++   LP+SID+R +G
Sbjct: 74  ELGMNNLGDMTSEEVAEKMMGLQVPL----NRDRG---NTFVPDNTVERLPKSIDYRRKG 126

Query: 129 AVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSRGCYGGWMDDA 187
            VTPVKNQGSCG CW FS+V A+EG     TG+L+ LS Q ++DC + + GC GG+M +A
Sbjct: 127 MVTPVKNQGSCGSCWAFSSVGALEGQLMKTTGKLVDLSPQNLVDCVTENNGCGGGYMTNA 186

Query: 188 FSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSRQ-P 245
           F+Y+  +QG+  E  YPY  ++  C +    M A+  R Y+++P  +E AL  AV++  P
Sbjct: 187 FNYVRDNQGIDSEAAYPYIGQDETCAYNVSGMTAS-CRGYKEIPEGNERALTVAVAKVGP 245

Query: 246 VSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWG 302
           VSV IDA+   F++Y  GV+     N  ++NHAV  VGYG + +G  YW++KNSW ++WG
Sbjct: 246 VSVGIDATLSTFQFYQKGVYYDRNCNKDDINHAVLAVGYGVTPKGKKYWIVKNSWSESWG 305

Query: 303 EGGFIRMRRDVGGAGLCGIARKASYPI 329
             G+I M R+ G   LCGIA  ASYPI
Sbjct: 306 NKGYILMARNRG--NLCGIANLASYPI 330


>gi|449673497|ref|XP_002169904.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 325

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/335 (38%), Positives = 190/335 (56%), Gaps = 20/335 (5%)

Query: 3   IIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNR 62
           +I V+  +L     + +    +   +W     + Y +++E+ +R+ I+K N   I ++N 
Sbjct: 4   LIFVSLITLCFGYIIEKPIRESSWYVWKMAHNKAYSHESEENVRYAIWKDNMNRITEYNS 63

Query: 63  EGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSI 122
           + ++   L +N F D+T+ EF A   G  +           + N       S    P ++
Sbjct: 64  K-SKNVILRMNHFGDMTNTEFRAKMNGLLL---------HKHQNGSTFLVPSHTAAPDAV 113

Query: 123 DWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGC 179
           DWR+ G VTPVKNQG CG CW FS+  A+EG    +TGRL+SLSEQ ++DCS   G+ GC
Sbjct: 114 DWRSEGYVTPVKNQGQCGSCWAFSSTGALEGQHFKKTGRLVSLSEQNLVDCSTDYGNNGC 173

Query: 180 YGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALR 238
            GG MD+AFSYI  + G+  E  YPY+ ++G C + + ++  A    + D+P   E AL+
Sbjct: 174 NGGLMDNAFSYIKANGGIDTETGYPYEGQDGTCRYSKSSI-GADDTGFVDIPEGDEDALK 232

Query: 239 YAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CG-NNLNHAVTIVGYGSSNEGPYWLIKN 295
            AV+   PVSVAIDAS   F++Y  GV+  P C  + L+H V +VGYG+ N   YWL+KN
Sbjct: 233 QAVATVGPVSVAIDASHMSFQFYHSGVYDEPQCSPSALDHGVLVVGYGTDNGKDYWLVKN 292

Query: 296 SWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           SWG  WG  G+I M R+      CGIA KASYP+ 
Sbjct: 293 SWGTGWGTEGYIYMSRN--NQNQCGIASKASYPLV 325


>gi|33112581|gb|AAP94046.1| cathepsin-L-like cysteine peptidase 02 [Tenebrio molitor]
          Length = 337

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 126/307 (41%), Positives = 189/307 (61%), Gaps = 16/307 (5%)

Query: 35  RTYKNQAEKAMRFKIFKKNFRFIEKFNR---EGNQTYKLSLNEFADLTDEEFIASHTGYK 91
           + Y++  E+  R KIF +N   + K N+   +G  ++KL +N++AD+   EF+    G+ 
Sbjct: 36  KQYQSDTEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADMLHHEFVQVLNGFN 95

Query: 92  MPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAV 151
                + +     +  +   P +   LP  IDWR +GAVTPVK+QG CG CW FSA  ++
Sbjct: 96  RTKSGLRSGESDDSVTFL--PPANVQLPGQIDWRDKGAVTPVKDQGQCGSCWSFSATGSL 153

Query: 152 EGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRR 208
           EG    ++G+L+SLSEQ ++DCS   G+ GC GG MD+AF YI  + G+  E+ YPY+  
Sbjct: 154 EGQHFRKSGKLVSLSEQNLVDCSEKFGNNGCNGGLMDNAFRYIKANGGIDTEQAYPYKAE 213

Query: 209 EGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR-QPVSVAIDASSPGFRYYSGGVFA 266
           +  C++ +   K A  R Y D+ + +E  L+ AV+   PVSVAIDAS   F+ YSGGV+ 
Sbjct: 214 DEKCHY-KPKNKGATDRGYVDIESGNEDKLQSAVATVGPVSVAIDASHQSFQLYSGGVYY 272

Query: 267 GP-CG-NNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIAR 323
            P C  + L+H V +VGYG+ ++G  YWL+KNSWG++WG+ G+I+M R+      CGIA 
Sbjct: 273 EPECSPSQLDHGVLVVGYGTEDDGTDYWLVKNSWGKSWGDQGYIKMARNRDNN--CGIAT 330

Query: 324 KASYPIA 330
           +ASYP+ 
Sbjct: 331 EASYPLV 337


>gi|225718114|gb|ACO14903.1| Cathepsin L precursor [Caligus clemensi]
          Length = 336

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 128/322 (39%), Positives = 184/322 (57%), Gaps = 20/322 (6%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFA 76
           D + +  E W     +TY +  E+ +R KI+ +N   I + N E   G   Y + +N + 
Sbjct: 24  DVVLSDWESWKLMHGKTYSSSIEEKLRLKIYMENSLKISRHNSEALNGIHPYYMKMNHYG 83

Query: 77  DLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQ 136
           DL   EF+A   GY+      +N++ S    +   P+    LP  +DWR  GAVTPVKNQ
Sbjct: 84  DLLHHEFVAMVNGYQY-----ANKTASLGGTYI--PNKNIQLPTHVDWREEGAVTPVKNQ 136

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIR 193
           G CG CW FSA  A+EG    +TG+LISLSEQ ++DCS   G+ GC GG MD AF+YI  
Sbjct: 137 GQCGSCWSFSATGALEGQDFRKTGKLISLSEQNLVDCSRKFGNNGCEGGLMDFAFTYIRD 196

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVS-RQPVSVAIDA 252
           ++G+  E  YPY+  +G+C++       + I        SE  L+ AV+   P+SVAIDA
Sbjct: 197 NKGIDTEASYPYEGIDGHCHYNPKNKGGSDIGFVDIKKGSEKDLKKAVAGVGPISVAIDA 256

Query: 253 SSPGFRYYSGGVFA-GPCGN-NLNHAVTIVGYGSSNEG--PYWLIKNSWGQNWGEGGFIR 308
           S   F++YS GV+    C +  L+H V +VG+G+ +     YWL+KNSW + WG+ G+I+
Sbjct: 257 SHMSFQFYSHGVYVESKCSSEELDHGVLVVGFGTDSVSGEDYWLVKNSWSEKWGDQGYIK 316

Query: 309 MRRDVGGAGLCGIARKASYPIA 330
           M R+     +CGIA  ASYP+ 
Sbjct: 317 MARN--KENMCGIASSASYPVV 336


>gi|311265493|ref|XP_003130681.1| PREDICTED: cathepsin L1-like [Sus scrofa]
          Length = 332

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 132/325 (40%), Positives = 185/325 (56%), Gaps = 27/325 (8%)

Query: 18  HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNE 74
           H+ S+ A    W A   + Y    E+  R  I++KN + IE+ N   R+G  ++ +++N 
Sbjct: 21  HDHSLDADWYKWKATHRKLY-GLNEEGRRRAIWEKNMKMIERHNWEHRQGKHSFTMAMNA 79

Query: 75  FADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL-PRSIDWRARGAVTPV 133
           F D+T+EEF  +  G++       NQ       +    D+   L P S+DWR +G VT V
Sbjct: 80  FGDMTNEEFRKTMNGFQ-------NQKHKKGKVFL---DAGSALTPHSVDWREKGYVTAV 129

Query: 134 KNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSY 190
           KNQG CG CW FSA  A+EG    +T +LISLSEQ ++DCS   G+ GC GG MD+AF Y
Sbjct: 130 KNQGHCGSCWAFSATGALEGQMFRKTSKLISLSEQNLVDCSWPEGNEGCNGGLMDNAFQY 189

Query: 191 IIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSR-QPVSVA 249
           I  + GL  E  YPY  ++G C ++  +  AA    Y D+P  E AL  AV+   P+SV 
Sbjct: 190 IKDNGGLDSEESYPYFGKDGSCKYKPQS-SAANDTGYVDIPKQEKALMKAVATVGPISVG 248

Query: 250 IDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGY---GSSNEGPYWLIKNSWGQNWGEG 304
           IDAS   F++YS G++  P     +L+H V +VGY   G+ +   YWL+KNSWG  WG  
Sbjct: 249 IDASHESFQFYSTGIYFEPQCSSEDLDHGVLVVGYGVEGAHSNNKYWLVKNSWGNTWGMD 308

Query: 305 GFIRMRRDVGGAGLCGIARKASYPI 329
           G+I+M +D      CGIA  ASYP+
Sbjct: 309 GYIKMTKDQNNH--CGIATMASYPV 331


>gi|302779822|ref|XP_002971686.1| hypothetical protein SELMODRAFT_16221 [Selaginella moellendorffii]
 gi|300160818|gb|EFJ27435.1| hypothetical protein SELMODRAFT_16221 [Selaginella moellendorffii]
          Length = 214

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 114/213 (53%), Positives = 148/213 (69%), Gaps = 6/213 (2%)

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS--RG 178
           S+DWR +G VT +K+QG CG CW FSA+AAVEG+T + TG L+SLSEQ+++DC  +  +G
Sbjct: 1   SVDWRKKGGVTEIKDQGDCGNCWAFSAIAAVEGLTFLSTGTLVSLSEQELVDCDTTVNQG 60

Query: 179 CYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP--TSELA 236
           C GG MD AF Y+IR+ G+T +  YPY+ + G C+  +    AA I  +Q +P  + EL 
Sbjct: 61  CDGGMMDYAFQYMIRNGGITSQSNYPYRAQRGACDKDKVKYHAATINGFQAIPPQSEELL 120

Query: 237 LRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEG-PYWLIKN 295
           LR AV+ QPVSVAI+A    F+ YS GVF G CG+NL+H V IVGYG+   G  YWL+KN
Sbjct: 121 LR-AVANQPVSVAIEAGGQDFQLYSSGVFTGECGSNLDHGVAIVGYGTDAGGRQYWLVKN 179

Query: 296 SWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           SWG  WGE G++RM R   GAG+CGI   ASYP
Sbjct: 180 SWGSGWGESGYVRMERQGPGAGVCGINLDASYP 212


>gi|395819351|ref|XP_003783057.1| PREDICTED: cathepsin L1-like [Otolemur garnettii]
          Length = 333

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/341 (39%), Positives = 190/341 (55%), Gaps = 26/341 (7%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +LI+      +  + ++ + S++A    W A+  + Y    E+  R  +++KN + IE  
Sbjct: 4   LLILAAFCVGITSATSMFDGSLNAHWYRWKAKHRKLY-GMREEGWRRAVWEKNMKMIEVH 62

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N+E   G   + +++N F D+T+EEF     G++       NQ        F  P S   
Sbjct: 63  NQEYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFR-------NQKHK-KGKVFQEP-SFLE 113

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           +P+S+DWR +G VTPVKNQG CG CW FSA  A+EG    +TG+LISLSEQ ++DCS   
Sbjct: 114 VPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLISLSEQNLVDCSRPQ 173

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSE 234
           G+ GC GG MD AF YI  + GL  E  YPY   +  C + R     A    + D+P  E
Sbjct: 174 GNEGCDGGLMDYAFQYIKENGGLDSEESYPYDAMDESCKY-RPEYSVANDTGFVDIPKEE 232

Query: 235 LALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYG----SSNE 287
            AL  AV+   P+SVAIDA    F++Y  GV+  P    +N++H V +VGYG     S+ 
Sbjct: 233 KALMKAVATVGPISVAIDAGHESFQFYKEGVYFEPECSSDNVDHGVLVVGYGYEETESDN 292

Query: 288 GPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
             +WL+KNSWG+ WG GG+I+M +D      CGIA  ASYP
Sbjct: 293 NKFWLVKNSWGEEWGLGGYIKMTKDQ--KNHCGIATAASYP 331


>gi|313507179|pdb|2ACT|A Chain A, Crystallographic Refinement Of The Structure Of Actinidin
           At 1.7 Angstroms Resolution By Fast Fourier
           Least-Squares Methods
          Length = 220

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 107/216 (49%), Positives = 146/216 (67%), Gaps = 4/216 (1%)

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           LP  +DWR+ GAV  +K+QG CG  W FSA+A VEGI KI +G LISLSEQ+++DC    
Sbjct: 1   LPSYVDWRSAGAVVDIKSQGECGGXWAFSAIATVEGINKITSGSLISLSEQELIDCGRTQ 60

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TS 233
            +RGC GG++ D F +II   G+  E  YPY  ++G C+      K   I +Y++VP  +
Sbjct: 61  NTRGCDGGYITDGFQFIINDGGINTEENYPYTAQDGDCDVALQDQKYVTIDTYENVPYNN 120

Query: 234 ELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLI 293
           E AL+ AV+ QPVSVA+DA+   F+ Y+ G+F GPCG  ++HA+ IVGYG+     YW++
Sbjct: 121 EWALQTAVTYQPVSVALDAAGDAFKQYASGIFTGPCGTAVDHAIVIVGYGTEGGVDYWIV 180

Query: 294 KNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           KNSW   WGE G++R+ R+VGGAG CGIA   SYP+
Sbjct: 181 KNSWDTTWGEEGYMRILRNVGGAGTCGIATMPSYPV 216


>gi|356549192|ref|XP_003542981.1| PREDICTED: cysteine proteinase RD21a-like [Glycine max]
          Length = 517

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 124/327 (37%), Positives = 187/327 (57%), Gaps = 16/327 (4%)

Query: 10  SLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTY- 68
           +L + +   E+ +    + W  ++ + Y++  ++ +RF+ FK+N ++I + N +    Y 
Sbjct: 34  ALEIDKFPSEEGVIELFQRWKEENKKIYRSPDQEKLRFENFKRNLKYIAEKNSKRISPYG 93

Query: 69  -KLSLNEFADLTDEEFIASHTG-YKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRA 126
             L LN FAD+++EEF +  T   K P         S  N   G   S    P S+DWR 
Sbjct: 94  QSLGLNRFADMSNEEFKSKFTSKVKKPF--------SKRNGLSGKDHSCEDAPYSLDWRK 145

Query: 127 RGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-GCYGGWMD 185
           +G VT VK+QG CGCCW FS+  A+EGI  I +G LISLSE +++DC  +  GC GG MD
Sbjct: 146 KGVVTAVKDQGYCGCCWAFSSTGAIEGINAIVSGDLISLSEPELVDCDRTNDGCDGGHMD 205

Query: 186 DAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQP 245
            AF +++ + G+  E  YPY   +G CN  +   K   I  Y +V  S+ +L  A  +QP
Sbjct: 206 YAFEWVMHNGGIDTETNYPYSGADGTCNVAKEETKVIGIDGYYNVEQSDRSLLCATVKQP 265

Query: 246 VSVAIDASSPGFRYYSGGVFAGPCG---NNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG 302
           +S  ID SS  F+ Y GG++ G C    ++++HA+ +VGYGS  +  YW++KNSWG +WG
Sbjct: 266 ISAGIDGSSWDFQLYIGGIYDGDCSSDPDDIDHAILVVGYGSEGDEDYWIVKNSWGTSWG 325

Query: 303 EGGFIRMRRDVG-GAGLCGIARKASYP 328
             G+I +RR+     G+C I   ASYP
Sbjct: 326 MEGYIYIRRNTNLKYGVCAINYMASYP 352


>gi|61661067|gb|AAX51229.1| cathepsin S cysteine protease [Paralichthys olivaceus]
          Length = 337

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 132/338 (39%), Positives = 189/338 (55%), Gaps = 20/338 (5%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           ML  ++  +  V +  + +  +    ELW     +TY N+ E   R +++++N   I K 
Sbjct: 10  MLASLLLVSLCVEAAAMLDVRLDVHWELWKKSHGKTYPNEVEDVRRRELWERNLMLITKH 69

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N E   G QTY LS+N   DLT EE + S+     P  +I      +         S   
Sbjct: 70  NLEASMGLQTYDLSMNHMGDLTTEEIMQSYATLT-PPADIQRAPAPFVG-------SGAD 121

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           +P S+DWR +G VT VK QGSCG CW FSA  A+EG     TG+L+ LS Q ++DCS   
Sbjct: 122 VPVSVDWRLQGCVTSVKMQGSCGSCWAFSAAGALEGQLAKTTGKLVDLSPQNLVDCSLKY 181

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-S 233
           G++GC GG+MD AF Y+I ++G+  E  YPY+ +   C++   + +AA    Y  +P   
Sbjct: 182 GNKGCNGGFMDRAFQYVIDNKGIDSEASYPYRGQLQQCSYNP-SYRAANCSRYSFLPEGD 240

Query: 234 ELALRYAVSR-QPVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPYW 291
           E AL+ A++   P+SVAIDA+ P F +Y  GV+  P C   +NH V  VGYG+ +   YW
Sbjct: 241 EGALKNALATIGPISVAIDATRPTFAFYRSGVYNDPTCTQRVNHGVLAVGYGTESGQDYW 300

Query: 292 LIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           L+KNSWG ++G+ G+IRM R+      CGIA   SYPI
Sbjct: 301 LVKNSWGTSFGDKGYIRMSRNKNDQ--CGIALYCSYPI 336


>gi|229893789|gb|ACQ90252.1| cathepsin L [Pinctada fucata]
          Length = 362

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 132/316 (41%), Positives = 179/316 (56%), Gaps = 21/316 (6%)

Query: 26  HELWMAQSA---RTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLT 79
           HE W        + Y    E+  RF IF+     IE+ NR+   G ++Y + +N+F+D++
Sbjct: 51  HETWKEFKTLFGKVYDTVEEEIKRFDIFRDTLERIEEHNRKYHMGQKSYYMGVNQFSDMS 110

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
            +E++  H G +   R  S            Y  S + L   +DWR +G VTPVKNQG C
Sbjct: 111 HDEYL-RHNGLRRGNRKYSK-----GEGCDSYTKSGKQLDDKVDWRDKGYVTPVKNQGQC 164

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---RGCYGGWMDDAFSYIIRSQG 196
           G CW FS   ++EG    +TG+LISLSEQQ++DCSG+    GC GG MD+AF YI    G
Sbjct: 165 GSCWSFSTTGSLEGQHFRQTGKLISLSEQQLVDCSGTFGNEGCNGGLMDNAFEYIKSIGG 224

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAV-SRQPVSVAIDASSP 255
           L  E  YPY  ++G C+ ++   KA            E AL+ A+ S  P+SVAIDAS  
Sbjct: 225 LEGEDDYPYTAKQGKCHLKKSLFKANDTGCTDVESGDEDALKDALASVGPISVAIDASHA 284

Query: 256 GFRYYSGGVF-AGPCGN-NLNHAVTIVGYGS-SNEGPYWLIKNSWGQNWGEGGFIRMRRD 312
            F+ Y GGV+    C + NL+H V  VGYG+  N G YWL+KNSWG+ WGE G+I+M R+
Sbjct: 285 SFQSYDGGVYDEEECSSQNLDHGVLTVGYGTEENGGDYWLVKNSWGEMWGEEGYIKMSRN 344

Query: 313 VGGAGLCGIARKASYP 328
                 CGIA +ASYP
Sbjct: 345 KDNQ--CGIATQASYP 358


>gi|224079085|ref|XP_002305743.1| predicted protein [Populus trichocarpa]
 gi|222848707|gb|EEE86254.1| predicted protein [Populus trichocarpa]
          Length = 494

 Score =  228 bits (580), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 128/321 (39%), Positives = 188/321 (58%), Gaps = 19/321 (5%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFI-EKFNREGNQTYKLSLNEFAD 77
           ++SI    + W  +  + YK+  E   RF  FK+N ++I EK  +E    +++ LN+FAD
Sbjct: 36  DESIIEIFQQWRDRHQKAYKHAEEAEKRFGNFKRNLKYIIEKTGKETTLRHRVGLNKFAD 95

Query: 78  LTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL-----PRSIDWRARGAVTP 132
           L++EEF      Y    +   N+++  A +      SRR L     P S+DWR +G VT 
Sbjct: 96  LSNEEF---KQLYLSKVKKPINKTRIDAED-----RSRRNLQSCDAPSSLDWRKKGVVTA 147

Query: 133 VKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSR-GCYGGWMDDAFSYI 191
           VK+QG CG CW FS   A+EGI  I T  LISLSEQ+++DC  +  GC GG+MD AF ++
Sbjct: 148 VKDQGDCGSCWSFSTTGAIEGINAIVTSDLISLSEQELVDCDTTNYGCEGGYMDYAFEWV 207

Query: 192 IRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAID 251
           I + G+  E  YPY   +G CN  +  +K   I  Y+DV  ++ AL  A ++QP+SV ID
Sbjct: 208 INNGGIDTEANYPYTGVDGTCNTAKEEIKVVSIDGYKDVDETDSALLCAAAQQPISVGID 267

Query: 252 ASSPGFRYYSGGVF---AGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIR 308
            S+  F+ Y+GG++        ++++HAV IVGYGS N   YW++KNSWG +WG  G+  
Sbjct: 268 GSAIDFQLYTGGIYDGDCSDDPDDIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIEGYFY 327

Query: 309 MRRDVGGA-GLCGIARKASYP 328
           ++R+     G+C I   ASYP
Sbjct: 328 IKRNTDLPYGVCAINAMASYP 348


>gi|33348834|gb|AAQ16117.1| cathepsin L-like cysteine proteinase A [Rhipicephalus
           haemaphysaloides haemaphysaloides]
          Length = 332

 Score =  228 bits (580), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 130/347 (37%), Positives = 187/347 (53%), Gaps = 38/347 (10%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L ++    ++ ++   HE  +  + E +     ++Y++  E+ +RFKIF +N   I K N
Sbjct: 4   LSLLCAIVAVTVAANSHE-ILRTQWEAFKTTHKKSYESHMEELLRFKIFTENSLIIAKHN 62

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYK----------MPTRNISNQSQSYANNW 108
            +   G  +YKL +N+F DL   EF     GY+          MP  N+++ S       
Sbjct: 63  AKYAKGLVSYKLGMNQFGDLLAHEFAKIFNGYRGQRTSRGSTFMPPANVNDSS------- 115

Query: 109 FGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQ 168
                    LP ++DWR +GAVTPVK+QG CG CW FSA  ++EG   ++ G L+SLSEQ
Sbjct: 116 ---------LPSTVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKDGELVSLSEQ 166

Query: 169 QVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIR 225
            ++DCS   G+ GC GG MD+AF YI  + G+  E  YPY+  +  C +++  + A    
Sbjct: 167 NLVDCSQSFGNNGCEGGLMDNAFKYIKANDGIDAEESYPYEAMDDKCRFKKEDVGATDTG 226

Query: 226 SYQDVPTSELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGY 282
                  SE  L+ AV+   P+SVAIDA    F+ YS GV+  P      L+H V  VGY
Sbjct: 227 FVDIEGGSEDDLKKAVATVGPISVAIDAGHSSFQLYSEGVYDEPECSSEELDHGVLAVGY 286

Query: 283 GSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           G  +   YWL+KNSWG +WG+ G+I M RD      CGIA  ASYP+
Sbjct: 287 GVKDGKKYWLVKNSWGGSWGDNGYILMSRDKNNQ--CGIASAASYPL 331


>gi|375340657|emb|CBJ56264.1| cathepsin S protein [Dicentrarchus labrax]
          Length = 337

 Score =  228 bits (580), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 130/338 (38%), Positives = 186/338 (55%), Gaps = 19/338 (5%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           ML  ++  +  V +  + E  + A  +LW     + Y+ + E   R ++++KN   I   
Sbjct: 9   MLGSLMLVSLCVGAAAMFEPKLDAHWKLWKMTHGKKYQTEVEDVSRRELWEKNLMLITMH 68

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N E   G  TY+LS+N   DLT EE + S      PT +I   +  +A        +   
Sbjct: 69  NLEASMGLHTYELSMNHMGDLTQEEIMQSFATLSPPT-DIQRAASPFAGT------TGAD 121

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           +P ++DWR +G VT VK QGSCG CW FSA  A+EG     TG+L+ LS Q ++DCS   
Sbjct: 122 VPDTMDWREKGCVTSVKMQGSCGSCWAFSAAGALEGQLAKTTGKLVDLSPQNLVDCSTKY 181

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-S 233
           G+ GC GG+M  AF Y+I +QG+  +  YPY  R G C +     +AA    Y  +P  +
Sbjct: 182 GNHGCNGGFMHQAFQYVIDNQGIDSDASYPYTGRNGECRYNS-KFRAANCSQYSFLPEGN 240

Query: 234 ELALRYAVSR-QPVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPYW 291
           E AL+ A++   P+SVAIDA+ P F +Y  GV+  P C   +NH V  VGYG+ +   YW
Sbjct: 241 EGALKEALANIGPISVAIDATRPTFTFYRSGVYNDPNCSQKVNHGVLAVGYGTLDGQDYW 300

Query: 292 LIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           L+KNSWG+ +G+ G+IRM R+      CGIA    YPI
Sbjct: 301 LVKNSWGKTFGDQGYIRMSRNKNDQ--CGIALYGCYPI 336


>gi|261289785|ref|XP_002611754.1| hypothetical protein BRAFLDRAFT_284341 [Branchiostoma floridae]
 gi|229297126|gb|EEN67764.1| hypothetical protein BRAFLDRAFT_284341 [Branchiostoma floridae]
          Length = 327

 Score =  228 bits (580), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 196/333 (58%), Gaps = 24/333 (7%)

Query: 11  LVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQT 67
           LV+S T+   ++  + E +     + YK+  E+ +R  IF+ N + I++ N+E   G ++
Sbjct: 6   LVLSVTM-ATAMDVEWEAFKLTHGKQYKSPDEENVRRAIFRDNNQMIKEHNQEAAMGRRS 64

Query: 68  YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL--PRSIDWR 125
           Y + +N+F DL   E++    G  +   N+S  S+    N F   +S  GL    ++DWR
Sbjct: 65  YFMGMNQFGDLAHSEYLELVVGPGLLPLNLSTPSE----NVF---ESTPGLQVDDTVDWR 117

Query: 126 ARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGG 182
            +GAVTP+K+QG CG CW FS   ++EG   ++TG+L+SLSEQ +LDCS   G++GC GG
Sbjct: 118 QKGAVTPIKDQGHCGSCWAFSTTGSLEGQHFMKTGKLVSLSEQNLLDCSRRFGNKGCEGG 177

Query: 183 WMDDAFSYIIRSQGLTDERVYPYQ-RREGYCNWQRGAMKAARIRSYQDVPT-SELALRYA 240
            MD AF YI  + G+  E  YPY  + E  C++ + +   A + SY D+    E+AL  A
Sbjct: 178 LMDQAFRYIKSNGGIDTEECYPYMAKDEKVCDY-KTSCSGATLSSYTDIKAMDEMALMQA 236

Query: 241 V-SRQPVSVAIDASSPGFRYYSGGVFAGP-CG-NNLNHAVTIVGYGSSNEGPYWLIKNSW 297
           V +  PVSVAIDAS    R+Y  G++  P C    L+H V  VGYGS +   YWL+KNSW
Sbjct: 237 VGTVGPVSVAIDASHKSLRFYKSGIYDEPECSRTKLDHGVLAVGYGSMDGMDYWLVKNSW 296

Query: 298 GQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           G  WG+ G+++M R+      CGIA KASYP+ 
Sbjct: 297 GSAWGDMGYVKMTRNKNNQ--CGIATKASYPVV 327


>gi|290462225|gb|ADD24160.1| Cathepsin L [Lepeophtheirus salmonis]
          Length = 334

 Score =  227 bits (579), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 134/341 (39%), Positives = 186/341 (54%), Gaps = 25/341 (7%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L ++++ AS V       D + +  E W     + Y +  E+ +R KIF +N   I + 
Sbjct: 8   LLSVIISTASAVSFF----DVVLSDWESWKLTHQKGYDSSVEEKLRLKIFMENSLRISRH 63

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N E   G  TY + +N + DL   EF+A   GY      I N   +    +   P     
Sbjct: 64  NAEAIQGRHTYFMKMNHYGDLLHHEFVAMVNGY------IYNNKTTLGGTFI--PSKNIN 115

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           LP  +DWR  GAVTPVKNQG CG CW FSA  ++EG    +TG+LISLSEQ ++DCS   
Sbjct: 116 LPEHVDWREEGAVTPVKNQGQCGSCWSFSATGSLEGQDFRKTGKLISLSEQNLVDCSRKY 175

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSE 234
           G+ GC GG MD AF YI  + G+  E  YPY+  +G+C++       + I        SE
Sbjct: 176 GNNGCEGGLMDYAFKYIQDNNGIDTEASYPYEGIDGHCHYDPKNKGGSDIGFVDIKKGSE 235

Query: 235 LALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFA-GPCG-NNLNHAVTIVGYGSSNEG--P 289
             L+ A++   P+SVAIDAS   F++YS GV++   C   NL+H V  VGYG+       
Sbjct: 236 KDLQKALATVGPISVAIDASHMSFQFYSHGVYSEKKCSPENLDHGVLAVGYGTDEVTGED 295

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           YWL+KNSW + WGE G+I+M R+     +CGIA  ASYP+ 
Sbjct: 296 YWLVKNSWSEKWGEDGYIKMARN--KDNMCGIASSASYPVV 334


>gi|380014284|ref|XP_003691169.1| PREDICTED: cathepsin L-like [Apis florea]
          Length = 345

 Score =  227 bits (579), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 135/344 (39%), Positives = 186/344 (54%), Gaps = 22/344 (6%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMA---QSARTYKNQAEKAMRFKIFKKNFRFI 57
            LI+ +T  + V + +  E      ++ WM    +  + YK+  E+  R KIF  N   I
Sbjct: 4   FLILFITIFATVHAVSFFE----LVNQEWMTFKMEHKKAYKSDVEERFRMKIFMDNKHKI 59

Query: 58  EKFNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDS 114
            K N        +YKL +N++ D+   EF+    G+           +      F  P +
Sbjct: 60  AKHNSNYEMKKVSYKLKMNKYGDMLHHEFVNILNGFNKSINTQLRSERMPIGASFIEP-A 118

Query: 115 RRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS 174
              LP+ +DWR  GAVTPVK+QG CG CW FSA  A+EG    RTG L+SLSEQ ++DCS
Sbjct: 119 NVALPKKVDWRKEGAVTPVKDQGHCGSCWSFSATGALEGQHFRRTGVLVSLSEQNLIDCS 178

Query: 175 ---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP 231
              G+ GC GG MD AF YI  ++GL  E  YPY+     C +      A  +  Y D+P
Sbjct: 179 GKYGNNGCNGGLMDQAFQYIKDNKGLDTEASYPYEAENDKCRYNPANSGAIDV-GYIDIP 237

Query: 232 T-SELALRYAVSR-QPVSVAIDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNE 287
           T +E  L+ AV+   PVSVAIDAS   F++YS GV+  P      L+H V ++GYG++  
Sbjct: 238 TGNEKLLKAAVATIGPVSVAIDASHQSFQFYSEGVYYEPECSSEELDHGVLVIGYGTNEN 297

Query: 288 GP-YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           G  YWL+KNSWG+ WG  G+I+M R+      CGIA  ASYP+ 
Sbjct: 298 GEDYWLVKNSWGETWGNNGYIKMARN--KLNHCGIASSASYPLV 339


>gi|359483753|ref|XP_002266308.2| PREDICTED: oryzain alpha chain-like [Vitis vinifera]
          Length = 501

 Score =  227 bits (579), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 130/354 (36%), Positives = 195/354 (55%), Gaps = 36/354 (10%)

Query: 1   MLIIMVTWASL-VMSRTL------------HEDSISAKHELWMAQSARTYKNQAEKAMRF 47
           + +++  WASL  +S +L             E+ +     LW  +  R YK+  E A RF
Sbjct: 8   LALVLFIWASLACLSSSLPTEFYITGEEFASEERVRELFHLWKERHKRVYKHAEETAKRF 67

Query: 48  KIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPT--------RNISN 99
           +IFK+N +++ + N +G++ + L +N+FAD+++EEF   +               R    
Sbjct: 68  EIFKENLKYVIERNSKGHR-HTLGMNKFADMSNEEFKEKYLSKIKKPINKKNNYLRRSMQ 126

Query: 100 QSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRT 159
           Q +  A+            P S+DWR +G VT +K+QG CG CW FS+  A+EGI  I T
Sbjct: 127 QKKGTASC---------EAPSSLDWRKKGVVTGIKDQGDCGSCWAFSSTGAMEGINAIVT 177

Query: 160 GRLISLSEQQVLDCSGSR-GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGA 218
           G LISLSEQ+++DC  +  GC GG+MD AF ++I + G+  E  YPY   +G CN  +  
Sbjct: 178 GDLISLSEQELVDCDTTNYGCEGGYMDYAFEWVISNGGIDSESDYPYTGTDGTCNTTKED 237

Query: 219 MKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAG---PCGNNLNH 275
            K   I  Y+DV  S+ AL  A   QP+SV +D S+  F+ Y+ G++AG      ++++H
Sbjct: 238 TKVVSIDGYKDVDESDSALLCAAVNQPISVGMDGSALDFQLYTSGIYAGDCSDDPDDIDH 297

Query: 276 AVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYP 328
           AV IVGYGS +   YW+ KNSWG +WG  G+  ++R+     G C I   ASYP
Sbjct: 298 AVLIVGYGSEDSEDYWICKNSWGTSWGMEGYFYIKRNTDLPYGECAINAMASYP 351


>gi|224460525|gb|ACN43674.1| cathepsin L [Paralichthys olivaceus]
          Length = 334

 Score =  227 bits (579), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 135/324 (41%), Positives = 188/324 (58%), Gaps = 20/324 (6%)

Query: 16  TLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSL 72
           +LH+    A    W  +  R+Y + +E+  R +I+ +N   +   N    +G+ TY+L +
Sbjct: 20  SLHDHDFHA----WKLKFGRSYNSSSEEDKRMQIWLRNREIVMAHNAMADQGHSTYRLGM 75

Query: 73  NEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTP 132
             +ADL  EEF  +  G  + + N S   +    + F        LP++IDWR  G VTP
Sbjct: 76  TFYADLEHEEFKQTVFGVCLGSFNAS---KPRGGSSFLKMHRFYNLPQTIDWRQWGFVTP 132

Query: 133 VKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFS 189
           VKNQGSCG CW FS+  A+EG    +TGRL+SLSEQ+++DCS   G+ GC GGWMD+AF 
Sbjct: 133 VKNQGSCGSCWSFSSTGALEGQNFRKTGRLVSLSEQELVDCSGNYGNYGCNGGWMDNAFR 192

Query: 190 YIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR-QPVS 247
           YI+   G+  E  YPY+ + G C    G +  A    Y D+P+ +E AL+ AV+   PVS
Sbjct: 193 YIVNKGGIHTEDSYPYEGQVGQCRANYGEI-GATCTGYYDIPSGNEHALKEAVATFGPVS 251

Query: 248 VAIDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGG 305
           VAI AS   F+ Y  GV+  P   G  L+HAV IVGYG+     YWL+KNSWG  WG+ G
Sbjct: 252 VAIHASDQSFQLYHSGVYNNPYCSGTALDHAVLIVGYGTEYGQDYWLVKNSWGPAWGDQG 311

Query: 306 FIRMRRDVGGAGLCGIARKASYPI 329
           +I+M R+      CGIA  AS+P+
Sbjct: 312 YIKMSRNR--YNQCGIASAASFPL 333


>gi|62955529|ref|NP_001017778.1| cathepsin K precursor [Danio rerio]
 gi|62204416|gb|AAH92901.1| Cathepsin K [Danio rerio]
 gi|182889052|gb|AAI64579.1| Ctsk protein [Danio rerio]
          Length = 333

 Score =  227 bits (579), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 137/337 (40%), Positives = 192/337 (56%), Gaps = 23/337 (6%)

Query: 3   IIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNR 62
           ++++ W  L  + +L   S+    E W     R Y    E+++R  I++KN  FIE  N+
Sbjct: 9   LLVLLWCGL--AHSLDNLSLDEAWESWKITHKREYNGLNEESIRRTIWEKNMLFIEAHNK 66

Query: 63  E---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG-L 118
           E   G  TY L +N F D+T EE      G +MP        +  AN +   PD R G L
Sbjct: 67  EYELGIHTYDLGMNHFGDMTLEEVAEKVMGLQMPMY------RDPANTFV--PDDRVGKL 118

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-SGSR 177
           P+SID+R  G VT VKNQGSCG CW FS+V A+EG      G+L+ LS Q ++DC + + 
Sbjct: 119 PKSIDYRKLGYVTSVKNQGSCGSCWAFSSVGALEGQLMKTKGQLVDLSPQNLVDCVTEND 178

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELA 236
           GC GG+M +AF Y+  +QG+  E  YPY   +  C +    + AA  R Y+++P  +E A
Sbjct: 179 GCGGGYMTNAFRYVSNNQGIDSEESYPYVGTDQQCAYNTSGV-AASCRGYKEIPQGNERA 237

Query: 237 LRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGPCGN--NLNHAVTIVGYGSSNEG-PYWL 292
           L  AV+   PVSV IDA    F YY  GV+  P  N  ++NHAV  VGYG++  G  YW+
Sbjct: 238 LTAAVANVGPVSVGIDAMQSTFLYYKSGVYYDPNCNKEDVNHAVLAVGYGATPRGKKYWI 297

Query: 293 IKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           +KNSWG+ WG+ G++ M R+   A  CGIA  AS+P+
Sbjct: 298 VKNSWGEEWGKKGYVLMARNRNNA--CGIANLASFPV 332


>gi|163914459|ref|NP_001106314.1| cathepsin K precursor [Xenopus laevis]
 gi|159155477|gb|AAI54985.1| LOC100127265 protein [Xenopus laevis]
          Length = 331

 Score =  227 bits (579), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 133/339 (39%), Positives = 200/339 (58%), Gaps = 19/339 (5%)

Query: 1   MLIIMVTWASLVMSRT--LHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIE 58
           ML   +    L M RT   H++++ A+ +LW     + Y  Q ++  R  I++KNF+ I 
Sbjct: 1   MLSFCLLALVLPMVRTDLYHDETLDAEWDLWKRTYHKQYNGQMDELQRRLIWEKNFKMIT 60

Query: 59  KFNREGNQ---TYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSR 115
             N E NQ   TY++++N+  D+T EE + + TG K+  RN         N  F +  + 
Sbjct: 61  SHNFEYNQGLHTYEMAMNQLGDMTSEEVVRTMTGLKIHKRNKP------TNLTFEHDKAP 114

Query: 116 RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-S 174
             +P SID+R +G VTP++NQGSCG CW FS+V A+EG  K + G+L+ LS Q ++DC  
Sbjct: 115 EKVPDSIDYRKKGYVTPIRNQGSCGSCWAFSSVGALEGQLKKKKGKLVVLSPQNLVDCVK 174

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-S 233
            + GC GG+M +AF Y+  ++G+  E+ YPY   +  C +     +AA  + Y++V   +
Sbjct: 175 KNDGCGGGYMTNAFEYVRDNKGIDSEKAYPYVGEDQECMYNVSG-RAAACKGYKEVQEGN 233

Query: 234 ELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEGPY 290
           E AL+ AV+   PVSV IDA    F++YS GV+        ++NHAV  VGYG+  +  Y
Sbjct: 234 EKALKKAVALVGPVSVGIDAGLSSFQFYSKGVYYDKDCSAEDINHAVLAVGYGTQKKAKY 293

Query: 291 WLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           W++KNSWG+ WG+ G+I M +D G A  CGIA  ASYP+
Sbjct: 294 WIVKNSWGEEWGDKGYILMAKDKGNA--CGIANLASYPV 330


>gi|213623956|gb|AAI70449.1| LOC100127265 protein [Xenopus laevis]
          Length = 331

 Score =  227 bits (579), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 133/339 (39%), Positives = 200/339 (58%), Gaps = 19/339 (5%)

Query: 1   MLIIMVTWASLVMSRT--LHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIE 58
           ML   +    L M RT   H++++ A+ +LW     + Y  Q ++  R  I++KNF+ I 
Sbjct: 1   MLSFCLLALVLPMVRTDLYHDETLDAEWDLWKRTYHKQYNGQMDELQRRLIWEKNFKMIT 60

Query: 59  KFNREGNQ---TYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSR 115
             N E NQ   TY++++N+  D+T EE + + TG K+  RN         N  F +  + 
Sbjct: 61  SHNFEYNQGLHTYEMAMNQLGDMTSEEVVRTMTGLKIHKRNKP------TNLTFEHEKAP 114

Query: 116 RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-S 174
             +P SID+R +G VTP++NQGSCG CW FS+V A+EG  K + G+L+ LS Q ++DC  
Sbjct: 115 EKVPDSIDYRKKGYVTPIRNQGSCGSCWAFSSVGALEGQLKKKKGKLVVLSPQNLVDCVK 174

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-S 233
            + GC GG+M +AF Y+  ++G+  E+ YPY   +  C +     +AA  + Y++V   +
Sbjct: 175 KNDGCGGGYMTNAFEYVRDNKGIDSEKAYPYVGEDQECMYNVSG-RAAACKGYKEVQEGN 233

Query: 234 ELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEGPY 290
           E AL+ AV+   PVSV IDA    F++YS GV+        ++NHAV  VGYG+  +  Y
Sbjct: 234 EKALKKAVALVGPVSVGIDAGLSSFQFYSKGVYYDKDCSAEDINHAVLAVGYGTQKKAKY 293

Query: 291 WLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           W++KNSWG+ WG+ G+I M +D G A  CGIA  ASYP+
Sbjct: 294 WIVKNSWGEEWGDKGYILMAKDKGNA--CGIANLASYPV 330


>gi|312381833|gb|EFR27483.1| hypothetical protein AND_05794 [Anopheles darlingi]
          Length = 344

 Score =  227 bits (579), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 130/331 (39%), Positives = 195/331 (58%), Gaps = 38/331 (11%)

Query: 27  ELWMA---QSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTD 80
           E W A   Q  + Y +++E+ +R KI+ +N   I K N+    G + ++L +N++ADL  
Sbjct: 25  EEWNAFKLQHRKKYDSESEERIRMKIYVQNKHKIAKHNQRYDLGQEKFRLRVNKYADLLH 84

Query: 81  EEFIASHTGYKMPTRNISNQSQSYANNWFG-------------YPDSRRGLPRSIDWRAR 127
           EEF+ +  G+        N+S +  +   G                +   +P +IDWR +
Sbjct: 85  EEFVHTLNGF--------NRSAAAGSKLLGREQLMTIEEPITWIEPANVDVPTTIDWREK 136

Query: 128 GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWM 184
           GAVTPVK+QG CG CW FSA  A+EG    +TG+L+SLSEQ ++DCS   G+ GC GG M
Sbjct: 137 GAVTPVKDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSTKYGNNGCNGGLM 196

Query: 185 DDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR 243
           D+AF Y+  ++G+  E+ YPY+  +  C++   A+ A   + + D+P   E AL+ A++ 
Sbjct: 197 DNAFQYVKDNKGIDTEKAYPYEAIDDECHYNPKAIGATD-KGFVDIPQGDEKALKKALAT 255

Query: 244 Q-PVSVAIDASSPGFRYYSGGVFAGP-CGNN-LNHAVTIVGYGSSNEGP-YWLIKNSWGQ 299
             PVSVAIDAS   F++YS GV+  P C +  L+H V  VGYG++ +G  YWL+KNSWG 
Sbjct: 256 VGPVSVAIDASHESFQFYSEGVYYEPQCDSEQLDHGVLAVGYGTTEDGEDYWLVKNSWGT 315

Query: 300 NWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
            WG+ G+++M R+      CGIA  ASYP+ 
Sbjct: 316 TWGDQGYVKMARN--RENHCGIATTASYPLV 344


>gi|19698257|dbj|BAB86771.1| cathepsin L-like [Engraulis japonicus]
          Length = 324

 Score =  227 bits (578), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 140/331 (42%), Positives = 188/331 (56%), Gaps = 24/331 (7%)

Query: 11  LVMSRTLHEDSISAKHEL--WMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNR---EGN 65
           +V +  L   S S   E   W A+  ++Y +  E+A R  ++  N + I+  N+   +G 
Sbjct: 5   IVAAACLAVVSCSLDQEFNEWKAKFGKSYPSLEEEAHRKGLWLANHQKIQAHNQLADQGV 64

Query: 66  QTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWR 125
            +Y+  LN+F+D+  EEF  +      P +N    S+      F  P+   GL  S+DWR
Sbjct: 65  HSYRQGLNQFSDMDHEEFRQTVLTKMDPPKNNRGASEP-----FRAPNV--GLAASVDWR 117

Query: 126 ARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGG 182
             G V+P+KNQG CG CW FSA  A+E  T +R G L SLSEQQ++DCS   G+ GC GG
Sbjct: 118 TSGCVSPIKNQGQCGSCWSFSATGALESQTCLRRGYLPSLSEQQLVDCSGPYGNYGCNGG 177

Query: 183 WMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT--SELALRYA 240
           W D AF Y+  + G+  E  YPYQ R G C++   A  AA    YQDV    SE AL+Y 
Sbjct: 178 WPDHAFQYVQANGGIDSESYYPYQARVGTCHY-NSAYSAATCSGYQDVTPVGSESALQYY 236

Query: 241 VSR-QPVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPYWLIKNSWG 298
           V+   P+S+AIDAS  G++ Y  GVF  P C    +HAV +VGYG+ N   YWL+KNSWG
Sbjct: 237 VANVGPLSIAIDAS--GWQSYQSGVFNDPSCSQTADHAVLLVGYGTYNGQDYWLVKNSWG 294

Query: 299 QNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
             WGE G+I M R+      CGIA  ASYP+
Sbjct: 295 TWWGEQGYIMMARNANNQ--CGIANHASYPL 323


>gi|213623960|gb|AAI70453.1| Hypothetical protein LOC100127265 [Xenopus laevis]
          Length = 331

 Score =  227 bits (578), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 133/339 (39%), Positives = 200/339 (58%), Gaps = 19/339 (5%)

Query: 1   MLIIMVTWASLVMSRT--LHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIE 58
           ML   +    L M RT   H++++ A+ +LW     + Y  Q ++  R  I++KNF+ I 
Sbjct: 1   MLSFCLLALVLPMVRTDLYHDETLDAEWDLWKRTYHKQYNGQMDELQRRLIWEKNFKMIT 60

Query: 59  KFNREGNQ---TYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSR 115
             N E NQ   TY++++N+  D+T EE + + TG K+  RN         N  F +  + 
Sbjct: 61  SHNFEYNQGPHTYEMAMNQLGDMTSEEVVRTMTGLKIHKRNKP------TNLTFEHDKAP 114

Query: 116 RGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDC-S 174
             +P SID+R +G VTP++NQGSCG CW FS+V A+EG  K + G+L+ LS Q ++DC  
Sbjct: 115 EKVPDSIDYRKKGYVTPIRNQGSCGSCWAFSSVGALEGQLKKKKGKLVVLSPQNLVDCVK 174

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-S 233
            + GC GG+M +AF Y+  ++G+  E+ YPY   +  C +     +AA  + Y++V   +
Sbjct: 175 KNDGCGGGYMTNAFEYVRDNKGIDSEKAYPYVGEDQECMYNVSG-RAAACKGYKEVQEGN 233

Query: 234 ELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNEGPY 290
           E AL+ AV+   PVSV IDA    F++YS GV+        ++NHAV  VGYG+  +  Y
Sbjct: 234 EKALKKAVALVGPVSVGIDAGLSSFQFYSKGVYYDKDCSAEDINHAVLAVGYGTQKKAKY 293

Query: 291 WLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           W++KNSWG+ WG+ G+I M +D G A  CGIA  ASYP+
Sbjct: 294 WIVKNSWGEEWGDKGYILMAKDKGNA--CGIANLASYPV 330


>gi|380236892|emb|CBK52289.1| cathepsin S protein [Dicentrarchus labrax]
          Length = 337

 Score =  227 bits (578), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 130/338 (38%), Positives = 185/338 (54%), Gaps = 19/338 (5%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           ML  ++  +  V +  + E  + A  +LW     + Y+ + E   R ++++KN   I   
Sbjct: 9   MLGSLMLVSLCVGAAAMFEPKLDAHWKLWKMTHGKKYQTEVEDVSRRELWEKNLMLITMH 68

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N E   G  TY+LS+N   DLT EE + S      PT +I   +  +A        +   
Sbjct: 69  NLEASMGLHTYELSMNHMGDLTQEEIMQSFATLSPPT-DIQRAASPFAGT------TGAD 121

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           +P ++DWR +G VT VK QGSCG CW FSA  A+EG     TG+L+ LS Q ++DCS   
Sbjct: 122 VPDTMDWREKGCVTSVKMQGSCGSCWAFSAAGALEGQLAKTTGKLVDLSPQNLVDCSTKY 181

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-S 233
           G+ GC GG M  AF Y+I +QG+  +  YPY  R G C +     +AA    Y  +P  +
Sbjct: 182 GNHGCNGGLMHHAFQYVIDNQGIDSDASYPYTGRNGECRYNS-KFRAANCSQYSFLPEGN 240

Query: 234 ELALRYAVSR-QPVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPYW 291
           E AL+ A++   P+SVAIDA+ P F +Y  GV+  P C   +NH V  VGYG+ +   YW
Sbjct: 241 EGALKEALANIGPISVAIDATRPTFTFYRSGVYNDPNCSQKVNHGVLAVGYGTLDGQDYW 300

Query: 292 LIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           L+KNSWG+ +G+ G+IRM R+      CGIA    YPI
Sbjct: 301 LVKNSWGKTFGDQGYIRMSRNKNDQ--CGIALYGCYPI 336


>gi|340381055|ref|XP_003389037.1| PREDICTED: cathepsin L1-like [Amphimedon queenslandica]
          Length = 329

 Score =  227 bits (578), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 133/343 (38%), Positives = 201/343 (58%), Gaps = 32/343 (9%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           + +++  A+L++  T  E   +A+ ELW   + + Y ++ E+  R  I++ N + + + N
Sbjct: 1   MKLLIAVAALIVCATAFE--YTAEWELWKRTNGKDYSSEKEELYRQTIWEANKKIVLEHN 58

Query: 62  REGNQ-TYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPR 120
              ++  + L +N FADL   EF A + GY+   R  SN ++ +         +   LP 
Sbjct: 59  ANADKWGWTLEMNAFADLESSEFAAMYNGYRRSARK-SNATRYHV-------PTGNALPD 110

Query: 121 SIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSR 177
           ++DWR +GAVTPVKNQ  CG CW FS   ++EG T ++ G L SLSEQQ++DCS   G+ 
Sbjct: 111 TVDWRTKGAVTPVKNQKQCGSCWAFSTTGSLEGQTFLKKGTLPSLSEQQLVDCSDKYGNH 170

Query: 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSEL-A 236
           GC GG MD+AF YI  + G+  E  YPY+ + G C +Q+ A+ AA    Y+D+P  ++  
Sbjct: 171 GCQGGLMDNAFKYIEANGGIDSEASYPYEAKNGKCRFQQSAV-AATCTGYKDIPHDDIDG 229

Query: 237 LRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP--CGNN-LNHAVTIVGYGSS------N 286
           L+ AV+   P+SVA+DAS   F+ Y+ GV+  P  C +  L+H V  VGYG+        
Sbjct: 230 LQDAVANVGPISVAMDASHSSFQLYAAGVY-DPLLCSSTRLDHGVLAVGYGTEPSGLFHE 288

Query: 287 EGPYWLIKNSWGQNWGEGGFIRM-RRDVGGAGLCGIARKASYP 328
           E PYWL+KNSWG +WG+ G+ ++ R+D      CGIA  ASYP
Sbjct: 289 EKPYWLVKNSWGPDWGQQGYFKIVRKD----NKCGIATDASYP 327


>gi|217323618|gb|ACK38176.1| midgut cysteine peptidase, partial [Sphenophorus levis]
          Length = 324

 Score =  227 bits (578), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 131/335 (39%), Positives = 184/335 (54%), Gaps = 27/335 (8%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L+++   A+L+    +H  S   KH        +TYKNQAE+  RF IF++N R IE  N
Sbjct: 9   LLVVAVSATLLKEDGVHFQSFKLKH-------GKTYKNQAEETKRFAIFRENLRKIEAHN 61

Query: 62  ---REGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL 118
              ++G  +Y   +N+FAD+T  EF A      M    +  +    A   F   D    +
Sbjct: 62  AEYKQGIHSYTQGINKFADMTRAEFKA------MLATQVKTKPSIVATKTFQLADGV-SV 114

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--S 176
           P SIDWR+R  VTP+K+Q  CG CW F+ V + EG   + TG+L   SEQQ++DC+   +
Sbjct: 115 PESIDWRSRNVVTPIKDQAQCGSCWSFAVVGSTEGAYALSTGKLTRFSEQQLVDCTTDLN 174

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELA 236
            GC GG++DD F Y I++ GL  E  YPY   +G C++    +   ++ SY  VP +E A
Sbjct: 175 YGCDGGYLDDTFPY-IQTNGLELESDYPYTGYDGSCSYDSSKV-VTKVSSYVSVPANEQA 232

Query: 237 LRYAV-SRQPVSVAIDASSPGFRYYSGGVFAGPCGNN-LNHAVTIVGYGSSNEGPYWLIK 294
           L  AV +  PV++AI+A    F Y+SG +    C    L+H V  VGY S N   YWLIK
Sbjct: 233 LLEAVGTAGPVAIAINADDLQF-YFSGIIDDKYCDPEWLDHGVLAVGYNSENGLDYWLIK 291

Query: 295 NSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           NSWG +WGE G+ R  R   G  +CG+   A YP+
Sbjct: 292 NSWGADWGESGYFRFLR---GQNICGVKEDAVYPL 323


>gi|6978723|ref|NP_037288.1| cathepsin L1 preproprotein [Rattus norvegicus]
 gi|55888|emb|CAA68691.1| prepro-cathepsin L [Rattus norvegicus]
          Length = 334

 Score =  227 bits (578), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 127/325 (39%), Positives = 183/325 (56%), Gaps = 26/325 (8%)

Query: 19  EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEF 75
           + + +A+   W +   R Y    E+  R  +++KN R I+  N E   G   + + +N F
Sbjct: 22  DQTFNAQWHQWKSTHRRLYGTNEEEWRR-AVWEKNMRMIQLHNGEYSNGKHGFTMEMNAF 80

Query: 76  ADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKN 135
            D+T+EEF     GY+          +      F  P   + +P+++DWR +G VTPVKN
Sbjct: 81  GDMTNEEFRQIVNGYR--------HQKHKKGRLFQEPLMLQ-IPKTVDWREKGCVTPVKN 131

Query: 136 QGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYII 192
           QG CG CW FSA   +EG   ++TG+LISLSEQ ++DCS   G++GC GG MD AF YI 
Sbjct: 132 QGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIK 191

Query: 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSR-QPVSVAID 251
            + GL  E  YPY+ ++G C + R     A    + D+P  E AL   V+   P+SVA+D
Sbjct: 192 ENGGLDSEESYPYEAKDGSCKY-RAEYAVANDTGFVDIPQQEKALMKPVATVGPISVAMD 250

Query: 252 ASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYG----SSNEGPYWLIKNSWGQNWGEGG 305
           AS P  ++YS G++  P     +L+H V +VGYG     SN+  YWL+KNSWG+ WG  G
Sbjct: 251 ASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDG 310

Query: 306 FIRMRRDVGGAGLCGIARKASYPIA 330
           +I++ +D      CG+A  ASYPI 
Sbjct: 311 YIKIAKDRNNH--CGLATAASYPIV 333


>gi|150261413|pdb|2PNS|A Chain A, 1.9 Angstrom Resolution Crystal Structure Of A Plant
           Cysteine Protease Ervatamin-C Refinement With Cdna
           Derived Amino Acid Sequence
 gi|150261414|pdb|2PNS|B Chain B, 1.9 Angstrom Resolution Crystal Structure Of A Plant
           Cysteine Protease Ervatamin-C Refinement With Cdna
           Derived Amino Acid Sequence
 gi|166007115|pdb|2PRE|A Chain A, Crystal Structure Of Plant Cysteine Protease Ervatamin-C
           Complexed With Irreversible Inhibitor E-64 At 2.7 A
           Resolution
 gi|166007116|pdb|2PRE|B Chain B, Crystal Structure Of Plant Cysteine Protease Ervatamin-C
           Complexed With Irreversible Inhibitor E-64 At 2.7 A
           Resolution
          Length = 208

 Score =  226 bits (577), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 119/213 (55%), Positives = 145/213 (68%), Gaps = 10/213 (4%)

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-GS 176
           LP  IDWR +GAVTPVKNQG CG CW FS V+ VE I +IRTG LISLSEQQ++DC+  +
Sbjct: 1   LPEQIDWRKKGAVTPVKNQGKCGSCWAFSTVSTVESINQIRTGNLISLSEQQLVDCNKKN 60

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSEL 235
            GC GG    A+ YII + G+  E  YPY+  +G C   R A K  RI  Y+ VP  +E 
Sbjct: 61  HGCKGGAFVYAYQYIIDNGGIDTEANYPYKAVQGPC---RAAKKVVRIDGYKGVPHCNEN 117

Query: 236 ALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKN 295
           AL+ AV+ QP  VAIDASS  F++Y  G+F+GPCG  LNH V IVGY       YW+++N
Sbjct: 118 ALKKAVASQPSVVAIDASSKQFQHYKSGIFSGPCGTKLNHGVVIVGYWKD----YWIVRN 173

Query: 296 SWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           SWG+ WGE G+IRM+R VGG GLCGIAR   YP
Sbjct: 174 SWGRYWGEQGYIRMKR-VGGCGLCGIARLPYYP 205


>gi|225709022|gb|ACO10357.1| Cathepsin L precursor [Caligus rogercresseyi]
          Length = 332

 Score =  226 bits (577), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 130/316 (41%), Positives = 181/316 (57%), Gaps = 23/316 (7%)

Query: 27  ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEF 83
           E W     ++Y++  E+ +R KI  +N   I + N E   G  +Y + +N + DL   EF
Sbjct: 28  ESWKLTHGKSYESSIEEKLRLKIHMENSLKISRHNAEAINGKHSYYMKMNHYGDLLHHEF 87

Query: 84  IASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCW 143
           +A   GY+   +       S   ++   P     LP  +DWR  GAVTPVKNQG CG CW
Sbjct: 88  VAMVNGYEYVNKT------SLGGSFI--PSKNVKLPTHVDWREDGAVTPVKNQGQCGSCW 139

Query: 144 IFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDE 200
            FS+  ++EG T  +TG+LI LSEQ ++DCS   G+ GC GG MD AF+YI  ++G+  E
Sbjct: 140 AFSSTGSLEGQTFRKTGKLIPLSEQNLVDCSRKYGNNGCEGGLMDFAFTYIRDNKGIDTE 199

Query: 201 RVYPYQRREGYCNWQRGAMKAARIRSYQDVP--TSELALRYAVSRQPVSVAIDASSPGFR 258
             YPY+   G C++      ++ I  + DV   + E  L+   S  PVSVAIDAS   F+
Sbjct: 200 GSYPYEGVGGRCHYDPSKKGSSDI-GFVDVKKGSEEELLKAVASVGPVSVAIDASHMSFQ 258

Query: 259 YYSGGV-FAGPCG-NNLNHAVTIVGYGSS-NEGP-YWLIKNSWGQNWGEGGFIRMRRDVG 314
           +YS GV F   C   NL+H V +VGYG+  N G  YWL+KNSW +NWG+ G+I+M R+  
Sbjct: 259 FYSHGVYFESKCSPENLDHGVLVVGYGTDENSGEDYWLVKNSWSENWGDQGYIKMARN-- 316

Query: 315 GAGLCGIARKASYPIA 330
              +CGIA  ASYP+ 
Sbjct: 317 KKNMCGIASSASYPVV 332


>gi|260516672|gb|ACX43963.1| cysteine protease 3, partial [Brachiaria hybrid cultivar]
          Length = 319

 Score =  226 bits (577), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 128/303 (42%), Positives = 174/303 (57%), Gaps = 21/303 (6%)

Query: 12  VMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLS 71
           V S  + +D  +A    +M Q ++ Y + AE + RF  FK +   I   N   N +Y + 
Sbjct: 32  VPSEVMLQDMFTA----FMKQYSKAY-SHAEFSSRFNQFKASVETIRLHNTLANASYTMG 86

Query: 72  LNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVT 131
           LNEFADL+ EEF   + G K   R  +      +NN           P SIDWR   AVT
Sbjct: 87  LNEFADLSFEEFKGKYFGCKHVEREFAR-----SNN---LHQEVEAAPTSIDWRTSNAVT 138

Query: 132 PVKNQGSCGCCWIFSAVAAVEGITKIRTGR-LISLSEQQVLDCS---GSRGCYGGWMDDA 187
           P+K+QG CG CW FSA  ++EG   ++    L SLSEQQ++DCS   G+ GC GG MD A
Sbjct: 139 PIKDQGQCGSCWAFSATGSIEGAWVLQGKHTLTSLSEQQLVDCSTSYGNAGCNGGLMDYA 198

Query: 188 FSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELA--LRYAVSRQP 245
           F YII ++G+  E  YPY+   G C  Q+   K   I  ++DV + + A  L    +  P
Sbjct: 199 FEYIIANKGICAESAYPYKGVGGLC--QKSCTKVVTISGHKDVASGDEASSLNAVGTVGP 256

Query: 246 VSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGG 305
           VSVAI+A   GF++YS GVF+G CG+NL+H V  VGYG++    YW++KNSWG +WGE G
Sbjct: 257 VSVAIEADQAGFQFYSSGVFSGTCGHNLDHGVLAVGYGTTGSQDYWIVKNSWGTSWGESG 316

Query: 306 FIR 308
           +IR
Sbjct: 317 YIR 319


>gi|256082975|ref|XP_002577726.1| subfamily C1A unassigned peptidase (C01 family) [Schistosoma
           mansoni]
          Length = 1471

 Score =  226 bits (577), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 131/326 (40%), Positives = 182/326 (55%), Gaps = 26/326 (7%)

Query: 20  DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN---REGNQTYKLSLNEFA 76
           D I A  + +  Q  R Y    E+  RF IF  NF  + + N   +EG  TYK+ +NEF 
Sbjct: 54  DDIIAAWKFFKIQFKRAYNGIHEETRRFFIFSANFVKMMEHNHAFQEGKVTYKMGVNEFT 113

Query: 77  DLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQ 136
           D TD E +    GYK+ +  I ++  ++  +          LP  +DWR  GAVT VKNQ
Sbjct: 114 DKTDYE-LKKLRGYKVTSGAIRHKGSTFIRS------EHTKLPSKVDWRREGAVTDVKNQ 166

Query: 137 GSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIR 193
           G CG CW FS   A+EG    +T RL++LSEQQ++DCS   G+ GC GG M+ AF Y+  
Sbjct: 167 GQCGSCWAFSTTGAIEGQHYRKTNRLVNLSEQQLVDCSKSYGNNGCSGGLMNSAFEYVRD 226

Query: 194 SQGLTDERVYPYQRREGYCNWQRGAMKA----ARIRSYQDV-PTSELALRYAV-SRQPVS 247
           ++G+  E  YPY   +G  N  R    A    A++  Y ++    E AL  AV ++ PVS
Sbjct: 227 NEGIDSEISYPYVSGDGTEN-NRCLFNASNILAQVTGYVNIHEGDERALMDAVATKGPVS 285

Query: 248 VAIDASSPGFRYYSGGVFAGP-CG---NNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGE 303
           VAI+A  P F  Y  G+++   C    + L+H V +VGYG  N   YWLIKNSWG+ WGE
Sbjct: 286 VAINAGLPSFSMYKSGIYSDTDCEGTLDALDHGVLVVGYGEENGRSYWLIKNSWGEEWGE 345

Query: 304 GGFIRMRRDVGGAGLCGIARKASYPI 329
            G+I++ +  G   +CG+A  ASYP+
Sbjct: 346 KGYIKISK--GSHNMCGVASAASYPL 369


>gi|328909405|gb|AEB61370.1| cathepsin S-like protein, partial [Equus caballus]
          Length = 281

 Score =  226 bits (577), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 126/293 (43%), Positives = 176/293 (60%), Gaps = 27/293 (9%)

Query: 49  IFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT---RNISNQSQ 102
           I+++N +F+   N E   G  +Y L +N   D+T EE  +  +  ++P+   RN++ +S 
Sbjct: 1   IWERNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVTSLMSSLRVPSQWQRNVTYKSN 60

Query: 103 SYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRL 162
                    P+ +  LP S+DWR +G VT VK QGSCG CW FSAV A+E   K++TG L
Sbjct: 61  ---------PNEK--LPDSLDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGNL 109

Query: 163 ISLSEQQVLDCS----GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGA 218
           +SLS Q ++DCS     ++GC GG+M  AF YII + G+  +  YPY+  +G C +    
Sbjct: 110 VSLSAQNLVDCSTEKYSNKGCNGGFMTAAFQYIIDNNGIDSDASYPYKAMDGKCRYDS-K 168

Query: 219 MKAARIRSYQDVP-TSELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNH 275
            +AA    Y ++P  SE  L+ AV+ + PVSVAIDAS P F  Y  GV+  P C  N+NH
Sbjct: 169 NRAATCSKYTELPFGSEDDLKEAVANKGPVSVAIDASHPSFFLYKSGVYYDPSCTQNVNH 228

Query: 276 AVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
            V +VGYG+ N   YWL+KNSWG N+G+ G+IRM R+ G    CGIA   SYP
Sbjct: 229 GVLVVGYGNLNGKDYWLVKNSWGINFGDKGYIRMARNSGNH--CGIANYCSYP 279


>gi|332260024|ref|XP_003279085.1| PREDICTED: cathepsin L1 isoform 3 [Nomascus leucogenys]
 gi|441593306|ref|XP_004087072.1| PREDICTED: cathepsin L1 [Nomascus leucogenys]
 gi|441593309|ref|XP_004087073.1| PREDICTED: cathepsin L1 [Nomascus leucogenys]
          Length = 333

 Score =  226 bits (577), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 133/342 (38%), Positives = 187/342 (54%), Gaps = 31/342 (9%)

Query: 3   IIMVTWASLVMSRTLHED-SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           +I+  +   + S TL  D S+ A+   W A   R Y    E+  R  +++KN + IE+ N
Sbjct: 5   LILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIEQHN 63

Query: 62  ---REGNQTYKLSLNEFADLTDEEFIASHTGY--KMPTRNISNQSQSYANNWFGYPDSRR 116
              REG  ++ +++N F D+T EEF     G+  + P +    Q   +            
Sbjct: 64  QEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYE---------- 113

Query: 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-- 174
             PRS+DWR +G VTPVKNQG CG CW FSA  A+EG    +TG+L+SLSEQ ++DCS  
Sbjct: 114 -APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGP 172

Query: 175 -GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTS 233
            G+ GC GG MD AF Y+  + GL  E  YPY+  E  C +       A    + D+P  
Sbjct: 173 QGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNP-KYSVANDTGFVDIPKQ 231

Query: 234 ELALRYAVSR-QPVSVAIDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYG----SSN 286
           E AL  AV+   P+SVA+DA    F++Y  G++  P     +++H V +VGYG     S+
Sbjct: 232 EKALMKAVATVGPISVAVDAGHQSFQFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESD 291

Query: 287 EGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
              YWL+KNSWG+ WG GG+I+M +D      CGIA  ASYP
Sbjct: 292 NNKYWLVKNSWGEEWGMGGYIKMAKDR--RNHCGIASAASYP 331


>gi|19698255|dbj|BAB86770.1| cathepsin L-like [Engraulis japonicus]
          Length = 324

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/319 (42%), Positives = 182/319 (57%), Gaps = 22/319 (6%)

Query: 21  SISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNR---EGNQTYKLSLNEFAD 77
           S+  +   W A+  ++Y +  ++A R  ++  N + I+  N+   +G  +Y+  LN+F+D
Sbjct: 17  SLDQEFNEWKAKFGKSYPSLEKEAHRKGLWLANHQKIQAHNQLADQGVHSYRQGLNQFSD 76

Query: 78  LTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQG 137
           +  EEF  +      P +N    S+ +            GL  S+DWR  G V+P+KNQG
Sbjct: 77  MDHEEFRQTVLTKMDPPKNNRGASEPFR-------ALNVGLAASVDWRTSGCVSPIKNQG 129

Query: 138 SCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---RGCYGGWMDDAFSYIIRS 194
            CG CW FSA  A+E  T +R G L SLSEQQ++DCSGS    GC GGW D AF YI  +
Sbjct: 130 QCGSCWSFSATGALESQTCLRRGYLPSLSEQQLVDCSGSYGNYGCNGGWPDQAFQYIQAN 189

Query: 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT--SELALRYAVSR-QPVSVAID 251
            G+  E  YPYQ R G C++   A  AA    YQDV    SE AL+Y V+   P+S+AID
Sbjct: 190 GGIDSESYYPYQARVGTCHY-NSAYSAATCSGYQDVTPVGSESALQYYVANVGPLSIAID 248

Query: 252 ASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMR 310
           AS  G++ Y  GVF  P C    +HAV +VGYG+ N   YWL+KNSWG  WGE G+I M 
Sbjct: 249 AS--GWQSYQSGVFNDPSCSQTADHAVLLVGYGTYNGQDYWLVKNSWGTWWGEQGYIMMT 306

Query: 311 RDVGGAGLCGIARKASYPI 329
           R+      CGIA  ASYP+
Sbjct: 307 RNANNQ--CGIANHASYPL 323


>gi|413953051|gb|AFW85700.1| hypothetical protein ZEAMMB73_033873 [Zea mays]
          Length = 359

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 141/355 (39%), Positives = 201/355 (56%), Gaps = 32/355 (9%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISA-----KHELWMAQSARTYKNQAEKAMRFKIFKKNFR 55
           + ++M+   SL+++ T   D   A     + + W A+  RTY    E   RF ++ +N R
Sbjct: 10  LALVMLFACSLLLAGTAFSDDTIAIPLLERFKAWQAEYNRTYATPEEFQQRFMVYSENLR 69

Query: 56  FIEKFNR-EGNQTYKLSLNEFADLTDEEFIASH---------TGYKMPTRNISNQSQSYA 105
           FI+  N+     +Y+L  N+F DLT+EEF  ++             MP    +  +   +
Sbjct: 70  FIKTMNQLSTGSSYELGENQFTDLTEEEFKDTYLMKLDEQPPAAEAMPPIVGTMSTAGMS 129

Query: 106 NNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISL 165
           N      D+    P S+DWR +GAVTPVKNQ  CG CW F+ VA++EG+ +I+TGRL+SL
Sbjct: 130 NG-----DNTGEAPNSVDWRTKGAVTPVKNQQQCGSCWAFATVASIEGVHQIKTGRLVSL 184

Query: 166 SEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAA 222
           SEQ+++DC       GC GG+   A  ++ R+ GLT E  YPY   +  C   +    AA
Sbjct: 185 SEQEIVDCDRGGNDHGCRGGYPRSAMEWVTRNGGLTTESDYPYVGSQRQCMSGKLGHHAA 244

Query: 223 RIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCG-NNLNHAVTIV 280
           RIR YQ V   +E  L  AV+ +PV+V IDAS   F++Y  GVF+GPC    +NHAVT+V
Sbjct: 245 RIRGYQAVQRKNEAELERAVAGRPVAVVIDASR-AFQFYKRGVFSGPCNTTTVNHAVTVV 303

Query: 281 GYGSSNEG-----PYWLIKNSWGQNWGEGGFIRMRRDVGGA-GLCGIARKASYPI 329
           GYGS+         YW++KNSWGQ WGE G++RM R V    G+C IA +  YP+
Sbjct: 304 GYGSAGSDSGGGRKYWIVKNSWGQRWGENGYVRMARRVRAREGMCAIAIEPYYPV 358


>gi|148224682|ref|NP_001086670.1| cathepsin S [Xenopus laevis]
 gi|50418223|gb|AAH77285.1| Ctss-prov protein [Xenopus laevis]
          Length = 320

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 118/311 (37%), Positives = 180/311 (57%), Gaps = 18/311 (5%)

Query: 28  LWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFI 84
           LW  +  + Y++++E  +R   ++KN   +   N E   G  TY+L +N  AD+T EE  
Sbjct: 16  LWKNKHTKEYEDESEDLLRRITWEKNLNTVNMHNLEYSMGMHTYELGMNHLADMTSEEIK 75

Query: 85  ASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG--LPRSIDWRARGAVTPVKNQGSCGCC 142
           +  TG  +P  +    + S   N      S  G  +P SIDWR +G V+ VKNQG CG C
Sbjct: 76  SKMTGLILPPHSERKATFSSQKN------STLGGKVPDSIDWREKGCVSEVKNQGGCGSC 129

Query: 143 WIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTD 199
           W FSAV A+EG   ++TG+++SLS Q ++DCS   G++GC GG+M  AF Y+I + G+  
Sbjct: 130 WAFSAVGALEGQLMLKTGKIVSLSPQNLVDCSSKYGNKGCSGGFMTRAFQYVIDNNGIDS 189

Query: 200 ERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSR-QPVSVAIDASSPGFR 258
           +  YPY   +  C+++     ++ ++  + VP +E  L+ A+    P+SVAID + P F 
Sbjct: 190 DTYYPYHAMDEKCHYELAGKASSCVKYREIVPGTEDNLKQALGNIGPISVAIDGTRPTFF 249

Query: 259 YYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAG 317
            Y  GV++ P C   +NH V  VGYG+ N   +WL+KNSWG  +G+ G++R+ R+     
Sbjct: 250 LYKSGVYSDPSCSQEVNHGVLAVGYGTLNGQDFWLLKNSWGTKYGDQGYVRIARN--KEN 307

Query: 318 LCGIARKASYP 328
           LCG+A   SYP
Sbjct: 308 LCGVASYTSYP 318


>gi|291383488|ref|XP_002708302.1| PREDICTED: cathepsin L1 [Oryctolagus cuniculus]
          Length = 344

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/341 (38%), Positives = 192/341 (56%), Gaps = 26/341 (7%)

Query: 2   LIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           L + V  + ++ +    + S+  +   W+A   R Y  + E+  R  +++KN + IEK N
Sbjct: 5   LFLAVLCSGMISAAPTPDHSLDTRWRQWLAAHKRRYGVREEEWRR-AVWEKNMQMIEKHN 63

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL 118
           RE   G   + +++N + D+T+EEF     G++   +N     + + +  F        +
Sbjct: 64  REYSQGKHGFTMAMNAYGDMTNEEFRLMMNGFE--NQNHKRGEEFHNSLLFK-------I 114

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---G 175
           P  +DWR RG VTPVKNQ  CG  W FSA  A+EG    +TGRL+SLSEQ ++DCS   G
Sbjct: 115 PAFLDWRERGYVTPVKNQELCGSSWAFSATGALEGQMFRKTGRLVSLSEQNLVDCSWPQG 174

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSEL 235
           ++GC GG MD AF Y+  ++GL  E  YPY++R+G C +      AA +  + DV   E 
Sbjct: 175 NQGCSGGLMDYAFQYVKDNRGLDSEESYPYEQRKGSCKYNP-RFSAANVTGFVDVSKDEK 233

Query: 236 ALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYG----SSNEG 288
           AL  AV+   PVSV I  +   F +Y GG++  P     N+NHAV +VGYG     S   
Sbjct: 234 ALMEAVATVGPVSVGIATTPESFLFYEGGIYYDPKCSSENVNHAVLVVGYGFEEVGSKNN 293

Query: 289 PYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
            YWLIKNSWG++WG GG+++M +D      CGIA  ASYP+
Sbjct: 294 KYWLIKNSWGKDWGMGGYMKMAKDQNNH--CGIATAASYPL 332


>gi|391328505|ref|XP_003738729.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 323

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/316 (41%), Positives = 181/316 (57%), Gaps = 20/316 (6%)

Query: 23  SAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLT 79
           SA  +L+     ++Y +  E+  R ++F K+   I   N     G  TY++ LN+F D+T
Sbjct: 16  SANWDLYKKVHGKSYGHD-EEHFRRQLFYKSVAKINAHNLRHDLGLTTYRMGLNKFTDMT 74

Query: 80  DEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSC 139
            EEF  +  G K            +     G       LP  +DWR +G VTPVKNQG C
Sbjct: 75  SEEF-RNFKGLKFDATKTKRNGTRFQKELLG-----EALPTQVDWREKGYVTPVKNQGQC 128

Query: 140 GCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQG 196
           G CW FS   ++EG     TG+L+SLSEQ ++DCS   G+ GC GG MD+ F+YI ++ G
Sbjct: 129 GSCWAFSTTGSLEGQHFKATGKLVSLSEQNLVDCSRVEGNNGCNGGLMDNGFTYIQQNGG 188

Query: 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-SELALRYAV-SRQPVSVAIDASS 254
           +  E  YPY  ++G C +   ++  AR++ + DVP   E AL+ AV S  PVSVAIDAS+
Sbjct: 189 IDTEESYPYTGKDGDCAFNENSV-GARVKGFVDVPQRDEAALQAAVASVGPVSVAIDASN 247

Query: 255 PGFRYYSGGVFAGP-CG-NNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRD 312
             F+YY  GV+  P C  + L+H V +VGYG+ N   YWL+KNSWG  WG+ G+I+M R+
Sbjct: 248 DSFQYYKEGVYDEPSCSFSQLDHGVLVVGYGTENGVDYWLVKNSWGPTWGQDGYIKMMRN 307

Query: 313 VGGAGLCGIARKASYP 328
                 CGIA  ASYP
Sbjct: 308 --KENQCGIASMASYP 321


>gi|195379496|ref|XP_002048514.1| GJ14012 [Drosophila virilis]
 gi|194155672|gb|EDW70856.1| GJ14012 [Drosophila virilis]
          Length = 327

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/337 (38%), Positives = 202/337 (59%), Gaps = 22/337 (6%)

Query: 2   LIIMVTWASLVMSRTL-HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           + +++  A +  +R L +ED ++++ E +  +  ++Y++  E+ +R +IFK N + I++ 
Sbjct: 4   VALLLIVAGVGCNRALSYEDVLASEFESFKVEYEKSYEDDGEEQLRMQIFKDNKQLIDRH 63

Query: 61  NRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N     G +TY++ +N+F D+   EF        +   NIS+ + S     + Y  +   
Sbjct: 64  NERYAAGEETYEMGVNQFTDMLATEF----RKIMLVNLNISDFTSSIE---YIYSPANAE 116

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           +P  +DWR +GAVTPVKNQG CG CW FSA  A+EG   I+T +LI LSEQ +LDCS   
Sbjct: 117 IPSQVDWREKGAVTPVKNQGRCGSCWAFSAAGALEGQHFIQTKQLIPLSEQNLLDCSSRY 176

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSE 234
            + GC GGW   A  Y+  ++G+ ++R YPY+   G C ++R ++ A   +  Q V   E
Sbjct: 177 NNHGCGGGWPAAALMYVRDNRGMDNDRAYPYEGHVGRCRFRRYSVSATVTQVMQ-VRRDE 235

Query: 235 LALRYAV-SRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNE-GPYWL 292
           +AL  AV ++ PVSVA+DA+   F++Y GGV++  C    NHA+ +VGYGS    G +WL
Sbjct: 236 VALANAVATKGPVSVAVDATY--FQHYRGGVYSHRCRQQANHAMLVVGYGSDQRGGDFWL 293

Query: 293 IKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329
           IKNSWG  WGE G++R+ R+ G   LC +A  A +PI
Sbjct: 294 IKNSWG-GWGEQGYMRLARNQG--NLCHVASYAVFPI 327


>gi|242046760|ref|XP_002461126.1| hypothetical protein SORBIDRAFT_02g041240 [Sorghum bicolor]
 gi|241924503|gb|EER97647.1| hypothetical protein SORBIDRAFT_02g041240 [Sorghum bicolor]
          Length = 363

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/305 (43%), Positives = 183/305 (60%), Gaps = 17/305 (5%)

Query: 39  NQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIAS-HTGYKMP-TRN 96
           +  EK  RF  FK+N R I +FN+  ++ YKL LN+F+DLTDEEF +  +TG  +  T N
Sbjct: 59  DHVEKPSRFDTFKENARHINEFNKREDEPYKLGLNQFSDLTDEEFDSGMYTGALLEDTGN 118

Query: 97  ISNQS---QSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEG 153
           +S  S       ++      + + +P   DWR  GAVTPVKNQ  CG CW F  V AVEG
Sbjct: 119 VSLSSGMIDDDDDDELLASAANKKVPCKWDWRRHGAVTPVKNQKKCGSCWAFGMVGAVEG 178

Query: 154 ITKIRTGRLISLSEQQVLDCSGSRGCYGGWMDDAFSYIIRSQGLTDERVYP-------YQ 206
           I  I+TG+L SLSEQ+VLDCSG+  C GG    AF +  R     D + +P        +
Sbjct: 179 INAIKTGKLKSLSEQEVLDCSGAGTCKGGDPYKAFDHAKRPGLALDHQGHPPYYPAYVAE 238

Query: 207 RREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFA 266
           +++   N ++  +K    R  +D  T+E  L+  V +QPV++ I+A+   F  YS GVF 
Sbjct: 239 KKKCRFNPRKHVVKIDGKRMMRD--TTEAKLKCRVYKQPVAILIEANH-AFSRYSKGVFT 295

Query: 267 GPCGNNLNHAVTIVGYGSSNEG-PYWLIKNSWGQNWGEGGFIRMRRDV-GGAGLCGIARK 324
           GPCG  LNH V +VGYG++  G  YW++KNSWG+ WGE G+IRM+R+V   AGLCG+  +
Sbjct: 296 GPCGTRLNHVVVVVGYGTTTNGIDYWIVKNSWGKGWGENGYIRMKRNVRSKAGLCGMYMR 355

Query: 325 ASYPI 329
             YPI
Sbjct: 356 PMYPI 360


>gi|156717488|ref|NP_001096284.1| uncharacterized protein LOC100124852 precursor [Xenopus (Silurana)
           tropicalis]
 gi|134026063|gb|AAI35549.1| LOC100124852 protein [Xenopus (Silurana) tropicalis]
          Length = 333

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/336 (39%), Positives = 188/336 (55%), Gaps = 20/336 (5%)

Query: 3   IIMVTWASLVMSRTLHEDSISAKH-ELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFN 61
           I +V   SL++      D     H +LW+    +TYKN  E+  R  I+++  +FI   N
Sbjct: 6   ICLVALLSLLIPAHSAPDPTLDTHWQLWVKTHQKTYKNAEEERARRTIWEETLKFISAHN 65

Query: 62  RE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGL 118
            E   G  TY++ +N   D+T EE  A+ TGY      ++N +++        P      
Sbjct: 66  LEYSLGLHTYEVGMNHLGDMTGEEVAATMTGYTGSRNTLANITEAPKEILEAQP------ 119

Query: 119 PRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS---G 175
           P SIDWR +G VTPVKNQGSC C + F+AV A+E   KI+TG L + S QQ++DCS   G
Sbjct: 120 PASIDWRTKGCVTPVKNQGSCRCDYAFAAVGALECQWKIKTGSLFTFSPQQLVDCSYTEG 179

Query: 176 SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSE- 234
           + GCYGG++  +F+Y ++  GL  E  YPY+ +EG C  ++       ++ +  +P+   
Sbjct: 180 NNGCYGGYIMYSFTY-MKKYGLMQEPAYPYEGKEGKCT-KKKPSNTGVVKQFYRIPSGNG 237

Query: 235 LALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPYWL 292
            AL  AV R  PVSV IDA   GFR Y  GV+  P C  + NH V IVGYG++    YWL
Sbjct: 238 NALMKAVGRVGPVSVWIDAGQQGFRMYKSGVYYDPQCTTHTNHVVLIVGYGTAKGSKYWL 297

Query: 293 IKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           +KNSWG+ +G  G+I+M R+      CGI  +A YP
Sbjct: 298 VKNSWGKGYGHKGYIKMARNYDKD--CGITLRAVYP 331


>gi|428186189|gb|EKX55040.1| hypothetical protein GUITHDRAFT_63227 [Guillardia theta CCMP2712]
          Length = 344

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/312 (44%), Positives = 181/312 (58%), Gaps = 39/312 (12%)

Query: 42  EKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIASHTGY------KM 92
           E    F++F+KN   I K N E   G Q+Y++ LN FA LT EEF A + GY      + 
Sbjct: 47  ESTRAFEVFQKNLDMIMKHNEEYNQGLQSYEMGLNGFAHLTFEEFSAQYLGYGGAEVEQP 106

Query: 93  PTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVE 152
            TR      +           SR  +P S+DWR +GAV  VKNQG+CG CW FSAVAA+E
Sbjct: 107 KTRRAGKHERK----------SRSEIPASVDWREKGAVAEVKNQGACGSCWAFSAVAALE 156

Query: 153 GITKIRTGRLISLSEQQVLDCS---GSRGCYGGWMDDAFSYIIRSQGLTD--ERVYPYQR 207
           G   + +G LISLSEQQ++DCS   G+ GC GG+MD+AF Y + + G  D  E+ YPY+ 
Sbjct: 157 GAHFLNSGELISLSEQQLVDCSKKFGNHGCAGGYMDNAFEYWMNNTGHGDDSEKDYPYKG 216

Query: 208 REGYCNWQRGAMKAARIRSYQDVPT-SELALRYAVSR-QPVSVAIDASSPGFRYYSGGVF 265
            +G C +    ++A  I  Y DV   +E  L  AV+   PVSVAI A +   ++Y  GVF
Sbjct: 217 MDGKCKFSADGVRAT-ISGYNDVKQGNETDLLDAVANVGPVSVAIHAGAA-LQFYLRGVF 274

Query: 266 ---AGPCGNNLNHAVTIVGYGSSN-----EGPYWLIKNSWGQNWGEGGFIRMRRDVGGAG 317
              AG C   LNH VT VGYG+++     +  YW+IKNSWG  WGE GF+R  R   G  
Sbjct: 275 NGVAGTCFGPLNHGVTAVGYGTASLRFGRKMDYWIIKNSWGMGWGEKGFVRFAR---GKN 331

Query: 318 LCGIARKASYPI 329
           LCG+A  ASYP+
Sbjct: 332 LCGVANGASYPL 343


>gi|52630917|gb|AAU84922.1| putative cathepsin L [Toxoptera citricida]
          Length = 341

 Score =  226 bits (575), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/341 (39%), Positives = 195/341 (57%), Gaps = 16/341 (4%)

Query: 1   MLIIMVTWASLVMSRTLHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKF 60
           +L ++V   S V S  L+E  I  + +L+  Q  + Y++  E+A R K++  N   I + 
Sbjct: 6   VLGLVVFAISSVSSINLNE-IIEEEWDLFKVQFKKIYEDVKEEAFRKKVYLDNKLKIARH 64

Query: 61  NR---EGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRG 117
           N+    G +TY L +N F DL   E+     G+K P+    +++ +  +           
Sbjct: 65  NKLYETGEETYALEMNHFGDLMQHEYTKMMNGFK-PSLAGGDKNFTDDDAVTFLKSENVV 123

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS--- 174
           +P+SIDWR +G VTPVKNQG CG CW FSA  ++EG    +TG L+SLSEQ ++DCS   
Sbjct: 124 IPKSIDWRKKGYVTPVKNQGQCGSCWSFSATGSLEGQHFRKTGVLVSLSEQNLIDCSRKY 183

Query: 175 GSRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPT-S 233
           G+ GC GG MD AF YI  ++GL  E+ YPY+  +  C +       A  + + D+P   
Sbjct: 184 GNNGCEGGLMDLAFKYIKSNKGLDTEKSYPYEAEDDKCRYNP-ENSGATDKGFVDIPEGD 242

Query: 234 ELALRYAVSRQ-PVSVAIDASSPGFRYYSGGVFAGP--CGNNLNHAVTIVGYGSSNE-GP 289
           E AL +A++   PVS+AIDASS  F++Y  GVF  P      L+H V  VGYG+ ++ G 
Sbjct: 243 EDALVHALATVGPVSIAIDASSEKFQFYKKGVFYNPRCSSTELDHGVLAVGYGTDHKGGD 302

Query: 290 YWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330
           YW++KNSWG+ WG+ G+I M R+      CG+A  ASYP+ 
Sbjct: 303 YWIVKNSWGKTWGDQGYIMMARNKKNN--CGVASSASYPLV 341


>gi|46576373|sp|P83654.1|ERVC_TABDI RecName: Full=Ervatamin-C; Short=ERV-C
 gi|46014979|pdb|1O0E|A Chain A, 1.9 Angstrom Crystal Structure Of A Plant Cysteine
           Protease Ervatamin C
 gi|46014980|pdb|1O0E|B Chain B, 1.9 Angstrom Crystal Structure Of A Plant Cysteine
           Protease Ervatamin C
          Length = 208

 Score =  226 bits (575), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 118/213 (55%), Positives = 145/213 (68%), Gaps = 10/213 (4%)

Query: 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-GS 176
           LP  IDWR +GAVTPVKNQGSCG CW FS V+ VE I +IRTG LISLSEQ+++DC   +
Sbjct: 1   LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKKN 60

Query: 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSEL 235
            GC GG    A+ YII + G+  +  YPY+  +G C   + A K   I  Y  VP  +E 
Sbjct: 61  HGCLGGAFVFAYQYIINNGGIDTQANYPYKAVQGPC---QAASKVVSIDGYNGVPFCNEX 117

Query: 236 ALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKN 295
           AL+ AV+ QP +VAIDASS  F+ YS G+F+GPCG  LNH VTIVGY    +  YW+++N
Sbjct: 118 ALKQAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGTKLNHGVTIVGY----QANYWIVRN 173

Query: 296 SWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328
           SWG+ WGE G+IRM R VGG GLCGIAR   YP
Sbjct: 174 SWGRYWGEKGYIRMLR-VGGCGLCGIARLPYYP 205


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.320    0.134    0.426 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,346,593,761
Number of Sequences: 23463169
Number of extensions: 225525535
Number of successful extensions: 495747
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6343
Number of HSP's successfully gapped in prelim test: 1092
Number of HSP's that attempted gapping in prelim test: 466730
Number of HSP's gapped (non-prelim): 9145
length of query: 330
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 188
effective length of database: 9,027,425,369
effective search space: 1697155969372
effective search space used: 1697155969372
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)