Query 037516
Match_columns 330
No_of_seqs 306 out of 1767
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 22:38:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037516.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037516hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tnx_A Papain; hydrolase, cyto 100.0 1.9E-88 6.6E-93 635.9 32.9 308 12-330 51-362 (363)
2 3qj3_A Cathepsin L-like protei 100.0 5.1E-87 1.8E-91 622.8 31.6 304 17-330 13-331 (331)
3 1pci_A Procaricain; zymogen, h 100.0 6.4E-87 2.2E-91 620.3 32.0 304 19-330 15-321 (322)
4 3qt4_A Cathepsin-L-like midgut 100.0 3.8E-86 1.3E-90 615.5 30.3 301 18-330 19-329 (329)
5 1by8_A Protein (procathepsin K 100.0 1.1E-85 3.9E-90 610.3 30.6 303 19-330 4-314 (314)
6 2c0y_A Procathepsin S; proenzy 100.0 1E-85 3.4E-90 610.9 28.5 301 19-330 5-315 (315)
7 1cs8_A Human procathepsin L; p 100.0 4.2E-85 1.4E-89 607.0 28.2 298 20-330 6-316 (316)
8 2o6x_A Procathepsin L1, secret 100.0 4.3E-84 1.5E-88 598.7 27.0 293 24-330 3-306 (310)
9 1xkg_A DER P I, major mite fec 100.0 2.2E-80 7.4E-85 573.3 23.6 285 25-330 7-302 (312)
10 3pdf_A Cathepsin C, dipeptidyl 100.0 8.4E-73 2.9E-77 542.9 22.1 276 41-328 135-433 (441)
11 3hhi_A Cathepsin B-like cystei 100.0 4.6E-72 1.6E-76 520.8 16.5 274 44-329 2-311 (325)
12 1cqd_A Protein (protease II); 100.0 9.3E-68 3.2E-72 468.1 22.4 213 117-330 2-217 (221)
13 3p5u_A Actinidin; SAD, cystein 100.0 6.4E-68 2.2E-72 469.1 20.7 213 118-330 1-217 (220)
14 1ppo_A Protease omega; hydrola 100.0 9.9E-68 3.4E-72 466.4 21.6 212 118-330 1-215 (216)
15 1yal_A Chymopapain; hydrolase, 100.0 2E-67 6.7E-72 465.1 21.7 212 118-330 1-215 (218)
16 3pbh_A Procathepsin B; thiol p 100.0 1E-67 3.6E-72 490.5 20.5 259 53-328 11-312 (317)
17 1iwd_A Ervatamin B; cysteine p 100.0 2.4E-67 8.1E-72 463.5 21.5 211 118-330 1-214 (215)
18 3kwz_A Cathepsin K; enzyme inh 100.0 5E-67 1.7E-71 462.0 21.1 210 118-330 1-215 (215)
19 1s4v_A Cysteine endopeptidase; 100.0 7.2E-67 2.5E-71 464.7 20.6 214 117-330 1-219 (229)
20 2cio_A Papain; hydrolase/inhib 100.0 2E-66 7E-71 456.7 22.6 208 118-330 1-211 (212)
21 3u8e_A Papain-like cysteine pr 100.0 4.9E-67 1.7E-71 464.0 18.2 211 118-330 1-219 (222)
22 3ovx_A Cathepsin S; hydrolase, 100.0 8.8E-67 3E-71 461.4 19.7 210 118-330 2-218 (218)
23 2fo5_A Cysteine proteinase EP- 100.0 7.7E-67 2.6E-71 471.8 19.2 214 117-330 3-224 (262)
24 3ioq_A CMS1MS2; caricaceae, cy 100.0 2E-66 6.9E-71 457.2 20.0 208 118-330 1-211 (213)
25 2bdz_A Mexicain; cysteine prot 100.0 4.3E-66 1.5E-70 455.2 21.6 208 118-330 1-211 (214)
26 2xu3_A Cathepsin L1; hydrolase 100.0 4E-66 1.4E-70 457.6 20.8 210 118-330 1-220 (220)
27 1o0e_A Ervatamin C; plant cyst 100.0 6.7E-66 2.3E-70 452.0 21.3 205 118-330 1-207 (208)
28 3i06_A Cruzipain; autocatalyti 100.0 1.4E-65 4.8E-70 452.5 22.1 207 118-330 1-214 (215)
29 2b1m_A SPE31; papain-like, sug 100.0 1.8E-65 6.3E-70 460.0 22.9 211 117-330 1-224 (246)
30 1m6d_A Cathepsin F, catsf; pap 100.0 1.1E-65 3.7E-70 452.8 20.5 207 118-330 1-213 (214)
31 3f75_A Toxopain-2, cathepsin L 100.0 3.4E-66 1.2E-70 459.5 17.1 213 117-330 6-224 (224)
32 2oul_A Falcipain 2; cysteine p 100.0 1.7E-65 5.8E-70 459.2 20.1 210 117-330 17-240 (241)
33 8pch_A Cathepsin H; hydrolase, 100.0 1.3E-65 4.4E-70 454.5 17.7 207 118-329 1-217 (220)
34 3bwk_A Cysteine protease falci 100.0 2.7E-65 9.1E-70 458.5 19.3 210 117-330 19-242 (243)
35 3f5v_A DER P 1 allergen; aller 100.0 1.8E-65 6E-70 454.2 17.0 210 115-330 7-222 (222)
36 1deu_A Procathepsin X; cystein 100.0 1.7E-60 5.7E-65 434.7 18.3 210 117-329 35-274 (277)
37 3cbj_A Cathepsin B; cathepsin 100.0 1.7E-60 5.7E-65 433.0 17.9 208 117-329 6-256 (266)
38 3qsd_A Cathepsin B-like peptid 100.0 2.5E-60 8.4E-65 429.2 18.0 207 117-328 2-251 (254)
39 2wbf_X Serine-repeat antigen p 100.0 1.1E-54 3.7E-59 394.9 19.9 206 120-329 9-260 (265)
40 3ois_A Cysteine protease; alph 100.0 3E-53 1E-57 389.9 10.0 230 68-313 14-273 (291)
41 2cb5_A Protein (bleomycin hydr 100.0 1.6E-41 5.6E-46 324.0 13.7 193 117-312 47-412 (453)
42 2e01_A Cysteine proteinase 1; 100.0 8.7E-41 3E-45 319.3 17.5 192 118-312 53-413 (457)
43 3pw3_A Aminopeptidase C; bleom 100.0 2.2E-35 7.4E-40 276.3 16.2 180 130-312 22-356 (383)
44 3f75_P Toxopain-2, cathepsin L 99.8 8E-20 2.7E-24 141.0 9.8 75 18-93 17-91 (106)
45 2l95_A Crammer, LP06209P; cyst 99.8 5.7E-19 2E-23 130.2 6.4 68 23-92 7-77 (80)
46 1pxv_A Cysteine protease; hydr 97.1 0.017 5.8E-07 47.4 13.8 129 134-312 25-162 (183)
47 1x9y_A Cysteine proteinase; ha 97.1 0.016 5.3E-07 52.7 14.6 129 134-312 201-338 (367)
48 1cv8_A Staphopain; cysteine pr 96.7 0.066 2.2E-06 43.8 13.9 119 134-298 16-144 (174)
49 3erv_A Putative C39-like pepti 86.9 2.3 8E-05 36.7 8.2 59 232-297 130-196 (236)
50 4d8b_A Streptopain; papain fol 26.8 1.2E+02 0.004 26.3 6.1 52 235-311 172-226 (261)
51 1th5_A NIFU1; iron-sulfur clus 26.1 28 0.00096 24.1 1.5 26 130-157 37-62 (74)
52 1ziv_A Calpain 9; cysteine pro 25.6 50 0.0017 29.8 3.6 39 274-312 245-314 (339)
53 2r9f_A Calpain-1 catalytic sub 25.0 53 0.0018 29.7 3.7 39 274-312 246-314 (339)
54 1dki_A Pyrogenic exotoxin B zy 24.8 1.6E+02 0.0055 26.8 6.9 52 235-311 290-344 (371)
No 1
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=1.9e-88 Score=635.92 Aligned_cols=308 Identities=42% Similarity=0.800 Sum_probs=267.1
Q ss_pred hhccCCC-chhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEcccCCCCCHHHHHHhhccc
Q 037516 12 VMSRTLH-EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGY 90 (330)
Q Consensus 12 ~~~~~~~-~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~~~~s~~~g~N~fsDlt~eE~~~~~~~~ 90 (330)
-+...+. ++.+.++|++||++|+|+|.+.+|+.+|++||++|+++|++||++ +.+|++|+|+|+|||.+||++++++.
T Consensus 51 y~~~dl~s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~-~~sy~~g~N~FaDlT~eEf~~~~~~~ 129 (363)
T 3tnx_A 51 YSQNDLTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKK-NNSYWLGLNVFADMSNDEFKEKYTGS 129 (363)
T ss_dssp ---CCSSCHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTS-CCSEEECSCTTTTSCHHHHHHHHSCS
T ss_pred CChhhhcCHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcC-CCCeEEeccccccCCHHHHHHHhccc
Confidence 3344443 788999999999999999999999999999999999999999997 78999999999999999999998876
Q ss_pred CCCCCCcccccccccccccCCCCCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhh
Q 037516 91 KMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQV 170 (330)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l 170 (330)
.......... . .... ......+||++||||++|+|+||||||.||||||||+++++|++++++++.++.||+|+|
T Consensus 130 ~~~~~~~~~~--~--~~~~-~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~L 204 (363)
T 3tnx_A 130 IAGNYTTTEL--S--YEEV-LNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQEL 204 (363)
T ss_dssp SCSCCCCSSS--S--SSCC-CCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHH
T ss_pred cccccccccc--c--cccc-cCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHH
Confidence 5433110110 0 0111 111233799999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCC-CCCCCCChHHHHHHHHHcCCCCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-CcHHHHHHHHhcCCeEE
Q 037516 171 LDCSGS-RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSV 248 (330)
Q Consensus 171 ~dc~~~-~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~~gPv~v 248 (330)
+||+.. .||+||.+..|+.|+.++ |+++|++|||.+.++.|..........++.++..++ .++..++.++++|||+|
T Consensus 205 vdC~~~~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~~gPvsv 283 (363)
T 3tnx_A 205 LDCDRRSYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSV 283 (363)
T ss_dssp HHHCTTSCTTBCCCHHHHHHHHHHT-CBCBTTTSCCCSSCCCCCGGGGCSCSBCCCEEEEECSSCHHHHHHHHTTSCEEE
T ss_pred hcccCCCCCCCCCChHHHHhHHHhc-CccccccCCCcCcCCCcccCCCCCceeeccceEEcchhhHHHHHHHHHcCCcEE
Confidence 999877 899999999999999987 999999999999888887654444556777888777 78889999999999999
Q ss_pred EEeeCCCCcccccCCEEeCCCCCCCCeEEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCC-CCCcccccceee
Q 037516 249 AIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASY 327 (330)
Q Consensus 249 ~~~~~~~~f~~y~~Gi~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~-~~~Cgi~~~~~y 327 (330)
+|++..++|++|++|||..+|+..++|||+|||||+ +|||||||||++|||+|||||+|+.++ .|+|||++.|+|
T Consensus 284 ai~a~~~~F~~Y~sGVy~~~~~~~lnHaV~iVGyG~----~YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a~y 359 (363)
T 3tnx_A 284 VLEAAGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGP----NYILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFY 359 (363)
T ss_dssp EECCCSHHHHTEEEEEECCCCCSCCCEEEEEEEEET----TEEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSCEEE
T ss_pred EEEecchhhhCCCCCEECCCCCCCCCeEEEEEEcCC----CcEEEEeCCCCccccCcEEEEEcCCCCCCCcCCccceeee
Confidence 999876789999999999999888999999999987 699999999999999999999999876 688999999999
Q ss_pred ecC
Q 037516 328 PIA 330 (330)
Q Consensus 328 p~~ 330 (330)
|+.
T Consensus 360 Pik 362 (363)
T 3tnx_A 360 PVK 362 (363)
T ss_dssp EEC
T ss_pred ccc
Confidence 973
No 2
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=5.1e-87 Score=622.75 Aligned_cols=304 Identities=41% Similarity=0.755 Sum_probs=269.4
Q ss_pred CCchhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhhc---CCCceEEEcccCCCCCHHHHHHhhcccCCC
Q 037516 17 LHEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMP 93 (330)
Q Consensus 17 ~~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~fsDlt~eE~~~~~~~~~~~ 93 (330)
+.+..+..+|++||++|+|+|.+.+|+.+|++||++|+++|++||++ ++.+|++|+|+|+|||.+||++++++...+
T Consensus 13 ~~~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~~~ 92 (331)
T 3qj3_A 13 LPSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLIMP 92 (331)
T ss_dssp CCHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCCCC
T ss_pred CCCHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhcccccc
Confidence 45788999999999999999999889999999999999999999986 578999999999999999999988876543
Q ss_pred CCCcccccccccccccCCC-----CCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCC--ccccC
Q 037516 94 TRNISNQSQSYANNWFGYP-----DSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGR--LISLS 166 (330)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~-----~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~--~~~lS 166 (330)
... ... ...+... ....+||++||||++|+||||||||.||||||||++++||++++++++. .++||
T Consensus 93 ~~~-~~~-----~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LS 166 (331)
T 3qj3_A 93 ADL-HKN-----GIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVS 166 (331)
T ss_dssp SST-TTT-----CEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBC
T ss_pred ccc-ccc-----CcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcC
Confidence 210 000 0111111 0122799999999999999999999999999999999999999999998 89999
Q ss_pred hhhhhcCCCC-CCCCCCChHHHHHHHHHcCCCCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-CcHHHHHHHHhc-
Q 037516 167 EQQVLDCSGS-RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSR- 243 (330)
Q Consensus 167 ~q~l~dc~~~-~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~~- 243 (330)
+|+|+||+.. .||+||++..|++|+.+++||++|++|||.+.++.|... .....+++++|..++ .++++|+++|++
T Consensus 167 eQ~LvdC~~~~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~~~e~~lk~al~~~ 245 (331)
T 3qj3_A 167 EQQLVDCVPNALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMADGNCHYD-PNQVAARLSGYVYLSGPDENMLADMVATK 245 (331)
T ss_dssp HHHHHHHCTTSCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCC-TTSEEECCSEEEEESSCCHHHHHHHHHHH
T ss_pred HHHHhhhccCCCCCCCCCHHHHHHHHHHcCCcCcccccCccCCCCCCCCC-cccceeEeeEEEEeCCCCHHHHHHHHHhC
Confidence 9999999975 899999999999999988899999999999999999876 345667899999998 689999999995
Q ss_pred CCeEEEEeeCCCCcccccCCEEeCC-CC-CCCCeEEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCCCCCccc
Q 037516 244 QPVSVAIDASSPGFRYYSGGVFAGP-CG-NNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGI 321 (330)
Q Consensus 244 gPv~v~~~~~~~~f~~y~~Gi~~~~-~~-~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~Cgi 321 (330)
|||+|+|++.. +|++|++|||..+ |+ ..++|||+|||||+++|++|||||||||++||++|||||+|+.+ |.|||
T Consensus 246 GPV~v~i~a~~-~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~--n~CgI 322 (331)
T 3qj3_A 246 GPVAVAFDADD-PFGSYSGGVYYNPTCETNKFTHAVLIVGYGNENGQDYWLVKNSWGDGWGLDGYFKIARNAN--NHCGI 322 (331)
T ss_dssp CCEEEEECCCT-TGGGEEEEEECCTTCCSSCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSS--SGGGT
T ss_pred CCEEEEEEccc-ccccccCceEeCCCCCCCcCCEEEEEEEEeccCCceEEEEEcCCCCCcCCCCEEEEEcCCC--CccCc
Confidence 99999999984 4999999999987 86 57899999999999999999999999999999999999999973 78999
Q ss_pred ccceeeecC
Q 037516 322 ARKASYPIA 330 (330)
Q Consensus 322 ~~~~~yp~~ 330 (330)
++.++||++
T Consensus 323 ~~~~~~p~v 331 (331)
T 3qj3_A 323 AGVASVPTL 331 (331)
T ss_dssp TTSCEEEEC
T ss_pred CCceeeeeC
Confidence 999999986
No 3
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=6.4e-87 Score=620.33 Aligned_cols=304 Identities=42% Similarity=0.819 Sum_probs=268.2
Q ss_pred chhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEcccCCCCCHHHHHHhhcccCCCCCCcc
Q 037516 19 EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNIS 98 (330)
Q Consensus 19 ~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~~~~s~~~g~N~fsDlt~eE~~~~~~~~~~~~~~~~ 98 (330)
++++..+|++||++|+|+|.+.+|+.+|+.||++|+++|++||++ +.+|++|+|+|+|||.+||++++++.........
T Consensus 15 e~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~-~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~~~ 93 (322)
T 1pci_A 15 TERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKK-NNSYWLGLNEFADLSNDEFNEKYVGSLIDATIEQ 93 (322)
T ss_dssp HHHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHTT-CCSEEECSCTTTTSCHHHHHHHHCCCBCCCSSCC
T ss_pred hHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEecCccccCCHHHHHHHhcCCCCcccccc
Confidence 678889999999999999998899999999999999999999986 7899999999999999999998877553321100
Q ss_pred cccccccccccCCCCCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCC-CC
Q 037516 99 NQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SR 177 (330)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~-~~ 177 (330)
.. ...+.... ..+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+. ..
T Consensus 94 ~~-----~~~~~~~~-~~~lP~~~DwR~~g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~lSeq~lvdC~~~~~ 167 (322)
T 1pci_A 94 SY-----DEEFINED-IVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSH 167 (322)
T ss_dssp CC-----SEECCCCC-CCCSCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHSCTTSC
T ss_pred cc-----cccccccc-ccCCCCeEecccCCCCCCccccccCCccHHHHHHHHHHHHHHHHcCCccccCHHHHHhhcCCCC
Confidence 00 11121111 2379999999999999999999999999999999999999999999999999999999985 38
Q ss_pred CCCCCChHHHHHHHHHcCCCCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-CcHHHHHHHHhcCCeEEEEeeCCCC
Q 037516 178 GCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPG 256 (330)
Q Consensus 178 gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~~gPv~v~~~~~~~~ 256 (330)
||+||++..|++|+.++ ||++|++|||.+.++.|.........++|.+|..++ .++++|+++|++|||+|+|+++.++
T Consensus 168 gC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~e~~l~~~l~~GPV~v~i~~~~~~ 246 (322)
T 1pci_A 168 GCKGGYPPYALEYVAKN-GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRP 246 (322)
T ss_dssp GGGCBCHHHHHHHHHHH-CBCBTTTSCCCSSCCCCTTTTCCSCCBCCCCEEECCSSBHHHHHHHHHHSCEEEEECTTCHH
T ss_pred CCCCCCHHHHHHHHHHh-CCCchhhCCCCCCCCCCCCCCCCCceEEEeeEEEeCCCcHHHHHHHHHHCCEEEEEeccccc
Confidence 99999999999999998 899999999999999998763333567899999998 6899999999999999999997568
Q ss_pred cccccCCEEeCCCCCCCCeEEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCC-CCCcccccceeeecC
Q 037516 257 FRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330 (330)
Q Consensus 257 f~~y~~Gi~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~-~~~Cgi~~~~~yp~~ 330 (330)
|++|++|||..+|+..++|||+|||||+++|++|||||||||++|||+|||||+|+.+. .|.|||++.++||++
T Consensus 247 f~~Y~~Gvy~~~c~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~n~CgI~~~~~yp~~ 321 (322)
T 1pci_A 247 FQLYKGGIFEGPCGTKVDGAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 321 (322)
T ss_dssp HHTEEEEEECCSCCSCCCEEEEEEEEEEETTEEEEEEECSBCSSSTBTTEEEEECCCSBSSCGGGGGGCCEEECC
T ss_pred ccccCCeEeCCCCCCCCCEEEEEEEEeccCCccEEEEEeCCCCcccCCeEEEEEcCCCCCCCcCCcccceeEEEe
Confidence 99999999998898888999999999999999999999999999999999999999633 488999999999985
No 4
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=3.8e-86 Score=615.52 Aligned_cols=301 Identities=41% Similarity=0.778 Sum_probs=264.3
Q ss_pred CchhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhhc---CCCceEEEcccCCCCCHHHHHHhhcccCCCC
Q 037516 18 HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPT 94 (330)
Q Consensus 18 ~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~fsDlt~eE~~~~~~~~~~~~ 94 (330)
++..+..+|++||++|+|+|.+.+|+.+|+.||++|+++|++||++ ++.+|++|+|+|+|||.+||++ +++.++..
T Consensus 19 ~~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~-~~g~~~~~ 97 (329)
T 3qt4_A 19 PKSLFQEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEFLA-YVNRGKAQ 97 (329)
T ss_dssp -CCHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHHHH-HHHHTCCC
T ss_pred CHHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHHHH-hcCCcccc
Confidence 4678899999999999999999889999999999999999999985 5789999999999999999998 66655321
Q ss_pred CCcccccccccccccCCCCCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCC
Q 037516 95 RNISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS 174 (330)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~ 174 (330)
.. ...... ...+.... .+||++||||++ +||||||||.||||||||++++||++++++++++++||||+|+||+
T Consensus 98 ~~-~~~~~~--~~~~~~~~--~~lP~~~DwR~~-~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~LvdC~ 171 (329)
T 3qt4_A 98 KP-KHPENL--RMPYVSSK--KPLAASVDWRSN-AVSEVKDQGQCGSSWSFSTTGAVEGQLALQRGRLTSLSEQNLIDCS 171 (329)
T ss_dssp -------CC--EEECCCCC--SCCCSCEECTTT-SCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHC
T ss_pred cc-cccccc--cccccCCc--cCCCCCEEcccc-ccCCCccCCCCcChHHHHHHHHHHHHHHHHcCCcccCCHHHHHHhc
Confidence 10 000000 11121122 279999999999 9999999999999999999999999999999999999999999998
Q ss_pred CC---CCCCCCChHHHHHHHHHcCCCCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-CcHHHHHHHHhc-CCeEEE
Q 037516 175 GS---RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSR-QPVSVA 249 (330)
Q Consensus 175 ~~---~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~~-gPv~v~ 249 (330)
.. .||+||++..|++|++++ ||++|++|||.+.++.|... .....+++++|..++ .++++|+++|++ |||+|+
T Consensus 172 ~~~g~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~ 249 (329)
T 3qt4_A 172 SSYGNAGCDGGWMDSAFSYIHDY-GIMSESAYPYEAQGDYCRFD-SSQSVTTLSGYYDLPSGDENSLADAVGQAGPVAVA 249 (329)
T ss_dssp GGGTCCTTBCCCHHHHHHHHHHS-CBCBTTTSCCCSSCCCCCCC-GGGCCBCCSEEEECCTTCHHHHHHHHHHTCCEEEE
T ss_pred cccCCCCCCCCChhHHHHHHHHc-CCCcHHHeeeecCCCCCCCC-cccceEEeceEEEecCCCHHHHHHHHHhCCCEEEE
Confidence 63 799999999999999999 99999999999999999876 345667899999998 689999999995 999999
Q ss_pred EeeCCCCcccccCCEEeCC-CC-CCCCeEEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCCCCCcccccceee
Q 037516 250 IDASSPGFRYYSGGVFAGP-CG-NNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASY 327 (330)
Q Consensus 250 ~~~~~~~f~~y~~Gi~~~~-~~-~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~Cgi~~~~~y 327 (330)
|++. .+|++|++|||..+ |+ ..++|||+|||||+++|++|||||||||++||++|||||+|+.+ |.|||++.++|
T Consensus 250 i~a~-~~f~~Y~~GVy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~--n~CgI~~~~~y 326 (329)
T 3qt4_A 250 IDAT-DELQFYSGGLFYDQTCNQSDLNHGVLVVGYGSDNGQDYWILKNSWGSGWGESGYWRQVRNYG--NNCGIATAASY 326 (329)
T ss_dssp ECCC-GGGTTEEEEEECCSSCCSSCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSSS--SGGGTTTTCEE
T ss_pred EecC-hhhhhccCceeecCCCCCCcCCEEEEEEEEEeeCCccEEEEEeCCCCcccCCcEEEEEeCCC--CccCCCCceeE
Confidence 9998 49999999999987 86 57899999999999999999999999999999999999999973 78999999999
Q ss_pred ecC
Q 037516 328 PIA 330 (330)
Q Consensus 328 p~~ 330 (330)
|++
T Consensus 327 p~v 329 (329)
T 3qt4_A 327 PAL 329 (329)
T ss_dssp EEC
T ss_pred eeC
Confidence 986
No 5
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=1.1e-85 Score=610.30 Aligned_cols=303 Identities=44% Similarity=0.837 Sum_probs=264.4
Q ss_pred chhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhhc---CCCceEEEcccCCCCCHHHHHHhhcccCCCCC
Q 037516 19 EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTR 95 (330)
Q Consensus 19 ~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~fsDlt~eE~~~~~~~~~~~~~ 95 (330)
+.++..+|++||++|+|+|.+.+|+.+|+.||++|+++|++||++ +..+|++|+|+|+|||.+||++++++...+..
T Consensus 4 ~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~ 83 (314)
T 1by8_A 4 EEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLS 83 (314)
T ss_dssp -CTHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHHHHHSCCCCCCSC
T ss_pred cHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHHHHHhccCCCCcc
Confidence 346788999999999999999889999999999999999999985 35799999999999999999988777554321
Q ss_pred CcccccccccccccCCCCCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCC
Q 037516 96 NISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG 175 (330)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~ 175 (330)
.. .. ...+........||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.
T Consensus 84 ~~-~~-----~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g~~~~LSeq~lvdC~~ 157 (314)
T 1by8_A 84 HS-RS-----NDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS 157 (314)
T ss_dssp CC-CS-----SSSSBCCCCSSCCCSCCBSTTTTCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHTTCT
T ss_pred cc-cC-----CccccccccccCCCCeEeCCCCCCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC
Confidence 10 00 1112111112139999999999999999999999999999999999999999999999999999999985
Q ss_pred -CCCCCCCChHHHHHHHHHcCCCCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-CcHHHHHHHHhc-CCeEEEEee
Q 037516 176 -SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSR-QPVSVAIDA 252 (330)
Q Consensus 176 -~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~~-gPv~v~~~~ 252 (330)
..||+||++..|++|+.++.||++|++|||.+.++.|.... ....+++++|..++ .++++|+++|++ |||+|+|++
T Consensus 158 ~~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~ 236 (314)
T 1by8_A 158 ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNP-TGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDA 236 (314)
T ss_dssp TSCGGGCCCSHHHHHHHHHTTCBCBTTTSCCCSSCCCCCCCG-GGCCBCCSCEEECCSSCHHHHHHHHHHHCCEEEEECC
T ss_pred CCCCCcCCCHHHHHHHHHHcCCcCcHhhCCCCCCCCCcCCCC-ccceeEECcEEEecCCCHHHHHHHHHHcCCEEEEEEe
Confidence 48999999999999999666999999999999999998763 33567889999998 689999999995 999999999
Q ss_pred CCCCcccccCCEEeCC-CCC-CCCeEEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCCCCCcccccceeeecC
Q 037516 253 SSPGFRYYSGGVFAGP-CGN-NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330 (330)
Q Consensus 253 ~~~~f~~y~~Gi~~~~-~~~-~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~Cgi~~~~~yp~~ 330 (330)
+.++|++|++|||..+ |+. .++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |.|||++.++||++
T Consensus 237 ~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~--n~CgI~~~~~~p~~ 314 (314)
T 1by8_A 237 SLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKN--NACGIANLASFPKM 314 (314)
T ss_dssp CSHHHHTEEEECBCCTTCCSSCCCEEEEEEEEEEETTEEEEEEECSBTTTSTBTTEEEECCSSS--CGGGTTSSCEEECC
T ss_pred ChHHhhhccCceecCCCCCCCCCCeEEEEEEEeccCCceEEEEEcCCCCCcCcCCEEEEEcCCC--CcCCccCeeEEeeC
Confidence 8568999999999988 875 7899999999999999999999999999999999999999852 78999999999985
No 6
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=1e-85 Score=610.94 Aligned_cols=301 Identities=42% Similarity=0.831 Sum_probs=264.0
Q ss_pred chhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhhc---CCCceEEEcccCCCCCHHHHHHhhcccCCCCC
Q 037516 19 EDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTR 95 (330)
Q Consensus 19 ~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~fsDlt~eE~~~~~~~~~~~~~ 95 (330)
+.++..+|++||++|+|.|.+.+|+.+|+.||++|+++|++||++ +..+|++|+|+|+|||.+||++++++...+..
T Consensus 5 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf~~~~~g~~~~~~ 84 (315)
T 2c0y_A 5 DPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQ 84 (315)
T ss_dssp CGGGHHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHTTSBCCCCG
T ss_pred hHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHHHHHhcCCCCCcc
Confidence 456888999999999999988889999999999999999999975 35799999999999999999888777554321
Q ss_pred CcccccccccccccCCCCCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCC-
Q 037516 96 NISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS- 174 (330)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~- 174 (330)
... ...+.. +...+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+
T Consensus 85 --~~~-----~~~~~~-~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g~~~~LSeq~lvdC~~ 156 (315)
T 2c0y_A 85 --WQR-----NITYKS-NPNRILPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCST 156 (315)
T ss_dssp --GGS-----CBCC-------CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSC
T ss_pred --ccC-----CccccC-cccCCCCCeEecCCCCCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhCCCcCcCHHHHHhhcc
Confidence 001 111111 11226999999999999999999999999999999999999999999999999999999998
Q ss_pred C---CCCCCCCChHHHHHHHHHcCCCCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-CcHHHHHHHHhc-CCeEEE
Q 037516 175 G---SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSR-QPVSVA 249 (330)
Q Consensus 175 ~---~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~~-gPv~v~ 249 (330)
. ..||+||++..|++|+.+++||++|++|||.+.++.|.... ....+++++|..++ .++++|+++|++ |||+|+
T Consensus 157 ~~~~~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~ 235 (315)
T 2c0y_A 157 EKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDS-KYRAATCSKYTELPYGREDVLKEAVANKGPVSVG 235 (315)
T ss_dssp GGGTCCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCG-GGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEE
T ss_pred cccCCCCCCCCCHHHHHHHHHHhCCcCchhcCCCccCCCCcccCC-cccccccCCeEEeCCCCHHHHHHHHHHcCCEEEE
Confidence 3 48999999999999998656999999999999999998763 34567889999998 689999999994 999999
Q ss_pred EeeCCCCcccccCCEEeCC-CCCCCCeEEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCCCCCcccccceeee
Q 037516 250 IDASSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328 (330)
Q Consensus 250 ~~~~~~~f~~y~~Gi~~~~-~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~Cgi~~~~~yp 328 (330)
|++..++|++|++|||..+ |+..++|||+|||||+++|++|||||||||++||++|||||+|+.+ |.|||++.++||
T Consensus 236 i~~~~~~f~~Y~~Gvy~~~~c~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~--n~CgI~~~~~~p 313 (315)
T 2c0y_A 236 VDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKG--NHCGIASFPSYP 313 (315)
T ss_dssp ECCCSHHHHTEEEEEECCTTCCSCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSS--SGGGTTTSCEEE
T ss_pred EecCchhhhccCCCcccCCCCCCcCCEEEEEEEEeecCCCcEEEEEcCCCCCcCCCcEEEEEcCCC--CccCcCceeEEe
Confidence 9998568999999999988 8888899999999999999999999999999999999999999852 789999999999
Q ss_pred cC
Q 037516 329 IA 330 (330)
Q Consensus 329 ~~ 330 (330)
++
T Consensus 314 ~~ 315 (315)
T 2c0y_A 314 EI 315 (315)
T ss_dssp EC
T ss_pred eC
Confidence 85
No 7
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=4.2e-85 Score=607.01 Aligned_cols=298 Identities=43% Similarity=0.848 Sum_probs=261.8
Q ss_pred hhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhhc---CCCceEEEcccCCCCCHHHHHHhhcccCCCCCC
Q 037516 20 DSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKMPTRN 96 (330)
Q Consensus 20 ~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~fsDlt~eE~~~~~~~~~~~~~~ 96 (330)
..+..+|++||++|+|+| +.+|+.+|+.||++|+++|++||++ ++.+|++|+|+|+|||.+||++++++..+...
T Consensus 6 ~~~~~~f~~~~~~~~k~Y-~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~- 83 (316)
T 1cs8_A 6 HSLEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKP- 83 (316)
T ss_dssp GGGHHHHHHHHHHTTCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCC-
T ss_pred HHHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHHHHHhcCCCCCcc-
Confidence 357889999999999999 7789999999999999999999985 46799999999999999999988777553221
Q ss_pred cccccccccccccCCCCCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCC-
Q 037516 97 ISNQSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG- 175 (330)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~- 175 (330)
.. ...+.. +...+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.
T Consensus 84 --~~-----~~~~~~-~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~ 155 (316)
T 1cs8_A 84 --RK-----GKVFQE-PLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGP 155 (316)
T ss_dssp --SC-----CEECCC-CTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGG
T ss_pred --cc-----CccccC-ccccCCCCcEecCCCCCcCCCCcccCCccHHHHHHHHHHHHHHHHHcCCCcCcCHHHHHHhccc
Confidence 11 111111 112379999999999999999999999999999999999999999999999999999999985
Q ss_pred --CCCCCCCChHHHHHHHHHcCCCCCCCCCcccCCCCcccCCcCCcccEEeeeeeecCCcHHHHHHHHhc-CCeEEEEee
Q 037516 176 --SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSR-QPVSVAIDA 252 (330)
Q Consensus 176 --~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~i~~~l~~-gPv~v~~~~ 252 (330)
..||+||++..|++|+.++.|+++|++|||.+.++.|.... ....+++++|..++.++++|+++|++ |||+|+|++
T Consensus 156 ~g~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~ik~~l~~~GPV~v~i~~ 234 (316)
T 1cs8_A 156 QGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNP-KYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDA 234 (316)
T ss_dssp GTCCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCG-GGEEECCCCEEECCSCHHHHHHHHHHHCCEEEEECC
T ss_pred cCCCCCCCCCHHHHHHHHHHhCCcCchhccCCCCCCCCcCCCC-ccceeEeccEEEeCCCHHHHHHHHHhcCCEEEEEec
Confidence 38999999999999998555999999999999999998763 34567899999997789999999995 999999999
Q ss_pred CCCCcccccCCEEeCC-CCC-CCCeEEEEEEee---cc-CCcCeEEEECCCCCCccCCceEEEEecCCCCCCccccccee
Q 037516 253 SSPGFRYYSGGVFAGP-CGN-NLNHAVTIVGYG---SS-NEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKAS 326 (330)
Q Consensus 253 ~~~~f~~y~~Gi~~~~-~~~-~~~Hav~iVGyg---~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~Cgi~~~~~ 326 (330)
..++|++|++|||..+ |+. .++|||+||||| ++ +|++|||||||||++||++|||||+|+.+ |.|||++.++
T Consensus 235 ~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~--n~CgI~~~~~ 312 (316)
T 1cs8_A 235 GHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR--NHCGIASAAS 312 (316)
T ss_dssp CSHHHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSS--SGGGTTTSCE
T ss_pred CChhhccccCceECCCCCCCCCCCEEEEEEEecCCcccCCCCcEEEEEcCCCCCcccCCEEEEECCCC--CccCccceee
Confidence 8558999999999987 875 789999999999 76 78999999999999999999999999863 7899999999
Q ss_pred eecC
Q 037516 327 YPIA 330 (330)
Q Consensus 327 yp~~ 330 (330)
||++
T Consensus 313 ~p~~ 316 (316)
T 1cs8_A 313 YPTV 316 (316)
T ss_dssp EECC
T ss_pred EeeC
Confidence 9985
No 8
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=4.3e-84 Score=598.74 Aligned_cols=293 Identities=38% Similarity=0.722 Sum_probs=256.1
Q ss_pred HHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhhc---CCCceEEEcccCCCCCHHHHHHhhcc-cCCCCCCccc
Q 037516 24 AKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIASHTG-YKMPTRNISN 99 (330)
Q Consensus 24 ~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~fsDlt~eE~~~~~~~-~~~~~~~~~~ 99 (330)
.+|++||++|+|+|.+.+|+.+| .||++|+++|++||++ ++.+|++|+|+|+|||.+||++++++ ...+... ..
T Consensus 3 ~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~-~~ 80 (310)
T 2o6x_A 3 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDI-LS 80 (310)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHHHHHHCCCCCCGGGG-SC
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHHHHHhcCCCCCcccc-cc
Confidence 58999999999999888899999 9999999999999985 36799999999999999999987776 4332100 00
Q ss_pred ccccccccccCCCCCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCC---C
Q 037516 100 QSQSYANNWFGYPDSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---S 176 (330)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~---~ 176 (330)
. ...+...+. +||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+. .
T Consensus 81 ~-----~~~~~~~~~--~lP~~~DwR~~g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~~~~ 153 (310)
T 2o6x_A 81 H-----GVPYEANNR--AVPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGN 153 (310)
T ss_dssp S-----SEECCC------CCSCEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGGGTC
T ss_pred c-----CCccccccC--CCCCeEecCcCCCCCCcccCCCCCccHHHHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhccCC
Confidence 0 011211112 69999999999999999999999999999999999999999999999999999999985 4
Q ss_pred CCCCCCChHHHHHHHHHcCCCCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-CcHHHHHHHHh-cCCeEEEEeeCC
Q 037516 177 RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVS-RQPVSVAIDASS 254 (330)
Q Consensus 177 ~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~-~gPv~v~~~~~~ 254 (330)
.||+||++..|++|+.. .||++|++|||.+.++.|... .....+++++|..++ .++++|+++|+ +|||+|+|++.
T Consensus 154 ~gC~GG~~~~a~~yi~~-~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~~~~~~i~~~l~~~GPV~v~i~~~- 230 (310)
T 2o6x_A 154 NGCGGGLMENAYQYLKQ-FGLETESSYPYTAVEGQCRYN-KQLGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVE- 230 (310)
T ss_dssp CGGGCCCHHHHHHHHTT-SCBCBTTTSCCCSSCCCCCCC-GGGCCEEEEEEEEECSCCHHHHHHHHHHHCCEEEEECCC-
T ss_pred CCCCCCCHHHHHHHHHH-CCcCchhcCCCCCCCCCccCC-CCCCceEeCeEEEeCCCCHHHHHHHHHhcCCeEEEEecc-
Confidence 89999999999999985 599999999999999999876 334568999999998 68999999999 59999999998
Q ss_pred CCcccccCCEEeCC-CC-CCCCeEEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCCCCCcccccceeeecC
Q 037516 255 PGFRYYSGGVFAGP-CG-NNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330 (330)
Q Consensus 255 ~~f~~y~~Gi~~~~-~~-~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~Cgi~~~~~yp~~ 330 (330)
++|++|++|||..+ |+ ..++|||+|||||+++|++|||||||||++||++|||||+|+.+ |.|||++.++||++
T Consensus 231 ~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~--n~Cgi~~~~~~p~~ 306 (310)
T 2o6x_A 231 SDFMMYRSGIYQSQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMVRNRG--NMCGIASLASLPMV 306 (310)
T ss_dssp HHHHTEEEEEECCSSCCTTCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSS--SGGGTTTSEEEEEE
T ss_pred hhhhhCCCceecCCCCCCCCCCEEEEEEEEeccCCceEEEEEeCCCCccCCCcEEEEEcCCC--CcCCccceeeEEEe
Confidence 68999999999976 87 47899999999999999999999999999999999999999863 78999999999974
No 9
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=2.2e-80 Score=573.29 Aligned_cols=285 Identities=27% Similarity=0.492 Sum_probs=247.2
Q ss_pred HHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEcccCCCCCHHHHHHhhcccCCCCCCcccccccc
Q 037516 25 KHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSY 104 (330)
Q Consensus 25 ~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~~~~s~~~g~N~fsDlt~eE~~~~~~~~~~~~~~~~~~~~~~ 104 (330)
+|++||++|+|.|.+.+|+.+|+.||++|+++|++ |+ . |+|+|+|||.+||++++++..... .....
T Consensus 7 ~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N~--~-----g~N~F~Dlt~eEf~~~~~~~~~~~---~~~~~-- 73 (312)
T 1xkg_A 7 TFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQS-NG--G-----AINHLSDLSLDEFKNRFLMSAEAF---EHLKT-- 73 (312)
T ss_dssp SHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH-HC--C-----CCCTTTTSCHHHHHHHHSBCHHHH---HHHHH--
T ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHh-cc--C-----CCCcccCCCHHHHHHHhcCCCCcc---ccccC--
Confidence 69999999999999989999999999999999999 74 2 999999999999998666632111 00000
Q ss_pred cccccCCC----CCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCCCCCCC
Q 037516 105 ANNWFGYP----DSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRGCY 180 (330)
Q Consensus 105 ~~~~~~~~----~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~gC~ 180 (330)
...+... ....+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+...||+
T Consensus 74 -~~~~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~GC~ 152 (312)
T 1xkg_A 74 -QFDLNAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCASQHGCH 152 (312)
T ss_dssp -HHC-----CBCCCCSCCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTCSSTTB
T ss_pred -CcccccccccccccccCCCccccccCCCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhccCCCCCC
Confidence 0011100 11127999999999999999999999999999999999999999999999999999999999338999
Q ss_pred CCChHHHHHHHHHcCCCCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-CcHHHHHHHHhc--CCeEEEEeeCCC-C
Q 037516 181 GGWMDDAFSYIIRSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSR--QPVSVAIDASSP-G 256 (330)
Q Consensus 181 GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~~--gPv~v~~~~~~~-~ 256 (330)
||++..|++|+.+. ||++|++|||.+.++.|. . .....+++++|..++ .++++|+++|++ |||+|+|+++.. +
T Consensus 153 GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~-~-~~~~~~~i~~y~~v~~~~~~~ik~al~~~~GPV~v~i~~~~~~~ 229 (312)
T 1xkg_A 153 GDTIPRGIEYIQHN-GVVQESYYRYVAREQSCR-R-PNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDA 229 (312)
T ss_dssp CCCHHHHHHHHHHH-CEEBGGGSCCCSSCCCCC-C-CSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHH
T ss_pred CCCHHHHHHHHHHc-CCCccccCCccCCCCCCC-C-CCCceEEEeeEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccccc
Confidence 99999999999986 999999999999999998 4 344578899999998 689999999985 999999999933 8
Q ss_pred cccccCCEEeCC-CC-C-CCCeEEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCCCCCcccccceeeecC
Q 037516 257 FRYYSGGVFAGP-CG-N-NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330 (330)
Q Consensus 257 f~~y~~Gi~~~~-~~-~-~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~Cgi~~~~~yp~~ 330 (330)
|++|++|||..+ |+ . . +|||+|||||+++|++|||||||||++||++|||||+|+. |.|||++.++||++
T Consensus 230 f~~Y~~GVy~~~~c~~~~~-~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~---n~CgI~~~~~~~~~ 302 (312)
T 1xkg_A 230 FRHYDGRTIIQRDNGYQPN-YHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANI---DLMMIEEYPYVVIL 302 (312)
T ss_dssp HHTCCSSSCBCCCCSSCCE-EEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS---CGGGTTTCCEEEEC
T ss_pred ccccCCcEEcCCCCCCCcC-ceEEEEEEEeccCCceEEEEEeCCCCcccCCcEEEEEcCC---CcccccceeEEeec
Confidence 999999999986 86 4 6 9999999999999999999999999999999999999994 78999999999974
No 10
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=8.4e-73 Score=542.91 Aligned_cols=276 Identities=28% Similarity=0.522 Sum_probs=183.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCceEEE-cccCCCCCHHHHHHhhcccCCCCCCcccccccccccccCCCCCCCCCC
Q 037516 41 AEKAMRFKIFKKNFRFIEKFNREGNQTYKLS-LNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLP 119 (330)
Q Consensus 41 ~E~~~R~~iF~~n~~~I~~~N~~~~~s~~~g-~N~fsDlt~eE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP 119 (330)
.|+.+|++||++|+++|++||++ +.+|+++ +|+|+|||.+||++++++.+..... ... .. .... ......+||
T Consensus 135 ~~~~~R~~if~~N~~~I~~~N~~-~~~~~~~~~n~faDlT~eEf~~~~~~~~~~~~~-~~~-~~--~~~~-~~~~~~~lP 208 (441)
T 3pdf_A 135 SQEKYSNRLYKYDHNFVKAINAI-QKSWTATTYMEYETLTLGDMIRRSGGHSRKIPR-PKP-AP--LTAE-IQQKILFLP 208 (441)
T ss_dssp -----------------------------------------------------------------------------CCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHcc-CCceEeecccccccCCHHHHHHHhCCCcccccc-ccc-Cc--cccc-cccccccCC
Confidence 46789999999999999999987 6799998 8999999999999987765432210 000 00 0000 011123799
Q ss_pred CeeecCCCC---CCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCcc--ccChhhhhcCCCC-CCCCCCChHHH-HHHHH
Q 037516 120 RSIDWRARG---AVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLI--SLSEQQVLDCSGS-RGCYGGWMDDA-FSYII 192 (330)
Q Consensus 120 ~~~Dwr~~g---~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~--~lS~q~l~dc~~~-~gC~GG~~~~a-~~~~~ 192 (330)
++||||+++ +|+||||||.||||||||++++||++++++++..+ .||||+|+||+.. .||+||++..+ ++|++
T Consensus 209 ~s~DwR~~~g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~~~~GC~GG~~~~aa~~yi~ 288 (441)
T 3pdf_A 209 TSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQYAQGCEGGFPYLIAGKYAQ 288 (441)
T ss_dssp SCEETTCBTTBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCTTSCTTBCCCHHHHTTHHHH
T ss_pred CCEECCcCCCCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhccCCCCCCCCchhHHHHHHHH
Confidence 999999964 89999999999999999999999999999998765 4999999999875 89999999987 89998
Q ss_pred HcCCCCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-----CcHHHHHHHHh-cCCeEEEEeeCCCCcccccCCEEe
Q 037516 193 RSQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-----TSELALRYAVS-RQPVSVAIDASSPGFRYYSGGVFA 266 (330)
Q Consensus 193 ~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-----~~~~~i~~~l~-~gPv~v~~~~~~~~f~~y~~Gi~~ 266 (330)
++ ||++|++|||.+.++.|... .....+.+.+|..++ .++++|+++|+ +|||+|+|++. ++|++|++|||.
T Consensus 289 ~~-Gi~tE~~yPY~~~~~~C~~~-~~~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~-~~F~~Y~sGVy~ 365 (441)
T 3pdf_A 289 DF-GLVEEACFPYTGTDSPCKMK-EDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVY-DDFLHYKKGIYH 365 (441)
T ss_dssp HT-CBCBGGGSCCCSSCCCSCCC-SSCCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCC-GGGGGCCSSEEC
T ss_pred hc-CCCcHHHeeecccCCCCCCc-cccceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEec-ccccccCCceEe
Confidence 88 99999999999999999875 334556778888774 47889999987 69999999998 799999999998
Q ss_pred CC-CC------CCCCeEEEEEEeecc--CCcCeEEEECCCCCCccCCceEEEEecCCCCCCcccccceeee
Q 037516 267 GP-CG------NNLNHAVTIVGYGSS--NEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328 (330)
Q Consensus 267 ~~-~~------~~~~Hav~iVGyg~~--~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~Cgi~~~~~yp 328 (330)
.+ |. ..++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||+++++++
T Consensus 366 ~~~~~~~~~~~~~~~HaV~iVGyG~~~~~G~~YWIVkNSWG~~WGe~GYfri~rg~---n~CGI~s~~~a~ 433 (441)
T 3pdf_A 366 HTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGT---DECAIESIAVAA 433 (441)
T ss_dssp CC---CCCCCCCCCCEEEEEEEEEECTTTCCEEEEEECSBCTTSTBTTEEEEECSS---CGGGTTSCCEEE
T ss_pred cCCCCcccCCCCcCCeEEEEEEecccCCCCceEEEEEcCCCCCcCCCeEEEEEcCC---CccCCCCceEEe
Confidence 87 32 248999999999986 6889999999999999999999999996 679999988754
No 11
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=4.6e-72 Score=520.78 Aligned_cols=274 Identities=28% Similarity=0.472 Sum_probs=183.3
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCceEEEcc-cCCCCCHHHHHHhhcccCCCCCCcccccccccccccCCCCCCCCCCCee
Q 037516 44 AMRFKIFKKNFRFIEKFNREGNQTYKLSLN-EFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSI 122 (330)
Q Consensus 44 ~~R~~iF~~n~~~I~~~N~~~~~s~~~g~N-~fsDlt~eE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~ 122 (330)
..|+..+..+.++|++||++.+.+|++++| +|+|||.+||++++ +..+........ . ...+...+...+||++|
T Consensus 2 ~~~~~a~~~~~~~i~~~N~~~~~~~~~~~n~~f~dlt~eE~~~~~-g~~~~~~~~~~~--~--~~~~~~~~~~~~lP~s~ 76 (325)
T 3hhi_A 2 LVAEDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLN-GVIKKNNNASIL--P--KRRFTEEEARAPLPSSF 76 (325)
T ss_dssp -------------------------------------------------------CCS--C--BCCCCHHHHHCCCCSCE
T ss_pred CcccccccccHHHHHHHHhCCCCceEEecccccccCCHHHHHHHh-CCCCCCcccccc--c--CccccccccccCCCCcE
Confidence 357788889999999999875689999999 89999999998864 433221100000 0 11111111113799999
Q ss_pred ecCCC----CCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCC-ccccChhhhhcCCCC--CCCCCCChHHHHHHHHHcC
Q 037516 123 DWRAR----GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGR-LISLSEQQVLDCSGS--RGCYGGWMDDAFSYIIRSQ 195 (330)
Q Consensus 123 Dwr~~----g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~-~~~lS~q~l~dc~~~--~gC~GG~~~~a~~~~~~~~ 195 (330)
|||++ |.|+||||||.||||||||++++||++++++++. .++||||+|+||+.. .||+||++..|++|++++
T Consensus 77 DwR~~w~~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~~~~~GC~GG~~~~A~~yi~~~- 155 (325)
T 3hhi_A 77 DSAEAWPNCPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSST- 155 (325)
T ss_dssp EHHHHSTTCTTTTCCCBCCSSBCHHHHHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCGGGBCTTBCBCHHHHHHHHHHT-
T ss_pred ehhHhcCCCCccccccCCCCccccHHHHHHHHHHHHHHHHhCCCccccCHHHHHHhccCCCCCCCCCCHHHHHHHHHHh-
Confidence 99998 8999999999999999999999999999999997 899999999999874 899999999999999998
Q ss_pred CCCCCCCCccc-CC----------CCcccCCc---------------CCcccEEeeeeeecCCcHHHHHHHHh-cCCeEE
Q 037516 196 GLTDERVYPYQ-RR----------EGYCNWQR---------------GAMKAARIRSYQDVPTSELALRYAVS-RQPVSV 248 (330)
Q Consensus 196 Gi~~e~~yPY~-~~----------~~~c~~~~---------------~~~~~~~i~~~~~v~~~~~~i~~~l~-~gPv~v 248 (330)
|+++|++|||. +. .+.|.... .......+.+|. + .++++|+++|+ +|||+|
T Consensus 156 Gi~~e~~yPY~~~~c~~~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~y~-v-~~~~~i~~~i~~~GPV~v 233 (325)
T 3hhi_A 156 GLVSDYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCDYTCDDPTIPVVNYRSWTSYA-L-QGEDDYMRELFFRGPFEV 233 (325)
T ss_dssp CBCBTTTSCCSSCCCBSSSCCTTCCCBGGGCCCCCCCCCSSCSSTTSCCCCBCEEEEEE-E-CSHHHHHHHHHHHCCEEE
T ss_pred CCCcccccCCccccccccccccccCCCCCCcccCCcchhhcccccccccceEEeecceE-e-CCHHHHHHHHHHCCCEEE
Confidence 99999999998 32 25665100 001223566776 5 78999999997 699999
Q ss_pred EEeeCCCCcccccCCEEeCCCCC-CCCeEEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCCCCCcccccceee
Q 037516 249 AIDASSPGFRYYSGGVFAGPCGN-NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASY 327 (330)
Q Consensus 249 ~~~~~~~~f~~y~~Gi~~~~~~~-~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~Cgi~~~~~y 327 (330)
+|+++ ++|++|++|||..+|+. .++|||+|||||+++|++|||||||||++|||+|||||+|+. |.|||++++++
T Consensus 234 ~i~~~-~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~GY~~i~rg~---n~CGI~~~~~~ 309 (325)
T 3hhi_A 234 AFDVY-EDFIAYNSGVYHHVSGQYLGGHAVRLVGWGTSNGVPYWKIANSWNTEWGMDGYFLIRRGS---SECGIEDGGSA 309 (325)
T ss_dssp EEEEE-HHHHTCCSSEECCCSCCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS---CGGGTTSCEEE
T ss_pred EEEec-cccccccCceecCCCCCCCCCEEEEEEEEEecCCceEEEEEeCCCCCcccCCEEEEEcCC---CeecCccceEE
Confidence 99998 78999999999988654 469999999999999999999999999999999999999996 78999999887
Q ss_pred ec
Q 037516 328 PI 329 (330)
Q Consensus 328 p~ 329 (330)
++
T Consensus 310 g~ 311 (325)
T 3hhi_A 310 GI 311 (325)
T ss_dssp EE
T ss_pred ee
Confidence 64
No 12
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=9.3e-68 Score=468.15 Aligned_cols=213 Identities=53% Similarity=1.075 Sum_probs=197.3
Q ss_pred CCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCCC-CCCCCCChHHHHHHHHHcC
Q 037516 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS-RGCYGGWMDDAFSYIIRSQ 195 (330)
Q Consensus 117 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~gC~GG~~~~a~~~~~~~~ 195 (330)
+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+.. .||+||++..|++|+++++
T Consensus 2 ~lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~~~~ 81 (221)
T 1cqd_A 2 DLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTANHGCRGGWMNPAFQFIVNNG 81 (221)
T ss_dssp -CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCCcCcCCCCCCcCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCCCCCCCCCCCHHHHHHHHHHhC
Confidence 689999999999999999999999999999999999999999999999999999999875 8999999999999999877
Q ss_pred CCCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-CcHHHHHHHHhcCCeEEEEeeCCCCcccccCCEEeCCCCCCCC
Q 037516 196 GLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLN 274 (330)
Q Consensus 196 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~Gi~~~~~~~~~~ 274 (330)
|+++|++|||.+.++.|.... ....+++++|..++ .++++|+++|++|||+++|++..++|++|++|||..+|+..++
T Consensus 82 Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~~ 160 (221)
T 1cqd_A 82 GINSEETYPYRGQDGICNSTV-NAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNISAN 160 (221)
T ss_dssp SBCBTTTSCCCSSCCCCCSSS-CCCSBCCSEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCCCCC
T ss_pred CccccccCCccCCCCCcCCCC-CCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEeccCcccccccCccccCCCCCcCC
Confidence 999999999999999998763 34567899999888 6799999999999999999998568999999999988888899
Q ss_pred eEEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCC-CCCcccccceeeecC
Q 037516 275 HAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330 (330)
Q Consensus 275 Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~-~~~Cgi~~~~~yp~~ 330 (330)
|||+|||||+++|++|||||||||++|||+|||||+|+.+. .|.|||+++++||++
T Consensus 161 HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 217 (221)
T 1cqd_A 161 HALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPVK 217 (221)
T ss_dssp EEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred eEEEEEEEcccCCCcEEEEEeCCCCCcccCCEEEEEcCCCCCCcccceeeeeeEEEe
Confidence 99999999999999999999999999999999999998643 488999999999985
No 13
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=6.4e-68 Score=469.10 Aligned_cols=213 Identities=54% Similarity=1.067 Sum_probs=196.6
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCCC---CCCCCCChHHHHHHHHHc
Q 037516 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---RGCYGGWMDDAFSYIIRS 194 (330)
Q Consensus 118 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~---~gC~GG~~~~a~~~~~~~ 194 (330)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||||+|+||+.. .||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 80 (220)
T 3p5u_A 1 LPDYVDWRSSGAVVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQFIINN 80 (220)
T ss_dssp CCSCEETTTTTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCcCCcCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999874 799999999999999988
Q ss_pred CCCCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-CcHHHHHHHHhcCCeEEEEeeCCCCcccccCCEEeCCCCCCC
Q 037516 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNL 273 (330)
Q Consensus 195 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~Gi~~~~~~~~~ 273 (330)
+|+++|++|||.+.++.|.........+++.+|..++ .++++|+++|.+|||+++|++..++|++|++|||..+|+..+
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~l~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~~ 160 (220)
T 3p5u_A 81 GGINTEANYPYTAEEGQCNLDLQQEKYVSIDTYENVPYNNEWALQTAVAYQPVSVALEAAGYNFQHYSSGIFTGPCGTAV 160 (220)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHHHTCCSBCCCEEEECCTTCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCCSC
T ss_pred CCcCcccccccccCCCCcCcCCCCCceEEEccEEEeCCCcHHHHHHHHhcCCEEEEEecCchhhccccCceECCCCCCcc
Confidence 7999999999999999998653333457889999997 789999999988999999999756899999999998898889
Q ss_pred CeEEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCCCCCcccccceeeecC
Q 037516 274 NHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330 (330)
Q Consensus 274 ~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~Cgi~~~~~yp~~ 330 (330)
+|||+|||||++++++|||||||||++|||+|||||+|+.+..|.|||+++++||++
T Consensus 161 ~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~Cgi~~~~~~p~~ 217 (220)
T 3p5u_A 161 DHAVTIVGYGTEGGIDYWIVKNSWGTTWGEEGYMRIQRNVGGVGQCGIAKKASYPVK 217 (220)
T ss_dssp CEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCCCTTCGGGTTSSCEEEEC
T ss_pred ceEEEEEEEecCCCceEEEEECCCCCCcccCCEEEEECCCCCCCccCcccccceEEE
Confidence 999999999999999999999999999999999999999753358999999999984
No 14
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=9.9e-68 Score=466.40 Aligned_cols=212 Identities=47% Similarity=0.964 Sum_probs=196.2
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCC-CCCCCCCChHHHHHHHHHcCC
Q 037516 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQG 196 (330)
Q Consensus 118 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~-~~gC~GG~~~~a~~~~~~~~G 196 (330)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||+. ..||+||++..|++|++++ |
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~yi~~~-G 79 (216)
T 1ppo_A 1 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSHGCKGGYPPYALEYVAKN-G 79 (216)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCSSSCTTBCCCHHHHHHHHHHH-C
T ss_pred CCCcCcCCCCCCCCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccCCCCCCCCCCHHHHHHHHHHh-C
Confidence 7999999999999999999999999999999999999999999999999999999985 4899999999999999998 8
Q ss_pred CCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-CcHHHHHHHHhcCCeEEEEeeCCCCcccccCCEEeCCCCCCCCe
Q 037516 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNH 275 (330)
Q Consensus 197 i~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~Gi~~~~~~~~~~H 275 (330)
+++|++|||.+.++.|+........+++.+|..++ .++++|+++|++|||+++|+++.++|++|++|||..+|+..++|
T Consensus 80 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~~~H 159 (216)
T 1ppo_A 80 IHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVDH 159 (216)
T ss_dssp BCBTTTSCCCSSCCCCCGGGCCSCCBCCCEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHHCCSSEECCSCCSCCCE
T ss_pred cCccccCCccCCCCCcCCCCCCCceEEeccEEEECCCCHHHHHHHHHhCCEEEEEecCChhhhhcCCceECCCCCCCCCE
Confidence 99999999999999998653334567899999998 68999999999999999999975689999999999888877899
Q ss_pred EEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCC-CCCcccccceeeecC
Q 037516 276 AVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330 (330)
Q Consensus 276 av~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~-~~~Cgi~~~~~yp~~ 330 (330)
||+|||||+++|++|||||||||++|||+|||||+|+.++ .|.|||+++++||++
T Consensus 160 aV~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~~p~~ 215 (216)
T 1ppo_A 160 AVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 215 (216)
T ss_dssp EEEEEEEEEETTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCEEEEC
T ss_pred EEEEEEeeccCCccEEEEEeCCCCCcccCcEEEEEcCCCCCCCcCccccceeeEee
Confidence 9999999999999999999999999999999999999643 488999999999985
No 15
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=2e-67 Score=465.13 Aligned_cols=212 Identities=48% Similarity=0.982 Sum_probs=195.9
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCC-CCCCCCCChHHHHHHHHHcCC
Q 037516 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQG 196 (330)
Q Consensus 118 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~-~~gC~GG~~~~a~~~~~~~~G 196 (330)
||++||||++|+|+||||||.||||||||+++++|++++++++..++||+|+|+||+. ..||+||++..|++|++++ |
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~~~-G 79 (218)
T 1yal_A 1 YPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDKHSYGCKGGYQTTSLQYVANN-G 79 (218)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHH-C
T ss_pred CCCcCcCCCCCCCCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcCCCCCCCCCCHHHHHHHHHHc-C
Confidence 7999999999999999999999999999999999999999999999999999999984 3899999999999999998 8
Q ss_pred CCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-CcHHHHHHHHhcCCeEEEEeeCCCCcccccCCEEeCCCCCCCCe
Q 037516 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNH 275 (330)
Q Consensus 197 i~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~Gi~~~~~~~~~~H 275 (330)
+++|++|||.+.++.|.........+++.+|..++ .++++|+++|++|||+++|+++.++|++|++|||..+|+..++|
T Consensus 80 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~~H 159 (218)
T 1yal_A 80 VHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGVFDGPCGTKLDH 159 (218)
T ss_dssp BCBTTTSCCCSSCCCCCGGGCCSCCBCCSEEEECCSSBHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSCCCE
T ss_pred CCccccccccCCCCCcccCcCCCceEEEeeEEEeCCCCHHHHHHHHHhCCEEEEEeccchhccccCCceECCCCCCCCCE
Confidence 99999999999999998653334567899999998 68999999999999999999975689999999999888877899
Q ss_pred EEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCC-CCCcccccceeeecC
Q 037516 276 AVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330 (330)
Q Consensus 276 av~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~-~~~Cgi~~~~~yp~~ 330 (330)
||+|||||+++|++|||||||||++|||+|||||+|+.++ .|.|||+++++||++
T Consensus 160 aV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 215 (218)
T 1yal_A 160 AVTAVGYGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPFK 215 (218)
T ss_dssp EEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCEEEEC
T ss_pred EEEEEEeeccCCccEEEEEeCCCCCcccCcEEEEECCCCCCCCccccccceeeEEE
Confidence 9999999999999999999999999999999999998643 488999999999985
No 16
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=1e-67 Score=490.51 Aligned_cols=259 Identities=28% Similarity=0.547 Sum_probs=209.3
Q ss_pred HHHHHHHHhhcCCCceEEEcccCCCCCHHHHHHhhcccCCCCCCcccccccccccccCCCCCCCCCCCeeecCCC----C
Q 037516 53 NFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYPDSRRGLPRSIDWRAR----G 128 (330)
Q Consensus 53 n~~~I~~~N~~~~~s~~~g~N~fsDlt~eE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~----g 128 (330)
+.++|++||++ +.+|++|+| |+|+|.||++. +++.++... .. ...+.... ..+||++||||++ +
T Consensus 11 ~~~~i~~~N~~-~~~~~~~~n-f~~~~~e~~~~-~lg~~~~~~---~~-----~~~~~~~~-~~~lP~s~DwR~~~~~c~ 78 (317)
T 3pbh_A 11 SDELVNYVNKR-NTTWQAGHN-FYNVDMSYLKR-LCGTFLGGP---KP-----PQRVMFTE-DLKLPASFDAREQWPQCP 78 (317)
T ss_dssp CHHHHHHHHHH-TCSEEECCC-CSSCCHHHHHH-TCCBCTTCC---CC-----SEEECCCS-CCCCCSSEEHHHHCTTCG
T ss_pred cHHHHHHHHCC-CCCeEEeec-cccCCHHHHHH-HcCCCCCcc---cc-----Cccccccc-ccCCCCCEechhccCCCC
Confidence 46789999986 789999999 99999888765 455544321 11 11111111 2379999999987 6
Q ss_pred CCCccCCCCCCcchHHHHHHHHHHHHHHHhcCC--ccccChhhhhcCCC-C--CCCCCCChHHHHHHHHHcCCCCCCCCC
Q 037516 129 AVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGR--LISLSEQQVLDCSG-S--RGCYGGWMDDAFSYIIRSQGLTDERVY 203 (330)
Q Consensus 129 ~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~--~~~lS~q~l~dc~~-~--~gC~GG~~~~a~~~~~~~~Gi~~e~~y 203 (330)
.|+||||||.||||||||++++||++++|+++. .+.||+|+|+||+. . .||+||++..|++|++++ ||++|++|
T Consensus 79 ~vtpVkdQg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~~-Gi~te~~Y 157 (317)
T 3pbh_A 79 TIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRK-GLVSGGLY 157 (317)
T ss_dssp GGTCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHHT-CEEBBCST
T ss_pred CcCCccccCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHHh-CCCcchhc
Confidence 899999999999999999999999999999874 79999999999987 3 899999999999999998 99999888
Q ss_pred -------cccC---------CCCcccCCc--CC-----cccE---------EeeeeeecCCcHHHHHHHHh-cCCeEEEE
Q 037516 204 -------PYQR---------REGYCNWQR--GA-----MKAA---------RIRSYQDVPTSELALRYAVS-RQPVSVAI 250 (330)
Q Consensus 204 -------PY~~---------~~~~c~~~~--~~-----~~~~---------~i~~~~~v~~~~~~i~~~l~-~gPv~v~~ 250 (330)
||.. ..+.|.... .. ...+ .......++.++++|+++|+ +|||+|+|
T Consensus 158 ~~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~~~e~~i~~~i~~~GPV~v~i 237 (317)
T 3pbh_A 158 ESHVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAF 237 (317)
T ss_dssp TCCCBSSCCCSCCCCCCCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEECSCHHHHHHHHHHHCCEEEEE
T ss_pred cCCCCCcCcccCcccccccCcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccCCcHHHHHHHHHHHCCCEEEEE
Confidence 9984 345564210 00 0001 11122345568999999987 69999999
Q ss_pred eeCCCCcccccCCEEeCCCCC-CCCeEEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCCCCCcccccceeee
Q 037516 251 DASSPGFRYYSGGVFAGPCGN-NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYP 328 (330)
Q Consensus 251 ~~~~~~f~~y~~Gi~~~~~~~-~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~Cgi~~~~~yp 328 (330)
+++ ++|++|++|||..+|+. .++|||+|||||+++|++|||||||||++|||+|||||+|+. |.|||++.++.+
T Consensus 238 ~~~-~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~GY~ri~rg~---n~CgI~~~~~a~ 312 (317)
T 3pbh_A 238 SVY-SDFLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQ---DHCGIESEVVAG 312 (317)
T ss_dssp EEE-GGGGGEEEEEECCCSCCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS---CGGGTTTSCEEC
T ss_pred Eec-ccccCCCCcEEccCCCCCCCCEEEEEEEEEEeCCeeEEEEEcCCCCCcCCCcEEEEEcCC---CcccCCCceEee
Confidence 998 79999999999998765 459999999999999999999999999999999999999996 679999988754
No 17
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=2.4e-67 Score=463.52 Aligned_cols=211 Identities=53% Similarity=1.062 Sum_probs=195.8
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCCC-CCCCCCChHHHHHHHHHcCC
Q 037516 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS-RGCYGGWMDDAFSYIIRSQG 196 (330)
Q Consensus 118 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~gC~GG~~~~a~~~~~~~~G 196 (330)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||+.. .||+||++..|++|+++++|
T Consensus 1 lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~~~~G 80 (215)
T 1iwd_A 1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTASHGCNGGWMNNAFQYIITNGG 80 (215)
T ss_dssp CCSCEEGGGGTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHHTC
T ss_pred CCCcEeCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcCCCCCCCCCCHHHHHHHHHHhCC
Confidence 79999999999999999999999999999999999999999999999999999999864 89999999999999998779
Q ss_pred CCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-CcHHHHHHHHhcCCeEEEEeeCCCCcccccCCEEeCCCCCCCCe
Q 037516 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNH 275 (330)
Q Consensus 197 i~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~Gi~~~~~~~~~~H 275 (330)
+++|++|||.+.++.|.... ...+++++|..++ .++++|+++|++|||+++|++...+|+.|++|||..+|+..++|
T Consensus 81 i~~e~~yPY~~~~~~C~~~~--~~~~~i~~~~~v~~~~~~~ik~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~~~H 158 (215)
T 1iwd_A 81 IDTQQNYPYSAVQGSCKPYR--LRVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTAQNH 158 (215)
T ss_dssp BCBTTTSCCCSSCCCCCTTC--CCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCCCCCE
T ss_pred cccccccCccCCCCCCCCCC--CceEEeCcEEEeCCCcHHHHHHHHHhCCEEEEEecCCcchhhcCCceECCCCCCcCCE
Confidence 99999999999999998763 3567899999887 68899999999999999999984479999999999888888899
Q ss_pred EEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCC-CCCcccccceeeecC
Q 037516 276 AVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330 (330)
Q Consensus 276 av~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~-~~~Cgi~~~~~yp~~ 330 (330)
||+|||||++++++|||||||||++|||+|||||+|+.+. .|.|||+++++||++
T Consensus 159 aV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 214 (215)
T 1iwd_A 159 GVVIVGYGTQSGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTK 214 (215)
T ss_dssp EEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred EEEEEEEeccCCccEEEEEeCCCCCcCCCcEEEEEcCCCCCCCCCCccccceeeee
Confidence 9999999999999999999999999999999999998643 478999999999985
No 18
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=5e-67 Score=462.00 Aligned_cols=210 Identities=50% Similarity=0.952 Sum_probs=194.8
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCCC-CCCCCCChHHHHHHHHHcCC
Q 037516 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS-RGCYGGWMDDAFSYIIRSQG 196 (330)
Q Consensus 118 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~gC~GG~~~~a~~~~~~~~G 196 (330)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||+.. .||+||++..|++|+++++|
T Consensus 1 lP~~~Dwr~~~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~~~G 80 (215)
T 3kwz_A 1 APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRG 80 (215)
T ss_dssp CTTCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHHTC
T ss_pred CCCCCccCcCCCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcCCCCCCCCCCHHHHHHHHHHhCC
Confidence 79999999999999999999999999999999999999999999999999999999954 89999999999999988879
Q ss_pred CCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-CcHHHHHHHHh-cCCeEEEEeeCCCCcccccCCEEeCC-CC-CC
Q 037516 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVS-RQPVSVAIDASSPGFRYYSGGVFAGP-CG-NN 272 (330)
Q Consensus 197 i~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~-~gPv~v~~~~~~~~f~~y~~Gi~~~~-~~-~~ 272 (330)
+++|++|||.+.++.|... ......++++|..++ .++++||++|+ +|||+++|++..++|++|++|||..+ |+ ..
T Consensus 81 i~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~ 159 (215)
T 3kwz_A 81 IDSEDAYPYVGQEESCMYN-PTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDN 159 (215)
T ss_dssp EEBTTTSCCCSSCCCCCCC-GGGEEECCCCEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCTTC
T ss_pred ccccccCCCccCCCccccC-CCCceeEecceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhhhcccCCeECCCCCCCCh
Confidence 9999999999999999876 344567889999998 58999999998 59999999998568999999999887 74 57
Q ss_pred CCeEEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCCCCCcccccceeeecC
Q 037516 273 LNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330 (330)
Q Consensus 273 ~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~Cgi~~~~~yp~~ 330 (330)
++|||+|||||++++++|||||||||++|||+|||||+|+.+ |.|||+++++||++
T Consensus 160 ~~HaV~iVGyg~~~g~~yWivkNSWG~~WG~~Gy~~i~r~~~--n~Cgi~~~~~~p~~ 215 (215)
T 3kwz_A 160 LNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKN--NACGIANLASFPKM 215 (215)
T ss_dssp CCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSSS--SGGGTTSSCEEECC
T ss_pred hhCEEEEEEEeccCCceEEEEECCcCcccccCCEEEEecCCC--CccCcCCceeeeeC
Confidence 899999999999999999999999999999999999999964 78999999999986
No 19
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=7.2e-67 Score=464.70 Aligned_cols=214 Identities=52% Similarity=1.024 Sum_probs=196.2
Q ss_pred CCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCC--CCCCCCCChHHHHHHHHHc
Q 037516 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSYIIRS 194 (330)
Q Consensus 117 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~--~~gC~GG~~~~a~~~~~~~ 194 (330)
+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+. ..||+||++..|++|++++
T Consensus 1 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~ 80 (229)
T 1s4v_A 1 TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQR 80 (229)
T ss_dssp CCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCTTBCBCHHHHHHHHHHH
T ss_pred CCCCCEeCCCCCCCCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCCCCCCCCCCCCHHHHHHHHHHh
Confidence 48999999999999999999999999999999999999999999999999999999985 3899999999999999987
Q ss_pred CCCCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-CcHHHHHHHHhcCCeEEEEeeCCCCcccccCCEEeCCCCCCC
Q 037516 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNL 273 (330)
Q Consensus 195 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~Gi~~~~~~~~~ 273 (330)
+|+++|++|||.+.++.|.........+++++|..++ .+++.|+++|++|||+++|++..++|++|++|||..+|+..+
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~c~~~~ 160 (229)
T 1s4v_A 81 GGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTEL 160 (229)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHHHTCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCCCC
T ss_pred CCccccccCCccCCCCCCCCCCCCCcEEEeeeEEEeCCccHHHHHHHHhcCCEEEEEEeCcHHHhhCCCcEECCCCCCCC
Confidence 7999999999999999998642233567899999998 688999999999999999999546899999999998888888
Q ss_pred CeEEEEEEeeccC-CcCeEEEECCCCCCccCCceEEEEecCCC-CCCcccccceeeecC
Q 037516 274 NHAVTIVGYGSSN-EGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330 (330)
Q Consensus 274 ~Hav~iVGyg~~~-g~~ywivkNSWG~~WG~~Gy~~i~~~~~~-~~~Cgi~~~~~yp~~ 330 (330)
+|||+|||||+++ |++|||||||||++|||+|||||+|+.++ .|.|||+++++||++
T Consensus 161 ~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 219 (229)
T 1s4v_A 161 DHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIK 219 (229)
T ss_dssp CEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred CeEEEEEEeccccCCCCEEEEEeCCCCCccCCcEEEEEcCCCCCCCcCcccccceeeEe
Confidence 9999999999986 89999999999999999999999999643 489999999999974
No 20
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=2e-66 Score=456.72 Aligned_cols=208 Identities=49% Similarity=0.974 Sum_probs=192.0
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCC-CCCCCCCChHHHHHHHHHcCC
Q 037516 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQG 196 (330)
Q Consensus 118 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~-~~gC~GG~~~~a~~~~~~~~G 196 (330)
||++||||++|+|+||||||.||||||||+++++|++++++++..++||||+|+||+. ..||+||++..|++|++++ |
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~yi~~~-G 79 (212)
T 2cio_A 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDRRSYGCNGGYPWSALQLVAQY-G 79 (212)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHT-C
T ss_pred CCCcccCCCCCCCCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCCCCCCCCCCCHHHHHHHHHHh-C
Confidence 7999999999999999999999999999999999999999999999999999999985 3899999999999999988 8
Q ss_pred CCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-CcHHHHHHHHhcCCeEEEEeeCCCCcccccCCEEeCCCCCCCCe
Q 037516 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNH 275 (330)
Q Consensus 197 i~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~Gi~~~~~~~~~~H 275 (330)
+++|++|||.+.++.|.........+++++|..++ .++++|+++|++|||+++|++...+|++|++|||..+|+..++|
T Consensus 80 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~~~~~~H 159 (212)
T 2cio_A 80 IHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVDH 159 (212)
T ss_dssp BCBTTTSCCCSSCCCCCTTTTCSCSBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSCCCE
T ss_pred cCcccccCCcCCCCCcCCCCCCCceEEEeeEEEeCCccHHHHHHHHHhCCEEEEEeccCcchhhcCCceecCCCCCCCCE
Confidence 99999999999999998763234567899999998 68999999999999999999984489999999999888888899
Q ss_pred EEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCC-CCCcccccceeeecC
Q 037516 276 AVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330 (330)
Q Consensus 276 av~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~-~~~Cgi~~~~~yp~~ 330 (330)
||+|||||+ +|||||||||++|||+|||||+|+.+. .|.|||+++++||++
T Consensus 160 aV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (212)
T 2cio_A 160 AVAAVGYGP----NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 211 (212)
T ss_dssp EEEEEEEET----TEEEEECSBCTTSTBTTEEEEECSSSCTTCGGGTTSCCEEEEC
T ss_pred EEEEEEecC----CeEEEEeCCCCCcccCcEEEEEcCCCCCCCccCcccceeEEEe
Confidence 999999998 899999999999999999999999643 488999999999985
No 21
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=4.9e-67 Score=463.96 Aligned_cols=211 Identities=50% Similarity=0.974 Sum_probs=191.3
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCCC-CCCCCCChHHHHHHHHHcCC
Q 037516 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS-RGCYGGWMDDAFSYIIRSQG 196 (330)
Q Consensus 118 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~gC~GG~~~~a~~~~~~~~G 196 (330)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. .||+||++..|++|+++++|
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~~~~G 80 (222)
T 3u8e_A 1 APASIDWRKKGAVTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDTXXXXXXGGDADDAFRWVITNGG 80 (222)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC------CCCHHHHHHHHHHHTC
T ss_pred CCCcCcCCcCCCCCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccCcccccCCCCHHHHHHHHHHcCC
Confidence 79999999999999999999999999999999999999999999999999999999985 89999999999999998889
Q ss_pred CCCCCCCcccCCCCcccCCcCCcccEEeeeeeecCCcHHHHHHHHhcCCeEEEEeeCCCCcccccC-CEEeC-CCCC---
Q 037516 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSRQPVSVAIDASSPGFRYYSG-GVFAG-PCGN--- 271 (330)
Q Consensus 197 i~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~-Gi~~~-~~~~--- 271 (330)
+++|++|||.+.++.|...... .+++.+|..++.++++|+++|.+|||+++|+++..+|++|++ |||.. +|+.
T Consensus 81 i~~e~~yPY~~~~~~C~~~~~~--~~~i~~~~~v~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~~Giy~~~~~~~~~~ 158 (222)
T 3u8e_A 81 IASDANYPYTGVDGTCDLNKPI--AARIDGYTNVPNSSSALLDAVAKQPVSVNIYTSSTSFQLYTGPGIFAGSSCSDDPA 158 (222)
T ss_dssp BCBTTTSCCCSSCCCCCCCSCC--CBCCCEEEECCSCHHHHHHHHHHSCEEEEECCCSHHHHTCCCSSCBCCTTCCCCGG
T ss_pred ccchhcCCCcccCCccccCCCC--eEEEccEEEeCCcHHHHHHHHhCCCEEEEEEecChhhhcEeCCceECCCcccCCCC
Confidence 9999999999999999876332 778999999987899999999899999999998458999999 99998 4875
Q ss_pred CCCeEEEEEEeeccC-CcCeEEEECCCCCCccCCceEEEEecCCC-CCCcccccceeeecC
Q 037516 272 NLNHAVTIVGYGSSN-EGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330 (330)
Q Consensus 272 ~~~Hav~iVGyg~~~-g~~ywivkNSWG~~WG~~Gy~~i~~~~~~-~~~Cgi~~~~~yp~~ 330 (330)
.++|||+|||||+++ +++|||||||||++|||+|||||+|+.+. .|.|||+++++||++
T Consensus 159 ~~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi~~~~~~p~~ 219 (222)
T 3u8e_A 159 TVDHTVLIVGYGSNGTNADYWIVKNSWGTEWGIDGYILIRRNTNRPDGVCAIDAWGSYPTK 219 (222)
T ss_dssp GCCEEEEEEEEEESSTTCEEEEEECSBCTTSTBTTEEEEECSCSCTTCGGGTTSSCEEEEC
T ss_pred cCCEEEEEEEEeecCCCCcEEEEECCCCCCcccCCEEEEEcCCCCCCCcCCccccceEEEE
Confidence 689999999999987 89999999999999999999999999853 459999999999985
No 22
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=8.8e-67 Score=461.36 Aligned_cols=210 Identities=50% Similarity=0.983 Sum_probs=194.6
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCC-C---CCCCCCCChHHHHHHHHH
Q 037516 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCS-G---SRGCYGGWMDDAFSYIIR 193 (330)
Q Consensus 118 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~-~---~~gC~GG~~~~a~~~~~~ 193 (330)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+ . ..+|+||++..|++|+.+
T Consensus 2 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~~~~~~ 81 (218)
T 3ovx_A 2 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIID 81 (218)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999999 2 389999999999999987
Q ss_pred cCCCCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-CcHHHHHHHHhc-CCeEEEEeeCCCCcccccCCEEeCC-CC
Q 037516 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSR-QPVSVAIDASSPGFRYYSGGVFAGP-CG 270 (330)
Q Consensus 194 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~~-gPv~v~~~~~~~~f~~y~~Gi~~~~-~~ 270 (330)
+.|+++|++|||.+.++.|... ......++.+|..++ .++++||++|++ |||+++|++..++|++|++|||..+ |.
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~ 160 (218)
T 3ovx_A 82 NKGIDSDASYPYKAMDQKCQYD-SKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCT 160 (218)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCC-GGGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHHCCSSEECCTTCC
T ss_pred hCCcCcccccCccCCCCcccCC-CccceeeeccEEEeCCCCHHHHHHHHHhcCCEEEEEEecchhhhcccCceecCCCCC
Confidence 5699999999999999999876 344567889999997 689999999985 9999999998568999999999987 87
Q ss_pred CCCCeEEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCCCCCcccccceeeecC
Q 037516 271 NNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330 (330)
Q Consensus 271 ~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~Cgi~~~~~yp~~ 330 (330)
..++|||+|||||++++++|||||||||++|||+|||||+|+.+ |.|||+++++||++
T Consensus 161 ~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~--n~cgi~~~~~~p~~ 218 (218)
T 3ovx_A 161 QNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKG--NHCGIASFPSYPEI 218 (218)
T ss_dssp SCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSS--SGGGTTTSCEEEEC
T ss_pred cccCcEEEEEEEeccCCceEEEEECCCCCccccCCEEEEecCCC--CcccccCceeeeeC
Confidence 78999999999999999999999999999999999999999863 78999999999986
No 23
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=7.7e-67 Score=471.81 Aligned_cols=214 Identities=54% Similarity=1.044 Sum_probs=197.5
Q ss_pred CCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCC--CCCCCCCChHHHHHHHHHc
Q 037516 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG--SRGCYGGWMDDAFSYIIRS 194 (330)
Q Consensus 117 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~--~~gC~GG~~~~a~~~~~~~ 194 (330)
+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+. ..||+||++..|++|++++
T Consensus 3 ~lP~~~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~~yi~~~ 82 (262)
T 2fo5_A 3 DLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNN 82 (262)
T ss_dssp CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCGGGCBCHHHHHHHHHHT
T ss_pred CCCCcccCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCCCCCCCCCCCHHHHHHHHHHc
Confidence 79999999999999999999999999999999999999999999999999999999986 3899999999999999987
Q ss_pred CCCCCCCCCcccCCCCcccCCc--CCcc-cEEeeeeeecC-CcHHHHHHHHhcCCeEEEEeeCCCCcccccCCEEeCCCC
Q 037516 195 QGLTDERVYPYQRREGYCNWQR--GAMK-AARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCG 270 (330)
Q Consensus 195 ~Gi~~e~~yPY~~~~~~c~~~~--~~~~-~~~i~~~~~v~-~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~Gi~~~~~~ 270 (330)
+|+++|++|||.+.++.|.... .... .++|++|..++ .++++|+++|++|||+++|+++.++|++|++|||..+|+
T Consensus 83 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~i~~y~~v~~~~e~~ik~al~~GPV~v~i~~~~~~f~~Y~sGVy~~~c~ 162 (262)
T 2fo5_A 83 GGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGECG 162 (262)
T ss_dssp TCEEBTTTSCCCSSCCCCCHHHHHHHCCCEECCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCC
T ss_pred CCcCchhcCCCcCccCccCCcccccCCceeEEeceEEEcCCchHHHHHHHHHhCCEEEEEecChHHHhccCCceECCCCC
Confidence 7999999999999999998652 1234 67899999998 688999999999999999999756899999999998898
Q ss_pred CCCCeEEEEEEeecc-CCcCeEEEECCCCCCccCCceEEEEecCCC-CCCcccccceeeecC
Q 037516 271 NNLNHAVTIVGYGSS-NEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330 (330)
Q Consensus 271 ~~~~Hav~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~-~~~Cgi~~~~~yp~~ 330 (330)
...+|||+|||||++ +|++|||||||||++|||+|||||+|+.++ .|.|||++.++||++
T Consensus 163 ~~~~HaV~IVGyg~~~~G~~YWivkNSWG~~WGe~GY~ri~r~~n~~~~~CgI~~~~~~p~~ 224 (262)
T 2fo5_A 163 TELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVK 224 (262)
T ss_dssp CCCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEESSCSCTTCGGGTTTSCEEEEC
T ss_pred CcCCEEEEEEEEcccCCCceEEEEEeCCCCCCCCCeEEEEEcCCCCCCCccceeeeeeEEEe
Confidence 888999999999998 589999999999999999999999999865 688999999999974
No 24
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=2e-66 Score=457.22 Aligned_cols=208 Identities=49% Similarity=0.970 Sum_probs=192.4
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCCC-CCCCCCChHHHHHHHHHcCC
Q 037516 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS-RGCYGGWMDDAFSYIIRSQG 196 (330)
Q Consensus 118 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~gC~GG~~~~a~~~~~~~~G 196 (330)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||||+|+||+.. .||+||++..|++|++++ |
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~~~-G 79 (213)
T 3ioq_A 1 IPTSIDWRQKGAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCERRSYGCRGGFPLYALQYVANS-G 79 (213)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHH-C
T ss_pred CCCCCCcccCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcCCCCCCCCCCHHHHHHHHHHc-C
Confidence 79999999999999999999999999999999999999999999999999999999975 899999999999999999 9
Q ss_pred CCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-CcHHHHHHHHhcCCeEEEEeeCCCCcccccCCEEeCCCCCCCCe
Q 037516 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNH 275 (330)
Q Consensus 197 i~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~Gi~~~~~~~~~~H 275 (330)
+++|++|||.+.++.|.........+++.+|..++ .+++.+++++.+|||+++|+++.++|+.|++|||..+|+..++|
T Consensus 80 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~~~~~~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~H 159 (213)
T 3ioq_A 80 IHLRQYYPYEGVQRQCRASQAKGPKVKTDGVGRVPRNNEQALIQRIAIQPVSIVVEAKGRAFQNYRGGIFAGPCGTSIDH 159 (213)
T ss_dssp EEBGGGSCCCSSCCCCCGGGCCSCEECCCEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSCCCE
T ss_pred CCchhccCcCCCCCCCCCCccCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEEechhhhhhccCCeEcCCCCCccCc
Confidence 99999999999999998753445677899999998 66777888888999999999986689999999999988888999
Q ss_pred EEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCC-CCCcccccceeeecC
Q 037516 276 AVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330 (330)
Q Consensus 276 av~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~-~~~Cgi~~~~~yp~~ 330 (330)
||+|||||+ +|||||||||++|||+|||||+|+.+. .|.|||+++++||++
T Consensus 160 aV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 211 (213)
T 3ioq_A 160 AVAAVGYGN----DYILIKNSWGTGWGEGGYIRIKRGSGNPQGACGVLSDSVFPTK 211 (213)
T ss_dssp EEEEEEEET----TEEEEECSBCTTSTBTTEEEEESSCSSTTCGGGTTSCCEEEEC
T ss_pred eEEEEecCC----CeEEEECCCCCCcccCCeEEEEcCCCCCCCcccccCcceEeEe
Confidence 999999997 899999999999999999999999743 489999999999985
No 25
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=4.3e-66 Score=455.18 Aligned_cols=208 Identities=51% Similarity=1.041 Sum_probs=192.6
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCC-CCCCCCCChHHHHHHHHHcCC
Q 037516 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQG 196 (330)
Q Consensus 118 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~-~~gC~GG~~~~a~~~~~~~~G 196 (330)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+. ..||+||++..|++|++++ |
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~~~-G 79 (214)
T 2bdz_A 1 YPESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCERRSHGCDGGYQTTSLQYVVDN-G 79 (214)
T ss_dssp CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHH-C
T ss_pred CCCcEeCCCCCCCCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCCCHHHHHHHHHHh-C
Confidence 7999999999999999999999999999999999999999999999999999999985 3899999999999999999 9
Q ss_pred CCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-CcHHHHHHHHhcCCeEEEEeeCCCCcccccCCEEeCCCCCCCCe
Q 037516 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNH 275 (330)
Q Consensus 197 i~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~Gi~~~~~~~~~~H 275 (330)
+++|++|||.+.++.|.........+++++|..++ .++++|+++|++|||+++|++..++|++|++|||..+|+..++|
T Consensus 80 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~~H 159 (214)
T 2bdz_A 80 VHTEREYPYEKKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGTNTDH 159 (214)
T ss_dssp EEBTTTSCCCSSCCCCCTTTCCSCEECCCEEEEECSSBHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCSCCSCCCE
T ss_pred CCccccCCCCCCCCCCCCCCCCCceeeecCEEEeCCCcHHHHHHHHHhCCEEEEEeeChhHhhcccCceecCCCCCCCCe
Confidence 99999999999999998764334567899999887 68899999999999999999985689999999999989888999
Q ss_pred EEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCC-CCCcccccceeeecC
Q 037516 276 AVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330 (330)
Q Consensus 276 av~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~-~~~Cgi~~~~~yp~~ 330 (330)
||+|||||+ +|||||||||++|||+|||||+|+.+. .|.|||+++++||++
T Consensus 160 aV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (214)
T 2bdz_A 160 AVTAVGYGK----TYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPIK 211 (214)
T ss_dssp EEEEEEECS----SEEEEECSBCTTSTBTTEEEEECCCSBSSCGGGTTSCEEEEEC
T ss_pred EEEEEEcCC----CeEEEEeCCCCCcccCCEEEEEcCCCCCCCcccccccceEEEe
Confidence 999999998 899999999999999999999998643 478999999999985
No 26
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=4e-66 Score=457.64 Aligned_cols=210 Identities=50% Similarity=0.997 Sum_probs=192.3
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCC---CCCCCCCChHHHHHHHHHc
Q 037516 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYGGWMDDAFSYIIRS 194 (330)
Q Consensus 118 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~---~~gC~GG~~~~a~~~~~~~ 194 (330)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+. ..||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y~~~~ 80 (220)
T 2xu3_A 1 APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN 80 (220)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHHHHHh
Confidence 7999999999999999999999999999999999999999999999999999999986 3799999999999999744
Q ss_pred CCCCCCCCCcccCCCCcccCCcCCcccEEeeeeeecCCcHHHHHHHHh-cCCeEEEEeeCCCCcccccCCEEeCC-CCC-
Q 037516 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVS-RQPVSVAIDASSPGFRYYSGGVFAGP-CGN- 271 (330)
Q Consensus 195 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~i~~~l~-~gPv~v~~~~~~~~f~~y~~Gi~~~~-~~~- 271 (330)
.|+++|++|||.+.++.|+... ....+++++|..++.++++||++|+ +|||+++|++..++|++|++|||..+ |+.
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~~Gvy~~~~c~~~ 159 (220)
T 2xu3_A 81 GGLDSEESYPYEATEESCKYNP-KYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSE 159 (220)
T ss_dssp TCEEBTTTSCCCSSCCCCCCCG-GGEEECCSEEEECCSCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCSS
T ss_pred CCcccccccCCcccCcCccCCC-CCcceeeeeEEEeCCCHHHHHHHHHhcCCEEEEEeecCcccccccceEEcCCCCCCC
Confidence 5999999999999999998763 3456789999988778999999998 59999999998558999999999987 874
Q ss_pred CCCeEEEEEEee----ccCCcCeEEEECCCCCCccCCceEEEEecCCCCCCcccccceeeecC
Q 037516 272 NLNHAVTIVGYG----SSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330 (330)
Q Consensus 272 ~~~Hav~iVGyg----~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~Cgi~~~~~yp~~ 330 (330)
.++|||+||||| ++++++|||||||||++|||+|||||+|+.+ |.|||+++++||++
T Consensus 160 ~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WG~~Gy~~i~~~~~--n~Cgi~~~~~~p~~ 220 (220)
T 2xu3_A 160 DMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR--NHCGIASAASYPTV 220 (220)
T ss_dssp CCCEEEEEEEEEECCCSSSCCEEEEEECSBCTTSTBTTEEEEECSSS--SGGGTTTSCEEEEC
T ss_pred CCCeEEEEEEcCCccccCCCCcEEEEEeCCCCCcccCcEEEEecCCC--CcCCccccceeeeC
Confidence 789999999999 6678899999999999999999999999863 78999999999985
No 27
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=6.7e-66 Score=452.01 Aligned_cols=205 Identities=57% Similarity=1.063 Sum_probs=189.8
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCCC-CCCCCCChHHHHHHHHHcCC
Q 037516 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS-RGCYGGWMDDAFSYIIRSQG 196 (330)
Q Consensus 118 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~gC~GG~~~~a~~~~~~~~G 196 (330)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||||+|+||+.. .||+||++..|++|+++++|
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~~~~G 80 (208)
T 1o0e_A 1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKKNHGCLGGAFVFAYQYIINNGG 80 (208)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHHTC
T ss_pred CCCcCcCCCCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcCCCCCCCCCCHHHHHHHHHHhCC
Confidence 79999999999999999999999999999999999999999999999999999999853 89999999999999998779
Q ss_pred CCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-CcHHHHHHHHhcCCeEEEEeeCCCCcccccCCEEeCCCCCCCCe
Q 037516 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNH 275 (330)
Q Consensus 197 i~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~Gi~~~~~~~~~~H 275 (330)
+++|++|||.+.++.|+. ....+++++|..++ .++++|+++|++|||+++|++...+|++|++|||+.+|+..++|
T Consensus 81 i~~e~~yPY~~~~~~C~~---~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~~~H 157 (208)
T 1o0e_A 81 IDTQANYPYKAVQGPCQA---ASKVVSIDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGTKLNH 157 (208)
T ss_dssp BCBTTTSCCCSSCCCCCC---CCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSCCCE
T ss_pred cCcccccCccCCCCcCCC---CCceEEeCeEEEeCCCCHHHHHHHHHhCCEEEEEEccCcccccccCceECCCCCCcCCE
Confidence 999999999999999986 23467889999888 68899999999999999999984489999999999888888899
Q ss_pred EEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCCCCCcccccceeeecC
Q 037516 276 AVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330 (330)
Q Consensus 276 av~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~Cgi~~~~~yp~~ 330 (330)
||+|||||+ +|||||||||++|||+|||||+|+.+ .|.|||+++++||++
T Consensus 158 aV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~-~~~Cgi~~~~~~p~~ 207 (208)
T 1o0e_A 158 GVTIVGYQA----NYWIVRNSWGRYWGEKGYIRMLRVGG-CGLCGIARLPYYPTK 207 (208)
T ss_dssp EEEEEEECS----SEEEEECSBCTTSTBTTEEEEECCST-TCGGGTTSSCEEEEC
T ss_pred EEEEEEeCC----CeEEEEcCCCCcccCCcEEEEEcCCC-CCcCCCcccceeeec
Confidence 999999998 89999999999999999999999863 278999999999985
No 28
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=1.4e-65 Score=452.47 Aligned_cols=207 Identities=41% Similarity=0.797 Sum_probs=187.3
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCCC-CCCCCCChHHHHHHHHHc--
Q 037516 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS-RGCYGGWMDDAFSYIIRS-- 194 (330)
Q Consensus 118 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~gC~GG~~~~a~~~~~~~-- 194 (330)
||++||||++|+|+||||||.||||||||++++||++++++++..++||||+|+||+.. .||+||++..|++|++++
T Consensus 1 lP~~~Dwr~~g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~~~~~ 80 (215)
T 3i06_A 1 APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENN 80 (215)
T ss_dssp CCSEEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCSSSCGGGCCCHHHHHHHHHHHST
T ss_pred CCCcccCCcCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCCCCCCCCCCCHHHHHHHHHHhcc
Confidence 79999999999999999999999999999999999999999999999999999999865 899999999999999985
Q ss_pred CCCCCCCCCcccCCCC---cccCCcCCcccEEeeeeeecCCcHHHHHHHHh-cCCeEEEEeeCCCCcccccCCEEeCCCC
Q 037516 195 QGLTDERVYPYQRREG---YCNWQRGAMKAARIRSYQDVPTSELALRYAVS-RQPVSVAIDASSPGFRYYSGGVFAGPCG 270 (330)
Q Consensus 195 ~Gi~~e~~yPY~~~~~---~c~~~~~~~~~~~i~~~~~v~~~~~~i~~~l~-~gPv~v~~~~~~~~f~~y~~Gi~~~~~~ 270 (330)
+|+++|++|||...++ .|... .....+++++|..++.++++|+++|+ +|||+++|++. +|++|++|||...+.
T Consensus 81 gGi~~e~~yPY~~~~~~~~~C~~~-~~~~~~~i~~~~~v~~~~~~ik~~l~~~gPV~v~~~~~--~f~~Y~~Giy~~~~~ 157 (215)
T 3i06_A 81 GAVYTEDSYPYASGEGISPPCTTS-GHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDAS--SWMTYTGGVMTSCVS 157 (215)
T ss_dssp TEEEC-CCSCCCCTTSCCCCCCCS-SCCEEEEEEEEEECCSCHHHHHHHHHHHCCEEEEECCT--TGGGCCSSEECSCCC
T ss_pred ccccccCccCCcCCCCCCCccccC-CcccceEecceEEeCChHHHHHHHHHHCCCEEEEEEch--HHhcCCCCcccCCCC
Confidence 5799999999987554 68765 23456789999999888999999998 69999999984 899999999986334
Q ss_pred CCCCeEEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCCCCCcccccceeeecC
Q 037516 271 NNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330 (330)
Q Consensus 271 ~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~Cgi~~~~~yp~~ 330 (330)
..++|||+|||||++++++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 158 ~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~rg~---n~cgi~~~~~~~~~ 214 (215)
T 3i06_A 158 EQLDHGVLLVGYNDSAAVPYWIIKNSWTTQWGEEGYIRIAKGS---NQCLVKEEASSAVV 214 (215)
T ss_dssp SCCCEEEEEEEEESSSSSCEEEEECSBCTTSTBTTEEEEESSS---CGGGTTSSEEEEEE
T ss_pred CccCcEEEEEEEeccCCcEEEEEECCCCCCcccCceEEEecCC---CeecCCCceeEEec
Confidence 6779999999999999999999999999999999999999996 78999999999975
No 29
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=1.8e-65 Score=459.99 Aligned_cols=211 Identities=44% Similarity=0.916 Sum_probs=193.1
Q ss_pred CCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCC-CCCCCCCChHHHHHHHHHcC
Q 037516 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-SRGCYGGWMDDAFSYIIRSQ 195 (330)
Q Consensus 117 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~-~~gC~GG~~~~a~~~~~~~~ 195 (330)
+||++||||++|+|+||||||.||||||||+++++|++++++++..++||+|+|+||+. ..||+||++..|++|+++++
T Consensus 1 ~lP~~~DwR~~g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~~~~gC~GG~~~~a~~y~~~~~ 80 (246)
T 2b1m_A 1 DAPESWDWSKKGVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVDESEGCYNGWHYQSFEWVVKHG 80 (246)
T ss_dssp -CCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSBTTTBCCHHHHHHHHHHTT
T ss_pred CCCCcCCCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcCCCCCCCCCCHHHHHHHHHHhC
Confidence 48999999999999999999999999999999999999999999999999999999985 38999999999999999877
Q ss_pred CCCCCCCCcccCCCCcccCCcCCcccEEeeee---eecC-CcHHHHHHHHhc----CCeEEEEeeCCCCcccccCCEEeC
Q 037516 196 GLTDERVYPYQRREGYCNWQRGAMKAARIRSY---QDVP-TSELALRYAVSR----QPVSVAIDASSPGFRYYSGGVFAG 267 (330)
Q Consensus 196 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~---~~v~-~~~~~i~~~l~~----gPv~v~~~~~~~~f~~y~~Gi~~~ 267 (330)
|+++|++|||.+.++.|... .....+++++| ..++ .++++|+++|++ |||+++|++ ++|++|++|||..
T Consensus 81 Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~~~GPV~v~i~~--~~f~~Y~~Giy~~ 157 (246)
T 2b1m_A 81 GIASEADYPYKARDGKCKAN-EIQDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSIDA--KDFHFYSGGIYDG 157 (246)
T ss_dssp CBCBTTTSCCCSSCCCCCGG-GCCCCBCCSEEEEEECCTTSCHHHHHHHHHHHHHHSCEEEEECC--TTGGGCCSSEECC
T ss_pred CcCccccccccCCCCcCcCC-CCCCceeEcCcceeeecCCChHHHHHHHHHhhccCCCEEEEEEc--chhhcccceeecC
Confidence 99999999999999999875 23456788999 8887 688999999987 999999999 5899999999998
Q ss_pred C-CCCC--CCeEEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCC-CCCcccccceeeecC
Q 037516 268 P-CGNN--LNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330 (330)
Q Consensus 268 ~-~~~~--~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~-~~~Cgi~~~~~yp~~ 330 (330)
+ |+.. ++|||+|||||+++|++|||||||||++|||+|||||+|+.++ .|.|||++.++||++
T Consensus 158 ~~c~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~n~CgI~~~~~~p~~ 224 (246)
T 2b1m_A 158 GNCSSPYGINHFVLIVGYGSEDGVDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPII 224 (246)
T ss_dssp TTCCSSCCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCSSCTTCGGGTTSEEEEEEC
T ss_pred CCCCCCCcCceEEEEEEEeccCCceEEEEEeCCCCcccCCcEEEEEcCCCCCCccccccceeeEEEe
Confidence 4 8764 8999999999999999999999999999999999999998633 478999999999974
No 30
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=1.1e-65 Score=452.85 Aligned_cols=207 Identities=40% Similarity=0.785 Sum_probs=190.4
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCCC-CCCCCCChHHHHHHHHHcCC
Q 037516 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS-RGCYGGWMDDAFSYIIRSQG 196 (330)
Q Consensus 118 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~gC~GG~~~~a~~~~~~~~G 196 (330)
||++||||++|+|+||||||.||||||||++++||++++++++..++||||+|+||+.. .||+||++..|++|+++++|
T Consensus 1 lP~~~DwR~~~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~i~~~~G 80 (214)
T 1m6d_A 1 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGG 80 (214)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCSSSCTTBCCCHHHHHHHHHHHTC
T ss_pred CCCcCcCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcC
Confidence 79999999999999999999999999999999999999999999999999999999864 89999999999999998779
Q ss_pred CCCCCCCcccCCCCcccCCcCCcccEEeeeeeecCCcHHHHHHHHh-cCCeEEEEeeCCCCcccccCCEEeCC---CCC-
Q 037516 197 LTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVS-RQPVSVAIDASSPGFRYYSGGVFAGP---CGN- 271 (330)
Q Consensus 197 i~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~i~~~l~-~gPv~v~~~~~~~~f~~y~~Gi~~~~---~~~- 271 (330)
+++|++|||.+.+..|.... ....+++.++..++.++++||++|+ +|||+++|++. .|++|++|||..+ |+.
T Consensus 81 i~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~i~~~~~~ik~~l~~~GPV~v~i~~~--~f~~Y~~Giy~~~~~~c~~~ 157 (214)
T 1m6d_A 81 LETEDDYSYQGHMQSCQFSA-EKAKVYIQDSVELSQNEQKLAAWLAKRGPISVAINAF--GMQFYRHGISRPLRPLCSPW 157 (214)
T ss_dssp BCBTTTSCCCSSCCCCCCCG-GGCCBCCSEEEECCSCHHHHHHHHHHHCCEEEEECTH--HHHHCCSSEECCCGGGSCTT
T ss_pred cccccCcCcCCCCCcCCCCc-ccceEEecCEEEeChHHHHHHHHHHhCCCEEEEEEec--hhhhcCCceecCCCCcCCCC
Confidence 99999999999999998763 3345678888888878999999998 69999999997 5999999999863 664
Q ss_pred CCCeEEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCCCCCcccccceeeecC
Q 037516 272 NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330 (330)
Q Consensus 272 ~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~Cgi~~~~~yp~~ 330 (330)
.++|||+|||||+++|++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 158 ~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~---n~Cgi~~~~~~~~~ 213 (214)
T 1m6d_A 158 LIDHAVLLVGYGQRSDVPFWAIKNSWGTDWGEKGYYYLHRGS---GACGVNTMASSAVV 213 (214)
T ss_dssp CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSS---CGGGTTTTCEEEEC
T ss_pred cCCEEEEEEEEeecCCcEEEEEEeCCCCCcccCcEEEEEcCC---CccccCceeEEEEe
Confidence 689999999999999999999999999999999999999996 78999999999985
No 31
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=3.4e-66 Score=459.48 Aligned_cols=213 Identities=45% Similarity=0.963 Sum_probs=195.7
Q ss_pred CCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCC---CCCCCCCChHHHHHHHHH
Q 037516 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG---SRGCYGGWMDDAFSYIIR 193 (330)
Q Consensus 117 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~---~~gC~GG~~~~a~~~~~~ 193 (330)
+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+. ..+|+||++..|++|+++
T Consensus 6 ~lP~~~Dwr~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~~~~~~ 85 (224)
T 3f75_A 6 ELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVLD 85 (224)
T ss_dssp GSCSCEEHHHHTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHHHH
T ss_pred CCCCceecccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999986 389999999999999998
Q ss_pred cCCCCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-CcHHHHHHHHhcCCeEEEEeeCCCCcccccCCEEeCCCCCC
Q 037516 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNN 272 (330)
Q Consensus 194 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~Gi~~~~~~~~ 272 (330)
++|+++|++|||.+.++.|.... .....++.+|..++ .++++|+++|++|||+++|++..++|++|++|||+..|+..
T Consensus 86 ~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~~~~~~~~~l~~~l~~gPV~v~i~~~~~~f~~y~~Giy~~~~~~~ 164 (224)
T 3f75_A 86 SGGICSEDAYPYLARDEECRAQS-CEKVVKILGFKDVPRRSEAAMKAALAKSPVSIAIEADQMPFQFYHEGVFDASCGTD 164 (224)
T ss_dssp HTCBCBTTTSCCCSSCCCCCGGG-SCCCBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTEEEEEECCCCCCC
T ss_pred hCCccccccCCCcCCCCCCCcCC-CCceEEeccEEEeCCChHHHHHHHHcCCCEEEEEeccchhhhcCccceECCCCCCc
Confidence 55999999999999999998663 34556789999997 78999999999999999999985589999999999668888
Q ss_pred CCeEEEEEEeecc--CCcCeEEEECCCCCCccCCceEEEEecCCCCCCcccccceeeecC
Q 037516 273 LNHAVTIVGYGSS--NEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330 (330)
Q Consensus 273 ~~Hav~iVGyg~~--~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~Cgi~~~~~yp~~ 330 (330)
++|||+|||||++ ++++|||||||||++||++|||||+|+....|.|||+++++||++
T Consensus 165 ~~Hav~iVGyg~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~cgi~~~~~~p~~ 224 (224)
T 3f75_A 165 LDHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKGEEGQCGLLLDASFPVM 224 (224)
T ss_dssp CCEEEEEEEEEEETTTTEEEEEEECSBCTTSTBTTEEEEESCSCTTCGGGTTSSCEEEEC
T ss_pred cCeEEEEEEEecccCCCCCEEEEECCcCcchhhCCEEEEEcCCCCCCcCcccCceeeeeC
Confidence 9999999999998 789999999999999999999999998622378999999999986
No 32
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=1.7e-65 Score=459.22 Aligned_cols=210 Identities=40% Similarity=0.807 Sum_probs=192.9
Q ss_pred CCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCCC-CCCCCCChHHHHHHHHHcC
Q 037516 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS-RGCYGGWMDDAFSYIIRSQ 195 (330)
Q Consensus 117 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~gC~GG~~~~a~~~~~~~~ 195 (330)
+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+.. .||+||++..|++|+.++.
T Consensus 17 ~lP~~~DwR~~~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~~~~gC~GG~~~~a~~yi~~~~ 96 (241)
T 2oul_A 17 FDHAAYDWRLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSFKNYGCNGGLINNAFEDMIELG 96 (241)
T ss_dssp CCSSCEEGGGTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCTTSCTTBCBCHHHHHHHHHHTT
T ss_pred cCCCccccCcCCCCCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcCCCCCCCCCCHHHHHHHHHHhC
Confidence 799999999999999999999999999999999999999999999999999999999874 8999999999999999856
Q ss_pred CCCCCCCCcccCCCCc-ccCCcCCcccEEeeeeeecC-CcHHHHHHHHhcCCeEEEEeeCCCCcccccCCEEeCCCCCCC
Q 037516 196 GLTDERVYPYQRREGY-CNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNL 273 (330)
Q Consensus 196 Gi~~e~~yPY~~~~~~-c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~Gi~~~~~~~~~ 273 (330)
|+++|++|||.+.++. |+... ....+++++|..++ .++++||++| |||+++|++. ++|+.|++|||..+|+..+
T Consensus 97 Gi~~e~~yPY~~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~Y~~Giy~~~c~~~~ 172 (241)
T 2oul_A 97 GICPDGDYPYVSDAPNLCNIDR-CTEKYGIKNYLSVPDNKLKEALRFL--GPISISVAVS-DDFAFYKEGIFDGECGDQL 172 (241)
T ss_dssp SBCBTTSSCCCTTSCCCCCTTS-SSCCBCCSEEEECCTTCHHHHHHHT--CCEEEEECBC-HHHHTCCSSBCCSCBCSSC
T ss_pred CcCccccCCCcCCCCCcCCCCC-CccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-cchhhcCCcEEcCcCCCCC
Confidence 9999999999998888 98752 34567899999898 6889999999 9999999997 7899999999998887669
Q ss_pred CeEEEEEEeeccC----------CcCeEEEECCCCCCccCCceEEEEecCCC-CCCcccccceeeecC
Q 037516 274 NHAVTIVGYGSSN----------EGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330 (330)
Q Consensus 274 ~Hav~iVGyg~~~----------g~~ywivkNSWG~~WG~~Gy~~i~~~~~~-~~~Cgi~~~~~yp~~ 330 (330)
+|||+|||||+++ +++|||||||||++|||+|||||+|+.++ .+.|||+++++||++
T Consensus 173 ~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 240 (241)
T 2oul_A 173 NHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAFIPLI 240 (241)
T ss_dssp CEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCGGGTTSSEEEEEC
T ss_pred CEEEEEEEeccccccccccccCCCCCEEEEEeCCCCCcccCCEEEEEcCCCCCCCcCCccceEEEEee
Confidence 9999999999985 78999999999999999999999999753 344999999999985
No 33
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=1.3e-65 Score=454.49 Aligned_cols=207 Identities=43% Similarity=0.901 Sum_probs=192.1
Q ss_pred CCCeeecCCCC-CCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCCC---CCCCCCChHHHHHHHHH
Q 037516 118 LPRSIDWRARG-AVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---RGCYGGWMDDAFSYIIR 193 (330)
Q Consensus 118 lP~~~Dwr~~g-~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~---~gC~GG~~~~a~~~~~~ 193 (330)
||++||||++| +|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. .||+||++..|++|+++
T Consensus 1 lP~~~DwR~~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~ 80 (220)
T 8pch_A 1 YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRY 80 (220)
T ss_dssp CCSCEEHHHHSSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCEecCcCCCcCCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHHHHHH
Confidence 79999999999 899999999999999999999999999999999999999999999853 89999999999999998
Q ss_pred cCCCCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-CcHHHHHHHHh-cCCeEEEEeeCCCCcccccCCEEeCC-CC
Q 037516 194 SQGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVS-RQPVSVAIDASSPGFRYYSGGVFAGP-CG 270 (330)
Q Consensus 194 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~-~gPv~v~~~~~~~~f~~y~~Gi~~~~-~~ 270 (330)
++|+++|++|||.+.++.|...+ .....++++|..++ .++++|+++|+ +|||+++|++. ++|+.|++|||..+ |.
T Consensus 81 ~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~-~~f~~Y~~Giy~~~~~~ 158 (220)
T 8pch_A 81 NKGIMGEDTYPYKGQDDHCKFQP-DKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVT-NDFLMYRKGIYSSTSCH 158 (220)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCCG-GGEEECEEEEEECCTTCHHHHHHHHHHTCCEEEEECCC-HHHHTCCSSEECCSSCC
T ss_pred cCCcCcccccCccCCCCCCCCCC-CcceEEeCCEEEeCCCCHHHHHHHHHhcCCEEEEEEec-cchhhcCCCcccCCcCC
Confidence 77999999999999999998763 44567889999997 78999999998 59999999998 58999999999887 65
Q ss_pred C---CCCeEEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCCCCCcccccceeeec
Q 037516 271 N---NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPI 329 (330)
Q Consensus 271 ~---~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~Cgi~~~~~yp~ 329 (330)
. .++|||+|||||++++++|||||||||++|||+|||||+|+. |.|||+++++||+
T Consensus 159 ~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~---n~cgi~~~~~~~~ 217 (220)
T 8pch_A 159 KTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGK---NMCGLAACASYPI 217 (220)
T ss_dssp CSTTTCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS---CGGGTTTSCEEEE
T ss_pred CCCCcCCcEEEEEEEEccCCeeEEEEECCCCcCcccCCEEEEEcCC---CccccCCCceeEe
Confidence 3 689999999999999999999999999999999999999996 7899999999997
No 34
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=2.7e-65 Score=458.51 Aligned_cols=210 Identities=41% Similarity=0.803 Sum_probs=192.7
Q ss_pred CCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCCC-CCCCCCChHHHHHHHHHcC
Q 037516 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS-RGCYGGWMDDAFSYIIRSQ 195 (330)
Q Consensus 117 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~gC~GG~~~~a~~~~~~~~ 195 (330)
+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+.. .||+||++..|++|+.++.
T Consensus 19 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~~~~gC~GG~~~~a~~y~~~~~ 98 (243)
T 3bwk_A 19 LDRIAYDWRLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSVKNNGCYGGYITNAFDDMIDLG 98 (243)
T ss_dssp CCCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCTTSCGGGCCCHHHHHHHHHHTT
T ss_pred cCCCceecCcCCCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcCCCCCCCCCCHHHHHHHHHHhC
Confidence 799999999999999999999999999999999999999999999999999999999874 8999999999999999856
Q ss_pred CCCCCCCCcccCCCCc-ccCCcCCcccEEeeeeeecC-CcHHHHHHHHhcCCeEEEEeeCCCCcccccCCEEeCCCCCCC
Q 037516 196 GLTDERVYPYQRREGY-CNWQRGAMKAARIRSYQDVP-TSELALRYAVSRQPVSVAIDASSPGFRYYSGGVFAGPCGNNL 273 (330)
Q Consensus 196 Gi~~e~~yPY~~~~~~-c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~~gPv~v~~~~~~~~f~~y~~Gi~~~~~~~~~ 273 (330)
|+++|++|||.+.++. |+.. .....+++++|..++ .++++||++| |||+++|++. ++|+.|++|||...|+..+
T Consensus 99 Gi~~e~~yPY~~~~~~~C~~~-~~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~Y~~Giy~~~c~~~~ 174 (243)
T 3bwk_A 99 GLCSQDDYPYVSNLPETCNLK-RCNERYTIKSYVSIPDDKFKEALRYL--GPISISIAAS-DDFAFYRGGFYDGECGAAP 174 (243)
T ss_dssp SBCBTTTSCCCTTSCCCCCGG-GCSSCBCCCEEEECCTTCHHHHHHHT--CCEEEEECCC-HHHHTCCSSSCCCCCCSSC
T ss_pred CcccccccCCcCCCCCcCCCC-CCccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-hhHHhcCCceecCCCCCcC
Confidence 9999999999998888 9865 234567899999898 6889999999 9999999997 7899999999988887669
Q ss_pred CeEEEEEEeeccC----------CcCeEEEECCCCCCccCCceEEEEecCCC-CCCcccccceeeecC
Q 037516 274 NHAVTIVGYGSSN----------EGPYWLIKNSWGQNWGEGGFIRMRRDVGG-AGLCGIARKASYPIA 330 (330)
Q Consensus 274 ~Hav~iVGyg~~~----------g~~ywivkNSWG~~WG~~Gy~~i~~~~~~-~~~Cgi~~~~~yp~~ 330 (330)
+|||+|||||+++ +++|||||||||++|||+|||||+|+.++ .+.|||+++++||++
T Consensus 175 ~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 242 (243)
T 3bwk_A 175 NHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDENGYKKTCSIGTEAYVPLL 242 (243)
T ss_dssp CEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCSTTTTSSEEEEEC
T ss_pred CeEEEEEEecCccccccccccCCCCCEEEEEeCCCCCcCCCcEEEEEcCCCCCCCcCCccceEEEEec
Confidence 9999999999985 78999999999999999999999999753 345999999999985
No 35
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=1.8e-65 Score=454.18 Aligned_cols=210 Identities=30% Similarity=0.571 Sum_probs=192.8
Q ss_pred CCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCCCCCCCCCChHHHHHHHHHc
Q 037516 115 RRGLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGSRGCYGGWMDDAFSYIIRS 194 (330)
Q Consensus 115 ~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~gC~GG~~~~a~~~~~~~ 194 (330)
.++||++||||++|+|+||||||.||||||||+++++|+++++++++.++||||+|+||+...||+||++..|++|++++
T Consensus 7 ~~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~gC~GG~~~~a~~~~~~~ 86 (222)
T 3f5v_A 7 NGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCASQHGCHGDTIPRGIEYIQHN 86 (222)
T ss_dssp CCCCCSCEEHHHHTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTCSSTTBCCCHHHHHHHHHHH
T ss_pred ccCCCCCCCCccCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcCCCCCCCCCHHHHHHHHHHc
Confidence 34899999999999999999999999999999999999999999999999999999999987899999999999999998
Q ss_pred CCCCCCCCCcccCCCCcccCCcCCcccEEeeeeeecC-CcHHHHHHHHhc--CCeEEEEeeCC-CCcccccCCEEeCC-C
Q 037516 195 QGLTDERVYPYQRREGYCNWQRGAMKAARIRSYQDVP-TSELALRYAVSR--QPVSVAIDASS-PGFRYYSGGVFAGP-C 269 (330)
Q Consensus 195 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~~~~v~-~~~~~i~~~l~~--gPv~v~~~~~~-~~f~~y~~Gi~~~~-~ 269 (330)
|+++|++|||.+..+.|.. .....+++.+|..++ .++++||++|++ |||+++|.+.. ++|++|++||+..+ |
T Consensus 87 -Gi~~e~~yPY~~~~~~C~~--~~~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f~~Y~~gi~~~~~~ 163 (222)
T 3f5v_A 87 -GVVQESYYRYVAREQSCRR--PNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRDN 163 (222)
T ss_dssp -CEEBGGGSCCCSSCCCCCC--CSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCCCC
T ss_pred -CCCchhhCCCcccCCCccC--CcCcceeeccEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccchhhhccCCCceecCCC
Confidence 9999999999999999983 345678899999996 789999999985 99999999952 57999999987654 4
Q ss_pred -CCCCCeEEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCCCCCcccccceeeecC
Q 037516 270 -GNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGGAGLCGIARKASYPIA 330 (330)
Q Consensus 270 -~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~Cgi~~~~~yp~~ 330 (330)
...++|||+|||||+++|++|||||||||++|||+|||||+|+. |.|||+++++||+|
T Consensus 164 ~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~r~~---n~cgi~~~~~~p~~ 222 (222)
T 3f5v_A 164 GYQPNYHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANI---DLMMIEEYPYVVIL 222 (222)
T ss_dssp SSSCEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS---CGGGTTTSCEEEEC
T ss_pred CCCccCcEEEEEEEeccCCCEEEEEEcCCCCCcccCCEEEEEcCC---CeecCCCceeEEeC
Confidence 46789999999999999999999999999999999999999996 78999999999986
No 36
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=1.7e-60 Score=434.73 Aligned_cols=210 Identities=28% Similarity=0.572 Sum_probs=184.5
Q ss_pred CCCCeeecCCC---CCCCccCCCC---CCcchHHHHHHHHHHHHHHHhcC-C--ccccChhhhhcCCCCCCCCCCChHHH
Q 037516 117 GLPRSIDWRAR---GAVTPVKNQG---SCGCCWIFSAVAAVEGITKIRTG-R--LISLSEQQVLDCSGSRGCYGGWMDDA 187 (330)
Q Consensus 117 ~lP~~~Dwr~~---g~v~pV~dQg---~cGsCwAfA~~~~le~~~~~~~~-~--~~~lS~q~l~dc~~~~gC~GG~~~~a 187 (330)
+||++||||++ ++|+|||||| .||||||||++++||++++++++ . .++||+|+|+||+...||+||++..|
T Consensus 35 ~lP~~~DwR~~~~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~~~gC~GG~~~~a 114 (277)
T 1deu_A 35 DLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGNAGSCEGGNDLSV 114 (277)
T ss_dssp GSCSCEETTSBTTBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSSSEETBEECHHHH
T ss_pred cCCCceecccCCCCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcCCCCCCCCCHHHH
Confidence 79999999998 6799999999 99999999999999999999875 3 47999999999987689999999999
Q ss_pred HHHHHHcCCCCCCCCCcccCCCCcccC-Cc-------------CCcccEEeeeeeecCCcHHHHHHHHh-cCCeEEEEee
Q 037516 188 FSYIIRSQGLTDERVYPYQRREGYCNW-QR-------------GAMKAARIRSYQDVPTSELALRYAVS-RQPVSVAIDA 252 (330)
Q Consensus 188 ~~~~~~~~Gi~~e~~yPY~~~~~~c~~-~~-------------~~~~~~~i~~~~~v~~~~~~i~~~l~-~gPv~v~~~~ 252 (330)
++|++++ |+++|++|||.+.+..|.. .. .....+++.+|..++ ++++|+++|+ +|||+++|++
T Consensus 115 ~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~c~~~~~~~~~~i~~y~~v~-~~~~i~~~i~~~GPV~v~i~~ 192 (277)
T 1deu_A 115 WDYAHQH-GIPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLS-GREKMMAEIYANGPISCGIMA 192 (277)
T ss_dssp HHHHHHT-CBCBGGGSCCCSSCCCCCHHHHSEEEEETTEEEECSSCCCBCEEEEEEEC-SHHHHHHHHHHHCCEEEEECC
T ss_pred HHHHHHc-CCCcCccCCCcCCCCCccccccccccccCcccccccCcceEEeceeEecC-CHHHHHHHHHHcCCEEEEEec
Confidence 9999987 9999999999998888873 10 112346777888775 6888999887 6999999999
Q ss_pred CCCCcccccCCEEeCC-CCCCCCeEEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecCCC-----CCCccccccee
Q 037516 253 SSPGFRYYSGGVFAGP-CGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDVGG-----AGLCGIARKAS 326 (330)
Q Consensus 253 ~~~~f~~y~~Gi~~~~-~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~-----~~~Cgi~~~~~ 326 (330)
. ++|+.|++|||..+ |...++|||+|||||+++|++|||||||||++|||+|||||+|+.+. ...|||+++++
T Consensus 193 ~-~~f~~Y~~GIy~~~~~~~~~~HaV~iVGyg~~~g~~YWivkNSWG~~WGe~GY~~i~rg~n~~g~g~~~~cgIe~~~~ 271 (277)
T 1deu_A 193 T-ERLANYTGGIYAEYQDTTYINHVVSVAGWGISDGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGARYNLAIEEHCT 271 (277)
T ss_dssp C-HHHHTCCSSEECBCCSCCCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECTTHHHHTGGGTBTTTTSCEE
T ss_pred c-cccccCcCcEECCCCCCCcCCeEEEEEEecccCCccEEEEEeCCCCccCCCcEEEEEcCCCcccccccccceeccccE
Confidence 8 68999999999987 55678999999999999999999999999999999999999999740 11799999999
Q ss_pred eec
Q 037516 327 YPI 329 (330)
Q Consensus 327 yp~ 329 (330)
|++
T Consensus 272 ~~~ 274 (277)
T 1deu_A 272 FGD 274 (277)
T ss_dssp EEE
T ss_pred eec
Confidence 875
No 37
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=1.7e-60 Score=433.01 Aligned_cols=208 Identities=31% Similarity=0.621 Sum_probs=177.1
Q ss_pred CCCCeeecCCC----CCCCccCCCCCCcchHHHHHHHHHHHHHHHhcC--CccccChhhhhcCCC---CCCCCCCChHHH
Q 037516 117 GLPRSIDWRAR----GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTG--RLISLSEQQVLDCSG---SRGCYGGWMDDA 187 (330)
Q Consensus 117 ~lP~~~Dwr~~----g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~--~~~~lS~q~l~dc~~---~~gC~GG~~~~a 187 (330)
+||++||||++ +.|+||||||.||||||||++++||++++++++ ..++||+|+|+||+. ..||+||++..|
T Consensus 6 ~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~a 85 (266)
T 3cbj_A 6 KLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEA 85 (266)
T ss_dssp CCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHHH
T ss_pred CCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHHH
Confidence 79999998886 789999999999999999999999999999875 478999999999986 389999999999
Q ss_pred HHHHHHcCCCCC-------CCCCccc---------CCCCcccCC---------cCC-------cccEEeeeeeecCCcHH
Q 037516 188 FSYIIRSQGLTD-------ERVYPYQ---------RREGYCNWQ---------RGA-------MKAARIRSYQDVPTSEL 235 (330)
Q Consensus 188 ~~~~~~~~Gi~~-------e~~yPY~---------~~~~~c~~~---------~~~-------~~~~~i~~~~~v~~~~~ 235 (330)
++|++++ |+++ |++|||. +..+.|... +.. ........+..++.+++
T Consensus 86 ~~y~~~~-Gi~~~~~Y~~~e~~~PY~~~~~~~~~~~~~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~~~~~v~~~~~ 164 (266)
T 3cbj_A 86 WNFWTRK-GLVSGGLYESHVGCRPYSIPPCEAHVNGARPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEK 164 (266)
T ss_dssp HHHHHHT-CBCBCCSTTCCCSSSCCCSCCCSCCCSCSSCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBSCCEECCSCHH
T ss_pred HHHHHHh-CcCcCccccccccccCcccccccccccCCCCCCccccCCCccccccCCCCcceeeeeeeeeeeeEEeCCCHH
Confidence 9999987 9999 9999998 344556421 000 00111122334557899
Q ss_pred HHHHHHh-cCCeEEEEeeCCCCcccccCCEEeCCCCC-CCCeEEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecC
Q 037516 236 ALRYAVS-RQPVSVAIDASSPGFRYYSGGVFAGPCGN-NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV 313 (330)
Q Consensus 236 ~i~~~l~-~gPv~v~~~~~~~~f~~y~~Gi~~~~~~~-~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~ 313 (330)
+|+++|+ +|||+++|++. ++|+.|++|||..+|+. .++|||+|||||+++|++|||||||||++|||+|||||+|+.
T Consensus 165 ~i~~~i~~~GPV~v~i~~~-~~f~~Y~~Gvy~~~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~rg~ 243 (266)
T 3cbj_A 165 DIMAEIYKNGPVEGAFSVY-SDFLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQ 243 (266)
T ss_dssp HHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS
T ss_pred HHHHHHHhcCCEEEEEEec-cchhhcCCeEEecCCCCccCCeEEEEEEecccCCceEEEEEcCCCCccCCCCEEEEEcCC
Confidence 9999998 59999999998 68999999999987654 469999999999999999999999999999999999999996
Q ss_pred CCCCCcccccceeeec
Q 037516 314 GGAGLCGIARKASYPI 329 (330)
Q Consensus 314 ~~~~~Cgi~~~~~yp~ 329 (330)
|.|||++.+++++
T Consensus 244 ---n~cgI~~~~~~~~ 256 (266)
T 3cbj_A 244 ---DHCGIESEVVAGI 256 (266)
T ss_dssp ---CGGGTTTSCEECC
T ss_pred ---CcccccCceEEEE
Confidence 6799999998875
No 38
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=2.5e-60 Score=429.22 Aligned_cols=207 Identities=30% Similarity=0.645 Sum_probs=175.4
Q ss_pred CCCCeeecCCC----CCCCccCCCCCCcchHHHHHHHHHHHHHHHhcC--CccccChhhhhcCCCC--CCCCCCChHHHH
Q 037516 117 GLPRSIDWRAR----GAVTPVKNQGSCGCCWIFSAVAAVEGITKIRTG--RLISLSEQQVLDCSGS--RGCYGGWMDDAF 188 (330)
Q Consensus 117 ~lP~~~Dwr~~----g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~--~~~~lS~q~l~dc~~~--~gC~GG~~~~a~ 188 (330)
+||++||||++ +.|+||||||.||||||||++++||++++++++ ..++||||+|+||+.. .||+||++..|+
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~ 81 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCESCGLGCEGGILGPAW 81 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTTSBCTTBCBCHHHHH
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcCCCCCCCCCCHHHHH
Confidence 68999999998 689999999999999999999999999999986 6899999999999765 899999999999
Q ss_pred HHHHHcCCCCCCCCC-------ccc---------CCCCcccCC----------cCC---ccc----EEeeeeeecCCcHH
Q 037516 189 SYIIRSQGLTDERVY-------PYQ---------RREGYCNWQ----------RGA---MKA----ARIRSYQDVPTSEL 235 (330)
Q Consensus 189 ~~~~~~~Gi~~e~~y-------PY~---------~~~~~c~~~----------~~~---~~~----~~i~~~~~v~~~~~ 235 (330)
+|++++ |+++|++| ||. +..+.|... +.. ... ........++.+++
T Consensus 82 ~yi~~~-Gi~~e~~y~~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (254)
T 3qsd_A 82 DYWVKE-GIVTGSSKENHAGCEPYPFPKCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVKNDEK 160 (254)
T ss_dssp HHHHHT-CBCBCCCTTTCCSSSCCSSCCCBCSSCSSSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEEECCSCHH
T ss_pred HHHHHc-CCCcccccccCcCcCCcccccccccccCcCCCCcccccCCccccccccCCccceeeeeeeeeeeeEecCCcHH
Confidence 999998 99999888 996 344455321 000 000 01111224556899
Q ss_pred HHHHHHh-cCCeEEEEeeCCCCcccccCCEEeCCCCC-CCCeEEEEEEeeccCCcCeEEEECCCCCCccCCceEEEEecC
Q 037516 236 ALRYAVS-RQPVSVAIDASSPGFRYYSGGVFAGPCGN-NLNHAVTIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV 313 (330)
Q Consensus 236 ~i~~~l~-~gPv~v~~~~~~~~f~~y~~Gi~~~~~~~-~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~ 313 (330)
+|+++|+ +|||+++|++. ++|++|++|||..++.. .++|||+|||||++++++|||||||||++|||+|||||+|+.
T Consensus 161 ~i~~~l~~~gPv~~~~~~~-~~f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~rg~ 239 (254)
T 3qsd_A 161 AIQKEIMKYGPVEAGFTVY-EDFLNYKSGIYKHITGETLGGHAIRIIGWGVENKAPYWLIANSWNEDWGENGYFRIVRGR 239 (254)
T ss_dssp HHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS
T ss_pred HHHHHHHHcCCEEEEEEec-cccccccCCeeccCCCCCCCCeEEEEEEEeecCCeeEEEEEeCCCCCcccCCeEEEEcCC
Confidence 9999997 69999999998 78999999999988554 569999999999999999999999999999999999999996
Q ss_pred CCCCCcccccceeee
Q 037516 314 GGAGLCGIARKASYP 328 (330)
Q Consensus 314 ~~~~~Cgi~~~~~yp 328 (330)
|.|||++.+...
T Consensus 240 ---n~CgI~~~~~~~ 251 (254)
T 3qsd_A 240 ---DECSIESEVTAG 251 (254)
T ss_dssp ---CGGGTTSSEEEE
T ss_pred ---CeecCCCceEee
Confidence 789999998764
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=1.1e-54 Score=394.92 Aligned_cols=206 Identities=23% Similarity=0.444 Sum_probs=163.6
Q ss_pred CeeecCCC-CCCC--ccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCCC---CCCCCCC-hHHHHHHHH
Q 037516 120 RSIDWRAR-GAVT--PVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSGS---RGCYGGW-MDDAFSYII 192 (330)
Q Consensus 120 ~~~Dwr~~-g~v~--pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~---~gC~GG~-~~~a~~~~~ 192 (330)
.-.|||+. |+++ ||||||.||||||||++++||++++++++.++.||||+|+||+.. .||+||. +..++.|++
T Consensus 9 ~~~dWR~~~~~~~it~VkdQg~CGSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~~i~ 88 (265)
T 2wbf_X 9 YCNRLKDENNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFLQIIE 88 (265)
T ss_dssp CBCGGGCTTSTGGGSCCCBCTTSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHHHHH
T ss_pred HHHhhccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHHHHH
Confidence 46899999 6877 999999999999999999999999999999999999999999863 7999996 455567887
Q ss_pred HcCCCCCCCCCcccCC--CCcccCCcC----------------CcccEEeeeeeecCC-----c----HHHHHHHHh-cC
Q 037516 193 RSQGLTDERVYPYQRR--EGYCNWQRG----------------AMKAARIRSYQDVPT-----S----ELALRYAVS-RQ 244 (330)
Q Consensus 193 ~~~Gi~~e~~yPY~~~--~~~c~~~~~----------------~~~~~~i~~~~~v~~-----~----~~~i~~~l~-~g 244 (330)
+++|+++|++|||... .+.|+.... ....+++.+|..++. + +++|+++|+ +|
T Consensus 89 ~~Ggi~~e~~yPY~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~~i~~~G 168 (265)
T 2wbf_X 89 DYGFLPAESNYPYNYVKVGEQCPKVEDHWMNLWDNGKILHNKNEPNSLDGKGYTAYESERFHDNMDAFVKIIKTEVMNKG 168 (265)
T ss_dssp HHCCCCBTTTSCCCGGGTTSCCCCCCTTCCCTTTTCEECCCCCSSSTTCCSSEEEEEGGGGTTCHHHHHHHHHHHHHHHS
T ss_pred HcCCCCCccccCCcCCCCCCCCCCccccccccccccccccccCCCceeecCCceEeeccccccchhhHHHHHHHHHHhcC
Confidence 7845999999999863 467875321 112346777776652 3 378899988 59
Q ss_pred CeEEEEeeCCCCccccc-CCEE-eCCCCC-CCCeEEEEEEeecc---CC--cCeEEEECCCCCCccCCceEEEEecCCCC
Q 037516 245 PVSVAIDASSPGFRYYS-GGVF-AGPCGN-NLNHAVTIVGYGSS---NE--GPYWLIKNSWGQNWGEGGFIRMRRDVGGA 316 (330)
Q Consensus 245 Pv~v~~~~~~~~f~~y~-~Gi~-~~~~~~-~~~Hav~iVGyg~~---~g--~~ywivkNSWG~~WG~~Gy~~i~~~~~~~ 316 (330)
||+++|++. +|+.|+ +|++ ...|+. .++|||+|||||++ +| ++|||||||||++|||+|||||+|+..
T Consensus 169 PV~v~i~~~--~f~~y~~~g~~~~~~c~~~~~~HaV~iVGyG~~~~~~g~~~~YWivkNSWG~~WGe~GY~ri~~~g~-- 244 (265)
T 2wbf_X 169 SVIAYIKAE--NVMGYEFSGKKVKNLCGDDTADHAVNIVGYGNYVNSEGEKKSYWIVRNSWGPYWGDEGYFKVDMYGP-- 244 (265)
T ss_dssp CEEEEECGG--GGCSGGGGSSSEECCCCCSCCCEEEEEEEEEEEECTTSCEEEEEEEECSBCTTSTBTTEEEEESSCC--
T ss_pred CEEEEEEcc--cccccccCCcEEcCCCCCCcCCEEEEEEEEeCCcccCCCcCCEEEEEcCCCCccCCCCEEEEEecCC--
Confidence 999999986 577664 4432 334764 68999999999985 55 589999999999999999999998542
Q ss_pred CCcccc---cceeeec
Q 037516 317 GLCGIA---RKASYPI 329 (330)
Q Consensus 317 ~~Cgi~---~~~~yp~ 329 (330)
|.|||+ +.+.||+
T Consensus 245 n~Cgi~~~~~~~~~~~ 260 (265)
T 2wbf_X 245 THCHFNFIHSVVIFNV 260 (265)
T ss_dssp TTCSSCSCCEEEEECE
T ss_pred CccCcceeEEEEeccc
Confidence 789954 4555554
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=3e-53 Score=389.91 Aligned_cols=230 Identities=18% Similarity=0.232 Sum_probs=176.9
Q ss_pred eEEEcccCCCCCHHHHHHhhcccCCCCCCcccccccccccccCCC-CCCCCCCCeeecCCCCCCCccCCCCCCcchHHHH
Q 037516 68 YKLSLNEFADLTDEEFIASHTGYKMPTRNISNQSQSYANNWFGYP-DSRRGLPRSIDWRARGAVTPVKNQGSCGCCWIFS 146 (330)
Q Consensus 68 ~~~g~N~fsDlt~eE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA 146 (330)
..-..|++.++..|.++.. ++..++..+.... .+... ....+||++||||+++ ||||||.||||||||
T Consensus 14 ~~~~~~~~~~~~~~~~~~~-lG~~p~~~d~rd~-------~~~~~~~~~~~lP~s~DwR~~~---pVkdQG~CGSCWAFA 82 (291)
T 3ois_A 14 LVPRGSHMQTVLKRRKKSG-YGYIPDIADIRDF-------SYTPEKSVIAALPPKVDLTPPF---QVYDQGRIGSCTANA 82 (291)
T ss_dssp ---------CCCCCCCCTT-CCEECCCCCTTCC-------BCCCCHHHHHTCCSEEECCCSS---CCCBCTTSSCHHHHH
T ss_pred cccchhhHhHhhhcccccc-CCCCCCCCccccc-------ccCCCccccccCCcceecccCC---CcccCCCCccHHHHH
Confidence 4456889999999988764 4655544221111 11111 0113799999999984 999999999999999
Q ss_pred HHHHHHHHHHHhcCCccccChhhhh--cCCC----C-CCCCCCChHHHHHHHHHcCCCCCCCCCcccCCC---CcccCCc
Q 037516 147 AVAAVEGITKIRTGRLISLSEQQVL--DCSG----S-RGCYGGWMDDAFSYIIRSQGLTDERVYPYQRRE---GYCNWQR 216 (330)
Q Consensus 147 ~~~~le~~~~~~~~~~~~lS~q~l~--dc~~----~-~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---~~c~~~~ 216 (330)
+++++|++++ +++..+.||+|+|+ +|.. . .+|.||++..|++|++++ ||++|++|||.+.+ +.|...+
T Consensus 83 a~~alE~~~~-~~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~~-Gi~~e~~yPY~~~~~~~~~C~~~~ 160 (291)
T 3ois_A 83 LAAAIQFERI-HDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKL-GVCPEKEWPYGDTPADPRTEEFPP 160 (291)
T ss_dssp HHHHHHHHHH-HTTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHHT-CCCBGGGSCCCCCCCCTTTCSCCT
T ss_pred HHHHHHHHHH-HhCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHHh-CCCCHhhCCCCCCccccccccccc
Confidence 9999999876 56778899999998 6753 1 468899999999999988 99999999999874 3554310
Q ss_pred -------------CCcccEEeeeeeecCCcHHHHHHHHhc-CCeEEEEeeCCCCcccccC--CEEeCC-CCC--CCCeEE
Q 037516 217 -------------GAMKAARIRSYQDVPTSELALRYAVSR-QPVSVAIDASSPGFRYYSG--GVFAGP-CGN--NLNHAV 277 (330)
Q Consensus 217 -------------~~~~~~~i~~~~~v~~~~~~i~~~l~~-gPv~v~~~~~~~~f~~y~~--Gi~~~~-~~~--~~~Hav 277 (330)
.....+++++|..|+.++++|+++|++ |||+++|+++ ++|+.|++ |||..+ |.. .++|||
T Consensus 161 ~~~~~~~p~~~C~~~~~~~~i~~y~~v~~~e~~i~~al~~~gPV~v~~~~~-~~f~~y~~~~Gi~~~~~~~~~~~~~Hav 239 (291)
T 3ois_A 161 GAPASKKPSDQCYKDAQNYKITEYSRVAQDIDHLKACLAVGSPFVFGFSVY-NSWVGNNSLPVRIPLPTKNDTLEGGHAV 239 (291)
T ss_dssp TCGGGSCCCHHHHHHHGGGCCCEEEECCSCHHHHHHHHHTTCCEEEEEEEE-HHHHGGGCCCSBCCCCCTTSCEEEEEEE
T ss_pred cccccCCCCHHHHhhcccceeccEEEcCcCHHHHHHHHHcCCCEEEEEEec-cchhhcCCCCeEEeCCCCCCCCcCCeEE
Confidence 012456889999998789999999995 8999999998 68999998 999887 443 359999
Q ss_pred EEEEeeccCCcCeEEEECCCCCCccCCceEEEEecC
Q 037516 278 TIVGYGSSNEGPYWLIKNSWGQNWGEGGFIRMRRDV 313 (330)
Q Consensus 278 ~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~ 313 (330)
+|||||+ +++|||||||||++||++|||||+|+.
T Consensus 240 ~iVGy~~--~~~ywivkNSWG~~WG~~Gy~~i~~~~ 273 (291)
T 3ois_A 240 LCVGYDD--EIRHFRIRNSWGNNVGEDGYFWMPYEY 273 (291)
T ss_dssp EEEEEET--TTTEEEEECSBCTTSTBTTEEEEEHHH
T ss_pred EEEEEeC--CCCEEEEEeCCCCCCCCCcEEEEEHHH
Confidence 9999984 778999999999999999999999984
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=100.00 E-value=1.6e-41 Score=323.97 Aligned_cols=193 Identities=17% Similarity=0.295 Sum_probs=151.0
Q ss_pred CCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHh-cCCccccCh----------------hhhhcCCC----
Q 037516 117 GLPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIR-TGRLISLSE----------------QQVLDCSG---- 175 (330)
Q Consensus 117 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~-~~~~~~lS~----------------q~l~dc~~---- 175 (330)
..|..|+++....++||+|||+||+|||||+++++|+.++++ +++.+.||+ |+|+||+.
T Consensus 47 ~~~~~F~~~~~~~~tpVknQg~cGsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~~~~~~ 126 (453)
T 2cb5_A 47 RAQHVFQHAVPQEGKPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEP 126 (453)
T ss_dssp HCCCCCSEECSCCCSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCceeeeeccCCCCcccCCCccchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHHhccCC
Confidence 356778888877899999999999999999999999999998 578999999 99999962
Q ss_pred -----------CCCCCCCChHHHHHHHHHcCCCCCCCCCcccCCC---------------------------C------c
Q 037516 176 -----------SRGCYGGWMDDAFSYIIRSQGLTDERVYPYQRRE---------------------------G------Y 211 (330)
Q Consensus 176 -----------~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---------------------------~------~ 211 (330)
..+|+||....++.++.++ |++++++|||.... + .
T Consensus 127 ~d~R~v~~l~~~~gcdGG~~~~a~~~i~ky-Gl~p~~~yP~~~~s~ns~~mn~~L~~kLr~~a~~LR~~~~~g~~~~~l~ 205 (453)
T 2cb5_A 127 EDGRLVQFLLMNPANDGGQWDMLVNIVEKY-GVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEIS 205 (453)
T ss_dssp TTSHHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCCCTGGGBCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred cchhhHHHhcCCCCCCCCChHHHHHHHHHc-CccchhhccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence 2799999999999999877 99999999997631 1 1
Q ss_pred ----------------c----------cC-------------Cc----CCcccE--Eeeeeee-----------------
Q 037516 212 ----------------C----------NW-------------QR----GAMKAA--RIRSYQD----------------- 229 (330)
Q Consensus 212 ----------------c----------~~-------------~~----~~~~~~--~i~~~~~----------------- 229 (330)
| .. .+ ...... .+.+|..
T Consensus 206 ~~k~~~l~~iy~il~~clG~pP~~F~~~~~dkd~~~~~~~~~TP~~F~~~~~~~~~~~~~yv~l~n~p~~~~py~~~y~v 285 (453)
T 2cb5_A 206 ATQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYEKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKHNKLYTV 285 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCSSEEEEEECTTSCEEEEEEECHHHHHHHHTTTTSCGGGEEEEECCCCTTSCSSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCceeeEEEEccCCcccccCCCCHHHHHHHhcCCcCCCCCeEEEecCCCCcCcccceeEE
Confidence 4 11 00 000011 3334432
Q ss_pred ----------------cC-Cc-HHHHHHHHhc-CCeEEEEeeCCCCcccccCCEEeCC-C--------------------
Q 037516 230 ----------------VP-TS-ELALRYAVSR-QPVSVAIDASSPGFRYYSGGVFAGP-C-------------------- 269 (330)
Q Consensus 230 ----------------v~-~~-~~~i~~~l~~-gPv~v~~~~~~~~f~~y~~Gi~~~~-~-------------------- 269 (330)
++ .. .+.++.+|+. |||++++++.. +.++++|||+.+ |
T Consensus 286 ~~~~Nv~~g~~~~y~Nvp~~~l~~~~~~al~~g~PV~~~~Dv~~--~~~~k~GI~~~~~~~~~~~fg~~~~~m~KaeRl~ 363 (453)
T 2cb5_A 286 EYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGK--HFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLT 363 (453)
T ss_dssp TTCCSSTTCCCCCEEECCHHHHHHHHHHHHHTTCCEEEEECTTT--TEETTTTEECTTSBCHHHHHSCCSCSSCHHHHHH
T ss_pred eecCcccccccccccccCHHHHHHHHHHHHHcCCCEEEEEEeCh--hhccCCcEEcCccccchhhcCccccccCHHHHhh
Confidence 22 11 1344567775 89999999983 555699999876 4
Q ss_pred --CCCCCeEEEEEEee--cc-CCc-CeEEEECCCCCCccCCceEEEEec
Q 037516 270 --GNNLNHAVTIVGYG--SS-NEG-PYWLIKNSWGQNWGEGGFIRMRRD 312 (330)
Q Consensus 270 --~~~~~Hav~iVGyg--~~-~g~-~ywivkNSWG~~WG~~Gy~~i~~~ 312 (330)
.+..+|||+||||| .+ +|+ +|||||||||++||++|||+|+++
T Consensus 364 ~~~s~~~HAmlivGyg~~~d~~G~~~yWiVkNSWG~~wG~~GY~~ms~~ 412 (453)
T 2cb5_A 364 FGESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCMTDE 412 (453)
T ss_dssp TTSCCCCEEEEEEEEEECTTSCSCEEEEEEECSBCTTSTBTTEEEEEHH
T ss_pred ccCCCCCeEEEEEEeccccccCCCccEEEEEcCcCCCcCcCceEEechh
Confidence 23579999999999 76 787 899999999999999999999985
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=100.00 E-value=8.7e-41 Score=319.26 Aligned_cols=192 Identities=20% Similarity=0.258 Sum_probs=137.5
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHh-cCCccccCh----------------hhhhcCCC-----
Q 037516 118 LPRSIDWRARGAVTPVKNQGSCGCCWIFSAVAAVEGITKIR-TGRLISLSE----------------QQVLDCSG----- 175 (330)
Q Consensus 118 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~-~~~~~~lS~----------------q~l~dc~~----- 175 (330)
.|..|+|+..+.+|||+|||+||+|||||+++++|+.++++ +++.+.||+ |+|+||+.
T Consensus 53 ~~~~F~~~~~~~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~~~~~~ 132 (457)
T 2e01_A 53 DNRVFNTVVSTDSTPVTNQKSSGRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSADQDIDS 132 (457)
T ss_dssp CCCCCSEECC------------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTTSCTTS
T ss_pred CCCceEEEecCCccCcccCCCCccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcCCcccc
Confidence 46678888878899999999999999999999999999998 788999999 78899975
Q ss_pred --------CCCCCCCChHHHHHHHHHcCCCCCCCCCcc-cCC---------------------------------C----
Q 037516 176 --------SRGCYGGWMDDAFSYIIRSQGLTDERVYPY-QRR---------------------------------E---- 209 (330)
Q Consensus 176 --------~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY-~~~---------------------------------~---- 209 (330)
..+|+||....++.++.++ |++++++||| ... .
T Consensus 133 r~v~~l~~~~gcdGG~~~~a~~~i~ky-Givpe~~yP~~s~~s~ns~~~n~~L~~kLr~~a~~lR~~~~~~~~~~~~l~~ 211 (457)
T 2e01_A 133 RLVQYLLAAPTEDGGQYSMFLNLVKKY-GLIPKDLYGDLPYSTTASRKWNSLLTTKLREFAETLRTALKERSADDSIIVT 211 (457)
T ss_dssp HHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCSCSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSCTTSHHHHH
T ss_pred hhhhhhccCCCCCCCCHHHHHHHHHHc-CccchhhcCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhHHH
Confidence 3799999999999999887 9999999999 310 0
Q ss_pred -----------------CcccC----Cc-----CC-------------------------------------cccEEe--
Q 037516 210 -----------------GYCNW----QR-----GA-------------------------------------MKAARI-- 224 (330)
Q Consensus 210 -----------------~~c~~----~~-----~~-------------------------------------~~~~~i-- 224 (330)
+.|+. .. .. .+.+.+
T Consensus 212 ~~~~~l~~iy~il~~~LG~pP~~~~~~F~~~~~dkd~~~~~~~~TP~~F~~~~v~~~~~dyV~l~n~p~~py~~~y~ve~ 291 (457)
T 2e01_A 212 LREQMQREIFRLMSLFMDIPPVQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDPRHPYGKLIKIDR 291 (457)
T ss_dssp HHHHHHHHHHHHHHHHSCCCSSCTTSCEEEEEECTTSCEEEEEECHHHHHHHTTCCCTTSEEEEECCTTSCTTCEEEETT
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCceEEEEEEcCCCCccCCCcChHHHHHHHcCCCchheEEEeecCCCccCeeEEEec
Confidence 01111 00 00 000000
Q ss_pred ---------eeeeecCCc--HHHHHHHHhc-CCeEEEEeeCCCCcccccCCEEeCCC---------------------CC
Q 037516 225 ---------RSYQDVPTS--ELALRYAVSR-QPVSVAIDASSPGFRYYSGGVFAGPC---------------------GN 271 (330)
Q Consensus 225 ---------~~~~~v~~~--~~~i~~~l~~-gPv~v~~~~~~~~f~~y~~Gi~~~~~---------------------~~ 271 (330)
..|..++.+ .+.++.+|.. |||++++++. .|.+|++|||+..| .+
T Consensus 292 ~~N~~~g~~~~y~Nvp~d~l~~~~~~aL~~g~PV~~~~Dv~--~~~~~~~GI~~~~~~~~~~fg~~~~m~KaeRl~~~~s 369 (457)
T 2e01_A 292 LGNVLGGDAVIYLNVDNETLSKLVVKRLQNNKAVFFGSHTP--KFMDKKTGVMDIELWNYPAIGYNLPQQKASRIRYHES 369 (457)
T ss_dssp CCSSTTCCCEEEEECCHHHHHHHHHHHHHTTCCEEEEECTT--TTEETTTTEECTTSBCGGGGTCCCCCCHHHHHHTTSC
T ss_pred cCCeecCCceeEEEcCHHHHHHHHHHHHHhCCCEEEEEEcC--HhHcccCceecccccchhhcCcccccCHHHhhccCCC
Confidence 013333311 1445566774 8999999998 37789999997664 24
Q ss_pred CCCeEEEEEEeecc-CCc--CeEEEECCCCCCccCCceEEEEec
Q 037516 272 NLNHAVTIVGYGSS-NEG--PYWLIKNSWGQNWGEGGFIRMRRD 312 (330)
Q Consensus 272 ~~~Hav~iVGyg~~-~g~--~ywivkNSWG~~WG~~Gy~~i~~~ 312 (330)
..+|||+|||||.+ +|+ +|||||||||++||++|||+|+++
T Consensus 370 ~~~HAmlivGyg~d~~G~~p~yW~VkNSWG~~wG~~GY~~ms~~ 413 (457)
T 2e01_A 370 LMTAAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVMTQK 413 (457)
T ss_dssp CCCEEEEEEEEEECTTTCCEEEEEEECSSCTTSTBTTEEEEEHH
T ss_pred CCCeEEEEEEEEeccCCCccCEEEEEeCccCCcCCCceEEeehh
Confidence 57999999999986 788 899999999999999999999985
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=100.00 E-value=2.2e-35 Score=276.29 Aligned_cols=180 Identities=23% Similarity=0.272 Sum_probs=132.9
Q ss_pred CCccCCCCCCcchHHHHHHHHHHHHHHHhcCCccccChhhhhcCCC-------------CCCCCCCChHHHHHHHHHcCC
Q 037516 130 VTPVKNQGSCGCCWIFSAVAAVEGITKIRTGRLISLSEQQVLDCSG-------------SRGCYGGWMDDAFSYIIRSQG 196 (330)
Q Consensus 130 v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~-------------~~gC~GG~~~~a~~~~~~~~G 196 (330)
++||||||+||||||||+++++|+.+++++++.+.||+|+|++|+. ..+|+||....|+.|++++ |
T Consensus 22 vtpVknQg~cGsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k~-G 100 (383)
T 3pw3_A 22 ITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETF-G 100 (383)
T ss_dssp CCCCCBCCBSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHHT-C
T ss_pred CCCcccCCCCcHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHHc-C
Confidence 8999999999999999999999999999999999999999999973 2699999999999999988 9
Q ss_pred CCCCCCCc------ccCCCC-------------c-cc----C------Cc---------------CCc-------c----
Q 037516 197 LTDERVYP------YQRREG-------------Y-CN----W------QR---------------GAM-------K---- 220 (330)
Q Consensus 197 i~~e~~yP------Y~~~~~-------------~-c~----~------~~---------------~~~-------~---- 220 (330)
|+++++|| +...+. . .. . .. ..+ .
T Consensus 101 ivpe~~YP~~~~~~~~s~n~~~m~~~L~~~Lr~~a~~~~r~l~~~~~~~~~~~~~i~~il~~~LG~pP~~F~~~gk~~TP 180 (383)
T 3pw3_A 101 LVPEEEMRPGMMYADTLSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGKEYTP 180 (383)
T ss_dssp CCBGGGSCTTGGGTCSSCBCHHHHHHHHHHHHHHHSSCCSSCCBCTTCCBHHHHHHHHHHHHHHCCCCSSEEETTEEECH
T ss_pred cCcHHhCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHhhhhhhchhhHHHHHHHHHHHHHHHhCCCCceEEecCCCcCH
Confidence 99999999 221110 0 00 0 00 000 0
Q ss_pred -------cEEeeeeee--------------c------------CCcHHHHHH----HHhcC-CeEEEEeeCCCCcccccC
Q 037516 221 -------AARIRSYQD--------------V------------PTSELALRY----AVSRQ-PVSVAIDASSPGFRYYSG 262 (330)
Q Consensus 221 -------~~~i~~~~~--------------v------------~~~~~~i~~----~l~~g-Pv~v~~~~~~~~f~~y~~ 262 (330)
......|.. + .-..+.|++ +|..| ||..+-+|....|. +.
T Consensus 181 ~~F~~~v~~~~~dyV~l~n~p~~py~~~y~ve~~~N~~~g~~~Nvp~d~l~~~~~~~Lk~G~~V~fg~DV~~~~f~--~~ 258 (383)
T 3pw3_A 181 KSFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMSYNLPLDEFMEVFDNAINTGYTIAWGSDVSESGFT--RD 258 (383)
T ss_dssp HHHHHHHTCCGGGEEEEECCSSSCTTCEEECCCTTCTTCCEEEECCHHHHHHHHHHHHHTTCCEEEEEECCSTTBC--TT
T ss_pred HHHHHHhCCCccceEEEeeCCCCccCceEEEecCCCccCCccCCcCHHHHHHHHHHHHHcCCcEEEEcccCccccC--CC
Confidence 000111111 0 011344444 44455 99999999954565 88
Q ss_pred CEEeCC--C---------------------------------------------CCCCCeEEEEEEeecc-CCcCeEEEE
Q 037516 263 GVFAGP--C---------------------------------------------GNNLNHAVTIVGYGSS-NEGPYWLIK 294 (330)
Q Consensus 263 Gi~~~~--~---------------------------------------------~~~~~Hav~iVGyg~~-~g~~ywivk 294 (330)
||...+ - .+..+|||+|||||.+ +|++|||||
T Consensus 259 Gi~~~~~~~~~~~~~g~~~~~~~~~~kaer~~~~~~~~e~~~tk~~R~~~~d~~~t~~~Ha~~ivG~~~d~~g~~yw~vk 338 (383)
T 3pw3_A 259 GVAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKDQEGNEYYMVK 338 (383)
T ss_dssp SEECCBCHHHHHHHSSCCHHHHHTSCHHHHCTTTSCCCBCCCCHHHHHHHHHTTSSCCEEEEEEEEEEECTTCCEEEEEE
T ss_pred ceeeCcchhhHHHhcCcchhhhccCCHHHhhhccCCCcccCCCHHHHHHHhhhccCcCCeEEEEEEEEEcCCCceEEEEE
Confidence 887321 0 1234799999999974 788999999
Q ss_pred CCCCCCccCCceEEEEec
Q 037516 295 NSWGQNWGEGGFIRMRRD 312 (330)
Q Consensus 295 NSWG~~WG~~Gy~~i~~~ 312 (330)
||||++||++||++|+++
T Consensus 339 NSWg~~~g~~Gy~~m~~~ 356 (383)
T 3pw3_A 339 NSWGTNSKYNGIWYASKA 356 (383)
T ss_dssp CSBCSCSTTTTEEEEEHH
T ss_pred eCCCCCCCcCCeEEecHH
Confidence 999999999999999875
No 44
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=99.81 E-value=8e-20 Score=140.96 Aligned_cols=75 Identities=31% Similarity=0.567 Sum_probs=69.2
Q ss_pred CchhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEcccCCCCCHHHHHHhhcccCCC
Q 037516 18 HEDSISAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNREGNQTYKLSLNEFADLTDEEFIASHTGYKMP 93 (330)
Q Consensus 18 ~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~~~~s~~~g~N~fsDlt~eE~~~~~~~~~~~ 93 (330)
++..+..+|++|+++|+|.|.+.+|+..|+.||++|+++|++||++ +.+|++|+|+|+|||.+||++++++.+..
T Consensus 17 ~~~~~~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~-~~sy~lglN~FaDLT~eEF~~~~lg~~~~ 91 (106)
T 3f75_P 17 KEAHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQ-GYSYSLKMNHFGDLSRDEFRRKYLGFKKS 91 (106)
T ss_dssp CHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHTS-CCSEEECCCTTTTCCHHHHHHHSCCBCC-
T ss_pred CcHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCeeeCCcccccCCHHHHHHHHcCCCCC
Confidence 4678899999999999999999889999999999999999999997 88999999999999999999998886653
No 45
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=99.76 E-value=5.7e-19 Score=130.17 Aligned_cols=68 Identities=31% Similarity=0.534 Sum_probs=61.3
Q ss_pred HHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHhhc---CCCceEEEcccCCCCCHHHHHHhhcccCC
Q 037516 23 SAKHELWMAQSARTYKNQAEKAMRFKIFKKNFRFIEKFNRE---GNQTYKLSLNEFADLTDEEFIASHTGYKM 92 (330)
Q Consensus 23 ~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~fsDlt~eE~~~~~~~~~~ 92 (330)
...|++|+.+|+|.|.+.+|+..| .||++|++.|++||++ +..+|++|+|+|+|||.+|| +.++|.+.
T Consensus 7 ~~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlT~eEf-~~~~g~~~ 77 (80)
T 2l95_A 7 DEEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEF-AQRSGKKV 77 (80)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCCGGGTSSHHHH-HHHHTSCC
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCcccccCCHHHH-HHHhCCCC
Confidence 468999999999999888899999 9999999999999985 45789999999999999999 87777554
No 46
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=97.09 E-value=0.017 Score=47.41 Aligned_cols=129 Identities=18% Similarity=0.194 Sum_probs=88.4
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHH--------hcCCccccChhhhhcCCCCCCCCCCChHHHHHHHHHcCCCCCCCCCcc
Q 037516 134 KNQGSCGCCWIFSAVAAVEGITKI--------RTGRLISLSEQQVLDCSGSRGCYGGWMDDAFSYIIRSQGLTDERVYPY 205 (330)
Q Consensus 134 ~dQg~cGsCwAfA~~~~le~~~~~--------~~~~~~~lS~q~l~dc~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY 205 (330)
..||.-+-|-+|+.++.|-+.... .+.-.+.+|+++|.++ |..+...++|++.. |....
T Consensus 25 ETQg~~~WCa~Y~~aAilN~~~nt~~~nA~~iMr~~yPN~s~~~l~~t-------~~~~~q~Iky~~s~-G~~~~----- 91 (183)
T 1pxv_A 25 EQQFDNSWAAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC-------ATFPNQMIEYGKSQ-GRDIH----- 91 (183)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCSCCCHHHHHHHHSTTSCTTTGGGC-------CBCHHHHHHHHHHT-TCCCE-----
T ss_pred eccCcCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc-------CCCHHHHHHHHHHc-CcChh-----
Confidence 469999999999999998765421 1112357999999884 56788999999855 42110
Q ss_pred cCCCCcccCCcCCcccEEeeeeeecCCcHHHHHHHHh-cCCeEEEEeeCCCCcccccCCEEeCCCCCCCCeEEEEEEeec
Q 037516 206 QRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVS-RQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGS 284 (330)
Q Consensus 206 ~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~i~~~l~-~gPv~v~~~~~~~~f~~y~~Gi~~~~~~~~~~Hav~iVGyg~ 284 (330)
+..+ . .+-+.+++.+. +-||.+...-..+ .......+||++||||-.
T Consensus 92 ----------------~~nr----~-ls~neV~~~i~~Nk~I~v~~~~v~e-----------~~~~~~~gHA~av~Gya~ 139 (183)
T 1pxv_A 92 ----------------YQEG----V-PSYNQVDQLTKDNVGIMILAQSVSQ-----------NPNDPHLGHALAVVGNAK 139 (183)
T ss_dssp ----------------EEES----C-CCHHHHHHHHHTTCCEEEEEECCCS-----------STTSCCCEEEEEEEEEEE
T ss_pred ----------------HhcC----C-CCHHHHHHHHhcCCcEEEEcccccc-----------CCCCccCceeEEEEeeee
Confidence 0000 1 35667788887 4688876653312 113346799999999999
Q ss_pred cCCcCeEEEECCCCCCccCCceEEEEec
Q 037516 285 SNEGPYWLIKNSWGQNWGEGGFIRMRRD 312 (330)
Q Consensus 285 ~~g~~ywivkNSWG~~WG~~Gy~~i~~~ 312 (330)
-++.++.+|=|=|-. |++-++.+
T Consensus 140 ~~~~~~y~~WNPW~~-----~~~~~~a~ 162 (183)
T 1pxv_A 140 INDQEKLIYWNPWDT-----ELSIQDAD 162 (183)
T ss_dssp ETTEEEEEEECTTCS-----SCEEEETT
T ss_pred cCCCeEEEEeCCccC-----CcEeecCC
Confidence 888899999887743 77777654
No 47
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=97.07 E-value=0.016 Score=52.66 Aligned_cols=129 Identities=19% Similarity=0.227 Sum_probs=86.4
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHH--------hcCCccccChhhhhcCCCCCCCCCCChHHHHHHHHHcCCCCCCCCCcc
Q 037516 134 KNQGSCGCCWIFSAVAAVEGITKI--------RTGRLISLSEQQVLDCSGSRGCYGGWMDDAFSYIIRSQGLTDERVYPY 205 (330)
Q Consensus 134 ~dQg~cGsCwAfA~~~~le~~~~~--------~~~~~~~lS~q~l~dc~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY 205 (330)
..||.-+-|-+||.+++|-+.... .+.-...+|+++|.++ |..+...++|++.. |...
T Consensus 201 ETQg~~pWCa~Ya~aailN~~~~t~~~nA~~iMr~~yPN~S~~~l~~t-------s~~~~q~Iky~qsy-G~~~------ 266 (367)
T 1x9y_A 201 EQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC-------ATFPNQMIEYGKSQ-GRDI------ 266 (367)
T ss_dssp CCCSSSSCHHHHHHHHHHHHHTTCSCCCHHHHHHHHCTTSCTTTGGGC-------CCCHHHHHHHHHHT-TEEE------
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc-------CCCHHHHHHHHHHh-Ccch------
Confidence 469999999999999998765321 1112357888888884 56788899998854 4211
Q ss_pred cCCCCcccCCcCCcccEEeeeeeecCCcHHHHHHHHh-cCCeEEEEeeCCCCcccccCCEEeCCCCCCCCeEEEEEEeec
Q 037516 206 QRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVS-RQPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGS 284 (330)
Q Consensus 206 ~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~i~~~l~-~gPv~v~~~~~~~~f~~y~~Gi~~~~~~~~~~Hav~iVGyg~ 284 (330)
.-.-.. .+-+.+++.+. +-||.+.+....+. ..+...+|||+||||..
T Consensus 267 -------------------~~~n~~-ls~deVk~~id~Nk~I~v~~~~v~~~-----------~n~~~~gHAlavvGyA~ 315 (367)
T 1x9y_A 267 -------------------HYQEGV-PSYNQVDQLTKDNVGIMILAQSVSQN-----------PNDPHLGHALAVVGNAK 315 (367)
T ss_dssp -------------------EEEESC-CCHHHHHHHHHTTCCEEEEEEETTSC-----------SSSCCCSEEEEEEEEEE
T ss_pred -------------------hhhcCC-CCHHHHHHHHhcCCcEEEEccccccC-----------CCCccCceeEEEEeccc
Confidence 100111 35566777777 57999887765222 12346799999999987
Q ss_pred cCCcCeEEEECCCCCCccCCceEEEEec
Q 037516 285 SNEGPYWLIKNSWGQNWGEGGFIRMRRD 312 (330)
Q Consensus 285 ~~g~~ywivkNSWG~~WG~~Gy~~i~~~ 312 (330)
.++.+|.++=|=|- . +++-++..
T Consensus 316 ~~~~~~y~~WNPW~---~--~~~~~sa~ 338 (367)
T 1x9y_A 316 INDQEKLIYWNPWD---T--ELSIQDAD 338 (367)
T ss_dssp ETTEEEEEEECTTC---S--SCEEEETT
T ss_pred cCCCcEEEEecCcc---C--CceeecCC
Confidence 77888999977774 3 36655543
No 48
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=96.66 E-value=0.066 Score=43.82 Aligned_cols=119 Identities=18% Similarity=0.171 Sum_probs=80.4
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHH--------hcCCccccChhhhhcCCCCCCCCCCChHHHHHHHHHcCCCCCCCCCcc
Q 037516 134 KNQGSCGCCWIFSAVAAVEGITKI--------RTGRLISLSEQQVLDCSGSRGCYGGWMDDAFSYIIRSQGLTDERVYPY 205 (330)
Q Consensus 134 ~dQg~cGsCwAfA~~~~le~~~~~--------~~~~~~~lS~q~l~dc~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY 205 (330)
..||.-+-|-+||.+++|-+.... .+.-...+|+++|..+ |..+...++|++.. |- +-
T Consensus 16 ETQg~~pWCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~-------~~t~~e~iky~~s~-g~-~~----- 81 (174)
T 1cv8_A 16 ETQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFT-------GLTPREMIYFGQTQ-GR-SP----- 81 (174)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHC-------CCCHHHHHHHHHHT-TC-CC-----
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhc-------CCCHHHHHHHHHHc-CC-Ch-----
Confidence 469999999999999998865421 1112357999999964 56788899998766 32 10
Q ss_pred cCCCCcccCCcCCcccEEeeeeeecCCcHHHHHHHHhc-CCeEEEEeeCCCCcccccCCEEeCCCCCCCCeEEEEEEeec
Q 037516 206 QRREGYCNWQRGAMKAARIRSYQDVPTSELALRYAVSR-QPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGS 284 (330)
Q Consensus 206 ~~~~~~c~~~~~~~~~~~i~~~~~v~~~~~~i~~~l~~-gPv~v~~~~~~~~f~~y~~Gi~~~~~~~~~~Hav~iVGyg~ 284 (330)
. . .. .. .+-+.+++.+.+ -|+.+..+-. +.. .....+|||+||||-.
T Consensus 82 ---------~------~-~n---~~-ls~~eV~~~~~~nk~i~i~~~~v-e~~-----------~~~~~gHAlav~Gy~~ 129 (174)
T 1cv8_A 82 ---------Q------L-LN---RM-TTYNEVDNLTKNNKGIAILGSRV-ESR-----------NGMHAGHAMAVVGNAK 129 (174)
T ss_dssp ---------E------E-ES---SC-CCHHHHHHHHHTTCCEEEEEEES-SCB-----------TTBCCEEEEEEEEEEE
T ss_pred ---------h------h-hc---CC-CCHHHHHHHHhcCCceEEEcccc-cCC-----------CCCCCceeEEEEeeee
Confidence 0 0 00 01 356677788874 6887766543 111 1245699999999998
Q ss_pred c-CCcCeEEEECCCC
Q 037516 285 S-NEGPYWLIKNSWG 298 (330)
Q Consensus 285 ~-~g~~ywivkNSWG 298 (330)
. +|.+|.++=|=|-
T Consensus 130 ~~ng~~~y~~WNPW~ 144 (174)
T 1cv8_A 130 LNNGQEVIIIWNPWD 144 (174)
T ss_dssp ETTSCEEEEEECTTC
T ss_pred ecCCceEEEEeCCcc
Confidence 5 6788999988774
No 49
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=86.92 E-value=2.3 Score=36.75 Aligned_cols=59 Identities=22% Similarity=0.319 Sum_probs=35.9
Q ss_pred CcHHHHHHHHhcC-CeEEEEeeCCC-----Ccccc--cCCEEeCCCCCCCCeEEEEEEeeccCCcCeEEEECCC
Q 037516 232 TSELALRYAVSRQ-PVSVAIDASSP-----GFRYY--SGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSW 297 (330)
Q Consensus 232 ~~~~~i~~~l~~g-Pv~v~~~~~~~-----~f~~y--~~Gi~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSW 297 (330)
.+.++|+..|.+| ||.|.....-. .|..+ .+|-... ...+|+|+|+||+. +..+|-+.+
T Consensus 130 ~sl~~L~~~I~~G~PVIv~~t~~~~p~~~~~~~~W~~~~G~~~~---~~~~H~VVl~GYd~----~~vyi~DP~ 196 (236)
T 3erv_A 130 KSIEELYKSVKAGQPVVIITNATFAPLDEDEFTTWETNNGDVSI---TYNEHCVVLIGYDQ----ESVYIRDPL 196 (236)
T ss_dssp SCHHHHHHHHHTTCCEEEEEETTSSCCCGGGCEEEEETTEEEEE---CTTEEEEEEEEECS----SEEEEECTT
T ss_pred CCHHHHHHHHHCCCeEEEEEeCCcccccccccceeecCCCceee---ccCCeEEEEEEEeC----CEEEEECCC
Confidence 5889999999986 99987654210 12111 1222111 23589999999986 245555554
No 50
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=26.76 E-value=1.2e+02 Score=26.35 Aligned_cols=52 Identities=29% Similarity=0.575 Sum_probs=35.7
Q ss_pred HHHHHHHhc-CCeEEEEeeCCCCcccccCCEEeCCCCCCCCeEEEEEEeeccCCcCeEEEECCCCCCcc--CCceEEEEe
Q 037516 235 LALRYAVSR-QPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG--EGGFIRMRR 311 (330)
Q Consensus 235 ~~i~~~l~~-gPv~v~~~~~~~~f~~y~~Gi~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG--~~Gy~~i~~ 311 (330)
+.|+..|.+ .||.+.-.. ..++||.+|=||.. .+|+-|= || || .+|||.+..
T Consensus 172 ~~I~~eL~~grPV~~~G~~------------------~~gGHAwViDGY~~---~~~~H~N--wG--WgG~~nGYy~l~~ 226 (261)
T 4d8b_A 172 AQIDKELSQNQPVYYQGVG------------------KVGGHAFVIDGADG---RNFYHVN--WG--WGGVSDGFFRLDA 226 (261)
T ss_dssp HHHHHHHHTTCCEEEEEEE------------------TTEEEEEEEEEEES---SSCEEEE--CS--STTTTCEEECTTC
T ss_pred HHHHHHHHcCCCEEEEeec------------------CCCceEEEEccccc---CCEEEEE--cC--CCCCCCceeeccc
Confidence 567777775 699875431 14699999999985 3566663 44 44 489998853
No 51
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=26.07 E-value=28 Score=24.08 Aligned_cols=26 Identities=15% Similarity=0.139 Sum_probs=19.7
Q ss_pred CCccCCCCCCcchHHHHHHHHHHHHHHH
Q 037516 130 VTPVKNQGSCGCCWIFSAVAAVEGITKI 157 (330)
Q Consensus 130 v~pV~dQg~cGsCwAfA~~~~le~~~~~ 157 (330)
+--|+=||.|++| ......+|..+..
T Consensus 37 ~V~v~l~GaC~gc--~Tlk~gIe~~L~~ 62 (74)
T 1th5_A 37 IVKVRLTGPAAVV--RTVRIAVSKKLRE 62 (74)
T ss_dssp EEEECCCSSSSSS--SSHHHHHHHHHHH
T ss_pred EEEEEEecCCcch--HHHHHHHHHHHHH
Confidence 5578899999999 3455688877764
No 52
>1ziv_A Calpain 9; cysteine protease, papain, calcium-dependent, thiol protease, structural genomics consortium, SGC, hydrolase; 2.31A {Homo sapiens} SCOP: d.3.1.3 PDB: 2p0r_A*
Probab=25.60 E-value=50 Score=29.84 Aligned_cols=39 Identities=28% Similarity=0.560 Sum_probs=0.0
Q ss_pred CeEEEEEEeecc----CCcCeEEEECCCCC-----Ccc----------------------CCceEEEEec
Q 037516 274 NHAVTIVGYGSS----NEGPYWLIKNSWGQ-----NWG----------------------EGGFIRMRRD 312 (330)
Q Consensus 274 ~Hav~iVGyg~~----~g~~ywivkNSWG~-----~WG----------------------~~Gy~~i~~~ 312 (330)
+||-.|++...- ++.....|||-||. .|. ++|-|||+.+
T Consensus 245 ~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~~dG~FWMs~~ 314 (339)
T 1ziv_A 245 GHAYSVTGIDQVSFRGQRIELIRIRNPWGQVEWNGSWSDSSPEWRSVGPAEQKRLCHTALDDGEFWMAFK 314 (339)
T ss_dssp TCCEEEEEEEEEEETTEEEEEEEEECCSSCCCCCSTTSTTCHHHHHSCHHHHHHTTCCCCSSSEEEEEHH
T ss_pred CeeEEEeEEEEEecCCCceEEEEecCCCCCCccCCCCCcCChhccccCHHHHHHhhCCCCCCCEEEEEHH
No 53
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=24.97 E-value=53 Score=29.66 Aligned_cols=39 Identities=23% Similarity=0.443 Sum_probs=0.0
Q ss_pred CeEEEEEEeec----cCCcCeEEEECCCC-CCcc-------------------------CCceEEEEec
Q 037516 274 NHAVTIVGYGS----SNEGPYWLIKNSWG-QNWG-------------------------EGGFIRMRRD 312 (330)
Q Consensus 274 ~Hav~iVGyg~----~~g~~ywivkNSWG-~~WG-------------------------~~Gy~~i~~~ 312 (330)
+||-.|++... ..+.....|||-|| ..|- ++|-|||+.+
T Consensus 246 ~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~dG~FWMs~~ 314 (339)
T 2r9f_A 246 GHAYSVTDAKQVTYQGQRVNLIRMRNPWGEVEWKGPWSDNSYEWNKVDPYEREQLRVKMEDGEFWMSFR 314 (339)
T ss_dssp TCCEEEEEEEEEEETTEEEEEEEEECTTSCCCCCSTTSTTCGGGGGSCHHHHHHHCCCCCSSEEEEEHH
T ss_pred CceEEEeEEEEEecCCCceEEEEEeCCCCCccccCCCCcCCccccccCHHHHHHhCCCCCCCEEEEEHH
No 54
>1dki_A Pyrogenic exotoxin B zymogen; cysteine protease, papain-like; 1.60A {Streptococcus pyogenes} SCOP: d.3.1.1 PDB: 1pvj_A*
Probab=24.80 E-value=1.6e+02 Score=26.83 Aligned_cols=52 Identities=29% Similarity=0.571 Sum_probs=34.7
Q ss_pred HHHHHHHhc-CCeEEEEeeCCCCcccccCCEEeCCCCCCCCeEEEEEEeeccCCcCeEEEECCCCCCcc--CCceEEEEe
Q 037516 235 LALRYAVSR-QPVSVAIDASSPGFRYYSGGVFAGPCGNNLNHAVTIVGYGSSNEGPYWLIKNSWGQNWG--EGGFIRMRR 311 (330)
Q Consensus 235 ~~i~~~l~~-gPv~v~~~~~~~~f~~y~~Gi~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG--~~Gy~~i~~ 311 (330)
+.|+..|.+ .||.+.-.-. .++||.+|=||.. .+||=|= || || .+|||.+.-
T Consensus 290 ~~i~~eL~~~rPV~~~G~~~------------------~gGHAfV~DGy~~---~~~~H~N--wG--WgG~~nGyy~l~~ 344 (371)
T 1dki_A 290 AQIDKELSQNQPVYYQGVGK------------------VGGHAFVIDGADG---RNFYHVN--WG--WGGVSDGFFRLDA 344 (371)
T ss_dssp HHHHHHHHTTCCEEEEEEET------------------TEEEEEEEEEECS---SSEEEEE--CS--STTTTCEEEESCC
T ss_pred HHHHHHHHcCCCEEEEeecC------------------CCceEEEECcccC---CCeEEEE--eC--cCCCCCcceeccC
Confidence 456677775 6987643211 1699999999974 3566663 44 44 489999853
Done!