BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037522
(541 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 194/445 (43%), Gaps = 51/445 (11%)
Query: 82 TVTCDPKNVEHILKARFDNYPKGPTWQAAFHDLLGDGIFNS------DGDTWLFQRKTAA 135
+ P++V+ L + Y K A + G+ +F + + W QR+
Sbjct: 37 VIVTSPESVKKFLMS--TKYNKDSKMYRALQTVFGERLFGQGLVSECNYERWHKQRRVID 94
Query: 136 LEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLLRMTFDNICGLAFGKD 195
L F+ +L M + +A + ILE PV QD+L D + AFG +
Sbjct: 95 LAFSRSSLVSLMETFNEKA--EQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGME 152
Query: 196 PQTLSQGLPENSFAVAF----DRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHI 251
L S AV A+ TL +FL + RK LR + S++ +
Sbjct: 153 TSMLLGAQKPLSQAVKLMLEGITASRNTLAKFLPGK-----RKQLR-----EVRESIRFL 202
Query: 252 DEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKKE-SYSDEFLQHVALNFIL 310
+ D + R+ L ++GE D+L++ +K +E + DE L + F +
Sbjct: 203 RQVGRDWVQRRREAL-----KRGEEVPA----DILTQILKAEEGAQDDEGLLDNFVTFFI 253
Query: 311 AGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLI 370
AG +TS+ +++ +S+ P + ++ E+ V+ R D FE++ RL
Sbjct: 254 AGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLD----------FEDLGRLQ 303
Query: 371 YLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCL 430
YL L E+LRLYP + ++ ++ L G VP + + +S Y +GRM + ED L
Sbjct: 304 YLSQVLKESLRLYPPA-WGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMD-TYFEDPL 361
Query: 431 EFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVVP 490
F P+R+ ++ + F+ G R C+G+ A +++K + A++L R +VP
Sbjct: 362 TFNPDRF-----GPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVP 416
Query: 491 GHRVEQKMSLTLFMKYGLMMNVHPR 515
G R + TL ++ + PR
Sbjct: 417 GQRFGLQEQATLKPLDPVLCTLRPR 441
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 185/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 42 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 90
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 91 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 146
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 147 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 205
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 206 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 245
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++AG +T+S +S+ + + +NP V K A E VL
Sbjct: 246 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 301
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+VP S + D VL + G
Sbjct: 302 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVLGGEYPLEKGD 354
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 355 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 409
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 410 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 442
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 184/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 202
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 203 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 242
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++AG +T+S +S+ + + +NP V K A E VL
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 298
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 299 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 351
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+GK A
Sbjct: 352 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGKQFA 406
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 407 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 184/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFFGDGLF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 202
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 203 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 242
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++AG +T+S +S+ + + +NP V K A E VL
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 298
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 299 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 351
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 352 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 406
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 407 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 184/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 45 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 93
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 94 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 149
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 150 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNK-LQRTNPDDPAYDENK 208
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 209 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLHGKD 248
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++AG +T+S +S+ + + +NP V K A E VL
Sbjct: 249 PETGEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVL---- 304
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 305 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 357
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 358 EIMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 412
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 413 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 445
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 184/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 42 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 90
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 91 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 146
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 147 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 205
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 206 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 245
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++AG +T+S +S+ + + +NP V K A E VL
Sbjct: 246 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 301
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 302 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 354
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 355 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 409
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 410 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 442
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 184/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 202
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 203 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 242
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++AG +T+S +S+ + + +NP V K A E VL
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 298
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 299 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 351
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 352 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 406
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 407 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 184/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 202
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 203 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 242
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++AG +T+S +S+ + + +NP V K A E VL
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 298
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 299 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 351
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 352 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 406
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 407 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 184/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 40 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 88
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 89 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 144
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 145 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 203
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 204 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 243
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++AG +T+S +S+ + + +NP V K A E VL
Sbjct: 244 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 299
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 300 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 352
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 353 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 407
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 408 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 440
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 184/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 202
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 203 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 242
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++AG +T+S +S+ + + +NP V K A E VL
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 298
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 299 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 351
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 352 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 406
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 407 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 184/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 202
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 203 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 242
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++AG +T+S +S+ + + +NP V K A E VL
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 298
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 299 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 351
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 352 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 406
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 407 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 184/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 40 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 88
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 89 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 144
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 145 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 203
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 204 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 243
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++AG +T+S +S+ + + +NP V K A E VL
Sbjct: 244 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 299
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 300 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVLGGEYPLEKGD 352
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 353 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 407
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 408 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 440
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 185/455 (40%), Gaps = 74/455 (16%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFARDFAGDGLF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKP-VDFQD 177
S W F+ + ++ A V A++ + + +L A ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEYIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLPENSFAVAFDRATEAT---LQRFLLPQAIWKL 232
+ R+T D I CG + + Q P F ++ RA + LQR +
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHP---FIISMIRALDEVMNKLQRANPDDPAYDE 200
Query: 233 RKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKK 292
K +K +++ + II+ RK A+ DDLL++ +
Sbjct: 201 NKR-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTQMLNG 240
Query: 293 K-----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLE 347
K E D + + + F++AG +T+S +S+ + + +NP V K+A E VL
Sbjct: 241 KDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVL-- 298
Query: 348 TRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPA 407
V+ +++V +L Y+ L+E LRL+P+ P S + D VL +
Sbjct: 299 ---------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 408 GSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKD 467
G V I + R K IWG+D EF+PER+ + Q+ F F G R C+G+
Sbjct: 350 GDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQ 404
Query: 468 LAYLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
A + + +L + + ++ K +LTL
Sbjct: 405 FALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 184/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 42 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 90
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 91 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 146
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 147 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 205
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 206 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 245
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++AG +T+S +S+ + + +NP V K A E VL
Sbjct: 246 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 301
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 302 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVLGGEYPLEKGD 354
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 355 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 409
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 410 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 442
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 184/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 202
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 203 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 242
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++AG +T+S +S+ + + +NP V K A E VL
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 298
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 299 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 351
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F + G R C+G+ A
Sbjct: 352 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPYGNGQRACIGQQFA 406
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 407 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 183/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 202
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 203 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 242
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++AG + +S +S+ + + +NP V K A E VL
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 298
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 299 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 351
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 352 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 406
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 407 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 34/261 (13%)
Query: 247 SLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK-----ESYSDEFL 301
+K +++ + II+ RK A+ DDLL+ + K E DE +
Sbjct: 209 DIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKDPETGEPLDDENI 255
Query: 302 QHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPL 361
++ + F++AG +T+S +S+ + + +NP V K A E VL V+
Sbjct: 256 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----------VDPVP 304
Query: 362 VFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRM 421
+++V +L Y+ L+E LRL+P+ P S + D VL + G + I + R
Sbjct: 305 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRD 364
Query: 422 KFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVL 481
K IWG+D EF+PER+ + Q+ F F G R C+G+ A + + +L
Sbjct: 365 KTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFALHEATLVLGMML 419
Query: 482 LRYHLTVVPGHRVEQKMSLTL 502
+ + ++ K +LTL
Sbjct: 420 KHFDFEDHTNYELDIKETLTL 440
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 183/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGEF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 202
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 203 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 242
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++AG +T+S +S+ + + +NP V K A E VL
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 298
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 299 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 351
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 352 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 406
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 407 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 183/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 202
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 203 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 242
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++AG +T+S +S+ + + +NP V K A E VL
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 298
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 299 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 351
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C G+ A
Sbjct: 352 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACEGQQFA 406
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 407 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 34/261 (13%)
Query: 247 SLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK-----ESYSDEFL 301
+K +++ + II+ RK A+ DDLL+ + K E DE +
Sbjct: 208 DIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKDPETGEPLDDENI 254
Query: 302 QHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPL 361
++ + F++AG +T+S +S+ + + +NP V K A E VL V+
Sbjct: 255 RYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----------VDPVP 303
Query: 362 VFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRM 421
+++V +L Y+ L+E LRL+P+ P S + D VL + G + I + R
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRD 363
Query: 422 KFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVL 481
K IWG+D EF+PER+ + Q+ F F G R C+G+ A + + +L
Sbjct: 364 KTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 482 LRYHLTVVPGHRVEQKMSLTL 502
+ + ++ K +LTL
Sbjct: 419 KHFDFEDHTNYELDIKETLTL 439
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 183/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 202
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 203 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 242
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++ G +T+S +S+ + + +NP V K A E VL
Sbjct: 243 PETGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 298
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 299 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 351
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 352 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 406
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 407 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 183/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 202
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 203 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 242
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++AG + +S +S+ + + +NP V K A E VL
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 298
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 299 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 351
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 352 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 406
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 407 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 183/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 40 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 88
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 89 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 144
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 145 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 203
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 204 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 243
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++AG +T+S +S+ + + +NP V K A E VL
Sbjct: 244 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 299
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 300 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 352
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C G+ A
Sbjct: 353 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACPGQQFA 407
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 408 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 440
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 183/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 202
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 203 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 242
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++ G +T+S +S+ + + +NP V K A E VL
Sbjct: 243 PETGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 298
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 299 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 351
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 352 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 406
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 407 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 183/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 202
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 203 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 242
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++ G +T+S +S+ + + +NP V K A E VL
Sbjct: 243 PETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 298
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 299 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 351
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 352 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 406
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 407 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 183/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 202
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 203 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 242
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++ G +T+S +S+ + + +NP V K A E VL
Sbjct: 243 PETGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 298
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 299 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 351
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 352 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 406
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 407 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 183/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 202
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 203 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 242
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++AG + +S +S+ + + +NP V K A E VL
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 298
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 299 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 351
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 352 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 406
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 407 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 183/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 202
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 203 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 242
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++ G +T+S +S+ + + +NP V K A E VL
Sbjct: 243 PETGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 298
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 299 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 351
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 352 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 406
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 407 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 183/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 202
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 203 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 242
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++ G +T+S +S+ + + +NP V K A E VL
Sbjct: 243 PETGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 298
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 299 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 351
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 352 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 406
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 407 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 184/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 202
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 203 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 242
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++AG +T+S +S+ + + +NP V K A E VL
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 298
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 299 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 351
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F + G R C+G+ A
Sbjct: 352 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPWGNGQRACIGQQFA 406
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 407 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 183/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 202
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 203 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 242
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++AG +T+S +S+ + + +NP V K A E VL
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 298
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 299 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 351
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F G R C+G+ A
Sbjct: 352 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPHGNGQRACIGQQFA 406
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 407 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 149/344 (43%), Gaps = 44/344 (12%)
Query: 170 AKPVDFQDLLLRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAI 229
KPV +D+ + D I +FG + +L+ P++ F L RF
Sbjct: 145 GKPVTLKDVFGAYSMDVITSTSFGVNIDSLNN--PQDPFV-----ENTKKLLRFDFLDPF 197
Query: 230 WKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKL-----ELASRDREQGEAATTTPHDD 284
+ L +++ P L I E L+ + R++ + R +E T D
Sbjct: 198 F---------LSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVD 248
Query: 285 LL-----SRFMKKKESY---SDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDK 336
L S+ K+ ES+ SD L ++ FI AG +T+S +S+ + ++ +P V+ K
Sbjct: 249 FLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQK 308
Query: 337 IATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSD 396
+ EI VL + P ++ V ++ YL ++ETLRL+P + + V
Sbjct: 309 LQEEIDAVLPN----------KAPPTYDTVLQMEYLDMVVNETLRLFP-IAMRLERVCKK 357
Query: 397 DVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAF 456
DV G F+P G V YA+ R W E +F PER+ ++ + D Y + F
Sbjct: 358 DVEINGMFIPKGVVVMIPSYALHRDPKYWTEP-EKFLPERFSKKNKDNI---DPYIYTPF 413
Query: 457 NAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVVPGHRVEQKMSL 500
+GPR C+G A + MK VL + ++ K+SL
Sbjct: 414 GSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSL 457
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 149/344 (43%), Gaps = 44/344 (12%)
Query: 170 AKPVDFQDLLLRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAI 229
KPV +D+ + D I +FG + +L+ P++ F L RF
Sbjct: 147 GKPVTLKDVFGAYSMDVITSTSFGVNIDSLNN--PQDPFV-----ENTKKLLRFDFLDPF 199
Query: 230 WKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKL-----ELASRDREQGEAATTTPHDD 284
+ L +++ P L I E L+ + R++ + R +E T D
Sbjct: 200 F---------LSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVD 250
Query: 285 LL-----SRFMKKKESY---SDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDK 336
L S+ K+ ES+ SD L ++ FI AG +T+S +S+ + ++ +P V+ K
Sbjct: 251 FLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQK 310
Query: 337 IATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSD 396
+ EI VL + P ++ V ++ YL ++ETLRL+P + + V
Sbjct: 311 LQEEIDAVLPN----------KAPPTYDTVLQMEYLDMVVNETLRLFP-IAMRLERVCKK 359
Query: 397 DVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAF 456
DV G F+P G V YA+ R W E +F PER+ ++ + D Y + F
Sbjct: 360 DVEINGMFIPKGVVVMIPSYALHRDPKYWTEP-EKFLPERFSKKNKDNI---DPYIYTPF 415
Query: 457 NAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVVPGHRVEQKMSL 500
+GPR C+G A + MK VL + ++ K+SL
Sbjct: 416 GSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSL 459
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 149/344 (43%), Gaps = 44/344 (12%)
Query: 170 AKPVDFQDLLLRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAI 229
KPV +D+ + D I +FG + +L+ P++ F L RF
Sbjct: 146 GKPVTLKDVFGAYSMDVITSTSFGVNIDSLNN--PQDPFV-----ENTKKLLRFDFLDPF 198
Query: 230 WKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKL-----ELASRDREQGEAATTTPHDD 284
+ L +++ P L I E L+ + R++ + R +E T D
Sbjct: 199 F---------LSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVD 249
Query: 285 LL-----SRFMKKKESY---SDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDK 336
L S+ K+ ES+ SD L ++ FI AG +T+S +S+ + ++ +P V+ K
Sbjct: 250 FLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQK 309
Query: 337 IATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSD 396
+ EI VL + P ++ V ++ YL ++ETLRL+P + + V
Sbjct: 310 LQEEIDAVLPN----------KAPPTYDTVLQMEYLDMVVNETLRLFP-IAMRLERVCKK 358
Query: 397 DVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAF 456
DV G F+P G V YA+ R W E +F PER+ ++ + D Y + F
Sbjct: 359 DVEINGMFIPKGVVVMIPSYALHRDPKYWTEP-EKFLPERFSKKNKDNI---DPYIYTPF 414
Query: 457 NAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVVPGHRVEQKMSL 500
+GPR C+G A + MK VL + ++ K+SL
Sbjct: 415 GSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSL 458
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 183/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 202
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 203 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 242
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F++AG +T+S +S+ + + +NP V K A E VL
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 298
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 299 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 351
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F G R C+G+ A
Sbjct: 352 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPAGNGQRACIGQQFA 406
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 407 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 106/457 (23%), Positives = 184/457 (40%), Gaps = 78/457 (17%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFD-NYPKGPTWQAAFHDLLGDGIF 120
IF GR Q L+ CD ++RFD N + P + D GDG+F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFDKNLSQAPKF---VRDFAGDGLF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLL-----PQAIW 230
+ R+T D I CG + + Q P F + RA + + + P
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHP---FITSMVRALDEAMNKLRRANPDDPAYDE 200
Query: 231 KLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFM 290
R++ +K +++ + II+ RK A+ DDLL+ +
Sbjct: 201 NKRQFQE---------DIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHML 238
Query: 291 KKK-----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVL 345
K E DE +++ + F+ AG + +S +S+ + + +NP K A E VL
Sbjct: 239 NGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVL 298
Query: 346 LETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFV 405
V+ +++V +L Y+ L+E LRL+P+ P S + D VL +
Sbjct: 299 -----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPL 347
Query: 406 PAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLG 465
G + I + R K IWG+D EF+PER+ + Q+ F F G R C+G
Sbjct: 348 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIG 402
Query: 466 KDLAYLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ A + + +L + + ++ K +LTL
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 34/261 (13%)
Query: 247 SLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK-----ESYSDEFL 301
+K +++ + II+ RK A+ DDLL+ + K E DE +
Sbjct: 208 DIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKDPETGEPLDDENI 254
Query: 302 QHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPL 361
++ + F++AG + +S +S+ + + +NP V K A E VL V+
Sbjct: 255 RYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-----------VDPVP 303
Query: 362 VFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRM 421
+++V +L Y+ L+E LRL+P+ P S + D VL + G + I + R
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRD 363
Query: 422 KFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVL 481
K IWG+D EF+PER+ + Q+ F F G R C+G+ A + + +L
Sbjct: 364 KTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 482 LRYHLTVVPGHRVEQKMSLTL 502
+ + ++ K +LTL
Sbjct: 419 KHFDFEDHTNYELDIKETLTL 439
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 183/453 (40%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 202
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 203 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 242
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + ++AG +T+S +S+ + + +NP V K A E VL
Sbjct: 243 PETGEPLDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 298
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 299 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGD 351
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 352 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 406
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +LTL
Sbjct: 407 LHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 439
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/457 (23%), Positives = 184/457 (40%), Gaps = 78/457 (17%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFD-NYPKGPTWQAAFHDLLGDGIF 120
IF GR Q L+ CD ++RFD N + P + DL GDG+F
Sbjct: 40 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFDKNLSQAPKF---VRDLAGDGLF 88
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 89 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 144
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLL-----PQAIW 230
+ R+T D I CG + + Q P F + RA + + + P
Sbjct: 145 DMTRLTLDTIGLCGFNYRFNSFYRDQPHP---FITSMVRALDEAMNKLRRANPDDPAYDE 201
Query: 231 KLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFM 290
R++ +K +++ + II+ RK A+ DDLL+ +
Sbjct: 202 NKRQFQE---------DIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHML 239
Query: 291 KKK-----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVL 345
K E DE +++ + F+ AG + +S +S+ + + +NP K A E VL
Sbjct: 240 NGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVL 299
Query: 346 LETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFV 405
V+ ++V +L Y+ L+E LRL+P+ P S + D VL +
Sbjct: 300 -----------VDPVPSHKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPL 348
Query: 406 PAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLG 465
G + I + R K +WG+D EF+PER+ + Q+ F F G R C+G
Sbjct: 349 EKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIG 403
Query: 466 KDLAYLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ A + + +L + + ++ K +LTL
Sbjct: 404 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTL 440
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 118/261 (45%), Gaps = 34/261 (13%)
Query: 247 SLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK-----ESYSDEFL 301
+K +++ + II+ RK A+ DDLL+ + K E DE +
Sbjct: 208 DIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKDPETGEPLDDENI 254
Query: 302 QHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPL 361
++ + F++AG +++S +S+ + + +NP V K A E VL V+
Sbjct: 255 RYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----------VDPVP 303
Query: 362 VFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRM 421
+++V +L Y+ L+E LRL+P+ P S + D VL + G + I + R
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRD 363
Query: 422 KFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVL 481
K IWG+D EF+PER+ + Q+ F F G R C+G+ A + + +L
Sbjct: 364 KTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 482 LRYHLTVVPGHRVEQKMSLTL 502
+ + ++ K +L L
Sbjct: 419 KHFDFEDHTNYELDIKETLLL 439
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 118/261 (45%), Gaps = 34/261 (13%)
Query: 247 SLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK-----ESYSDEFL 301
+K +++ + II+ RK A+ DDLL+ + K E DE +
Sbjct: 209 DIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKDPETGEPLDDENI 255
Query: 302 QHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPL 361
++ + F++AG +++S +S+ + + +NP V K A E VL V+
Sbjct: 256 RYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----------VDPVP 304
Query: 362 VFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRM 421
+++V +L Y+ L+E LRL+P+ P S + D VL + G + I + R
Sbjct: 305 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRD 364
Query: 422 KFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVL 481
K IWG+D EF+PER+ + Q+ F F G R C+G+ A + + +L
Sbjct: 365 KTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFALHEATLVLGMML 419
Query: 482 LRYHLTVVPGHRVEQKMSLTL 502
+ + ++ K +L L
Sbjct: 420 KHFDFEDHTNYELDIKETLLL 440
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 34/228 (14%)
Query: 247 SLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK-----ESYSDEFL 301
+K +++ + II+ RK A+ DDLL+ + K E DE +
Sbjct: 208 DIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKDPETGEPLDDENI 254
Query: 302 QHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPL 361
++ + F++AG +++S +S+ + + +NP V K A E VL V+
Sbjct: 255 RYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----------VDPVP 303
Query: 362 VFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRM 421
+++V +L Y+ L+E LRL+P+ P S + D VL + G + I + R
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRD 363
Query: 422 KFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 364 KTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 406
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 181/453 (39%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 40 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 88
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 89 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 144
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 145 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 203
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 204 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 243
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F+ AG + +S +S+ + + +NP V K A E VL
Sbjct: 244 PETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 299
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 300 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGD 352
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 353 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 407
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +L L
Sbjct: 408 LHEATLVLGMMLKHFDFEDHTNYELDIKETLVL 440
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 181/453 (39%), Gaps = 70/453 (15%)
Query: 68 IFAIPVLGR------KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIF 120
IF GR Q L+ CD ++RFD K + F D GDG+F
Sbjct: 39 IFKFEAPGRVTRYLSSQRLIKEACD--------ESRFD---KNLSQALKFVRDFAGDGLF 87
Query: 121 NS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEA-KPVDFQD 177
S W F+ + ++ A V A++ + + +L A + ++ +
Sbjct: 88 TSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQL----VQKWERLNADEHIEVPE 143
Query: 178 LLLRMTFDNI--CGLAFGKDPQTLSQGLP-ENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ R+T D I CG + + Q P S A D A LQR + K
Sbjct: 144 DMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN-KLQRANPDDPAYDENK 202
Query: 235 YLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK- 293
+K +++ + II+ RK A+ DDLL+ + K
Sbjct: 203 R-------QFQEDIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLNGKD 242
Query: 294 ----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR 349
E DE +++ + F+ AG + +S +S+ + + +NP V K A E VL
Sbjct: 243 PETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL---- 298
Query: 350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS 409
V+ +++V +L Y+ L+E LRL+P+ P S + D VL + G
Sbjct: 299 -------VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGD 351
Query: 410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLA 469
+ I + R K IWG+D EF+PER+ + Q+ F F G R C+G+ A
Sbjct: 352 ELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFA 406
Query: 470 YLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + +L + + ++ K +L L
Sbjct: 407 LHEATLVLGMMLKHFDFEDHTNYELDIKETLVL 439
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 20/224 (8%)
Query: 283 DDLLSRFMKKKESYSDEFLQHVALNFILA----GRDTSSVAMSWFFWLVSQNPRVEDKIA 338
DDLL+ ++ K+ D + + ++A G +T + + W ++ +P D+I
Sbjct: 242 DDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIR 301
Query: 339 TEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDV 398
E+ V T GR P+ FE+V +L + + E +RL P+V ++ V++
Sbjct: 302 DEVEAV---TGGR--------PVAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESE 350
Query: 399 LPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNA 458
L G +PAG+ + YS YAI R + +D LEF P+RWL + +Y F+A
Sbjct: 351 L-GGYRIPAGADIIYSPYAIQRDPKSY-DDNLEFDPDRWLPERAANVP---KYAMKPFSA 405
Query: 459 GPRICLGKDLAYLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
G R C + Q+ I A + +Y V G ++ +TL
Sbjct: 406 GKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSNDAVRVGITL 449
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 183/413 (44%), Gaps = 61/413 (14%)
Query: 119 IFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVS---RAIKHRFCPILEVAQLEAKPVDF 175
IFN++ + W KT F + R V+ ++K + EV E+ VD
Sbjct: 133 IFNNNPELW----KTTRPFFMKALSGPGLVRMVTVCAESLKTHLDRLEEVTN-ESGYVDV 187
Query: 176 QDLLLRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKL--- 232
LL R+ D L F + P L E++ V +A + P +K+
Sbjct: 188 LTLLRRVMLDTSNTL-FLRIP------LDESAIVVKIQGYFDAWQALLIKPDIFFKISWL 240
Query: 233 -RKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMK 291
+KY + S+K + + + +I+ ++ +++ E+ E + +L+ +
Sbjct: 241 YKKYEK---------SVKDLKDAIEVLIAEKRRRISTE--EKLEECMDFATELILA---E 286
Query: 292 KKESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGR 351
K+ + E + L ++A DT SV++ + +L++++P VE+ I EI TV+ E R
Sbjct: 287 KRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGE---R 343
Query: 352 DVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTV 411
D+ +++ +L ++ + E++R P V + + DDV+ G V G+ +
Sbjct: 344 DIK--------IDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVI-DGYPVKKGTNI 394
Query: 412 TYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYL 471
+I + R++F + EF E + +Y F F GPR C GK +A +
Sbjct: 395 ILNIGRMHRLEFFPKPN--EFTLENFAKNVPYRY-------FQPFGFGPRGCAGKYIAMV 445
Query: 472 QMKSIAAEVLLRYHLTVVPGHRVEQKMSLTLFMKYGLMMNVHPRELKPMLEKI 524
MK+I +L R+H+ + G VE + +++HP E K MLE I
Sbjct: 446 MMKAILVTLLRRFHVKTLQGQCVESIQKIH-------DLSLHPDETKNMLEMI 491
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 34/261 (13%)
Query: 247 SLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK-----ESYSDEFL 301
+K +++ + II+ RK A+ DDLL+ + K E DE +
Sbjct: 209 DIKVMNDLVDKIIADRK-------------ASGEQSDDLLTHMLHGKDPETGEPLDDENI 255
Query: 302 QHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPL 361
++ + F++AG +T+S +++ + + +NP V K A E VL V+
Sbjct: 256 RYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVL-----------VDPVP 304
Query: 362 VFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRM 421
+++V +L Y+ L+E LR++P+ P S + D +L + G + I + R
Sbjct: 305 SYKQVKQLKYVGMVLNEALRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRD 364
Query: 422 KFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVL 481
K +WG+D EF+PER+ + Q+ F F G R C+G+ A + + +L
Sbjct: 365 KTVWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRACIGQQFALHEATLVLGMML 419
Query: 482 LRYHLTVVPGHRVEQKMSLTL 502
+ + ++ + +LTL
Sbjct: 420 KHFDFEDHTNYELDIEETLTL 440
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 110/479 (22%), Positives = 202/479 (42%), Gaps = 52/479 (10%)
Query: 27 LSGPRVWPLLGSLPGLFQNS--KRLHDWISDNLRACGGTYQTCI--FAIPVLGRKQGLVT 82
L GP WPLLGSL +F K+ HD +++ + G ++ + F LG L
Sbjct: 26 LPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEA 85
Query: 83 VTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIFNSDGDTWLFQRKTAALEFTTR 141
+ E R + P W+A H G+ +G W QR +A F +
Sbjct: 86 LY----RTESAHPQRLEIKP----WKAYRDHRNEAYGLMILEGQEW--QRVRSA--FQKK 133
Query: 142 TLRQAMARWVSRAIKHRFCPILE----VAQLEAKPVDFQDLLLRMTFDNICGLAFGKDPQ 197
++ + + I LE + + D L + +F++IC + + K
Sbjct: 134 LMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFG 193
Query: 198 TLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSD 257
L + E A+ F A + + F + + + RL +V +L
Sbjct: 194 LLQKETEEE--ALTFITAIKTMMSTFG-KMMVTPVELHKRLNTKVWQAHTLA-----WDT 245
Query: 258 IISTRKLELASRDREQGEAATTTPHDDLLSRFMKKKESYSDEFLQHVALNFILAGRDTSS 317
I + K + +R + + P D L ++ + S + L LA +T++
Sbjct: 246 IFKSVKPCIDNRLQRYSQQ----PGADFLCDIYQQ-DHLSKKELYAAVTELQLAAVETTA 300
Query: 318 VAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALS 377
++ W + +S+NP+ + ++ E+ +VL + + E++ + YLKA L
Sbjct: 301 NSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRA----------EDLRNMPYLKACLK 350
Query: 378 ETLRLYPSVPQDSKHVVSDDVLPTGTF-VPAGSTVTYSIYAIGRMKFIWGEDCLEFKPER 436
E++RL PSVP ++ + VL G + +P G+ +T + +G + + ED +F+PER
Sbjct: 351 ESMRLTPSVPFTTRTLDKPTVL--GEYALPKGTVLTLNTQVLGSSEDNF-EDSHKFRPER 407
Query: 437 WLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVVPGHRVE 495
WL K + + + + F G R+C+G+ LA LQ+ ++ +Y + VE
Sbjct: 408 WL----QKEKKINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVE 462
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 12/211 (5%)
Query: 297 SDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKW 356
SDE + ++ L+ AG DT + A+SW + NPRV+ KI E+ TV+ +R +S
Sbjct: 276 SDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLS-- 333
Query: 357 VEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIY 416
+ L Y++A + ET R VP H + D G ++P G V + +
Sbjct: 334 --------DRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQW 385
Query: 417 AIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSI 476
I + +W EF PER+L+ DG + K + F G R C+G+ +A ++
Sbjct: 386 QINHDQKLWVNPS-EFLPERFLTPDG-AIDKVLSEKVIIFGMGKRKCIGETIARWEVFLF 443
Query: 477 AAEVLLRYHLTVVPGHRVEQKMSLTLFMKYG 507
A +L R +V G +V+ L MK+
Sbjct: 444 LAILLQRVEFSVPLGVKVDMTPIYGLTMKHA 474
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 26/258 (10%)
Query: 246 PSLKHIDEYLSDIISTRKLELASRDREQGEAATT----TPHDDLLSRFMKKKE------- 294
P L HI ++ +K L D E T P DL F+ + E
Sbjct: 206 PVLLHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPE 265
Query: 295 -SYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDV 353
S++DE L+ V + AG T+S ++W L+ +P V+ ++ EI V+ + R ++
Sbjct: 266 SSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEM 325
Query: 354 SKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTY 413
P Y A + E R VP H+ S D+ G +P G+T+
Sbjct: 326 GDQAHMP----------YTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLIT 375
Query: 414 SIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQM 473
++ ++ + + +W E F PE +L G+ + F+ F+AG R CLG+ LA +++
Sbjct: 376 NLSSVLKDEAVW-EKPFRFHPEHFLDAQGHFVKPE---AFLPFSAGRRACLGEPLARMEL 431
Query: 474 KSIAAEVLLRYHLTVVPG 491
+L + +V G
Sbjct: 432 FLFFTSLLQHFSFSVPTG 449
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 311 AGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLI 370
AG DT + A+SW + P ++ KI E+ TV+ R +S + P
Sbjct: 293 AGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLP---------- 342
Query: 371 YLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCL 430
YL+A + ET R +P H + D G ++P V + + + +W ED
Sbjct: 343 YLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELW-EDPS 401
Query: 431 EFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVVP 490
EF+PER+L+ DG K + F G R C+G+ LA ++ A +L + +V P
Sbjct: 402 EFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPP 461
Query: 491 GHRVEQKMSLTLFMKYGLMMNVHPREL 517
G +V+ L MK+ +V R
Sbjct: 462 GVKVDLTPIYGLTMKHARCEHVQARRF 488
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 137/318 (43%), Gaps = 30/318 (9%)
Query: 174 DFQDLLLRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLR 233
D D L R F++I + FG+ QG+ E R +A Q F + L
Sbjct: 154 DISDDLFRFAFESITNVIFGE-----RQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLP 208
Query: 234 KYL-RLGLEVSMGPSLKHIDEYLSDI-ISTRKLELASRDREQGEAATTTPHDDLLSRFM- 290
L RL + + D S I T+ R + + + +L R +
Sbjct: 209 PDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQK----GSVHHDYRGILYRLLG 264
Query: 291 KKKESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRG 350
K S+ D ++ + G DT+S+ + W + +++N +V+D + E+ + +G
Sbjct: 265 DSKMSFED--IKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQG 322
Query: 351 RDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGST 410
+ PL LKA++ ETLRL+P +++V+D VL +PA +
Sbjct: 323 DMATMLQLVPL----------LKASIKETLRLHPISVTLQRYLVNDLVL-RDYMIPAKTL 371
Query: 411 VTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAY 470
V +IYA+GR + D F P RWLS+D N ++ + F G R CLG+ +A
Sbjct: 372 VQVAIYALGREPTFFF-DPENFDPTRWLSKDKNI----TYFRNLGFGWGVRQCLGRRIAE 426
Query: 471 LQMKSIAAEVLLRYHLTV 488
L+M +L + + +
Sbjct: 427 LEMTIFLINMLENFRVEI 444
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 111/258 (43%), Gaps = 26/258 (10%)
Query: 246 PSLKHIDEYLSDIISTRKLELASRDREQGEAATT----TPHDDLLSRFMKKKE------- 294
P +HI ++ +K L D E T P DL F+ + E
Sbjct: 206 PVDRHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPE 265
Query: 295 -SYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDV 353
S++DE L+ V + AG T+S ++W L+ +P V+ ++ EI V+ + R ++
Sbjct: 266 SSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEM 325
Query: 354 SKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTY 413
P Y A + E R VP H+ S D+ G +P G+T+
Sbjct: 326 GDQAHMP----------YTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLIT 375
Query: 414 SIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQM 473
++ ++ + + +W E F PE +L G+ + F+ F+AG R CLG+ LA +++
Sbjct: 376 NLSSVLKDEAVW-EKPFRFHPEHFLDAQGHFVKPE---AFLPFSAGRRACLGEPLARMEL 431
Query: 474 KSIAAEVLLRYHLTVVPG 491
+L + +V G
Sbjct: 432 FLFFTSLLQHFSFSVPTG 449
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 137/318 (43%), Gaps = 30/318 (9%)
Query: 174 DFQDLLLRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLR 233
D D L R F++I + FG+ QG+ E R +A Q F + L
Sbjct: 157 DISDDLFRFAFESITNVIFGE-----RQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLP 211
Query: 234 KYL-RLGLEVSMGPSLKHIDEYLSDI-ISTRKLELASRDREQGEAATTTPHDDLLSRFM- 290
L RL + + D S I T+ R + + + +L R +
Sbjct: 212 PDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQK----GSVHHDYRGILYRLLG 267
Query: 291 KKKESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRG 350
K S+ D ++ + G DT+S+ + W + +++N +V+D + E+ + +G
Sbjct: 268 DSKMSFED--IKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQG 325
Query: 351 RDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGST 410
+ PL LKA++ ETLRL+P +++V+D VL +PA +
Sbjct: 326 DMATMLQLVPL----------LKASIKETLRLHPISVTLQRYLVNDLVL-RDYMIPAKTL 374
Query: 411 VTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAY 470
V +IYA+GR + D F P RWLS+D N ++ + F G R CLG+ +A
Sbjct: 375 VQVAIYALGREPTFFF-DPENFDPTRWLSKDKNI----TYFRNLGFGWGVRQCLGRRIAE 429
Query: 471 LQMKSIAAEVLLRYHLTV 488
L+M +L + + +
Sbjct: 430 LEMTIFLINMLENFRVEI 447
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 14/226 (6%)
Query: 267 ASRDREQGEAATTTPHDDLLSRFMKKKESYSDEFLQHVALNFILAGRDTSSVAMSWFFWL 326
A + R Q + LL K +D+ + + + +LAG+ TSS +W +
Sbjct: 219 AIQKRRQSQEKIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFF 278
Query: 327 VSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSV 386
++++ ++ K E TV E PL ++++ L L + ETLRL P +
Sbjct: 279 LARDKTLQKKCYLEQKTVCGENL---------PPLTYDQLKDLNLLDRCIKETLRLRPPI 329
Query: 387 PQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYE 446
+ + + G +P G V S R+K W E L+F P+R+L QD N
Sbjct: 330 MIMMRMARTPQTV-AGYTIPPGHQVCVSPTVNQRLKDSWVER-LDFNPDRYL-QD-NPAS 385
Query: 447 GHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVVPGH 492
G +++ +V F AG C+G++ AY+Q+K+I + +L Y ++ G+
Sbjct: 386 G-EKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGY 430
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 14/192 (7%)
Query: 295 SYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVS 354
++S E L I+AG +T++ + W ++ P ++ ++ EI +++ G+
Sbjct: 268 TFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEI-DLIMGPNGK--P 324
Query: 355 KWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYS 414
W ++ ++ Y +A L E LR VP H S+D + G +P G+TV +
Sbjct: 325 SW-------DDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITN 377
Query: 415 IYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMK 474
+Y++ + W D F PER+L G Y + V F+ G R CLG+ LA ++M
Sbjct: 378 LYSVHFDEKYW-RDPEVFHPERFLDSSG--YFAKKE-ALVPFSLGRRHCLGEHLARMEMF 433
Query: 475 SIAAEVLLRYHL 486
+L R+HL
Sbjct: 434 LFFTALLQRFHL 445
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 14/192 (7%)
Query: 295 SYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVS 354
++S E L I+AG +T++ + W ++ P ++ ++ EI +++ G+
Sbjct: 268 TFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEI-DLIMGPNGK--P 324
Query: 355 KWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYS 414
W ++ ++ Y +A L E LR VP H S+D + G +P G+TV +
Sbjct: 325 SW-------DDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITN 377
Query: 415 IYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMK 474
+Y++ + W D F PER+L G Y + V F+ G R CLG+ LA ++M
Sbjct: 378 LYSVHFDEKYW-RDPEVFHPERFLDSSG--YFAKKE-ALVPFSLGRRHCLGEHLARMEMF 433
Query: 475 SIAAEVLLRYHL 486
+L R+HL
Sbjct: 434 LFFTALLQRFHL 445
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 15/251 (5%)
Query: 263 KLELASRDREQGEAATTTPHDDLLSRFMKKKESYSDEFLQHVALNFILAGRDTSSVAMSW 322
+LE + R+Q + LL+ + S L+ L + AG +T + A+S
Sbjct: 206 ELEKIIKARQQQPPSEEDALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSS 265
Query: 323 FFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRL 382
F L+ Q+ + +++ E + L + L E + ++ YL L E LRL
Sbjct: 266 FCLLLGQHSDIRERVRQEQNKLQLS-----------QELTAETLKKMPYLDQVLQEVLRL 314
Query: 383 YPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDG 442
P V + ++ D G P G V+Y I ++ D +F PER+ + DG
Sbjct: 315 IPPVGGGFRELIQDCQF-QGFHFPKGWLVSYQISQTHADPDLY-PDPEKFDPERF-TPDG 371
Query: 443 NKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTL 502
+ + + V F G R CLGK+ A L+MK A ++ ++ T++PG +E ++ +
Sbjct: 372 SATH-NPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLELVVTPSP 430
Query: 503 FMKYGLMMNVH 513
K L + +H
Sbjct: 431 RPKDNLRVKLH 441
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 147/359 (40%), Gaps = 49/359 (13%)
Query: 144 RQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLLRMTFDNICGLAFGKDPQTLSQGL 203
R +M WV + + FC + V PV Q +T IC L FG TL
Sbjct: 133 RSSMEPWVDQ-LTQEFCERMRVQ--AGAPVTIQKEFSLLTCSIICYLTFGNKEDTLVHAF 189
Query: 204 PE--NSFAVAFDRATEATLQ-----RFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLS 256
+ +D + L RF +W+L++ ++++ D +
Sbjct: 190 HDCVQDLMKTWDHWSIQILDMVPFLRFFPNPGLWRLKQ------------AIENRDHMVE 237
Query: 257 DIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK-ESYSDEFLQ-HVALNFI---LA 311
+ K + + G+ T D +L +++ E + L+ HV ++ + +
Sbjct: 238 KQLRRHKESMVA-----GQWRDMT--DYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIG 290
Query: 312 GRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIY 371
G +T++ +SW + +P ++ ++ E+ L G S+ + +++ RL
Sbjct: 291 GTETTASTLSWAVAFLLHHPEIQRRLQEELDREL--GPGASCSR-----VTYKDRARLPL 343
Query: 372 LKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLE 431
L A ++E LRL P VP H + G +P G V ++ + +W E E
Sbjct: 344 LNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVW-EQPHE 402
Query: 432 FKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVVP 490
F+P+R+L N +AF G R+CLG+ LA L++ + A +L + L P
Sbjct: 403 FRPDRFLEPGANP-------SALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPP 454
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 283 DDLLSRFMKKKES----YSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIA 338
D LL K+K S Y+ + + + AG +T+S + + ++ + P +E+K+
Sbjct: 246 DCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLH 305
Query: 339 TEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDV 398
EI V+ +R + E P Y+ A + E R VP + H + D
Sbjct: 306 EEIDRVIGPSRIPAIKDRQEMP----------YMDAVVHEIQRFITLVPSNLPHEATRDT 355
Query: 399 LPTGTFVPAGSTVTYSIYAI--GRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAF 456
+ G +P G+ V ++ ++ +F D +FKPE +L+++G K++ D +K F
Sbjct: 356 IFRGYLIPKGTVVVPTLDSVLYDNQEF---PDPEKFKPEHFLNENG-KFKYSDYFK--PF 409
Query: 457 NAGPRICLGKDLAYLQMKSIAAEVLLRYHL 486
+ G R+C G+ LA +++ + +L ++L
Sbjct: 410 STGKRVCAGEGLARMELFLLLCAILQHFNL 439
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 88/173 (50%), Gaps = 20/173 (11%)
Query: 311 AGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEE-PLVFEEVDRL 369
G +T+S+ + W + ++++ V++ + E+ + G D+SK ++ PL
Sbjct: 287 GGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEG-DISKMLQMVPL-------- 337
Query: 370 IYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGR-MKFIWGED 428
LKA++ ETLRL+P ++ SD VL +PA + V +IYA+GR F D
Sbjct: 338 --LKASIKETLRLHPISVTLQRYPESDLVL-QDYLIPAKTLVQVAIYAMGRDPAFFSSPD 394
Query: 429 CLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVL 481
+F P RWLS+D + ++ + F G R C+G+ +A L+M +L
Sbjct: 395 --KFDPTRWLSKDKDLI----HFRNLGFGWGVRQCVGRRIAELEMTLFLIHIL 441
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 294 ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDV 353
E SD + + AG +T++ + W + NP+V+ K+ EI + +R +
Sbjct: 267 ELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTI 326
Query: 354 SKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTY 413
S + +RL+ L+A + E LRL P P H + D V G+ V
Sbjct: 327 S----------DRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVII 376
Query: 414 SIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQM 473
+++A+ + W + +F PER+L+ G + ++ F AGPR C+G+ LA ++
Sbjct: 377 NLWALHHNEKEWHQPD-QFMPERFLNPAGTQLIS-PSVSYLPFGAGPRSCIGEILARQEL 434
Query: 474 KSIAAEVLLRYHLTV 488
I A +L R+ L V
Sbjct: 435 FLIMAWLLQRFDLEV 449
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 160/386 (41%), Gaps = 51/386 (13%)
Query: 116 GDGIFNSDGDTWLFQRKTAALEFTTRTLRQ-AMARWVSRAIKHRF-----CPILEVAQLE 169
G GI S+G W R+ F+ TLR M + R+I+ R C + E+ + +
Sbjct: 90 GFGIVFSNGKKWKEIRR-----FSLMTLRNFGMGK---RSIEDRVQEEARCLVEELRKTK 141
Query: 170 AKPVDFQDLLLRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAI 229
A P D +L + IC + F K Q F E + + +
Sbjct: 142 ASPCDPTFILGCAPCNVICSIIFHKRFDYKDQ---------QFLNLMEKLNENIEILSSP 192
Query: 230 WKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDL---L 286
W ++ Y + P ++ L ++ + L Q P D + L
Sbjct: 193 W-IQVYNNFPALLDYFPGTH--NKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFL 249
Query: 287 SRFMKKKESYSDEF----LQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEIC 342
+ K+K + EF L++ A++ AG +T+S + + L+ ++P V K+ EI
Sbjct: 250 MKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIE 309
Query: 343 TVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTG 402
V+ GR+ S +++ + Y A + E R +P H V+ D+
Sbjct: 310 RVI----GRNRSPCMQD------RSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRN 359
Query: 403 TFVPAGSTVTYSIYAI--GRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGP 460
+P G+T+ S+ ++ +F E F P +L + GN + +Y F+ F+AG
Sbjct: 360 YLIPKGTTILISLTSVLHDNKEFPNPE---MFDPHHFLDEGGNFKKS--KY-FMPFSAGK 413
Query: 461 RICLGKDLAYLQMKSIAAEVLLRYHL 486
RIC+G+ LA +++ +L ++L
Sbjct: 414 RICVGEALAGMELFLFLTSILQNFNL 439
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 166/396 (41%), Gaps = 71/396 (17%)
Query: 116 GDGIFNSDGDTWLFQRKTAALEFTTRTLRQ-AMARWVSRAIKHRF-----CPILEVAQLE 169
G GI S+G W R+ F+ TLR M + R+I+ R C + E+ + +
Sbjct: 92 GFGIVFSNGKKWKEIRR-----FSLMTLRNFGMGK---RSIEDRVQEEARCLVEELRKTK 143
Query: 170 AKPVDFQDLLLRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAI 229
A P D +L + IC + F K FD Q+FL +
Sbjct: 144 ASPCDPTFILGCAPCNVICSIIFHK----------------RFDYKD----QQFL--NLM 181
Query: 230 WKLRKYLRL------GLEVSMGPSLKHI----DEYLSDIISTRKLELASRDREQGEAATT 279
KL + +++ + + P + + ++ L ++ + L Q
Sbjct: 182 EKLNENIKILSSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDMN 241
Query: 280 TPHDDL---LSRFMKKKESYSDEF----LQHVALNFILAGRDTSSVAMSWFFWLVSQNPR 332
P D + L + K+K + EF L++ A++ AG +T+S + + L+ ++P
Sbjct: 242 NPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPE 301
Query: 333 VEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKH 392
V K+ EI V+ GR+ S +++ + Y A + E R +P H
Sbjct: 302 VTAKVQEEIERVI----GRNRSPCMQD------RSHMPYTDAVVHEVQRYIDLLPTSLPH 351
Query: 393 VVSDDVLPTGTFVPAGSTVTYSIYAI--GRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQ 450
V+ D+ +P G+T+ S+ ++ +F E F P +L + GN + +
Sbjct: 352 AVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPE---MFDPHHFLDEGGNFKKS--K 406
Query: 451 YKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHL 486
Y F+ F+AG RIC+G+ LA +++ +L ++L
Sbjct: 407 Y-FMPFSAGKRICVGEALAGMELFLFLTSILQNFNL 441
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 148/373 (39%), Gaps = 51/373 (13%)
Query: 116 GDGIFNSDGDTWLFQRKTAALEFTTRTLRQ-AMARWVSRAIKHRF-----CPILEVAQLE 169
G G+ ++G+ W R+ F+ T+R M + R+++ R C I E+ + +
Sbjct: 91 GYGVIFANGNRWKVLRR-----FSVTTMRDFGMGK---RSVEERIQEEAQCLIEELRKSK 142
Query: 170 AKPVDFQDLLLRMTFDNICGLAFGKDPQTLSQGLPE--NSFAVAFDRATEATLQRFLLPQ 227
+D L +T + IC + FGK Q + N F F + Q F L
Sbjct: 143 GALMDPTFLFQSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFS 202
Query: 228 AIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLS 287
K G + +L+ I+ Y+ + + RE + + D
Sbjct: 203 GFLKHFP----GAHRQVYKNLQEINAYIGHSVE--------KHRETLDPSAPRDLIDTYL 250
Query: 288 RFMKKKESYSDEFLQHVALNF-----ILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEIC 342
M+K++S + H LN AG +T+S + + F L+ + P V +++ EI
Sbjct: 251 LHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIE 310
Query: 343 TVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTG 402
V+ R ++ + P Y +A + E R +P H+V+ G
Sbjct: 311 QVIGPHRPPELHDRAKMP----------YTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRG 360
Query: 403 TFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDG--NKYEGHDQYKFVAFNAGP 460
+P + V + I + + E F P+ +L +G K E F+ F+ G
Sbjct: 361 YIIPKDTEV-FLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEA-----FIPFSLGK 414
Query: 461 RICLGKDLAYLQM 473
RICLG+ +A ++
Sbjct: 415 RICLGEGIARAEL 427
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 158/387 (40%), Gaps = 47/387 (12%)
Query: 116 GDGIFNSDGDTWLFQRKTAALEFTTRTLRQ-AMARWVSRAIKHRF-----CPILEVAQLE 169
G GI +S+G W R+ F+ TLR M + R+I+ R C + E+ + +
Sbjct: 91 GLGIISSNGKRWKEIRR-----FSLTTLRNFGMGK---RSIEDRVQEEAHCLVEELRKTK 142
Query: 170 AKPVDFQDLLLRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAI 229
A P D +L + IC + F K Q +F R E F + +
Sbjct: 143 ASPCDPTFILGCAPCNVICSVVFQKRFDYKDQ-----NFLTLMKRFNE----NFRILNSP 193
Query: 230 WKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDL---L 286
W ++ L + P ++ L ++ TR Q P D + L
Sbjct: 194 W-IQVCNNFPLLIDCFPGTH--NKVLKNVALTRSYIREKVKEHQASLDVNNPRDFIDCFL 250
Query: 287 SRFMKKKESYSDEF----LQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEIC 342
+ ++K++ EF L + +AG +T+S + + L+ ++P V K+ EI
Sbjct: 251 IKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEID 310
Query: 343 TVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTG 402
V+ GR S +++ + Y A + E R VP H V+ D
Sbjct: 311 HVI----GRHRSPCMQD------RSHMPYTDAVVHEIQRYSDLVPTGVPHAVTTDTKFRN 360
Query: 403 TFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRI 462
+P G+T+ + ++ + + F P +L ++GN ++ D F+ F+AG RI
Sbjct: 361 YLIPKGTTIMALLTSVLHDDKEFPNPNI-FDPGHFLDKNGN-FKKSDY--FMPFSAGKRI 416
Query: 463 CLGKDLAYLQMKSIAAEVLLRYHLTVV 489
C G+ LA +++ +L ++L V
Sbjct: 417 CAGEGLARMELFLFLTTILQNFNLKSV 443
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 283 DDLLSRFMKKKESYSDEF----LQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIA 338
D L + K+K++ EF L A + + AG +T+S + + L+ ++P V K+
Sbjct: 248 DCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQ 307
Query: 339 TEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDV 398
EI V+ GR+ S +++ + Y A + E R +P H V+ DV
Sbjct: 308 EEIERVV----GRNRSPCMQD------RGHMPYTDAVVHEVQRYIDLIPTSLPHAVTCDV 357
Query: 399 LPTGTFVPAGSTVTYSIYAI--GRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAF 456
+P G+T+ S+ ++ +F E F P +L + GN + + F+ F
Sbjct: 358 KFRNYLIPKGTTILTSLTSVLHDNKEFPNPE---MFDPRHFLDEGGNFKKSN---YFMPF 411
Query: 457 NAGPRICLGKDLAYLQMKSIAAEVLLRYHL 486
+AG RIC+G+ LA +++ +L ++L
Sbjct: 412 SAGKRICVGEGLARMELFLFLTFILQNFNL 441
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 47/201 (23%)
Query: 305 ALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFE 364
A+ ++AG +T + A++W F L+S P + ++A
Sbjct: 215 AVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAA-------------------- 254
Query: 365 EVDRLIYLKAALSETLRLYPSV-----PQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIG 419
AA E LRLYP + ++ +D LP GT T+ S Y
Sbjct: 255 --------LAAFQEALRLYPPAWILTRRLERPLLLGEDRLPQGT------TLVLSPYVTQ 300
Query: 420 RMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAE 479
R+ F GE F+PER+L++ G ++ F G R+CLG+D A L+ +
Sbjct: 301 RLYFPEGE---AFQPERFLAERGT-----PSGRYFPFGLGQRLCLGRDFALLEGPIVLRA 352
Query: 480 VLLRYHLTVVPGHRVEQKMSL 500
R+ L +P RV +++L
Sbjct: 353 FFRRFRLDPLPFPRVLAQVTL 373
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 83/201 (41%), Gaps = 47/201 (23%)
Query: 305 ALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFE 364
A+ ++AG +T + A++W F L+S P + ++A
Sbjct: 215 AVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAA-------------------- 254
Query: 365 EVDRLIYLKAALSETLRLYPSV-----PQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIG 419
AA E LRLYP + ++ +D LP GT T+ S Y
Sbjct: 255 --------LAAFQEALRLYPPAWILTRRLERPLLLGEDRLPPGT------TLVLSPYVTQ 300
Query: 420 RMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAE 479
R+ F GE F+PER+L + G ++ F G R+CLG+D A L+ +
Sbjct: 301 RLHFPDGE---AFRPERFLEERGTP-----SGRYFPFGLGQRLCLGRDFALLEGPIVLRA 352
Query: 480 VLLRYHLTVVPGHRVEQKMSL 500
R+ L +P RV +++L
Sbjct: 353 FFRRFRLDPLPFPRVLAQVTL 373
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 22/197 (11%)
Query: 283 DDLLSRFMKKKESYSDEFLQH----VALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIA 338
D L R K K S EF L+ AG +T+S + + F L+ + P V +++
Sbjct: 247 DVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQ 306
Query: 339 TEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDV 398
EI V+ R P ++ ++ Y A + E RL +P H V+ D
Sbjct: 307 KEIEQVIGSHR----------PPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDT 356
Query: 399 LPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDG--NKYEGHDQYKFVAF 456
G +P + V + + + + E F P +L +G + EG F+ F
Sbjct: 357 QFRGYVIPKNTEV-FPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEG-----FMPF 410
Query: 457 NAGPRICLGKDLAYLQM 473
+ G RICLG+ +A ++
Sbjct: 411 SLGKRICLGEGIARTEL 427
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 22/197 (11%)
Query: 283 DDLLSRFMKKKESYSDEFLQH----VALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIA 338
D L R K K S EF L+ AG +T+S + + F L+ + P V +++
Sbjct: 247 DVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQ 306
Query: 339 TEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDV 398
EI V+ R P ++ ++ Y A + E RL +P H V+ D
Sbjct: 307 KEIEQVIGSHR----------PPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDT 356
Query: 399 LPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDG--NKYEGHDQYKFVAF 456
G +P + V + + + + E F P +L +G + EG F+ F
Sbjct: 357 QFRGYVIPKNTEV-FPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEG-----FMPF 410
Query: 457 NAGPRICLGKDLAYLQM 473
+ G RICLG+ +A ++
Sbjct: 411 SLGKRICLGEGIARTEL 427
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 16/174 (9%)
Query: 293 KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRD 352
K S E ++ ++ DT++ + + +++NP V+ + E
Sbjct: 270 KAELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHP 329
Query: 353 VSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVT 412
E PL L+AAL ETLRLYP V + VVS D++ +PAG+ V
Sbjct: 330 QKATTELPL----------LRAALKETLRLYP-VGLFLERVVSSDLVLQNYHIPAGTLVQ 378
Query: 413 YSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGK 466
+Y++GR ++ + P+RWL G+ H V F G R CLG+
Sbjct: 379 VFLYSLGRNAALFPRPE-RYNPQRWLDIRGSGRNFHH----VPFGFGMRQCLGR 427
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 22/197 (11%)
Query: 283 DDLLSRFMKKKESYSDEFLQH----VALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIA 338
D L R K K S EF L+ AG +T+S + + F L+ + P V +++
Sbjct: 247 DVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQ 306
Query: 339 TEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDV 398
EI V+ R P ++ ++ Y A + E RL +P H V+ D
Sbjct: 307 KEIEQVIGSHR----------PPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDT 356
Query: 399 LPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDG--NKYEGHDQYKFVAF 456
G +P + V + + + + E F P +L +G + EG F+ F
Sbjct: 357 QFRGYVIPKNTEV-FPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEG-----FMPF 410
Query: 457 NAGPRICLGKDLAYLQM 473
+ G RICLG+ +A ++
Sbjct: 411 SLGKRICLGEGIARTEL 427
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 22/197 (11%)
Query: 283 DDLLSRFMKKKESYSDEFLQH----VALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIA 338
D L R K K S EF L+ AG +T+S + + F L+ + P V +++
Sbjct: 247 DVYLLRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQ 306
Query: 339 TEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDV 398
EI V+ R P ++ ++ Y A + E RL +P H V+ D
Sbjct: 307 KEIEQVIGSHR----------PPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDT 356
Query: 399 LPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDG--NKYEGHDQYKFVAF 456
G +P + V + + + + E F P +L +G + EG F+ F
Sbjct: 357 QFRGYVIPKNTEV-FPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEG-----FMPF 410
Query: 457 NAGPRICLGKDLAYLQM 473
+ G RICLG+ +A ++
Sbjct: 411 SLGKRICLGEGIARTEL 427
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 85/176 (48%), Gaps = 14/176 (7%)
Query: 311 AGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLI 370
AG +T+S + + L+ ++P V ++ EI V+ GR S +++ R+
Sbjct: 276 AGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVI----GRHRSPCMQD------RSRMP 325
Query: 371 YLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCL 430
Y A + E R +P + H V+ DV F+P G+ + S+ ++ + + +
Sbjct: 326 YTDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKV 385
Query: 431 EFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHL 486
F P +L + GN ++ D F+ F+AG R+C+G+ LA +++ +L + L
Sbjct: 386 -FDPGHFLDESGN-FKKSDY--FMPFSAGKRMCVGEGLARMELFLFLTSILQNFKL 437
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 16/165 (9%)
Query: 311 AGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLI 370
A +DT S A+ W L ++ P V+ ++ E+ V+ GRD P + ++ + L
Sbjct: 290 ASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVV----GRD-----RLPCMGDQPN-LP 339
Query: 371 YLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCL 430
Y+ A L E +R VP H + + G +P + V + +++ W +
Sbjct: 340 YVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKW-PNPE 398
Query: 431 EFKPERWLSQDG--NKYEGHDQYKFVAFNAGPRICLGKDLAYLQM 473
F P R+L +DG NK + + F+ G R C+G++L+ +Q+
Sbjct: 399 NFDPARFLDKDGLINK---DLTSRVMIFSVGKRRCIGEELSKMQL 440
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/433 (20%), Positives = 168/433 (38%), Gaps = 50/433 (11%)
Query: 57 LRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAFH-DLL 115
++ C ++ IF I ++G++ VT+ DP R N P +F +
Sbjct: 30 MQECKRQLKSGIFTINIVGKR---VTIVGDPHEHSRFFLPR--NEVLSPREVYSFMVPVF 84
Query: 116 GDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVA-QLEAKPVD 174
G+G+ + + R L F L A + AI+H + + ++
Sbjct: 85 GEGVAYAAP----YPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEIN 140
Query: 175 FQDLLLRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ M + C FG+D L + L FA A ++ L+P A++
Sbjct: 141 LLEDCSTMIINTACQCLFGED---LRKRLDARRFAQLL-----AKMESSLIPAAVFLPIL 192
Query: 235 YLRLGLEVSMGPSLK-HIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK 293
+ + + + + LS+II RK E ++D ++T+ LLS +
Sbjct: 193 LKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKD-----SSTSDLLSGLLSAVYRDG 247
Query: 294 ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDV 353
S + + + + AG+ TSS+ +W + V+ LE +++
Sbjct: 248 TPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKH----------LEALRKEI 297
Query: 354 SKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFV-PAGSTVT 412
++ + +D + + + E++R P + + V++D + G++V P G +
Sbjct: 298 EEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMAD--VKVGSYVVPKGDIIA 355
Query: 413 YSIYAIGRMKFIWGEDCLEF-KPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYL 471
S + D F +P RW + K EG F+ F AG C+G+ L
Sbjct: 356 CS-------PLLSHHDEEAFPEPRRWDPERDEKVEG----AFIGFGAGVHKCIGQKFGLL 404
Query: 472 QMKSIAAEVLLRY 484
Q+K+I A Y
Sbjct: 405 QVKTILATAFRSY 417
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/433 (20%), Positives = 168/433 (38%), Gaps = 50/433 (11%)
Query: 57 LRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAFH-DLL 115
++ C ++ IF I ++G++ VT+ DP R N P +F +
Sbjct: 42 MQECKRQLKSGIFTINIVGKR---VTIVGDPHEHSRFFLPR--NEVLSPREVYSFMVPVF 96
Query: 116 GDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVA-QLEAKPVD 174
G+G+ + + R L F L A + AI+H + + ++
Sbjct: 97 GEGVAYAAP----YPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEIN 152
Query: 175 FQDLLLRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ M + C FG+D L + L FA A ++ L+P A++
Sbjct: 153 LLEDCSTMIINTACQCLFGED---LRKRLDARRFAQLL-----AKMESSLIPAAVFLPIL 204
Query: 235 YLRLGLEVSMGPSLK-HIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK 293
+ + + + + LS+II RK E ++D ++T+ LLS +
Sbjct: 205 LKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKD-----SSTSDLLSGLLSAVYRDG 259
Query: 294 ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDV 353
S + + + + AG+ TSS+ +W + V+ LE +++
Sbjct: 260 TPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKH----------LEALRKEI 309
Query: 354 SKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFV-PAGSTVT 412
++ + +D + + + E++R P + + V++D + G++V P G +
Sbjct: 310 EEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMAD--VKVGSYVVPKGDIIA 367
Query: 413 YSIYAIGRMKFIWGEDCLEF-KPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYL 471
S + D F +P RW + K EG F+ F AG C+G+ L
Sbjct: 368 CS-------PLLSHHDEEAFPEPRRWDPERDEKVEG----AFIGFGAGVHKCIGQKFGLL 416
Query: 472 QMKSIAAEVLLRY 484
Q+K+I A Y
Sbjct: 417 QVKTILATAFRSY 429
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 89/433 (20%), Positives = 168/433 (38%), Gaps = 50/433 (11%)
Query: 57 LRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAFH-DLL 115
++ C ++ IF I ++G++ VT+ DP R N P +F +
Sbjct: 28 MQECKRQLKSGIFTINIVGKR---VTIVGDPHEHSRFFLPR--NEVLSPREVYSFMVPVF 82
Query: 116 GDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVA-QLEAKPVD 174
G+G+ + + R L F L A + AI+H + + ++
Sbjct: 83 GEGVAYAAP----YPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEIN 138
Query: 175 FQDLLLRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ M + C FG+D L + L FA A ++ L+P A++
Sbjct: 139 LLEDCSTMIINTACQCLFGED---LRKRLDARRFAQLL-----AKMESSLIPAAVFLPIL 190
Query: 235 YLRLGLEVSMGPSLK-HIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK 293
+ + + + + LS+II RK E ++D ++T+ LLS +
Sbjct: 191 LKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKD-----SSTSDLLSGLLSAVYRDG 245
Query: 294 ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDV 353
S + + + + AG+ TSS+ +W + V+ LE +++
Sbjct: 246 TPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKH----------LEALRKEI 295
Query: 354 SKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFV-PAGSTVT 412
++ + +D + + + E++R P + + V++D + G++V P G +
Sbjct: 296 EEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMAD--VKVGSYVVPKGDIIA 353
Query: 413 YSIYAIGRMKFIWGEDCLEF-KPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYL 471
S + D F +P RW + K EG F+ F AG C+G+ L
Sbjct: 354 CS-------PLLSHHDEEAFPEPRRWDPERDEKVEG----AFIGFGAGVHKCIGQKFGLL 402
Query: 472 QMKSIAAEVLLRY 484
Q+K+I A Y
Sbjct: 403 QVKTILATAFRSY 415
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 89/433 (20%), Positives = 168/433 (38%), Gaps = 50/433 (11%)
Query: 57 LRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAFH-DLL 115
++ C ++ IF I ++G++ VT+ DP R N P +F +
Sbjct: 29 MQECKRQLKSGIFTINIVGKR---VTIVGDPHEHSRFFLPR--NEVLSPREVYSFMVPVF 83
Query: 116 GDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVA-QLEAKPVD 174
G+G+ + + R L F L A + AI+H + + ++
Sbjct: 84 GEGVAYAAP----YPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEIN 139
Query: 175 FQDLLLRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ M + C FG+D L + L FA A ++ L+P A++
Sbjct: 140 LLEDCSTMIINTACQCLFGED---LRKRLDARRFAQLL-----AKMESSLIPAAVFLPIL 191
Query: 235 YLRLGLEVSMGPSLK-HIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK 293
+ + + + + LS+II RK E ++D ++T+ LLS +
Sbjct: 192 LKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKD-----SSTSDLLSGLLSAVYRDG 246
Query: 294 ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDV 353
S + + + + AG+ TSS+ +W + V+ LE +++
Sbjct: 247 TPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKH----------LEALRKEI 296
Query: 354 SKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFV-PAGSTVT 412
++ + +D + + + E++R P + + V++D + G++V P G +
Sbjct: 297 EEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMAD--VKVGSYVVPKGDIIA 354
Query: 413 YSIYAIGRMKFIWGEDCLEF-KPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYL 471
S + D F +P RW + K EG F+ F AG C+G+ L
Sbjct: 355 CS-------PLLSHHDEEAFPEPRRWDPERDEKVEG----AFIGFGAGVHKCIGQKFGLL 403
Query: 472 QMKSIAAEVLLRY 484
Q+K+I A Y
Sbjct: 404 QVKTILATAFRSY 416
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 89/433 (20%), Positives = 168/433 (38%), Gaps = 50/433 (11%)
Query: 57 LRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAFH-DLL 115
++ C ++ IF I ++G++ VT+ DP R N P +F +
Sbjct: 29 MQECKRQLKSGIFTINIVGKR---VTIVGDPHEHSRFFLPR--NEVLSPREVYSFMVPVF 83
Query: 116 GDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVA-QLEAKPVD 174
G+G+ + + R L F L A + AI+H + + ++
Sbjct: 84 GEGVAYAAP----YPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEIN 139
Query: 175 FQDLLLRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ M + C FG+D L + L FA A ++ L+P A++
Sbjct: 140 LLEDCSTMIINTACQCLFGED---LRKRLDARRFAQLL-----AKMESSLIPAAVFLPIL 191
Query: 235 YLRLGLEVSMGPSLK-HIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK 293
+ + + + + LS+II RK E ++D ++T+ LLS +
Sbjct: 192 LKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKD-----SSTSDLLSGLLSAVYRDG 246
Query: 294 ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDV 353
S + + + + AG+ TSS+ +W + V+ LE +++
Sbjct: 247 TPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKH----------LEALRKEI 296
Query: 354 SKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFV-PAGSTVT 412
++ + +D + + + E++R P + + V++D + G++V P G +
Sbjct: 297 EEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMAD--VKVGSYVVPKGDIIA 354
Query: 413 YSIYAIGRMKFIWGEDCLEF-KPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYL 471
S + D F +P RW + K EG F+ F AG C+G+ L
Sbjct: 355 CS-------PLLSHHDEEAFPEPRRWDPERDEKVEG----AFIGFGAGVHKCIGQKFGLL 403
Query: 472 QMKSIAAEVLLRY 484
Q+K+I A Y
Sbjct: 404 QVKTILATAFRSY 416
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 167/433 (38%), Gaps = 50/433 (11%)
Query: 57 LRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAFH-DLL 115
++ C ++ IF I ++G++ VT+ DP R N P +F +
Sbjct: 42 MQECKRQLKSGIFTINIVGKR---VTIVGDPHEHSRFFLPR--NEVLSPREVYSFMVPVF 96
Query: 116 GDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVA-QLEAKPVD 174
G+G+ + + R L F L A + AI+H + + ++
Sbjct: 97 GEGVAYAAP----YPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEIN 152
Query: 175 FQDLLLRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRK 234
+ M + C FG+D L + L FA A ++ L+P A++
Sbjct: 153 LLEDCSTMIINTACQCLFGED---LRKRLDARRFAQLL-----AKMESSLIPAAVFLPIL 204
Query: 235 YLRLGLEVSMGPSLK-HIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKK 293
+ + + + + LS+II RK ++D ++T+ LLS +
Sbjct: 205 LKLPLPQSARCHEARTELQKILSEIIIARKAAAVNKD-----SSTSDLLSGLLSAVYRDG 259
Query: 294 ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDV 353
S + + + + AG+ TSS+ +W + V+ LE +++
Sbjct: 260 TPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKH----------LEALRKEI 309
Query: 354 SKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFV-PAGSTVT 412
++ + +D + + + E++R P + + V++D + G++V P G +
Sbjct: 310 EEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMAD--VKVGSYVVPKGDIIA 367
Query: 413 YSIYAIGRMKFIWGEDCLEF-KPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYL 471
S + D F +P RW + K EG F+ F AG C+G+ L
Sbjct: 368 CS-------PLLSHHDEEAFPEPRRWDPERDEKVEG----AFIGFGAGVHKCIGQKFGLL 416
Query: 472 QMKSIAAEVLLRY 484
Q+K+I A Y
Sbjct: 417 QVKTILATAFRSY 429
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 97/467 (20%), Positives = 171/467 (36%), Gaps = 71/467 (15%)
Query: 30 PRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKN 89
P P LG + +N ++ C ++ +F I + G++ VT+ DP
Sbjct: 13 PVTVPFLGHIVQFGKNPLEF-------MQRCKRDLKSGVFTISIGGQR---VTIVGDPHE 62
Query: 90 VEHILKARFDNYPKGPTWQAAFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMAR 149
R + + + G+G+ + + R L F L A +
Sbjct: 63 HSRFFSPRNEILSPREVY-TIMTPVFGEGVAYAAP----YPRMREQLNFLAEELTIAKFQ 117
Query: 150 WVSRAIKHRFCPIL-EVAQLEAKPVDFQDLLLRMTFDNICGLAFGKDPQTLSQGLPENSF 208
AI+H + E + + ++ + M + C FG+D L + L F
Sbjct: 118 NFVPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGED---LRKRLNARHF 174
Query: 209 AVAFDRATEATLQRFLLPQAI---WKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLE 265
A + ++ L+P A+ W LR L L + + + L +II R+ E
Sbjct: 175 AQLLSK-----MESSLIPAAVFMPWLLR--LPLPQSARCREARAELQKILGEIIVAREKE 227
Query: 266 LASRDREQGEAATTTPHDDLLSRFMKKKESYSDEFLQHVALNFILA----GRDTSSVAMS 321
AS+D DLL +K H I+A G+ TS++ S
Sbjct: 228 EASKDNNTS---------DLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTS 278
Query: 322 W--FFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSET 379
W + +N + DK+ EI + +V +D + + + + E+
Sbjct: 279 WSMLHLMHPKNKKWLDKLHKEIDEFPAQLNYDNV------------MDEMPFAERCVRES 326
Query: 380 LRLYPSVPQDSKHVVSDDVLPTGTFV-PAGSTVTYSIYAIGRMKFIWGEDCLEF-KPERW 437
+R P + + V ++ + G++V P G + S + D F P W
Sbjct: 327 IRRDPPLLMVMRMVKAE--VKVGSYVVPKGDIIACS-------PLLSHHDEEAFPNPRLW 377
Query: 438 LSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY 484
+ K +G F+ F AG C+G+ A LQ+K+I A Y
Sbjct: 378 DPERDEKVDG----AFIGFGAGVHKCIGQKFALLQVKTILATAFREY 420
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 97/467 (20%), Positives = 171/467 (36%), Gaps = 71/467 (15%)
Query: 30 PRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKN 89
P P LG + +N ++ C ++ +F I + G++ VT+ DP
Sbjct: 7 PVTVPFLGHIVQFGKNPLEF-------MQRCKRDLKSGVFTISIGGQR---VTIVGDPHE 56
Query: 90 VEHILKARFDNYPKGPTWQAAFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMAR 149
R + + + G+G+ + + R L F L A +
Sbjct: 57 HSRFFSPRNEILSPREVY-TIMTPVFGEGVAYAAP----YPRMREQLNFLAEELTIAKFQ 111
Query: 150 WVSRAIKHRFCPIL-EVAQLEAKPVDFQDLLLRMTFDNICGLAFGKDPQTLSQGLPENSF 208
AI+H + E + + ++ + M + C FG+D L + L F
Sbjct: 112 NFVPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGED---LRKRLNARHF 168
Query: 209 AVAFDRATEATLQRFLLPQAI---WKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLE 265
A + ++ L+P A+ W LR L L + + + L +II R+ E
Sbjct: 169 AQLLSK-----MESSLIPAAVFMPWLLR--LPLPQSARCREARAELQKILGEIIVAREKE 221
Query: 266 LASRDREQGEAATTTPHDDLLSRFMKKKESYSDEFLQHVALNFILA----GRDTSSVAMS 321
AS+D DLL +K H I+A G+ TS++ S
Sbjct: 222 EASKDNNTS---------DLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTS 272
Query: 322 W--FFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSET 379
W + +N + DK+ EI + +V +D + + + + E+
Sbjct: 273 WSMLHLMHPKNKKWLDKLHKEIDEFPAQLNYDNV------------MDEMPFAERCVRES 320
Query: 380 LRLYPSVPQDSKHVVSDDVLPTGTFV-PAGSTVTYSIYAIGRMKFIWGEDCLEF-KPERW 437
+R P + + V ++ + G++V P G + S + D F P W
Sbjct: 321 IRRDPPLLMVMRMVKAE--VKVGSYVVPKGDIIACS-------PLLSHHDEEAFPNPRLW 371
Query: 438 LSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY 484
+ K +G F+ F AG C+G+ A LQ+K+I A Y
Sbjct: 372 DPERDEKVDG----AFIGFGAGVHKCIGQKFALLQVKTILATAFREY 414
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 97/467 (20%), Positives = 171/467 (36%), Gaps = 71/467 (15%)
Query: 30 PRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKN 89
P P LG + +N ++ C ++ +F I + G++ VT+ DP
Sbjct: 22 PVTVPFLGHIVQFGKNPLEF-------MQRCKRDLKSGVFTISIGGQR---VTIVGDPHE 71
Query: 90 VEHILKARFDNYPKGPTWQAAFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMAR 149
R + + + G+G+ + + R L F L A +
Sbjct: 72 HSRFFSPRNEILSPREVY-TIMTPVFGEGVAYAAP----YPRMREQLNFLAEELTIAKFQ 126
Query: 150 WVSRAIKHRFCPIL-EVAQLEAKPVDFQDLLLRMTFDNICGLAFGKDPQTLSQGLPENSF 208
AI+H + E + + ++ + M + C FG+D L + L F
Sbjct: 127 NFVPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGED---LRKRLNARHF 183
Query: 209 AVAFDRATEATLQRFLLPQAI---WKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLE 265
A + ++ L+P A+ W LR L L + + + L +II R+ E
Sbjct: 184 AQLLSK-----MESSLIPAAVFMPWLLR--LPLPQSARCREARAELQKILGEIIVAREKE 236
Query: 266 LASRDREQGEAATTTPHDDLLSRFMKKKESYSDEFLQHVALNFILA----GRDTSSVAMS 321
AS+D DLL +K H I+A G+ TS++ S
Sbjct: 237 EASKDNNTS---------DLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTS 287
Query: 322 W--FFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSET 379
W + +N + DK+ EI + +V +D + + + + E+
Sbjct: 288 WSMLHLMHPKNKKWLDKLHKEIDEFPAQLNYDNV------------MDEMPFAERCVRES 335
Query: 380 LRLYPSVPQDSKHVVSDDVLPTGTFV-PAGSTVTYSIYAIGRMKFIWGEDCLEF-KPERW 437
+R P + + V ++ + G++V P G + S + D F P W
Sbjct: 336 IRRDPPLLMVMRMVKAE--VKVGSYVVPKGDIIACS-------PLLSHHDEEAFPNPRLW 386
Query: 438 LSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY 484
+ K +G F+ F AG C+G+ A LQ+K+I A Y
Sbjct: 387 DPERDEKVDG----AFIGFGAGVHKCIGQKFALLQVKTILATAFREY 429
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 12/109 (11%)
Query: 375 ALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKP 434
A+ E LR P++P + V ++D G +P G+ V + R P
Sbjct: 279 AVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHR------------DP 326
Query: 435 ERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLR 483
+ D + +AF GP CLG LA L++ A + R
Sbjct: 327 RVFADADRFDITVKREAPSIAFGGGPHFCLGTALARLELTEAVAALATR 375
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 12/109 (11%)
Query: 375 ALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKP 434
A+ E LR P++P + V ++D G +P G+ V + R P
Sbjct: 289 AVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHR------------DP 336
Query: 435 ERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLR 483
+ D + +AF GP CLG LA L++ A + R
Sbjct: 337 RVFADADRFDITVKREAPSIAFGGGPHFCLGTALARLELTEAVAALATR 385
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 139/368 (37%), Gaps = 55/368 (14%)
Query: 129 FQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVA-QLEAKPVDFQDLLLRMTFDNI 187
+ R L F L A + + +I+H ++ + ++ D M +
Sbjct: 92 YPRMREQLNFLAEELTVAKFQNFAPSIQHEVRKFMKANWNKDEGEINILDDCSAMIINTA 151
Query: 188 CGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAI---WKLRKYLRLGLEVSM 244
C FG+D L + L FA A ++ L+P A+ W L+ L L
Sbjct: 152 CQCLFGED---LRKRLDARQFAQLL-----AKMESCLIPAAVFLPWILK--LPLPQSYRC 201
Query: 245 GPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKKESYSDEFLQHV 304
+ + + LS+II R+ E A +D T DLL+ + QH
Sbjct: 202 RDARAELQDILSEIIIAREKEEAQKD---------TNTSDLLAGLLGAVYRDGTRMSQHE 252
Query: 305 ALNFILA----GRDTSSVAMSW--FFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVE 358
I+A G+ TS++ +W + +N R K+ EI + +V
Sbjct: 253 VCGMIVAAMFAGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEIDEFPAQLNYDNV----- 307
Query: 359 EPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFV-PAGSTVTYSIYA 417
++ + + + E++R P + + V+ + G +V P G + S
Sbjct: 308 -------MEEMPFAEQCARESIRRDPPLVMLMRKVLKP--VQVGKYVVPEGDIIACSPLL 358
Query: 418 IGRMKFIWGEDCLEFKPERWLS-QDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSI 476
+ + + + E+ PER + DG F F AG C+G+ LQ+K++
Sbjct: 359 SHQDEEAF-PNPREWNPERNMKLVDG---------AFCGFGAGVHKCIGEKFGLLQVKTV 408
Query: 477 AAEVLLRY 484
A VL Y
Sbjct: 409 LATVLRDY 416
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 14/184 (7%)
Query: 306 LNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEE 365
++ + AG TSS SW + ++ + E+ L GR VS F
Sbjct: 251 ISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDE--LYGDGRSVS--------FHA 300
Query: 366 VDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIW 425
+ ++ L+ L ETLRL+P + + V + G + G V S R+ +
Sbjct: 301 LRQIPQLENVLKETLRLHPPLIILMR-VAKGEFEVQGHRIHEGDLVAASPAISNRIPEDF 359
Query: 426 GEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYH 485
D +F P R+ + + + +++ ++ F AG C+G A +Q+K+I + +L Y
Sbjct: 360 -PDPHDFVPARY--EQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYE 416
Query: 486 LTVV 489
+
Sbjct: 417 FEMA 420
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 14/184 (7%)
Query: 306 LNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEE 365
++ + AG TSS SW + ++ + E+ L GR VS F
Sbjct: 251 ISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDE--LYGDGRSVS--------FHA 300
Query: 366 VDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIW 425
+ ++ L+ L ETLRL+P + + V + G + G V S R+ +
Sbjct: 301 LRQIPQLENVLKETLRLHPPLIILMR-VAKGEFEVQGHRIHEGDLVAASPAISNRIPEDF 359
Query: 426 GEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYH 485
D +F P R+ + + + +++ ++ F AG C+G A +Q+K+I + +L Y
Sbjct: 360 -PDPHDFVPARY--EQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYE 416
Query: 486 LTVV 489
+
Sbjct: 417 FEMA 420
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 14/184 (7%)
Query: 306 LNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEE 365
++ + AG TSS SW + ++ + E+ L GR VS F
Sbjct: 251 ISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDE--LYGDGRSVS--------FHA 300
Query: 366 VDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIW 425
+ ++ L+ L ETLRL+P + + V + G + G V S R+ +
Sbjct: 301 LRQIPQLENVLKETLRLHPPLIILMR-VAKGEFEVQGHRIHEGDLVAASPAISNRIPEDF 359
Query: 426 GEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYH 485
D +F P R+ + + + +++ ++ F AG C+G A +Q+K+I + +L Y
Sbjct: 360 -PDPHDFVPARY--EQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYE 416
Query: 486 LTVV 489
+
Sbjct: 417 FEMA 420
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 14/184 (7%)
Query: 306 LNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEE 365
++ + AG TSS SW + ++ + E+ L GR VS F
Sbjct: 251 ISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDE--LYGDGRSVS--------FHA 300
Query: 366 VDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIW 425
+ ++ L+ L ETLRL+P + + V + G + G V S R+ +
Sbjct: 301 LRQIPQLENVLKETLRLHPPLIILMR-VAKGEFEVQGHRIHEGDLVAASPAISNRIPEDF 359
Query: 426 GEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYH 485
D +F P R+ + + + +++ ++ F AG C+G A +Q+K+I + +L Y
Sbjct: 360 -PDPHDFVPARY--EQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYE 416
Query: 486 LTVV 489
+
Sbjct: 417 FEMA 420
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 106/264 (40%), Gaps = 66/264 (25%)
Query: 254 YLSDIISTRKLELASRDREQGEAATTTPHDDLLSR-FMKKKESYSDEFLQHVALNFIL-- 310
Y+ D+I+ ++ E P DDL SR ++++ + + V+L F+L
Sbjct: 200 YIDDLITRKESE---------------PGDDLFSRQIARQRQEGTLDHAGLVSLAFLLLT 244
Query: 311 AGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLI 370
AG +T++ +S + +P E TV+ GR P+ EE+ R
Sbjct: 245 AGHETTANMISLGVVGLLSHP--------EQLTVVKANPGR-------TPMAVEELLR-- 287
Query: 371 YLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCL 430
Y A T RL ++DV G + AG V S+ + W D
Sbjct: 288 YFTIADGVTSRL-----------ATEDVEIGGVSIKAGEGVIVSMLSAN-----W--DPA 329
Query: 431 EFK-PERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVV 489
FK P + G ++ +AF GP CLG++LA ++++ I + L R +
Sbjct: 330 VFKDPAVLDVERGARHH-------LAFGFGPHQCLGQNLARMELQ-IVFDTLFRR----I 377
Query: 490 PGHRVEQKMSLTLFMKYGLMMNVH 513
P R+ M F ++ VH
Sbjct: 378 PSLRLAVPMEDVPFKGDSVIYGVH 401
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 15/107 (14%)
Query: 376 LSETLRLYPSVPQ-DSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKP 434
+ ETLR P+V ++ V+D LP G + G + S YA W ED F
Sbjct: 279 VEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILAS-YAAANRHPDWHEDADTFDA 337
Query: 435 ERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVL 481
R + + +AF G CLG LA +++ ++A E L
Sbjct: 338 TRTVKE------------HLAFGHGVHFCLGAPLARMEV-TLALESL 371
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 62/164 (37%), Gaps = 25/164 (15%)
Query: 332 RVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSK 391
+V +++A EI +V+ G L ++++ K+ + E LR P V
Sbjct: 316 QVHNRLAEEIRSVIKSNGGE---------LTMGAIEKMELTKSVVYECLRFEPPVTAQYG 366
Query: 392 HVVSDDVLPT--GTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHD 449
D V+ + F + Y + + EF PER++ ++G K H
Sbjct: 367 RAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRH- 425
Query: 450 QYKFVAFNAGP---------RICLGKDLAYLQMKSIAAEVLLRY 484
V ++ GP + C GKD L + E+ RY
Sbjct: 426 ----VLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRY 465
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 62/164 (37%), Gaps = 25/164 (15%)
Query: 332 RVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSK 391
+V +++A EI +V+ G L ++++ K+ + E LR P V
Sbjct: 316 QVHNRLAEEIRSVIKSNGGE---------LTMGAIEKMELTKSVVYECLRFEPPVTAQYG 366
Query: 392 HVVSDDVLPT--GTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHD 449
D V+ + F + Y + + EF PER++ ++G K H
Sbjct: 367 RAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRH- 425
Query: 450 QYKFVAFNAGP---------RICLGKDLAYLQMKSIAAEVLLRY 484
V ++ GP + C GKD L + E+ RY
Sbjct: 426 ----VLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRY 465
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 21/135 (15%)
Query: 373 KAALSETLRLYPSVPQDSKHVV----SDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGED 428
A + ETLR S P + HV+ ++DV +PAG + S A+GR + G
Sbjct: 276 SAVVEETLRF--STP--TSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPT 331
Query: 429 CLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLT 487
F R GN++ ++F GP +C G L+ ++ + R+ HL
Sbjct: 332 ADRFDLTR---TSGNRH--------ISFGHGPHVCPGAALSRMEAGVALPALYARFPHLD 380
Query: 488 V-VPGHRVEQKMSLT 501
+ VP + K +T
Sbjct: 381 LAVPAAELRNKPVVT 395
>pdb|3UJH|A Chain A, Crystal Structure Of Substrate-Bound Glucose-6-Phosphate
Isomerase From Toxoplasma Gondii
pdb|3UJH|B Chain B, Crystal Structure Of Substrate-Bound Glucose-6-Phosphate
Isomerase From Toxoplasma Gondii
Length = 567
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 159 FCPILEVAQLEAKPVDFQDLLLRMTFDNICGLAFGKDPQTL-SQGLPE 205
FC +L+ +PV D L+ F LAFGK P+ L +G+PE
Sbjct: 417 FCKSQRAIKLKEEPVSNHDELMSNFFAQPDALAFGKTPEELRKEGIPE 464
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 82/193 (42%), Gaps = 24/193 (12%)
Query: 291 KKKESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRG 350
+++E D+ + + + ++ G T+ +S ++ R + T+LL R
Sbjct: 211 ERREEPRDDLISKLVTDHLVPGNVTTEQLLSTLGITINAG-RETTTSMIALSTLLLLDRP 269
Query: 351 RDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGST 410
++ ++P + + AA+ E LR+ V ++D+ +G VPA
Sbjct: 270 ELPAELRKDPDL---------MPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADD- 319
Query: 411 VTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAY 470
G + + G + PE++ + + D + VAF G C+G+ LA
Sbjct: 320 --------GVIALLAGAN---HDPEQFDDPERVDFHRTDNH-HVAFGYGVHQCVGQHLAR 367
Query: 471 LQMKSIAAEVLLR 483
L+++ +A E LLR
Sbjct: 368 LELE-VALETLLR 379
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 72/219 (32%), Gaps = 52/219 (23%)
Query: 254 YLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKKESYSDEFLQHVALNFILAGR 313
YLSD++ ++ T P D LLS + + D Q
Sbjct: 190 YLSDLLERKR---------------TEPDDALLSSLLAVSDEDGDRLSQE---------- 224
Query: 314 DTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLK 373
VAM+ + V + I + +L R + E+P + +
Sbjct: 225 --ELVAMAMLLLIAGHETTV-NLIGNGVLALLTHPDQRKL--LAEDPSL---------IS 270
Query: 374 AALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFK 433
+A+ E LR V Q ++DV +G +PAG V + A R
Sbjct: 271 SAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDA----------- 319
Query: 434 PERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQ 472
W+ + D V F G CLG LA L+
Sbjct: 320 --DWMPEPDRLDITRDASGGVFFGHGIHFCLGAQLARLE 356
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 37/101 (36%), Gaps = 13/101 (12%)
Query: 372 LKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLE 431
+ +A+ E LR V Q ++DV +G +PAG V + A R
Sbjct: 269 ISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANR----------- 317
Query: 432 FKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQ 472
W+ + D V F G CLG LA L+
Sbjct: 318 --DADWMPEPDRLDITRDASGGVFFGHGIHFCLGAQLARLE 356
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 369 LIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGED 428
+ L A+ E LR V + + V GT +PAG TV + R
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHR-------- 344
Query: 429 CLEFKPERWLSQDGNKYE-GHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLR---- 483
PER+ D ++++ D +AF G C+G LA L+ + IA LL
Sbjct: 345 ----TPERF--PDPHRFDIRRDTAGHLAFGHGIHFCIGAPLARLEAR-IAVRALLERCPD 397
Query: 484 YHLTVVPGHRV 494
L V PG V
Sbjct: 398 LALDVSPGELV 408
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 369 LIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGED 428
+ L A+ E LR V + + V GT +PAG TV + R
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHR-------- 344
Query: 429 CLEFKPERWLSQDGNKYE-GHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLR---- 483
PER+ D ++++ D +AF G C+G LA L+ + IA LL
Sbjct: 345 ----TPERF--PDPHRFDIRRDTAGHLAFGHGIHFCIGAPLARLEAR-IAVRALLERCPD 397
Query: 484 YHLTVVPGHRV 494
L V PG V
Sbjct: 398 LALDVSPGELV 408
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 369 LIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGED 428
+ L A+ E LR V + + V GT +PAG TV + R
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHR-------- 344
Query: 429 CLEFKPERWLSQDGNKYE-GHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLR---- 483
PER+ D ++++ D +AF G C+G LA L+ + IA LL
Sbjct: 345 ----TPERF--PDPHRFDIRRDTAGHLAFGHGIHFCIGAPLARLEAR-IAVRALLERCPD 397
Query: 484 YHLTVVPGHRV 494
L V PG V
Sbjct: 398 LALDVSPGELV 408
>pdb|3M0Z|A Chain A, Crystal Structure Of Putative Aldolase From Klebsiella
Pneumoniae.
pdb|3M0Z|B Chain B, Crystal Structure Of Putative Aldolase From Klebsiella
Pneumoniae.
pdb|3M0Z|C Chain C, Crystal Structure Of Putative Aldolase From Klebsiella
Pneumoniae.
pdb|3M0Z|D Chain D, Crystal Structure Of Putative Aldolase From Klebsiella
Pneumoniae
Length = 249
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 125 DTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLL 179
D WL LE + L+ A+ VS+ I H + I++ A +P D + LL
Sbjct: 187 DFWLEPTGGIDLENYSEILKIALDAGVSKIIPHIYSSIIDKASGNTRPADVRQLL 241
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 14/112 (12%)
Query: 372 LKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLE 431
L A+ E LR V + + +D V GT + AG + + + ++G D
Sbjct: 266 LPGAIEEMLRWTSPVKNMCRTLTADTVF-HGTELRAGEKIMLMFESANFDESVFG-DPDN 323
Query: 432 FKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLR 483
F+ +R + VAF G CLG LA L+++ + VL R
Sbjct: 324 FRIDR------------NPNSHVAFGFGTHFCLGNQLARLELRLMTERVLRR 363
>pdb|1OLM|A Chain A, Supernatant Protein Factor In Complex With
Rrr-Alpha-Tocopherylquinone: A Link Between Oxidized
Vitamin E And Cholesterol Biosynthesis
pdb|1OLM|C Chain C, Supernatant Protein Factor In Complex With
Rrr-Alpha-Tocopherylquinone: A Link Between Oxidized
Vitamin E And Cholesterol Biosynthesis
Length = 403
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 13/92 (14%)
Query: 21 RFMSGSLSG------PRVWPLLGSLPG---LFQNSKRLHDWISDNLRACGGTYQTCIFAI 71
+++SG + G P + ++G L LF SK+ D + +R C Q C
Sbjct: 82 QYLSGGMCGYDLDGCPVWYDIIGPLDAKGLLFSASKQ--DLLRTKMRECELLLQECAHQT 139
Query: 72 PVLGRKQGLVTVT--CDPKNVEHILKARFDNY 101
LGRK +T+ C+ ++H+ K + Y
Sbjct: 140 TKLGRKVETITIIYDCEGLGLKHLWKPAVEAY 171
>pdb|1OLM|E Chain E, Supernatant Protein Factor In Complex With
Rrr-Alpha-Tocopherylquinone: A Link Between Oxidized
Vitamin E And Cholesterol Biosynthesis
Length = 403
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 13/92 (14%)
Query: 21 RFMSGSLSG------PRVWPLLGSLPG---LFQNSKRLHDWISDNLRACGGTYQTCIFAI 71
+++SG + G P + ++G L LF SK+ D + +R C Q C
Sbjct: 82 QYLSGGMCGYDLDGCPVWYDIIGPLDAKGLLFSASKQ--DLLRTKMRECELLLQECAHQT 139
Query: 72 PVLGRKQGLVTVT--CDPKNVEHILKARFDNY 101
LGRK +T+ C+ ++H+ K + Y
Sbjct: 140 TKLGRKVETITIIYDCEGLGLKHLWKPAVEAY 171
>pdb|1QRS|A Chain A, Glutaminyl-Trna Synthetase Mutant D235n Complexed With
Glutamine Transfer Rna
Length = 553
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 9/15 (60%), Positives = 14/15 (93%)
Query: 43 FQNSKRLHDWISDNL 57
FQN++RL+DW+ DN+
Sbjct: 233 FQNNRRLYDWVLDNI 247
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.137 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,339,255
Number of Sequences: 62578
Number of extensions: 689124
Number of successful extensions: 1712
Number of sequences better than 100.0: 114
Number of HSP's better than 100.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 1481
Number of HSP's gapped (non-prelim): 121
length of query: 541
length of database: 14,973,337
effective HSP length: 104
effective length of query: 437
effective length of database: 8,465,225
effective search space: 3699303325
effective search space used: 3699303325
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 54 (25.4 bits)