Query         037522
Match_columns 541
No_of_seqs    200 out of 2090
Neff          10.9
Searched_HMMs 29240
Date          Mon Mar 25 22:43:11 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037522.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037522hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3k9v_A 1,25-dihydroxyvitamin D 100.0 3.3E-73 1.1E-77  577.7  35.0  451   23-515    22-482 (482)
  2 3s79_A Cytochrome P450 19A1; o 100.0 1.4E-71 4.8E-76  568.6  38.6  465    6-522    26-502 (503)
  3 3nxu_A Cytochrome P450 3A4; al 100.0 2.8E-72 9.5E-77  571.1  28.8  452   20-518     9-477 (485)
  4 3pm0_A Cypib1, cytochrome P450 100.0 3.1E-73 1.1E-77  581.6  21.5  466   23-534     7-506 (507)
  5 3ld6_A Lanosterol 14-alpha dem 100.0 1.7E-72 5.8E-77  568.1  24.6  438   26-517    12-455 (461)
  6 3tbg_A Cytochrome P450 2D6; mo 100.0 6.7E-72 2.3E-76  567.7  27.1  449   25-517    10-477 (479)
  7 3n9y_A Cholesterol SIDE-chain  100.0 1.7E-70 5.7E-75  558.3  35.8  456   25-519     9-478 (487)
  8 2fdv_A Cytochrome P450 2A6; CY 100.0 1.5E-70   5E-75  556.2  31.7  449   25-516    10-473 (476)
  9 3e6i_A CYPIIE1, P450-J, cytoch 100.0 2.6E-70 8.9E-75  555.4  28.8  449   24-518     9-474 (476)
 10 1po5_A Cytochrome P450 2B4; ox 100.0 1.1E-70 3.7E-75  557.2  24.6  446   25-517    10-474 (476)
 11 1r9o_A Cytochrome P450 2C9; mo 100.0 2.7E-70 9.4E-75  554.6  23.0  446   25-517    11-475 (477)
 12 3czh_A Cytochrome P450 2R1; vi 100.0 1.2E-69   4E-74  549.8  27.0  450   24-517    11-477 (481)
 13 3swz_A Steroid 17-alpha-hydrox 100.0 6.7E-70 2.3E-74  554.5  24.9  449   25-517     8-480 (494)
 14 2ve3_A Putative cytochrome P45 100.0 2.3E-69 7.7E-74  542.0  28.2  431   22-516     9-444 (444)
 15 2hi4_A Cytochrome P450 1A2; CY 100.0 1.2E-70   4E-75  559.5  18.9  447   27-516    18-488 (495)
 16 2ij2_A Cytochrome P450 BM3; mo 100.0 1.6E-68 5.5E-73  539.5  33.6  442   25-517     3-453 (470)
 17 3mdm_A Cholesterol 24-hydroxyl 100.0 1.3E-67 4.4E-72  532.3  37.4  426   48-519    11-445 (456)
 18 3qz1_A Steroid 21-hydroxylase; 100.0 1.7E-69   6E-74  552.1  15.3  438   25-517    29-485 (496)
 19 2cib_A Cytochrome P450 51; hem 100.0 5.7E-68 1.9E-72  533.6  24.8  437   25-516     4-449 (455)
 20 3dbg_A Putative cytochrome P45 100.0 9.1E-68 3.1E-72  534.4  23.0  435   24-516    22-462 (467)
 21 3i3k_A Lanosterol 14-alpha dem 100.0 8.4E-67 2.9E-71  526.9  26.7  437   24-514    10-453 (461)
 22 3gw9_A Sterol 14alpha-demethyl 100.0 9.7E-67 3.3E-71  525.4  27.1  436   24-516     2-450 (450)
 23 3dax_A Cytochrome P450 7A1; ch 100.0 7.6E-63 2.6E-67  502.5  28.7  451   25-516    13-486 (491)
 24 3v8d_A Cholesterol 7-alpha-mon 100.0 6.9E-63 2.4E-67  502.2  24.3  448   25-514    13-484 (491)
 25 3b6h_A Prostacyclin synthase;  100.0 7.4E-62 2.5E-66  495.7  30.0  452   25-517    18-491 (498)
 26 2cd8_A Cytochrome P450 monooxy 100.0   1E-61 3.6E-66  483.3  21.4  406   12-517    13-430 (436)
 27 3b98_A Prostaglandin I2 syntha 100.0 3.4E-60 1.1E-64  480.9  29.6  432   24-517    17-472 (475)
 28 1n97_A CYP175A1; electron tran 100.0 5.7E-61   2E-65  471.9  18.6  387   28-517     2-388 (389)
 29 1izo_A P450bsbeta, cytochrome  100.0 3.8E-59 1.3E-63  463.8  30.8  399   31-516     6-416 (417)
 30 3awm_A Fatty acid alpha-hydrox 100.0 3.9E-58 1.3E-62  456.3  29.1  399   27-515     4-413 (415)
 31 1jfb_A Nitric-oxide reductase  100.0 1.7E-57 5.9E-62  450.0  30.7  370   27-491     3-382 (404)
 32 2jjn_A Cytochrome P450 113A1;  100.0 2.7E-58 9.2E-63  456.1  23.3  397   14-520     6-411 (411)
 33 1ued_A P450 OXYC, P450 monooxy 100.0 4.4E-58 1.5E-62  453.5  24.2  381   25-512    10-406 (406)
 34 3dsk_A Cytochrome P450 74A, ch 100.0 1.6E-57 5.5E-62  463.4  25.2  413   24-492    27-473 (495)
 35 3dan_A Cytochrome P450 74A2; A 100.0 1.5E-56 5.3E-61  453.7  29.6  416   23-492     7-455 (473)
 36 2uuq_A CYP130, cytochrome P450 100.0   1E-56 3.4E-61  444.3  24.2  372   47-516    25-414 (414)
 37 3ejb_B Biotin biosynthesis cyt 100.0 1.3E-56 4.6E-61  443.6  24.9  381   48-522    14-403 (404)
 38 2zwu_A Camphor 5-monooxygenase 100.0 5.7E-57   2E-61  445.9  21.8  391   23-518     9-413 (415)
 39 3a4g_A Vitamin D hydroxylase;  100.0 1.6E-56 5.6E-61  442.4  25.0  370   48-517    21-403 (411)
 40 1s1f_A Putative cytochrome P45 100.0 1.5E-56   5E-61  442.6  24.2  384   24-512     7-404 (406)
 41 1gwi_A CYP154C1, cytochrome P4 100.0 8.4E-57 2.9E-61  444.8  21.3  373   48-516    18-410 (411)
 42 2zbx_A Cytochrome P450-SU1; be 100.0 3.7E-56 1.3E-60  440.6  25.8  386   26-513     6-407 (412)
 43 1cpt_A Cytochrome P450-TERP; o 100.0 1.4E-56 4.9E-61  446.1  21.5  400   25-515     6-428 (428)
 44 3buj_A CALO2; heme, iron, meta 100.0 6.3E-56 2.2E-60  437.2  24.4  370   48-516    14-397 (397)
 45 3abb_A CYP105D6, cytochrome P4 100.0 5.3E-56 1.8E-60  439.2  23.4  368   48-515    25-407 (408)
 46 2xkr_A CYP142, putative cytoch 100.0 1.1E-55 3.7E-60  435.7  25.4  373   47-517    18-396 (398)
 47 3aba_A Cytochrome P450; oxidor 100.0 1.5E-56 5.3E-61  442.0  19.3  371   48-516    20-403 (403)
 48 4fb2_A P450CIN; heme, monooxyg 100.0 2.3E-56 7.8E-61  440.6  20.4  371   47-519    19-397 (398)
 49 1odo_A Putative cytochrome P45 100.0 1.1E-55 3.8E-60  436.9  24.7  371   48-514    16-407 (408)
 50 1q5d_A P450 epoxidase; cytochr 100.0 7.4E-56 2.5E-60  439.5  21.4  376   48-517    27-418 (419)
 51 1z8o_A 6-deoxyerythronolide B  100.0 3.1E-55 1.1E-59  433.1  25.4  366   48-512    15-402 (404)
 52 2z3t_A Cytochrome P450; monoxy 100.0 1.2E-55 4.2E-60  438.1  22.0  375   48-516    21-417 (425)
 53 2dkk_A Cytochrome P450; CYP158 100.0 4.8E-56 1.7E-60  438.7  18.5  369   48-515    28-410 (411)
 54 2xbk_A PIMD protein; epoxidati 100.0 4.1E-55 1.4E-59  430.6  24.1  362   48-511    27-403 (404)
 55 2wm5_A CYP124, putative cytoch 100.0   9E-55 3.1E-59  432.9  25.4  373   48-512    45-434 (435)
 56 2y5n_A MYCG, P-450-like protei 100.0 4.6E-55 1.6E-59  432.5  22.9  367   48-511    38-416 (417)
 57 3nc3_A Cytochrome P450 CYPX; c 100.0 1.2E-55   4E-60  440.1  16.8  381   48-514    54-440 (441)
 58 3lxh_A Cytochrome P450; heme,  100.0 1.6E-54 5.6E-59  430.3  24.7  375   47-517    38-419 (421)
 59 3oft_A Cytochrome P450, CYP101 100.0   3E-54   1E-58  425.6  25.4  365   47-512    24-394 (396)
 60 3tyw_A Putative cytochrome P45 100.0 2.3E-54 7.8E-59  428.8  24.2  346   48-491    30-389 (417)
 61 2z36_A MOXA, cytochrome P450 t 100.0 8.2E-55 2.8E-59  430.5  20.7  368   48-513    23-408 (413)
 62 3r9b_A Cytochrome P450 164A2;  100.0 1.1E-54 3.7E-59  432.0  20.8  376   47-516    29-418 (418)
 63 3ivy_A Cytochrome P450 CYP125; 100.0 3.8E-54 1.3E-58  428.7  23.6  390   26-517    19-430 (433)
 64 3mgx_A Putative P450 monooxyge 100.0 1.3E-54 4.4E-59  428.7  19.2  370   48-515    38-415 (415)
 65 3oo3_A OXY protein; cytochrome 100.0 1.5E-53 5.2E-58  418.8  26.2  363   47-511    12-383 (384)
 66 3tkt_A Cytochrome P450; aromat 100.0 7.2E-54 2.5E-58  428.6  24.3  380   49-514    47-449 (450)
 67 1lfk_A OXYB, P450 monooxygenas 100.0 3.6E-54 1.2E-58  424.6  21.2  358   56-511    22-397 (398)
 68 3rwl_A Cytochrome P450 alkane  100.0 7.3E-53 2.5E-57  418.0  26.0  374   48-514    39-426 (426)
 69 1n40_A P450 MT2, cytochrome P4 100.0 5.1E-54 1.8E-58  423.0  15.1  362   48-511    17-395 (396)
 70 3b4x_A 367AA long hypothetical 100.0 9.2E-53 3.2E-57  409.3  22.3  352   50-514     2-366 (367)
 71 1io7_A Cytochrome P450 CYP119; 100.0   1E-52 3.4E-57  409.8  22.5  354   50-516     2-368 (368)
 72 2wiy_A XPLA-heme, cytochrome P 100.0 9.1E-52 3.1E-56  406.4  25.6  368   48-512    21-393 (394)
 73 3p3o_A Cytochrome P450; monoox 100.0 5.1E-52 1.8E-56  411.2  20.0  369   48-513    34-414 (416)
 74 2rfb_A Cytochrome P450; heme,  100.0 7.5E-52 2.6E-56  399.6  13.5  319   58-493     2-326 (343)
 75 4dnj_A Putative cytochrome P45 100.0 5.5E-49 1.9E-53  388.4  22.6  382   30-514    17-411 (412)
 76 4dxy_A Cytochrome P450, CYP101 100.0 3.2E-45 1.1E-49  360.5  21.4  369   48-512    38-413 (417)
 77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 1.1E-43 3.9E-48  341.3   1.3  314   27-492    36-362 (381)
 78 1m46_B IQ4, IQ4 motif from MYO  27.1      51  0.0018   16.1   2.1   13  332-344     8-20  (26)
 79 1yvw_A PRA-PH, phosphoribosyl-  24.1 1.4E+02  0.0048   22.3   5.0   27  317-343    64-90  (115)
 80 2a7w_A PRA-PH, phosphoribosyl-  21.9      94  0.0032   23.3   3.7   28  317-344    65-92  (116)
 81 1use_A VAsp, vasodilator-stimu  21.7 1.3E+02  0.0043   18.0   3.4   13  332-344    15-27  (45)

No 1  
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00  E-value=3.3e-73  Score=577.73  Aligned_cols=451  Identities=22%  Similarity=0.378  Sum_probs=364.4

Q ss_pred             hcCCCCCCCCCCcCCChhhhhcc--chhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCC
Q 037522           23 MSGSLSGPRVWPLLGSLPGLFQN--SKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDN  100 (541)
Q Consensus        23 ~~~~~pgP~~~P~lG~~~~~~~~--~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~  100 (541)
                      +.+.+|||+++|++||++.+...  .++++.++.++++|||++|+   +   ++|+.+.|++  +||+++++|+.+. ..
T Consensus        22 pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~---~---~~g~~~~vvv--~dp~~~~~il~~~-~~   92 (482)
T 3k9v_A           22 NVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFR---M---KLGSFDSVHL--GSPSLLEALYRTE-SA   92 (482)
T ss_dssp             EGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEE---E---EETTEEEEEE--CSHHHHHHHHHTC-CS
T ss_pred             CCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEE---E---ccCCCCEEEE--cCHHHHHHHHHhc-CC
Confidence            44579999999999999988653  24688899999999999877   3   6688899999  9999999999985 77


Q ss_pred             CCCChhHHH--HHHhh--ccCcceecCChhHHHHHhhhcCCC-CHHHHHHHHHHHHHHHHHhhhhhHHHHhhh-cCccee
Q 037522          101 YPKGPTWQA--AFHDL--LGDGIFNSDGDTWLFQRKTAALEF-TTRTLRQAMARWVSRAIKHRFCPILEVAQL-EAKPVD  174 (541)
Q Consensus       101 ~~~~~~~~~--~~~~~--~g~~l~~~~g~~w~~~R~~~~~~~-~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~-~~~~vd  174 (541)
                      |.+++....  .....  .+.+++..+|+.|+++||++.+.| +.+.+..+ .+.+.+++ +.+++.+.+... .++++|
T Consensus        93 ~~~r~~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~-~~~i~~~~-~~l~~~l~~~~~~~g~~vd  170 (482)
T 3k9v_A           93 HPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKL-DKKINEVL-ADFLERMDELCDERGRIPD  170 (482)
T ss_dssp             SCCCCCCHHHHHHHHHHTCCCCTTTCCHHHHHHHHHHHHHHHTCHHHHGGG-HHHHHHHH-HHHHHHHHHHCCTTSCCTT
T ss_pred             CCCCCCchHHHHHHHhcCCCCCceeCCCchHHHHHHHhhHHhcChHHHHHH-HHHHHHHH-HHHHHHHHHHHhcCCCCCC
Confidence            887764321  11112  357888899999999999999986 77777776 89999999 888888876543 456899


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCccCCCC--CcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHH
Q 037522          175 FQDLLLRMTFDNICGLAFGKDPQTLSQGL--PENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHID  252 (541)
Q Consensus       175 l~~~~~~~~~~~~~~~~fG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~  252 (541)
                      +.+++..+++|+++.++||.+++..+.+.  ....+.+.+.............|.   .+..+++....++..++.+.+.
T Consensus       171 ~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~~~~l~~~~~~~~~~~~~~~~  247 (482)
T 3k9v_A          171 LYSELNKWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGKMMVTPV---ELHKRLNTKVWQAHTLAWDTIF  247 (482)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGGGSSSCH---HHHHHHTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhH---HHHHhcCCHHHHHHHHHHHHHH
Confidence            99999999999999999999987654321  124455555544433322223332   2333333333444555667788


Q ss_pred             HHHHHHHHHHHHHHhccccccccccCCCCchhHHHHHhhcCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChH
Q 037522          253 EYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKKESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPR  332 (541)
Q Consensus       253 ~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~  332 (541)
                      +++.+.+++++++...+           ...|++..++++.. ++++++.+++..+++||+|||+.+++|++++|+.||+
T Consensus       248 ~~~~~~i~~r~~~~~~~-----------~~~d~l~~ll~~~~-l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~  315 (482)
T 3k9v_A          248 KSVKPCIDNRLQRYSQQ-----------PGADFLCDIYQQDH-LSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQ  315 (482)
T ss_dssp             HHHHHHHHHHHHHTTTC-----------TTSCHHHHHHHHTC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred             HHHHHHHHHHHHHhccC-----------CchHHHHHHHhccC-CCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHH
Confidence            88888888887654322           33567877776543 8999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEE
Q 037522          333 VEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVT  412 (541)
Q Consensus       333 ~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~  412 (541)
                      +|+||++||+++++.+          ..++.+++.+||||+|||+||||++|++|...|.+.+ ++.++||.|||||.|.
T Consensus       316 ~q~kl~~Ei~~v~~~~----------~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~r~~~~-d~~~~g~~ip~Gt~v~  384 (482)
T 3k9v_A          316 AQRRLLQEVQSVLPDN----------QTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDK-PTVLGEYALPKGTVLT  384 (482)
T ss_dssp             HHHHHHHHHHHHSCTT----------CCCCGGGGGGCHHHHHHHHHHHHHSCSCCEEEEECSS-CEEETTEEECTTCEEE
T ss_pred             HHHHHHHHHHHHhCCC----------CCCCHHHHhhCHHHHHHHHHHhhcCCCCcCcccccCC-ceeeCCEEECCCCEEE
Confidence            9999999999998764          5678999999999999999999999999986555554 5556999999999999


Q ss_pred             EehhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhceEEEeCCc
Q 037522          413 YSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVVPGH  492 (541)
Q Consensus       413 ~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~  492 (541)
                      ++.+++||||++| +||++|+||||+++++    ...+..|+|||+|+|.|+|++||+.|+++++++|+++|++++.++.
T Consensus       385 ~~~~~~~~d~~~~-~~p~~F~PeRfl~~~~----~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~  459 (482)
T 3k9v_A          385 LNTQVLGSSEDNF-EDSHKFRPERWLQKEK----KINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNE  459 (482)
T ss_dssp             EECSGGGGCTTTC-SSTTSCCGGGGTCTTS----CCCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCCC
T ss_pred             EccccccCCCccC-CCcCccCccccCCCCC----CCCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCCC
Confidence            9999999999999 9999999999998653    1356789999999999999999999999999999999999998777


Q ss_pred             ccceeeeeEEecCCceeEEEeeC
Q 037522          493 RVEQKMSLTLFMKYGLMMNVHPR  515 (541)
Q Consensus       493 ~~~~~~~~~~~~~~~~~v~~~~r  515 (541)
                      ++......+..|+.+++|++++|
T Consensus       460 ~~~~~~~~~~~p~~~~~~~~~~R  482 (482)
T 3k9v_A          460 PVEMLHLGILVPSRELPIAFRPR  482 (482)
T ss_dssp             CCCEEESSSEEESSSCCEEEEEC
T ss_pred             CcccccceeecCCCCcceEEeeC
Confidence            77777777888999999999987


No 2  
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00  E-value=1.4e-71  Score=568.62  Aligned_cols=465  Identities=21%  Similarity=0.314  Sum_probs=351.6

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCChhhhhccc-hhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEec
Q 037522            6 ALMILSATVAYLLWFRFMSGSLSGPRVWPLLGSLPGLFQNS-KRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVT   84 (541)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~pgP~~~P~lG~~~~~~~~~-~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~   84 (541)
                      ++++++++++++++.+++++.||||+++|++||++++.... ...+..+.++++|||++|+   +   ++|+.+.+++  
T Consensus        26 ~llll~~~~~~~~~~~~~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~---~---~~g~~~~vvv--   97 (503)
T 3s79_A           26 MPVLLLTGLFLLVWNYEGTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMR---V---WISGEETLII--   97 (503)
T ss_dssp             -------------------CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEE---E---ESSSSEEEEE--
T ss_pred             HHHHHHHHHHHHHHHHhccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEE---E---EeCCccEEEE--
Confidence            33334444444555666677999999999999999986432 2355678889999999877   3   6789999999  


Q ss_pred             CChhhHHHHHhccCCCCCCChhHHHHHH--hhccCcc-eecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhh
Q 037522           85 CDPKNVEHILKARFDNYPKGPTWQAAFH--DLLGDGI-FNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCP  161 (541)
Q Consensus        85 ~dp~~i~~v~~~~~~~~~~~~~~~~~~~--~~~g~~l-~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~  161 (541)
                      +||+.++++++++  .|.+++.......  ...+.++ +..+|+.|+++|+++.+.|+...++.+ .+.+.+++ +.+++
T Consensus        98 ~~p~~~~~il~~~--~~~~r~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~-~~~~~~~~-~~~l~  173 (503)
T 3s79_A           98 SKSSSMFHIMKHN--HYSSRFGSKLGLQCIGMHEKGIIFNNNPELWKTTRPFFMKALSGPGLVRM-VTVCAESL-KTHLD  173 (503)
T ss_dssp             CCHHHHHHHHHSG--GGCCCCCCHHHHHHHTCTTSSSTTCCCHHHHHHHHHHHHHHTSTHHHHHH-HHHHHHHH-HHHHT
T ss_pred             CCHHHHHHHHhcC--CCCCcchhhhhhhhhccCCCceeeCCCccHHHHHHHhhhHhhChHHHHHH-HHHHHHHH-HHHHH
Confidence            9999999999753  4655543222111  1234554 566899999999999999999999886 88888888 77777


Q ss_pred             HHHHhhhcCcceeHHHHHHHHHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccc
Q 037522          162 ILEVAQLEAKPVDFQDLLLRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLE  241 (541)
Q Consensus       162 ~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  241 (541)
                      .+.+..+.++++|+.+++..+++++++.++||.+++.       .++.+.+.............+..+..    ++ ...
T Consensus       174 ~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~  241 (503)
T 3s79_A          174 RLEEVTNESGYVDVLTLLRRVMLDTSNTLFLRIPLDE-------SAIVVKIQGYFDAWQALLIKPDIFFK----IS-WLY  241 (503)
T ss_dssp             TGGGTBCTTSCBCHHHHHHHHHHHHHHHHHTCCCCCH-------HHHHHHHHHHHHHHHHHTTCCHHHHH----SG-GGT
T ss_pred             HHHHHhcCCCeEcHHHHHHHHHHHHHHHHHcCcccCc-------hhHHHHHHHHHHHHHHHhcCcHHHhh----cc-hhH
Confidence            7765444567899999999999999999999998742       33444444444333322222322211    11 223


Q ss_pred             cccccchHHHHHHHHHHHHHHHHHHhccccccccccCCCCchhHHHHHhh--cCCCCCHHHHHHHHHHHHHhccccHHHH
Q 037522          242 VSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMK--KKESYSDEFLQHVALNFILAGRDTSSVA  319 (541)
Q Consensus       242 ~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~~~~l~~~~i~~~~~~~~~ag~~tt~~~  319 (541)
                      ++..++.+.+.+++.+.++++++....+.    ..   ....|+++.+++  +++.++++++.+.+..+++||+|||+++
T Consensus       242 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~---~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~AG~~Tta~~  314 (503)
T 3s79_A          242 KKYEKSVKDLKDAIEVLIAEKRRRISTEE----KL---EECMDFATELILAEKRGDLTRENVNQCILEMLIAAPDTMSVS  314 (503)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTCT----TT---TTTCCHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhccc----cc---chHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHcccHHHHH
Confidence            45566778899999999999887765431    00   133489998885  3445999999999999999999999999


Q ss_pred             HHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccc
Q 037522          320 MSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVL  399 (541)
Q Consensus       320 l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~  399 (541)
                      ++|++++|+.||++|+|+++||++++++           ..++.+++.+||||+|+|+||||++|++|...|++.+|.+ 
T Consensus       315 l~~~l~~L~~~P~~~~kl~~Ei~~v~~~-----------~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~-  382 (503)
T 3s79_A          315 LFFMLFLIAKHPNVEEAIIKEIQTVIGE-----------RDIKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDV-  382 (503)
T ss_dssp             HHHHHHHHHHCHHHHHHHHHHHHHHTTT-----------SCCCHHHHTTCHHHHHHHHHHHHHSCSSCCEEEECSSCEE-
T ss_pred             HHHHHHHHHhCHHHHHHHHHHHHHHhCC-----------CCCCHHHHhcCHHHHHHHHhhhccCCCcccccccccCCee-
Confidence            9999999999999999999999999873           5689999999999999999999999999998877766655 


Q ss_pred             cCCcccCCCCEEEEehhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHH
Q 037522          400 PTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAE  479 (541)
Q Consensus       400 ~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~  479 (541)
                      ++||.|||||.|.++.+++||| ++| +||++|+||||++..       ....|+|||+|+|.|+|++||..|++++++.
T Consensus       383 ~~g~~ip~Gt~v~~~~~~~~~d-~~~-~dp~~F~PeRf~~~~-------~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~  453 (503)
T 3s79_A          383 IDGYPVKKGTNIILNIGRMHRL-EFF-PKPNEFTLENFAKNV-------PYRYFQPFGFGPRGCAGKYIAMVMMKAILVT  453 (503)
T ss_dssp             ETTEEECTTCEEEECHHHHTTT-SSC-SSTTSCCGGGGSSCC-------CTTTCCSSCCSTTSCTTHHHHHHHHHHHHHH
T ss_pred             ECCEEECCCCEEEeehHHhCCC-ccC-CChhhCChhhcCCCC-------CcccccCCCCCCCCCCcHHHHHHHHHHHHHH
Confidence            4999999999999999999998 999 999999999999642       2446999999999999999999999999999


Q ss_pred             HHhhceEEEeCCc---ccceeeeeEEecCCc---eeEEEeeCCCCCccc
Q 037522          480 VLLRYHLTVVPGH---RVEQKMSLTLFMKYG---LMMNVHPRELKPMLE  522 (541)
Q Consensus       480 ll~~f~~~~~~~~---~~~~~~~~~~~~~~~---~~v~~~~r~~~~~~~  522 (541)
                      |+++|+|++.++.   +.....+++..|.++   ++|++++|+.++-.|
T Consensus       454 ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~v~~~~R~~~~~~~  502 (503)
T 3s79_A          454 LLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNMLEMIFTPRNSDRCLE  502 (503)
T ss_dssp             HHTTEEEEESTTCCTTTSCEEESSSEEECTTSCCCCEEEEECC------
T ss_pred             HHHheEEEeCCCCCccccccccceeecCCCccceeeEEeccCCchhhhc
Confidence            9999999998764   334455677777775   999999998765443


No 3  
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00  E-value=2.8e-72  Score=571.11  Aligned_cols=452  Identities=21%  Similarity=0.362  Sum_probs=349.5

Q ss_pred             HHHhcCCCCCCCCCCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhcc-C
Q 037522           20 FRFMSGSLSGPRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKAR-F   98 (541)
Q Consensus        20 ~~~~~~~~pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~-~   98 (541)
                      .+++++.+|||+++|++||++++..   +++.++.++++|||++|+   +   ++|+.+.|+|  +||+.+++++.++ .
T Consensus         9 ~~~k~~~~PGP~~~PliGn~~~~~~---~~~~~~~~~~~~yG~i~~---~---~~g~~~~vvv--~dp~~i~~il~~~~~   77 (485)
T 3nxu_A            9 GLFKKLGIPGPTPLPFLGNILSYHK---GFCMFDMECHKKYGKVWG---F---YDGQQPVLAI--TDPDMIKTVLVKECY   77 (485)
T ss_dssp             THHHHHTCCCCCCBTTTBTGGGGGG---CHHHHHHHHHHHHCSEEE---E---EETTEEEEEE--CCHHHHHHHHTTTTT
T ss_pred             hHHhhCCCCCCCCcCeecCcHHhhc---ChHHHHHHHHHHcCCeEE---E---EeCCCCEEEE--CCHHHHHHHHhccch
Confidence            4566778999999999999999864   478888999999999877   3   6788899999  9999999999876 4


Q ss_pred             CCCCCChhHHHHHHhhccCcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHH
Q 037522           99 DNYPKGPTWQAAFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDL  178 (541)
Q Consensus        99 ~~~~~~~~~~~~~~~~~g~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~  178 (541)
                      ..|.+++....  ....+.+++..+|+.|+++|+++++.|+.+.++.+ .+.+.+++ +.+++.+.+....++++|+.++
T Consensus        78 ~~f~~r~~~~~--~~~~~~~l~~~~g~~w~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~~~~~g~~~d~~~~  153 (485)
T 3nxu_A           78 SVFTNRRPFGP--VGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEM-VPIIAQYG-DVLVRNLRREAETGKPVTLKDV  153 (485)
T ss_dssp             TTCCCCCCCSC--CGGGGGSTTTCCHHHHHHHHHHHGGGGCHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHTCCEEHHHH
T ss_pred             hhccCCccccc--ccccccCccccCCcHHHHHHhhcChhcCHHHHHHH-HHHHHHHH-HHHHHHHHHHhccCCcCcHHHH
Confidence            66766543321  12456788889999999999999999999999997 89999999 8888888765556788999999


Q ss_pred             HHHHHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHH------HHHhhhchHHHHHHHHHhhhccccccccchHHHH
Q 037522          179 LLRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEA------TLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHID  252 (541)
Q Consensus       179 ~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~  252 (541)
                      +..+++|+++.++||.+++..+...  +.+.+........      ......+| ++.++..+++.      ....+.+.
T Consensus       154 ~~~~~~dvi~~~~fG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~------~~~~~~~~  224 (485)
T 3nxu_A          154 FGAYSMDVITSTSFGVNIDSLNNPQ--DPFVENTKKLLRFDFLDPFFLSITVFP-FLIPILEVLNI------CVFPREVT  224 (485)
T ss_dssp             HHHHHHHHHHHHHHSCCCCGGGCTT--CHHHHHHTTSCCCCTTSHHHHHHHHCT-THHHHHHHTTC------CSSCHHHH
T ss_pred             HHHHHHHHHHHHHcCCccccccCCC--cHHHHHHHHHhchhhHHHHHHHHHHhh-hhHHHHHHhhh------hhchHHHH
Confidence            9999999999999999987654322  3343333221110      00111122 12222222221      11223444


Q ss_pred             HHHHHHHHHHHHHHhccccccccccCCCCchhHHHHHhhc--------CCCCCHHHHHHHHHHHHHhccccHHHHHHHHH
Q 037522          253 EYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKK--------KESYSDEFLQHVALNFILAGRDTSSVAMSWFF  324 (541)
Q Consensus       253 ~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~--------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l  324 (541)
                      +++.+.+++..+......     .   ....|+++.+++.        +..++++++.++++.+++||+|||+.+++|++
T Consensus       225 ~~~~~~~~~~~~~~~~~~-----~---~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l  296 (485)
T 3nxu_A          225 NFLRKSVKRMKESRLEDT-----Q---KHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIM  296 (485)
T ss_dssp             HHHHHHHHHHHHHHHHCC-----------CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcc-----C---CCcccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence            445555544443322110     0   2446888888852        23489999999999999999999999999999


Q ss_pred             HHHhcChHHHHHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcc
Q 037522          325 WLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTF  404 (541)
Q Consensus       325 ~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~  404 (541)
                      ++|+.||++|++|++|++++++.+          ..++.+++.+||||+|||+|+||++|+++.+.|.+ .+++.++||.
T Consensus       297 ~~L~~~P~~~~kl~~Ei~~~~~~~----------~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~-~~d~~i~g~~  365 (485)
T 3nxu_A          297 YELATHPDVQQKLQEEIDAVLPNK----------APPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVC-KKDVEINGMF  365 (485)
T ss_dssp             HHHHTCHHHHHHHHHHHHHHSTTT----------CCCCHHHHHHCHHHHHHHHHHHHHSCSCSCEEEEC-CSCEEETTEE
T ss_pred             HHHHcCHHHHHHHHHHHHHHhccC----------CCCCHHHHhcChHHHHHHHHHHhcCCCccCcceee-CCCeeECCEE
Confidence            999999999999999999998764          56899999999999999999999999998754444 5555569999


Q ss_pred             cCCCCEEEEehhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc
Q 037522          405 VPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY  484 (541)
Q Consensus       405 Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f  484 (541)
                      |||||.|.++.+++||||++| +||++|+||||+++++   ....+..|+|||+|+|.|+|++||+.|++++++.|+++|
T Consensus       366 Ip~Gt~V~~~~~~~~~d~~~~-~dp~~F~PeR~l~~~~---~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f  441 (485)
T 3nxu_A          366 IPKGVVVMIPSYALHRDPKYW-TEPEKFLPERFSKKNK---DNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNF  441 (485)
T ss_dssp             ECTTCEEEECHHHHHTCTTTC-SSTTSCCGGGGSHHHH---TTSCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTE
T ss_pred             ECCCCEEEEchHHhcCChhhc-CCccCcCccccCCCcc---ccCCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999 9999999999997543   123456799999999999999999999999999999999


Q ss_pred             eEEEeCCcc--cceeeeeEEecCCceeEEEeeCCCC
Q 037522          485 HLTVVPGHR--VEQKMSLTLFMKYGLMMNVHPRELK  518 (541)
Q Consensus       485 ~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~r~~~  518 (541)
                      +|++.++..  .......+..|+.++.|++++|+..
T Consensus       442 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~~~  477 (485)
T 3nxu_A          442 SFKPCKETQIPLKLSLGGLLQPEKPVVLKVESRDGT  477 (485)
T ss_dssp             EEECCTTCCSSCCBCSSSSCCBSSCCEEEEEEC---
T ss_pred             EEEeCCCCCCCcccCCCeeccCCCCeEEEEEEccCC
Confidence            999876643  3334455677888999999999753


No 4  
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00  E-value=3.1e-73  Score=581.59  Aligned_cols=466  Identities=17%  Similarity=0.262  Sum_probs=331.3

Q ss_pred             hcCCCCCCCCCCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCC
Q 037522           23 MSGSLSGPRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYP  102 (541)
Q Consensus        23 ~~~~~pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~  102 (541)
                      ..+.||||+++|++||++++..   +.+.++.++++|||++|+   +   ++|+.+.++|  +||+++++|+.+++..|.
T Consensus         7 ~~~~pPgP~~~P~iG~~~~~~~---~~~~~~~~~~~~yG~i~~---~---~~g~~~~vvv--~dp~~i~~il~~~~~~f~   75 (507)
T 3pm0_A            7 SKGKPPGPFAWPLIGNAAAVGQ---AAHLSFARLARRYGDVFQ---I---RLGSCPIVVL--NGERAIHQALVQQGSAFA   75 (507)
T ss_dssp             ---------------------C---CHHHHHHHHHHHHCSEEE---E---EETTEEEEEE--CSHHHHHHHHTTTTTTSC
T ss_pred             CCCCCcCCCCCCeeCchhhcCc---cHHHHHHHHHHHhCCEEE---E---EECCccEEEE--CCHHHHHHHHHhCcHhhC
Confidence            3457999999999999998864   578899999999999876   3   6788999999  999999999987768888


Q ss_pred             CChhHHHHHHhhccCcc-eecCChhHHHHHhhhcCCCCHHH------HHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeH
Q 037522          103 KGPTWQAAFHDLLGDGI-FNSDGDTWLFQRKTAALEFTTRT------LRQAMARWVSRAIKHRFCPILEVAQLEAKPVDF  175 (541)
Q Consensus       103 ~~~~~~~~~~~~~g~~l-~~~~g~~w~~~R~~~~~~~~~~~------l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl  175 (541)
                      +++..........|.++ +..+|+.|+++|+++.+.|+...      ... +.+.+.+++ +.+++.+.+...++.++|+
T Consensus        76 ~r~~~~~~~~~~~g~~l~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~-~~l~~~l~~~~~~~~~vd~  153 (507)
T 3pm0_A           76 DRPSFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQV-LEGHVLSEA-RELVALLVRGSADGAFLDP  153 (507)
T ss_dssp             BCCCCHHHHHGGGGTCSSSSCSSHHHHHHHHHHHHHHHHSTTSSTTHHHH-HHHHHHHHH-HHHHHHHHHTTGGGCCBCC
T ss_pred             CCCcchHHHhhcCCCceEECCCChHHHHHHHHHHHHHHHhcCCccchHHH-HHHHHHHHH-HHHHHHHHhhcccCCCcCh
Confidence            77655443322345676 44579999999999987553222      223 478888888 8888888765555678999


Q ss_pred             HHHHHHHHHHHHHhhhccCCCCccCCCCCcchHHHH---HHHHHHHHHHh---hhchHHHHHHHHHhhhc---ccccccc
Q 037522          176 QDLLLRMTFDNICGLAFGKDPQTLSQGLPENSFAVA---FDRATEATLQR---FLLPQAIWKLRKYLRLG---LEVSMGP  246 (541)
Q Consensus       176 ~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~p~~~~~~~~~~~~~---~~~~~~~  246 (541)
                      .+++..+++|+++.++||.+++..+     ..+...   ...........   ..+|     +..+++..   ..++..+
T Consensus       154 ~~~~~~~~~dvi~~~~fG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~P-----~l~~lp~~~~~~~~~~~~  223 (507)
T 3pm0_A          154 RPLTVVAVANVMSAVCFGCRYSHDD-----PEFRELLSHNEEFGRTVGAGSLVDVMP-----WLQYFPNPVRTVFREFEQ  223 (507)
T ss_dssp             HHHHHHHHHHHHHHHHTSCCCCTTC-----HHHHHHTSCHHHHHHHHSTTCCTTTCG-----GGGGSCSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHccccCCCCC-----HHHHHHHHHHHHHHHhcccchHHHHhH-----HHHHcCchhHHHHHHHHH
Confidence            9999999999999999999886532     222222   22222221110   1112     11222211   2344456


Q ss_pred             chHHHHHHHHHHHHHHHHHHhccccccccccCCCCchhHHHHHhhc-----C-------CCCCHHHHHHHHHHHHHhccc
Q 037522          247 SLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKK-----K-------ESYSDEFLQHVALNFILAGRD  314 (541)
Q Consensus       247 ~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~-----~-------~~l~~~~i~~~~~~~~~ag~~  314 (541)
                      +.+.+.+++.+.++++++....+          ....|+++.+++.     .       ..++++++.+++..+++||+|
T Consensus       224 ~~~~~~~~~~~~i~~~~~~~~~~----------~~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~d  293 (507)
T 3pm0_A          224 LNRNFSNFILDKFLRHCESLRPG----------AAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQD  293 (507)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCTT----------CCCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccccc----------cCCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccc
Confidence            66778888888888887764332          2346788877741     1       148999999999999999999


Q ss_pred             cHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccc
Q 037522          315 TSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVV  394 (541)
Q Consensus       315 tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~  394 (541)
                      ||+.+++|++++|+.||++|++||+||+++++.+          ..++.+++.+||||+|||+||||++|++|...+|.+
T Consensus       294 Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~----------~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~  363 (507)
T 3pm0_A          294 TLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRD----------RLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHAT  363 (507)
T ss_dssp             HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCTT----------SCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEEC
T ss_pred             hHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCC----------CCCChhhcccChHHHHHHHHHHhcCCCcccCCCccc
Confidence            9999999999999999999999999999998654          567899999999999999999999999998776776


Q ss_pred             cCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHH
Q 037522          395 SDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMK  474 (541)
Q Consensus       395 ~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~  474 (541)
                      .+++.++||.|||||.|+++.+++||||++| +||++|+||||+++++. .....+..|+|||+|+|.|+|++||..|++
T Consensus       364 ~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeRfl~~~~~-~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~  441 (507)
T 3pm0_A          364 TANTSVLGYHIPKDTVVFVNQWSVNHDPLKW-PNPENFDPARFLDKDGL-INKDLTSRVMIFSVGKRRCIGEELSKMQLF  441 (507)
T ss_dssp             SSCEEETTEEECTTCEEEEBSHHHHSCTTTC-SSSSSCCGGGGBCTTSC-BCHHHHTTCCSSCCSTTCCSCHHHHHHHHH
T ss_pred             cCCceEcCEEECCCCEEEeChHHHhCCcccC-CCcCccCCCcccCCCCc-ccCCCcccccCCCCCCCCCCCHHHHHHHHH
Confidence            6777779999999999999999999999999 89999999999986642 111123579999999999999999999999


Q ss_pred             HHHHHHHhhceEEEeCCcccce--eeeeEEecCCceeEEEeeCCC----CCccchhhhcCCcccce
Q 037522          475 SIAAEVLLRYHLTVVPGHRVEQ--KMSLTLFMKYGLMMNVHPREL----KPMLEKICKCGGNYQGV  534 (541)
Q Consensus       475 ~~l~~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~r~~----~~~~~~~~~~~~~~~~~  534 (541)
                      ++++.||++|+|++.++..+..  ..+++..| .++.|++++|..    .....++++.++++||.
T Consensus       442 ~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~~~R~~~~~~~~~~~~~~~~~~~~~~~  506 (507)
T 3pm0_A          442 LFISILAHQCDFRANPNEPAKMNFSYGLTIKP-KSFKVNVTLRESMELLDSAVQNLQAKETCQHHH  506 (507)
T ss_dssp             HHHHHHHHHEEEEECTTCCSCCCEEESSSEEE-CSCCEEEEESSCCSCCC----------------
T ss_pred             HHHHHHHHHeEEecCCCCCCCCCCCCCccccC-CCcEEEEEEccccccccHHHHHHhhcccccccC
Confidence            9999999999999987654433  33445555 468999999984    45889999999999984


No 5  
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00  E-value=1.7e-72  Score=568.05  Aligned_cols=438  Identities=18%  Similarity=0.317  Sum_probs=350.7

Q ss_pred             CCCCCCC-CCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCC
Q 037522           26 SLSGPRV-WPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKG  104 (541)
Q Consensus        26 ~~pgP~~-~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~  104 (541)
                      .||||++ +|++||++++.+   +++.++.++++|||++|+   +   ++++.+.|+|  +||+.+++++.+++..|.++
T Consensus        12 ~PP~~~~~lP~iG~~~~~~~---~~~~~~~~~~~kYG~i~~---~---~~~~~~~vvv--~~~~~i~~il~~~~~~~~~~   80 (461)
T 3ld6_A           12 SPPYIFSPIPFLGHAIAFGK---SPIEFLENAYEKYGPVFS---F---TMVGKTFTYL--LGSDAAALLFNSKNEDLNAE   80 (461)
T ss_dssp             CCCBCCCSSTTTBTHHHHHH---CHHHHHHHHHHHHCSEEE---E---EETTEEEEEE--CSHHHHHHHHHCCTTTEESH
T ss_pred             CCCCCCCCcCeeeeHHHhhh---CHHHHHHHHHHHhCCEEE---E---EECCccEEEE--eCHHHHHHHHhCCccccCCC
Confidence            4666664 999999999865   588999999999999977   3   6788999999  99999999999887788888


Q ss_pred             hhHHHHHHhhccCcc-eecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHHHHH
Q 037522          105 PTWQAAFHDLLGDGI-FNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLLRMT  183 (541)
Q Consensus       105 ~~~~~~~~~~~g~~l-~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  183 (541)
                      +.+.......+|.++ +..+|+.|+++|+++.+.|+.+.++.+ .+.+.+++ +.+++.+.+    +..+|+.+.+..++
T Consensus        81 ~~~~~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~-~~~i~~~~-~~~~~~~~~----~~~~~~~~~~~~~~  154 (461)
T 3ld6_A           81 DVYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQH-VSIIEKET-KEYFESWGE----SGEKNVFEALSELI  154 (461)
T ss_dssp             HHHHHHHHHHHCTTSGGGSCHHHHHHHHHHHHHHSSHHHHHHH-HHHHHHHH-HHHGGGGCS----EEEEEHHHHHHHHH
T ss_pred             cchhhhhhccCCCccccCCCcHHHHHHHHhccccccHHHHhhh-hHHHHHHH-HHHHHHHhh----cCCccHHHHHHHHH
Confidence            877766667778776 557899999999999999999999997 89998888 766666532    45789999999999


Q ss_pred             HHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHH
Q 037522          184 FDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRK  263 (541)
Q Consensus       184 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~  263 (541)
                      +++++.++||.++....    ...+......+...+      ....+.+..+++.....+..++.+.+.+++.+.+++++
T Consensus       155 ~~~i~~~~fG~~~~~~~----~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~  224 (461)
T 3ld6_A          155 ILTASHCLHGKEIRSQL----NEKVAQLYADLDGGF------SHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRR  224 (461)
T ss_dssp             HHHHHHHHTCHHHHHTC----CHHHHHHHHHHHTTS------SHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHcCcchhhhh----hhhhhhhhhhhhhhh------hhHHHhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998765322    122322222221111      11111111222222334445566777777777777664


Q ss_pred             HHHhccccccccccCCCCchhHHHHHhhc----CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHH
Q 037522          264 LELASRDREQGEAATTTPHDDLLSRFMKK----KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIAT  339 (541)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~----~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~  339 (541)
                      +.   .          ...+|+++.|++.    +..++++++.++++.+++||+|||+.+++|++++|+.||++|++||+
T Consensus       225 ~~---~----------~~~~d~l~~ll~~~~~~~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~  291 (461)
T 3ld6_A          225 QS---Q----------EKIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYL  291 (461)
T ss_dssp             TC---C----------CCCCSHHHHHHTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             hc---C----------CCCcchhhhhHHhhhcccCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHH
Confidence            32   1          3456899999863    34599999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhc
Q 037522          340 EICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIG  419 (541)
Q Consensus       340 Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h  419 (541)
                      |+++++++..         ...+.+++++||||+|||+||||++|+++...|++.+|.++ +||.|||||.|+++.+++|
T Consensus       292 Ei~~v~~~~~---------~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~~~  361 (461)
T 3ld6_A          292 EQKTVCGENL---------PPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTV-AGYTIPPGHQVCVSPTVNQ  361 (461)
T ss_dssp             HHHHHHCTTC---------CCCCHHHHHTCHHHHHHHHHHHHHSCSCCCEEEEESSCEEE-TTEEECTTCEEEECHHHHT
T ss_pred             HHHHHhcccc---------cchhHHHHHHHhhhhheeeeccccCCchhccccccccceee-CCcccCCCCeeeechHhhc
Confidence            9999987653         56789999999999999999999999999887777766555 9999999999999999999


Q ss_pred             cCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhceEEEeCCcccceeee
Q 037522          420 RMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVVPGHRVEQKMS  499 (541)
Q Consensus       420 ~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~  499 (541)
                      |||++| +||++|+||||+++++   ....+..|+|||+|+|.|+|++||+.|++++++.||++|+|++.++........
T Consensus       362 ~d~~~~-~dP~~F~PeRfl~~~~---~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~~~~~~~~  437 (461)
T 3ld6_A          362 RLKDSW-VERLDFNPDRYLQDNP---ASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYT  437 (461)
T ss_dssp             TCTTTC-TTTTSCCGGGGGSCCH---HHHSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCS
T ss_pred             CCcccc-CCccccCccccCCCCc---ccCCCCccccCCCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCCCCccccc
Confidence            999999 8999999999998764   223456799999999999999999999999999999999999987764443333


Q ss_pred             eEEecCCceeEEEeeCCC
Q 037522          500 LTLFMKYGLMMNVHPREL  517 (541)
Q Consensus       500 ~~~~~~~~~~v~~~~r~~  517 (541)
                      ....++.++.|++++|+.
T Consensus       438 ~~~~~p~~~~v~~~~Rss  455 (461)
T 3ld6_A          438 TMIHTPENPVIRYKRRST  455 (461)
T ss_dssp             SSSCCBSSCEEEEEECC-
T ss_pred             ceEEcCCceEEEEEECCC
Confidence            444556788999999974


No 6  
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00  E-value=6.7e-72  Score=567.68  Aligned_cols=449  Identities=20%  Similarity=0.300  Sum_probs=331.5

Q ss_pred             CCCCCCCCCCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCC
Q 037522           25 GSLSGPRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKG  104 (541)
Q Consensus        25 ~~~pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~  104 (541)
                      +.||||+++|++||++++..  ++.+..+.++++|||++|+   +   ++|+.++|+|  +||+++++|+.+++..|..+
T Consensus        10 kLPPGP~~lP~iGn~~~~~~--~~~~~~~~~~~~kYG~i~~---~---~~g~~~~vvv--~~p~~i~~vl~~~~~~f~~r   79 (479)
T 3tbg_A           10 KLPPGPLPLPGLGNLLHVDF--QNTPYCFDQLRRRFGDVFS---L---QLAWTPVVVL--NGLAAVREALVTHGEDTADR   79 (479)
T ss_dssp             CCCCCSCCBTTTBTGGGCCT--TSHHHHHHHHHHHHCSEEE---E---EETTEEEEEE--EHHHHHHHHHTTTGGGSCBC
T ss_pred             CCCCCCCCcCcccchHhhcC--CCHHHHHHHHHHHhCCEEE---E---EECCeeEEEE--CCHHHHHHHHHhCChhhcCC
Confidence            46899999999999998854  3577888999999999977   3   6788999999  99999999998876777665


Q ss_pred             hhHHHHH---HhhccCc-ceecCChhHHHHHhhhcCCCCHHHHHH-HHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHH
Q 037522          105 PTWQAAF---HDLLGDG-IFNSDGDTWLFQRKTAALEFTTRTLRQ-AMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLL  179 (541)
Q Consensus       105 ~~~~~~~---~~~~g~~-l~~~~g~~w~~~R~~~~~~~~~~~l~~-~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~  179 (541)
                      +......   ....+.+ ++..+|+.|+++|+.+.+.|+...+.. .+.+.+.... ..+...+..  ..+..+|+..++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~--~~~~~~~~~~~~  156 (479)
T 3tbg_A           80 PPVPITQILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEA-ACLCAAFAN--HSGRPFRPNGLL  156 (479)
T ss_dssp             CCCGGGGGGTCBTTBCCSTTCCSSHHHHHHHHHHHHHHHHTTSTTCHHHHHHHHHH-HHHHHHHHT--TTTCCBCTHHHH
T ss_pred             CchHHHHHhccCCCCCceeeCCCCHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHH-HHHHHHHHh--ccCCcccHHHHH
Confidence            4332111   0111234 455679999999999988776554422 2244554444 555555543  245679999999


Q ss_pred             HHHHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhch-HHH--HHHHHHhhhccccccccchHHHHHHHH
Q 037522          180 LRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLP-QAI--WKLRKYLRLGLEVSMGPSLKHIDEYLS  256 (541)
Q Consensus       180 ~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~  256 (541)
                      ..+++++++.++||.++...+     ..................... ..+  .++...++ ....+.....+...+.+.
T Consensus       157 ~~~~~~~~~~~~fg~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  230 (479)
T 3tbg_A          157 DKAVSNVIASLTCGRRFEYDD-----PRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIP-ALAGKVLRFQKAFLTQLD  230 (479)
T ss_dssp             HHHHHHHHHHHHHSCCCCTTC-----HHHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGSH-HHHHHHTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhcCCcccccc-----hhhhhhhhhhhhhhhhhhhhhhhhhcccchhccch-hhHHHHHHHHHHHHHHHH
Confidence            999999999999999987543     222222222221111100000 000  00000000 111233344455555666


Q ss_pred             HHHHHHHHHHhccccccccccCCCCchhHHHHHhh--------cCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHh
Q 037522          257 DIISTRKLELASRDREQGEAATTTPHDDLLSRFMK--------KKESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVS  328 (541)
Q Consensus       257 ~~i~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--------~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~  328 (541)
                      +.++++.+.....          ....|+++.+..        ....++++++.+++.++++||+|||+.+++|++++|+
T Consensus       231 ~~~~~~~~~~~~~----------~~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~  300 (479)
T 3tbg_A          231 ELLTEHRMTWDPA----------QPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMI  300 (479)
T ss_dssp             HHHHHHHHHCCTT----------SCCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhcc----------cccchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhc
Confidence            6666555543222          123344433331        2335999999999999999999999999999999999


Q ss_pred             cChHHHHHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCC
Q 037522          329 QNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAG  408 (541)
Q Consensus       329 ~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~G  408 (541)
                      .||++|+|||+||+++++.+          ..++.+++.+||||+|||+||||++|++|...|+++.+++.++||.||||
T Consensus       301 ~~P~~q~kl~~Ei~~~~~~~----------~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~G  370 (479)
T 3tbg_A          301 LHPDVQRRVQQEIDDVIGQV----------RRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKG  370 (479)
T ss_dssp             HCHHHHHHHHHHHHHHTCSS----------SCCCHHHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTT
T ss_pred             cCHHHHHHHHHHHHHHHhhc----------cccchhhhccccccccceeeeccccccccccceeecCCCceECCEEecCC
Confidence            99999999999999998664          56899999999999999999999999999999998887777799999999


Q ss_pred             CEEEEehhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhceEEE
Q 037522          409 STVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTV  488 (541)
Q Consensus       409 t~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~  488 (541)
                      |.|+++.+++||||++| +||++|+||||+++++.   ...+..|+|||+|+|.|+|++||++|+++++|.||++|||++
T Consensus       371 t~V~~~~~~~h~d~~~~-~dP~~F~PeRfl~~~~~---~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~  446 (479)
T 3tbg_A          371 TTLITNLSSVLKDEAVW-EKPFRFHPEHFLDAQGH---FVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSV  446 (479)
T ss_dssp             CEEEEEHHHHHTCTTTS-SSTTSCCGGGGBCTTCC---BCCCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEC
T ss_pred             CeeeechhhhcCChhhC-CCccccCccccCCCCcc---cCCCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEe
Confidence            99999999999999999 99999999999987752   235678999999999999999999999999999999999999


Q ss_pred             eCCccc---ceeeeeEEecCCceeEEEeeCCC
Q 037522          489 VPGHRV---EQKMSLTLFMKYGLMMNVHPREL  517 (541)
Q Consensus       489 ~~~~~~---~~~~~~~~~~~~~~~v~~~~r~~  517 (541)
                      ++++..   ....+++..| .+++|+++||++
T Consensus       447 ~~~~~~~~~~~~~~~~~~P-~~~~v~~~pRs~  477 (479)
T 3tbg_A          447 PTGQPRPSHHGVFAFLVSP-SPYELCAVPRHH  477 (479)
T ss_dssp             CTTSCCCCSCEEESSSEEE-CCCCBEEEEC--
T ss_pred             CCCCCCccccccceeeecC-CCeEEEEEECCC
Confidence            876532   2333455666 589999999986


No 7  
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00  E-value=1.7e-70  Score=558.33  Aligned_cols=456  Identities=20%  Similarity=0.299  Sum_probs=356.5

Q ss_pred             CCCCCCCCCCcCCChhhhhcc--chhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCC
Q 037522           25 GSLSGPRVWPLLGSLPGLFQN--SKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYP  102 (541)
Q Consensus        25 ~~~pgP~~~P~lG~~~~~~~~--~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~  102 (541)
                      +.+|||+..|+. +++.+...  ..+++.++.++++|||++|+   +   ++|+.+.|+|  +||+++++|+.++ ..|+
T Consensus         9 ~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~---~---~~g~~~~vvv--~dp~~~~~il~~~-~~f~   78 (487)
T 3n9y_A            9 NEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYR---E---KLGNVESVYV--IDPEDVALLFKSE-GPNP   78 (487)
T ss_dssp             GGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEE---E---EETTEEEEEE--CCHHHHHHHHHTC-CSSC
T ss_pred             hhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceee---c---cCCCCCEEEE--cCHHHHHHHHHhC-CCCC
Confidence            468999988876 77766542  24688899999999999877   3   6788889999  9999999999876 5787


Q ss_pred             CChhHHHH--H--HhhccCcceecCChhHHHHHhhhcCC-CCHHHHHHHHHHHHHHHHHhhhhhHHHHhh----hcCcce
Q 037522          103 KGPTWQAA--F--HDLLGDGIFNSDGDTWLFQRKTAALE-FTTRTLRQAMARWVSRAIKHRFCPILEVAQ----LEAKPV  173 (541)
Q Consensus       103 ~~~~~~~~--~--~~~~g~~l~~~~g~~w~~~R~~~~~~-~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~----~~~~~v  173 (541)
                      +++.....  .  ....+.+++..+|+.|+++|+++++. |+.+.++.+ .+.+.+++ +.+++.+.+..    .++.++
T Consensus        79 ~r~~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~l~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~~~~~~~~~~~~v  156 (487)
T 3n9y_A           79 ERFLIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNF-LPLLDAVS-RDFVSVLHRRIKKAGSGNYSG  156 (487)
T ss_dssp             CCCCCHHHHHHHHHTTCCCCGGGCCHHHHHHHHHHHHHHHTSHHHHTTH-HHHHHHHH-HHHHHHHHHHHHHHTSSSEEE
T ss_pred             CCCCCcHHHHHHHHccccCCCccCCcHHHHHHHHhcCcccCCchHHHHh-hhHHHHHH-HHHHHHHHHHhcccccCCCCc
Confidence            76543321  1  11235678999999999999999995 999999987 89999999 88888776532    234579


Q ss_pred             eHHHHHHHHHHHHHHhhhccCCCCccCCCCCcc---hHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHH
Q 037522          174 DFQDLLLRMTFDNICGLAFGKDPQTLSQGLPEN---SFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKH  250 (541)
Q Consensus       174 dl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  250 (541)
                      |+.+++..+++|+++.++||.+++..+... ..   .+.+.+............+|..   +..+++....++..+..+.
T Consensus       157 d~~~~~~~~t~dvi~~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~---l~~~~~~~~~~~~~~~~~~  232 (487)
T 3n9y_A          157 DISDDLFRFAFESITNVIFGERQGMLEEVV-NPEAQRFIDAIYQMFHTSVPMLNLPPD---LFRLFRTKTWKDHVAAWDV  232 (487)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCCCTTSSSC-CHHHHHHHHHHHHHHHHHGGGTTSCHH---HHHHHCHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhcccccccCCCC-ChHHHHHHHHHHHHHHHHHHHHhcCHH---HHhhcccHHHHHHHHHHHH
Confidence            999999999999999999999998665432 12   2333333333322222223322   2223322223344445566


Q ss_pred             HHHHHHHHHHHHHHHHhccccccccccCCCCchhHHHHHhhcCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcC
Q 037522          251 IDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKKESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQN  330 (541)
Q Consensus       251 l~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~  330 (541)
                      +.+++.+.+++++++...+..   ..   ....|+++.+++++ .++++++.+++..+++||+|||+.+++|++++|+.|
T Consensus       233 ~~~~~~~~i~~~~~~~~~~~~---~~---~~~~d~l~~ll~~~-~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~  305 (487)
T 3n9y_A          233 IFSKADIYTQNFYWELRQKGS---VH---HDYRGILYRLLGDS-KMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARN  305 (487)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCC---CC---SSCCCHHHHHHHSC-SSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHhcCC---cc---cchHHHHHHHHhcC-CCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhC
Confidence            677778888777666543321   00   23468999999764 499999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCE
Q 037522          331 PRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGST  410 (541)
Q Consensus       331 P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~  410 (541)
                      |++|+||++||+++++..          ..++.+++.+||||+|||+||||++|+++.+.|.+.+ +..++||.|||||.
T Consensus       306 P~~~~kl~~Ei~~~~~~~----------~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~R~~~~-d~~~~g~~ip~Gt~  374 (487)
T 3n9y_A          306 LKVQDMLRAEVLAARHQA----------QGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVN-DLVLRDYMIPAKTL  374 (487)
T ss_dssp             HHHHHHHHHHHHHHHHHT----------TTCHHHHTTSCHHHHHHHHHHHHHSCSSSEEEEECSS-CEEETTEEECTTCE
T ss_pred             hHHHHHHHHHHHHhhccc----------ccchhhhhhhCHHHHHHHHHHhhhCCcccccceeecC-ceeeCCEEECCCCE
Confidence            999999999999998765          3456899999999999999999999999865555555 55569999999999


Q ss_pred             EEEehhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhceEEEeC
Q 037522          411 VTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVVP  490 (541)
Q Consensus       411 v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~  490 (541)
                      |+++.+++||||++| +||++|+||||++.++    ...+..++|||+|+|.|+|++||++|++++++.|+++|+|++.+
T Consensus       375 v~~~~~~~~~d~~~~-~dp~~F~PeR~l~~~~----~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~  449 (487)
T 3n9y_A          375 VQVAIYALGREPTFF-FDPENFDPTRWLSKDK----NITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQH  449 (487)
T ss_dssp             EEEEHHHHHTCTTTS-SSTTSCCGGGGTCSCT----TSSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTT
T ss_pred             EEeCcHHhcCCcccC-CCcccCChhhcCCCCC----CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecC
Confidence            999999999999999 9999999999997543    12356799999999999999999999999999999999999987


Q ss_pred             CcccceeeeeEEecCCceeEEEeeCCCCC
Q 037522          491 GHRVEQKMSLTLFMKYGLMMNVHPRELKP  519 (541)
Q Consensus       491 ~~~~~~~~~~~~~~~~~~~v~~~~r~~~~  519 (541)
                      +.++.....++..|+.++.|++++|+...
T Consensus       450 ~~~~~~~~~~~~~p~~~~~~~~~~r~~~~  478 (487)
T 3n9y_A          450 LSDVGTTFNLILMPEKPISFTFWPFNQEA  478 (487)
T ss_dssp             CCCCCEEESSSEEESSCCCEEEEEC----
T ss_pred             CcccccceeeeecCCCCceeEEEECCcch
Confidence            77777777778899999999999998763


No 8  
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00  E-value=1.5e-70  Score=556.22  Aligned_cols=449  Identities=18%  Similarity=0.270  Sum_probs=341.7

Q ss_pred             CCCCCCCCCCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCC
Q 037522           25 GSLSGPRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKG  104 (541)
Q Consensus        25 ~~~pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~  104 (541)
                      +.||||+++|++||++++..  .+++.++.+++++||++|+   +   ++|+.+.+++  +||+.+++|+.++...|.++
T Consensus        10 ~~pPgP~~~p~iG~~~~~~~--~~~~~~~~~l~~~yG~v~~---~---~~~~~~~v~v--~~~~~i~~il~~~~~~f~~~   79 (476)
T 2fdv_A           10 KLPPGPTPLPFIGNYLQLNT--EQMYNSLMKISERYGPVFT---I---HLGPRRVVVL--CGHDAVREALVDQAEEFSGR   79 (476)
T ss_dssp             BCCCCCCCBTTTBTGGGCCT--TBHHHHHHHHHHHHCSEEE---E---EETTEEEEEE--CSHHHHHHHHTTTTTTTCEE
T ss_pred             CCCCCCCCCcccccHhhcCC--cchHHHHHHHHHHhCCEEE---E---EECCccEEEE--CCHHHHHHHHhcChHhhCCC
Confidence            46899999999999998732  3578899999999999876   3   5577788999  99999999997655678765


Q ss_pred             hhHHHHHHhhccCcceecCChhHHHHHhhhcCCCCHHHH--HHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHHHH
Q 037522          105 PTWQAAFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTL--RQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLLRM  182 (541)
Q Consensus       105 ~~~~~~~~~~~g~~l~~~~g~~w~~~R~~~~~~~~~~~l--~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~  182 (541)
                      +..........+.+++..+|+.|+++|+++.+.|+...+  +.+ .+.+.+++ +.+++.+.+.  .++++|+.+++..+
T Consensus        80 ~~~~~~~~~~~~~~l~~~~g~~~~~~Rr~~~~~f~~~~~~~~~~-~~~i~~~~-~~l~~~l~~~--~~~~vd~~~~~~~~  155 (476)
T 2fdv_A           80 GEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGI-EERIQEEA-GFLIDALRGT--GGANIDPTFFLSRT  155 (476)
T ss_dssp             CCCHHHHHHHTTCSSSSCCHHHHHHHHHHHHHHHHHTTTTSHHH-HHHHHHHH-HHHHHHHHHT--TTCCBCCHHHHHHH
T ss_pred             CCcHHHhhhcCCCCeEecCchHHHHHHHHHHHHHHHhCCChhhH-HHHHHHHH-HHHHHHHHhc--CCCccChHHHHHHH
Confidence            432211111236788888999999999999999976655  554 88899888 8888877643  34679999999999


Q ss_pred             HHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHH-HHHhhhccccccccchHHHHHHHHHHHHH
Q 037522          183 TFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKL-RKYLRLGLEVSMGPSLKHIDEYLSDIIST  261 (541)
Q Consensus       183 ~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  261 (541)
                      ++++++.++||.+++..+.+  ...+.+.+.................+++ .++++ ...++..++.+.+.+++.+.+++
T Consensus       156 ~~~vi~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~-~~~~~~~~~~~~~~~~~~~~i~~  232 (476)
T 2fdv_A          156 VSNVISSIVFGDRFDYKDKE--FLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLP-GPQQQAFQLLQGLEDFIAKKVEH  232 (476)
T ss_dssp             HHHHHHHHHHSSCCCTTCHH--HHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSC-SHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCcCCCCCHH--HHHHHHHHHHHHHhhcccccchhhhhhhHHHhcC-cHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999988642210  1222222222222111000000001111 22222 12234455667788888888887


Q ss_pred             HHHHHhccccccccccCCCCchhHHHHHhhc--------CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHH
Q 037522          262 RKLELASRDREQGEAATTTPHDDLLSRFMKK--------KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRV  333 (541)
Q Consensus       262 r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~--------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~  333 (541)
                      +++....           ....|+++.+++.        +..++++++.++++.+++||+|||+.+++|++++|+.||++
T Consensus       233 r~~~~~~-----------~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~  301 (476)
T 2fdv_A          233 NQRTLDP-----------NSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEV  301 (476)
T ss_dssp             HHTTCCT-----------TSCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred             HHHhcCC-----------CCCccHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHH
Confidence            7653211           1345888888752        23589999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEE
Q 037522          334 EDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTY  413 (541)
Q Consensus       334 ~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~  413 (541)
                      |++||+||+++++.+          ..++.+++.+||||+|||+|+||++|+++...+|.+.+++.++||.|||||.|.+
T Consensus       302 ~~~l~~Ei~~~~~~~----------~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~  371 (476)
T 2fdv_A          302 EAKVHEEIDRVIGKN----------RQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYP  371 (476)
T ss_dssp             HHHHHHHHHHHTCSS----------SCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEE
T ss_pred             HHHHHHHHHHhhcCC----------CCCChhhhhcChHHHHHHHHHHHhcCCcccCcceeccCCeeECCEeeCCCCEEEe
Confidence            999999999998653          4578999999999999999999999999965555444556569999999999999


Q ss_pred             ehhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhceEEEeCCcc
Q 037522          414 SIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVVPGHR  493 (541)
Q Consensus       414 ~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~  493 (541)
                      +.+++||||++| +||++||||||++.++..   ..+..|+|||+|+|.|+|++||+.|++++++.|+++|++++.++..
T Consensus       372 ~~~~~~rd~~~~-~dp~~F~PeR~l~~~~~~---~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~  447 (476)
T 2fdv_A          372 MLGSVLRDPSFF-SNPQDFNPQHFLNEKGQF---KKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPK  447 (476)
T ss_dssp             CHHHHHTCTTTC-SSTTSCCGGGGBCTTSCB---CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGG
T ss_pred             ehHHhhCChhhc-CCccccCchhhCCCCCCC---CCCcCcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCC
Confidence            999999999999 999999999999765421   2355799999999999999999999999999999999999977652


Q ss_pred             ---cce-eeeeEEecCCceeEEEeeCC
Q 037522          494 ---VEQ-KMSLTLFMKYGLMMNVHPRE  516 (541)
Q Consensus       494 ---~~~-~~~~~~~~~~~~~v~~~~r~  516 (541)
                         +.. ..+++..| .++.|++++|+
T Consensus       448 ~~~~~~~~~~~~~~p-~~~~v~~~~R~  473 (476)
T 2fdv_A          448 DIDVSPKHVGFATIP-RNYTMSFLPRH  473 (476)
T ss_dssp             GCCCSCSEESSSEEC-CCCCEEEEEC-
T ss_pred             CCCccccccceeecC-CceEEEEEecc
Confidence               223 44556666 68999999996


No 9  
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00  E-value=2.6e-70  Score=555.40  Aligned_cols=449  Identities=20%  Similarity=0.298  Sum_probs=340.4

Q ss_pred             cCCCCCCCCCCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCC
Q 037522           24 SGSLSGPRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPK  103 (541)
Q Consensus        24 ~~~~pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~  103 (541)
                      .+.||||+++|++||++++..  .+++.++.++++|||++|+   +   ++|+.+.++|  +||+.+++++.++...|++
T Consensus         9 ~~lpPgP~~~PliG~~~~~~~--~~~~~~~~~~~~~yG~v~~---~---~~g~~~~vvv--~~~~~v~~il~~~~~~f~~   78 (476)
T 3e6i_A            9 GKLPPGPFPLPIIGNLFQLEL--KNIPKSFTRLAQRFGPVFT---L---YVGSQRMVVM--HGYKAVKEALLDYKDEFSG   78 (476)
T ss_dssp             -CCCCCCCCBTTTBTGGGCCT--TCHHHHHHHHHHHHCSEEE---E---EETTEEEEEE--CSHHHHHHHHHTSTTTTCE
T ss_pred             CCCCcCCCCcccccChhhhcc--ccHhHHHHHHHHHhCCEEE---E---EECCccEEEE--CCHHHHHHHHhcchHhhCC
Confidence            457999999999999998832  3588899999999999876   3   6788899999  9999999999987677877


Q ss_pred             ChhHHHHHHhhccCcceecCChhHHHHHhhhcCCCCHHHH-HHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHHHH
Q 037522          104 GPTWQAAFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTL-RQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLLRM  182 (541)
Q Consensus       104 ~~~~~~~~~~~~g~~l~~~~g~~w~~~R~~~~~~~~~~~l-~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~  182 (541)
                      ++.... +..+.+.+++..+|+.|+++|++..+.|....+ ...+.+.+.+++ +.+++.+.+.  .++++|+.+++..+
T Consensus        79 r~~~~~-~~~~~~~~l~~~~g~~w~~~Rr~~~~~l~~~~~~~~~~~~~i~~~~-~~l~~~l~~~--~~~~~d~~~~~~~~  154 (476)
T 3e6i_A           79 RGDLPA-FHAHRDRGIIFNNGPTWKDIRRFSLTTLRNYGMGKQGNESRIQREA-HFLLEALRKT--QGQPFDPTFLIGCA  154 (476)
T ss_dssp             ECCCGG-GGGGTTSSSTTCCSTTHHHHHHHHHHHHHHTC-CCSHHHHHHHHHH-HHHHHHHHTT--TTSCBCTHHHHTHH
T ss_pred             CCCCch-hheecCCCEEecCCcHHHHHHHHHHHHHHhcCCCchHHHHHHHHHH-HHHHHHHHHh--CCCCcChHHHHHHH
Confidence            654332 233444588889999999999977655533221 011367788888 7777777543  35689999999999


Q ss_pred             HHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhh---h-chHHHHHHHHHhhhccccccccchHHHHHHHHHH
Q 037522          183 TFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRF---L-LPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDI  258 (541)
Q Consensus       183 ~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  258 (541)
                      ++|+++.++||.+++..+     ..+......+........   . ....+..+..+++ ...++..++.+.+.+++.+.
T Consensus       155 ~~dvi~~~~fG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp-~~~~~~~~~~~~~~~~~~~~  228 (476)
T 3e6i_A          155 PCNVIADILFRKHFDYND-----EKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLP-GSHRKVIKNVAEVKEYVSER  228 (476)
T ss_dssp             HHHHHHHHHHSCCCCTTC-----HHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSC-SHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCC-----HHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHH
Confidence            999999999999886532     233333333222221110   0 0001111222222 12344556667788888888


Q ss_pred             HHHHHHHHhccccccccccCCCCchhHHHHHhhc--------CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcC
Q 037522          259 ISTRKLELASRDREQGEAATTTPHDDLLSRFMKK--------KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQN  330 (541)
Q Consensus       259 i~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~--------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~  330 (541)
                      ++++++....+           ...|+++.+++.        +..++++++.++++.+++||+|||+.+++|++++|+.|
T Consensus       229 i~~~~~~~~~~-----------~~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~  297 (476)
T 3e6i_A          229 VKEHHQSLDPN-----------CPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKY  297 (476)
T ss_dssp             HHHHHHTCCTT-----------SCCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHhhcCCCC-----------CCccHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcC
Confidence            88777543221           235777777741        22489999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCE
Q 037522          331 PRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGST  410 (541)
Q Consensus       331 P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~  410 (541)
                      |++|++|++||+++++.+          ..++.+++.+||||+|||+||||++|+++...+|.+.+++.++||.|||||.
T Consensus       298 P~~~~~l~~Ei~~~~~~~----------~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~  367 (476)
T 3e6i_A          298 PEIEEKLHEEIDRVIGPS----------RIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTV  367 (476)
T ss_dssp             HHHHHHHHHHHHHHTTTT----------SCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCE
T ss_pred             HHHHHHHHHHHHHhcCCC----------CCCChhhccCCchHHHHHHHHHHhccCCCccccccCCCCeeEcCEEeCCCCE
Confidence            999999999999998754          5578999999999999999999999999976656555566669999999999


Q ss_pred             EEEehhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhceEEEeC
Q 037522          411 VTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVVP  490 (541)
Q Consensus       411 v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~  490 (541)
                      |+++.+++||||++| +||++|+||||+++++.   ...+..|+|||+|+|.|+|++||++|++++++.|+++|+|++..
T Consensus       368 v~~~~~~~~~d~~~~-~~p~~F~PeR~l~~~~~---~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~  443 (476)
T 3e6i_A          368 VVPTLDSVLYDNQEF-PDPEKFKPEHFLNENGK---FKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLV  443 (476)
T ss_dssp             EEECSHHHHTCTTTS-SSTTSCCGGGGBCTTSS---BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESS
T ss_pred             EEechHHhhCCcccC-CCccccCchhhcCCCCC---ccCccceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCC
Confidence            999999999999999 99999999999986542   12456799999999999999999999999999999999999853


Q ss_pred             -Cccccee---eeeEEecCCceeEEEeeCCCC
Q 037522          491 -GHRVEQK---MSLTLFMKYGLMMNVHPRELK  518 (541)
Q Consensus       491 -~~~~~~~---~~~~~~~~~~~~v~~~~r~~~  518 (541)
                       +.++...   .+++.. +.+++|++++|+..
T Consensus       444 ~~~~~~~~~~~~~~~~~-p~~~~~~~~~R~~~  474 (476)
T 3e6i_A          444 DPKDIDLSPIHIGFGCI-PPRYKLCVIPRSHH  474 (476)
T ss_dssp             CTTTCCCSCSEESSSEE-CCCCCEEEEECC--
T ss_pred             CCCCCCCCcccCccccC-CCCeEEEEEecccc
Confidence             3333222   234444 46899999999763


No 10 
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00  E-value=1.1e-70  Score=557.15  Aligned_cols=446  Identities=18%  Similarity=0.285  Sum_probs=340.2

Q ss_pred             CCCCCCCCCCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCC
Q 037522           25 GSLSGPRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKG  104 (541)
Q Consensus        25 ~~~pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~  104 (541)
                      +.||||+++|++||++.+.  ..+++..+.+++++||++|+   +   ++|+.+.++|  +||+.+++|+.++...|.++
T Consensus        10 ~~pPgP~~~p~iG~~~~~~--~~~~~~~~~~l~~~yG~v~~---~---~~g~~~~v~v--~~~~~i~~il~~~~~~f~~~   79 (476)
T 1po5_A           10 KLPPGPSPLPVLGNLLQMD--RKGLLRSFLRLREKYGDVFT---V---YLGSRPVVVL--CGTDAIREALVDQAEAFSGR   79 (476)
T ss_dssp             CCCCCSCCBTTTBTGGGCC--TTCHHHHHHHHHHHHCSEEE---E---EETTEEEEEE--CSHHHHHHHHTTTTTTTCEE
T ss_pred             CCCcCCCCCCccccHHhcc--CCcHHHHHHHHHHHhCCEEE---E---EECCccEEEE--CCHHHHHHHHHhCcHhhCCC
Confidence            4789999999999999872  24578899999999999877   3   5677788899  99999999997665678765


Q ss_pred             hhHHHHHHh-hccCcceecCChhHHHHHhhhcCCCCHH--HHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHHH
Q 037522          105 PTWQAAFHD-LLGDGIFNSDGDTWLFQRKTAALEFTTR--TLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLLR  181 (541)
Q Consensus       105 ~~~~~~~~~-~~g~~l~~~~g~~w~~~R~~~~~~~~~~--~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~  181 (541)
                      +.... +.. ..+.+++.++|+.|+++|+++.+.|++.  ..+.+ .+.+.+++ +.+++.+.+.  .++++|+.+++..
T Consensus        80 ~~~~~-~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~-~~~i~~~~-~~l~~~l~~~--~~~~~d~~~~~~~  154 (476)
T 1po5_A           80 GKIAV-VDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSV-EERIQEEA-RCLVEELRKS--KGALLDNTLLFHS  154 (476)
T ss_dssp             CCGGG-GCSCCSSCCCCCSSHHHHHHHHHHHHHHHHHSCCCHHHH-HHHHHHHH-HHHHHHHHHT--TTCCBCCHHHHHH
T ss_pred             CCcHH-HHhhcCCCceEecCCcHHHHHHHHHHHHHHHhCCChhHH-HHHHHHHH-HHHHHHHHhc--CCCccCHHHHHHH
Confidence            43221 111 1356788889999999999998888665  33454 88888888 8888877653  3467999999999


Q ss_pred             HHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhh-h--chHHHHHH-HHHhhhccccccccchHHHHHHHHH
Q 037522          182 MTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRF-L--LPQAIWKL-RKYLRLGLEVSMGPSLKHIDEYLSD  257 (541)
Q Consensus       182 ~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~p~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~  257 (541)
                      +++++++.++||.+++..+     ..+......+........ .  .....+|+ .++++ ...++..++.+.+.+++.+
T Consensus       155 ~~~~vi~~~~fG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp-~~~~~~~~~~~~~~~~~~~  228 (476)
T 1po5_A          155 ITSNIICSIVFGKRFDYKD-----PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFP-GTHRQIYRNLQEINTFIGQ  228 (476)
T ss_dssp             HHHHHHHHHHHSSCCCTTC-----HHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSS-CSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCCCC-----HHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcC-cHHHHHHHHHHHHHHHHHH
Confidence            9999999999999876321     233333332222211000 0  00001111 22232 1123445566778888888


Q ss_pred             HHHHHHHHHhccccccccccCCCCchhHHHHHhhc--------CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhc
Q 037522          258 IISTRKLELASRDREQGEAATTTPHDDLLSRFMKK--------KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQ  329 (541)
Q Consensus       258 ~i~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~--------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~  329 (541)
                      .++++++....           ....|+++.|++.        +..++++++.+++..+++||+|||+.+++|++++|+.
T Consensus       229 ~i~~r~~~~~~-----------~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~  297 (476)
T 1po5_A          229 SVEKHRATLDP-----------SNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLK  297 (476)
T ss_dssp             HHHHHHTTCCT-----------TSCCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCC-----------CCcccHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHh
Confidence            88887653211           1235788877741        1237899999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCC
Q 037522          330 NPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS  409 (541)
Q Consensus       330 ~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt  409 (541)
                      ||++|++||+||+++++.+          ..++.+++.+||||+|||+||||++|+++...+|.+.+++.++||.|||||
T Consensus       298 ~P~~~~~l~~Ei~~~~~~~----------~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt  367 (476)
T 1po5_A          298 YPHVTERVQKEIEQVIGSH----------RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNT  367 (476)
T ss_dssp             CHHHHHHHHHHHHHHTCSS----------SCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTC
T ss_pred             CHHHHHHHHHHHHHHhCCC----------CCCChHHHhcCcHHHHHHHHHHHhccCCCCCCccccCCCceecCEecCCCC
Confidence            9999999999999998653          557899999999999999999999999996555554555666999999999


Q ss_pred             EEEEehhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhceEEEe
Q 037522          410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVV  489 (541)
Q Consensus       410 ~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~  489 (541)
                      .|.++.+++||||++| +||++|+||||++.++..   ..+..|+|||+|+|.|+|++||++|++++++.||++|++++.
T Consensus       368 ~v~~~~~~~~rdp~~~-~dp~~F~PeR~l~~~~~~---~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~  443 (476)
T 1po5_A          368 EVFPVLSSALHDPRYF-ETPNTFNPGHFLDANGAL---KRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP  443 (476)
T ss_dssp             EEEECHHHHHTCTTTC-SSTTSCCGGGGBCTTSCB---CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECS
T ss_pred             EEEeehHhHhcCcccc-CCccccCchhhCCCCCCc---cCCccccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCC
Confidence            9999999999999999 999999999999765421   235579999999999999999999999999999999999987


Q ss_pred             CCcc---cce-eeeeEEecCCceeEEEeeCCC
Q 037522          490 PGHR---VEQ-KMSLTLFMKYGLMMNVHPREL  517 (541)
Q Consensus       490 ~~~~---~~~-~~~~~~~~~~~~~v~~~~r~~  517 (541)
                      ++.+   ... ..+++..| .++.|++++|+.
T Consensus       444 ~~~~~~~~~~~~~~~~~~p-~~~~v~~~~R~~  474 (476)
T 1po5_A          444 VPPEDIDLTPRESGVGNVP-PSYQIRFLARHH  474 (476)
T ss_dssp             SCGGGCCCCCCSTTSSCCC-CCCCBEEEECC-
T ss_pred             CCCCCCCccCCcCceeecC-cceEEEEEecCC
Confidence            6642   222 33555566 789999999964


No 11 
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00  E-value=2.7e-70  Score=554.61  Aligned_cols=446  Identities=18%  Similarity=0.270  Sum_probs=332.7

Q ss_pred             CCCCCCCCCCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCC
Q 037522           25 GSLSGPRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKG  104 (541)
Q Consensus        25 ~~~pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~  104 (541)
                      +.||||+++|++|+++.+.  ..+++..+.+++++||++|+   +   ++|+.+.++|  +||+.+++|+.++...|.++
T Consensus        11 ~~pPgP~~~p~iG~~~~~~--~~~~~~~~~~l~~~yG~v~~---~---~~g~~~~v~v--~~~~~~~~il~~~~~~f~~~   80 (477)
T 1r9o_A           11 KLPPGPTPLPVIGNILQIG--IKDISKSLTNLSKVYGPVFT---L---YFGLKPIVVL--HGYEAVKEALIDLGEEFSGR   80 (477)
T ss_dssp             BCCCCSSSCC-----CCBC--HHHHHHHHHHHHHHHCSEEE---E---ESSSCEEEEE--CSHHHHHHHHTTTTTTTCEE
T ss_pred             CCCCCCCCCceeccHhhcC--CCChHHHHHHHHHHhCCEEE---E---EECCCcEEEE--CCHHHHHHHHhcccHhhCCC
Confidence            3689999999999998872  24678899999999999876   3   5677788999  99999999997655677765


Q ss_pred             hhHHHHHHh-hccCcceecCChhHHHHHhhhcCCCCHH--HHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHHH
Q 037522          105 PTWQAAFHD-LLGDGIFNSDGDTWLFQRKTAALEFTTR--TLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLLR  181 (541)
Q Consensus       105 ~~~~~~~~~-~~g~~l~~~~g~~w~~~R~~~~~~~~~~--~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~  181 (541)
                      +.... +.. ..|.+++.++|+.|+++|+++.+.|++.  .++.+ .+.+.+++ +.+++.+.+.  .++++|+.+++..
T Consensus        81 ~~~~~-~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~-~~~i~~~~-~~l~~~l~~~--~~~~vd~~~~~~~  155 (477)
T 1r9o_A           81 GIFPL-AERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSI-EDRVQEEA-RCLVEELRKT--KASPCDPTFILGC  155 (477)
T ss_dssp             CCCSC-CCTTTCTTSSTTCCHHHHHHHHHHHHHHHTTSSSCSSCH-HHHHHHHH-HHHHHHHHTT--TTSCBCTHHHHHH
T ss_pred             Ccchh-hhhccCCCceEecCChHHHHHHHHHHHHHHHhCCChHHH-HHHHHHHH-HHHHHHHHhc--CCCccChHHHHHH
Confidence            43211 111 2356788889999999999888887765  22343 78888888 7777777542  3467999999999


Q ss_pred             HHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhh-hc--hHHHHHH-HHHhhhccccccccchHHHHHHHHH
Q 037522          182 MTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRF-LL--PQAIWKL-RKYLRLGLEVSMGPSLKHIDEYLSD  257 (541)
Q Consensus       182 ~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--p~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~  257 (541)
                      +++|+++.++||.+++..+     ..+......+........ ..  ....+++ .++++ ...++..++.+.+.+++.+
T Consensus       156 ~~~~vi~~~~fG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp-~~~~~~~~~~~~~~~~~~~  229 (477)
T 1r9o_A          156 APCNVICSIIFHKRFDYKD-----QQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFP-GTHNKLLKNVAFMKSYILE  229 (477)
T ss_dssp             HHHHHHHHHHHSCCCCTTC-----HHHHHHHHHHHHHHHHHTCCBC-------CCCSCCT-TCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCcCCCCC-----HHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhcc-hHHHHHHHHHHHHHHHHHH
Confidence            9999999999999876321     233333332222221100 00  0001111 11111 1113344566778888888


Q ss_pred             HHHHHHHHHhccccccccccCCCCchhHHHHHhhc--------CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhc
Q 037522          258 IISTRKLELASRDREQGEAATTTPHDDLLSRFMKK--------KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQ  329 (541)
Q Consensus       258 ~i~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~--------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~  329 (541)
                      .++++++....           ....|+++.+++.        +..++++++.+++..+++||+|||+.+++|++++|+.
T Consensus       230 ~i~~r~~~~~~-----------~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~  298 (477)
T 1r9o_A          230 KVKEHQESMDM-----------NNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLK  298 (477)
T ss_dssp             HHHHHHHTCCT-----------TCCCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhccCC-----------CCchHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHh
Confidence            88887754211           1235788877631        2348999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCC
Q 037522          330 NPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS  409 (541)
Q Consensus       330 ~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt  409 (541)
                      ||++|++|++||+++++.+          ..++.+++.+||||+|||+||||++|+++...+|.+.+++.++||.|||||
T Consensus       299 ~P~~~~kl~~Ei~~~~~~~----------~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt  368 (477)
T 1r9o_A          299 HPEVTAKVQEEIERVIGRN----------RSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGT  368 (477)
T ss_dssp             CHHHHHHHHHHHHHHTCSS----------SCCCGGGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEETTEEECTTC
T ss_pred             CHHHHHHHHHHHHHhcCCC----------CCCChHhhccCcHHHHHHHHHHHhcCCCCCCCceeccCCccccceecCCCC
Confidence            9999999999999998653          457899999999999999999999999996555555555666999999999


Q ss_pred             EEEEehhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhceEEEe
Q 037522          410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVV  489 (541)
Q Consensus       410 ~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~  489 (541)
                      .|.++.+++||||++| +||++|+||||++.++..   ..+..|+|||+|+|.|+|++||++|++++++.||++|+|++.
T Consensus       369 ~V~~~~~~~~rd~~~~-~dP~~F~PeR~l~~~~~~---~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~  444 (477)
T 1r9o_A          369 TILISLTSVLHDNKEF-PNPEMFDPHHFLDEGGNF---KKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSL  444 (477)
T ss_dssp             EEEECSHHHHTCTTTS-SSTTSCCGGGGBCTTSCB---CCCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEES
T ss_pred             EEEEecHHhhCCcccC-CCccccCccceECCCCCc---CccccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecC
Confidence            9999999999999999 999999999999765421   235579999999999999999999999999999999999987


Q ss_pred             CCcc---cce-eeeeEEecCCceeEEEeeCCC
Q 037522          490 PGHR---VEQ-KMSLTLFMKYGLMMNVHPREL  517 (541)
Q Consensus       490 ~~~~---~~~-~~~~~~~~~~~~~v~~~~r~~  517 (541)
                      ++.+   ... ..+++..| .++.+++++|+.
T Consensus       445 ~~~~~~~~~~~~~~~~~~p-~~~~~~~~~R~~  475 (477)
T 1r9o_A          445 VDPKNLDTTPVVNGFASVP-PFYQLCFIPIHH  475 (477)
T ss_dssp             SCGGGCCCCCBCCSSSCBC-CCCCEEEEECCC
T ss_pred             CCCCCCCccCCcCceeecC-CCeEEEEEEecc
Confidence            6642   222 33455565 689999999964


No 12 
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00  E-value=1.2e-69  Score=549.76  Aligned_cols=450  Identities=20%  Similarity=0.336  Sum_probs=337.4

Q ss_pred             cCCCCCCCCCCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCC
Q 037522           24 SGSLSGPRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPK  103 (541)
Q Consensus        24 ~~~~pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~  103 (541)
                      .+.||||+++|++|+++.+......++..+.+++++||++|+   +   ++|+.+.++|  +||+.+++++.+++..|++
T Consensus        11 ~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~---~---~~g~~~~v~v--~~~~~~~~vl~~~~~~f~~   82 (481)
T 3czh_A           11 MGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFS---L---DLGGISTVVL--NGYDVVKECLVHQSEIFAD   82 (481)
T ss_dssp             -CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEE---E---EETTEEEEEE--ESHHHHHHHHTTTTTTTCB
T ss_pred             CCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEE---E---EECCccEEEE--CCHHHHHHHHhhchHhhCC
Confidence            456899999999999998854311278889999999999866   3   5677788888  9999999999887567877


Q ss_pred             ChhHHHHHHhhc-cCc-ceecCChhHHHHHhhhcCCCCHHHH--HHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHH
Q 037522          104 GPTWQAAFHDLL-GDG-IFNSDGDTWLFQRKTAALEFTTRTL--RQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLL  179 (541)
Q Consensus       104 ~~~~~~~~~~~~-g~~-l~~~~g~~w~~~R~~~~~~~~~~~l--~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~  179 (541)
                      ++.... +..+. +.+ ++..+|+.|+++|+++.+.|+...+  .. +.+.+.+++ +.+++.+.+.  .++++|+.+.+
T Consensus        83 ~~~~~~-~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~~~~~-~~~~i~~~~-~~l~~~l~~~--~~~~~d~~~~~  157 (481)
T 3czh_A           83 RPCLPL-FMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKS-FESKILEET-KFFNDAIETY--KGRPFDFKQLI  157 (481)
T ss_dssp             CCCCHH-HHHHHTTCSSTTCCSSHHHHHHHHHHHHHHHHTTTTSTT-HHHHHHHHH-HHHHHHHHTT--TTCCBCCHHHH
T ss_pred             CCCcHH-HHhhcCCCCeEeCCCChHHHHHHHHHHHHHHHhcCChHH-HHHHHHHHH-HHHHHHHHHc--CCCCcCHHHHH
Confidence            654321 22222 335 4457899999999999998865433  34 378888888 7787777542  34579999999


Q ss_pred             HHHHHHHHHhhhccCCCCccCCCCCcchHHHH---HHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHH
Q 037522          180 LRMTFDNICGLAFGKDPQTLSQGLPENSFAVA---FDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLS  256 (541)
Q Consensus       180 ~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  256 (541)
                      ..+++++++.++||.+++..+     ..+...   +.................+++..+++....++..++.+.+.+++.
T Consensus       158 ~~~~~~vi~~~~fG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~  232 (481)
T 3czh_A          158 TNAVSNITNLIIFGERFTYED-----TDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLS  232 (481)
T ss_dssp             HHHHHHHHHHHHHSSCCCTTC-----HHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSSSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCCCC-----HHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence            999999999999999876321     223222   222222111000000001111122221122344556677788888


Q ss_pred             HHHHHHHHHHhccccccccccCCCCchhHHHHHhhc--------CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHh
Q 037522          257 DIISTRKLELASRDREQGEAATTTPHDDLLSRFMKK--------KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVS  328 (541)
Q Consensus       257 ~~i~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~--------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~  328 (541)
                      +.++++++....           ....|+++.|++.        +..++++++.+++..+++||+|||+.+++|++++|+
T Consensus       233 ~~i~~r~~~~~~-----------~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~  301 (481)
T 3czh_A          233 RLIEKASVNRKP-----------QLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMA  301 (481)
T ss_dssp             HHHHHHHTTCCT-----------TCCSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCC-----------CchHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHh
Confidence            888877653211           1345788888752        235899999999999999999999999999999999


Q ss_pred             cChHHHHHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCC
Q 037522          329 QNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAG  408 (541)
Q Consensus       329 ~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~G  408 (541)
                      .||++|++|++|++++++.+          +.++.+++.+||||+|||+|+||++|+++...+|.+.+++.++||.||||
T Consensus       302 ~~P~~~~kl~~Ei~~~~~~~----------~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~G  371 (481)
T 3czh_A          302 LYPNIQGQVQKEIDLIMGPN----------GKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKG  371 (481)
T ss_dssp             HCHHHHHHHHHHHHHHTCSS----------SCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTT
T ss_pred             hChHHHHHHHHHHHHhcCCC----------CCCChhhhhhChHHHHHHHHHHhhccccccCcceeecCCeEEeCEEcCCC
Confidence            99999999999999998653          56789999999999999999999999999665555555566699999999


Q ss_pred             CEEEEehhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhceEEE
Q 037522          409 STVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTV  488 (541)
Q Consensus       409 t~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~  488 (541)
                      |.|.++.+++||||++| +||++||||||+++++.   ...+..|+|||+|+|.|+|++||++|++++++.||++|++++
T Consensus       372 t~V~~~~~~~~rdp~~~-~dP~~F~PeR~l~~~~~---~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~  447 (481)
T 3czh_A          372 TTVITNLYSVHFDEKYW-RDPEVFHPERFLDSSGY---FAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHF  447 (481)
T ss_dssp             CEEEEEHHHHHTCTTTC-SSTTSCCGGGGBCTTSC---BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEC
T ss_pred             CEEEechHHHhCCcccC-CCccccCCCceeCCCCC---CcCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeC
Confidence            99999999999999999 99999999999975531   134567999999999999999999999999999999999998


Q ss_pred             eCCcccc--eeeeeEEecCCceeEEEeeCCC
Q 037522          489 VPGHRVE--QKMSLTLFMKYGLMMNVHPREL  517 (541)
Q Consensus       489 ~~~~~~~--~~~~~~~~~~~~~~v~~~~r~~  517 (541)
                      .++....  ...+++.. +.++.++++||-+
T Consensus       448 ~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~  477 (481)
T 3czh_A          448 PHELVPDLKPRLGMTLQ-PQPYLICAERRHH  477 (481)
T ss_dssp             GGGCCCCCCCCSSSSCC-CCCCCBEEEECC-
T ss_pred             CCCCCCCcccCCCceec-CCceEEEEEeccc
Confidence            6544222  22234444 4578999999864


No 13 
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00  E-value=6.7e-70  Score=554.51  Aligned_cols=449  Identities=20%  Similarity=0.294  Sum_probs=336.4

Q ss_pred             CCCCCCCCCCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCC
Q 037522           25 GSLSGPRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKG  104 (541)
Q Consensus        25 ~~~pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~  104 (541)
                      +.||||+++|++||++++... +..+..+.++++|||++|+   +   ++|+.+.++|  +||+++++++.+++..|.++
T Consensus         8 ~~PPgP~~lPliGnl~~l~~~-~~~~~~~~~~~~kYG~i~~---~---~~g~~~~vvv--~~p~~~k~il~~~~~~f~~r   78 (494)
T 3swz_A            8 KYPKSLLSLPLVGSLPFLPRH-GHMHNNFFKLQKKYGPIYS---V---RMGTKTTVIV--GHHQLAKEVLIKKGKDFSGR   78 (494)
T ss_dssp             ----CCBCCCEEEEESSCTTS-SCHHHHHHHTHHHHCSEEE---E---EETTEEEEEE--CSHHHHHHHHTTTTTTTBBC
T ss_pred             CCCCCCCCCCeEcchHHhCCC-CchhHHHHHHHHHcCCEEE---E---EeCCCCEEEE--CCHHHHHHHHHhCcHhhCCC
Confidence            468999999999999987542 3477888999999999876   3   6789999999  99999999999887889888


Q ss_pred             hhHHHHHHhhc--cCcceec-CChhHHHHHhhhcCCCCH--HHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHH
Q 037522          105 PTWQAAFHDLL--GDGIFNS-DGDTWLFQRKTAALEFTT--RTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLL  179 (541)
Q Consensus       105 ~~~~~~~~~~~--g~~l~~~-~g~~w~~~R~~~~~~~~~--~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~  179 (541)
                      +..... ..+.  +.+++.+ +|+.|+++|+++.+.|+.  .....+ .+.+.+++ +.+++.+.+.  .+.++|+...+
T Consensus        79 p~~~~~-~~~~~~~~gl~~~~~g~~wr~~Rr~~~~~f~~~~~~~~~~-~~~i~~~~-~~l~~~l~~~--~~~~vd~~~~~  153 (494)
T 3swz_A           79 PQMATL-DIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKL-EKIICQEI-STLCDMLATH--NGQSIDISFPV  153 (494)
T ss_dssp             CCCHHH-HHHTTTTCSSSSSCSSHHHHHHHHHHHHHTTTTSSSTTCH-HHHHHHHH-HHHHHHHHHT--TTEEECCHHHH
T ss_pred             CCcHHH-HHhccCCCCeEeCCCCHHHHHHHHHHHHHHHHhcchHHHH-HHHHHHHH-HHHHHHHHHc--CCCcccHHHHH
Confidence            765422 2121  3566555 599999999999998863  334454 78888888 7788887652  46789999999


Q ss_pred             HHHHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhh--chHHHHHHHHHhhhccccccccchHHHHHHHHH
Q 037522          180 LRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFL--LPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSD  257 (541)
Q Consensus       180 ~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  257 (541)
                      ..+++|+++.++||.++...+      .....+......+.....  ....+.+++++++....++..+..+.+.+++..
T Consensus       154 ~~~t~dvi~~~~fG~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~~~~~~~~~~~~~~~~~~~~  227 (494)
T 3swz_A          154 FVAVTNVISLICFNTSYKNGD------PELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLLNK  227 (494)
T ss_dssp             HHHHHHHHHHHHHSCCCCTTC------THHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCCSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCcCCCCC------HHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999875421      112222222221111100  000011122233322223333444555555555


Q ss_pred             HHHHHHHHHhccccccccccCCCCchhHHHHHhhc--------------CCCCCHHHHHHHHHHHHHhccccHHHHHHHH
Q 037522          258 IISTRKLELASRDREQGEAATTTPHDDLLSRFMKK--------------KESYSDEFLQHVALNFILAGRDTSSVAMSWF  323 (541)
Q Consensus       258 ~i~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~--------------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~  323 (541)
                      .++++++....           ....|+++.|++.              .+.++++++.+++..+++||+|||+++++|+
T Consensus       228 ~i~~~~~~~~~-----------~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~  296 (494)
T 3swz_A          228 ILENYKEKFRS-----------DSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWT  296 (494)
T ss_dssp             HHHHHTTTCCT-----------TCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhcc-----------cchhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHH
Confidence            55554432111           2345788888752              1238899999999999999999999999999


Q ss_pred             HHHHhcChHHHHHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCc
Q 037522          324 FWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGT  403 (541)
Q Consensus       324 l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~  403 (541)
                      +++|+.||++|+|+++||+++++.+          ..++.+++.+||||+|||+|+||++|++|...+|.+.++..++||
T Consensus       297 l~~L~~~P~~q~kl~~Ei~~v~~~~----------~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~  366 (494)
T 3swz_A          297 LAFLLHNPQVKKKLYEEIDQNVGFS----------RTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEF  366 (494)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHTCSS----------SCCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTE
T ss_pred             HHHHHhCHHHHHHHHHHHHHhcCCC----------CCCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceECCE
Confidence            9999999999999999999998764          568999999999999999999999999998776666666666999


Q ss_pred             ccCCCCEEEEehhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhh
Q 037522          404 FVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLR  483 (541)
Q Consensus       404 ~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~  483 (541)
                      .|||||.|+++.+++||||++| +||++|+||||+++++... ......|+|||+|+|.|+|++||..|++++++.||++
T Consensus       367 ~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeRfl~~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~  444 (494)
T 3swz_A          367 AVDKGTEVIINLWALHHNEKEW-HQPDQFMPERFLNPAGTQL-ISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQR  444 (494)
T ss_dssp             EECTTCEEEECHHHHHHCTTTS-SSTTSCCGGGGBCTTSSSB-CCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHH
T ss_pred             EeCCCCEEEEehHHhhCCcccC-CCcccCCcccccCCCCccc-cCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999 9999999999998764221 1234679999999999999999999999999999999


Q ss_pred             ceEEEeCCcc---cceeeeeEEecCCceeEEEeeCCC
Q 037522          484 YHLTVVPGHR---VEQKMSLTLFMKYGLMMNVHPREL  517 (541)
Q Consensus       484 f~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~r~~  517 (541)
                      |+|+++++..   .....+.+.. +.++.|++++|+.
T Consensus       445 f~~~~~~~~~~~~~~~~~~~~~~-p~~~~v~~~~R~~  480 (494)
T 3swz_A          445 FDLEVPDDGQLPSLEGIPKVVFL-IDSFKVKIKVRQA  480 (494)
T ss_dssp             EEEECCSSCCCCCCSCEESSSEE-CCCCCEEEEECHH
T ss_pred             cEEeeCCCCCCCCCCCccceeec-CCCcEEEEEEcCc
Confidence            9999876532   2233334445 4789999999963


No 14 
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00  E-value=2.3e-69  Score=541.98  Aligned_cols=431  Identities=22%  Similarity=0.298  Sum_probs=339.6

Q ss_pred             HhcCCCCCCCCCCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCC
Q 037522           22 FMSGSLSGPRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNY  101 (541)
Q Consensus        22 ~~~~~~pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~  101 (541)
                      ...+.||||+++|++||++.+..+   .+ ++.+++++||++|+   +   .+++.+.+++  +||+.+++++.+++..|
T Consensus         9 ~~~~~pPgp~~~P~iG~~~~~~~~---~~-~~~~~~~~yg~v~~---~---~~~g~~~vvv--~~~~~~~~il~~~~~~~   76 (444)
T 2ve3_A            9 NSLPIPPGDFGLPWLGETLNFLND---GD-FGKKRQQQFGPIFK---T---RLFGKNVIFI--SGALANRFLFTKEQETF   76 (444)
T ss_dssp             CCCCCCCCCCCBTTTBTHHHHHHC---TT-HHHHHHHHHCSSEE---E---EETTEEEEEE--CSHHHHHHHTSSCTTTE
T ss_pred             CCCCCCCCCCCCCccccHHHHhcC---cH-HHHHHHHHcCCeEE---E---eeCCCCEEEE--cCHHHHHHHHhCCCccc
Confidence            344579999999999999988653   45 77789999999876   3   4456778888  99999999998874456


Q ss_pred             CCChhHHHHHHhhccC-cceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHH
Q 037522          102 PKGPTWQAAFHDLLGD-GIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLL  180 (541)
Q Consensus       102 ~~~~~~~~~~~~~~g~-~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~  180 (541)
                      ...  +...+..++|. +++..+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+    ++++|+.+++.
T Consensus        77 ~~~--~~~~~~~~~g~~~l~~~~g~~~~~~R~~~~~~f~~~~l~~~-~~~i~~~~-~~l~~~l~~----~~~vd~~~~~~  148 (444)
T 2ve3_A           77 QAT--WPLSTRILLGPNALATQMGEIHRSRRKILYQAFLPRTLDSY-LPKMDGIV-QGYLEQWGK----ANEVIWYPQLR  148 (444)
T ss_dssp             EEE--CCHHHHHHHCTTSGGGCCHHHHHHHHHHHHGGGCHHHHHTT-HHHHHHHH-HHHHHHHHH----SSEEEHHHHHH
T ss_pred             ccc--hhHHHHHHhCccccccCCchHHHHHHHHHHhhcCHHHHHHH-HHHHHHHH-HHHHHHhcC----CCcEeHHHHHH
Confidence            522  11223344565 78888999999999999999999999987 89999999 777777742    46899999999


Q ss_pred             HHHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHH
Q 037522          181 RMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIIS  260 (541)
Q Consensus       181 ~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  260 (541)
                      .++++++++++|| +....+     ..+.+.+........   .++.       .++....++..++.+.+.+++.+.++
T Consensus       149 ~~~~~vi~~~~fG-~~~~~~-----~~~~~~~~~~~~~~~---~~~~-------~~p~~~~~~~~~~~~~~~~~~~~~i~  212 (444)
T 2ve3_A          149 RMTFDVAATLFMG-EKVSQN-----PQLFPWFETYIQGLF---SLPI-------PLPNTLFGKSQRARALLLAELEKIIK  212 (444)
T ss_dssp             HHHHHHHHHHHTC-HHHHSC-----TTHHHHHHHHHHHHS---SCCC-------CSTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcC-CCcccH-----HHHHHHHHHHHHHHh---cCCc-------cCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999 332111     233333333322111   1110       01111112334456778888888888


Q ss_pred             HHHHHHhccccccccccCCCCchhHHHHHhhc----CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHH
Q 037522          261 TRKLELASRDREQGEAATTTPHDDLLSRFMKK----KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDK  336 (541)
Q Consensus       261 ~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~----~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~  336 (541)
                      ++++.   +          ....|+++.|++.    +..++++++.++++.+++||+|||+.+++|++++|+.||++|++
T Consensus       213 ~r~~~---~----------~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~  279 (444)
T 2ve3_A          213 ARQQQ---P----------PSEEDALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRER  279 (444)
T ss_dssp             HHHTS---C----------CCCSSHHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred             HHhcC---C----------CCccCHHHHHHhccccCCCCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHH
Confidence            77643   1          2456899999863    23489999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehh
Q 037522          337 IATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIY  416 (541)
Q Consensus       337 lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~  416 (541)
                      ||+|+++++++           ..++.+++.+||||+|||+|+||++|+++...|.+.+ ++.++||.|||||.|.++.+
T Consensus       280 l~~Ei~~~~~~-----------~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~-d~~l~G~~Ip~Gt~V~~~~~  347 (444)
T 2ve3_A          280 VRQEQNKLQLS-----------QELTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQ-DCQFQGFHFPKGWLVSYQIS  347 (444)
T ss_dssp             HHHHHHSSCCS-----------SCCCHHHHTTCHHHHHHHHHHHHHSCSSCEEEEEESS-CEEETTEEECTTCEEEEEHH
T ss_pred             HHHHHHHhccC-----------CCCChhhhhcChHHHHHHHHHHhcCCCccCccceeCC-CeeECCEEECCCCEEEechH
Confidence            99999998753           3578999999999999999999999999976655555 45559999999999999999


Q ss_pred             hhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhceEEEeCCcccce
Q 037522          417 AIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVVPGHRVEQ  496 (541)
Q Consensus       417 ~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~  496 (541)
                      ++||||++| +||++||||||++.+..  ....+..|+|||+|+|.|+|++||+.|++++++.|+++|++++.++.+...
T Consensus       348 ~~~rdp~~~-~dP~~F~PeR~l~~~~~--~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~  424 (444)
T 2ve3_A          348 QTHADPDLY-PDPEKFDPERFTPDGSA--THNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLEL  424 (444)
T ss_dssp             HHTTCTTTS-SSTTSCCGGGSSTTSTT--TTSCTTSCCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEEECSSCCCCE
T ss_pred             HhcCChhhc-CCcCccCccccCCCCcc--cCCCCceeeCCCCCCccCccHHHHHHHHHHHHHHHHHhCEEEeCCCCCcce
Confidence            999999999 99999999999975421  112456699999999999999999999999999999999999887665555


Q ss_pred             eeeeEEecCCceeEEEeeCC
Q 037522          497 KMSLTLFMKYGLMMNVHPRE  516 (541)
Q Consensus       497 ~~~~~~~~~~~~~v~~~~r~  516 (541)
                      ....+..|..+++|++++|+
T Consensus       425 ~~~~~~~~~~~l~v~~~~r~  444 (444)
T 2ve3_A          425 VVTPSPRPKDNLRVKLHSLM  444 (444)
T ss_dssp             EESSSEEETTCCEEEEEEC-
T ss_pred             eccccccCCCCceEEEEeCC
Confidence            55667788899999999984


No 15 
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00  E-value=1.2e-70  Score=559.51  Aligned_cols=447  Identities=21%  Similarity=0.283  Sum_probs=336.1

Q ss_pred             CCCCCCCCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChh
Q 037522           27 LSGPRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPT  106 (541)
Q Consensus        27 ~pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~  106 (541)
                      +|||+++|++|+++.+..   +++..+.++++|||++|+   +   ++|+.+.+++  +||+.+++++.+++..|.+++.
T Consensus        18 ~PgP~~~p~~G~~~~~~~---~~~~~~~~l~~~yG~v~~---~---~~g~~~~vvv--~~~~~i~~il~~~~~~f~~r~~   86 (495)
T 2hi4_A           18 PPEPWGWPLLGHVLTLGK---NPHLALSRMSQRYGDVLQ---I---RIGSTPVLVL--SRLDTIRQALVRQGDDFKGRPD   86 (495)
T ss_dssp             CCCCCCBTTTBTHHHHTT---CHHHHHHHHHHHHCSEEE---E---EETTEEEEEE--CSHHHHHHHHTTTGGGSCBCCC
T ss_pred             CCCCCCCcceeeHHhcCc---cHHHHHHHHHHHhCCEEE---E---EECCccEEEE--CCHHHHHHHHHhcchhhCCCCC
Confidence            399999999999988753   478889999999999866   3   5677888999  9999999999876567876654


Q ss_pred             HHHHHHhh-ccCcceec--CChhHHHHHhhhcCCCCH---HHH---H---HHHHHHHHHHHHhhhhhHHHHhhhcCccee
Q 037522          107 WQAAFHDL-LGDGIFNS--DGDTWLFQRKTAALEFTT---RTL---R---QAMARWVSRAIKHRFCPILEVAQLEAKPVD  174 (541)
Q Consensus       107 ~~~~~~~~-~g~~l~~~--~g~~w~~~R~~~~~~~~~---~~l---~---~~~~~~i~~~~~~~l~~~l~~~~~~~~~vd  174 (541)
                      ... +..+ .+.+++.+  +|+.|+++|+++++.|+.   ...   .   . +.+.+.+++ +.+++.+.+...+++++|
T Consensus        87 ~~~-~~~~~~~~~l~~~~~~g~~w~~~Rr~~~~~f~~~s~~~~~~~~~~~~-~~~~i~~~~-~~l~~~l~~~~~~~~~~d  163 (495)
T 2hi4_A           87 LYT-STLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCY-LEEHVSKEA-KALISRLQELMAGPGHFD  163 (495)
T ss_dssp             CHH-HHTSTTSCCTTTSSCCSHHHHHHHHHHHHHHHHTTTSBCSSCSSCBH-HHHHHHHHH-HHHHHHHHHHHHTTSCBC
T ss_pred             cHH-HHHhcCCCCEEEcCCCChHHHHHHHHHHHHHHHhccCcccccchhhh-HHHHHHHHH-HHHHHHHHHhccCCCccc
Confidence            432 2222 24677666  699999999999987532   211   1   3 378888888 888888866444567899


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhh-hchHHHHHHHHHhhhccccccccchHHHHH
Q 037522          175 FQDLLLRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRF-LLPQAIWKLRKYLRLGLEVSMGPSLKHIDE  253 (541)
Q Consensus       175 l~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~  253 (541)
                      +.+++..+++|+++.++||.+++..+     .++............... .....+.++.++++....++..++.+.+.+
T Consensus       164 ~~~~~~~~~~dvi~~~~fG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~  238 (495)
T 2hi4_A          164 PYNQVVVSVANVIGAMCFGQHFPESS-----DEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLW  238 (495)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGSCTTC-----HHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCCHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHcCCCCCCCC-----HHHHHHHHHHHHHHHhcccchHHHHhHHHHhcCchHHHHHHHHHHHHHH
Confidence            99999999999999999999875321     222222211111111000 000001112222221223344566778888


Q ss_pred             HHHHHHHHHHHHHhccccccccccCCCCchhHHHHHhhc--------CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHH
Q 037522          254 YLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKK--------KESYSDEFLQHVALNFILAGRDTSSVAMSWFFW  325 (541)
Q Consensus       254 ~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~--------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~  325 (541)
                      ++.+.++++++....           ....|+++.+++.        +..++++++.+++..+++||+|||+.+++|+++
T Consensus       239 ~~~~~i~~r~~~~~~-----------~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~  307 (495)
T 2hi4_A          239 FLQKTVQEHYQDFDK-----------NSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLM  307 (495)
T ss_dssp             HHHHHHHHHHHTCCT-----------TCCCSHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcc-----------cccccHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence            888888888764211           1235788888741        124899999999999999999999999999999


Q ss_pred             HHhcChHHHHHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCccc
Q 037522          326 LVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFV  405 (541)
Q Consensus       326 ~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~I  405 (541)
                      +|+.||++|++|++||+++++.+          ..++.+++.+||||+|||+||||++|++|...+|.+.+++.++||.|
T Consensus       308 ~L~~~P~~~~kl~~Ei~~v~~~~----------~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l~G~~I  377 (495)
T 2hi4_A          308 YLVTKPEIQRKIQKELDTVIGRE----------RRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYI  377 (495)
T ss_dssp             HHHHCHHHHHHHHHHHHHHTTTS----------SCCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEE
T ss_pred             HHhhCHHHHHHHHHHHHHhcCCC----------CCCChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeEeCeEE
Confidence            99999999999999999998753          55789999999999999999999999999755555555566699999


Q ss_pred             CCCCEEEEehhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhce
Q 037522          406 PAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYH  485 (541)
Q Consensus       406 p~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~  485 (541)
                      ||||.|.++.+++||||++| +||++|+||||+++++.......+..|+|||+|+|.|+|++||++|++++++.|+++|+
T Consensus       378 p~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~  456 (495)
T 2hi4_A          378 PKKCCVFVNQWQVNHDPELW-EDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLE  456 (495)
T ss_dssp             CTTCEEEEBHHHHHHCTTTC-SSTTSCCGGGGBCTTSSSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCE
T ss_pred             CCCCEEEeChHHhhCCcccC-CCcCccCcccccCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCE
Confidence            99999999999999999999 99999999999976542111113457999999999999999999999999999999999


Q ss_pred             EEEeCCccc--ceeeeeEEecCCce-eEEEeeCC
Q 037522          486 LTVVPGHRV--EQKMSLTLFMKYGL-MMNVHPRE  516 (541)
Q Consensus       486 ~~~~~~~~~--~~~~~~~~~~~~~~-~v~~~~r~  516 (541)
                      |++.++...  ....+++..|. ++ .|+++ |.
T Consensus       457 ~~~~~~~~~~~~~~~~~~~~p~-~~~~v~~~-R~  488 (495)
T 2hi4_A          457 FSVPPGVKVDLTPIYGLTMKHA-RCEHVQAR-RF  488 (495)
T ss_dssp             EECCTTCCCCCCCBCSSSCBCC-CCCCBEEE-CC
T ss_pred             EeCCCCCCCCccccCCceecCC-CcceEEEE-Ec
Confidence            998765432  23334555554 56 89998 84


No 16 
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00  E-value=1.6e-68  Score=539.50  Aligned_cols=442  Identities=21%  Similarity=0.342  Sum_probs=343.0

Q ss_pred             CCCCCCCCCCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCC
Q 037522           25 GSLSGPRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKG  104 (541)
Q Consensus        25 ~~~pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~  104 (541)
                      +.+|||+++|++||++++..  .+.+..+.+++++||++|+   +   ++++.+.++|  +||+.+++++.+  ..|.+.
T Consensus         3 ~~~PGP~~~p~iG~l~~~~~--~~~~~~~~~~~~~yG~v~~---~---~~~~~~~v~v--~~~~~~~~il~~--~~f~~~   70 (470)
T 2ij2_A            3 KEMPQPKTFGELKNLPLLNT--DKPVQALMKIADELGEIFK---F---EAPGRVTRYL--SSQRLIKEACDE--SRFDKN   70 (470)
T ss_dssp             CCCCCCCCCGGGTTGGGGCS--SCHHHHHHHHHHHHCSEEE---E---EETTEEEEEE--CCHHHHHHHTCT--TTEEEC
T ss_pred             CCCCCCCCCCccccHHHHhc--ccchHHHHHHHHHhCCeEE---E---ecCCccEEEE--CCHHHHHHHHhh--cCcCcC
Confidence            57899999999999998843  3567788899999999877   3   5567889999  999999999965  345443


Q ss_pred             hhH-HHHHHhhccCcceec--CChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHHH
Q 037522          105 PTW-QAAFHDLLGDGIFNS--DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLLR  181 (541)
Q Consensus       105 ~~~-~~~~~~~~g~~l~~~--~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~  181 (541)
                      ... ...+....+.+++..  +|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+... ..++++|+.+++..
T Consensus        71 ~~~~~~~~~~~~~~~l~~~~~~g~~w~~~Rr~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~~-~~~~~vd~~~~~~~  147 (470)
T 2ij2_A           71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGY-HAMMVDIA-VQLVQKWERL-NADEHIEVPEDMTR  147 (470)
T ss_dssp             CCHHHHHHHHHHTTSGGGSCTTSHHHHHHHHHHGGGGSTTTHHHH-HHHHHHHH-HHHHHHHHTC-CTTCCEEHHHHHHH
T ss_pred             chhHHHHHHHhcCCceEEcCCCchHHHHHHHHhccccCHHHHHHH-HHHHHHHH-HHHHHHHHhh-CCCCeEEHHHHHHH
Confidence            221 111223346778776  899999999999999999999886 89999999 7787777542 23467999999999


Q ss_pred             HHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHH
Q 037522          182 MTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIIST  261 (541)
Q Consensus       182 ~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  261 (541)
                      +++|+++.++||.+++..+.+. ...+.+.+.............+.    +..+++....++..++.+.+.+++.+.+++
T Consensus       148 ~~~~vi~~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  222 (470)
T 2ij2_A          148 LTLDTIGLCGFNYRFNSFYRDQ-PHPFITSMVRALDEAMNKLQRAN----PDDPAYDENKRQFQEDIKVMNDLVDKIIAD  222 (470)
T ss_dssp             HHHHHHHHHHHSCCCCGGGCSS-CCHHHHHHHHHHHHHHHTC---C----TTSGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCcccccccCC-CCHHHHHHHHHHHHHHHHHhhhh----hHhhccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999987542211 24555555444333222111111    011111111233445667788888888888


Q ss_pred             HHHHHhccccccccccCCCCchhHHHHHhhc-----CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHH
Q 037522          262 RKLELASRDREQGEAATTTPHDDLLSRFMKK-----KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDK  336 (541)
Q Consensus       262 r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~-----~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~  336 (541)
                      +++..             ....|+++.|++.     +..++++++.+++..+++||+|||+.+++|++++|+.||++|++
T Consensus       223 r~~~~-------------~~~~dll~~ll~~~~~~~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~k  289 (470)
T 2ij2_A          223 RKASG-------------EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQK  289 (470)
T ss_dssp             HHHHC-------------CCCSSHHHHHHHCCCTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred             HHhcc-------------cCchhHHHHHHhccCcccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHH
Confidence            76541             2346899999863     23589999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCC-cccCCCCEEEEeh
Q 037522          337 IATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTG-TFVPAGSTVTYSI  415 (541)
Q Consensus       337 lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g-~~Ip~Gt~v~~~~  415 (541)
                      ||+|++++++.           +.++++++.+||||+|||+|+||++|+++...|++.+| +.++| |.|||||.|.++.
T Consensus       290 l~~Ei~~~~~~-----------~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~r~~~~d-~~~~g~~~Ip~Gt~V~~~~  357 (470)
T 2ij2_A          290 AAEEAARVLVD-----------PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED-TVLGGEYPLEKGDELMVLI  357 (470)
T ss_dssp             HHHHHHHHCCS-----------SSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSC-EEETTTEEECTTCEEEEEH
T ss_pred             HHHHHHHHcCC-----------CCCCHHHHhCCHHHHHHHHHHHhcCCCccccceeccCC-cccCCceEeCCCCEEEech
Confidence            99999999864           34899999999999999999999999999866666655 44588 9999999999999


Q ss_pred             hhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhceEEEeCCcccc
Q 037522          416 YAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVVPGHRVE  495 (541)
Q Consensus       416 ~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~  495 (541)
                      +++||||++||+||++|+|||| +. .   ....+..|+|||+|+|.|+|++||++|++++++.||++|+|+..++.++.
T Consensus       358 ~~~~rdp~~~g~dP~~F~PeR~-~~-~---~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~  432 (470)
T 2ij2_A          358 PQLHRDKTIWGDDVEEFRPERF-EN-P---SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD  432 (470)
T ss_dssp             HHHTTCHHHHCSCTTSCCGGGG-SS-G---GGSCTTSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCCCCC
T ss_pred             HHhcCCHhhhCCCccccCcccc-CC-C---CcCCCccccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEeeCCCCccc
Confidence            9999999999899999999999 21 1   12234678999999999999999999999999999999999932233444


Q ss_pred             eeeeeEEecCCceeEEEeeCCC
Q 037522          496 QKMSLTLFMKYGLMMNVHPREL  517 (541)
Q Consensus       496 ~~~~~~~~~~~~~~v~~~~r~~  517 (541)
                      ....++..|. ++.|++++|+.
T Consensus       433 ~~~~~~~~p~-~~~v~~~~R~~  453 (470)
T 2ij2_A          433 IKETLTLKPE-GFVVKAKSKKI  453 (470)
T ss_dssp             EEESSSEEET-TCEEEEEECCC
T ss_pred             cccceEecCC-CeEEEEEEccC
Confidence            4445667777 99999999975


No 17 
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00  E-value=1.3e-67  Score=532.30  Aligned_cols=426  Identities=25%  Similarity=0.410  Sum_probs=343.3

Q ss_pred             hhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChhHHHHHHh-----hccCccee-
Q 037522           48 RLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAFHD-----LLGDGIFN-  121 (541)
Q Consensus        48 ~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~~~~~~~-----~~g~~l~~-  121 (541)
                      .++..+.++++|||++|+   +   ++|+.+.|+|  +||+.+++++.+  ..|.+++........     ++|.+++. 
T Consensus        11 ~~~~~~~~~~~kyG~v~~---~---~~~~~~~vvv--~~p~~~~~il~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   80 (456)
T 3mdm_A           11 VLQDVFLDWAKKYGPVVR---V---NVFHKTSVIV--TSPESVKKFLMS--TKYNKDSKMYRALQTVFGERLFGQGLVSE   80 (456)
T ss_dssp             CHHHHHHHHHHHHCSEEE---E---EETTEEEEEE--CCHHHHHHHHTC--TTSCCCHHHHHHHHEETTEESSTTSTTTC
T ss_pred             hHHHHHHHHHHHhCCeEE---E---EeCCCCEEEE--CCHHHHHHHHhh--ccccccchhHHHHHHhhcccccCCCcccC
Confidence            477888999999999877   3   6678899999  999999999975  467777654433322     23566655 


Q ss_pred             cCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHHHHHHHHHHhhhccCCCCccCC
Q 037522          122 SDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLLRMTFDNICGLAFGKDPQTLSQ  201 (541)
Q Consensus       122 ~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~  201 (541)
                      .+|+.|+++|+++++.|+.+.++.+ .+.+.+++ +.+++.+.+...++.++|+.+++..+++|+++.++||.+++....
T Consensus        81 ~~g~~w~~~Rr~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~  158 (456)
T 3mdm_A           81 CNYERWHKQRRVIDLAFSRSSLVSL-METFNEKA-EQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLG  158 (456)
T ss_dssp             CCHHHHHHHHHHHGGGGSHHHHHTT-HHHHHHHH-HHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGT
T ss_pred             CChHHHHHHHhhcccccCHHHHHHH-HHHHHHHH-HHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcc
Confidence            4899999999999999999999986 89999999 888898877665667899999999999999999999999876543


Q ss_pred             CCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhh--ccccccccchHHHHHHHHHHHHHHHHHHhccccccccccCC
Q 037522          202 GLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRL--GLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATT  279 (541)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~~  279 (541)
                      ..  ..+...+..+........ .+     +..++|.  ...+...++.+.+.+++.++++++++....+.         
T Consensus       159 ~~--~~~~~~~~~~~~~~~~~~-~~-----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~---------  221 (456)
T 3mdm_A          159 AQ--KPLSQAVKLMLEGITASR-NT-----LAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGE---------  221 (456)
T ss_dssp             CC--HHHHHHHHHHHHHHHHHH-HS-----CGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---------
T ss_pred             cc--cHHHHHHHHHHHHHHHHH-HH-----HHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---------
Confidence            22  445555444443322210 00     1111110  01123344556777788888888877655432         


Q ss_pred             CCchhHHHHHhhcC-CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCccccc
Q 037522          280 TPHDDLLSRFMKKK-ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVE  358 (541)
Q Consensus       280 ~~~~~~l~~ll~~~-~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~  358 (541)
                      ....|+++.+++.. +.++++++.+++..+++||+|||+.+++|++++|+.||++|++|++|++++++..          
T Consensus       222 ~~~~d~l~~ll~~~~~~~~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~----------  291 (456)
T 3mdm_A          222 EVPADILTQILKAEEGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSK----------  291 (456)
T ss_dssp             CCCCCHHHHHHHHTSSCSSSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTC----------
T ss_pred             cchhhHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCC----------
Confidence            23568999998643 3489999999999999999999999999999999999999999999999998764          


Q ss_pred             CCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccCCCCC
Q 037522          359 EPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWL  438 (541)
Q Consensus       359 ~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~  438 (541)
                      ..++.+++.+||||+|||+||||++|+++...|++.++ +.++||.|||||.|+++.+++||||++| +||++|+||||+
T Consensus       292 ~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~r~~~~d-~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeRfl  369 (456)
T 3mdm_A          292 RYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEE-TLIDGVRVPGNTPLLFSTYVMGRMDTYF-EDPLTFNPDRFG  369 (456)
T ss_dssp             SSCCHHHHHHCHHHHHHHHHHHHHCCSSCCEEEEECSC-EEETTEEECSSEEEEECHHHHHTCTTTS-SSTTSCCGGGGS
T ss_pred             CCCCHHHHhcCHHHHHHHHHHHHhCCCccccccccCCc-eeECCEEECCCCEEEeehHHhcCCchhc-CCccccCccccC
Confidence            56899999999999999999999999999777766555 4559999999999999999999999999 999999999999


Q ss_pred             CCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhceEEEeCCcccceeeeeEEecCCceeEEEeeCCCC
Q 037522          439 SQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTLFMKYGLMMNVHPRELK  518 (541)
Q Consensus       439 ~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~  518 (541)
                      ++..     .....|+|||+|+|.|+|++||+.|++++++.|+++|+|++.++.++......+..|+.++.|++++|...
T Consensus       370 ~~~~-----~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~~~  444 (456)
T 3mdm_A          370 PGAP-----KPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQRFGLQEQATLKPLDPVLCTLRPRGWQ  444 (456)
T ss_dssp             TTSC-----CCSSSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEECTTCCCCEEESSSEEESSCCEEEEEECCC-
T ss_pred             CCCC-----CCCCcccCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCeEEeCCCCcceeecceEEecCCCeEEEEEEcCCC
Confidence            7542     23567999999999999999999999999999999999999888777666677788999999999999866


Q ss_pred             C
Q 037522          519 P  519 (541)
Q Consensus       519 ~  519 (541)
                      +
T Consensus       445 ~  445 (456)
T 3mdm_A          445 P  445 (456)
T ss_dssp             -
T ss_pred             C
Confidence            5


No 18 
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00  E-value=1.7e-69  Score=552.12  Aligned_cols=438  Identities=18%  Similarity=0.287  Sum_probs=327.0

Q ss_pred             CCCCCCCCCCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCC
Q 037522           25 GSLSGPRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKG  104 (541)
Q Consensus        25 ~~~pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~  104 (541)
                      +.||||++      ++++.  .++++.++.++++|||++|+   +   ++|+.+.++|  +||+.+++++.+++..|+++
T Consensus        29 ~lPPGP~~------l~~~~--~~~~~~~~~~l~~~yG~v~~---~---~~g~~~~vvv--~~~~~~~~il~~~~~~f~~r   92 (496)
T 3qz1_A           29 HLPPLVPG------FLHLL--QPNLPIHLLSLTQKLGPVYR---L---RLGLQEVVVL--NSKRTIEEAMIRKWVDFAGR   92 (496)
T ss_dssp             CCCCBCSC------SCTTS--SSCHHHHHHHGGGTSCSEEE---E---CSSSSCEEEE--CSTTHHHHTTTTSCSTTCBC
T ss_pred             CCCcCCcc------ccccC--CCcchHHHHHHHHHhCCEEE---E---EeCCcCEEEE--CCHHHHHHHHHhCcHhhCCC
Confidence            46778776      33442  24688899999999999877   3   6788899999  99999999998876788777


Q ss_pred             hhHHHHHHhhccC-cceecC-ChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHHHH
Q 037522          105 PTWQAAFHDLLGD-GIFNSD-GDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLLRM  182 (541)
Q Consensus       105 ~~~~~~~~~~~g~-~l~~~~-g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~  182 (541)
                      +..........+. +++.++ |+.|+++|+++++.|+.+.++.+ .+.+.+++ +.+++.+.+  ..++++|+.+++..+
T Consensus        93 ~~~~~~~~~~~~~~~l~~~~~g~~w~~~Rr~~~~~f~~~~~~~~-~~~i~~~~-~~l~~~l~~--~~~~~vd~~~~~~~~  168 (496)
T 3qz1_A           93 PQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRSSM-EPWVDQLT-QEFCERMRV--QAGAPVTIQKEFSLL  168 (496)
T ss_dssp             CCCTTTTTSCTTCCCSSSSCCSHHHHHHHHHHHHHHHC--CCCH-HHHHHHHH-HHHHHHHHT--TCSCCCHHHHHHTHH
T ss_pred             CCcchHHHhcCCCCceEECCCCHHHHHHHHHHHHHHhhccHhhH-HHHHHHHH-HHHHHHHHh--cCCCccCHHHHHHHH
Confidence            6543221112344 788888 99999999999999986655555 89999999 888888865  346789999999999


Q ss_pred             HHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhh---hchHHHHHHHHHhhhccccccccchHHHHHHHHHHH
Q 037522          183 TFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRF---LLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDII  259 (541)
Q Consensus       183 ~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  259 (541)
                      ++|+++.++||.. .       ...+...............   .......|+.++++....++..++.+.+.+++.+.+
T Consensus       169 ~~dvi~~~~fG~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i  240 (496)
T 3qz1_A          169 TCSIICYLTFGNK-E-------DTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPNPGLWRLKQAIENRDHMVEKQL  240 (496)
T ss_dssp             HHHHTTTTSTTCC-C-------HHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCC-C-------ChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCChHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999981 1       1222222211111100000   000001112222221223445566777888888888


Q ss_pred             HHHHHHHhccccccccccCCCCchhHHHHHhhcC---------CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcC
Q 037522          260 STRKLELASRDREQGEAATTTPHDDLLSRFMKKK---------ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQN  330 (541)
Q Consensus       260 ~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~---------~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~  330 (541)
                      +++++....           ....|+++.|++..         +.++++++.+++..+++||+|||+.+++|++++|+.|
T Consensus       241 ~~~~~~~~~-----------~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~  309 (496)
T 3qz1_A          241 RRHKESMVA-----------GQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHH  309 (496)
T ss_dssp             HHHHHSCCS-----------SCCSSSHHHHTTSSTTCCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHhhccC-----------CCccchHHHHHHHHHhccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhC
Confidence            887765322           23467888888632         1589999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCE
Q 037522          331 PRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGST  410 (541)
Q Consensus       331 P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~  410 (541)
                      |++|+||++|++++++.+...+      ..+ .+++.+||||+|||+|+||++|++|...+|.+.+++.++||.|||||.
T Consensus       310 P~~~~kl~~Ei~~~~~~~~~~~------~~~-~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~  382 (496)
T 3qz1_A          310 PEIQRRLQEELDRELGPGASCS------RVT-YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMV  382 (496)
T ss_dssp             HHHHHHHHHHHHHHHCSSSSSS------CCS-TTGGGSCHHHHHHHHHHHHHSCSSSSCCCEECSSCEECSSSEECTTCE
T ss_pred             HHHHHHHHHHHHHHhCCCcccC------CCC-hhhhhcCcHHHHHHHHHHHhcCCcccccCccCCCCceECCEEeCCCCE
Confidence            9999999999999987632100      445 889999999999999999999999986656555666669999999999


Q ss_pred             EEEehhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhceEEEeC
Q 037522          411 VTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVVP  490 (541)
Q Consensus       411 v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~  490 (541)
                      |.++.+++||||++| +||++|+||||++++.       ...++|||+|+|.|+|++||..|++++++.|+++|+|++.+
T Consensus       383 v~~~~~~~~~d~~~~-~dp~~F~PeR~l~~~~-------~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~  454 (496)
T 3qz1_A          383 VIPNLQGAHLDETVW-EQPHEFRPDRFLEPGA-------NPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPP  454 (496)
T ss_dssp             EEECHHHHTTCTTTS-SSTTSCCCCCCC---C-------CCCCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCT
T ss_pred             EEechHHhhCChhhc-CCcccCCcccccCCCC-------CcCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCC
Confidence            999999999999999 9999999999997542       12699999999999999999999999999999999999875


Q ss_pred             Cc---cccee--eeeEEecCCceeEEEeeCCC
Q 037522          491 GH---RVEQK--MSLTLFMKYGLMMNVHPREL  517 (541)
Q Consensus       491 ~~---~~~~~--~~~~~~~~~~~~v~~~~r~~  517 (541)
                      +.   ++...  .+++..| .++.|++++|+.
T Consensus       455 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~~R~~  485 (496)
T 3qz1_A          455 VGALPSLQPDPYCGVNLKV-QPFQVRLQPRGV  485 (496)
T ss_dssp             TCCCCCSCCSCCCSSCCCC-CCCCCCCCCC--
T ss_pred             CCCCCCCCcccCcceEecC-CceEEEEEEecc
Confidence            43   22222  2444554 589999999964


No 19 
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00  E-value=5.7e-68  Score=533.56  Aligned_cols=437  Identities=16%  Similarity=0.232  Sum_probs=318.2

Q ss_pred             CCCCC-CCCCCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCC
Q 037522           25 GSLSG-PRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPK  103 (541)
Q Consensus        25 ~~~pg-P~~~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~  103 (541)
                      +.||| |+++|++||++++..   +.+.++.+++++||++|+   +   ++++.+.++|  +||+.+++++.+++..|++
T Consensus         4 ~~PPg~p~~~P~iG~~~~~~~---~~~~~~~~l~~~yG~v~~---~---~~~~~~~~vv--~~~~~~~~il~~~~~~~~~   72 (455)
T 2cib_A            4 VALPRVSGGHDEHGHLEEFRT---DPIGLMQRVRDELGDVGT---F---QLAGKQVVLL--SGSHANEFFFRAGDDDLDQ   72 (455)
T ss_dssp             -CCCBCSCCCBTTBTHHHHTT---CHHHHHHHHHHHHCSEEE---E---EETTEEEEEE--CSHHHHHHHHHCCTTTEEC
T ss_pred             CCCCCCCCCCCCccCHHHHhh---ChHHHHHHHHHHcCCEEE---E---EeCCceEEEE--CCHHHHHHHHhcCccccCc
Confidence            56787 779999999998854   478889999999999866   3   5577788998  9999999999876566776


Q ss_pred             ChhHHHHHHhhccCcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHHHHH
Q 037522          104 GPTWQAAFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLLRMT  183 (541)
Q Consensus       104 ~~~~~~~~~~~~g~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  183 (541)
                      ++.+. .+...+|.+++ .+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+    ++++|+.+++..++
T Consensus        73 ~~~~~-~~~~~~g~~~~-~~~~~~~~~R~~~~~~f~~~~l~~~-~~~i~~~~-~~l~~~~~~----~~~vd~~~~~~~~~  144 (455)
T 2cib_A           73 AKAYP-FMTPIFGEGVV-FDASPERRKEMLHNAALRGEQMKGH-AATIEDQV-RRMIADWGE----AGEIDLLDFFAELT  144 (455)
T ss_dssp             TTSCG-GGHHHHC---------------------CCHHHHHHH-HHHHHHHH-HHHHTTCCS----EEEEEHHHHHHHHH
T ss_pred             ccchh-HHHhhcCCccc-cCcHHHHHHHhhhccccCHHHHHHH-HHHHHHHH-HHHHHHhCC----CCcEeHHHHHHHHH
Confidence            65442 22234565554 5799999999999999999999986 89999988 777665532    35799999999999


Q ss_pred             HHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHh-hhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHH
Q 037522          184 FDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQR-FLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTR  262 (541)
Q Consensus       184 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r  262 (541)
                      +++++.++||.++....    ...+.+.+..+....... ..+|        +++....++..++.+.+.+++.+.++++
T Consensus       145 ~~vi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p--------~l~~~~~~~~~~~~~~~~~~~~~~i~~r  212 (455)
T 2cib_A          145 IYTSSACLIGKKFRDQL----DGRFAKLYHELERGTDPLAYVDP--------YLPIESFRRRDEARNGLVALVADIMNGR  212 (455)
T ss_dssp             HHHHHHHHTCHHHHTTC----CHHHHHHHHHHHTTCCGGGGTCT--------TCSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCcchhh----hHHHHHHHHHHHhhhhHHHHhcc--------cCCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999875321    134444443332110000 0111        1111112233456677888888888887


Q ss_pred             HHHHhccccccccccCCCCchhHHHHHhhc----CCC-CCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHH
Q 037522          263 KLELASRDREQGEAATTTPHDDLLSRFMKK----KES-YSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKI  337 (541)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~----~~~-l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l  337 (541)
                      ++.....          ....|+++.|++.    +.. ++++++.++++.+++||+|||+.+++|++++|+.||++|++|
T Consensus       213 ~~~~~~~----------~~~~dll~~ll~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l  282 (455)
T 2cib_A          213 IANPPTD----------KSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAV  282 (455)
T ss_dssp             HHCC---------------CCCHHHHHHHCBCTTSSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred             HhcccCC----------CCcccHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHH
Confidence            6532110          1123899999863    223 899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhh
Q 037522          338 ATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYA  417 (541)
Q Consensus       338 r~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~  417 (541)
                      |+||+++++.+          ..++.+++.+||||+|||+|+||++|+++...|.+.++ +.++||.|||||.|.++.++
T Consensus       283 ~~Ei~~~~~~~----------~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d-~~l~g~~Ip~Gt~V~~~~~~  351 (455)
T 2cib_A          283 IDELDELYGDG----------RSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGE-FEVQGHRIHEGDLVAASPAI  351 (455)
T ss_dssp             HHHHHHHGGGC----------CCHHHHTTSCCHHHHHHHHHHHHHSCSCCCEEEEECSC-EEETTEEECTTCEEEECHHH
T ss_pred             HHHHHHHhCCC----------CCCCHHHHhcCHHHHHHHHHHHhcCCcccccceeeCCC-ceECCEEECCCCEEEEChHH
Confidence            99999998753          45789999999999999999999999998765555554 44599999999999999999


Q ss_pred             hccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhceEEEeCCc-ccce
Q 037522          418 IGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVVPGH-RVEQ  496 (541)
Q Consensus       418 ~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~-~~~~  496 (541)
                      +||||++| +||++|+||||++++..  ....+..|+|||+|+|.|+|++||++|++++++.||++|+|++..+. .+..
T Consensus       352 ~~rdp~~~-~dP~~F~PeR~l~~~~~--~~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~  428 (455)
T 2cib_A          352 SNRIPEDF-PDPHDFVPARYEQPRQE--DLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRN  428 (455)
T ss_dssp             HTTCTTTS-SSTTSCCGGGGSTTTCH--HHHCTTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCE
T ss_pred             hcCCcccC-CCccccCcccCCCCCcc--cccCCccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCcccccc
Confidence            99999999 99999999999975431  01125579999999999999999999999999999999999986332 2211


Q ss_pred             -eeeeEEecCCceeEEEeeCC
Q 037522          497 -KMSLTLFMKYGLMMNVHPRE  516 (541)
Q Consensus       497 -~~~~~~~~~~~~~v~~~~r~  516 (541)
                       ....+..|..++.|++++|+
T Consensus       429 ~~~~~~~~p~~~~~v~~~~R~  449 (455)
T 2cib_A          429 DHSKMVVQLAQPAAVRYRRRT  449 (455)
T ss_dssp             ECSSSSCEECSCCEEEEEEC-
T ss_pred             ccccccccCCCCceEEEEECc
Confidence             12345567779999999995


No 20 
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00  E-value=9.1e-68  Score=534.42  Aligned_cols=435  Identities=22%  Similarity=0.362  Sum_probs=316.8

Q ss_pred             cCCCCCCCCCCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCC-C
Q 037522           24 SGSLSGPRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNY-P  102 (541)
Q Consensus        24 ~~~~pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~-~  102 (541)
                      +..||||+++|++||++.+..   +++.++.++++ ||++|+   +   ++++.+.++|  +||+.+++++.++  .| .
T Consensus        22 ~eppPgP~~~P~iG~~~~~~~---~p~~~~~~l~~-yGpv~~---~---~~g~~~~~vv--~~~~~i~~il~~~--~~~~   87 (467)
T 3dbg_A           22 REPPVAGGGVPLLGHGWRLAR---DPLAFMSQLRD-HGDVVR---I---KLGPKTVYAV--TNPELTGALALNP--DYHI   87 (467)
T ss_dssp             CBCCEECCCCSTTHHHHHHHH---CHHHHHHHHGG-GCSEEE---E---EETTEEEEEE--CSHHHHHHHHHCT--TC--
T ss_pred             CCCCCCCCCCCcccchHHhcc---CHHHHHHHHHH-hCCEEE---E---EeCCccEEEE--CCHHHHHHHHhCc--Cccc
Confidence            346889999999999999975   47788888877 999876   3   5678888899  9999999999886  56 4


Q ss_pred             CChhHHHHHHhhcc-CcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHHH
Q 037522          103 KGPTWQAAFHDLLG-DGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLLR  181 (541)
Q Consensus       103 ~~~~~~~~~~~~~g-~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~  181 (541)
                      +.+.+ ..+..++| .+++..+|+.|+++|+++++.|+.+.++.+ .+.+.+++ +.+++.+.    .++++|+.+.+..
T Consensus        88 ~~~~~-~~~~~~~g~~~l~~~dg~~h~~~R~~l~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~----~~~~~d~~~~~~~  160 (467)
T 3dbg_A           88 AGPLW-ESLEGLLGKEGVATANGPLHRRQRRTIQPAFRLDAIPAY-GPIMEEEA-HALTERWQ----PGKTVDATSESFR  160 (467)
T ss_dssp             -----------------------------CGGGHHHHSTTTSTTT-HHHHHHHH-HHHHHHSC----TTSCEEHHHHHHH
T ss_pred             ccchH-HHHHHhcCCCCcccCCcHHHHHHHHHhhhhhCHHHHHHH-HHHHHHHH-HHHHHHhc----cCCcCcHHHHHHH
Confidence            44333 33344566 788889999999999999999999999886 89998888 77776653    2568999999999


Q ss_pred             HHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHH
Q 037522          182 MTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIIST  261 (541)
Q Consensus       182 ~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  261 (541)
                      +++++++.++||.++....    ...+...+..+..........|.   .+..+++....++..++.+.+.+++.+.+++
T Consensus       161 ~~~~vi~~~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~p~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  233 (467)
T 3dbg_A          161 VAVRVAARCLLRGQYMDER----AERLCVALATVFRGMYRRMVVPL---GPLYRLPLPANRRFNDALADLHLLVDEIIAE  233 (467)
T ss_dssp             HHHHHHHHHHSCSSCCHHH----HHHHHHHHHHHHHC---------------------------CCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCcccchh----HHHHHHHHHHHHHHHHHHhccch---hhhhhCCChHhHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999875311    12333333333222211111221   1122333334556677888899999998887


Q ss_pred             HHHHHhccccccccccCCCCchhHHHHHhhcC----CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHH
Q 037522          262 RKLELASRDREQGEAATTTPHDDLLSRFMKKK----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKI  337 (541)
Q Consensus       262 r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~----~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l  337 (541)
                      +++.   +          ....|+++.|++..    +.++++++.++++.+++||+|||+.+++|++++|+.||++|++|
T Consensus       234 r~~~---~----------~~~~dll~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l  300 (467)
T 3dbg_A          234 RRAS---G----------QKPDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRI  300 (467)
T ss_dssp             HTTC---C----------SSCCSHHHHHTTC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred             HHhc---C----------CCchHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence            7642   1          24468999998632    24899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhh
Q 037522          338 ATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYA  417 (541)
Q Consensus       338 r~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~  417 (541)
                      |+|+++++++           ..++.+++.+||||+|||+|+||++|+++...|++.+| +.++||.||||+.|.++.++
T Consensus       301 r~Ei~~~~~~-----------~~~~~~~l~~l~yl~a~i~E~lRl~p~~~~~~R~~~~d-~~l~g~~Ip~Gt~V~~~~~~  368 (467)
T 3dbg_A          301 RDEVEAVTGG-----------RPVAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAE-SELGGYRIPAGADIIYSPYA  368 (467)
T ss_dssp             HHHHHHHHTT-----------SCCCHHHHTTCHHHHHHHHHHHHHSCSCCCEEEECSSC-EEETTEEECTTCEEEECHHH
T ss_pred             HHHHHHHhCC-----------CCCCHHHHhhCHHHHHHHHHHhhcCCCccccceeeCCC-ccCCCEEECCCCEEEEChHH
Confidence            9999999864           45799999999999999999999999998766656555 44599999999999999999


Q ss_pred             hccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhceEEEeCCccccee
Q 037522          418 IGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVVPGHRVEQK  497 (541)
Q Consensus       418 ~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~  497 (541)
                      +||||++| +||++|||+||+++++   ....+..|+|||+|+|.|+|++||..|++++++.|+++|+|++.++......
T Consensus       369 ~~rdp~~~-~dP~~F~PeRfl~~~~---~~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~  444 (467)
T 3dbg_A          369 IQRDPKSY-DDNLEFDPDRWLPERA---ANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSNDAVR  444 (467)
T ss_dssp             HHTCTTTC-TTTTCCCGGGGSHHHH---TTSCTTSCCSSCSSSSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTCEEEEE
T ss_pred             hcCCchhc-CCccccCCccCCCCcc---ccCCCccccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceeEeCCCCCCccc
Confidence            99999999 9999999999997543   1224567999999999999999999999999999999999999887776666


Q ss_pred             eeeEEecCCceeEEEeeCC
Q 037522          498 MSLTLFMKYGLMMNVHPRE  516 (541)
Q Consensus       498 ~~~~~~~~~~~~v~~~~r~  516 (541)
                      .+.+..|+ ++.++-..|-
T Consensus       445 ~~~~~~p~-~l~~~~~~~~  462 (467)
T 3dbg_A          445 VGITLRPH-DLLVRPVARH  462 (467)
T ss_dssp             ESSSEEEE-ECEEEEEECC
T ss_pred             eeeEecCC-CCccchhhhh
Confidence            66777764 6666655543


No 21 
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00  E-value=8.4e-67  Score=526.91  Aligned_cols=437  Identities=18%  Similarity=0.300  Sum_probs=340.0

Q ss_pred             cCCCCC-CCCCCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCC
Q 037522           24 SGSLSG-PRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYP  102 (541)
Q Consensus        24 ~~~~pg-P~~~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~  102 (541)
                      .+.||| |+++|++||++++..   +.+.++.+++++||++|+   +   ++++.+.++|  ++|+.+++++.++...+.
T Consensus        10 ~~~PPg~P~~lP~iG~l~~~~~---~~~~~~~~~~~~yG~v~~---l---~l~g~~~vvv--~~~~~~~~il~~~~~~~~   78 (461)
T 3i3k_A           10 VKSPPYIFSPIPFLGHAIAFGK---SPIEFLENAYEKYGPVFS---F---TMVGKTFTYL--LGSDAAALLFNSKNEDLN   78 (461)
T ss_dssp             CCCCCBCCCSSTTTBTHHHHHH---CHHHHHHHHHHHHCSEEE---E---EETTEEEEEE--CSHHHHHHHHHCCTTTEE
T ss_pred             CCCCCCCCCCCCccccHHhhcc---CHHHHHHHHHHHhCCEEE---E---EecCceEEEE--eChHHHHHHHhccccccc
Confidence            357899 889999999999864   478889999999999877   3   6678899999  999999999998766777


Q ss_pred             CChhHHHHHHhhccCcceec-CChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHHH
Q 037522          103 KGPTWQAAFHDLLGDGIFNS-DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLLR  181 (541)
Q Consensus       103 ~~~~~~~~~~~~~g~~l~~~-~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~  181 (541)
                      +++.+......++|.+++.. +|+.|+++|+++.+.|+.+.++.+ .+.+.+++ +.+++.+.+    +..+|+.+.+..
T Consensus        79 ~~~~~~~~~~~~~g~g~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~-~~~~~~~~-~~ll~~l~~----~~~~dl~~~~~~  152 (461)
T 3i3k_A           79 AEDVYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQH-VSIIEKET-KEYFESWGE----SGEKNVFEALSE  152 (461)
T ss_dssp             SHHHHHHHHHHHHCTTSGGGSCHHHHHHHHHHHHHHSSHHHHHHH-HHHHHHHH-HHHGGGGCS----EEEEEHHHHHHH
T ss_pred             cchHHHHhhhhhcCCeeeeCCCcHHHHHHHHHHhhhhCHHHHHHH-HHHHHHHH-HHHHHHhhh----cCCcCHHHHHHH
Confidence            76655555556678877654 799999999999999999999987 89999988 777666642    346899999999


Q ss_pred             HHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHH
Q 037522          182 MTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIIST  261 (541)
Q Consensus       182 ~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  261 (541)
                      +++++++.++||.++....    ...+.+.+..+....      ....+.+..+++....++..++.+.+.+++.+.+++
T Consensus       153 ~~~~~~~~~~~G~~~~~~~----~~~~~~~~~~~~~~~------~~~~~~~P~~l~~~~~~~~~~~~~~~~~~~~~~i~~  222 (461)
T 3i3k_A          153 LIILTASHCLHGKEIRSQL----NEKVAQLYADLDGGF------SHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQK  222 (461)
T ss_dssp             HHHHHHHHHHTCHHHHHTC----CHHHHHHHHHHHTTS------SHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccHhhhhHH----HHHHHHHHHHHHhcc------ccchhhcccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998764321    122333322221110      000001111222222344455667777777777776


Q ss_pred             HHHHHhccccccccccCCCCchhHHHHHhhc----CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHH
Q 037522          262 RKLELASRDREQGEAATTTPHDDLLSRFMKK----KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKI  337 (541)
Q Consensus       262 r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~----~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l  337 (541)
                      +++.   .          ....|+++.+++.    +..++++++...++.+++||+|||+.+++|++++|+.||++|+++
T Consensus       223 ~~~~---~----------~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l  289 (461)
T 3i3k_A          223 RRQS---Q----------EKIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKC  289 (461)
T ss_dssp             HTTC---C----------CCCCSHHHHHHTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred             HHhc---c----------cccccHHHHHHHhhhccCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHH
Confidence            6432   1          2456899999863    234899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhh
Q 037522          338 ATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYA  417 (541)
Q Consensus       338 r~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~  417 (541)
                      |+|++++++...         ..++.+++.+||||+|||+||||++|+++...|++.++.+ ++||.||||+.|+++.++
T Consensus       290 ~~Ei~~~~~~~~---------~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~r~~~~d~~-~~g~~ip~G~~v~~~~~~  359 (461)
T 3i3k_A          290 YLEQKTVCGENL---------PPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQT-VAGYTIPPGHQVCVSPTV  359 (461)
T ss_dssp             HHHHHHHHCTTC---------CCCCHHHHHTCHHHHHHHHHHHHHSCSCCCEEEEECSCEE-ETTEEECTTCEEEECHHH
T ss_pred             HHHHHHHhcCCC---------CCCCHHHHhcChHHHHHHHHHHhcCCCccccccccCCCcc-CCCEEECCCCEEEEChHH
Confidence            999999987642         4578999999999999999999999999766555555544 599999999999999999


Q ss_pred             hccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhceEEEeCCccccee
Q 037522          418 IGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVVPGHRVEQK  497 (541)
Q Consensus       418 ~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~  497 (541)
                      +||||++| +||++|+||||++.++   ....+..|+|||+|+|.|+|++||..|++++++.||++|+|++.++......
T Consensus       360 ~~~d~~~~-~~p~~F~P~Rfl~~~~---~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~  435 (461)
T 3i3k_A          360 NQRLKDSW-VERLDFNPDRYLQDNP---ASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVN  435 (461)
T ss_dssp             HTTCTTTC-TTTTCCCGGGGGSCCH---HHHSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBC
T ss_pred             hcCCcccC-CCcccCCCCCCCCCCC---CCCCCcceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCCCCCcc
Confidence            99999999 9999999999997653   1123567999999999999999999999999999999999999876533322


Q ss_pred             -eeeEEecCCceeEEEee
Q 037522          498 -MSLTLFMKYGLMMNVHP  514 (541)
Q Consensus       498 -~~~~~~~~~~~~v~~~~  514 (541)
                       ......|..++.|.-++
T Consensus       436 ~~~~~~~p~~~~~~~~~~  453 (461)
T 3i3k_A          436 YTTMIHTPENPVIRYKRR  453 (461)
T ss_dssp             CSSSSCCBSSCEEEEEEC
T ss_pred             cceeecCCCCceEEeecc
Confidence             23445677766665443


No 22 
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00  E-value=9.7e-67  Score=525.40  Aligned_cols=436  Identities=17%  Similarity=0.246  Sum_probs=343.1

Q ss_pred             cCCCCCCCC-CCcCCChhhhhccchhhHHHHHHHHHHcC-CcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCC
Q 037522           24 SGSLSGPRV-WPLLGSLPGLFQNSKRLHDWISDNLRACG-GTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNY  101 (541)
Q Consensus        24 ~~~~pgP~~-~P~lG~~~~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~  101 (541)
                      .+.||||++ +|++||++++..   +.+.++.++++||| ++|+   +   ++++.+.++|  +||+.+++++.+++..|
T Consensus         2 ~~~PPg~p~~~P~iG~~~~~~~---~~~~~~~~~~~~yG~~i~~---~---~~~~~~~vvv--~~p~~~~~il~~~~~~~   70 (450)
T 3gw9_A            2 GKLPPVYPVTVPILGHIIQFGK---SPLGFMQECKRQLKSGIFT---I---NIVGKRVTIV--GDPHEHSRFFLPRNEVL   70 (450)
T ss_dssp             CSCCCBCCCCSTTTBTHHHHHH---CHHHHHHHHHHHHTCSEEE---E---EETTEEEEEE--CCGGGTHHHHSSCTTTE
T ss_pred             CCCCCCCCCCcchhccHHHHcc---CHHHHHHHHHHHhCCCeEE---E---EECCEeEEEE--eCHHHHHHHHhCChhhc
Confidence            457899665 999999999865   47888999999999 8876   3   6688899999  99999999999876778


Q ss_pred             CCChhHHHHHHhhccCccee-cCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhh-HHHHhhhcCcceeHHHHH
Q 037522          102 PKGPTWQAAFHDLLGDGIFN-SDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCP-ILEVAQLEAKPVDFQDLL  179 (541)
Q Consensus       102 ~~~~~~~~~~~~~~g~~l~~-~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~-~l~~~~~~~~~vdl~~~~  179 (541)
                      .+++.+.. +..++|.+++. .+++.|+++|+++.+.|+.+.++.+ .+.+.+++ +.+++ .+.+   .++++|+.+++
T Consensus        71 ~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~-~~~i~~~~-~~ll~~~~~~---~~~~vd~~~~~  144 (450)
T 3gw9_A           71 SPREVYSF-MVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNF-VPAIQHEV-RKFMAANWDK---DEGEINLLEDC  144 (450)
T ss_dssp             ESTGGGGG-GHHHHCTTSGGGSCHHHHHHHHHHHHHTTSGGGCTTH-HHHHHHHH-HHHHHHHSCS---SEEEEEHHHHH
T ss_pred             cchhhHHH-HHHHhcCCcccCCCcHHHHHHHHHHHHHHhHHHHHHH-HHHHHHHH-HHHHHHHhcc---CCCcccHHHHH
Confidence            77765432 33456777644 5899999999999999999999886 89998888 66655 4432   34579999999


Q ss_pred             HHHHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHH
Q 037522          180 LRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDII  259 (541)
Q Consensus       180 ~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  259 (541)
                      ..+++++++.++||.++.....   ...+.+.+..+......    ...+.++..+++....++..++.+.+.+++.+.+
T Consensus       145 ~~~~~~~i~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~----~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i  217 (450)
T 3gw9_A          145 STMIINTACQCLFGEDLRKRLD---ARRFAQLLAKMESSLIP----AAVFLPILLKLPLPQSARCHEARTELQKILSEII  217 (450)
T ss_dssp             HHHHHHHHHHHHSCHHHHHHSC---HHHHHHHHHHHHHTCCG----GGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCcchhhhhh---hHHHHHHHHHHHhcccc----chhcccchhccCCchhHHHHHHHHHHHHHHHHHH
Confidence            9999999999999988754321   23343333333211110    0111122223332333455667788899999999


Q ss_pred             HHHHHHHhccccccccccCCCCchhHHHHHhhc----CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHh--cChHH
Q 037522          260 STRKLELASRDREQGEAATTTPHDDLLSRFMKK----KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVS--QNPRV  333 (541)
Q Consensus       260 ~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~----~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~--~~P~~  333 (541)
                      +++++......         ....|+++.+++.    +..++++++.++++.+++||+|||+.+++|++++|+  .||++
T Consensus       218 ~~r~~~~~~~~---------~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~  288 (450)
T 3gw9_A          218 IARKEEEVNKD---------SSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKH  288 (450)
T ss_dssp             HHHHHHHHHTS---------CCCCSHHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHH
T ss_pred             HHHHHhhcccC---------CccchHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhH
Confidence            88876532221         3457899999863    234899999999999999999999999999999999  99999


Q ss_pred             HHHHHHHHHHHhhhhcCCCCcccccCCCCHHhh-hcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEE
Q 037522          334 EDKIATEICTVLLETRGRDVSKWVEEPLVFEEV-DRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVT  412 (541)
Q Consensus       334 ~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l-~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~  412 (541)
                      |+++|+|++++  .           ..++.+++ .+||||+|||+||||++|+++...|++.+|.+ ++||.|||||.|+
T Consensus       289 ~~~l~~Ei~~~--~-----------~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~-~~g~~ip~Gt~v~  354 (450)
T 3gw9_A          289 LEALRKEIEEF--P-----------AQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVK-VGSYVVPKGDIIA  354 (450)
T ss_dssp             HHHHHHHHTTC--C-----------SSCCHHHHHHHCHHHHHHHHHHHHHSCSCCCEEEEECSCEE-ETTEEECTTCEEE
T ss_pred             HHHHHHHHHhc--c-----------CCCChHHHHHhcHHHHHHHHHHHHhCCchhccccccccccc-cCCEEECCCCEEE
Confidence            99999999987  1           55789999 99999999999999999999887666655544 5999999999999


Q ss_pred             EehhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhceEEEeCCc
Q 037522          413 YSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVVPGH  492 (541)
Q Consensus       413 ~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~  492 (541)
                      ++.+++||||++| +||++|+|||+.         ..+..|+|||+|+|.|+|++||..|++++++.||++|+|++.++.
T Consensus       355 ~~~~~~~~d~~~~-~dp~~F~PeR~~---------~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~  424 (450)
T 3gw9_A          355 CSPLLSHHDEEAF-PEPRRWDPERDE---------KVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDE  424 (450)
T ss_dssp             ECHHHHTTCTTTS-SSTTSCCTTCCC---------SSTTCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSS
T ss_pred             EChHHhhCChhhc-CCccccCCCcCc---------CCCCceeCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCC
Confidence            9999999999999 999999999932         124569999999999999999999999999999999999997554


Q ss_pred             cccee-eeeEEecC-CceeEEEeeCC
Q 037522          493 RVEQK-MSLTLFMK-YGLMMNVHPRE  516 (541)
Q Consensus       493 ~~~~~-~~~~~~~~-~~~~v~~~~r~  516 (541)
                      ..... ..++..|. .++.|++++|+
T Consensus       425 ~~~~~~~~~~~~p~~~~~~v~~~~R~  450 (450)
T 3gw9_A          425 VPDPDYHTMVVGPTASQCRVKYIRRK  450 (450)
T ss_dssp             CCCEETTSSSCEECGGGCEEEEEECC
T ss_pred             CCCCccccceecCCCCceEeEeeecC
Confidence            22222 23556677 79999999985


No 23 
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00  E-value=7.6e-63  Score=502.46  Aligned_cols=451  Identities=16%  Similarity=0.157  Sum_probs=313.1

Q ss_pred             CCCCCCCC-CCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCC
Q 037522           25 GSLSGPRV-WPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPK  103 (541)
Q Consensus        25 ~~~pgP~~-~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~  103 (541)
                      +.||||++ +|++||++++..   +.+.++.++++|||++|+   +   ++|+.+.++|  +||+.+++++.+. ..+..
T Consensus        13 ~~pPgp~~~~P~iG~~~~~~~---~~~~~~~~~~~kyG~i~~---~---~~g~~~~vvv--~dp~~~~~il~~~-~~~~~   80 (491)
T 3dax_A           13 GEPPLENGLIPYLGCALQFGA---NPLEFLRANQRKHGHVFT---C---KLMGKYVHFI--TNPLSYHKVLCHG-KYFDW   80 (491)
T ss_dssp             TCCCEEEEEESCTTTTGGGTC---CHHHHHHHHHHHHCSEEE---E---EETTEEEEEE--CCGGGTHHHHSCC-TTEES
T ss_pred             CCCCcCCCcccchhhHHHHhh---CHHHHHHHHHHhcCCeEE---E---EECCeEEEEE--cChHHHHHHHcCC-ccCCh
Confidence            36788887 899999998854   478889999999999876   3   6788888999  9999999999876 32444


Q ss_pred             ChhHHHHHHhhccCcce-ecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHh---hhcCcceeHHHHH
Q 037522          104 GPTWQAAFHDLLGDGIF-NSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVA---QLEAKPVDFQDLL  179 (541)
Q Consensus       104 ~~~~~~~~~~~~g~~l~-~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~---~~~~~~vdl~~~~  179 (541)
                      .+.....+...+|.+++ ..+|+.|+++|+.+.+.|+.+.+..+ .+.+.+++ ..+++.....   ...+..+++..++
T Consensus        81 ~~~~~~~~~~~~g~~~~~~~~g~~w~~~r~~~~~~f~~~~l~~~-~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~l~~~~  158 (491)
T 3dax_A           81 KKFHFATSAKAFGHRSIDPMDGNTTENINDTFIKTLQGHALNSL-TESMMENL-QRIMRPPVSSNSKTAAWVTEGMYSFC  158 (491)
T ss_dssp             SHHHHHHHHHHHTCCCCCGGGTSBCCCHHHHHHHHHSHHHHHHH-HHHHHHHH-HHHHC----------CCEEEEHHHHH
T ss_pred             HHHHHHHHHHHcCCCcccccchhHHHHHHHHHHHhcCcccHHHH-HHHHHHHH-HHHHHhhccCCcCCCCceeccHHHHH
Confidence            44443344445677766 67889999999998888998888776 66666666 3333322111   1233468999999


Q ss_pred             HHHHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHH
Q 037522          180 LRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDII  259 (541)
Q Consensus       180 ~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  259 (541)
                      ..+++++++.++||.+....+      ........+...+..   +...+..+...++....++..++.+.+.+.+   .
T Consensus       159 ~~~i~~~~~~~~fG~~~~~~~------~~~~~~~~~~~~~~~---~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~---~  226 (491)
T 3dax_A          159 YRVMFEAGYLTIFGRDLTRRD------TQKAHILNNLDNFKQ---FDKVFPALVAGLPIHMFRTAHNAREKLAESL---R  226 (491)
T ss_dssp             HHHHHHHHHHHHHCBCSTTGG------GHHHHHHHHHHHHHH---HHHHHHHHHTTCCGGGSHHHHHHHHHHHHHT---S
T ss_pred             HHHHHHHhHHHHcCccccccc------chhhhhhHHHHHHHH---HHHHhHHHHHhCCHhhhhHHHHHHHHHHHHH---H
Confidence            999999999999998765321      112222222221111   0111111212222111111122222222111   1


Q ss_pred             HHHHHHHhccccccccccCCCCchhHHHHHhh---cCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHH
Q 037522          260 STRKLELASRDREQGEAATTTPHDDLLSRFMK---KKESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDK  336 (541)
Q Consensus       260 ~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~---~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~  336 (541)
                      +++.   ...          ....|+++.+++   +...++++++.++++.+++||++||+++++|++++|+.||++|++
T Consensus       227 ~~~~---~~~----------~~~~d~l~~ll~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~k  293 (491)
T 3dax_A          227 HENL---QKR----------ESISELISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKA  293 (491)
T ss_dssp             HHHH---TTC----------BSCCHHHHHHHHHHHHHBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHH
T ss_pred             HHHh---hcc----------cchhHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHH
Confidence            1111   111          134678887764   223489999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCcccc---CCcccCCCCEEEE
Q 037522          337 IATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLP---TGTFVPAGSTVTY  413 (541)
Q Consensus       337 lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~---~g~~Ip~Gt~v~~  413 (541)
                      ||+||+++++..+...........++.+++.+||||+|||+||||++|+ +...|.+.+|.++.   +||.|||||.|++
T Consensus       294 l~~Ei~~v~~~~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~l~~~~~g~~ip~Gt~v~~  372 (491)
T 3dax_A          294 ATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SLNIRTAKEDFTLHLEDGSYNIRKDDIIAL  372 (491)
T ss_dssp             HHHHHHHHHHTTTCCCCSSSCCCCCCHHHHHCCHHHHHHHHHHHHHHEE-ECEEEEESSSEEEEETTEEEEECTTCEEEE
T ss_pred             HHHHHHHHhhccccccccCCCccccCHHHHhcCHHHHHHHHHHHhcCCC-ccceeEecCCeEeecCCCcEEeCCCCEEEe
Confidence            9999999987542100000000146899999999999999999999974 66655555554442   6899999999999


Q ss_pred             ehhhhccCCCCccCCCCCccCCCCCCCCCCCC------CCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhceEE
Q 037522          414 SIYAIGRMKFIWGEDCLEFKPERWLSQDGNKY------EGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLT  487 (541)
Q Consensus       414 ~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~------~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~  487 (541)
                      +.+++||||++| +||++|+||||+++++...      ....+..|+|||+|+|.|+|++||++|+++++|.||++|+|+
T Consensus       373 ~~~~~~~d~~~~-~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~  451 (491)
T 3dax_A          373 YPQLMHLDPEIY-PDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELE  451 (491)
T ss_dssp             CTHHHHTCTTTS-SSTTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEE
T ss_pred             chHhhcCCcccC-CCHHHcCCccccCCCccccccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEE
Confidence            999999999999 9999999999997653210      012356799999999999999999999999999999999999


Q ss_pred             EeCCcc--c--cee-eee-EEecCCceeEEEeeCC
Q 037522          488 VVPGHR--V--EQK-MSL-TLFMKYGLMMNVHPRE  516 (541)
Q Consensus       488 ~~~~~~--~--~~~-~~~-~~~~~~~~~v~~~~r~  516 (541)
                      +.++..  .  +.. .+. +..|+.++.+++|..-
T Consensus       452 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~~  486 (491)
T 3dax_A          452 LIEGQAKCPPLDQSRAGLGILPPLNDIEFKYKFKH  486 (491)
T ss_dssp             ETTTTCCCCCBCGGGTBEEECCBSSCCEEEEEECC
T ss_pred             EccCCCCCCCCCcccccccccCCCCCceEEEEecc
Confidence            876531  1  111 233 4567778888887654


No 24 
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00  E-value=6.9e-63  Score=502.22  Aligned_cols=448  Identities=16%  Similarity=0.143  Sum_probs=329.4

Q ss_pred             CCCCCCCC-CCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCC
Q 037522           25 GSLSGPRV-WPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPK  103 (541)
Q Consensus        25 ~~~pgP~~-~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~  103 (541)
                      +.||||++ +|++||++.+..   +++.++.+++++||++|+   +   .+++.++++|  +||+.+++++.++ ..+..
T Consensus        13 ~~PPgp~~~lPliG~~~~~~~---~p~~~~~~l~~~yGpv~~---~---~lg~~~~vvv--~~p~~v~~vl~~~-~~~~~   80 (491)
T 3v8d_A           13 GEPPLENGLIPYLGCALQFGA---NPLEFLRANQRKHGHVFT---C---KLMGKYVHFI--TNPLSYHKVLCHG-KYFDW   80 (491)
T ss_dssp             TSCCEEEEEESSTTTTGGGTC---CHHHHHHHHHHHHCSEEE---E---EETTEEEEEE--CCGGGHHHHHSCC-TTEES
T ss_pred             CCCCCCCCCcceeccHHHHhc---CHHHHHHHHHHHcCCceE---E---EECCEEEEEE--cCHHHHHHHHhcC-Cccch
Confidence            46899998 699999999965   589999999999999877   3   6678899999  9999999999876 44555


Q ss_pred             ChhHHHHHHhhccCcc-eecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHH-HHhhh--cCcceeHHHHH
Q 037522          104 GPTWQAAFHDLLGDGI-FNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPIL-EVAQL--EAKPVDFQDLL  179 (541)
Q Consensus       104 ~~~~~~~~~~~~g~~l-~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l-~~~~~--~~~~vdl~~~~  179 (541)
                      ...........+|.+. ...+|+.|+++|+.+.+.|+++.++.+ .+.+.+++ +.+++.+ .....  .+..+++.+++
T Consensus        81 ~~~~~~~~~~~~g~~~~~~~~g~~~~~~Rr~~~~~f~~~~l~~~-~~~i~~~~-~~ll~~~~~~~~~~~~~~~~~l~~~~  158 (491)
T 3v8d_A           81 KKFHFALSAKAFGHRSIDPMDGNTTENINDTFIKTLQGHALNSL-TESMMENL-QRIMRPPVSSNSKTAAWVTEGMYSFC  158 (491)
T ss_dssp             SHHHHHHHHHHHTCCCCCGGGSSBCCCHHHHHHHHHSHHHHHHH-HHHHHHHH-HHHHSCCSSCGGGGCSCEEEEHHHHH
T ss_pred             HHHHHHHHHHhcCCcccccccchhHHHHHHHHHHHcCccchHHH-HHHHHHHH-HHHHHhhhhcccCCCCCcccCHHHHH
Confidence            5555555556677554 445899999999999999999999987 89988888 5555432 22211  34678999999


Q ss_pred             HHHHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHH
Q 037522          180 LRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDII  259 (541)
Q Consensus       180 ~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  259 (541)
                      ..+++++++..+||.+....+..  ...+.+....+...       ...+..+...++....++..++.+++.+++.+.+
T Consensus       159 ~~~~~~~~~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~-------~~~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~~  229 (491)
T 3v8d_A          159 YRVMFEAGYLTIFGRDLTRRDTQ--KAHILNNLDNFKQF-------DKVFPALVAGLPIHMFRTAHNAREKLAESLRHEN  229 (491)
T ss_dssp             HHHHHHHHHHHHHCBCCSCGGGH--HHHHHHHHHHHHHH-------HHHHHHHHTTCCGGGCHHHHHHHHHHHHHTSHHH
T ss_pred             HHHHHHHHHHHHcCccccccchh--hhhhHHHHHHHHHH-------HHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999987632110  01122222222111       1111112222333334444455555555444433


Q ss_pred             HHHHHHHhccccccccccCCCCchhHHHHHhh---cCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHH
Q 037522          260 STRKLELASRDREQGEAATTTPHDDLLSRFMK---KKESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDK  336 (541)
Q Consensus       260 ~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~---~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~  336 (541)
                      .+++                ....|+++.+++   +.+.++++++..+++.+++||++||+.+++|++++|+.||++|++
T Consensus       230 ~~~~----------------~~~~d~l~~l~~~~~~~~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~  293 (491)
T 3v8d_A          230 LQKR----------------ESISELISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKA  293 (491)
T ss_dssp             HTTC----------------BSCCHHHHHHHHHHHHHBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHH
T ss_pred             Hhcc----------------ccccHHHHHHHHHhhccCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHH
Confidence            3221                134678888774   334589999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCcccc----CCcccCCCCEEE
Q 037522          337 IATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLP----TGTFVPAGSTVT  412 (541)
Q Consensus       337 lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~----~g~~Ip~Gt~v~  412 (541)
                      ||+||+++++..+...........++.+++.+||||+|||+|+||++| ++...|.+.++ +.+    +||.||||+.|.
T Consensus       294 l~~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~a~i~E~lRl~p-~~~~~R~~~~d-~~~~~~~~g~~ip~G~~v~  371 (491)
T 3v8d_A          294 ATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSS-ASLNIRTAKED-FTLHLEDGSYNIRKDDIIA  371 (491)
T ss_dssp             HHHHHHHHHHHTTCCCCSSSSCCCCCHHHHHCCHHHHHHHHHHHHHHE-EECEEEEESSS-EEEECSSCEEEECTTCEEE
T ss_pred             HHHHHHHHhhccccccccccccccCCHHHHhcChHHHHHHHHHhhcCC-CCccceeccCC-eeEeecCCcEEeCCCCEEE
Confidence            999999999765321000000135789999999999999999999997 44555555544 445    899999999999


Q ss_pred             EehhhhccCCCCccCCCCCccCCCCCCCCCCCC------CCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhceE
Q 037522          413 YSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKY------EGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHL  486 (541)
Q Consensus       413 ~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~------~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~  486 (541)
                      ++.+++||||++| +||++|||+||++.++...      ....+..|+|||+|+|.|+|++||..|++++++.|+++|+|
T Consensus       372 ~~~~~~~~d~~~~-~~p~~F~p~R~~~~~~~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~  450 (491)
T 3v8d_A          372 LYPQLMHLDPEIY-PDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFEL  450 (491)
T ss_dssp             ECTHHHHTCTTTS-SSTTSCCTTTTBCTTSSBCCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEE
T ss_pred             ecchhhcCCcccC-CCccccCcccccCCCCCcccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceE
Confidence            9999999999999 9999999999997654211      01235679999999999999999999999999999999999


Q ss_pred             EEeCCcc----cce--eeeeEEecCCceeEEEee
Q 037522          487 TVVPGHR----VEQ--KMSLTLFMKYGLMMNVHP  514 (541)
Q Consensus       487 ~~~~~~~----~~~--~~~~~~~~~~~~~v~~~~  514 (541)
                      ++.++..    .+.  .......|+.++.|+++-
T Consensus       451 ~~~~~~~~~~~~~~~~~~~~~~~p~~~i~v~~~~  484 (491)
T 3v8d_A          451 ELIEGQAKCPPLDQSRAGLGILPPLNDIEFKYKF  484 (491)
T ss_dssp             EEC---CCCCCBCGGGTBEEECCBSSCCEEEEEE
T ss_pred             EeCCCCCCCCCCCcccCcCcccCCCCCeEEEEEe
Confidence            9976631    111  123345677788888764


No 25 
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00  E-value=7.4e-62  Score=495.75  Aligned_cols=452  Identities=15%  Similarity=0.130  Sum_probs=306.6

Q ss_pred             CCCCCCCC-CCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCC
Q 037522           25 GSLSGPRV-WPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPK  103 (541)
Q Consensus        25 ~~~pgP~~-~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~  103 (541)
                      +.||||++ +|++||++++..   +.+.++.++++|||++|+   +   ++|+.+++++  +||+++++++.++...+..
T Consensus        18 ~~PPgp~~~~P~iG~~~~~~~---~~~~~~~~l~~kYG~i~~---v---~lg~~~~vvv--~~p~~~~~il~~~~~~~~~   86 (498)
T 3b6h_A           18 GEPPLDLGSIPWLGYALDFGK---DAASFLTRMKEKHGDIFT---I---LVGGRYVTVL--LDPHSYDAVVWEPRTRLDF   86 (498)
T ss_dssp             TCCCEECCSSTTTBTHHHHHH---CHHHHHHHHHHHHCSEEE---E---EETTEEEEEE--CCGGGHHHHHTCCTTTEEC
T ss_pred             CCCCCCCCCCcchhhHHHhcc---CHHHHHHHHHHHcCCeEE---E---EECCeeEEEE--cCHHHHHHHHhCccccCCc
Confidence            46899988 899999999864   478899999999999876   3   6788889999  9999999999876332555


Q ss_pred             ChhHHHHHHhhccCcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHHHHH
Q 037522          104 GPTWQAAFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLLRMT  183 (541)
Q Consensus       104 ~~~~~~~~~~~~g~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  183 (541)
                      .+.....+...+|.+++..+++.|+   +++.+.|+.+.+..+ .+.+.+++.+.+.+........+..+++..++..++
T Consensus        87 ~~~~~~~~~~~~g~~~~~~~~~~~r---r~~~~~~~~~~l~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi  162 (498)
T 3b6h_A           87 HAYAIFLMERIFDVQLPHYSPSDEK---ARMKLTLLHRELQAL-TEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFL  162 (498)
T ss_dssp             CHHHHHHHHHTSCCCCTTCCHHHHH---HHHHTTSSHHHHHHH-HHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHH
T ss_pred             hhhHHHHHHHHcCCCccccCHHHHH---HHHHHhhchHhHHHH-HHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHH
Confidence            5544444455667776667777774   444557888887776 555555552333332222122344689999999999


Q ss_pred             HHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHh-hhccccccccchHHHHHHHHHHHHHH
Q 037522          184 FDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYL-RLGLEVSMGPSLKHIDEYLSDIISTR  262 (541)
Q Consensus       184 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~r  262 (541)
                      +++++.++||.++...+... .......+..+...+..   +...+..+...+ +....++..++.+.    +.+.+.+.
T Consensus       163 ~~~~~~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~p~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~  234 (498)
T 3b6h_A          163 LRAGYLTLYGIEALPRTHES-QAQDRVHSADVFHTFRQ---LDRLLPKLARGSLSVGDKDHMCSVKSR----LWKLLSPA  234 (498)
T ss_dssp             HHHHHHHHHCBSCSSCCHHH-HHHHHHHHHHHHHHHHH---HHHHHHHHHHTCCCHHHHHHHHHHHHH----HHHHTCHH
T ss_pred             HHHHHHhhcCcccccccccc-hhhHHHhhHHHHHHHHH---HHhhHHHHHHHhcCchhhHHHHHHHHH----HHHHHHHH
Confidence            99999999999874321100 00122222222221111   111111111100 00000011111111    11111111


Q ss_pred             HHHHhccccccccccCCCCchhHHHHHhh---cCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHH
Q 037522          263 KLELASRDREQGEAATTTPHDDLLSRFMK---KKESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIAT  339 (541)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~---~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~  339 (541)
                      +  ....          ....|+++.+++   +.+.++++++. .++.+++||++||+.+++|++++|+.||++|++|++
T Consensus       235 ~--~~~~----------~~~~d~l~~ll~~~~~~~~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~  301 (498)
T 3b6h_A          235 R--LARR----------AHRSKWLESYLLHLEEMGVSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRG  301 (498)
T ss_dssp             H--HTTC----------BSCCHHHHHHHHHHHHTTCCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred             H--Hhcc----------ccHHHHHHHHHHHHHhCCCCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHH
Confidence            1  1111          234588888874   23346777777 888899999999999999999999999999999999


Q ss_pred             HHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccc-c---CCcccCCCCEEEEeh
Q 037522          340 EICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVL-P---TGTFVPAGSTVTYSI  415 (541)
Q Consensus       340 Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~-~---~g~~Ip~Gt~v~~~~  415 (541)
                      |+++++++.+.....   ...++.+++.+||||+|||+||||++|+ +...|++.+|.++ +   +||.|||||.|.++.
T Consensus       302 Ei~~v~~~~~~~~~~---~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~  377 (498)
T 3b6h_A          302 ELESILWQAEQPVSQ---TTTLPQKVLDSTPVLDSVLSESLRLTAA-PFITREVVVDLAMPMADGREFNLRRGDRLLLFP  377 (498)
T ss_dssp             HHHHHHHC-------------CCTHHHHSCHHHHHHHHHHHHHHBC-BCEEEEECSCEEEECTTSCEEEECTTCEEEECT
T ss_pred             HHHHHhcccCCCCCc---ccccCHHHHhcCHHHHHHHHHHHhccCC-CcceeeecCCeeeecCCCCeEEeCCCCEEEeCc
Confidence            999998764210000   0136899999999999999999999984 6666656555443 1   689999999999999


Q ss_pred             hh-hccCCCCccCCCCCccCCCCCCCCCCCC------CCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhceEEE
Q 037522          416 YA-IGRMKFIWGEDCLEFKPERWLSQDGNKY------EGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTV  488 (541)
Q Consensus       416 ~~-~h~d~~~~~~~p~~F~p~Rf~~~~~~~~------~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~  488 (541)
                      ++ +||||++| +||++|+||||++.++...      ....+..|+|||+|+|.|||++||+.|++++++.||++|||++
T Consensus       378 ~~~~~~d~~~~-~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~  456 (498)
T 3b6h_A          378 FLSPQRDPEIY-TDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLEL  456 (498)
T ss_dssp             CCCCCTCTTTS-SSTTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEE
T ss_pred             hHhhcCCcccc-CChhhcCcccccCCCcccccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEe
Confidence            99 99999999 9999999999997553210      0113567999999999999999999999999999999999998


Q ss_pred             eCCc--cc--ce--eeeeEEecCCceeEEEeeCCC
Q 037522          489 VPGH--RV--EQ--KMSLTLFMKYGLMMNVHPREL  517 (541)
Q Consensus       489 ~~~~--~~--~~--~~~~~~~~~~~~~v~~~~r~~  517 (541)
                      .++.  ..  +.  ....+..|+.+++|++++|.+
T Consensus       457 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  491 (498)
T 3b6h_A          457 INADVEIPEFDLSRYGFGLMQPEHDVPVRYRIRPH  491 (498)
T ss_dssp             SSTTCCCCCBCGGGTBSSBCCBSSCCEEEEEECCC
T ss_pred             CCCCCCCCCCCccccccccCCCCCCccEEEEeccc
Confidence            7653  11  11  122345677789999998875


No 26 
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00  E-value=1e-61  Score=483.34  Aligned_cols=406  Identities=18%  Similarity=0.166  Sum_probs=297.0

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeecc-CCcceEEEecCChhhH
Q 037522           12 ATVAYLLWFRFMSGSLSGPRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVL-GRKQGLVTVTCDPKNV   90 (541)
Q Consensus        12 ~~~~~~~~~~~~~~~~pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~-~~~~~vvv~~~dp~~i   90 (541)
                      .++++..|.+..++.+|||+++|++|++.....  .+++.++.++ ++||++|+   +   ++ ++.+.+++  +||+.+
T Consensus        13 ~~~~~~~~~~~~~~~~PGP~~~p~lG~~~~~~~--~~p~~~~~~l-~~yGpv~~---~---~~~~~~~~vvv--~~~~~v   81 (436)
T 2cd8_A           13 GLVPRGSHMRRTQQGTTASPPVLDLGALGQDFA--ADPYPTYARL-RAEGPAHR---V---RTPEGDEVWLV--VGYDRA   81 (436)
T ss_dssp             ---------------------CCBHHHHHHHHH--HCCHHHHHHH-HTTCSEEE---E---ECSSCCEEEEE--CSHHHH
T ss_pred             CcCcCCcccchhccCCCCCCccccCCCCCcccc--cChHHHHHHH-HHhCCeee---e---ccCCCCeEEEE--cCHHHH
Confidence            345555666666778999999999999863322  2578888888 99999876   3   44 66788999  999999


Q ss_pred             HHHHhccCCCCCCChhH--HHHH--HhhccCcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHh
Q 037522           91 EHILKARFDNYPKGPTW--QAAF--HDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVA  166 (541)
Q Consensus        91 ~~v~~~~~~~~~~~~~~--~~~~--~~~~g~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~  166 (541)
                      ++++.++  .|.+++..  ....  ....+.+++..+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+ 
T Consensus        82 ~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~-  156 (436)
T 2cd8_A           82 RAVLADP--RFSKDWRNSTTPLTEAEAALNHNMLESDPPRHTRLRKLVAREFTMRRVELL-RPRVQEIV-DGLVDAMLA-  156 (436)
T ss_dssp             HHHHHCT--TEECCGGGCSSCCCTTGGGTCCSGGGCCTTHHHHHHHHHGGGSSHHHHHTT-HHHHHHHH-HHHHHHHHT-
T ss_pred             HHHHcCC--CCcccccccccccccccccccccccccCchHHHHHHHHhHHhhCHHHHHHH-HHHHHHHH-HHHHHHHHh-
Confidence            9999875  57776531  1110  02245778889999999999999999999999986 89999999 888887763 


Q ss_pred             hhcCcceeHHHHH-HHHHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccc
Q 037522          167 QLEAKPVDFQDLL-LRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMG  245 (541)
Q Consensus       167 ~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  245 (541)
                       ..++++|+.+.+ ..+++++++. +||.+...      ...+.+....+..       ..             ..++..
T Consensus       157 -~~~~~vd~~~~~~~~~~~~vi~~-~~G~~~~~------~~~~~~~~~~~~~-------~~-------------~~~~~~  208 (436)
T 2cd8_A          157 -APDGRADLMESLAWPLPITVISE-LLGVPEPD------RAAFRVWTDAFVF-------PD-------------DPAQAQ  208 (436)
T ss_dssp             -CTTSCEEHHHHTTTHHHHHHHHH-HHTCCGGG------HHHHHHHHHHHHS-------CS-------------STTHHH
T ss_pred             -ccCCCcchHHHHHHHHHHHHHHH-HhCCCHHH------HHHHHHHHHHHhc-------cC-------------CHHHHH
Confidence             125689999977 5799999998 68986531      1233332222110       00             012334


Q ss_pred             cchHHHHHHHHHHHHHHHHHHhccccccccccCCCCchhHHHHHhhc----CCCCCHHHHHHHHHHHHHhccccHHHHHH
Q 037522          246 PSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKK----KESYSDEFLQHVALNFILAGRDTSSVAMS  321 (541)
Q Consensus       246 ~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~----~~~l~~~~i~~~~~~~~~ag~~tt~~~l~  321 (541)
                      ++.+.+.+++.+.++++++.               ...|+++.|++.    +..++++++.+++..+++||+|||+.+++
T Consensus       209 ~~~~~~~~~~~~~i~~r~~~---------------~~~d~l~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~  273 (436)
T 2cd8_A          209 TAMAEMSGYLSRLIDSKRGQ---------------DGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIA  273 (436)
T ss_dssp             HHHHHHHHHHHHHHHHHTTS---------------CCCSHHHHHHHHHHHCTTTSCHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcC---------------CCCCHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHH
Confidence            56677888888888776532               235788888852    44699999999999999999999999999


Q ss_pred             HHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccC
Q 037522          322 WFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPT  401 (541)
Q Consensus       322 ~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~  401 (541)
                      |++++|++||++|++|++|+                            .||+|||+|+||++|+++...+|.+.+++.++
T Consensus       274 ~~l~~L~~~P~~~~~l~~e~----------------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~  325 (436)
T 2cd8_A          274 NGMYALLSHPDQLAALRADM----------------------------TLLDGAVEEMLRYEGPVESATYRFPVEPVDLD  325 (436)
T ss_dssp             HHHHHHHTCHHHHHHHHHCG----------------------------GGHHHHHHHHHHHHCSBSSCCCBEESSCEEET
T ss_pred             HHHHHHHcCHHHHHHHhhCh----------------------------hhHHHHHHHHHHhcCcccCceeEEeCCCeEEC
Confidence            99999999999999999873                            16899999999999999954444445555569


Q ss_pred             CcccCCCCEEEEehhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHH
Q 037522          402 GTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVL  481 (541)
Q Consensus       402 g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll  481 (541)
                      ||.||||+.|+++.+++||||++| +||++|+||||-            ..++|||+|+|.|+|++||++|++++++.|+
T Consensus       326 G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~------------~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll  392 (436)
T 2cd8_A          326 GTVIPAGDTVLVVLADAHRTPERF-PDPHRFDIRRDT------------AGHLAFGHGIHFCIGAPLARLEARIAVRALL  392 (436)
T ss_dssp             TEEECTTCCEEECHHHHTTCTTTS-SSTTSCCTTSCC------------TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHH
T ss_pred             CEEECCCCEEEeChHHhCCCcccC-CCccccCCCCCC------------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999 999999999951            2489999999999999999999999999999


Q ss_pred             hhc-eEEEeCC-cccceeeeeEEecCCceeEEEeeCCC
Q 037522          482 LRY-HLTVVPG-HRVEQKMSLTLFMKYGLMMNVHPREL  517 (541)
Q Consensus       482 ~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~r~~  517 (541)
                      ++| ++++..+ .++.+..+....++.+++|++++|++
T Consensus       393 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r~~  430 (436)
T 2cd8_A          393 ERCPDLALDVSPGELVWYPNPMIRGLKALPIRWRRGRE  430 (436)
T ss_dssp             HSCTTCCBCSCGGGCCBCCCTTBCCBSCCEEC------
T ss_pred             HhCCCceecCCCccceeccCcccCCcceeEEEEecCcc
Confidence            999 6998633 34444445555677899999999874


No 27 
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00  E-value=3.4e-60  Score=480.88  Aligned_cols=432  Identities=14%  Similarity=0.135  Sum_probs=295.3

Q ss_pred             cCCCCCCCC-CCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCC
Q 037522           24 SGSLSGPRV-WPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYP  102 (541)
Q Consensus        24 ~~~~pgP~~-~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~  102 (541)
                      .+.||||++ +|++||++++..   +++.++.++++|||++|+   +   ++|+.+++++  +||+.+++++.++ ..++
T Consensus        17 ~~~pPgp~~~~P~iG~~~~~~~---~~~~~~~~l~~~yG~v~~---~---~~g~~~~vvv--~~~~~~~~il~~~-~~~~   84 (475)
T 3b98_A           17 RNEPPLDKGMIPWLGHALEFGK---DAAKFLTRMKEKHGDIFT---V---RAAGLYITVL--LDSNCYDAVLSDV-ASLD   84 (475)
T ss_dssp             TTCCCEECCSSTTTBTHHHHHH---CHHHHHHHHHHHHCSEEE---E---EETTEEEEEE--CCTTTHHHHHTCT-TTEE
T ss_pred             CCCCCCCCCCcchHHhHHHHhh---CHHHHHHHHHHHhCCeEE---E---EECCceEEEE--eCHHHHHHHHcCc-ccCC
Confidence            347899997 999999999864   478899999999999876   3   5678888999  9999999999876 3355


Q ss_pred             CChhHHHHHHhhccCcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHh--hhcCcceeHHHHHH
Q 037522          103 KGPTWQAAFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVA--QLEAKPVDFQDLLL  180 (541)
Q Consensus       103 ~~~~~~~~~~~~~g~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~--~~~~~~vdl~~~~~  180 (541)
                      .++.....+...+|.+++..+++.|   |+++.+.|+.+.+..+ .+.+.+++ ..+++.+...  ......+++..++.
T Consensus        85 ~~~~~~~~~~~~~g~~~~~~~~~~~---R~~~~~~f~~~~l~~~-~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~  159 (475)
T 3b98_A           85 QTSYAQVLMKRIFNMILPSHNPESE---KKRAEMHFQGASLTQL-SNSMQNNL-RLLMTPSEMGLKTSEWKKDGLFNLCY  159 (475)
T ss_dssp             SHHHHHHHHHHTTCCCCTTCCHHHH---HHHHHHHTSHHHHHHH-HHHHHHHH-HHHSSTTTTTCSSCSCEEEEHHHHHH
T ss_pred             chHHHHHHHHHHhCCCCCCCChHHH---HHHHHHHcChhhHHHH-HHHHHHHH-HHHHhhcccccCCCCceeehHHHHHH
Confidence            4443333444556777766777765   4666678999888886 78888877 5554443221  11234688999999


Q ss_pred             HHHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHH
Q 037522          181 RMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIIS  260 (541)
Q Consensus       181 ~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  260 (541)
                      .+++++++...||.+...      ...+......+....   ..+|.    +..  . .......+...+..+.+.+.+.
T Consensus       160 ~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~---~~~p~----l~~--~-~~~~~~~~~~~~~~~~~~~~~~  223 (475)
T 3b98_A          160 SLLFKTGYLTVFGAENNN------SAALTQIYEEFRRFD---KLLPK----LAR--T-TVNKEEKQIASAAREKLWKWLT  223 (475)
T ss_dssp             HHHHHHHHHHHHCCTTSC------HHHHHHHHHHHHHHH---HHHHH----HHT--T-CCCHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHhhhheeCCcccc------chhcHHHHHHHHHHH---hhhHH----HHH--H-hcChhhhHHHHHHHHHHHHHHH
Confidence            999999999999954210      122222222211110   01110    100  0 0000000011111111111111


Q ss_pred             HHHHHHhccccccccccCCCCchhHHHHHhh---cCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHH
Q 037522          261 TRKLELASRDREQGEAATTTPHDDLLSRFMK---KKESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKI  337 (541)
Q Consensus       261 ~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~---~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l  337 (541)
                      +   .....      .   ....|+++.+++   +.+.++++++. +++.+++||+|||+.+++|++++|+.||++|++|
T Consensus       224 ~---~~~~~------~---~~~~d~l~~ll~~~~~~~~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l  290 (475)
T 3b98_A          224 P---SGLDR------K---PREQSWLGSYVKQLQDEGIDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAV  290 (475)
T ss_dssp             C---TTSCC------C---CCTTSHHHHHHHHHHHTTCCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHH
T ss_pred             H---HHhhc------c---ccccHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHH
Confidence            0   00000      0   234688888874   23347888888 9999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCcccc-----CCcccCCCCEEE
Q 037522          338 ATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLP-----TGTFVPAGSTVT  412 (541)
Q Consensus       338 r~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~-----~g~~Ip~Gt~v~  412 (541)
                      |+|++.  +.           ..++.+++.+||||+|||+|+||++|+ +...|.+.+ ++.+     +||.||||+.|+
T Consensus       291 ~~Ei~~--~~-----------~~~~~~~~~~lpyl~a~i~E~lRl~p~-~~~~R~~~~-d~~l~~~~g~g~~Ip~Gt~V~  355 (475)
T 3b98_A          291 REEIQG--GK-----------HLRLEERQKNTPVFDSVLWETLRLTAA-ALITRDVTQ-DKKICLSNGQEYHLRRGDRLC  355 (475)
T ss_dssp             HHHHC-------------------------CCHHHHHHHHHHHHHHEE-ECEEEEECS-CEEEECTTSCEEEECTTCEEE
T ss_pred             HHHHhc--CC-----------CCCCHHHHhcCHHHHHHHHHHHhcCCc-cceeEEecC-CeEeecCCCCeEEECCCCEEE
Confidence            999982  21           335889999999999999999999986 665555554 4444     789999999999


Q ss_pred             Eehhh-hccCCCCccCCCCCccCCCCCCCCCCCC------CCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhce
Q 037522          413 YSIYA-IGRMKFIWGEDCLEFKPERWLSQDGNKY------EGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYH  485 (541)
Q Consensus       413 ~~~~~-~h~d~~~~~~~p~~F~p~Rf~~~~~~~~------~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~  485 (541)
                      ++.++ +||||++| +||++||||||++.++...      ....+..|+|||+|+|.|+|++||+.|++++++.||++|+
T Consensus       356 ~~~~~~~~rdp~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~  434 (475)
T 3b98_A          356 VFPFISPQMDPQIH-QQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFD  434 (475)
T ss_dssp             ECTCCCCCTCTTTS-SSTTSCCTTTTBCTTSCBCCCCBSSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEE
T ss_pred             eCcHHHhcCChhhc-CCcccCCcchhcCCCCCccccccccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEE
Confidence            99999 99999999 9999999999997653210      0123567999999999999999999999999999999999


Q ss_pred             EEEeCCcc--c--ce--eeeeEEecCCceeEEEeeCCC
Q 037522          486 LTVVPGHR--V--EQ--KMSLTLFMKYGLMMNVHPREL  517 (541)
Q Consensus       486 ~~~~~~~~--~--~~--~~~~~~~~~~~~~v~~~~r~~  517 (541)
                      |++.++..  .  ..  ....+..|+.+++|++++|+.
T Consensus       435 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~R~~  472 (475)
T 3b98_A          435 VELCDKNATVPLVDPSRYGFGILQPAGDLEIRYRIRFH  472 (475)
T ss_dssp             EEESSTTCCCCCBCGGGTBEEECCBSSCCEEEEEEC--
T ss_pred             EEECCCCCCCCCCCcccccccccCCCCCceEEEEeccc
Confidence            99876531  1  11  122345677799999999964


No 28 
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00  E-value=5.7e-61  Score=471.92  Aligned_cols=387  Identities=23%  Similarity=0.303  Sum_probs=296.9

Q ss_pred             CCCCCCCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChhH
Q 037522           28 SGPRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTW  107 (541)
Q Consensus        28 pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~  107 (541)
                      ++++.+|++||++++..   +++.++.+++++||++|+       ++++.+.+++  +||+.+++++.++  .|++++..
T Consensus         2 ~~~~~~p~iGnl~~~~~---~p~~~~~~l~~~yGpv~~-------~~g~~~~vvv--~~~~~i~~il~~~--~f~~~~~~   67 (389)
T 1n97_A            2 KRLSLREAWPYLKDLQQ---DPLAVLLAWGRAHPRLFL-------PLPRFPLALI--FDPEGVEGALLAE--GTTKATFQ   67 (389)
T ss_dssp             EECCHHHHHHHHHHHHH---CHHHHHHHHHHHCSEEEE-------CCTTCCEEEE--CSHHHHHHHHHCT--TEECCSHH
T ss_pred             cccccccccccHHHHhh---ChHHHHHHHHHHcCCeeE-------ecCCccEEEE--CCHHHHHHHHhcC--CCCCChhH
Confidence            34667899999998854   478889999999999733       5677889999  9999999999886  78887623


Q ss_pred             HHHHHhhccCcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHHHHHHHHH
Q 037522          108 QAAFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLLRMTFDNI  187 (541)
Q Consensus       108 ~~~~~~~~g~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~  187 (541)
                      ...+..+.|.+++..+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.     ++++|+.+++..++++++
T Consensus        68 ~~~~~~~~g~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~-----~~~~dl~~~~~~~~~~vi  140 (389)
T 1n97_A           68 YRALSRLTGRGLLTDWGESWKEARKALKDPFLPKNVRGY-REAMEEEA-RAFFGEWR-----GEERDLDHEMLALSLRLL  140 (389)
T ss_dssp             HHHHHHHHCSSTTTCCHHHHHHHHHHHCGGGSHHHHHTT-HHHHHHHH-HHHHHTCC-----SCCEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCccccCCcHHHHHHHHHhCcccCHHHHHHH-HHHHHHHH-HHHHHHcc-----CCcCcHHHHHHHHHHHHH
Confidence            333444567888889999999999999999999999986 89999888 77766654     468999999999999999


Q ss_pred             HhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHh
Q 037522          188 CGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELA  267 (541)
Q Consensus       188 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~  267 (541)
                      +.++||.++..        ++.+.+..+........ .+ .   + .+++....++..++.+.+.+++.+.++       
T Consensus       141 ~~~~fG~~~~~--------~~~~~~~~~~~~~~~~~-~~-~---~-~~~p~~~~~~~~~~~~~~~~~~~~~i~-------  199 (389)
T 1n97_A          141 GRALFGKPLSP--------SLAEHALKALDRIMAQT-RS-P---L-ALLDLAAEARFRKDRGALYREAEALIV-------  199 (389)
T ss_dssp             HHHHHSSCCCH--------HHHHHHHHHHHHHHHHH-HC-G---G-GGGCHHHHHHHHHHHHHHHHHHGGGTT-------
T ss_pred             HHHHcCCcchH--------HHHHHHHHHHHHHHHHH-hh-H---H-HhcCCchhHHHHHHHHHHHHHHHHHHH-------
Confidence            99999998751        34444443333221100 00 0   0 111111111111122222222221111       


Q ss_pred             ccccccccccCCCCchhHHHHHhhcCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhh
Q 037522          268 SRDREQGEAATTTPHDDLLSRFMKKKESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLE  347 (541)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~l~~ll~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~  347 (541)
                                   ..      ++   +.++++++.+++..+++||+|||+.+++|++++|+.||++|+++++|++++   
T Consensus       200 -------------~r------ll---~~l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~---  254 (389)
T 1n97_A          200 -------------HP------PL---SHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAA---  254 (389)
T ss_dssp             -------------ST------TG---GGSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHH---
T ss_pred             -------------HH------hc---ccCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHH---
Confidence                         01      22   248999999999999999999999999999999999999999999999875   


Q ss_pred             hcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccC
Q 037522          348 TRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGE  427 (541)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~  427 (541)
                                               .|+|+|+||++|+++...|.+ .+++.++||.||||+.|.++.+++|||  +| +
T Consensus       255 -------------------------~a~i~E~lRl~p~~~~~~R~~-~~d~~l~g~~Ip~Gt~V~~~~~~~~rd--~~-~  305 (389)
T 1n97_A          255 -------------------------LAAFQEALRLYPPAWILTRRL-ERPLLLGEDRLPPGTTLVLSPYVTQRL--HF-P  305 (389)
T ss_dssp             -------------------------HHHHHHHHHHSCSSCCEEEEE-SSCEEETTEEECTTCEEEECHHHHHHH--SS-T
T ss_pred             -------------------------HHHHHHHHhcCCCccccceee-CCCceECCEEeCCCCEEEECHHHHhhh--cC-C
Confidence                                     199999999999999875555 555556999999999999999999999  99 9


Q ss_pred             CCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhceEEEeCCcccceeeeeEEecCCc
Q 037522          428 DCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYHLTVVPGHRVEQKMSLTLFMKYG  507 (541)
Q Consensus       428 ~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  507 (541)
                      ||++||||||+++..     ..+..++|||+|+|.|+|++||+.|++++++.|+++|++++.++...  ..+.+..|..+
T Consensus       306 dp~~F~PeR~l~~~~-----~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~--~~~~~~~p~~~  378 (389)
T 1n97_A          306 DGEAFRPERFLEERG-----TPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPRV--LAQVTLRPEGG  378 (389)
T ss_dssp             TTTSCCTTHHHHSCC-----CCBTTBCTTCCSTTCCTTHHHHHHHHHHHHHHHHTTCBCCCCCCCCE--EESSSEEETTC
T ss_pred             CccccCCccCCCCCC-----CCCCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHhceEEeCCCCcc--cceEEeeeCCC
Confidence            999999999986421     23557999999999999999999999999999999999998766543  44667788889


Q ss_pred             eeEEEeeCCC
Q 037522          508 LMMNVHPREL  517 (541)
Q Consensus       508 ~~v~~~~r~~  517 (541)
                      ++|++++|.+
T Consensus       379 ~~v~~~~~~~  388 (389)
T 1n97_A          379 LPARPREEVR  388 (389)
T ss_dssp             CEECCBC---
T ss_pred             ceEEEeeccc
Confidence            9999998753


No 29 
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00  E-value=3.8e-59  Score=463.84  Aligned_cols=399  Identities=14%  Similarity=0.133  Sum_probs=307.1

Q ss_pred             CCCCcCCChhhhhccchhhHHHHHHHHHHcC-CcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChh-HH
Q 037522           31 RVWPLLGSLPGLFQNSKRLHDWISDNLRACG-GTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPT-WQ  108 (541)
Q Consensus        31 ~~~P~lG~~~~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~-~~  108 (541)
                      |+.|++||++.+..   +++.++.++++||| ++|+   +   .+++.+.+++  ++|+.++.++ +. ..|.+.+. ..
T Consensus         6 Pg~P~lG~~~~~~~---~p~~~~~~l~~~yg~pv~~---~---~~~g~~~v~v--~~~~~~~~l~-~~-~~~~~~~~~~~   72 (417)
T 1izo_A            6 PHDKSLDNSLTLLK---EGYLFIKNRTERYNSDLFQ---A---RLLGKNFICM--TGAEAAKVFY-DT-DRFQRQNALPK   72 (417)
T ss_dssp             CBCCCTTHHHHHHH---HGGGHHHHHHHHTTSSEEE---E---EETTEEEEEE--CSHHHHHHHT-CT-TTEECTTCSCH
T ss_pred             CCCCccchHHHHhh---CcHHHHHHHHHHhCCCeEE---e---ecCCccEEEE--CCHHHHHHHh-cc-ccccccccccc
Confidence            34599999999875   57889999999998 7866   3   3456788999  9999998554 43 45655432 22


Q ss_pred             HHHHhhcc-CcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHHHHHHHHH
Q 037522          109 AAFHDLLG-DGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLLRMTFDNI  187 (541)
Q Consensus       109 ~~~~~~~g-~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~  187 (541)
                      .....++| .+++..+|+.|+++|+++++.|+++.++.+ .+.+.+.+ +.+++.+.+    ++++|+.+++..++++++
T Consensus        73 ~~~~~~~g~~~l~~~dg~~h~~~R~~~~~~f~~~~l~~~-~~~i~~~~-~~l~~~l~~----~~~~dl~~~~~~~~~~vi  146 (417)
T 1izo_A           73 RVQKSLFGVNAIQGMDGSAHIHRKMLFLSLMTPPHQKRL-AELMTEEW-KAAVTRWEK----ADEVVLFEEAKEILCRVA  146 (417)
T ss_dssp             HHHTTTTCTTCGGGCCHHHHHHHHHHHHHTSSHHHHHHH-HHHHHHHH-HHHHHHHTT----SSEEEHHHHHHHHHHHHH
T ss_pred             chhhhhccccceeecCChHHHHHHHHhhhhcCHHHHHHH-HHHHHHHH-HHHHHHHhc----CCCeeHHHHHHHHHHHHH
Confidence            33344566 478889999999999999999999999997 89999988 777776643    468999999999999999


Q ss_pred             HhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhh-chHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHH
Q 037522          188 CGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFL-LPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLEL  266 (541)
Q Consensus       188 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~  266 (541)
                      +.+ ||.+.+..       ++.+....+......... .|.             ..+..++.+.+.+++.++++++++..
T Consensus       147 ~~~-~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~i~~r~~~~  205 (417)
T 1izo_A          147 CYW-AGVPLKET-------EVKERADDFIDMVDAFGAVGPR-------------HWKGRRARPRAEEWIEVMIEDARAGL  205 (417)
T ss_dssp             HHH-HTCCCCTT-------THHHHHHHHHHHHHHTTCCSHH-------------HHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             HHH-cCCCCCch-------HHHHHHHHHHHHHhhcccCCcc-------------chhHHHHHHHHHHHHHHHHHHHHhhc
Confidence            998 59876531       122222222221111110 110             11223466788888999988877542


Q ss_pred             hccccccccccCCCCchhHHHHHhhc----CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHH
Q 037522          267 ASRDREQGEAATTTPHDDLLSRFMKK----KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEIC  342 (541)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~l~~ll~~----~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~  342 (541)
                      ..           ....|+++.|++.    +..++++++...+..+ +||++||+.+++|++++|++||++|++|++|  
T Consensus       206 ~~-----------~~~~d~l~~ll~~~~~~g~~l~~~~~~~~~~~~-~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E--  271 (417)
T 1izo_A          206 LK-----------TTSGTALHEMAFHTQEDGSQLDSRMAAIELINV-LRPIVAISYFLVFSALALHEHPKYKEWLRSG--  271 (417)
T ss_dssp             SC-----------CCTTSHHHHHHHCBCTTSCBCCHHHHHHHHHHH-HHHHHTHHHHHHHHHHHHHHSTHHHHHHHTC--
T ss_pred             cC-----------CCcCCHHHHHHHhccccCCCCCHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhhCHHHHHHHHhc--
Confidence            11           1346899988863    2347888777776655 4999999999999999999999999999976  


Q ss_pred             HHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCC
Q 037522          343 TVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMK  422 (541)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~  422 (541)
                                               ++|||+++|+|+||++|+++...|++.+| +.++||.||||+.|.++.+++||||
T Consensus       272 -------------------------~~~~l~a~i~E~lRl~p~~~~~~R~~~~d-~~l~g~~ip~G~~v~~~~~~~~rdp  325 (417)
T 1izo_A          272 -------------------------NSREREMFVQEVRRYYPFGPFLGALVKKD-FVWNNCEFKKGTSVLLDLYGTNHDP  325 (417)
T ss_dssp             -------------------------CHHHHHHHHHHHHHHSCCCCEEEEEECSC-EEETTEEECTTCEEEEEHHHHHTCT
T ss_pred             -------------------------CCHHHHHHHHHHhhcCCcccccceeecCC-eeECCEEECCCCEEEecHHHhhcCc
Confidence                                     25799999999999999999866666555 4459999999999999999999999


Q ss_pred             CCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCC----CcccchHHHHHHHHHHHHHHHHhhceEEEeCCcccceee
Q 037522          423 FIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAG----PRICLGKDLAYLQMKSIAAEVLLRYHLTVVPGHRVEQKM  498 (541)
Q Consensus       423 ~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G----~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~  498 (541)
                      ++| +||++|||+||++.++      .+..|+|||+|    +|.|+|++||+.|++++++.|+++|+|++.++.......
T Consensus       326 ~~~-~dp~~F~P~R~~~~~~------~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~  398 (417)
T 1izo_A          326 RLW-DHPDEFRPERFAEREE------NLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQSLHYSLA  398 (417)
T ss_dssp             TTS-SSTTSCCGGGGTTCCC------CSSSCCTTCSSCTTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSCCCCCCSS
T ss_pred             ccc-CCccccChhhcCCCCC------CCcceeCCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCeEEeCCCCcCcccc
Confidence            999 9999999999997542      45679999999    599999999999999999999999999986643211222


Q ss_pred             eeEEecCCceeEEEeeCC
Q 037522          499 SLTLFMKYGLMMNVHPRE  516 (541)
Q Consensus       499 ~~~~~~~~~~~v~~~~r~  516 (541)
                      .++..|..+++|++++|+
T Consensus       399 ~~~~~p~~~~~~~~~~r~  416 (417)
T 1izo_A          399 RMPSLPESGFVMSGIRRK  416 (417)
T ss_dssp             SSSCCCTTCCEEEEEEEC
T ss_pred             cCCCCCCCCceEeeeeCC
Confidence            456678889999999986


No 30 
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00  E-value=3.9e-58  Score=456.29  Aligned_cols=399  Identities=16%  Similarity=0.158  Sum_probs=304.8

Q ss_pred             CCCCCCCCcCCChhhhhccchhhHHHHHHHHHHc-CCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCCh
Q 037522           27 LSGPRVWPLLGSLPGLFQNSKRLHDWISDNLRAC-GGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGP  105 (541)
Q Consensus        27 ~pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~ky-G~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~  105 (541)
                      ||||   |++||++.+..   +++.++.++++|| |++|+   +   .+++.+.+++  ++|+.++ ++.+. ..|++.+
T Consensus         4 pPg~---P~iG~~~~~~~---~p~~~~~~l~~~y~gpv~~---~---~~~g~~~~vv--~~~~~~~-~l~~~-~~f~~~~   67 (415)
T 3awm_A            4 TPHT---KGPDETLSLLA---DPYRFISRQCQRLGANAFE---S---RFLLKKTNCL--KGAKAAE-IFYDT-TRFEREG   67 (415)
T ss_dssp             --------CCCCHHHHHH---STTTHHHHHHHHHTSSEEE---E---EETTEEEEEE--ESHHHHH-HHTCT-TTEECTT
T ss_pred             CCCC---CccchHHHHHh---ChHHHHHHHHHHhCCCeEE---E---ecCCCcEEEE--eCHHHHH-HHhcc-ccccccc
Confidence            5665   89999999875   4788899999999 78866   3   3456678888  9999986 67665 5676654


Q ss_pred             hH-HHHHHhhcc-CcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHHHHH
Q 037522          106 TW-QAAFHDLLG-DGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLLRMT  183 (541)
Q Consensus       106 ~~-~~~~~~~~g-~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  183 (541)
                      .+ ......++| .+++..+|+.|+++|+++++.|+++.++.+ .+.+.+.+ +.+++.+.+    ++++|+.+.+..++
T Consensus        68 ~~~~~~~~~~~g~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~~~~----~~~vdl~~~~~~~~  141 (415)
T 3awm_A           68 AMPVAIQKTLLGQGGVQGLDGETHRHRKQMFMGLMTPERVRAL-AQLFEAEW-RRAVPGWTR----KGEIVFYDELHEPL  141 (415)
T ss_dssp             CSCHHHHTTTSCSSSGGGCCHHHHHHHHHHHHTTCCHHHHHHH-HHHHHHHH-HHHHHHHHH----HSEEEHHHHHHHHH
T ss_pred             ccchhhhhhccCCcceeecCcHHHHHHHHHHHHhcCHHHHHHH-HHHHHHHH-HHHHHhhcc----CCcEeHHHHHHHHH
Confidence            32 223334566 578889999999999999999999999987 89999999 778777754    35799999999999


Q ss_pred             HHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHH
Q 037522          184 FDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRK  263 (541)
Q Consensus       184 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~  263 (541)
                      +++++.+ ||.+...       .++.+....+............            ...+..++.+.+.+++.+++++++
T Consensus       142 ~~vi~~~-~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~i~~r~  201 (415)
T 3awm_A          142 TRAVCAW-AGVPLPD-------DEAGNRAGELRALFDAAGSASP------------RHLWSRLARRRVDAWAKRIIEGIR  201 (415)
T ss_dssp             HHHHHHH-HTCCCCG-------GGHHHHHHHHHHHHHSTTCSSH------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHH-cCCCCCc-------chHHHHHHHHHHHHHHhcccCc------------hHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999 7987653       1222222222222111100000            012234566788889999998887


Q ss_pred             HHHhccccccccccCCCCchhHHHHHhhc----CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHH
Q 037522          264 LELASRDREQGEAATTTPHDDLLSRFMKK----KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIAT  339 (541)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~----~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~  339 (541)
                      +....           ....|+++.|++.    +..++++++...+..++ ||++||+.+++|++++|++||++|++|++
T Consensus       202 ~~~~~-----------~~~~d~l~~ll~~~~~~g~~~~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~  269 (415)
T 3awm_A          202 AGSIG-----------SGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVL-RPTVAIAVYITFVAHALQTCSGIRAALVQ  269 (415)
T ss_dssp             HTSSC-----------CCTTSHHHHHHHCBCTTSCBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTTHHHHHHH
T ss_pred             Hhhhc-----------CCCCCHHHHHHhhhhccCCCCCHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhChHHHHHHHH
Confidence            64211           2346899998863    23488888887776554 99999999999999999999999999997


Q ss_pred             HHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhc
Q 037522          340 EICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIG  419 (541)
Q Consensus       340 Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h  419 (541)
                      |                            +|||+++|+|+||++|+++...|++.+ ++.++|+.||||+.|.++.+++|
T Consensus       270 e----------------------------~~~l~a~i~E~lRl~p~~~~~~R~~~~-d~~l~G~~ip~G~~V~~~~~~~~  320 (415)
T 3awm_A          270 Q----------------------------PDYAELFVQEVRRFYPFFPAVVARASQ-DFEWEGMAFPEGRQVVLDLYGSN  320 (415)
T ss_dssp             C----------------------------TTHHHHHHHHHHHHSCCSCEEEEEESS-CEEETTEEECTTCEEEEEHHHHH
T ss_pred             H----------------------------HHHHHHHHHHHhhcCCCccccceeecC-CeEECCEEECCCCEEEeCchhhc
Confidence            5                            369999999999999999986666654 45559999999999999999999


Q ss_pred             cCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCC----CcccchHHHHHHHHHHHHHHHHhhceEEEeCCcccc
Q 037522          420 RMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAG----PRICLGKDLAYLQMKSIAAEVLLRYHLTVVPGHRVE  495 (541)
Q Consensus       420 ~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G----~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~  495 (541)
                      |||++| +||++|||+||++.+.      .+..|+|||+|    +|.|+|++||+.|++++++.|+++|+|++.++....
T Consensus       321 rdp~~~-~dp~~F~P~R~~~~~~------~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~  393 (415)
T 3awm_A          321 HDAATW-ADPQEFRPERFRAWDE------DSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSI  393 (415)
T ss_dssp             TCHHHH-SSTTSCCGGGGGGCCC------CSSSCCTTCCSCTTTSCCCTTHHHHHHHHHHHHHHHHHTCEEECCSCCCCB
T ss_pred             CCcccc-CCccccChhhcCCCCC------CCCCccCCCCCCCCCCCcCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCc
Confidence            999999 9999999999997542      34579999999    599999999999999999999999999986543222


Q ss_pred             eeeeeEEecCCceeEEEeeC
Q 037522          496 QKMSLTLFMKYGLMMNVHPR  515 (541)
Q Consensus       496 ~~~~~~~~~~~~~~v~~~~r  515 (541)
                      ....++..|+.++++++++.
T Consensus       394 ~~~~~~~~p~~~~~~~~~~~  413 (415)
T 3awm_A          394 DFARLPALPKSGFVMRNVHI  413 (415)
T ss_dssp             CTTSSSCCBTTCCEEEEEES
T ss_pred             CcCCCccccCCCceEEEEeC
Confidence            22345667888999999864


No 31 
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00  E-value=1.7e-57  Score=449.99  Aligned_cols=370  Identities=14%  Similarity=0.171  Sum_probs=284.9

Q ss_pred             CCCCCCCCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccC-CCCCCCh
Q 037522           27 LSGPRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARF-DNYPKGP  105 (541)
Q Consensus        27 ~pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~-~~~~~~~  105 (541)
                      ||||+++|++|++.+      +++..+.++. +||++|+   +  ...++...++|  ++++.+++++.++. ..+..++
T Consensus         3 pPGp~~~P~~g~~~~------~p~~~~~~l~-~~Gpv~~---~--~~~~g~~~~vv--~~~~~v~~vl~~~~~~~~~~r~   68 (404)
T 1jfb_A            3 ASGAPSFPFSRASGP------EPPAEFAKLR-ATNPVSQ---V--KLFDGSLAWLV--TKHKDVCFVATSEKLSKVRTRQ   68 (404)
T ss_dssp             ---CCBSSCCCSSTT------SCCTHHHHHH-HHCSEEE---E--ECTTSCEEEEE--CSHHHHHHHHHCTTEECCTTST
T ss_pred             CCCCCCCCCCCCcCC------CccHHHHHHH-HhCCeee---e--ecCCCCceEEE--ecHHHHHHHHcCCccccccccc
Confidence            899999999999875      3566666664 6999866   2  12235566778  99999999998752 1222222


Q ss_pred             hH----HHHHHhhcc-CcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHH
Q 037522          106 TW----QAAFHDLLG-DGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLL  180 (541)
Q Consensus       106 ~~----~~~~~~~~g-~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~  180 (541)
                      .+    ........+ .+++..+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+....++++|+...+.
T Consensus        69 ~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~~~~~~~~~d~~~~~~  146 (404)
T 1jfb_A           69 GFPELSASGKQAAKAKPTFVDMDPPEHMHQRSMVEPTFTPEAVKNL-QPYIQRTV-DDLLEQMKQKGCANGPVDLVKEFA  146 (404)
T ss_dssp             TCCCCSHHHHHHTTSCCCGGGCCTTHHHHHHTTTGGGGSHHHHHHH-HHHHHHHH-HHHHHHHHHHCSTTSCEEHHHHTT
T ss_pred             CCccccccccchhcccCcccccCchhHHHHHHHhhhhcCHHHHHHH-HHHHHHHH-HHHHHHHHhcCCCCCCccHHHHHH
Confidence            11    111111223 467888999999999999999999999986 99999999 888888876443456799999999


Q ss_pred             HHHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHH
Q 037522          181 RMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIIS  260 (541)
Q Consensus       181 ~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  260 (541)
                      ..+.++++..+||.+...       .++.....   .....  ..             ...++..++.+.+.+++.+.++
T Consensus       147 ~~~~~~i~~~~~G~~~~~-------~~~~~~~~---~~~~~--~~-------------~~~~~~~~~~~~~~~~~~~~i~  201 (404)
T 1jfb_A          147 LPVPSYIIYTLLGVPFND-------LEYLTQQN---AIRTN--GS-------------STAREASAANQELLDYLAILVE  201 (404)
T ss_dssp             THHHHHHHHHHHTCCGGG-------HHHHHHHH---HHHHC--TT-------------SCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCHHH-------HHHHHHHH---HHHhc--cC-------------cchHHHHHHHHHHHHHHHHHHH
Confidence            999999999999987531       22222111   11100  00             0112334456778888888888


Q ss_pred             HHHHHHhccccccccccCCCCchhHHHHHhhc---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHH
Q 037522          261 TRKLELASRDREQGEAATTTPHDDLLSRFMKK---KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKI  337 (541)
Q Consensus       261 ~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l  337 (541)
                      ++++.               ...|+++.|++.   +..++++++.+++..+++||+|||+.+++|++++|++||++|++|
T Consensus       202 ~r~~~---------------~~~d~l~~ll~~~~~~~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l  266 (404)
T 1jfb_A          202 QRLVE---------------PKDDIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQL  266 (404)
T ss_dssp             HHHHS---------------CCSSHHHHHHHHTTTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred             HHHhC---------------CCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHH
Confidence            77643               245899988842   345899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhh
Q 037522          338 ATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYA  417 (541)
Q Consensus       338 r~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~  417 (541)
                      +++                            .+||+|||+|+||++|+++...+|.+.+++.++||.|||||.|.++.++
T Consensus       267 ~~~----------------------------~~yl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~  318 (404)
T 1jfb_A          267 KAN----------------------------PSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQS  318 (404)
T ss_dssp             HHC----------------------------GGGHHHHHHHHHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHH
T ss_pred             HhC----------------------------hHhHHHHHHHHHhhCCCccccceeeeCCCeeECCEEECCCCEEEeCHHh
Confidence            872                            2599999999999999999655555555666699999999999999999


Q ss_pred             hccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCC
Q 037522          418 IGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPG  491 (541)
Q Consensus       418 ~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~  491 (541)
                      +||||++| +||++|+||||++..          .++|||+|+|.|+|++||++|++++++.|+++| ++++.++
T Consensus       319 ~~rdp~~~-~dP~~F~PeRf~~~~----------~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~  382 (404)
T 1jfb_A          319 ANRDEEVF-ENPDEFNMNRKWPPQ----------DPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVP  382 (404)
T ss_dssp             HTTCTTTS-SSTTSCCTTCCCCSS----------CCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred             hCCCchhC-CChhhcCCCCCCCCC----------CCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHCCCceecCC
Confidence            99999999 999999999997422          389999999999999999999999999999999 7998653


No 32 
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00  E-value=2.7e-58  Score=456.07  Aligned_cols=397  Identities=19%  Similarity=0.216  Sum_probs=297.4

Q ss_pred             HHHHHHH--HHhcCCCCCCCCCCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHH
Q 037522           14 VAYLLWF--RFMSGSLSGPRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVE   91 (541)
Q Consensus        14 ~~~~~~~--~~~~~~~pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~   91 (541)
                      +++++|+  .++.+.+|||+.          .   .+++.++.++++ ||++         +.++.+.+++  +|++.++
T Consensus         6 ~~~~iyr~~~~pl~~~PGp~~----------~---~~p~~~~~~l~~-~gpv---------~~~~~~~~vv--~~~~~v~   60 (411)
T 2jjn_A            6 ETTCCARRTLTTIDEVPGMAD----------E---TALLDWLGTMRE-KQPV---------WQDRYGVWHV--FRHADVQ   60 (411)
T ss_dssp             -----------CCCSCCCSSC----------H---HHHHHHHHHHHH-HCSE---------EECTTSCEEE--CSHHHHH
T ss_pred             HhHHhhhcccCCCCCCCCccc----------c---cChHHHHHHHHH-hCCc---------ccCCCCeEEE--CCHHHHH
Confidence            3344443  344557777761          1   257778888865 9996         2345678888  9999999


Q ss_pred             HHHhccCCCCCCChhHHHHHHh--hccCcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhc
Q 037522           92 HILKARFDNYPKGPTWQAAFHD--LLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLE  169 (541)
Q Consensus        92 ~v~~~~~~~~~~~~~~~~~~~~--~~g~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~  169 (541)
                      +++.++ ..|++++...  +..  ..+.+++..+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.      .
T Consensus        61 ~vl~~~-~~f~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~------~  129 (411)
T 2jjn_A           61 TVLRDT-ATFSSDPTRV--IEGASPTPGMIHEIDPPEHRALRKVVSSAFTPRTISDL-EPRIRDVT-RSLLAD------A  129 (411)
T ss_dssp             HHHHCT-TTEESCGGGG--STTCCCCTTCGGGCCTTHHHHHHHHHHHHSCHHHHHTT-HHHHHHHH-HHHHHT------S
T ss_pred             HHHcCc-ccccCccccc--CCcccccccccccCCchHHHHHHHHhhhhcCHHHHHHH-HHHHHHHH-HHHHhc------C
Confidence            999876 5788876431  112  234678888999999999999999999999886 89999888 666655      2


Q ss_pred             CcceeHHHH-HHHHHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccch
Q 037522          170 AKPVDFQDL-LLRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSL  248 (541)
Q Consensus       170 ~~~vdl~~~-~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  248 (541)
                      ++++|+... ...+++++++.+ ||.+....+      .+.+....+...     ..|.+..+       ...++..++.
T Consensus       130 ~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~~------~~~~~~~~~~~~-----~~~~~~~p-------~~~~~~~~~~  190 (411)
T 2jjn_A          130 GESFDLVDVLAFPLPVTIVAEL-LGLPPMDHE------QFGDWSGALVDI-----QMDDPTDP-------ALAERIADVL  190 (411)
T ss_dssp             CSEEEHHHHTTTHHHHHHHHHH-HTCCSCCCS------TTCCHHHHHHHS-----CCSCTTCH-------HHHHHHHHHH
T ss_pred             CCceeHHHHHHHHHHHHHHHHH-cCCCHHHHH------HHHHHHHHHHhc-----cCccccch-------HHHHHHHHHH
Confidence            457999955 568999999998 999865321      122222222211     11111000       0122344566


Q ss_pred             HHHHHHHHHHHHHHHHHHhccccccccccCCCCchhHHHHHhhc---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHH
Q 037522          249 KHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKK---KESYSDEFLQHVALNFILAGRDTSSVAMSWFFW  325 (541)
Q Consensus       249 ~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~  325 (541)
                      +++.+++.+.++++++.               ...|+++.|++.   +..++++++.+++..+++||+|||+.+++|+++
T Consensus       191 ~~~~~~~~~~i~~r~~~---------------~~~d~l~~ll~~~~~~~~l~~~el~~~~~~~~~AG~eTt~~~l~~~l~  255 (411)
T 2jjn_A          191 NPLTAYLKARCAERRAD---------------PGDDLISRLVLAEVDGRALDDEEAANFSTALLLAGHITTTVLLGNIVR  255 (411)
T ss_dssp             HHHHHHHHHHHHHHHHS---------------CCSSHHHHHHHCCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhC---------------CCCCHHHHHHhcccCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            78888888888887652               236899999864   345999999999999999999999999999999


Q ss_pred             HHhcChHHHHHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCccc
Q 037522          326 LVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFV  405 (541)
Q Consensus       326 ~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~I  405 (541)
                      +|++||++|+++++|++                            ||+|+|+|+||++|+++...|.+. +++.++||.|
T Consensus       256 ~L~~~P~~~~~l~~E~~----------------------------~l~a~i~E~lRl~p~~~~~~R~~~-~d~~l~G~~I  306 (411)
T 2jjn_A          256 TLDEHPAHWDAAAEDPG----------------------------RIPAIVEEVLRYRPPFPQMQRTTT-KATEVAGVPI  306 (411)
T ss_dssp             HHHHSTHHHHHHHHCGG----------------------------GHHHHHHHHHHHSCSSCEEEEEES-SCEEETTEEE
T ss_pred             HHHhCHHHHHHHHhCHH----------------------------hHHHHHHHHhhhCCCcCCcceEEC-CCeEECCEEE
Confidence            99999999999998842                            789999999999999986445554 4555699999


Q ss_pred             CCCCEEEEehhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhce
Q 037522          406 PAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYH  485 (541)
Q Consensus       406 p~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~  485 (541)
                      |||+.|.++.+++||||++| +||++||||||.+          ...++|||+|+|.|+|++||+.|++++++.|+++|+
T Consensus       307 p~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~~----------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~  375 (411)
T 2jjn_A          307 PADVMVNTWVLSANRDSDAH-DDPDRFDPSRKSG----------GAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFG  375 (411)
T ss_dssp             CSSCEEEEEHHHHHTCTTTS-SSTTSCCTTCCCS----------SCCCGGGCSSTTCCTTHHHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEechhhhCCChhhc-CCccccCCCCCCC----------CCCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCC
Confidence            99999999999999999999 9999999999752          124899999999999999999999999999999996


Q ss_pred             -EEEeCCcccceeeeeEEecCCceeEEEeeCCCCCc
Q 037522          486 -LTVVPGHRVEQKMSLTLFMKYGLMMNVHPRELKPM  520 (541)
Q Consensus       486 -~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~~~  520 (541)
                       +++.++..+....+.......+++|++++|.+.|+
T Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~~~r~~~  411 (411)
T 2jjn_A          376 RLTVDRDDERLRHFEQIVLGTRHLPVLAGSSPRQSA  411 (411)
T ss_dssp             CCEECCSSCCCCBCCSSSSSBSCCEEECSCCTTCCC
T ss_pred             cceECCCCceeccccccccCcceeEEEecCCCCCCC
Confidence             99874333321334455667889999999887663


No 33 
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00  E-value=4.4e-58  Score=453.45  Aligned_cols=381  Identities=19%  Similarity=0.215  Sum_probs=295.9

Q ss_pred             CCCCCCCCCCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeec----c-CC-cceEEEecCChhhHHHHH-hcc
Q 037522           25 GSLSGPRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPV----L-GR-KQGLVTVTCDPKNVEHIL-KAR   97 (541)
Q Consensus        25 ~~~pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~----~-~~-~~~vvv~~~dp~~i~~v~-~~~   97 (541)
                      +.||||+++|+.     +.   .+++..+.++ ++||++|+   +   +    + ++ .+.+++  +||+.+++++ .++
T Consensus        10 ~lppgp~~~p~~-----~~---~~p~~~~~~l-~~yGpv~~---~---~~~~~~~~~~~~~vvv--~~~~~i~~vl~~~~   72 (406)
T 1ued_A           10 PLLREPANFQLR-----TN---CDPHEDNFGL-RAHGPLVR---I---VGESSTQLGRDFVWQA--HGYEVVRRILGDHE   72 (406)
T ss_dssp             CEEECCTTTTCE-----ET---TEECHHHHHH-HTTCSEEE---E---ESHHHHHTTSSCEEEE--CSHHHHHHHHHCCS
T ss_pred             CCcccCcccCCC-----CC---CCcHHHHHHH-HHhCCeee---e---cccccCCCCCccEEEE--cCHHHHHHHHhhCc
Confidence            457899999987     22   2477888888 99999876   3   4    3 67 789999  9999999999 553


Q ss_pred             CCCCCCChh--HHH-HHH--hhccCcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcc
Q 037522           98 FDNYPKGPT--WQA-AFH--DLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKP  172 (541)
Q Consensus        98 ~~~~~~~~~--~~~-~~~--~~~g~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~  172 (541)
                        .|.+++.  +.. .+.  ...+.+++..+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+..   .+++
T Consensus        73 --~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~---~g~~  145 (406)
T 1ued_A           73 --HFTTRPQFTQSKSGAHVEAQFVGQISTYDPPEHTRLRKMLTPEFTVRRIRRM-EPAIQSLI-DDRLDLLEA---EGPS  145 (406)
T ss_dssp             --SEECCCCC---------CGGGTTCGGGCCTTHHHHHHHHHGGGSSHHHHHHH-HHHHHHHH-HHHHHHHHH---HCTT
T ss_pred             --cccccccccccccccccccccccccccCCCHHHHHHHHHhhhhhCHHHHHHH-HHHHHHHH-HHHHHHHHh---cCCC
Confidence              3555443  110 111  1234578888999999999999999999999986 99999999 888888763   3568


Q ss_pred             eeHHHHHHH-HHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHH
Q 037522          173 VDFQDLLLR-MTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHI  251 (541)
Q Consensus       173 vdl~~~~~~-~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l  251 (541)
                      +|+.+.+.. +++++++ .+||.+...      ...+.+....+...     .              ...++..++.+.+
T Consensus       146 ~d~~~~~~~~~~~~vi~-~~~G~~~~~------~~~~~~~~~~~~~~-----~--------------~~~~~~~~~~~~~  199 (406)
T 1ued_A          146 ADLQGLFADPVGAHALC-ELLGIPRDD------QREFVRRIRRNADL-----S--------------RGLKARAADSAAF  199 (406)
T ss_dssp             EEHHHHTHHHHHHHHHH-HHHTCCHHH------HHHHHHHHHHCC----------------------CCHHHHHHHHHHH
T ss_pred             eeHHHHHHHHhHHHHHH-HHcCCCHHH------HHHHHHHHHHHHhc-----c--------------CCHHHHHHHHHHH
Confidence            999998875 9999999 479986421      12222222211110     0              0112334566778


Q ss_pred             HHHHHHHHHHHHHHHhccccccccccCCCCchhHHHHHhhc-CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcC
Q 037522          252 DEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKK-KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQN  330 (541)
Q Consensus       252 ~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~-~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~  330 (541)
                      .+++.+.++++++.               ...|+++.|++. +..++++++.+++..+++||+|||+.+++|++++|++|
T Consensus       200 ~~~~~~~i~~r~~~---------------~~~d~l~~ll~~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~  264 (406)
T 1ued_A          200 NRYLDNLLARQRAD---------------PDDGLLGMIVRDHGDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDN  264 (406)
T ss_dssp             HHHHHHHHHHHHHS---------------CCSSHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhC---------------CCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhC
Confidence            88888888877642               236789988864 34589999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCE
Q 037522          331 PRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGST  410 (541)
Q Consensus       331 P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~  410 (541)
                      |++|++|++|+.                            ||+|||+|+||++|+++...+|.+.+++.++||.||||+.
T Consensus       265 P~~~~~l~~e~~----------------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~  316 (406)
T 1ued_A          265 PGQIELLFESPE----------------------------KAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDY  316 (406)
T ss_dssp             GGGTTHHHHCHH----------------------------HHHHHHHHHHHHHCSSCSCSCEEESSCEEETTEEECTTCE
T ss_pred             hHHHHHHHhCHH----------------------------HHHHHHHHHHhcCCCcccCcceecCCCEEECCEEECCCCE
Confidence            999999998743                            5899999999999999975555445555569999999999


Q ss_pred             EEEehhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEe
Q 037522          411 VTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVV  489 (541)
Q Consensus       411 v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~  489 (541)
                      |.++.+++||||++| +||++|+||||-            ..++|||+|+|.|+|++||++|++++++.|+++| ++++.
T Consensus       317 V~~~~~~~~rdp~~~-~dp~~F~PeR~~------------~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~  383 (406)
T 1ued_A          317 VLCSILMANRDEALT-PDPDVLDANRAA------------VSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLA  383 (406)
T ss_dssp             EEECHHHHTTCTTTS-SSTTSCCTTSCC------------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEES
T ss_pred             EEecHHHhcCCchhC-CChhhcCCCCCC------------CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCceec
Confidence            999999999999999 999999999981            2489999999999999999999999999999999 79987


Q ss_pred             CC-cccceeeeeEEecCCceeEEE
Q 037522          490 PG-HRVEQKMSLTLFMKYGLMMNV  512 (541)
Q Consensus       490 ~~-~~~~~~~~~~~~~~~~~~v~~  512 (541)
                      ++ .++.+..+...++ .+++|++
T Consensus       384 ~~~~~~~~~~~~~~~~-~~lpv~~  406 (406)
T 1ued_A          384 VPIEEVKYRSAFVDCP-DQVPVTW  406 (406)
T ss_dssp             SCGGGCCBCCSSSCCB-SCCEEEC
T ss_pred             CCcccccccccccccC-CeeeeeC
Confidence            44 3455555666677 7777763


No 34 
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00  E-value=1.6e-57  Score=463.39  Aligned_cols=413  Identities=16%  Similarity=0.176  Sum_probs=293.1

Q ss_pred             cCCCCCCCCCCcCCChhhhhcc--chhhHHHHHHHHHHcCC-cccccceeeeccCCcce-------EEEecCChhhHHHH
Q 037522           24 SGSLSGPRVWPLLGSLPGLFQN--SKRLHDWISDNLRACGG-TYQTCIFAIPVLGRKQG-------LVTVTCDPKNVEHI   93 (541)
Q Consensus        24 ~~~~pgP~~~P~lG~~~~~~~~--~~~~~~~~~~~~~kyG~-v~~~~~~~~~~~~~~~~-------vvv~~~dp~~i~~v   93 (541)
                      .+.||||.+||++|+++++...  ..+++.++.++++|||+ ||+.      ++++.++       +++  .+++..+.+
T Consensus        27 ~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~------~l~~~~~vv~~p~~v~~--~~~~~~~~l   98 (495)
T 3dsk_A           27 IRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRV------NMPPGAFIAENPQVVAL--LDGKSFPVL   98 (495)
T ss_dssp             BCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEE------ECSCCTTTCSCCEEEEE--CSTTTGGGG
T ss_pred             CCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEee------cCCCCCCccCCCCEEEE--eCCcceeee
Confidence            3479999999999999988632  24688999999999999 9882      3344444       666  888888777


Q ss_pred             HhccC----CCCCCChhHHHHHHhhcc----CcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHH
Q 037522           94 LKARF----DNYPKGPTWQAAFHDLLG----DGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEV  165 (541)
Q Consensus        94 ~~~~~----~~~~~~~~~~~~~~~~~g----~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~  165 (541)
                      +.+..    ..+... .... . .++|    .+++..+|+.|+++|+++.+.|++.. ..+ .+.+++.+ +.+++.+.+
T Consensus        99 ~~~~~v~k~~~~~~~-~~~~-~-~l~g~~~~~~~~~~~g~~h~~~R~~~~~~f~~~~-~~~-~~~i~~~~-~~ll~~~~~  172 (495)
T 3dsk_A           99 FDVDKVEKKDLLTGT-YMPS-T-ELTGGYRILSYLDPSEPKHEKLKNLLFFLLKSSR-NRI-FPEFQATY-SELFDSLEK  172 (495)
T ss_dssp             GCTTTEECSSCTTSS-SCCC-G-GGGTTCCCGGGCCTTSHHHHHHHHHHHHHHHHTT-TTH-HHHHHHHH-HHHHHHHHH
T ss_pred             ccccccccccccccc-CCCC-c-cccCCCcceeeeCCCchHHHHHHHHHHHHHHHHH-HHH-HHHHHHHH-HHHHHHHHH
Confidence            75521    111111 0000 1 3444    34566799999999999999997643 554 89999888 777777765


Q ss_pred             hhhcCcceeHHHHHHHHHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhh---hchHHHHHHHHHhhhcccc
Q 037522          166 AQLEAKPVDFQDLLLRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRF---LLPQAIWKLRKYLRLGLEV  242 (541)
Q Consensus       166 ~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~~~~~~  242 (541)
                      ...+++++|+.+++..+++++++.++||.+....+  . ...+...+...........   .+|..+..+   +. ...+
T Consensus       173 ~~~~~~~vdl~~~~~~~~~~~i~~~~~G~~~~~~~--~-~~~~~~~~~~~~~~~~~p~~~~~~p~~~~~~---~~-~~~~  245 (495)
T 3dsk_A          173 ELSLKGKADFGGSSDGTAFNFLARAFYGTNPADTK--L-KADAPGLITKWVLFNLHPLLSIGLPRVIEEP---LI-HTFS  245 (495)
T ss_dssp             HHHHHSSEESHHHHHHHHHHHHHHHHHSCCGGGST--T-TTCHHHHHHHHHHHHHGGGCCCSSCHHHHHH---HH-SSSC
T ss_pred             HhccCCCccHHHHHHHHHHHHHHHHHcCCCcchhh--h-hhhHHHHHHHHHHHhhhhHhHhccHHHHHHH---HH-Hhhc
Confidence            43345689999999999999999999999876552  1 2344444443332211111   222221111   00 0000


Q ss_pred             cc----ccchHHHHHHHHHHHHHHHHHHhccccccccccCCCCchhHHHHHhhcCCCCCHHHHHHHHHHHH-HhccccHH
Q 037522          243 SM----GPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKKESYSDEFLQHVALNFI-LAGRDTSS  317 (541)
Q Consensus       243 ~~----~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~l~~~~i~~~~~~~~-~ag~~tt~  317 (541)
                      ..    ....+.+.+++.                       ....++++..  ++.+++++++..+++.++ +||++||+
T Consensus       246 ~~~~~~~~~~~~~~~~~~-----------------------~~~~~ll~~~--~~~~l~~~ei~~~~~~~l~~ag~~tt~  300 (495)
T 3dsk_A          246 LPPALVKSDYQRLYEFFL-----------------------ESAGEILVEA--DKLGISREEATHNLLFATCFNTWGGMK  300 (495)
T ss_dssp             CCGGGGHHHHHHHHHHHH-----------------------HHCHHHHHHH--HHTTCCHHHHHHHHHHHHHTTHHHHHH
T ss_pred             ccchhhhhhHHHHHHHHH-----------------------HHHHHHHHHH--HhCCCCHHHHHHHHHHHHHHHhhhhHH
Confidence            00    000011111110                       0113344443  223489999998776665 99999999


Q ss_pred             HHHHHHHHHHhc-ChHHHHHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccC
Q 037522          318 VAMSWFFWLVSQ-NPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSD  396 (541)
Q Consensus       318 ~~l~~~l~~L~~-~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~  396 (541)
                      .+++|++++|+. ||++|++||+|++++++..+         ..++.+++.+||||+|||+|+||++|+++...|++.+|
T Consensus       301 ~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~---------~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~a~~d  371 (495)
T 3dsk_A          301 ILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNG---------GELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKD  371 (495)
T ss_dssp             HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTT---------TCCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSC
T ss_pred             HHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCC---------CCCCHHHHhcCHHHHHHHHHHHhcCCCccccceeecCC
Confidence            999999999996 99999999999999987642         56899999999999999999999999999998987666


Q ss_pred             cccc---CCcccCCCCEEEEehhhhccCCCCccCCCCCccCCCCCCCCCCCC---C-CCCCccccccCCCCcccchHHHH
Q 037522          397 DVLP---TGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKY---E-GHDQYKFVAFNAGPRICLGKDLA  469 (541)
Q Consensus       397 ~~~~---~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~---~-~~~~~~~~~Fg~G~r~C~G~~~a  469 (541)
                      .++.   +||.||||+.|+++.+++||||++| +||++|||+||++.++...   . -.....++|||+|+|.|+|++||
T Consensus       372 ~~l~~~~~g~~IpkG~~v~~~~~~~~~dp~~~-~dp~~F~P~Rfl~~~~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA  450 (495)
T 3dsk_A          372 LVIESHDAAFKVKAGEMLYGYQPLATRDPKIF-DRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFV  450 (495)
T ss_dssp             EEEECSSCEEEECTTCEEEEEHHHHHTCTTTS-TTTTSCCTTTTCHHHHHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHH
T ss_pred             eEeccCCCceEECCCCEEEeccHHhhCCcccC-CCccccCCcccCCCCccchhhcccccCCcCcCCCCCCCCcCchHHHH
Confidence            6553   5999999999999999999999999 9999999999997532100   0 01122355666666999999999


Q ss_pred             HHHHHHHHHHHHhhceEEEeCCc
Q 037522          470 YLQMKSIAAEVLLRYHLTVVPGH  492 (541)
Q Consensus       470 ~~~~~~~l~~ll~~f~~~~~~~~  492 (541)
                      ..|++++++.|+++|++...++.
T Consensus       451 ~~e~~~~l~~ll~~f~~~~~~~~  473 (495)
T 3dsk_A          451 VLVARLFVIEIFRRYDSFDIEVG  473 (495)
T ss_dssp             HHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHCceEeCCCC
Confidence            99999999999999998765443


No 35 
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00  E-value=1.5e-56  Score=453.74  Aligned_cols=416  Identities=12%  Similarity=0.141  Sum_probs=290.2

Q ss_pred             hcCCCCCCCCCCcCCChhhhhcc--ch-hhHHHHHHHHHHcCC-cccccceeeec-cCCcceEEEecCChhhHHHHHhc-
Q 037522           23 MSGSLSGPRVWPLLGSLPGLFQN--SK-RLHDWISDNLRACGG-TYQTCIFAIPV-LGRKQGLVTVTCDPKNVEHILKA-   96 (541)
Q Consensus        23 ~~~~~pgP~~~P~lG~~~~~~~~--~~-~~~~~~~~~~~kyG~-v~~~~~~~~~~-~~~~~~vvv~~~dp~~i~~v~~~-   96 (541)
                      +.+.+|||.+||++|+++++...  .. +++.++.++++|||+ +|+.++..... ......+++  ++.+..+.++.. 
T Consensus         7 Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~--~~~~~~~~~~~~~   84 (473)
T 3dan_A            7 PLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVL--LDAKSFPILFDVS   84 (473)
T ss_dssp             CBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEE--CSTTTGGGGGCTT
T ss_pred             CCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEe--ecccccceecCCc
Confidence            34678999999999999987642  24 688899999999999 98822211111 113444555  777666555541 


Q ss_pred             ---cCCCCCCChhHHHHHHhhcc----CcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhc
Q 037522           97 ---RFDNYPKGPTWQAAFHDLLG----DGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLE  169 (541)
Q Consensus        97 ---~~~~~~~~~~~~~~~~~~~g----~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~  169 (541)
                         +...+..... . .. .++|    .+++..+|+.|+++|+++.+.|+++ +..+ .+.+.+.+ +.+++.+.+...+
T Consensus        85 ~~~~~~~~~~~~~-~-~~-~~~g~~~~~~~~~~~~~~h~~~R~~~~~~f~~~-~~~~-~~~i~~~~-~~ll~~~~~~~~~  158 (473)
T 3dan_A           85 KVEKKDLFTGTYM-P-ST-KLTGGYRVLSYLDPSEPRHAQLKNLLFFMLKNS-SNRV-IPQFETTY-TELFEGLEAELAK  158 (473)
T ss_dssp             TEECSSCTTSSSC-C-CG-GGGTTSCCGGGCCTTSHHHHHHHHHHHHHHHHH-HHHH-HHHHHHHH-HHHHHHHHHHHHH
T ss_pred             ceecccccccccc-C-Cc-cccCCCcceeeeCCCcHHHHHHHHHHHHHHHHH-HHHH-HHHHHHHH-HHHHHHHHHHhcc
Confidence               1111111100 0 00 1233    3457789999999999999999984 7775 89999999 8888877654444


Q ss_pred             CcceeHHHHHHHHHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhh---hchHHHHHHHHHhhhcccccc--
Q 037522          170 AKPVDFQDLLLRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRF---LLPQAIWKLRKYLRLGLEVSM--  244 (541)
Q Consensus       170 ~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~~~~~~~~--  244 (541)
                      ++++|+.+++..+++++++.++||.+....+  . ...+...............   .+|..+..+.   . . .++.  
T Consensus       159 ~~~vdl~~~~~~~~~~~i~~~~~G~~~~~~~--~-~~~~~~~~~~~~~~~~~p~~~~~lp~~~~~~~---~-~-~~~~~~  230 (473)
T 3dan_A          159 NGKAAFNDVGEQAAFRFLGRAYFNSNPEETK--L-GTSAPTLISSWVLFNLAPTLDLGLPWFLQEPL---L-H-TFRLPA  230 (473)
T ss_dssp             HSCEECHHHHHHHHHHHHHHHHHSCCGGGST--T-TTCHHHHHHHHHHHHHGGGCCCSCCHHHHHHH---H-S-SSCCCG
T ss_pred             CCcccHHHHHHHHHHHHHHHHHcCCCCCchh--h-hhhHHHHHHHHHHHhccchhhhcchHHHHHHH---h-h-hccchH
Confidence            5689999999999999999999999887622  2 2333333332221111111   2222111110   0 0 0000  


Q ss_pred             ---ccchHHHHHHHHHHHHHHHHHHhccccccccccCCCCchhHHHHHhh--cCCCCCHHHHHHHHHHHH-HhccccHHH
Q 037522          245 ---GPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMK--KKESYSDEFLQHVALNFI-LAGRDTSSV  318 (541)
Q Consensus       245 ---~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~~~~l~~~~i~~~~~~~~-~ag~~tt~~  318 (541)
                         .+..+.+.+++                           .++++.+++  ++..++++++..+++.++ ++|++||+.
T Consensus       231 ~~~~~~~~~~~~~~---------------------------~~~~~~ll~~~~~~~l~~~ei~~~~l~~~g~~~~~tta~  283 (473)
T 3dan_A          231 FLIKSTYNKLYDYF---------------------------QSVATPVMEQAEKLGVPKDEAVHNILFAVCFNTFGGVKI  283 (473)
T ss_dssp             GGTHHHHHHHHHHH---------------------------HHHCHHHHHHHHHHTCCHHHHHHHHHHHHHTHHHHHHHH
T ss_pred             hhhhhchhhhHHHH---------------------------HHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHhccccHHH
Confidence               11111111111                           233333333  123489999998887776 889999999


Q ss_pred             HHHHHHHHHhc-ChHHHHHHHHHHHHHhhh-hcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccC
Q 037522          319 AMSWFFWLVSQ-NPRVEDKIATEICTVLLE-TRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSD  396 (541)
Q Consensus       319 ~l~~~l~~L~~-~P~~~~~lr~Ei~~~~~~-~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~  396 (541)
                      +++|++++|+. ||++|++||+|++++++. ..         ..++.+++++||||+|+|+|+||++|+++...|++.+|
T Consensus       284 ~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~~---------~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d  354 (473)
T 3dan_A          284 LFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGD---------GNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSN  354 (473)
T ss_dssp             HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHST---------TSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSC
T ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHHhhcccC---------CCCCHHHHhcCchHHHHHHHHHhcCCCcccccccccCC
Confidence            99999999999 799999999999999876 32         56899999999999999999999999999988886554


Q ss_pred             cccc----CCcccCCCCEEEEehhhhccCCCCccCCCCCccCCCCCCCCCCCCC--C-CCCccccccCCCCcccchHHHH
Q 037522          397 DVLP----TGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYE--G-HDQYKFVAFNAGPRICLGKDLA  469 (541)
Q Consensus       397 ~~~~----~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~--~-~~~~~~~~Fg~G~r~C~G~~~a  469 (541)
                       +.+    +||.||||+.|.++.+++||||++| +||++|||+||++.......  . .....+++||+|+|.|+|++||
T Consensus       355 -~~l~~~~~g~~Ip~G~~v~~~~~~~~~dp~~~-~dp~~F~p~R~~~~~~~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA  432 (473)
T 3dan_A          355 -FTIESHDATFEVKKGEMLFGYQPFATKDPKVF-DRPEEYVPDRFVGDGEALLKYVWWSNGPETESPTVENKQCAGKDFV  432 (473)
T ss_dssp             -EEEECSSCEEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTTTSGGGGGGGGGCCTTSSCTTSCCCTTSCSCTTHHHH
T ss_pred             -cEeecCCCceEeCCCCEEEechHHhhCCchhc-CCcccCCccccCCCcccccccceecCCcCcCCCCCCCCCCCcHHHH
Confidence             455    8999999999999999999999999 99999999999976210000  0 0112345555556999999999


Q ss_pred             HHHHHHHHHHHHhhceEEEeCCc
Q 037522          470 YLQMKSIAAEVLLRYHLTVVPGH  492 (541)
Q Consensus       470 ~~~~~~~l~~ll~~f~~~~~~~~  492 (541)
                      ..|++++++.|+++|++...++.
T Consensus       433 ~~e~~~~l~~ll~~f~~~~~~~~  455 (473)
T 3dan_A          433 VLITRLFVIELFRRYDSFEIELG  455 (473)
T ss_dssp             HHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHhCCeEEccCC
Confidence            99999999999999997665443


No 36 
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00  E-value=1e-56  Score=444.33  Aligned_cols=372  Identities=16%  Similarity=0.140  Sum_probs=288.9

Q ss_pred             hhhHHHHHHHHHHcCCcc-----cccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChhHH-----HHH-Hhhc
Q 037522           47 KRLHDWISDNLRACGGTY-----QTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTWQ-----AAF-HDLL  115 (541)
Q Consensus        47 ~~~~~~~~~~~~kyG~v~-----~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~~-----~~~-~~~~  115 (541)
                      .+++.++.++ ++||++|     +   +   .+  .+.++|  +||+.+++++.++ ..|++++...     ..+ ....
T Consensus        25 ~~p~~~~~~l-~~~Gpv~~~~~~~---~---~~--~~~vvv--~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~   92 (414)
T 2uuq_A           25 PNPWPMYRAL-RDHDPVHHVVPPQ---R---PE--YDYYVL--SRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHD   92 (414)
T ss_dssp             TCCHHHHHHH-HHHCSEEEECCTT---C---GG--GCEEEE--CSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSS
T ss_pred             cCchHHHHHH-HhcCCEEcccccc---c---CC--CCEEEE--cCHHHHHHHHcCc-hhccCCCCcccccCccccccccc
Confidence            3577777777 5799987     5   2   22  578888  9999999999986 6787765321     111 1133


Q ss_pred             cCcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHH-HHHHHHHHHHHHhhhccC
Q 037522          116 GDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQ-DLLLRMTFDNICGLAFGK  194 (541)
Q Consensus       116 g~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~-~~~~~~~~~~~~~~~fG~  194 (541)
                      +.+++..+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+.    +++|+. +++..+++++++. +||.
T Consensus        93 ~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~~----~~vdl~~~~~~~~~~~vi~~-~~G~  165 (414)
T 2uuq_A           93 TPPMVMQDPPVHTEFRKLVSRGFTPRQVETV-EPTVRKFV-VERLEKLRAN----GGGDIVTELFKPLPSMVVAH-YLGV  165 (414)
T ss_dssp             SCCGGGCCTTHHHHHHHHHHTTSSHHHHHHH-HHHHHHHH-HHHHHHHHHT----TEEEHHHHTTTHHHHHHHHH-HTTC
T ss_pred             ccccccCCchhHHHHHHHhhhhcCHHHHHHH-HHHHHHHH-HHHHHHHHhc----CCccHHHHHHHHhHHHHHHH-HhCC
Confidence            6788888999999999999999999999986 99999999 8888877642    369997 5668999999999 6898


Q ss_pred             CCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccccc
Q 037522          195 DPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQG  274 (541)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~  274 (541)
                      +...      ...+.+....+...    ..+    .      +.  ..+..++.+.+.+++.+.++++++.         
T Consensus       166 ~~~~------~~~~~~~~~~~~~~----~~~----~------p~--~~~~~~~~~~~~~~~~~~i~~r~~~---------  214 (414)
T 2uuq_A          166 PEED------WTQFDGWTQAIVAA----NAV----D------GA--TTGALDAVGSMMAYFTGLIERRRTE---------  214 (414)
T ss_dssp             CGGG------HHHHHHHHHHHHHH----HHC-----------------CCHHHHHHHHHHHHHHHHHHTTS---------
T ss_pred             CHHH------HHHHHHHHHHHHhh----ccc----C------Cc--hhHHHHHHHHHHHHHHHHHHHHHhC---------
Confidence            7642      12333333222211    001    0      10  0234456677888888888776532         


Q ss_pred             cccCCCCchhHHHHHhhcC-----CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhc
Q 037522          275 EAATTTPHDDLLSRFMKKK-----ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR  349 (541)
Q Consensus       275 ~~~~~~~~~~~l~~ll~~~-----~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~  349 (541)
                            ...|+++.|++..     ..++++++.+++..+++||+|||+.+++|++++|++||++|++|++|+        
T Consensus       215 ------~~~dll~~ll~~~~~~~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~--------  280 (414)
T 2uuq_A          215 ------PADDAISHLVAAGVGADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDP--------  280 (414)
T ss_dssp             ------CCSSHHHHHHHTTTTCTTCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG--------
T ss_pred             ------CCCCHHHHHHhcccccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCH--------
Confidence                  2368999888642     237899999999999999999999999999999999999999999874        


Q ss_pred             CCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCC
Q 037522          350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDC  429 (541)
Q Consensus       350 ~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p  429 (541)
                                          +||+|+|+|+||++|+++...|.+ .+++.++||.||||+.|+++.+++||||++||+||
T Consensus       281 --------------------~~l~a~i~E~lRl~p~~~~~~R~~-~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP  339 (414)
T 2uuq_A          281 --------------------EGIPDAVEELLRLTSPVQGLARTT-TRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDA  339 (414)
T ss_dssp             --------------------GGHHHHHHHHHHHHCSBCCEEEEE-SSCEEETTEEECTTCEEEECHHHHTTCHHHHCTTT
T ss_pred             --------------------HHHHHHHHHHHHhCCCcCCcceEE-CCCEEECCEEECCCCEEEeChhhhCCCHHHhCCCc
Confidence                                289999999999999999444445 45555699999999999999999999999999999


Q ss_pred             CCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCCcccceeeeeEEecCCce
Q 037522          430 LEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPGHRVEQKMSLTLFMKYGL  508 (541)
Q Consensus       430 ~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~  508 (541)
                      ++|+||||.            ..++|||+|+|.|+|++||+.|++++++.|+++| ++++.+ ....+..+.+..+..++
T Consensus       340 ~~F~PeR~~------------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~-~~~~~~~~~~~~~~~~l  406 (414)
T 2uuq_A          340 AELDVTRCP------------RNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVAE-SRIVWSGGSYVRRPLSV  406 (414)
T ss_dssp             TSCCTTCCC------------CSCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCCSEEECG-GGCEECCCSSBCCEEEC
T ss_pred             hhcCCCCCC------------CCCcCCCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEECC-CCccccccccccCccee
Confidence            999999984            1389999999999999999999999999999999 699873 34445555566777899


Q ss_pred             eEEEeeCC
Q 037522          509 MMNVHPRE  516 (541)
Q Consensus       509 ~v~~~~r~  516 (541)
                      +|+++||.
T Consensus       407 pv~~~~r~  414 (414)
T 2uuq_A          407 PFRVTSSR  414 (414)
T ss_dssp             EEEEC---
T ss_pred             EEEecCCC
Confidence            99999874


No 37 
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00  E-value=1.3e-56  Score=443.60  Aligned_cols=381  Identities=17%  Similarity=0.174  Sum_probs=289.2

Q ss_pred             hhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChhH-----HHHHHhhccCcceec
Q 037522           48 RLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTW-----QAAFHDLLGDGIFNS  122 (541)
Q Consensus        48 ~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~-----~~~~~~~~g~~l~~~  122 (541)
                      +++.++.++ ++||++|+   +   .+++.+.+++  ++|+.+++++.++ ..|.+++..     ...+....+.+++..
T Consensus        14 ~p~~~~~~~-r~yGpv~~---~---~~~~~~~vvv--~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   83 (404)
T 3ejb_B           14 NPYSFYDTL-RAVHPIYK---G---SFLKYPGWYV--TGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQMMLFQ   83 (404)
T ss_dssp             CHHHHHHHH-HHHCSEEE---E---EETTEEEEEE--CCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTSGGGC
T ss_pred             CchHHHHHH-HhhCCEee---c---cCCCCCEEEE--ecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcchhhc
Confidence            577777777 68999876   3   5678899999  9999999999987 666665421     111223457788999


Q ss_pred             CChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHH-HHHHHHHHHhhhccCCCCccCC
Q 037522          123 DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLL-LRMTFDNICGLAFGKDPQTLSQ  201 (541)
Q Consensus       123 ~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~  201 (541)
                      +|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+    +..+|+...+ ..+++++++.+ ||.+...   
T Consensus        84 ~g~~h~~~Rr~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~----~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~---  153 (404)
T 3ejb_B           84 NQPDHRRLRTLASGAFTPRTTESY-QPYIIETV-HHLLDQVQG----KKKMEVISDFAFPLASFVIANI-IGVPEED---  153 (404)
T ss_dssp             CTTHHHHHHHHHHGGGSHHHHHTT-HHHHHHHH-HHHHHTTTT----TSEEEHHHHTHHHHHHHHHHHH-HTCCGGG---
T ss_pred             CCchHHHHHHHHHhhcCHHHHHHH-HHHHHHHH-HHHHHHhhh----cCCcchHHHHHHHHHHHHHHHH-cCCCHHH---
Confidence            999999999999999999999986 89999998 777776642    4578986554 56899999985 8976532   


Q ss_pred             CCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccccccccCCCC
Q 037522          202 GLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTP  281 (541)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~  281 (541)
                         ...+.+....+.    .....|.. .        ...++..++.+.+.+++.+.++++++.               .
T Consensus       154 ---~~~~~~~~~~~~----~~~~~p~~-~--------~~~~~~~~~~~~~~~~~~~~i~~r~~~---------------~  202 (404)
T 3ejb_B          154 ---REQLKEWAASLI----QTIDFTRS-R--------KALTEGNIMAVQAMAYFKELIQKRKRH---------------P  202 (404)
T ss_dssp             ---HHHHHHHHHHHH----GGGSTTCC-H--------HHHHHHHHHHHHHHHHHHHHHHHHHHS---------------C
T ss_pred             ---HHHHHHHHHHHH----HhccCCCC-H--------HHHHHHHHHHHHHHHHHHHHHHHHHhC---------------C
Confidence               122333222221    11111200 0        012234456678888888888877632               3


Q ss_pred             chhHHHHHhhc--CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCcccccC
Q 037522          282 HDDLLSRFMKK--KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEE  359 (541)
Q Consensus       282 ~~~~l~~ll~~--~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~  359 (541)
                      ..|+++.++.+  +..++++++..++..+++||+|||+.+++|++++|++||++|+++++|++                 
T Consensus       203 ~~d~l~~ll~~~~~~~ls~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~-----------------  265 (404)
T 3ejb_B          203 QQDMISMLLKGREKDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPD-----------------  265 (404)
T ss_dssp             CSSHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-----------------
T ss_pred             cchHHHHHHhcccCCCCCHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH-----------------
Confidence            46888888832  33599999999999999999999999999999999999999999998743                 


Q ss_pred             CCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccCCCCCC
Q 037522          360 PLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLS  439 (541)
Q Consensus       360 ~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~  439 (541)
                                 |++++|+|+||++|+++. .+|.+.+++.++||.||||+.|.++.+++||||++| +||++|+||||. 
T Consensus       266 -----------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~rdp~~~-~dp~~F~p~R~~-  331 (404)
T 3ejb_B          266 -----------LIGTAVEECLRYESPTQM-TARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIF-TNPDVFDITRSP-  331 (404)
T ss_dssp             -----------GHHHHHHHHHHHSCSBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTCSS-
T ss_pred             -----------HHHHHHHHHHHhCCcccc-cceEeCCCeEECCEEECCCCEEEecHHHhCCChhhC-CCcceeCCCCCC-
Confidence                       689999999999999994 455555555569999999999999999999999999 999999999982 


Q ss_pred             CCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCCcccceeeeeEEecCCceeEEEeeCCCC
Q 037522          440 QDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPGHRVEQKMSLTLFMKYGLMMNVHPRELK  518 (541)
Q Consensus       440 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~  518 (541)
                                 ..++|||+|+|.|+|++||+.|++++++.|+++| ++++.++ ++.+..+...+....++|++++|...
T Consensus       332 -----------~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~-~~~~~~~~~~~~~~~lpv~~~~~~~~  399 (404)
T 3ejb_B          332 -----------NPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLADF-EWRYRPLFGFRALEELPVTFEASWSH  399 (404)
T ss_dssp             -----------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEEC---CCCBCSCSSBCCBSCCEEECC-----
T ss_pred             -----------CCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCcccccCCC-CceeccCcccCCcceeEEEEeccccC
Confidence                       2379999999999999999999999999999999 9999743 34555566667778999999999877


Q ss_pred             Cccc
Q 037522          519 PMLE  522 (541)
Q Consensus       519 ~~~~  522 (541)
                      |-.|
T Consensus       400 p~~~  403 (404)
T 3ejb_B          400 PQFE  403 (404)
T ss_dssp             ----
T ss_pred             cccc
Confidence            6443


No 38 
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00  E-value=5.7e-57  Score=445.88  Aligned_cols=391  Identities=14%  Similarity=0.089  Sum_probs=303.2

Q ss_pred             hcCCCCCCCCCCcC--CChhhhhcc--chhhHHHHHHHHHHcC--Ccccccceeeec-cCCcceEEEecCChhhHHHHHh
Q 037522           23 MSGSLSGPRVWPLL--GSLPGLFQN--SKRLHDWISDNLRACG--GTYQTCIFAIPV-LGRKQGLVTVTCDPKNVEHILK   95 (541)
Q Consensus        23 ~~~~~pgP~~~P~l--G~~~~~~~~--~~~~~~~~~~~~~kyG--~v~~~~~~~~~~-~~~~~~vvv~~~dp~~i~~v~~   95 (541)
                      .++.||||.+.|..  +.+-.+...  ..+++.++.+++ +||  ++|+   +   . +|  +.+++  +|++.+++++.
T Consensus         9 ~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~---~---~~~g--~~vvv--~~~~~v~~vl~   77 (415)
T 2zwu_A            9 NANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVW---T---RCNG--GHWIA--TRGQLIREAYE   77 (415)
T ss_dssp             --CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEE---E---CGGG--CEEEE--CSHHHHHHHHH
T ss_pred             ccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEE---e---cCCC--CeEEE--cCHHHHHHHHc
Confidence            34578999998864  433211111  246788888885 899  9866   2   3 33  67888  99999999998


Q ss_pred             ccCCCCCCCh-hHHHHHHhhccCc-ceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcce
Q 037522           96 ARFDNYPKGP-TWQAAFHDLLGDG-IFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPV  173 (541)
Q Consensus        96 ~~~~~~~~~~-~~~~~~~~~~g~~-l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~v  173 (541)
                      +. ..|++++ .+... ...++.+ ++..+|+.|+++|+++.+.|+++.++.+ .+.+.+++ +.+++.+.+   . +++
T Consensus        78 ~~-~~f~~~~~~~~~~-~~~~~~~~l~~~~g~~~~~~R~~~~~~f~~~~l~~~-~~~i~~~~-~~l~~~l~~---~-~~~  149 (415)
T 2zwu_A           78 DY-RHFSSECPFIPRE-AGEAYDFIPTSMDPPEQRQFRALANQVVGMPVVDKL-ENRIQELA-CSLIESLRP---Q-GQC  149 (415)
T ss_dssp             CT-TTEETTSCSSSHH-HHHHCCCTTTTCCTTTTHHHHHHHHHHHSHHHHHHH-HHHHHHHH-HHHHHHHGG---G-TEE
T ss_pred             Cc-cccCCCcccCCCC-ccccccccCccCCCcHHHHHHHHHHhhhCHHHHHHH-HHHHHHHH-HHHHHHHHh---c-CCc
Confidence            65 5787775 22211 2233677 8888999999999999999999999986 89999999 888777754   1 379


Q ss_pred             eHHHHH-HHHHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHH
Q 037522          174 DFQDLL-LRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHID  252 (541)
Q Consensus       174 dl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~  252 (541)
                      |+.+.+ ..+++++++.+ ||.+...      ...+.+....+..     ...|              . +..++.+.+.
T Consensus       150 d~~~~~~~~~~~~vi~~~-~G~~~~~------~~~~~~~~~~~~~-----~~~P--------------~-~~~~~~~~~~  202 (415)
T 2zwu_A          150 NFTEDYAEPFPIRIFMLL-AGLPEED------IPHLKYLTDQMTR-----PDGS--------------M-TFAEAKEALY  202 (415)
T ss_dssp             EHHHHTTTHHHHHHHHHH-HTCCGGG------HHHHHHHHHHHHS-----CCSS--------------S-CHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHH-cCCCHHH------HHHHHHHHHHHHh-----ccCH--------------H-HHHHHHHHHH
Confidence            999865 78999999999 9987642      1233332222111     0001              1 3445667888


Q ss_pred             HHHHHHHHHHHHHHhccccccccccCCCCchhHHHHHhhc---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhc
Q 037522          253 EYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKK---KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQ  329 (541)
Q Consensus       253 ~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~  329 (541)
                      +++.+.++++++.               ...|+++.|++.   +..++++++..++..+++||+|||+.+++|++++|++
T Consensus       203 ~~~~~~i~~r~~~---------------~~~dll~~ll~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~  267 (415)
T 2zwu_A          203 DYLIPIIEQRRQK---------------PGTDAISIVANGQVNGRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAK  267 (415)
T ss_dssp             HHHHHHHHHHHHS---------------CCSSHHHHHHTCEETTEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhC---------------CCCCHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHh
Confidence            8888888887652               236899999864   3348999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCC
Q 037522          330 NPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGS  409 (541)
Q Consensus       330 ~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt  409 (541)
                      ||++|+++++|++                            ||+|+|+|+||++|+++.. |.+.+ ++.++||.||||+
T Consensus       268 ~P~~~~~l~~E~~----------------------------~l~a~i~E~lRl~p~~~~~-R~~~~-d~~~~G~~Ip~Gt  317 (415)
T 2zwu_A          268 SPEHRQELIERPE----------------------------RIPAACEELLRRFSLVADG-RILTS-DYEFHGVQLKKGD  317 (415)
T ss_dssp             CHHHHHHHHHCGG----------------------------GHHHHHHHHHHHTCCBCCE-EEESS-CEEETTEEECTTC
T ss_pred             CHHHHHHHHhCHH----------------------------HHHHHHHHHHhhcCCcCCc-eeeCC-CEEECCEEECCCC
Confidence            9999999999832                            7899999999999999965 55554 4555999999999


Q ss_pred             EEEEehhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhce-EEE
Q 037522          410 TVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYH-LTV  488 (541)
Q Consensus       410 ~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~  488 (541)
                      .|+++.+++||||++| +||++|+||||-            ..++|||+|+|.|+|++||+.|++++++.|+++|+ +++
T Consensus       318 ~V~~~~~~~~rdp~~~-~dP~~F~PeR~~------------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~  384 (415)
T 2zwu_A          318 QILLPQMLSGLDEREN-ACPMHVDFSRQK------------VSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSI  384 (415)
T ss_dssp             EEECCHHHHHHCTTTS-SSTTSCCTTCSS------------CCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHCCSCEE
T ss_pred             EEEeCchhhCCCchhC-CCccccCCCCCC------------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCCEE
Confidence            9999999999999999 999999999951            24899999999999999999999999999999998 999


Q ss_pred             eCCcccceeeeeEEecCCceeEEEeeCCCC
Q 037522          489 VPGHRVEQKMSLTLFMKYGLMMNVHPRELK  518 (541)
Q Consensus       489 ~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~  518 (541)
                      .++..+. ..+....+..+++|++++|.++
T Consensus       385 ~~~~~~~-~~~~~~~~~~~lpv~~~~r~~~  413 (415)
T 2zwu_A          385 APGAQIQ-HKSGIVSGVQALPLVWDPATTK  413 (415)
T ss_dssp             CTTCCCC-EECSSBCEESCCEEECCGGGCC
T ss_pred             CCCcccc-cCCccccCcceeEEEEecCCCC
Confidence            7643331 3344455677899999988743


No 39 
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00  E-value=1.6e-56  Score=442.35  Aligned_cols=370  Identities=19%  Similarity=0.228  Sum_probs=292.4

Q ss_pred             hhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChhHH-H-----HHHhhccCccee
Q 037522           48 RLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTWQ-A-----AFHDLLGDGIFN  121 (541)
Q Consensus        48 ~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~~-~-----~~~~~~g~~l~~  121 (541)
                      +++.++.++ ++||++|+   +   .+++.+.++|  ++|+.+++++.++ . |++++... .     .+....+.+++.
T Consensus        21 ~p~~~~~~l-~~yGpv~~---~---~~~~~~~vvv--~~~~~v~~vl~~~-~-f~~~~~~~~~~~~~~~~~~~~~~~l~~   89 (411)
T 3a4g_A           21 NPHPAYAAL-RAEDPVRK---L---ALPDGPVWLL--TRYADVREAFVDP-R-LSKDWRHTLPEDQRADMPATPTPMMIL   89 (411)
T ss_dssp             CCHHHHHHH-HHHCSEEE---E---EETTEEEEEE--CSHHHHHHHHTCT-T-EESCGGGGSCGGGCTTCCSCSSCCGGG
T ss_pred             CchHHHHHH-HhcCCeee---c---cCCCCCEEEE--ecHHHHHHHHhCC-C-cccccccccccccccccCccccccccc
Confidence            578888888 89999876   3   4567788999  9999999999986 3 87775432 1     011123567888


Q ss_pred             cCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHH-HHHHHHHHHHhhhccCCCCccC
Q 037522          122 SDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDL-LLRMTFDNICGLAFGKDPQTLS  200 (541)
Q Consensus       122 ~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~-~~~~~~~~~~~~~fG~~~~~~~  200 (541)
                      .+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+    ++++|+... ...+++++++.+ ||.+...  
T Consensus        90 ~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~----~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~--  160 (411)
T 3a4g_A           90 MDPPDHTRLRKLVGRSFTVRRMNEL-EPRITEIA-DGLLAGLPT----DGPVDLMREYAFQIPVQVICEL-LGVPAED--  160 (411)
T ss_dssp             CCTTHHHHHHHHHHTTCCHHHHHHH-HHHHHHHH-HHHHHHSCS----SSCEEHHHHTTTTHHHHHHHHH-HTCCGGG--
T ss_pred             CCchHHHHHHHHhhhhhCHHHHHHH-HHHHHHHH-HHHHHHHHh----cCCccHHHHHHHHhHHHHHHHH-hCCCHHH--
Confidence            8999999999999999999999986 89999998 777776642    257999755 568999999975 8987531  


Q ss_pred             CCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccccccccCCC
Q 037522          201 QGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTT  280 (541)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~~~  280 (541)
                          ...+.+....+...      .|              .++..++.+.+.+++.+.++++++.               
T Consensus       161 ----~~~~~~~~~~~~~~------~p--------------~~~~~~~~~~~~~~~~~~i~~r~~~---------------  201 (411)
T 3a4g_A          161 ----RDDFSAWSSVLVDD------SP--------------ADDKNAAMGKLHGYLSDLLERKRTE---------------  201 (411)
T ss_dssp             ----HHHHHHHHHHHTTS------SC--------------TTTHHHHHHHHHHHHHHHHHHHHHS---------------
T ss_pred             ----HHHHHHHHHHHhcc------CC--------------HHHHHHHHHHHHHHHHHHHHHHHhC---------------
Confidence                12232222211100      11              1234456677888888888887652               


Q ss_pred             CchhHHHHHhhc----CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCccc
Q 037522          281 PHDDLLSRFMKK----KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKW  356 (541)
Q Consensus       281 ~~~~~l~~ll~~----~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~  356 (541)
                      ...|+++.|++.    +..++++++.+++..+++||+|||+.+++|++++|+.||++|+++++|+.              
T Consensus       202 ~~~d~l~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~--------------  267 (411)
T 3a4g_A          202 PDDALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPS--------------  267 (411)
T ss_dssp             CCSSHHHHHHHCCCTTCCCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG--------------
T ss_pred             CCCCHHHHHHHhhccCCCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCHH--------------
Confidence            235899999863    23599999999999999999999999999999999999999999998731              


Q ss_pred             ccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccCCC
Q 037522          357 VEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPER  436 (541)
Q Consensus       357 ~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~R  436 (541)
                                    ||+|||+|+||++|+++...+|.+.+++.++||.||||+.|.++.+++||||++| +||++|+|||
T Consensus       268 --------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR  332 (411)
T 3a4g_A          268 --------------LISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWM-PEPDRLDITR  332 (411)
T ss_dssp             --------------GHHHHHHHHHHHTCSBCBCCCEEESSCEEETTEEECTTCEEEEBHHHHTTCTTTS-SSTTSCCTTS
T ss_pred             --------------HHHHHHHHHHHhcccccCCceeEeCCCEEECCEEECCCCEEEeChhhhCCChhhc-CCccccCCCC
Confidence                          7899999999999999944444445555569999999999999999999999999 9999999999


Q ss_pred             CCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCC-cccceeeeeEEecCCceeEEEee
Q 037522          437 WLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPG-HRVEQKMSLTLFMKYGLMMNVHP  514 (541)
Q Consensus       437 f~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~  514 (541)
                      |.            ..++|||+|+|.|+|++||+.|++++++.|+++| ++++.++ .++.+..+....+..+++|++++
T Consensus       333 ~~------------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~  400 (411)
T 3a4g_A          333 DA------------SGGVFFGHGIHFCLGAQLARLEGRVAIGRLFADRPELALAVGLDELVYRESTLVRGLSRMPVTMGP  400 (411)
T ss_dssp             CC------------TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCCTTBCCBSCCEEECCC
T ss_pred             CC------------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCcEECCCccccccccCccccCcceeEEEecC
Confidence            83            2489999999999999999999999999999999 6998754 34444445556677899999998


Q ss_pred             CCC
Q 037522          515 REL  517 (541)
Q Consensus       515 r~~  517 (541)
                      |+.
T Consensus       401 r~~  403 (411)
T 3a4g_A          401 RSA  403 (411)
T ss_dssp             CCC
T ss_pred             cch
Confidence            864


No 40 
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00  E-value=1.5e-56  Score=442.61  Aligned_cols=384  Identities=17%  Similarity=0.212  Sum_probs=295.0

Q ss_pred             cCCCCCCCCCCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeecc-CCcc-eEEEecCChhhHHHHHhccCCCC
Q 037522           24 SGSLSGPRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVL-GRKQ-GLVTVTCDPKNVEHILKARFDNY  101 (541)
Q Consensus        24 ~~~~pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~-~~~~-~vvv~~~dp~~i~~v~~~~~~~~  101 (541)
                      ++.+|+|+.+|+.++..      .+++.++.+++ +||++|+   +   .+ ++.+ .++|  +||+.+++++.+  ..|
T Consensus         7 ~~~~~~~~~~p~~~~~~------~~p~~~~~~l~-~~Gpv~~---~---~~~~g~~p~~vv--~~~~~v~~vl~~--~~f   69 (406)
T 1s1f_A            7 SQAVPPVRDWPAVDLPG------SDFDPVLTELM-REGPVTR---I---SLPNGEGWAWLV--TRHDDVRLVTND--PRF   69 (406)
T ss_dssp             -CCSCCEEECCCCCCCT------TCCCHHHHHHH-HHCSEEE---E---ECSBSBSCEEEE--CSHHHHHHHHTC--TTE
T ss_pred             hhhccCCCCCCCCcccc------cCchHHHHHHH-hcCCeee---e---ccCCCcccEEEE--cCHHHHHHHHcC--CCc
Confidence            45788888889887722      24677777774 7999876   2   32 4555 8999  999999999986  457


Q ss_pred             CCChhHHHH---HHh-h--ccCcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeH
Q 037522          102 PKGPTWQAA---FHD-L--LGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDF  175 (541)
Q Consensus       102 ~~~~~~~~~---~~~-~--~g~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl  175 (541)
                      .+++.....   +.. .  .+.+++..+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+   .++++|+
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~---~~~~~d~  144 (406)
T 1s1f_A           70 GREAVMDRQVTRLAPHFIPARGAVGFLDPPDHTRLRRSVAAAFTARGVERV-RERSRGML-DELVDAMLR---AGPPADL  144 (406)
T ss_dssp             ESTTTTTTTBCBSSSSCSSCTTSGGGCCTTHHHHHHHHHHHHHSHHHHHHH-HHHHHHHH-HHHHHHHHH---HCSSEEH
T ss_pred             cCCcCCCCCcccccccccccccccccCCchHHHHHHHHHHHhhCHHHHHHH-HHHHHHHH-HHHHHHHHh---cCCCccH
Confidence            776533211   111 2  35678888999999999999999999999986 99999999 888887763   2458999


Q ss_pred             HHHH-HHHHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHH
Q 037522          176 QDLL-LRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEY  254 (541)
Q Consensus       176 ~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~  254 (541)
                      ...+ ..+++++++. +||.+...      ...+......+...                 +. . .++..++.+.+.++
T Consensus       145 ~~~~~~~~~~~vi~~-~~G~~~~~------~~~~~~~~~~~~~~-----------------~~-~-~~~~~~~~~~~~~~  198 (406)
T 1s1f_A          145 TEAVLSPFPIAVICE-LMGVPATD------RHSMHTWTQLILSS-----------------SH-G-AEVSERAKNEMNAY  198 (406)
T ss_dssp             HHHTTTHHHHHHHHH-HHTCCGGG------HHHHHHHHHHHHHH-----------------HT-T-CCCCHHHHTHHHHH
T ss_pred             HHHHhhHhHHHHHHH-HhCCCHHH------HHHHHHHHHHHHhc-----------------cC-C-HHHHHHHHHHHHHH
Confidence            8766 5799999998 58987532      12333322221110                 00 0 23445566777788


Q ss_pred             HHHHHHHHHHHHhccccccccccCCCCchhHHHHHhhc--CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChH
Q 037522          255 LSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKK--KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPR  332 (541)
Q Consensus       255 ~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~--~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~  332 (541)
                      +.++++++++.               ...|+++.|++.  ...++++++.+++..+++|| |||+.+++|++++|+.||+
T Consensus       199 ~~~~i~~r~~~---------------~~~d~l~~ll~~~~~~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~  262 (406)
T 1s1f_A          199 FSDLIGLRSDS---------------AGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPE  262 (406)
T ss_dssp             HHHHHHTSCCS---------------CCCSHHHHHHHHHHTTSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHH
T ss_pred             HHHHHHHHHhC---------------CCCCHHHHHHHhhcccCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHH
Confidence            88777765421               235888888863  24589999999999999999 9999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCC-CCccccccCccccCCcccCCCCEE
Q 037522          333 VEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVP-QDSKHVVSDDVLPTGTFVPAGSTV  411 (541)
Q Consensus       333 ~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~-~~~~~~~~~~~~~~g~~Ip~Gt~v  411 (541)
                      +|++|++|++                            |++|+|+|+||++|+++ ...+|.+.+++.++||.||||+.|
T Consensus       263 ~~~~l~~E~~----------------------------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~i~G~~Ip~Gt~V  314 (406)
T 1s1f_A          263 LAERLRSEPE----------------------------IRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAV  314 (406)
T ss_dssp             HHHHHHHCGG----------------------------GHHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEE
T ss_pred             HHHHHHhCHH----------------------------HHHHHHHHHHhhCCCccccCcceEeCCCEEECCEEECCCCEE
Confidence            9999998842                            68999999999999999 344444445555699999999999


Q ss_pred             EEehhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeC
Q 037522          412 TYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVP  490 (541)
Q Consensus       412 ~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~  490 (541)
                      .++.+++||||++| +||++|+||||.            ..++|||+|+|.|+|++||+.|++++++.|+++| ++++.+
T Consensus       315 ~~~~~~~~rdp~~~-~dP~~F~PeR~~------------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~  381 (406)
T 1s1f_A          315 YVSYLAANRDPEVF-PDPDRIDFERSP------------NPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAV  381 (406)
T ss_dssp             EECHHHHTTCTTTS-SSTTSCCTTC--------------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESS
T ss_pred             EeCcHHhcCCcccC-CCcceeCCCCCC------------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCcEeCC
Confidence            99999999999999 999999999995            1379999999999999999999999999999999 799976


Q ss_pred             C-cccceeeeeEEecCCceeEEE
Q 037522          491 G-HRVEQKMSLTLFMKYGLMMNV  512 (541)
Q Consensus       491 ~-~~~~~~~~~~~~~~~~~~v~~  512 (541)
                      + .++.+..+...+...+++|++
T Consensus       382 ~~~~~~~~~~~~~~~~~~lpv~~  404 (406)
T 1s1f_A          382 APEDVPFKKGALIRGPEALPVTW  404 (406)
T ss_dssp             CGGGSCBCSSCSBCCBSCCEEEC
T ss_pred             CCccceeccCcccCCcceeEEee
Confidence            6 344455555566677888876


No 41 
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=8.4e-57  Score=444.77  Aligned_cols=373  Identities=18%  Similarity=0.231  Sum_probs=292.9

Q ss_pred             hhHHHHHHHHHHcCCcccccceeeecc-CCcceEEEecCChhhHHHHHhccCCCCCCCh-hHHHHH-----------Hhh
Q 037522           48 RLHDWISDNLRACGGTYQTCIFAIPVL-GRKQGLVTVTCDPKNVEHILKARFDNYPKGP-TWQAAF-----------HDL  114 (541)
Q Consensus        48 ~~~~~~~~~~~kyG~v~~~~~~~~~~~-~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~-~~~~~~-----------~~~  114 (541)
                      +++..+.++ ++||++|+   +   ++ ++.+.+++  +||+.+++++.++  .+++++ .+....           ...
T Consensus        18 ~p~~~~~~l-~~yGpv~~---~---~~~g~~~~vvv--~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (411)
T 1gwi_A           18 DLDGESARL-RAAGPLAA---V---ELPGGVPVWAV--THHAEAKALLTDP--RLVKDINVWGAWRRGEIPADWPLIGLA   86 (411)
T ss_dssp             CHHHHHHHH-HHTCSEEE---E---EETTTEEEEEE--CSHHHHHHHHTCT--TEECCGGGCHHHHTTCSCTTCTTHHHH
T ss_pred             ChHHHHHHH-HHhCCeee---e---ecCCCccEEEE--eCHHHHHHHHcCC--ccccCcccccccccccCCcccchhhhh
Confidence            577888888 99999876   3   44 67889999  9999999999875  245543 121110           001


Q ss_pred             c-cCcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHH-HHHHHHHHhhhc
Q 037522          115 L-GDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLL-RMTFDNICGLAF  192 (541)
Q Consensus       115 ~-g~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~~~~~~~f  192 (541)
                      . +.+++..+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+   .++++|+...+. .+++++++. +|
T Consensus        87 ~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~  160 (411)
T 1gwi_A           87 NPGRSMLTVDGAEHRRLRTLVAQALTVRRVEHM-RGRITELT-DRLLDELPA---DGGVVDLKAAFAYPLPMYVVAD-LM  160 (411)
T ss_dssp             SCCSSGGGCCHHHHHHHHHHHTTTSCHHHHHTT-HHHHHHHH-HHHHHTSCC---SCCCEEHHHHTTTHHHHHHHHH-HH
T ss_pred             ccccccccCCcHHHHHHHHHHHHhcCHHHHHHH-HHHHHHHH-HHHHHHHHH---cCCCcchHHHHhhHHHHHHHHH-Hh
Confidence            2 5578888999999999999999999999886 89999988 777776642   356899998876 599999996 69


Q ss_pred             cCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccc
Q 037522          193 GKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDRE  272 (541)
Q Consensus       193 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~  272 (541)
                      |.+...      ...+......+..    .. .              ..++..++.+.+.+++.++++++++.       
T Consensus       161 G~~~~~------~~~~~~~~~~~~~----~~-~--------------~~~~~~~~~~~~~~~~~~~i~~r~~~-------  208 (411)
T 1gwi_A          161 GIEEAR------LPRLKVLFEKFFS----TQ-T--------------PPEEVVATLTELASIMTDTVAAKRAA-------  208 (411)
T ss_dssp             TCCGGG------HHHHHHHHHHHHC----TT-S--------------CHHHHHHHHHHHHHHHHHHHHHHHHS-------
T ss_pred             CCCHHH------HHHHHHHHHHHhc----cC-C--------------ChHHHHHHHHHHHHHHHHHHHHHHhC-------
Confidence            986531      1233333222211    00 0              01233456677888888888877642       


Q ss_pred             cccccCCCCchhHHHHHhhc---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhc
Q 037522          273 QGEAATTTPHDDLLSRFMKK---KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR  349 (541)
Q Consensus       273 ~~~~~~~~~~~~~l~~ll~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~  349 (541)
                              ...|+++.|++.   +..++++++.+++..+++||+|||+.+++|++++|+.||++|++|++|+        
T Consensus       209 --------~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~--------  272 (411)
T 1gwi_A          209 --------PGDDLTSALIQASENGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGE--------  272 (411)
T ss_dssp             --------CCSSHHHHHHHCCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS--------
T ss_pred             --------CCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh--------
Confidence                    236899999863   3459999999999999999999999999999999999999999999762        


Q ss_pred             CCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCC
Q 037522          350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDC  429 (541)
Q Consensus       350 ~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p  429 (541)
                                          +||+|||+|+||++|+++...+|.+.+++.++||.||||+.|+++.+++||||++||+||
T Consensus       273 --------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP  332 (411)
T 1gwi_A          273 --------------------AEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTA  332 (411)
T ss_dssp             --------------------SCHHHHHHHHHHHSCSBCCEEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCGGG
T ss_pred             --------------------HHHHHHHHHHHHhCCcccCCceeeeCCCeEECCEEECCCCEEEecHHHhcCChhhcCCCh
Confidence                                268999999999999998755555555666699999999999999999999999999999


Q ss_pred             CCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCC-cccceeeeeEEecCCc
Q 037522          430 LEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPG-HRVEQKMSLTLFMKYG  507 (541)
Q Consensus       430 ~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~  507 (541)
                      ++|+||||.+           ..++|||+|+|.|+|++||++|++++++.|+++| ++++..+ .++....+....+..+
T Consensus       333 ~~F~PeRf~~-----------~~~lpFG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  401 (411)
T 1gwi_A          333 DRFDLTRTSG-----------NRHISFGHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVPAAELRNKPVVTQNDLFE  401 (411)
T ss_dssp             GSCCTTCCCS-----------SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCSCTTBCCBSC
T ss_pred             hhcCCCCCCC-----------CCcccCCCCcccCCCHHHHHHHHHHHHHHHHHhCccceeCCCcccccccccccccCcce
Confidence            9999999952           3489999999999999999999999999999999 7998643 3444544555677889


Q ss_pred             eeEEEeeCC
Q 037522          508 LMMNVHPRE  516 (541)
Q Consensus       508 ~~v~~~~r~  516 (541)
                      ++|++++|.
T Consensus       402 lpv~~~~r~  410 (411)
T 1gwi_A          402 LPVRLAHHH  410 (411)
T ss_dssp             CEEESSCC-
T ss_pred             eEEEecCCC
Confidence            999999885


No 42 
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00  E-value=3.7e-56  Score=440.63  Aligned_cols=386  Identities=18%  Similarity=0.208  Sum_probs=293.8

Q ss_pred             CCCCCCCCCcCCChhhhhccchhhHHHHHHHHHHc-CCcccccceeeecc-CCcceEEEecCChhhHHHHHhccCCCCCC
Q 037522           26 SLSGPRVWPLLGSLPGLFQNSKRLHDWISDNLRAC-GGTYQTCIFAIPVL-GRKQGLVTVTCDPKNVEHILKARFDNYPK  103 (541)
Q Consensus        26 ~~pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~ky-G~v~~~~~~~~~~~-~~~~~vvv~~~dp~~i~~v~~~~~~~~~~  103 (541)
                      .+|+|+++|.+.....+.   .+++.++.++ ++| |++|+   +   .+ ++.+.++|  +||+.+++++.++  .+.+
T Consensus         6 ~~~~~~~~P~~~~~~~~~---~~p~~~~~~l-~~~yGpv~~---~---~~~g~~~~vvv--~~~~~v~~vl~~~--~~~~   71 (412)
T 2zbx_A            6 TTPQTTDAPAFPSNRSCP---YQLPDGYAQL-RDTPGPLHR---V---TLYDGRQAWVV--TKHEAARKLLGDP--RLSS   71 (412)
T ss_dssp             --CCCCSSCBSSCCCSST---TSCCHHHHHH-HHSSSSEEE---E---ECTTSCEEEEE--CSHHHHHHHHTCT--TEEC
T ss_pred             CCCCCCCCCCCCCCchhc---cChHHHHHHH-HhcCCCeEe---e---ccCCCCcEEEE--ecHHHHHHHHcCc--cccc
Confidence            578888888763333343   3577888888 888 99876   3   44 77889999  9999999999874  2444


Q ss_pred             Chh---HHHHH--H-hh--ccCcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeH
Q 037522          104 GPT---WQAAF--H-DL--LGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDF  175 (541)
Q Consensus       104 ~~~---~~~~~--~-~~--~g~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl  175 (541)
                      ++.   +....  . .+  .+.+++..+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+   .++++|+
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~---~g~~~d~  146 (412)
T 2zbx_A           72 NRTDDNFPATSPRFEAVRESPQAFIGLDPPEHGTRRRMTISEFTVKRIKGM-RPEVEEVV-HGFLDEMLA---AGPTADL  146 (412)
T ss_dssp             CTTSTTSCCCSGGGC----CCCCGGGCCTTHHHHHHTTTGGGGSHHHHHHH-HHHHHHHH-HHHHHHHHH---HCSCEEH
T ss_pred             CcccccccccccccccccccccccccCCcHHHHHHHHHhhhhcCHHHHHHH-HHHHHHHH-HHHHHHHHh---cCCCccH
Confidence            332   11000  0 01  24568888999999999999999999999986 99999999 888887763   3568999


Q ss_pred             HHHHH-HHHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHH
Q 037522          176 QDLLL-RMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEY  254 (541)
Q Consensus       176 ~~~~~-~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~  254 (541)
                      .+.+. .+++++++. +||.+...      ...+.+....+..       ..            .. ++..++.+.+.++
T Consensus       147 ~~~~~~~~~~~vi~~-~~G~~~~~------~~~~~~~~~~~~~-------~~------------~~-~~~~~~~~~~~~~  199 (412)
T 2zbx_A          147 VSQFALPVPSMVICR-LLGVPYAD------HEFFQDASKRLVQ-------ST------------DA-QSALTARNDLAGY  199 (412)
T ss_dssp             HHHTTTHHHHHHHHH-HHTCCGGG------HHHHHHHHHHHHH-------CS------------SH-HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH-HcCCCHHH------HHHHHHHHHHHhc-------cC------------cH-HHHHHHHHHHHHH
Confidence            99886 489999997 69986531      1233333222211       00            00 2334466778888


Q ss_pred             HHHHHHHHHHHHhccccccccccCCCCchhHHHHHhhc---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcCh
Q 037522          255 LSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKK---KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNP  331 (541)
Q Consensus       255 ~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P  331 (541)
                      +.++++++++.               ...|+++.|++.   +..++++++.+++..+++||+|||+.+++|++++|++||
T Consensus       200 ~~~~i~~r~~~---------------~~~d~l~~ll~~~~~~~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P  264 (412)
T 2zbx_A          200 LDGLITQFQTE---------------PGAGLVGALVADQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHP  264 (412)
T ss_dssp             HHHHHHHHHHS---------------CCSSHHHHHHHTTTTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred             HHHHHHHHHhC---------------CCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
Confidence            88888877643               235799998863   345999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEE
Q 037522          332 RVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTV  411 (541)
Q Consensus       332 ~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v  411 (541)
                      ++|++|++|++                            ||+|||+|+||++|+++...+|.+.+++.++||.|||||.|
T Consensus       265 ~~~~~l~~e~~----------------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V  316 (412)
T 2zbx_A          265 EQYAALRADRS----------------------------LVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGV  316 (412)
T ss_dssp             HHHHHHHHCGG----------------------------GHHHHHHHHHHHHCCCGGGCEEEESSCEEETTEEECTTCEE
T ss_pred             HHHHHHHhChH----------------------------hHHHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEE
Confidence            99999998621                            68999999999999999554554455555699999999999


Q ss_pred             EEehhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeC
Q 037522          412 TYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVP  490 (541)
Q Consensus       412 ~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~  490 (541)
                      .++.+++||||++| +||++|+||||-            ..++|||+|+|.|+|++||++|++++++.|+++| ++++.+
T Consensus       317 ~~~~~~~~rdp~~~-~dP~~F~PeR~~------------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~  383 (412)
T 2zbx_A          317 IVVNSIANRDGTVY-EDPDALDIHRSA------------RHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTLRLAV  383 (412)
T ss_dssp             EECHHHHTTCTTTS-SSTTSCCTTSCC------------TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESS
T ss_pred             EeChhhhcCCcccc-CCccccCCCCCC------------CCccCCCCCCCcCccHHHHHHHHHHHHHHHHHhcCcccccC
Confidence            99999999999999 999999999971            2489999999999999999999999999999999 799875


Q ss_pred             C-cccceeeeeEEecCCceeEEEe
Q 037522          491 G-HRVEQKMSLTLFMKYGLMMNVH  513 (541)
Q Consensus       491 ~-~~~~~~~~~~~~~~~~~~v~~~  513 (541)
                      + .++.+..+...+....++|+..
T Consensus       384 ~~~~~~~~~~~~~~g~~~lpv~~~  407 (412)
T 2zbx_A          384 PVEQLVLRPGTTIQGVNELPVTWH  407 (412)
T ss_dssp             CGGGSCBCCTTSCCCBSCCEEECC
T ss_pred             CcccceeccccccCCcceeeeecc
Confidence            4 3444444444444455666543


No 43 
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00  E-value=1.4e-56  Score=446.13  Aligned_cols=400  Identities=15%  Similarity=0.121  Sum_probs=293.4

Q ss_pred             CCCCCCCCCCcCCChhhhhcc-c-hhhHHHHHHHHHHcCCcccccceeeecc-CCcceEEEecCChhhHHHHHhccCCCC
Q 037522           25 GSLSGPRVWPLLGSLPGLFQN-S-KRLHDWISDNLRACGGTYQTCIFAIPVL-GRKQGLVTVTCDPKNVEHILKARFDNY  101 (541)
Q Consensus        25 ~~~pgP~~~P~lG~~~~~~~~-~-~~~~~~~~~~~~kyG~v~~~~~~~~~~~-~~~~~vvv~~~dp~~i~~v~~~~~~~~  101 (541)
                      +.|||     ++|++...-.. . .+++.++.++.+ ||++|+   +   ++ |+.+.++|  ++++.+++++++. ..|
T Consensus         6 ~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~---~---~~~g~~~~vvv--~~~~~v~~vl~~~-~~f   70 (428)
T 1cpt_A            6 TIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAM---A---HIEGYDPMWIA--TKHADVMQIGKQP-GLF   70 (428)
T ss_dssp             CSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEE---E---CCTTSCCEEEE--CSHHHHHHHHHCT-TTE
T ss_pred             ccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeee---c---cccCCCCeEEE--ccHHHHHHHHcCc-hhc
Confidence            45666     78875443211 1 357788887766 789866   2   44 67889999  9999999999875 567


Q ss_pred             CCChh-HH-----H-H-HHhhcc------CcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhh
Q 037522          102 PKGPT-WQ-----A-A-FHDLLG------DGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQ  167 (541)
Q Consensus       102 ~~~~~-~~-----~-~-~~~~~g------~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~  167 (541)
                      ++++. ..     . . +....|      .+++..+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+  
T Consensus        71 s~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~g~~~~~~Rr~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~--  146 (428)
T 1cpt_A           71 SNAEGSEILYDQNNEAFMRSISGGCPHVIDSLTSMDPPTHTAYRGLTLNWFQPASIRKL-EENIRRIA-QASVQRLLD--  146 (428)
T ss_dssp             ESSSSCSSCCCHHHHHHHHHHTTTSSCSSCCGGGCCTTHHHHHHHHHHTTSSHHHHGGG-HHHHHHHH-HHHHHHHHT--
T ss_pred             cCccccccCCcccccchhccccccccccccccccCChHHHHHHHHHhhhhhCHHHHHHH-HHHHHHHH-HHHHHHHHH--
Confidence            66543 11     0 0 111132      468888999999999999999999999886 89999999 888877754  


Q ss_pred             hcCcceeHHHH-HHHHHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchH-HHHHHHHHhhhccccccc
Q 037522          168 LEAKPVDFQDL-LLRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQ-AIWKLRKYLRLGLEVSMG  245 (541)
Q Consensus       168 ~~~~~vdl~~~-~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~  245 (541)
                       .++++|+... ...+++++++.+ ||.+...      ...+.+....+....     .+. ...+++..++....++..
T Consensus       147 -~~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~------~~~~~~~~~~~~~~~-----~~~~~~~P~l~~~~~~~~~~~~  213 (428)
T 1cpt_A          147 -FDGECDFMTDCALYYPLHVVMTA-LGVPEDD------EPLMLKLTQDFFGVH-----EPDEQAVAAPRQSADEAARRFH  213 (428)
T ss_dssp             -SSSEEEHHHHTTTTHHHHHHHHH-HTCCGGG------HHHHHHHHHTTTCC---------------------CHHHHHH
T ss_pred             -hCCCeehHHHHHhhhHHHHHHHH-cCCCHhH------HHHHHHHHHHHHhcc-----cccccccccccccchhhHHHHH
Confidence             2257999855 567999999999 9987542      122332222211100     010 001111111101113445


Q ss_pred             cchHHHHHHHHHHHHHHHHHHhccccccccccCCCCchhHHHHHhhc---CCCCCHHHHHHHHHHHHHhccccHHHHHHH
Q 037522          246 PSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKK---KESYSDEFLQHVALNFILAGRDTSSVAMSW  322 (541)
Q Consensus       246 ~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~  322 (541)
                      ++.+.+.+++.+.++++++.               ...|+++.|++.   +..++++++.+++..+++||+|||+.+++|
T Consensus       214 ~~~~~~~~~~~~~i~~r~~~---------------~~~dll~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~  278 (428)
T 1cpt_A          214 ETIATFYDYFNGFTVDRRSC---------------PKDDVMSLLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGG  278 (428)
T ss_dssp             HHHHHHHHHHHHHHHHHTTS---------------CCSSHHHHHHHCBSSSSBCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcC---------------CCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56677778888888776531               235899999863   234899999999999999999999999999


Q ss_pred             HHHHHhcChHHHHHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCC
Q 037522          323 FFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTG  402 (541)
Q Consensus       323 ~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g  402 (541)
                      ++++|++||++|++|++|++                            ||+|+|+|+||++|+++...|.+.+ ++.++|
T Consensus       279 ~l~~L~~~P~~~~~l~~E~~----------------------------~l~a~i~E~lRl~p~~~~~~R~~~~-d~~l~G  329 (428)
T 1cpt_A          279 AIIGLSRNPEQLALAKSDPA----------------------------LIPRLVDEAVRWTAPVKSFMRTALA-DTEVRG  329 (428)
T ss_dssp             HHHHHHHCHHHHHHHHHCGG----------------------------GHHHHHHHHHHHHCCBCCCEEEESS-CEEETT
T ss_pred             HHHHHHhCHHHHHHHHHhHH----------------------------HHHHHHHHHHHhCCcccccceeeCC-CeeECC
Confidence            99999999999999998842                            7899999999999999865555554 455699


Q ss_pred             cccCCCCEEEEehhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHh
Q 037522          403 TFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLL  482 (541)
Q Consensus       403 ~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~  482 (541)
                      |.|||||.|+++.+++||||++| +||++|+||||.+            .++|||+|+|.|+|++||++|++++++.|++
T Consensus       330 ~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~~------------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~  396 (428)
T 1cpt_A          330 QNIKRGDRIMLSYPSANRDEEVF-SNPDEFDITRFPN------------RHLGFGWGAHMCLGQHLAKLEMKIFFEELLP  396 (428)
T ss_dssp             EEECTTCEEEECHHHHTTCTTTC-SSTTSCCTTCCSC------------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHGG
T ss_pred             EEECCCCEEEeCHHHhCCChhhC-CChhhcCCCCCCC------------CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999 9999999999841            2899999999999999999999999999999


Q ss_pred             hce-EEEeCCcccceeeeeEEecCCceeEEEeeC
Q 037522          483 RYH-LTVVPGHRVEQKMSLTLFMKYGLMMNVHPR  515 (541)
Q Consensus       483 ~f~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  515 (541)
                      +|+ +++.++..  +........+.+++|+++||
T Consensus       397 ~f~~~~~~~~~~--~~~~~~~~~~~~lpv~~~p~  428 (428)
T 1cpt_A          397 KLKSVELSGPPR--LVATNFVGGPKNVPIRFTKA  428 (428)
T ss_dssp             GEEEEEESSCCE--ECCCSSBCSEEECEEEEEEC
T ss_pred             hCCCceeCCCcc--cccCccccCcceeeEEeeCC
Confidence            998 78763322  22233334456788988875


No 44 
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00  E-value=6.3e-56  Score=437.25  Aligned_cols=370  Identities=16%  Similarity=0.140  Sum_probs=288.9

Q ss_pred             hhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChhHHH--------HHHhhccCcc
Q 037522           48 RLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTWQA--------AFHDLLGDGI  119 (541)
Q Consensus        48 ~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~~~--------~~~~~~g~~l  119 (541)
                      +++.++..+ ++||++|+       .  +.+.++|  +||+.+++++.+  ..|.+++....        .+..+++.++
T Consensus        14 ~p~~~~~~l-~~yGpv~~-------~--g~~~~vv--~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~l   79 (397)
T 3buj_A           14 DPYPSYHWL-LRHDPVHR-------G--AHRVWYV--SRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDII   79 (397)
T ss_dssp             CCHHHHHHH-HHHCSEEE-------C--GGGCEEE--CSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTCG
T ss_pred             CchHHHHHH-HhcCCeee-------C--CCCeEEE--cCHHHHHHHHcC--CCcccCccccccccccccccccccccccc
Confidence            466776665 68999732       3  4678889  999999999986  46776543221        1112236788


Q ss_pred             eecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHH-HHHHHHHHHHhhhccCCCCc
Q 037522          120 FNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDL-LLRMTFDNICGLAFGKDPQT  198 (541)
Q Consensus       120 ~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~-~~~~~~~~~~~~~fG~~~~~  198 (541)
                      +..+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+    ++++|+... ...+++++++.+ ||.+...
T Consensus        80 ~~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~----~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~  152 (397)
T 3buj_A           80 LFQDEPDHGRLRGVVGPAFSPSALRRL-EPVIAGTV-DDLLRPALA----RGAMDVVDELAYPLALRAVLGL-LGLPAAD  152 (397)
T ss_dssp             GGCCTTHHHHHHHHHGGGSSTTTTGGG-HHHHHHHH-HHHHHHHHT----TTEEEHHHHTHHHHHHHHHHHH-HTCCGGG
T ss_pred             ccCCchhHHHHHHHHHHhcCHHHHHHH-HHHHHHHH-HHHHHHHhh----cCCeehHHHHHHHhHHHHHHHH-hCCCHHH
Confidence            888999999999999999999999886 89999999 888777753    347998754 578999999998 9987542


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccccccccC
Q 037522          199 LSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAAT  278 (541)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~  278 (541)
                            ...+......+...    ...+  +       +....++..++.+.+.+++.+.++++++.             
T Consensus       153 ------~~~~~~~~~~~~~~----~~~~--~-------~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------------  200 (397)
T 3buj_A          153 ------WGAVGRWSRDVGRT----LDRG--A-------SAEDMRRGHAAIAEFADYVERALARRRRE-------------  200 (397)
T ss_dssp             ------HHHHHHHHHHHHGG----GCSS--C-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------
T ss_pred             ------HHHHHHHHHHHHhh----cCCC--C-------ChHHHHHHHHHHHHHHHHHHHHHHHHHcC-------------
Confidence                  12333332222111    1000  0       00012234456678888899988888754             


Q ss_pred             CCCchhHHHHHhhc---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCcc
Q 037522          279 TTPHDDLLSRFMKK---KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSK  355 (541)
Q Consensus       279 ~~~~~~~l~~ll~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~  355 (541)
                        ...|+++.|++.   ++ ++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++             
T Consensus       201 --~~~dll~~ll~~~~~~~-ls~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~-------------  264 (397)
T 3buj_A          201 --GGEDLLALMLDAHDRGL-MSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRPD-------------  264 (397)
T ss_dssp             --CCCSHHHHHHHHHHTTS-SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCGG-------------
T ss_pred             --CCCCHHHHHHHhhhcCC-CCHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCHH-------------
Confidence              235788888863   33 99999999999999999999999999999999999999999998731             


Q ss_pred             cccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccCC
Q 037522          356 WVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPE  435 (541)
Q Consensus       356 ~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~  435 (541)
                                     ||+|+|+|+||++|+++ ..+|.+.+++.++||.||||+.|.++.+++||||++| +||++|+||
T Consensus       265 ---------------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~Pe  327 (397)
T 3buj_A          265 ---------------LLAQAVEECLRYDPSVQ-SNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRY-DRPDDFDIE  327 (397)
T ss_dssp             ---------------GHHHHHHHHHHHSCSCC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTC-SSTTSCCTT
T ss_pred             ---------------HHHHHHHHHHhhcCccc-CcceEECCCEEECCEEECCCCEEEEChhhhCCCcccc-CCccccCCC
Confidence                           79999999999999999 4445445555569999999999999999999999999 999999999


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCC-cccceeeeeEEecCCceeEEEe
Q 037522          436 RWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPG-HRVEQKMSLTLFMKYGLMMNVH  513 (541)
Q Consensus       436 Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~  513 (541)
                      ||.            ..++|||+|+|.|+|++||+.|++++++.| ++| ++++.++ .++.+..+.+..++.+++|+++
T Consensus       328 R~~------------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~l-~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~  394 (397)
T 3buj_A          328 RDP------------VPSMSFGAGMRYCLGSYLARTQLRAAVAAL-ARLPGLRLGCASDALAYQPRTMFRGLASLPIAFT  394 (397)
T ss_dssp             SCC------------CCCSTTCCGGGCCTTHHHHHHHHHHHHHHH-HTSTTCEESSCSTTCCBCSCSSCCCBSCCEEECC
T ss_pred             CCC------------CCCCCCCCCCccCCCHHHHHHHHHHHHHHH-hcCCCceeCCCCcccccccccccCCCcceeEEec
Confidence            994            237999999999999999999999999999 999 8999765 4444555566677889999998


Q ss_pred             eCC
Q 037522          514 PRE  516 (541)
Q Consensus       514 ~r~  516 (541)
                      ||.
T Consensus       395 ~rg  397 (397)
T 3buj_A          395 PGG  397 (397)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            873


No 45 
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00  E-value=5.3e-56  Score=439.16  Aligned_cols=368  Identities=16%  Similarity=0.188  Sum_probs=288.7

Q ss_pred             hhHHHHHHHHHHcCCcccccceeeecc-CCcceEEEecCChhhHHHHHhccCCCCCCChh---HHH--HHHh---hccCc
Q 037522           48 RLHDWISDNLRACGGTYQTCIFAIPVL-GRKQGLVTVTCDPKNVEHILKARFDNYPKGPT---WQA--AFHD---LLGDG  118 (541)
Q Consensus        48 ~~~~~~~~~~~kyG~v~~~~~~~~~~~-~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~---~~~--~~~~---~~g~~  118 (541)
                      +++..+.++ ++||++|+   +   ++ |+.+.++|  +||+.+++++.++  .|.+++.   +..  .+..   ..+.+
T Consensus        25 ~p~~~~~~l-~~yGpv~~---~---~~~g~~~~vvv--~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (408)
T 3abb_A           25 QPPKAYEER-RGESPLTQ---V---TLFDGRPAWLI--TGHAEGRALLVDP--RLSSDWGHPDFPVVVRRTEDRGGLAFP   93 (408)
T ss_dssp             SCCHHHHHH-CCSSSEEE---E---ECTTSCEEEEE--CCHHHHHHHHTCT--TEECCTTSTTCCCCC---------CCT
T ss_pred             CchHHHHHH-HhcCCeee---e---ecCCCCcEEEE--eCHHHHHHHHcCC--CcccccccccccccccCCccccccccc
Confidence            467788888 89999876   3   54 77889999  9999999999874  2444322   110  0111   12357


Q ss_pred             ceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHH-HHHHHHHHhhhccCCCC
Q 037522          119 IFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLL-RMTFDNICGLAFGKDPQ  197 (541)
Q Consensus       119 l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fG~~~~  197 (541)
                      ++..+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+..   .++++|+...+. .+++++++. +||.+..
T Consensus        94 l~~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~  167 (408)
T 3abb_A           94 LIGVDDPVHARQRRMLIPSFGVKRMNAI-RPRLQSLV-DRLLDDMLA---KGPGADLVSAFALPVPSVAICE-LLGVPYG  167 (408)
T ss_dssp             TTTCCTTHHHHHHHHHGGGGCHHHHHHH-HHHHHHHH-HHHHHHHHH---TCSCEEHHHHTTTHHHHHHHHH-HHTCCGG
T ss_pred             cccCCchHHHHHHHHhhhhcCHHHHHHH-HHHHHHHH-HHHHHHHHh---cCCCeehHHHHHHHHHHHHHHH-HhCCCHH
Confidence            8888999999999999999999999886 99999999 888887763   356899998876 589999997 6998653


Q ss_pred             ccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhcccccccccc
Q 037522          198 TLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAA  277 (541)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~  277 (541)
                      .      ...+......+..       .+            .. ++..++.+.+.+++.++++++++.            
T Consensus       168 ~------~~~~~~~~~~~~~-------~~------------~~-~~~~~~~~~~~~~~~~~i~~r~~~------------  209 (408)
T 3abb_A          168 D------HDFFEECSRNFVG-------AA------------TS-AEADAAFGELYTYLHGLVGRKQAE------------  209 (408)
T ss_dssp             G------HHHHHHHHHHHC--------------------------CCSSHHHHHHHHHHHHHHHHHHS------------
T ss_pred             H------HHHHHHHHHHHhc-------cc------------ch-HHHHHHHHHHHHHHHHHHHHHHhC------------
Confidence            1      1223322221111       00            01 455677888999999999887653            


Q ss_pred             CCCCchhHHHHHhhc---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCc
Q 037522          278 TTTPHDDLLSRFMKK---KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVS  354 (541)
Q Consensus       278 ~~~~~~~~l~~ll~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~  354 (541)
                         ...|+++.|++.   +..++++++.+++..+++||+|||+.+++|++++|+.||++|++|++|+.            
T Consensus       210 ---~~~d~l~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~------------  274 (408)
T 3abb_A          210 ---PEDGLLDELIARQLEEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPG------------  274 (408)
T ss_dssp             ---CCSSHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCHH------------
T ss_pred             ---CCCCHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------
Confidence               235788888863   44599999999999999999999999999999999999999999987632            


Q ss_pred             ccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccC
Q 037522          355 KWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKP  434 (541)
Q Consensus       355 ~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p  434 (541)
                                      ||+|||+|+||++|+++ ..+|.+.+++.++||.|||||.|+++.+++||||++| +||++|+|
T Consensus       275 ----------------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~P  336 (408)
T 3abb_A          275 ----------------AVSGVVEELLRFTSVSD-HIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAY-ENPDIFDA  336 (408)
T ss_dssp             ----------------HHHHHHHHHHHHHCSSC-EEEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCT
T ss_pred             ----------------hHHHHHHHHHHhcCccc-ccceEeCCCeEECCEEECCCCEEEeChHHhcCCcccC-CCcccCCC
Confidence                            68999999999999999 5555555555569999999999999999999999999 99999999


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCC-cccceeeeeEEecCCceeEEE
Q 037522          435 ERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPG-HRVEQKMSLTLFMKYGLMMNV  512 (541)
Q Consensus       435 ~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~  512 (541)
                      |||-            ..++|||+|+|.|+|++||++|++++++.|+++| ++++..+ ..+.+..+...++..+++|++
T Consensus       337 eR~~------------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~  404 (408)
T 3abb_A          337 RRNA------------RHHVGFGHGIHQCLGQNLARAELEIALGGLFARIPGLRLAVPLDEVPIKAGHDAQGPIELPVVW  404 (408)
T ss_dssp             TSCC------------TTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGSCBCCTTSCCSBSCCEEEC
T ss_pred             CCCC------------CCCCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCccceecCCccccccccCcccCCcceeEEEe
Confidence            9961            2489999999999999999999999999999999 7998654 344444455566778899998


Q ss_pred             eeC
Q 037522          513 HPR  515 (541)
Q Consensus       513 ~~r  515 (541)
                      ++|
T Consensus       405 ~~~  407 (408)
T 3abb_A          405 HHH  407 (408)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            876


No 46 
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.1e-55  Score=435.74  Aligned_cols=373  Identities=17%  Similarity=0.166  Sum_probs=291.3

Q ss_pred             hhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChhHHHHHHhhccCcceecCChh
Q 037522           47 KRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAFHDLLGDGIFNSDGDT  126 (541)
Q Consensus        47 ~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~g~~  126 (541)
                      .+++.++.++++ ||++|+        ++ .+.++|  +||+.+++++.++ ..|++++...  .....+.+++..+|+.
T Consensus        18 ~~p~~~~~~l~~-~Gpv~~--------~~-~~~vvv--~~~~~v~~vl~~~-~~f~~~~~~~--~~~~~~~~l~~~~g~~   82 (398)
T 2xkr_A           18 REARAAYRWMRA-NQPVFR--------DR-NGLAAA--STYQAVIDAERQP-ELFSNAGGIR--PDQPALPMMIDMDDPA   82 (398)
T ss_dssp             TTHHHHHHHHHH-HCSEEE--------CT-TCCEEE--CSHHHHHHHHTCT-TTEESTTCSS--TTSCCCSSGGGCCTTH
T ss_pred             cChhHHHHHHHh-cCCeee--------cC-CCeEEE--ecHHHHHHHHhCc-ccccCccccC--CcccccccccccCchH
Confidence            357888888877 999855        22 378888  9999999999876 5687765322  1223456788889999


Q ss_pred             HHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHH-HHHHHHHHHHHHhhhccCCCCccCCCCCc
Q 037522          127 WLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQ-DLLLRMTFDNICGLAFGKDPQTLSQGLPE  205 (541)
Q Consensus       127 w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~-~~~~~~~~~~~~~~~fG~~~~~~~~~~~~  205 (541)
                      |+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+    ++++|+. +++..+++++++.+ ||.+...      .
T Consensus        83 h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~------~  149 (398)
T 2xkr_A           83 HLLRRKLVNAGFTRKRVKDK-EASIAALC-DTLIDAVCE----RGECDFVRDLAAPLPMAVIGDM-LGVRPEQ------R  149 (398)
T ss_dssp             HHHHHHHHGGGSCHHHHHTT-HHHHHHHH-HHHHHTTTT----TSEEEHHHHTTTHHHHHHHHHH-HTCCGGG------H
T ss_pred             HHHHHHHhhhhhCHHHHHHH-HHHHHHHH-HHHHHhhhh----cCCccHHHHHHHHHHHHHHHHH-hCCCHHH------H
Confidence            99999999999999999886 89999988 777776643    2479999 55568999999998 9997532      1


Q ss_pred             chHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccccccccCCCCchhH
Q 037522          206 NSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDL  285 (541)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~  285 (541)
                      ..+.+....+..... ....|.            ..++..++.+.+.+++.+.++++++.               ...|+
T Consensus       150 ~~~~~~~~~~~~~~~-~~~~p~------------~~~~~~~~~~~~~~~~~~~i~~r~~~---------------~~~dl  201 (398)
T 2xkr_A          150 DMFLRWSDDLVTFLS-SHVSQE------------DFQITMDAFAAYNDFTRATIAARRAD---------------PTDDL  201 (398)
T ss_dssp             HHHHHHHHHHHHHHT-SCCCHH------------HHHHHHHHHHHHHHHHHHHHHHHHHS---------------CCSSH
T ss_pred             HHHHHHHHHHHhccC-cccchh------------hHHHHHHHHHHHHHHHHHHHHHHHhC---------------CCCCH
Confidence            334444333332210 111110            12234456677888888888887652               24689


Q ss_pred             HHHHhhc---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCcccccCCCC
Q 037522          286 LSRFMKK---KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLV  362 (541)
Q Consensus       286 l~~ll~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~  362 (541)
                      ++.|++.   +..++++++.+++..+++||+|||+.+++|++++|++||++|++|++|++                    
T Consensus       202 l~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~--------------------  261 (398)
T 2xkr_A          202 VSVLVSSEVDGERLSDDELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPS--------------------  261 (398)
T ss_dssp             HHHHHHCCBTTBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHSHHHHHHHHHCGG--------------------
T ss_pred             HHHHHHhhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCHH--------------------
Confidence            9999864   33599999999999999999999999999999999999999999998843                    


Q ss_pred             HHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccCCCCCCCCC
Q 037522          363 FEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDG  442 (541)
Q Consensus       363 ~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~  442 (541)
                              ||+|+|+|+||++|+++...|.+ .+++.++||.||||+.|+++.+++||||++| +||++|+||||.+   
T Consensus       262 --------~l~a~i~E~lRl~p~~~~~~R~~-~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~~---  328 (398)
T 2xkr_A          262 --------LLPGAIEEMLRWTAPVKNMCRVL-TADTEFHGTALCAGEKMMLLFESANFDEAVF-CEPEKFDVQRNPN---  328 (398)
T ss_dssp             --------GHHHHHHHHHHHHCSBCEEEEEE-SSCEEETTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTCSSC---
T ss_pred             --------HHHHHHHHHHhhcccccCcceEE-CCCeeECCEEECCCCEEEeChhhhcCChhhC-CCCCeeCCCCCCC---
Confidence                    78999999999999999744445 4555569999999999999999999999999 9999999999741   


Q ss_pred             CCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCCcccc-eeeeeEEecCCceeEEEeeCCC
Q 037522          443 NKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPGHRVE-QKMSLTLFMKYGLMMNVHPREL  517 (541)
Q Consensus       443 ~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~r~~  517 (541)
                               .++|||+|+|.|+|++||+.|++++++.|+++| ++++.++..+. ...+.......+++|++++|.+
T Consensus       329 ---------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~p~~r  396 (398)
T 2xkr_A          329 ---------SHLAFGFGTHFCLGNQLARLELSLMTERVLRRLPDLRLVADDSVLPLRPANFVSGLESMPVVFTPSPP  396 (398)
T ss_dssp             ---------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESCTTCCCCBCCCSSBCCBSCCEEECCCCCC
T ss_pred             ---------CCCcCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCceECCCcceecccCcccccCccceeEEecCCCC
Confidence                     389999999999999999999999999999999 59987443331 0234445667789999988764


No 47 
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00  E-value=1.5e-56  Score=442.00  Aligned_cols=371  Identities=18%  Similarity=0.219  Sum_probs=291.5

Q ss_pred             hhHHHHHHHHHHcCCcccccceeeecc-CCcceEEEecCChhhHHHHHhccCCCCCCChh--H-HH--HHHh-hccCcce
Q 037522           48 RLHDWISDNLRACGGTYQTCIFAIPVL-GRKQGLVTVTCDPKNVEHILKARFDNYPKGPT--W-QA--AFHD-LLGDGIF  120 (541)
Q Consensus        48 ~~~~~~~~~~~kyG~v~~~~~~~~~~~-~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~--~-~~--~~~~-~~g~~l~  120 (541)
                      +++.++.++ ++||++|+   +   ++ |+.+.+++  +||+.+++++.++  .|++++.  + ..  .+.. ..+.+++
T Consensus        20 ~p~~~~~~l-~~yGpv~~---~---~~~g~~~~vvv--~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~   88 (403)
T 3aba_A           20 LPPDGIADI-RAAAPVTR---A---TFTSGHEAWLV--TGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSLL   88 (403)
T ss_dssp             SCCTTHHHH-HHHCSEEE---E---ECTTSCEEEEE--CCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCCT
T ss_pred             ChhHHHHHH-HhcCCeee---e---ccCCCceEEEE--cCHHHHHHHHcCC--Ccccccccccccccccccccccccccc
Confidence            466677788 89999876   3   54 78889999  9999999999874  4666531  1 10  0111 1356788


Q ss_pred             ecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHH-HHHHHHHHHhhhccCCCCcc
Q 037522          121 NSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLL-LRMTFDNICGLAFGKDPQTL  199 (541)
Q Consensus       121 ~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~  199 (541)
                      ..+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+   .++++|+...+ ..+++++++. +||.+... 
T Consensus        89 ~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-  161 (403)
T 3aba_A           89 WQDEPEHTSDRKLLAKEFTVRRMQAL-RPNIQRIV-DEHLDAIEA---RGGPVDLVKTFANAVPSMVISD-LFGVPVER-  161 (403)
T ss_dssp             TCCTTHHHHHHHHHHHHSCHHHHHTT-HHHHHHHH-HHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG-
T ss_pred             cCCchhHHHHHHHHHhhcCHHHHHHH-HHHHHHHH-HHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCCCHHH-
Confidence            88999999999999999999999986 89999999 888887764   25689998766 5799999998 69987531 


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccccccccCC
Q 037522          200 SQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATT  279 (541)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~~  279 (541)
                           ...+......+..     ...+              .++..++.+.+.+++.+.++++++.              
T Consensus       162 -----~~~~~~~~~~~~~-----~~~~--------------p~~~~~~~~~~~~~~~~~i~~r~~~--------------  203 (403)
T 3aba_A          162 -----RAEFQDIAEAMMR-----VDQD--------------AAATEAAGMRLGGLLYQLVQERRAN--------------  203 (403)
T ss_dssp             -----HHHHHHHHHHHSB-----SSSC--------------HHHHHHHHHHHHHHHHHHHHHHHHS--------------
T ss_pred             -----HHHHHHHHHHHHh-----ccCc--------------HHHHHHHHHHHHHHHHHHHHHHHhC--------------
Confidence                 1222222221110     0000              0233456677888888888877643              


Q ss_pred             CCchhHHHHHhhc---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCccc
Q 037522          280 TPHDDLLSRFMKK---KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKW  356 (541)
Q Consensus       280 ~~~~~~l~~ll~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~  356 (541)
                       ...|+++.|++.   +..++++++.+++..+++||+|||+.+++|++++|++||++|++|++|++              
T Consensus       204 -~~~dll~~ll~~~~~~~~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~--------------  268 (403)
T 3aba_A          204 -PGDDLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLREDPS--------------  268 (403)
T ss_dssp             -CCSSHHHHHHTSCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG--------------
T ss_pred             -CCCCHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH--------------
Confidence             235899999864   33599999999999999999999999999999999999999999998731              


Q ss_pred             ccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccCCC
Q 037522          357 VEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPER  436 (541)
Q Consensus       357 ~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~R  436 (541)
                                    ||+|+|+|+||++|+++...+|.+.+++.++||.||||+.|+++.+++||||++| +||++|||||
T Consensus       269 --------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR  333 (403)
T 3aba_A          269 --------------LVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFV-EEPERFDITR  333 (403)
T ss_dssp             --------------GHHHHHHHHHHHHCSCTTCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTS
T ss_pred             --------------HHHHHHHHHHhcCCCcccccceEeCCCeEECCEEECCCCEEEechhhhCCChhhC-CCccccCCCC
Confidence                          7899999999999999955555555556669999999999999999999999999 9999999999


Q ss_pred             CCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCC-cccceeeeeEEecCCceeEEEee
Q 037522          437 WLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPG-HRVEQKMSLTLFMKYGLMMNVHP  514 (541)
Q Consensus       437 f~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~  514 (541)
                      |.            ..++|||+|+|.|+|++||+.|++++++.|+++| ++++.++ .++.+..+...++..+++|++++
T Consensus       334 ~~------------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~  401 (403)
T 3aba_A          334 RP------------APHLAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKPVEELRFRHDMVFYGVHELPVTWHH  401 (403)
T ss_dssp             CC------------CCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCTTBSSCCBSCCEEECCC
T ss_pred             CC------------CCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceecCCccccccccCcccCCcceeEEEecC
Confidence            83            2489999999999999999999999999999999 5998754 34445555566778899999988


Q ss_pred             CC
Q 037522          515 RE  516 (541)
Q Consensus       515 r~  516 (541)
                      |.
T Consensus       402 r~  403 (403)
T 3aba_A          402 HH  403 (403)
T ss_dssp             CC
T ss_pred             CC
Confidence            73


No 48 
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00  E-value=2.3e-56  Score=440.58  Aligned_cols=371  Identities=14%  Similarity=0.110  Sum_probs=289.9

Q ss_pred             hhhHHHHHHHHHHc--CCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChhHHH-HHHhhccCcceecC
Q 037522           47 KRLHDWISDNLRAC--GGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTWQA-AFHDLLGDGIFNSD  123 (541)
Q Consensus        47 ~~~~~~~~~~~~ky--G~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~~~-~~~~~~g~~l~~~~  123 (541)
                      .+++.++.+++++|  |++|+   +   .+++ +.++|  +||+.+++++++. ..|++++.... ......+.+++..+
T Consensus        19 ~~p~~~~~~l~~~Y~~Gpv~~---~---~~~~-~~~vv--~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~   88 (398)
T 4fb2_A           19 GTPHAFFEALRDEAETTPIGW---S---EAYG-GHWVV--AGYKEIQAVIQNT-KAFSNKGVTFPRYETGEFELMMAGQD   88 (398)
T ss_dssp             SSSHHHHHHHHHHHTTCSEEE---E---CGGG-CEEEE--CSHHHHHHHHTCC-SSEEGGGCSSSCC----CCCTTTTCC
T ss_pred             cChhHHHHHHHhcCCCCCeEE---e---cCCC-CEEEE--ccHHHHHHHHhCh-hhccCCcccccCCCCcccccCcccCC
Confidence            35889999999999  99876   2   4444 57888  9999999999664 67777654321 11111234567889


Q ss_pred             ChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHH-HHHHHHHHHhhhccCCCCccCCC
Q 037522          124 GDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLL-LRMTFDNICGLAFGKDPQTLSQG  202 (541)
Q Consensus       124 g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~  202 (541)
                      |+.|+++|+++.+.|+++.++.+ .+.+.+++ +.+++.+.+    ...+|+...+ ..+++++++. +||.+...    
T Consensus        89 g~~~~~~R~~~~~~f~~~~l~~~-~~~i~~~~-~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~----  157 (398)
T 4fb2_A           89 DPVHKKYRQLVAKPFSPEATDLF-TEQLRQST-NDLIDARIE----LGEGDAATWLANEIPARLTAI-LLGLPPED----  157 (398)
T ss_dssp             TTHHHHHHHHHHTTTCHHHHHTT-HHHHHHHH-HHHHHTTTT----TTEEEHCCCCCTTHHHHHHHH-HTTSCGGG----
T ss_pred             chHHHHHHHHHHHhhCHHHHHHH-HHHHHHHH-HHHHHHHhh----cCCccHHHHHHHHHHHHHHHH-HcCCCHHH----
Confidence            99999999999999999999986 89999988 777766643    3468876554 6899999999 68976431    


Q ss_pred             CCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccccccccCCCCc
Q 037522          203 LPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPH  282 (541)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~  282 (541)
                        ...+.+....+..        +            ....+..++.+.+.+++.+.++++++.               ..
T Consensus       158 --~~~~~~~~~~~~~--------~------------~~~~~~~~~~~~~~~~~~~~i~~r~~~---------------~~  200 (398)
T 4fb2_A          158 --GDTYRRWVWAITH--------V------------ENPEEGAEIFAELVAHARTLIAERRTN---------------PG  200 (398)
T ss_dssp             --HHHHHHHHHHHHH--------C------------CCHHHHHHHHHHHHHHHHHHHHHHHHS---------------CC
T ss_pred             --HHHHHHHHHHHhc--------C------------CCHHHHHHHHHHHHHHHHHHHHHHHhC---------------CC
Confidence              1233332222211        0            011234456678888888888887753               34


Q ss_pred             hhHHHHHhhc---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCcccccC
Q 037522          283 DDLLSRFMKK---KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEE  359 (541)
Q Consensus       283 ~~~l~~ll~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~  359 (541)
                      .|+++.|++.   +..++++++..++..+++||+|||+.+++|++++|+.||++|++|++|++                 
T Consensus       201 ~d~l~~ll~~~~~~~~l~~~~i~~~~~~l~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------  263 (398)
T 4fb2_A          201 NDIMSRVIMSKIDGESLSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPE-----------------  263 (398)
T ss_dssp             SSHHHHHHHCCBTTBCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-----------------
T ss_pred             CCHHHHHHHcccCCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------
Confidence            6899999863   23499999999999999999999999999999999999999999999853                 


Q ss_pred             CCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccCCCCCC
Q 037522          360 PLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLS  439 (541)
Q Consensus       360 ~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~  439 (541)
                                 +++|+|+|+||++|+++ ..|.+.+ ++.++||.||||+.|.++.+++||||++| +||++|+||||. 
T Consensus       264 -----------~l~a~i~E~lRl~p~~~-~~R~~~~-d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~-  328 (398)
T 4fb2_A          264 -----------LIPNAVDELLRFYGPAM-VGRLVTQ-EVTVGDITMKPGQTAMLWFPIASRDRSAF-DSPDNIVIERTP-  328 (398)
T ss_dssp             -----------GHHHHHHHHHHHHCCBC-EEEEECS-CEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCCS-
T ss_pred             -----------HHHHHHHHHHHhCCCcC-CCeeeCC-CEEECCEEECCCCEEEechHhhcCChhhC-CCcCeeCCCCCC-
Confidence                       57899999999999998 5555555 55559999999999999999999999999 999999999972 


Q ss_pred             CCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCCcccceeeeeEEecCCceeEEEeeCCCC
Q 037522          440 QDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPGHRVEQKMSLTLFMKYGLMMNVHPRELK  518 (541)
Q Consensus       440 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~  518 (541)
                                 ..++|||+|+|.|+|++||..|++++++.|+++| +|++.++............ ...++|++++|.+.
T Consensus       329 -----------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~-~~~lpv~~~~~~~~  396 (398)
T 4fb2_A          329 -----------NRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDPNKECEWLMGQVAG-MLHVPIIFPKGKRL  396 (398)
T ss_dssp             -----------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCCSCEECTTSCCEEECSSBCE-EEECEEECCCCCCC
T ss_pred             -----------CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEECCCCCceeccccccc-cceeEEEEcCCCCC
Confidence                       2489999999999999999999999999999999 9999877655444433333 45689999988764


Q ss_pred             C
Q 037522          519 P  519 (541)
Q Consensus       519 ~  519 (541)
                      +
T Consensus       397 s  397 (398)
T 4fb2_A          397 S  397 (398)
T ss_dssp             C
T ss_pred             C
Confidence            3


No 49 
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=1.1e-55  Score=436.86  Aligned_cols=371  Identities=20%  Similarity=0.227  Sum_probs=289.2

Q ss_pred             hhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChh--HHH--HHH-------hhcc
Q 037522           48 RLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPT--WQA--AFH-------DLLG  116 (541)
Q Consensus        48 ~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~--~~~--~~~-------~~~g  116 (541)
                      +++..+.++ ++||++|+   +   ++++.+.++|  +||+.+++++.++  .+++++.  +..  .+.       ...+
T Consensus        16 ~p~~~~~~l-~~yGpv~~---~---~~~~~~~vvv--~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (408)
T 1odo_A           16 DHHTEHRTL-REGGPATW---V---DVLGVQAWSV--SDPVLLKQLLTSS--DVSKDARAHWPAFGEVVGTWPLALWVAV   84 (408)
T ss_dssp             THHHHHHHH-HTTCSEEE---E---EETTEEEEEE--CCHHHHHHHTTCT--TEESCHHHHCTTHHHHTTTCTTTHHHHC
T ss_pred             ChHHHHHHH-HHhCCeEE---e---ccCCCCEEEE--CCHHHHHHHHcCC--Cccccccccccccccccccccccccccc
Confidence            578888888 99999876   3   4457788999  9999999999875  2455542  110  011       0134


Q ss_pred             CcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHH-HHHHHHHHhhhccCC
Q 037522          117 DGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLL-RMTFDNICGLAFGKD  195 (541)
Q Consensus       117 ~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fG~~  195 (541)
                      .+++..+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+. ..++++|+.+.+. .+++++++. +||.+
T Consensus        85 ~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~~-~~~~~~d~~~~~~~~~~~~vi~~-~~G~~  160 (408)
T 1odo_A           85 ENMFTAYGPNHRKLRRLVAPAFSARRVDAM-RPAVEAMV-TGLVDRLAEL-PAGEPVDLRQELAYPLPIAVIGH-LMGVP  160 (408)
T ss_dssp             CSGGGCCHHHHHHHHHTTGGGGSHHHHHHH-HHHHHHHH-HHHHHHHHHS-CTTSCEEHHHHTTTHHHHHHHHH-HHTCC
T ss_pred             ccccccCChHHHHHHHHhhhhcCHHHHHHH-HHHHHHHH-HHHHHHHHhh-cCCCCcchHHHHhhhhHHHHHHH-HhCCC
Confidence            678889999999999999999999999986 99999999 8888888643 2256899998887 599999996 78986


Q ss_pred             CCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhcccccccc
Q 037522          196 PQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGE  275 (541)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~  275 (541)
                      ...      ...+.+....+..    . ..              ..++..++.+.+.+++.++++++++.          
T Consensus       161 ~~~------~~~~~~~~~~~~~----~-~~--------------~~~~~~~~~~~~~~~~~~~i~~r~~~----------  205 (408)
T 1odo_A          161 QDR------RDGFRALVDGVFD----T-TL--------------DQAEAQANTARLYEVLDQLIAAKRAT----------  205 (408)
T ss_dssp             HHH------HHHHHHHHHHHHC----T-TC--------------CHHHHHHHHHHHHHHHHHHHHHHHHS----------
T ss_pred             HHH------HHHHHHHHHHHhc----c-cC--------------CHHHHHHHHHHHHHHHHHHHHHHhhC----------
Confidence            421      1222222221111    0 00              01233456677888888888877642          


Q ss_pred             ccCCCCchhHHHHHhhc------CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhc
Q 037522          276 AATTTPHDDLLSRFMKK------KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETR  349 (541)
Q Consensus       276 ~~~~~~~~~~l~~ll~~------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~  349 (541)
                           ...|+++.|++.      +..++++++.+++..+++||+|||+.+++|++++|++||++|++|++|+        
T Consensus       206 -----~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~--------  272 (408)
T 1odo_A          206 -----PGDDMTSLLIAARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGE--------  272 (408)
T ss_dssp             -----CCSSHHHHHHHHHCC-----CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTS--------
T ss_pred             -----CCCCHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH--------
Confidence                 235788888852      3459999999999999999999999999999999999999999999862        


Q ss_pred             CCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccC-CcccCCCCEEEEehhhhccCCCCccCC
Q 037522          350 GRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPT-GTFVPAGSTVTYSIYAIGRMKFIWGED  428 (541)
Q Consensus       350 ~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~-g~~Ip~Gt~v~~~~~~~h~d~~~~~~~  428 (541)
                                          +||+|||+|+||++|+++...+|.+.+++.++ ||.||||+.|.++.+++||||++| +|
T Consensus       273 --------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~d  331 (408)
T 1odo_A          273 --------------------VTWADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWH-ED  331 (408)
T ss_dssp             --------------------SCHHHHHHHHHHHSCSBSCEEEEEESSCEECTTSCEECTTCEEEECHHHHTTCTTTS-TT
T ss_pred             --------------------HHHHHHHHHHHhhCCCccCCcceEeCCCeEcCCCcEECCCCEEEeChhhhcCChhhc-CC
Confidence                                16899999999999999975555555555568 999999999999999999999999 99


Q ss_pred             CCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCC-cccceeeeeEEecCC
Q 037522          429 CLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPG-HRVEQKMSLTLFMKY  506 (541)
Q Consensus       429 p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~  506 (541)
                      |++|+|||+            +..++|||+|+|.|+|++||+.|++++++.|+++| ++++..+ .++.+..+...++..
T Consensus       332 p~~F~PeR~------------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  399 (408)
T 1odo_A          332 ADTFDATRT------------VKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLADPAEELPPVPSLISNGHQ  399 (408)
T ss_dssp             TTSCCTTCS------------CCCCCTTCSSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESCTTSCCCBCSCSSBCCBS
T ss_pred             ccccCCCCC------------CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcceecCCccccccccCccccCcc
Confidence            999999993            12489999999999999999999999999999999 7998643 455555566677788


Q ss_pred             ceeEEEee
Q 037522          507 GLMMNVHP  514 (541)
Q Consensus       507 ~~~v~~~~  514 (541)
                      +++|+++|
T Consensus       400 ~l~v~~~~  407 (408)
T 1odo_A          400 RLPVLLHA  407 (408)
T ss_dssp             CCEEECC-
T ss_pred             cceEEecC
Confidence            99998864


No 50 
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00  E-value=7.4e-56  Score=439.45  Aligned_cols=376  Identities=16%  Similarity=0.169  Sum_probs=291.0

Q ss_pred             hhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChh-----HHHH--HHhh--c-cC
Q 037522           48 RLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPT-----WQAA--FHDL--L-GD  117 (541)
Q Consensus        48 ~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~-----~~~~--~~~~--~-g~  117 (541)
                      +++.++.++ ++||++|+       + ++.+.++|  +||+.+++++.++ . |++++.     +...  +..+  + +.
T Consensus        27 ~p~~~~~~l-~~~Gpv~~-------~-~~~~~vvv--~~~~~v~~vl~~~-~-f~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (419)
T 1q5d_A           27 DPFPAIERL-REATPIFY-------W-DEGRSWVL--TRYHDVSAVFRDE-R-FAVSREEWESSAEYSSAIPELSDMKKY   93 (419)
T ss_dssp             CCHHHHHHH-HHHCSEEE-------E-TTTTEEEE--CSHHHHHHHHTCT-T-EECCGGGSTTHHHHHHSSGGGHHHHHH
T ss_pred             ChHHHHHHH-HhhCCccc-------c-CCCCEEEE--ecHHHHHHHHcCC-C-ccccccccccccccccccchhhhhccc
Confidence            578888888 78999732       3 56788999  9999999999987 4 888761     2211  1122  1 55


Q ss_pred             cceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHH-HHHHHHHHHHhhhccCCC
Q 037522          118 GIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDL-LLRMTFDNICGLAFGKDP  196 (541)
Q Consensus       118 ~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~-~~~~~~~~~~~~~fG~~~  196 (541)
                      +++..+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+    .+++|+... +..+++++++.+ ||.+.
T Consensus        94 ~l~~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~----~~~~d~~~~~~~~~~~~vi~~~-fG~~~  166 (419)
T 1q5d_A           94 GLFGLPPEDHARVRKLVNPSFTSRAIDLL-RAEIQRTV-DQLLDARSG----QEEFDVVRDYAEGIPMRAISAL-LKVPA  166 (419)
T ss_dssp             STTTSCHHHHHHHHHHHGGGGSHHHHGGG-HHHHHHHH-HHHHHHHTT----SSCEETTTTTGGGSHHHHHHHH-TTCCG
T ss_pred             ccccCCchHHHHHHHHHHHhcCHHHHHHH-HHHHHHHH-HHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH-hCCCH
Confidence            67888999999999999999999999886 89999999 878777753    237998864 589999999998 99875


Q ss_pred             CccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccccccc
Q 037522          197 QTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEA  276 (541)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~  276 (541)
                      ..      ...+.+....+..... ...+|     +    .....++..++.+.+.+++.+.++++++.           
T Consensus       167 ~~------~~~~~~~~~~~~~~~~-~~~~P-----~----~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----------  219 (419)
T 1q5d_A          167 EC------DEKFRRFGSATARALG-VGLVP-----R----VDEETKTLVASVTEGLALLHGVLDERRRN-----------  219 (419)
T ss_dssp             GG------HHHHHHHHHHHHHHTT-TTTSS-----C----CCSCHHHHHHHHHHHHHHHHHHHHHHHHS-----------
T ss_pred             HH------HHHHHHHHHHHHHhcc-ccccc-----C----ChHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------
Confidence            42      1234433333322110 00011     0    00112234456677888888888877642           


Q ss_pred             cCCCCch-hHHHHHhhc---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCC
Q 037522          277 ATTTPHD-DLLSRFMKK---KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRD  352 (541)
Q Consensus       277 ~~~~~~~-~~l~~ll~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~  352 (541)
                          ... |+++.|++.   +..++++++.+++..+++||+|||+.+++|++++|++||++|++|++|+           
T Consensus       220 ----~~~~dll~~ll~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~-----------  284 (419)
T 1q5d_A          220 ----PLENDVLTMLLQAEADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEP-----------  284 (419)
T ss_dssp             ----CCSSCHHHHHHHHHHSSTTCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG-----------
T ss_pred             ----CCCCCHHHHHHhhhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH-----------
Confidence                234 888888863   4459999999999999999999999999999999999999999999872           


Q ss_pred             CcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCc
Q 037522          353 VSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEF  432 (541)
Q Consensus       353 ~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F  432 (541)
                                       .||+|||+|+||++|+++...+|.+.+++.++||.||||+.|.++.+++||||++| +||++|
T Consensus       285 -----------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F  346 (419)
T 1q5d_A          285 -----------------GLMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVF-SRPDVF  346 (419)
T ss_dssp             -----------------GGHHHHHHHHHHHSCSBSSEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSC
T ss_pred             -----------------HHHHHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEecHHHhcCChhhC-CChhhc
Confidence                             27999999999999999955555555556669999999999999999999999999 999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCCcccceeeeeEEecCCceeEE
Q 037522          433 KPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPGHRVEQKMSLTLFMKYGLMMN  511 (541)
Q Consensus       433 ~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~  511 (541)
                      +|||+-            ..++|||+|+|.|+|++||+.|++++++.|+++| ++++.++.  .+..+....+..+++|+
T Consensus       347 ~PeR~~------------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~l~v~  412 (419)
T 1q5d_A          347 DVRRDT------------SASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKETP--VFGYHPAFRNIESLNVI  412 (419)
T ss_dssp             CTTSCC------------TTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSCC--EECCCSSBCCEEECEEE
T ss_pred             CCCCCC------------CCCCCCCCCCCcCccHHHHHHHHHHHHHHHHHhCCCeEECCCc--ccccccccCCCceeEEE
Confidence            999941            2489999999999999999999999999999999 79997653  33344556677889999


Q ss_pred             EeeCCC
Q 037522          512 VHPREL  517 (541)
Q Consensus       512 ~~~r~~  517 (541)
                      +++|..
T Consensus       413 ~~~r~~  418 (419)
T 1q5d_A          413 LKPSKA  418 (419)
T ss_dssp             SSCC--
T ss_pred             EecCCC
Confidence            998863


No 51 
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00  E-value=3.1e-55  Score=433.12  Aligned_cols=366  Identities=20%  Similarity=0.229  Sum_probs=288.5

Q ss_pred             hhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChhH--H----H-----HH-Hh--
Q 037522           48 RLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTW--Q----A-----AF-HD--  113 (541)
Q Consensus        48 ~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~--~----~-----~~-~~--  113 (541)
                      +++.++.++ ++||++|+   +   ++++.+.+++  ++|+.+++++.++  .|++++..  .    .     .+ ..  
T Consensus        15 ~p~~~~~~l-~~yGpv~~---~---~~~~~~~vvv--~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (404)
T 1z8o_A           15 DWYRTYAEL-RETAPVTP---V---RFLGQDAWLV--TGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVR   83 (404)
T ss_dssp             SHHHHHHHH-HHHCSEEE---E---EETTEEEEEE--CSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHH
T ss_pred             CcHHHHHHH-HhcCCeee---e---cCCCceEEEE--cCHHHHHHHHcCC--Cccccccccccccccccccccccccchh
Confidence            578888888 99999876   3   5577888999  9999999999875  56665432  1    0     11 11  


Q ss_pred             -hccCcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHH-HHHHHHHHHhhh
Q 037522          114 -LLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLL-LRMTFDNICGLA  191 (541)
Q Consensus       114 -~~g~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~  191 (541)
                       ..+.+++..+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+    ++++|+...+ ..+++++++.+ 
T Consensus        84 ~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~~-  156 (404)
T 1z8o_A           84 NYFATNMGTSDPPTHTRLRKLVSQEFTVRRVEAM-RPRVEQIT-AELLDEVGD----SGVVDIVDRFAHPLPIKVICEL-  156 (404)
T ss_dssp             HHHSSSGGGCCTTHHHHHHHHHHTTSCHHHHHHT-HHHHHHHH-HHHHHTSCS----SSEEEHHHHTTTHHHHHHHHHH-
T ss_pred             hhcccccccCCCcHHHHHHHHHHHhhCHHHHHHH-HHHHHHHH-HHHHHhhhh----cCCcchHHHHhHHHHHHHHHHH-
Confidence             246778888999999999999999999999886 89999888 777776642    4689998765 68999999984 


Q ss_pred             ccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhcccc
Q 037522          192 FGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDR  271 (541)
Q Consensus       192 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~  271 (541)
                      ||.+...      ...+.+....+..     ...|.             .++..++.+.+.+++.+.++++++.      
T Consensus       157 ~G~~~~~------~~~~~~~~~~~~~-----~~~p~-------------~~~~~~~~~~~~~~~~~~i~~r~~~------  206 (404)
T 1z8o_A          157 LGVDEKY------RGEFGRWSSEILV-----MDPER-------------AEQRGQAAREVVNFILDLVERRRTE------  206 (404)
T ss_dssp             TTCCGGG------TTTHHHHHHHHHC-----CCGGG-------------HHHHHHHHHHHHHHHHHHHHHHHHS------
T ss_pred             hCCCHHH------HHHHHHHHHHHhc-----cCChh-------------HHHHHHHHHHHHHHHHHHHHHHHhC------
Confidence            9987542      1334444333221     11110             1233456677888888888877642      


Q ss_pred             ccccccCCCCchhHHHHHhhc----CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhh
Q 037522          272 EQGEAATTTPHDDLLSRFMKK----KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLE  347 (541)
Q Consensus       272 ~~~~~~~~~~~~~~l~~ll~~----~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~  347 (541)
                               ...|+++.|++.    +..++++++.+++..+++||+|||+.+++|++++|++||++|++|++|++     
T Consensus       207 ---------~~~dll~~ll~~~~~~~~~l~~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~-----  272 (404)
T 1z8o_A          207 ---------PGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPS-----  272 (404)
T ss_dssp             ---------CCSSHHHHHHHCEETTTEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-----
T ss_pred             ---------CCCCHHHHHHhhhcccCCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH-----
Confidence                     235899999864    23489999999999999999999999999999999999999999998731     


Q ss_pred             hcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccC
Q 037522          348 TRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGE  427 (541)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~  427 (541)
                                             ||+|+|+|+||++|+++...|.+ .+++.++||.||||+.|.++.+++||||++| +
T Consensus       273 -----------------------~l~a~i~E~lRl~p~~~~~~R~~-~~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~-~  327 (404)
T 1z8o_A          273 -----------------------ALPNAVEEILRYIAPPETTTRFA-AEEVEIGGVAIPQYSTVLVANGAANRDPKQF-P  327 (404)
T ss_dssp             -----------------------GHHHHHHHHHHHTCSSCCEEEEE-SSCEEETTEEECTTCEEEECHHHHTTCTTTS-S
T ss_pred             -----------------------hHHHHHHHHHHhcCCccCcceEE-CCCEEECCEEECCCCEEEecchhhcCCcccC-C
Confidence                                   68999999999999999544444 4555569999999999999999999999999 9


Q ss_pred             CCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCC-cccceeeeeEEecC
Q 037522          428 DCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPG-HRVEQKMSLTLFMK  505 (541)
Q Consensus       428 ~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~  505 (541)
                      ||++|+||||.            ..++|||+|+|.|+|++||+.|++++++.|+++| ++++.++ .++.+..+.+.+..
T Consensus       328 dP~~F~PeR~~------------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~  395 (404)
T 1z8o_A          328 DPHRFDVTRDT------------RGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLLRGI  395 (404)
T ss_dssp             STTSCCTTSCC------------TTCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCCCCCSSSCCC
T ss_pred             ChhhcCCCCCC------------CCccCCCCCCccCCcHHHHHHHHHHHHHHHHHhCCCcEecCCCCcceeccccccCCc
Confidence            99999999983            2489999999999999999999999999999999 4998754 34445555556667


Q ss_pred             CceeEEE
Q 037522          506 YGLMMNV  512 (541)
Q Consensus       506 ~~~~v~~  512 (541)
                      .+++|++
T Consensus       396 ~~l~v~~  402 (404)
T 1z8o_A          396 DHLPVRL  402 (404)
T ss_dssp             SCCEEET
T ss_pred             ceeEEEe
Confidence            7888775


No 52 
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00  E-value=1.2e-55  Score=438.07  Aligned_cols=375  Identities=15%  Similarity=0.125  Sum_probs=281.7

Q ss_pred             hhHHHHHHHHHHcCCcccccceeeeccC--CcceEEEecCChhhHHHHHhccCCCCCCChh--------HHHH-------
Q 037522           48 RLHDWISDNLRACGGTYQTCIFAIPVLG--RKQGLVTVTCDPKNVEHILKARFDNYPKGPT--------WQAA-------  110 (541)
Q Consensus        48 ~~~~~~~~~~~kyG~v~~~~~~~~~~~~--~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~--------~~~~-------  110 (541)
                      +++.++.++. +||++|+   +   .+|  +.+.++|  +||+.+++++.++  .|++++.        +...       
T Consensus        21 ~p~~~~~~l~-~~Gpv~~---~---~~g~~~~~~~vv--~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~   89 (425)
T 2z3t_A           21 DPYPVYRRYR-EAAPVHR---T---ASGPGKPDTYYV--FTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRA   89 (425)
T ss_dssp             CCHHHHHHHH-HHCSEEE---E---CCCSSCCCEEEE--CSHHHHHHHHHCT--TEESSCCCC---------------CH
T ss_pred             ChHHHHHHHH-hcCCeEe---c---cccCCCCCeEEE--cCHHHHHHHHcCC--Cccccccccccccccccccccccccc
Confidence            4677777775 5999866   2   555  5778899  9999999999874  6777642        1111       


Q ss_pred             HHhhccCcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHH-HHHHHHHHHh
Q 037522          111 FHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLL-LRMTFDNICG  189 (541)
Q Consensus       111 ~~~~~g~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~  189 (541)
                      +..+.+.+++..+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+   . +++|+...+ ..+++++++.
T Consensus        90 ~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~---~-g~~dl~~~~~~~~~~~vi~~  163 (425)
T 2z3t_A           90 LRTVVENWLVFLDPPHHTELRSLLTTEFSPSIVTGL-RPRIAELA-SALLDRLRA---Q-RRPDLVEGFAAPLPILVISA  163 (425)
T ss_dssp             HHHHHTTCGGGCCHHHHHHHHHHHHGGGSHHHHHHH-HHHHHHHH-HHHHHHHTT---S-SSCBHHHHTTTHHHHHHHHH
T ss_pred             cccccccccccCCchHHHHHHHHHHHhhCHHHHHHH-HHHHHHHH-HHHHHHHHh---c-CCccHHHHHHHHHHHHHHHH
Confidence            122334788888999999999999999999999986 89999999 888777753   2 379998754 7899999999


Q ss_pred             hhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhcc
Q 037522          190 LAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASR  269 (541)
Q Consensus       190 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~  269 (541)
                      + ||.+...      ...+.+....+....   ..+|  +       +....++..++.+.+.+++.+.++++++.    
T Consensus       164 ~-~G~~~~~------~~~~~~~~~~~~~~~---~~~~--~-------~~~~~~~~~~~~~~~~~~~~~~i~~r~~~----  220 (425)
T 2z3t_A          164 L-LGIPEED------HTWLRANAVALQEAS---TTRA--R-------DGRGYARAEAASQEFTRYFRREVDRRGGD----  220 (425)
T ss_dssp             H-HTCCGGG------HHHHHHHHHHHHTTC---TTCC--C----------HHHHHHHHHHHHHHHHHHHHCC--------
T ss_pred             H-hCCCHHH------HHHHHHHHHHHHhhc---cccC--C-------CHHHHHHHHHHHHHHHHHHHHHHHHHHhC----
Confidence            8 9987532      123333322221100   0001  0       00012233456677777888877766542    


Q ss_pred             ccccccccCCCCchhHHHHHhhc---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhh
Q 037522          270 DREQGEAATTTPHDDLLSRFMKK---KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLL  346 (541)
Q Consensus       270 ~~~~~~~~~~~~~~~~l~~ll~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~  346 (541)
                                 ...|+++.|++.   +..++++++.+++..+++||+|||+.+++|++++|+.||++|++|++|++    
T Consensus       221 -----------~~~dll~~ll~~~~~~~~ls~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~----  285 (425)
T 2z3t_A          221 -----------DRDDLLTLLVRARDTGSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPE----  285 (425)
T ss_dssp             --------------CHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGG----
T ss_pred             -----------CCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhChH----
Confidence                       235788888863   34599999999999999999999999999999999999999999998732    


Q ss_pred             hhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCcc
Q 037522          347 ETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWG  426 (541)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~  426 (541)
                                              ||+|+|+|+||++|+++ ..+|.+.+++.++||.||||+.|+++.+++||||++| 
T Consensus       286 ------------------------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-  339 (425)
T 2z3t_A          286 ------------------------STPAAVEELMRYDPPVQ-AVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARF-  339 (425)
T ss_dssp             ------------------------GHHHHHHHHHHHSCSBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTS-
T ss_pred             ------------------------hHHHHHHHHHHhCCccc-CcceEeCCCeeECCEEECCCCEEEeChhhhCCCcccc-
Confidence                                    78999999999999999 4445444555569999999999999999999999999 


Q ss_pred             CCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCCcccceeeeeEEecC
Q 037522          427 EDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPGHRVEQKMSLTLFMK  505 (541)
Q Consensus       427 ~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~  505 (541)
                      +||++|+||||.            ..++|||+|+|.|+|++||+.|++++++.|+++| +++ .++....+..+.+..+.
T Consensus       340 ~dP~~F~PeR~~------------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~-~~~~~~~~~~~~~~~~~  406 (425)
T 2z3t_A          340 PDPDVLDVHRAA------------ERQVGFGLGIHYCLGATLARAEAEIGLRALLDGIPALG-RGAHEVEYADDMVFHGP  406 (425)
T ss_dssp             SSTTSCCTTSCS------------SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCGGGG-SSCEEEEECSCSSBCCE
T ss_pred             CCcccCCCCCCC------------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcCc-cCCCccccccccccCCc
Confidence            999999999995            1389999999999999999999999999999999 899 65432233444555666


Q ss_pred             CceeEEEeeCC
Q 037522          506 YGLMMNVHPRE  516 (541)
Q Consensus       506 ~~~~v~~~~r~  516 (541)
                      .+++|++++..
T Consensus       407 ~~lpv~~~~~~  417 (425)
T 2z3t_A          407 TRLLLDLPDAA  417 (425)
T ss_dssp             EEEEECCC---
T ss_pred             ceeeEEecchh
Confidence            78888876654


No 53 
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00  E-value=4.8e-56  Score=438.67  Aligned_cols=369  Identities=14%  Similarity=0.139  Sum_probs=287.0

Q ss_pred             hhHHHHHHHHHHcCCcccccceeeeccC-C-cceEEEecCChhhHHHHHhccCCCCCCChhHHH---HHHhhc---cCcc
Q 037522           48 RLHDWISDNLRACGGTYQTCIFAIPVLG-R-KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQA---AFHDLL---GDGI  119 (541)
Q Consensus        48 ~~~~~~~~~~~kyG~v~~~~~~~~~~~~-~-~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~~~---~~~~~~---g~~l  119 (541)
                      +++.++.+++ +||++|+   +   .++ + .+.++|  ++|+.+++|+.+  ..|.+++....   .+..+.   +.++
T Consensus        28 ~p~~~~~~l~-~~Gpv~~---~---~~~~g~~~~~vv--~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~l   96 (411)
T 2dkk_A           28 EFDPVLAELM-REGPLTR---V---RLPHGEGWAWLA--TRYDDVKAITND--PRFGRAEVTQRQITRLAPHFKPRPGSL   96 (411)
T ss_dssp             CCCHHHHHHH-TTCSEEE---E---ECSBSBSCEEEE--CSHHHHHHHTTC--TTEESGGGGGSCBCBSSSCCCCCTTCS
T ss_pred             cccHHHHHHH-hcCCeEe---e---ecCCCceeEEEE--cCHHHHHHHHcC--CCcccCCCCCCCccccccchhcccccc
Confidence            3457777776 8999876   2   333 3 678999  999999999987  36777654321   111222   5678


Q ss_pred             eecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHH-HHHHHHHHhhhccCCCCc
Q 037522          120 FNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLL-RMTFDNICGLAFGKDPQT  198 (541)
Q Consensus       120 ~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fG~~~~~  198 (541)
                      +..+|+.|+++|+++++.|+++.++.+ .+.+.+.+ +.+++.+.+   .+.++|+...+. .+++++++. +||.+...
T Consensus        97 ~~~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~---~g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~  170 (411)
T 2dkk_A           97 AFADQPDHNRLRRAVAGAFTVGATKRL-RPRAQEIL-DGLVDGILA---EGPPADLVERVLEPFPIAVVSE-VMGVPAAD  170 (411)
T ss_dssp             TTCCTTHHHHHHHHHGGGSSHHHHHHH-HHHHHHHH-HHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHTCCSSH
T ss_pred             ccCCchHHHHHHHHhhHhhCHHHHHHH-HHHHHHHH-HHHHHHHHh---cCCCeehHHHHHHHHHHHHHHH-HhCCCHHH
Confidence            888999999999999999999999997 99999999 888887764   245799997775 799999998 59987531


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccccccccC
Q 037522          199 LSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAAT  278 (541)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~  278 (541)
                            ...+......       .....            ...++..++.+.+.+++.++++++++.             
T Consensus       171 ------~~~~~~~~~~-------~~~~~------------~~~~~~~~~~~~l~~~~~~~i~~r~~~-------------  212 (411)
T 2dkk_A          171 ------RERVHSWTRQ-------IISTS------------GGAEAAERAKRGLYGWITETVRARAGS-------------  212 (411)
T ss_dssp             ------HHHHHHHHGG-------GCSSC------------SCSHHHHHHHHHHHHHHHHHHHTTTTC-------------
T ss_pred             ------HHHHHHHHHH-------HHhcc------------chHHHHHHHHHHHHHHHHHHHHHHHhC-------------
Confidence                  1122211111       00000            012233455667777777777765421             


Q ss_pred             CCCchhHHHHHhhc--CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCccc
Q 037522          279 TTPHDDLLSRFMKK--KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKW  356 (541)
Q Consensus       279 ~~~~~~~l~~ll~~--~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~  356 (541)
                        ...|+++.|++.  +..++++++.+++..+++|| |||+.+++|++++|++||++|++|++|++              
T Consensus       213 --~~~dll~~ll~~~~~~~ls~~el~~~~~~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~~--------------  275 (411)
T 2dkk_A          213 --EGGDVYSMLGAAVGRGEVGETEAVGLAGPLQIGG-EAVTHNVGQMLYLLLTRRELMARMRERPG--------------  275 (411)
T ss_dssp             --CSSCHHHHHHHHHHTTSSCTTSHHHHHHHHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCTT--------------
T ss_pred             --CCCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCHH--------------
Confidence              335788888863  44699999999999999999 99999999999999999999999998842              


Q ss_pred             ccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCC-ccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccCC
Q 037522          357 VEEPLVFEEVDRLIYLKAALSETLRLYPSVPQD-SKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPE  435 (541)
Q Consensus       357 ~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~-~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~  435 (541)
                                    ||+++|+|+||++|+++.. ..|.+.+++.++||.||||+.|.++.+++||||++| +||++|||+
T Consensus       276 --------------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f-~dp~~F~Pe  340 (411)
T 2dkk_A          276 --------------ARGTALDELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVF-PDPDRIDLD  340 (411)
T ss_dssp             --------------CCHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCCS
T ss_pred             --------------HHHHHHHHHHhhCCccccCccceEECCCEEECCEEECCCCEEEeChhhhcCChhhC-CCCCCCCCC
Confidence                          6899999999999999944 444444555569999999999999999999999999 999999999


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCC-cccceeeeeEEecCCceeEEEe
Q 037522          436 RWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPG-HRVEQKMSLTLFMKYGLMMNVH  513 (541)
Q Consensus       436 Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~  513 (541)
                      ||.            ..++|||+|+|.|+|++||++|++++++.|+++| ++++.++ .++.+..+.......+++|+++
T Consensus       341 R~~------------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~  408 (411)
T 2dkk_A          341 RDP------------NPHLAYGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAEQVAWRRKTMIRGPRTLPCTWH  408 (411)
T ss_dssp             CSS------------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGCCBCCSSSBCCBSCCEEECC
T ss_pred             CCC------------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCCCcEECCCccccccccCcccCCcceeEEEec
Confidence            995            2489999999999999999999999999999999 8999765 3444554556677789999998


Q ss_pred             eC
Q 037522          514 PR  515 (541)
Q Consensus       514 ~r  515 (541)
                      +|
T Consensus       409 ~R  410 (411)
T 2dkk_A          409 HH  410 (411)
T ss_dssp             CC
T ss_pred             cC
Confidence            87


No 54 
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00  E-value=4.1e-55  Score=430.64  Aligned_cols=362  Identities=15%  Similarity=0.194  Sum_probs=284.2

Q ss_pred             hhHHHHHHHHHHcCCcccccceeeecc-CCcceEEEecCChhhHHHHHhccCCCCCCChhHHHHHHh-hccCc--ceecC
Q 037522           48 RLHDWISDNLRACGGTYQTCIFAIPVL-GRKQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAFHD-LLGDG--IFNSD  123 (541)
Q Consensus        48 ~~~~~~~~~~~kyG~v~~~~~~~~~~~-~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~~~~~~~-~~g~~--l~~~~  123 (541)
                      +++.++.++ ++||++|+   +   .+ ++.+.++|  +||+.+++++.++  .|.+++.....+.. ..+.+  ++..+
T Consensus        27 ~p~~~~~~l-~~yGpv~~---~---~~~~~~~~vvv--~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~l~~~~   95 (404)
T 2xbk_A           27 KLSPLLRAL-QDRGPIHR---V---RTPAGDEAWLV--TRHAELKQLLHDE--RIGRTHPDPPSAAQYVRSPFLDLLISD   95 (404)
T ss_dssp             BCCHHHHHH-HHHCSEEE---E---ECTTSCEEEEE--CSHHHHHHHTTCT--TEESBCSSGGGSCCSSCCHHHHTTCBC
T ss_pred             CccHHHHHH-HhhCCEee---e---ccCCCceEEEE--cCHHHHHHHHcCC--CCCCCccccccCCcccccccccceeeC
Confidence            467788888 89999876   3   43 67889999  9999999999874  46665433211112 13445  77889


Q ss_pred             C------hhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHH-HHHHHHHHHhhhccCCC
Q 037522          124 G------DTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLL-LRMTFDNICGLAFGKDP  196 (541)
Q Consensus       124 g------~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~  196 (541)
                      |      +.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+..   .++++|+...+ ..+++++++. +||.+.
T Consensus        96 g~~~~~~~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G~~~  169 (404)
T 2xbk_A           96 ADAESGRRQHAETRRLLTPLFSARRVLEM-QPKVEEAA-DTLLDAFIA---QGPPGDLHGELTVPFALTVLCE-VIGVPP  169 (404)
T ss_dssp             SCHHHHHHHHHHHHHHHGGGGCHHHHHHH-HHHHHHHH-HHHHHHHHH---TCSSEEHHHHTHHHHHHHHHHH-HHTCCG
T ss_pred             CCCCCCCchHHHHHHHhhhhcCHHHHHHH-HHHHHHHH-HHHHHHHHh---cCCCeeHHHHHHHHHHHHHHHH-HhCCCH
Confidence            9      9999999999999999999986 99999999 888887763   35589998766 5799999997 789865


Q ss_pred             CccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccccccc
Q 037522          197 QTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEA  276 (541)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~  276 (541)
                      ..      ...+.+....+..     ...+    +           +..++.+.+.+++.+.++++++.           
T Consensus       170 ~~------~~~~~~~~~~~~~-----~~~~----p-----------~~~~~~~~~~~~~~~~i~~r~~~-----------  212 (404)
T 2xbk_A          170 QR------RAELTTLLAGIAK-----LDDR----E-----------GAVRAQDDLFGYVAGLVEHKRAE-----------  212 (404)
T ss_dssp             GG------HHHHHHHHHHHTB-----SSCH----H-----------HHHHHHHHHHHHHHHHHHHHHHS-----------
T ss_pred             HH------HHHHHHHHHHHHh-----ccCc----H-----------HHHHHHHHHHHHHHHHHHHHHhC-----------
Confidence            31      1223322221110     0000    0           23446677888888888877643           


Q ss_pred             cCCCCchhHHHHHhhcCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCccc
Q 037522          277 ATTTPHDDLLSRFMKKKESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKW  356 (541)
Q Consensus       277 ~~~~~~~~~l~~ll~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~  356 (541)
                          ...|+++.| +++ .++++++.+++..+++||+|||+.+++|++++|+.||++|++|++|++              
T Consensus       213 ----~~~dll~~l-~~~-~ls~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~--------------  272 (404)
T 2xbk_A          213 ----PGPDIISRL-NDG-ELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD--------------  272 (404)
T ss_dssp             ----CCSSHHHHH-HSS-SCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHH--------------
T ss_pred             ----CCCCHHHHh-hcC-CCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHH--------------
Confidence                235788888 544 699999999999999999999999999999999999999999999853              


Q ss_pred             ccCCCCHHhhhcchhHHHHHhhhhcCCCCCC--CCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccC
Q 037522          357 VEEPLVFEEVDRLIYLKAALSETLRLYPSVP--QDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKP  434 (541)
Q Consensus       357 ~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~--~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p  434 (541)
                                    ||+|||+|+||++|+++  ...|.+. +++.++||.||||+.|.++.+++||||++| +||++|+|
T Consensus       273 --------------~l~a~i~E~lRl~p~~~~~~~~R~~~-~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~P  336 (404)
T 2xbk_A          273 --------------VMARAVEEVLRTARAGGSVLPPRYAS-EDMEFGGVTIRAGDLVLFDLGLPNFDERAF-TGPEEFDA  336 (404)
T ss_dssp             --------------HHHHHHHHHHHHSCSSCCBCSCEEES-SCEEETTEEECTTCEEECBTHHHHTCTTTS-SSTTSCCT
T ss_pred             --------------HHHHHHHHHHHhCCCccccccceeEC-CCeeECCEEECCCCEEEeChHHhcCChhhC-CCccccCC
Confidence                          68999999999999999  4555554 555569999999999999999999999999 99999999


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCC-cccceeeeeEEecCCceeEE
Q 037522          435 ERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPG-HRVEQKMSLTLFMKYGLMMN  511 (541)
Q Consensus       435 ~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~  511 (541)
                      |||.            ..++|||+|+|.|+|++||+.|++++++.|+++| ++++.++ .++.+..+...+...+++|+
T Consensus       337 eR~~------------~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~  403 (404)
T 2xbk_A          337 ARTP------------NPHLTFGHGIWHCIGAPLARLELRTMFTKLFTRLPELRPELPVEQLRLKEGQLSGGFAELRVV  403 (404)
T ss_dssp             TCSS------------CCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCSSBTTCCBSCCEEE
T ss_pred             CCCC------------CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCcceecCCCCcceeccCcccCCcceeeee
Confidence            9983            2489999999999999999999999999999999 6998764 34445555555666677765


No 55 
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00  E-value=9e-55  Score=432.91  Aligned_cols=373  Identities=15%  Similarity=0.139  Sum_probs=287.2

Q ss_pred             hhHHHHHHHHHHcCCcccccceeeeccC-------CcceEEEecCChhhHHHHHhccCCCCCCChhH--HHHHHh--hcc
Q 037522           48 RLHDWISDNLRACGGTYQTCIFAIPVLG-------RKQGLVTVTCDPKNVEHILKARFDNYPKGPTW--QAAFHD--LLG  116 (541)
Q Consensus        48 ~~~~~~~~~~~kyG~v~~~~~~~~~~~~-------~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~--~~~~~~--~~g  116 (541)
                      +++.++.++. +||++|+   +   .++       +.+.++|  +||+.+++++.++ ..|++++..  ...+..  ..+
T Consensus        45 ~p~~~~~~l~-~~Gpv~~---~---~~~~~~~~~~g~~~vvv--~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~  114 (435)
T 2wm5_A           45 VRDGAFATLR-REAPISF---W---PTIELPGFVAGNGHWAL--TKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYF  114 (435)
T ss_dssp             HHHHHHHHHH-HHCSEEE---E---CCCCC---CCCCCEEEE--CSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHH
T ss_pred             ChhHHHHHHH-hcCCeEe---c---ccccccccCCCCCeEEE--cCHHHHHHHHcCc-ccccCccccccCccccchhhhc
Confidence            5778888885 7999876   2   343       5578889  9999999999986 567776521  100111  125


Q ss_pred             CcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHH-HHHHHHHHHhhhccCC
Q 037522          117 DGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLL-LRMTFDNICGLAFGKD  195 (541)
Q Consensus       117 ~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~  195 (541)
                      .+++..+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+.. ++.++|+.+.+ ..+++++++.+ ||.+
T Consensus       115 ~~l~~~dg~~h~~~R~~l~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~~~-~~~~vd~~~~~~~~~~~~vi~~~-~G~~  190 (435)
T 2wm5_A          115 GSMIVLDDPRHQRLRSIVSRAFTPKVVARI-EAAVRDRA-HRLVSSMIANN-PDRQADLVSELAGPLPLQIICDM-MGIP  190 (435)
T ss_dssp             HGGGGCCTTHHHHHHHHHHHTCCHHHHHHH-HHHHHHHH-HHHHHHHHHHC-TTSEEEHHHHTTTHHHHHHHHHH-HTCC
T ss_pred             cccccCCcHHHHHHHHHhHHhhCHHHHHHH-HHHHHHHH-HHHHHHHHhcC-CCCcEehHHHHHHHHHHHHHHHH-cCCC
Confidence            678888999999999999999999999986 99999999 88888876532 23479999766 78999999999 9997


Q ss_pred             CCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhcccccccc
Q 037522          196 PQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGE  275 (541)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~  275 (541)
                      ...      ...+.+....+...     ..|.+       +  ...++..++.+.+.+++.+.++++++.          
T Consensus       191 ~~~------~~~~~~~~~~~~~~-----~~p~~-------~--~~~~~~~~~~~~~~~~~~~~i~~r~~~----------  240 (435)
T 2wm5_A          191 KAD------HQRIFHWTNVILGF-----GDPDL-------A--TDFDEFMQVSADIGAYATALAEDRRVN----------  240 (435)
T ss_dssp             GGG------HHHHHHHHHHHHHT-----TCTTS-------C--CCHHHHHHHHHHHHHHHHHHHHHHHHS----------
T ss_pred             HHH------HHHHHHHHHHHhcc-----CCcch-------h--hhHHHHHHHHHHHHHHHHHHHHHHhcC----------
Confidence            642      12333333322211     11210       0  111344556678888888888887652          


Q ss_pred             ccCCCCchhHHHHHhhc---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCC
Q 037522          276 AATTTPHDDLLSRFMKK---KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRD  352 (541)
Q Consensus       276 ~~~~~~~~~~l~~ll~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~  352 (541)
                           ...|+++.|++.   +..++++++..++..+++||+|||+.+++|++++|+.||++|++|++|++.         
T Consensus       241 -----~~~dll~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~~---------  306 (435)
T 2wm5_A          241 -----HHDDLTSSLVEAEVDGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDG---------  306 (435)
T ss_dssp             -----CCSSHHHHHHHCCBTTBCCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHHH---------
T ss_pred             -----CCCCHHHHHHhhhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChHh---------
Confidence                 236899999864   335899999999999999999999999999999999999999999999652         


Q ss_pred             CcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCc
Q 037522          353 VSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEF  432 (541)
Q Consensus       353 ~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F  432 (541)
                                        ||+|+|+|+||++|+++...|.+. +++.++||.||||+.|.++.+++||||++| +||++|
T Consensus       307 ------------------~l~a~i~E~lRl~p~~~~~~R~~~-~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f-~dP~~F  366 (435)
T 2wm5_A          307 ------------------LAPTAVEEIVRWASPVVYMRRTLT-QDIELRGTKMAAGDKVSLWYCSANRDESKF-ADPWTF  366 (435)
T ss_dssp             ------------------HHHHHHHHHHHHHCSBCCEEEEES-SCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTCC
T ss_pred             ------------------HHHHHHHHHHhhcCcccCcceEeC-CCeeECCEEECCCCEEEeCHHHhcCCcccC-cCCCcc
Confidence                              689999999999999995444454 555569999999999999999999999999 999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCC-CCcccchHHHHHHHHHHHHHHHHhhce-EEEeCCcccceeeeeEEecCCceeE
Q 037522          433 KPERWLSQDGNKYEGHDQYKFVAFNA-GPRICLGKDLAYLQMKSIAAEVLLRYH-LTVVPGHRVEQKMSLTLFMKYGLMM  510 (541)
Q Consensus       433 ~p~Rf~~~~~~~~~~~~~~~~~~Fg~-G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~v  510 (541)
                      ||||+  +          ..++|||+ |+|.|+|++||+.|++++++.||++|+ +++.++.  .+..+........++|
T Consensus       367 ~PeR~--~----------~~~lpFG~~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~~~~~~~~~~~~lpv  432 (435)
T 2wm5_A          367 DLARN--P----------NPHLGFGGGGAHFCLGANLARREIRVAFDELRRQMPDVVATEEP--ARLLSQFIHGIKTLPV  432 (435)
T ss_dssp             CTTCC--S----------CCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEECSCC--EECCCSSBCCEEECEE
T ss_pred             CCCCC--C----------CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCccEECCCc--cccccccccCccceeE
Confidence            99993  1          24899999 999999999999999999999999997 9987532  2233333344455666


Q ss_pred             EE
Q 037522          511 NV  512 (541)
Q Consensus       511 ~~  512 (541)
                      ++
T Consensus       433 ~~  434 (435)
T 2wm5_A          433 TW  434 (435)
T ss_dssp             EC
T ss_pred             Ee
Confidence            54


No 56 
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00  E-value=4.6e-55  Score=432.53  Aligned_cols=367  Identities=17%  Similarity=0.260  Sum_probs=284.9

Q ss_pred             hhHHHHHHHHHHcCCcccccceeeecc-CCcceEEEecCChhhHHHHHhccCCCCCCChhH-HH--HHHh-hccCcceec
Q 037522           48 RLHDWISDNLRACGGTYQTCIFAIPVL-GRKQGLVTVTCDPKNVEHILKARFDNYPKGPTW-QA--AFHD-LLGDGIFNS  122 (541)
Q Consensus        48 ~~~~~~~~~~~kyG~v~~~~~~~~~~~-~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~-~~--~~~~-~~g~~l~~~  122 (541)
                      +++.++.++ ++||++|+   +   ++ ++.+.++|  +||+.+++++.++  .|.+++.. ..  .+.. ..+.+++..
T Consensus        38 ~p~~~~~~l-~~yGpv~~---~---~~~g~~~~vvv--~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~~  106 (417)
T 2y5n_A           38 TLAGRYGEL-QETEPVSR---V---RPPYGEEAWLV--TRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGLLSM  106 (417)
T ss_dssp             CCCHHHHHH-HHHCSEEE---E---ECSBSCCEEEE--CSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSGGGC
T ss_pred             CchHHHHHH-HhcCCeEe---e---ccCCCceEEEE--CCHHHHHHHHcCC--CcccCccccccccccCcccccccCccC
Confidence            577888888 89999876   3   44 67889999  9999999999874  47666432 10  0111 135678888


Q ss_pred             CChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHH-HHHHHHHHHhhhccCCCCccCC
Q 037522          123 DGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLL-LRMTFDNICGLAFGKDPQTLSQ  201 (541)
Q Consensus       123 ~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~  201 (541)
                      +|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+   ++.++|+...+ ..+++++++. +||.+...   
T Consensus       107 dg~~h~~~R~~l~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~---~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~---  177 (417)
T 2y5n_A          107 DPPEHSRLRRLVVKAFTARRAESL-RPRAREIA-HELVDQMAA---TGQPADLVAMFARQLPVRVICE-LLGVPSAD---  177 (417)
T ss_dssp             CTTHHHHHHHHHHHHSCHHHHHHT-HHHHHHHH-HHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG---
T ss_pred             CchHHHHHHHHHhhhcCHHHHHHH-HHHHHHHH-HHHHHHHHh---CCCCeeHHHHHHHHhHHHHHHH-HcCCCHHH---
Confidence            999999999999999999999986 89999999 888887763   22279999776 4699999998 68986531   


Q ss_pred             CCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccccccccCCCC
Q 037522          202 GLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTP  281 (541)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~  281 (541)
                         ...+.+....+..    ....|              .++..++.+.+.+++.+.++++++.               .
T Consensus       178 ---~~~~~~~~~~~~~----~~~~~--------------~~~~~~~~~~l~~~~~~~i~~r~~~---------------~  221 (417)
T 2y5n_A          178 ---HDRFTRWSGAFLS----TAEVT--------------AEEMQEAAEQAYAYMGDLIDRRRKE---------------P  221 (417)
T ss_dssp             ---HHHHHHHHHTTST----TCCCC--------------HHHHHHHHHHHHHHHHHHHHHHHHS---------------C
T ss_pred             ---HHHHHHHHHHHhc----ccCCC--------------HHHHHHHHHHHHHHHHHHHHHHHhC---------------C
Confidence               1222222211110    00000              1233456677888888888877642               2


Q ss_pred             chhHHHHHhhc---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCccccc
Q 037522          282 HDDLLSRFMKK---KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVE  358 (541)
Q Consensus       282 ~~~~l~~ll~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~  358 (541)
                      ..|+++.|++.   +..++++++.+++..+++||+|||+.+++|++++|++||++|++|++|++                
T Consensus       222 ~~dll~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~----------------  285 (417)
T 2y5n_A          222 TDDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPE----------------  285 (417)
T ss_dssp             CSSHHHHHHHCCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG----------------
T ss_pred             CCCHHHHHHhhhccCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH----------------
Confidence            35899999864   33599999999999999999999999999999999999999999998731                


Q ss_pred             CCCCHHhhhcchhHHHHHhhhhcCCCCCC-CCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccCCCC
Q 037522          359 EPLVFEEVDRLIYLKAALSETLRLYPSVP-QDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERW  437 (541)
Q Consensus       359 ~~~~~~~l~~lp~l~a~i~EtlRl~p~~~-~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf  437 (541)
                                  ||+|||+|+||++|+++ ...+|.+.+++.++||.||||+.|.++.+++||||++| +||++|+||||
T Consensus       286 ------------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~  352 (417)
T 2y5n_A          286 ------------LIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQF-PDADRIDVDRT  352 (417)
T ss_dssp             ------------GHHHHHHHHHHHCCCBSSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-TTTTSCCTTCS
T ss_pred             ------------HHHHHHHHHHHhcCCccccccceEeCCCEEECCEEECCCCEEEeChhhhCCCcccC-CCccccCCCCC
Confidence                        68999999999999999 34444445555569999999999999999999999999 99999999998


Q ss_pred             CCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCC-cccceeeeeEEecCCceeEE
Q 037522          438 LSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPG-HRVEQKMSLTLFMKYGLMMN  511 (541)
Q Consensus       438 ~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~  511 (541)
                      .            ..++|||+|+|.|+|++||+.|++++++.|+++| ++++.++ .++.+..+...+....++|+
T Consensus       353 ~------------~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~  416 (417)
T 2y5n_A          353 P------------NQHLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPETQLRWSEGMLLRGPLELPVV  416 (417)
T ss_dssp             S------------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCCSSBCCBSCCEEE
T ss_pred             C------------CCcCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCCccceeccCcccCCcceeEEe
Confidence            3            2489999999999999999999999999999999 5998764 34444445555556667665


No 57 
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00  E-value=1.2e-55  Score=440.10  Aligned_cols=381  Identities=15%  Similarity=0.149  Sum_probs=277.6

Q ss_pred             hhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChhHHHHHHhhccC-cceecCChh
Q 037522           48 RLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAFHDLLGD-GIFNSDGDT  126 (541)
Q Consensus        48 ~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~~~~~~~~~g~-~l~~~~g~~  126 (541)
                      +++.++.++ ++||++|+   +   ..++  .++|  ++|+.+++|+.++ ..|.+++.... ....++. +++..+|+.
T Consensus        54 ~p~~~~~~l-r~~gpv~~---~---~~~~--~~vv--~~~~~v~~vl~~~-~~f~~~~~~~~-~~~~~~~~~l~~~dg~~  120 (441)
T 3nc3_A           54 NPYAYFSQL-REEDPVHY---E---ESID--SYFI--SRYHDVRYILQHP-DIFTTKSLVER-AEPVMRGPVLAQMHGKE  120 (441)
T ss_dssp             CGGGTHHHH-HHHCSEEE---E---TTTT--EEEE--CCHHHHHHHHHCT-TTEECCCTTSC-CCCSCC-----------
T ss_pred             ChHHHHHHH-HhcCCEEE---e---CCCC--EEEE--cCHHHHHHHhcCc-ccccccccccc-cccccCCCccccCCcHH
Confidence            466666665 68999866   2   2333  7888  9999999999987 45777653321 1223443 578889999


Q ss_pred             HHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHH-HHHHHHHHHHHHhhhccCCCCccCCCCCc
Q 037522          127 WLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQ-DLLLRMTFDNICGLAFGKDPQTLSQGLPE  205 (541)
Q Consensus       127 w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~-~~~~~~~~~~~~~~~fG~~~~~~~~~~~~  205 (541)
                      |+++|+++.+.|+++.++.+ .+.+.+.+ +.+++.+.+    ++.+|+. ++...+++++++. +||.+...      .
T Consensus       121 h~~~Rr~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~----~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~------~  187 (441)
T 3nc3_A          121 HSAKRRIVVRSFIGDALDHL-SPLIKQNA-ENLLAPYLE----RGKSDLVNDFGKTFAVCVTMD-MLGLDKRD------H  187 (441)
T ss_dssp             --CCHHHHHHHHHHTHHHHH-HHHHHHHH-HHHHTTTTT----TTEEECCCCCHHHHHHHHHHH-HTTCCGGG------H
T ss_pred             HHHHHHHHHhhcCHHHHHHH-HHHHHHHH-HHHHHHHHh----cCCCcHHHHHHHHHHHHHHHH-HcCCCHHH------H
Confidence            99999999999999999996 99999998 777776642    4568875 4555699999998 58976532      2


Q ss_pred             chHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccccccccCCCCchhH
Q 037522          206 NSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDL  285 (541)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~  285 (541)
                      ..+......+........ .+...           .....++.+.+.+++.++++++++.               ..+|+
T Consensus       188 ~~~~~~~~~~~~~~~~~~-~~~~~-----------~~~~~~~~~~l~~~~~~~i~~rr~~---------------~~~Dl  240 (441)
T 3nc3_A          188 EKISEWHSGVADFITSIS-QSPEA-----------RAHSLWCSEQLSQYLMPVIKERRVN---------------PGSDL  240 (441)
T ss_dssp             HHHHHHHHHHHHHHHCSC-CCHHH-----------HHHHHHHHHHHHHHHHHHHHHHTTS---------------CCSSH
T ss_pred             HHHHHHHHHHHHhccccc-CChHH-----------HHHHHHHHHHHHHHHHHHHHHHHhC---------------CCCCH
Confidence            334444443333221111 11110           1223445677888888888877532               34689


Q ss_pred             HHHHhhc---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCcccccCCCC
Q 037522          286 LSRFMKK---KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLV  362 (541)
Q Consensus       286 l~~ll~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~  362 (541)
                      ++.|++.   ++.++++++.+++..+++||+|||+.+++|++++|+.||++|++|++|+                     
T Consensus       241 l~~Ll~~~~~~~~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~---------------------  299 (441)
T 3nc3_A          241 ISILCTSEYEGMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADR---------------------  299 (441)
T ss_dssp             HHHHCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCG---------------------
T ss_pred             HHHHHHhhccCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH---------------------
Confidence            9999863   3459999999999999999999999999999999999999999999863                     


Q ss_pred             HHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccCCCCCCCCC
Q 037522          363 FEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDG  442 (541)
Q Consensus       363 ~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~  442 (541)
                             +||+++|+|+||++|+++...|.+ .+++.++||.||||+.|.++.+++||||++| +||++|||+||+....
T Consensus       300 -------~~l~a~i~E~LRl~pp~~~~~R~~-~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f-~dP~~F~PeR~~~~~~  370 (441)
T 3nc3_A          300 -------SLVPRAIAETLRYKPPVQLIPRQL-SQDTVVGGMEIKKDTIVFCMIGAANRDPEAF-EQPDVFNIHREDLGIK  370 (441)
T ss_dssp             -------GGHHHHHHHHHHHSCSBCEEEEEE-SSCEESSSCEECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTCTTSCGG
T ss_pred             -------HHHHHHHHHhhhcCCcccCccEEE-CCCEEECCEEECCCCEEEechHHhcCChhhC-CCcccCCCCCCCcccc
Confidence                   489999999999999998855445 4555569999999999999999999999999 9999999999976432


Q ss_pred             CCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCCcccceeeeeEEecCCceeEEEee
Q 037522          443 NKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPGHRVEQKMSLTLFMKYGLMMNVHP  514 (541)
Q Consensus       443 ~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  514 (541)
                      ..  ...+..++|||+|+|.|+|++||+.|++++++.|+++| ++++.++. ..+..+...+....++|+++|
T Consensus       371 ~~--~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-~~~~~~~~~~~~~~lpv~~~~  440 (441)
T 3nc3_A          371 SA--FSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIVLDKMRNIRLEEDF-CYAESGLYTRGPVSLLVAFDG  440 (441)
T ss_dssp             GT--TSSSCSSCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSTTCEECTTC-CCCEECSSBCEESCCEEECC-
T ss_pred             cc--cCCCCCcccCCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEECCCC-cccccCccccCcceeEEEEec
Confidence            11  11256799999999999999999999999999999999 99997653 334444455556788888764


No 58 
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00  E-value=1.6e-54  Score=430.33  Aligned_cols=375  Identities=15%  Similarity=0.167  Sum_probs=286.7

Q ss_pred             hhhHHHHHHHHHHcC-CcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChhHH-HHHHhhccCcceecCC
Q 037522           47 KRLHDWISDNLRACG-GTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTWQ-AAFHDLLGDGIFNSDG  124 (541)
Q Consensus        47 ~~~~~~~~~~~~kyG-~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~~-~~~~~~~g~~l~~~~g  124 (541)
                      .+++.++.++++++| ++|+   +   ..++ +.++|  +||+.+++++++. ..|++++... .......+.+++..+|
T Consensus        38 ~dp~~~~~~lr~~~G~pv~~---~---~~~~-~~~vv--~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~dg  107 (421)
T 3lxh_A           38 QGFHEAWKRVQQPDTPPLVW---T---PFTG-GHWIA--TRGTLIDEIYRSP-ERFSSRVIWVPREAGEAYDMVPTKLDP  107 (421)
T ss_dssp             GCHHHHHHHHCCTTCCSEEE---E---SSTT-SEEEE--CSHHHHHHHHTCT-TTEETTCCSSSHHHHHHCCCTTTTCCT
T ss_pred             cChhHHHHHHHhcCCCCeEe---c---cCCC-CeEEE--cCHHHHHHHHcCh-hhccCCcccCCcccccccccCCccCCc
Confidence            368888888877655 7765   2   3333 57888  9999999999765 6787765321 1222233467788999


Q ss_pred             hhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHH-HHHHHHHHHhhhccCCCCccCCCC
Q 037522          125 DTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLL-LRMTFDNICGLAFGKDPQTLSQGL  203 (541)
Q Consensus       125 ~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~  203 (541)
                      +.|+++|+++++.|+++.++.+ .+.+.+.+ +.+++.+.+    ++.+|+...+ ..++.++++. +||.+...     
T Consensus       108 ~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~----~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~-----  175 (421)
T 3lxh_A          108 PEHTPYRKAIDKGLNLAEIRKL-EDQIRTIA-VEIIEGFAD----RGHCEFGSEFSTVFPVRVFLA-LAGLPVED-----  175 (421)
T ss_dssp             TTHHHHHHHHHHHHSHHHHHTT-HHHHHHHH-HHHHHTTTT----TSEEEHHHHTTTTHHHHHHHH-HHTCCGGG-----
T ss_pred             HHHHHHHHHHhhhcCHHHHHHH-HHHHHHHH-HHHHHHHhh----cCCeehHHHHHHHHHHHHHHH-HcCCCHHH-----
Confidence            9999999999999999999986 89999888 777776642    3478976665 5577777776 58876432     


Q ss_pred             CcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccccccccCCCCch
Q 037522          204 PENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHD  283 (541)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~  283 (541)
                       ...+.+....+..   .....|.           ...++..++.+.+.+++.++++++++.               ...
T Consensus       176 -~~~~~~~~~~~~~---~~~~~p~-----------~~~~~~~~~~~~~~~~~~~~i~~r~~~---------------~~~  225 (421)
T 3lxh_A          176 -ATKLGLLANEMTR---PSGNTPE-----------EQGRSLEAANKGFFEYVAPIIAARRGG---------------SGT  225 (421)
T ss_dssp             -HHHHHHHHHHHHS---CCCSSHH-----------HHHHHHHHHHHHHHHHHHHHHHHHTTC---------------CCC
T ss_pred             -HHHHHHHHHHHhc---cccCCCc-----------hhHHHHHHHHHHHHHHHHHHHHHHHhC---------------CCC
Confidence             1233333222211   1111121           112344556778888888888877543               346


Q ss_pred             hHHHHHhhc---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCcccccCC
Q 037522          284 DLLSRFMKK---KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEP  360 (541)
Q Consensus       284 ~~l~~ll~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~  360 (541)
                      |+++.|++.   +..++++++.++++.+++||+|||+.+++|++++|++||++|++|++|++                  
T Consensus       226 dll~~ll~~~~~~~~l~~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------  287 (421)
T 3lxh_A          226 DLITRILNVEIDGKPMPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPL------------------  287 (421)
T ss_dssp             SHHHHHHTSCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHH------------------
T ss_pred             CHHHHHHhhhccCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------
Confidence            899999963   34599999999999999999999999999999999999999999999865                  


Q ss_pred             CCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccCCCCCCC
Q 037522          361 LVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQ  440 (541)
Q Consensus       361 ~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~  440 (541)
                                |++++|+|+||++|++ ...|.+. +++.++||.||||+.|.++.+++||||++| +||++||||||   
T Consensus       288 ----------~l~a~i~E~lRl~p~~-~~~R~~~-~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~-~dP~~F~PeR~---  351 (421)
T 3lxh_A          288 ----------KLQRGVEELFRRFAVV-SDARYVV-SDMEFHGTMLKEGDLILLPTALHGLDDRHH-DDPMTVDLSRR---  351 (421)
T ss_dssp             ----------HHHHHHHHHHHHCCCB-EEEEEEC-SCEEETTEEECTTCEEEEETHHHHTCTTTS-SSTTSCCTTCS---
T ss_pred             ----------HHHHHHHHHHHhcCcc-CCceeeC-CCeeECCEEECCCCEEEEchhhhCCChhhC-CCcCeeCCCCC---
Confidence                      6799999999999999 5555555 455559999999999999999999999999 99999999994   


Q ss_pred             CCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCCcccceeeeeEEecCCceeEEEeeCCC
Q 037522          441 DGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPGHRVEQKMSLTLFMKYGLMMNVHPREL  517 (541)
Q Consensus       441 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  517 (541)
                               +..++|||+|+|.|+|++||+.|++++++.|+++| +|++.++............ ...++|+++||..
T Consensus       352 ---------~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~~~~~~~~~~~~~-~~~lpv~~~p~~~  419 (421)
T 3lxh_A          352 ---------DVTHSTFAQGPHRCAGMHLARLEVTVMLQEWLARIPEFRLKDRAVPIYHSGIVAA-VENIPLEWEPQRV  419 (421)
T ss_dssp             ---------CCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCCCCEECTTCCCEEECSSBCE-EECCEEECCCC--
T ss_pred             ---------CCCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCCCcEECCCCCceeccccccC-ceeeeEEEecccc
Confidence                     23589999999999999999999999999999999 9999877655554444333 4569999998853


No 59 
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00  E-value=3e-54  Score=425.60  Aligned_cols=365  Identities=16%  Similarity=0.150  Sum_probs=282.9

Q ss_pred             hhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChhHH-HHHHhhccCcceecCCh
Q 037522           47 KRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTWQ-AAFHDLLGDGIFNSDGD  125 (541)
Q Consensus        47 ~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~~-~~~~~~~g~~l~~~~g~  125 (541)
                      .+++.++.+++++ |++|+   +   ..+ .+.++|  +||+.++++++++ ..|++++... .......+.+++..+|+
T Consensus        24 ~~p~~~~~~l~~~-Gpv~~---~---~~~-~~~~vv--~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~g~   92 (396)
T 3oft_A           24 QDYFAAWKTLLDG-PGLVW---S---TAN-GGHWIA--ARGDVVRELWGDA-ERLSSQCLAVTPGLGKVMQFIPLQQDGA   92 (396)
T ss_dssp             TCHHHHHHGGGGS-CSEEE---E---CST-TSEEEE--CSHHHHHHHHHCT-TTEESTTCCSSTTHHHHHCCTTTTCCHH
T ss_pred             cChHHHHHHHHhc-CCeee---e---cCC-CCEEEE--cCHHHHHHHHcCc-ccccCCcccCCCccccccccCccccCCc
Confidence            3688999999988 99866   2   344 357888  9999999999876 6777765221 11112234567888999


Q ss_pred             hHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHH-HHHHHHHHHhhhccCCCCccCCCCC
Q 037522          126 TWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLL-LRMTFDNICGLAFGKDPQTLSQGLP  204 (541)
Q Consensus       126 ~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~  204 (541)
                      .|+++|+++++.|+++.++.+ .+.+.+.+ +.+++.+.+    +..+|+...+ ..++.++++. +||.+...      
T Consensus        93 ~h~~~R~~~~~~f~~~~l~~~-~~~i~~~~-~~l~~~l~~----~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~------  159 (396)
T 3oft_A           93 EHKAFRTPVMKGLASRFVVAL-EPKVQAVA-RKLMESLRP----RGSCDFVSDFAEILPLNIFLT-LIDVPLED------  159 (396)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHH-HHHHHHHH-HHHHHHHGG----GSEEEHHHHTTTTHHHHHHHH-HTTCCGGG------
T ss_pred             HHHHHHHHhhhhhCHHHHHHH-HHHHHHHH-HHHHHHhhh----cCCccHHHHHHHHHHHHHHHH-HcCCCHHH------
Confidence            999999999999999999986 89999999 888777753    2468887666 5566666665 67875321      


Q ss_pred             cchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccccccccCCCCchh
Q 037522          205 ENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDD  284 (541)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~  284 (541)
                      ...+......+                    +.....++..++.+.+.+++.+.++++++.               ...|
T Consensus       160 ~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~---------------~~~d  204 (396)
T 3oft_A          160 RPRLRQLGVQL--------------------TRPDGSMTVEQLKQAADDYLWPFIEKRMAQ---------------PGDD  204 (396)
T ss_dssp             HHHHHHHHHHH--------------------HSCCSSCCHHHHHHHHHHHHHHHHHHHHHS---------------CCSS
T ss_pred             HHHHHHHHHHH--------------------hCCCCHHHHHHHHHHHHHHHHHHHHHHHhC---------------CCCC
Confidence            11222111111                    111123455667788888999999887754               3468


Q ss_pred             HHHHHhhc---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCcccccCCC
Q 037522          285 LLSRFMKK---KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPL  361 (541)
Q Consensus       285 ~l~~ll~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~  361 (541)
                      +++.|++.   +..++++++.+++..+++||+|||+.+++|++++|+.||++|++|++|++                   
T Consensus       205 ~l~~ll~~~~~~~~l~~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~-------------------  265 (396)
T 3oft_A          205 LFSRILSEPVGGRPWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPD-------------------  265 (396)
T ss_dssp             HHHHHHTSCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-------------------
T ss_pred             HHHHHHHhhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-------------------
Confidence            99999963   34599999999999999999999999999999999999999999999843                   


Q ss_pred             CHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccCCCCCCCC
Q 037522          362 VFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQD  441 (541)
Q Consensus       362 ~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~  441 (541)
                               |++|+|+|+||++|++ ...|.+.+ ++.++||.||||+.|.++.+++||||++| +||++|+|+||++  
T Consensus       266 ---------~l~a~i~E~lRl~p~~-~~~R~~~~-d~~~~g~~Ip~G~~V~~~~~~~~rdp~~~-~dp~~F~PeR~~~--  331 (396)
T 3oft_A          266 ---------LIPAAADELMRRYPTV-AVSRNAVA-DVDADGVTIRKGDLVYLPSVLHNLDPASF-EAPEEVRFDRGLA--  331 (396)
T ss_dssp             ---------GHHHHHHHHHHHCCCB-EEEEEESS-CEEETTEEECTTCEEEEETHHHHTCTTTS-SSTTSCCSCCCCC--
T ss_pred             ---------hHHHHHHHHHHhcCcc-cCceecCC-CEEECCEEECCCCEEEeChHHhCCCcccC-CCcCccCCCCCCC--
Confidence                     6899999999999999 55555554 55559999999999999999999999999 9999999999973  


Q ss_pred             CCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCCcccceeeeeEEecCCceeEEE
Q 037522          442 GNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPGHRVEQKMSLTLFMKYGLMMNV  512 (541)
Q Consensus       442 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~  512 (541)
                              +..++|||+|+|.|+|++||+.|++++++.|+++| ++++.++............ ...++|++
T Consensus       332 --------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~~~~~~~~~~~~~-~~~lpv~~  394 (396)
T 3oft_A          332 --------PIRHTTMGVGAHRCVGAGLARMEVIVFLREWLGGMPEFALAPDKAVTMKGGNVGA-CTALPLVW  394 (396)
T ss_dssp             --------GGGSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSCCEEECSSSCCEEECSSBCE-EEECEEEE
T ss_pred             --------CCCcccCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceECCCCCceeccccccC-cccceEEe
Confidence                    34699999999999999999999999999999999 9999876655444333222 23466655


No 60 
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00  E-value=2.3e-54  Score=428.75  Aligned_cols=346  Identities=19%  Similarity=0.202  Sum_probs=277.0

Q ss_pred             hhHHHHHHHHHHcCCcccccceeeeccC-CcceEEEecCChhhHHHHHhccCCCCCCChh---HHHHHHh-----hccCc
Q 037522           48 RLHDWISDNLRACGGTYQTCIFAIPVLG-RKQGLVTVTCDPKNVEHILKARFDNYPKGPT---WQAAFHD-----LLGDG  118 (541)
Q Consensus        48 ~~~~~~~~~~~kyG~v~~~~~~~~~~~~-~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~---~~~~~~~-----~~g~~  118 (541)
                      +++.++.+++++ |++|+   +   .++ +.+.++|  ++|+.+++++.++  .|++++.   +......     ..+.+
T Consensus        30 dp~~~~~~l~~~-Gpv~~---~---~~~~g~~~~vv--~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~   98 (417)
T 3tyw_A           30 AAPAEYAALRTD-DPVAR---V---TLPTRREAWVV--TRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRP   98 (417)
T ss_dssp             SCCTHHHHHHHT-CTEEE---E---ECTTSCEEEEE--CCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCC
T ss_pred             CchHHHHHHHhh-CCeee---e---ecCCCCCeEEE--cCHHHHHHHHcCC--CcccCCccccccccccccccccccccc
Confidence            577788888887 99876   2   343 5788999  9999999999875  5655321   1111111     23567


Q ss_pred             ceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHH-HHHHHHHHHhhhccCCCC
Q 037522          119 IFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLL-LRMTFDNICGLAFGKDPQ  197 (541)
Q Consensus       119 l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~  197 (541)
                      ++..+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+   .++++|+...+ ..+++++++.+ ||.+..
T Consensus        99 l~~~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~  172 (417)
T 3tyw_A           99 FIRTDAPEHTRYRRMLLPAFTVRRVRAM-RPAVQARV-DEILDGMLA---AGGPVDLVSAYANAVSTSVICEL-LGIPRH  172 (417)
T ss_dssp             GGGCCHHHHHHHHHHHGGGGCHHHHHHT-HHHHHHHH-HHHHHHHHH---HCSSEEHHHHTHHHHHHHHHHHH-HTCCTT
T ss_pred             hhhcCCcHHHHHHHHHHhhhCHHHHHHH-HHHHHHHH-HHHHHHHHh---hCCCcchHHHHHHHHHHHHHHHH-hCCCHH
Confidence            8889999999999999999999999886 89999999 888887764   35679999987 58899999997 898765


Q ss_pred             ccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhcccccccccc
Q 037522          198 TLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAA  277 (541)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~  277 (541)
                      .      ...+......+..       ..            ...++..++.+.+.+++.+.++++++.            
T Consensus       173 ~------~~~~~~~~~~~~~-------~~------------~~~~~~~~~~~~l~~~~~~~i~~r~~~------------  215 (417)
T 3tyw_A          173 D------LEFFRDVTRISGS-------RN------------STAEQVSEALGGLFGLLGGLVAERREE------------  215 (417)
T ss_dssp             T------TTHHHHHHHHHHS-------SS------------SCTTHHHHHHHHHHHHHHHHHHHHHSS------------
T ss_pred             H------HHHHHHHHHHHhc-------cc------------CCHHHHHHHHHHHHHHHHHHHHHHhhC------------
Confidence            2      2333333222110       00            112344556677888888888877542            


Q ss_pred             CCCCchhHHHHHhhc---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCc
Q 037522          278 TTTPHDDLLSRFMKK---KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVS  354 (541)
Q Consensus       278 ~~~~~~~~l~~ll~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~  354 (541)
                         ...|+++.+++.   +..++++++..++..+++||+|||+.+++|++++|++||++|++|++|++            
T Consensus       216 ---~~~d~l~~ll~~~~~~~~ls~~el~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------  280 (417)
T 3tyw_A          216 ---PRDDLISKLVTDHLVPGNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPD------------  280 (417)
T ss_dssp             ---CCSSHHHHHHHHTTTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCGG------------
T ss_pred             ---CCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH------------
Confidence               346899998863   23599999999999999999999999999999999999999999998832            


Q ss_pred             ccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccC
Q 037522          355 KWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKP  434 (541)
Q Consensus       355 ~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p  434 (541)
                                      ||+|+|+|+||++|+++...+|.+.+++.++||.||||+.|+++.+++||||++| +||++|+|
T Consensus       281 ----------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~P  343 (417)
T 3tyw_A          281 ----------------LMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQF-DDPERVDF  343 (417)
T ss_dssp             ----------------GHHHHHHHHHHHHCSCTTCCEEEESSCEECSSCEECTTCEEEECHHHHTTCTTTS-SSTTSCCT
T ss_pred             ----------------HHHHHHHHHHHhccccccCceeEeCCCeEECCEEECCCCEEEEehhhhcCChhhc-CCccccCC
Confidence                            6899999999999999986555555666669999999999999999999999999 99999999


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCC
Q 037522          435 ERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPG  491 (541)
Q Consensus       435 ~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~  491 (541)
                      +||.            ..++|||+|+|.|+|++||+.|++++++.|+++| +|++..+
T Consensus       344 eR~~------------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~  389 (417)
T 3tyw_A          344 HRTD------------NHHVAFGYGVHQCVGQHLARLELEVALETLLRRVPTLRLAGE  389 (417)
T ss_dssp             TCSC------------CCCCTTCCSTTCCSCHHHHHHHHHHHHHHHHHHCTTCEECSC
T ss_pred             CCCC------------CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcccccCC
Confidence            9993            2489999999999999999999999999999999 9998743


No 61 
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00  E-value=8.2e-55  Score=430.48  Aligned_cols=368  Identities=18%  Similarity=0.213  Sum_probs=282.6

Q ss_pred             hhHHHHHHHHHHcCCcccccceeeecc-CCcceEEEecCChhhHHHHHhccCCCCCCChhHHHH-----HHhh-----cc
Q 037522           48 RLHDWISDNLRACGGTYQTCIFAIPVL-GRKQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAA-----FHDL-----LG  116 (541)
Q Consensus        48 ~~~~~~~~~~~kyG~v~~~~~~~~~~~-~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~~~~-----~~~~-----~g  116 (541)
                      +++.++.++. +||++|+   +   ++ |+.+.+++  +||+.+++++.++  .|++++.....     ....     .+
T Consensus        23 ~p~~~~~~l~-~~Gpv~~---~---~~~g~~~~vvv--~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~   91 (413)
T 2z36_A           23 APPAAYERLR-ERAPINK---V---RLTSGGQAWWV--SGHEEARAVLADG--RFSSDKRKDGFPLFTLDAATLQQLRSQ   91 (413)
T ss_dssp             BCCHHHHHHH-HHCSEEE---E---EETTSCEEEEE--CSHHHHHHHHHCT--TEECCTTSTTCCCSSCCHHHHHHHTTS
T ss_pred             CchHHHHHHH-HcCCeeE---e---ecCCCceEEEE--ecHHHHHHHHcCC--CcccCccccCccccccccccccccccc
Confidence            4677777776 7899876   3   44 77889999  9999999999874  46665421100     1122     26


Q ss_pred             Cc-ceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHH-HHHHHHHHhhhccC
Q 037522          117 DG-IFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLL-RMTFDNICGLAFGK  194 (541)
Q Consensus       117 ~~-l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fG~  194 (541)
                      .+ ++..+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+  ..++++|+...+. .+++++++.+ ||.
T Consensus        92 ~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~--~~~~~~d~~~~~~~~~~~~vi~~~-~G~  166 (413)
T 2z36_A           92 PPLMLGMDGAEHSAARRPVIGEFTVKRLAAL-RPRIQDIV-DHFIDDMLA--TDQRPVDLVQALSLPVPSLVICEL-LGV  166 (413)
T ss_dssp             CCCGGGCCHHHHHHHHHHHHGGGSHHHHHHH-HHHHHHHH-HHHHHHHTT--CSCSSEEHHHHTTTHHHHHHHHHH-HTC
T ss_pred             cccccccCchHHHHHHHHHHHhhCHHHHHHH-HHHHHHHH-HHHHHHHHH--hcCCCccHHHHHhhhhHHHHHHHH-hCC
Confidence            77 8888999999999999999999999986 99999999 888777753  1256899986664 6999999995 898


Q ss_pred             CCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccccc
Q 037522          195 DPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQG  274 (541)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~  274 (541)
                      +...      ...+......+       .....             .++..++.+.+.+++.++++++++.         
T Consensus       167 ~~~~------~~~~~~~~~~~-------~~~~~-------------~~~~~~~~~~~~~~~~~~i~~r~~~---------  211 (413)
T 2z36_A          167 PYTD------HDFFQSRTTMM-------VSRTS-------------MEDRRRAFAELRAYIDDLITRKESE---------  211 (413)
T ss_dssp             CGGG------HHHHHHHHHHT-------TCSSC-------------HHHHHHHHHHHHHHHHHHHHHHHSS---------
T ss_pred             CHHH------HHHHHHHHHHH-------hcccC-------------cHHHHHHHHHHHHHHHHHHHHHHhC---------
Confidence            6531      12222221110       00000             0233445677788888888776532         


Q ss_pred             cccCCCCchhHHHHHhhc---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCC
Q 037522          275 EAATTTPHDDLLSRFMKK---KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGR  351 (541)
Q Consensus       275 ~~~~~~~~~~~l~~ll~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~  351 (541)
                            ...|+++.|++.   +..++++++.+++..+++||+|||+.+++|++++|+.||++|++|++|++         
T Consensus       212 ------~~~dll~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~---------  276 (413)
T 2z36_A          212 ------PGDDLFSRQIARQRQEGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANPG---------  276 (413)
T ss_dssp             ------CCSSHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG---------
T ss_pred             ------CCCCHHHHHHHhhcCCCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhChH---------
Confidence                  235788888853   34599999999999999999999999999999999999999999998731         


Q ss_pred             CCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCC
Q 037522          352 DVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLE  431 (541)
Q Consensus       352 ~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~  431 (541)
                                         ||+|||+|+||++|+++...+|.+.+++.++||.||||+.|.++.+++||||++| +||++
T Consensus       277 -------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~  336 (413)
T 2z36_A          277 -------------------RTPMAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVF-KDPAV  336 (413)
T ss_dssp             -------------------GHHHHHHHHHHHHCTTTTCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTS
T ss_pred             -------------------HHHHHHHHHHHhCCCcccceeeeeCCCEEECCEEECCCCEEEEChHhhcCChhhC-CCccc
Confidence                               6899999999999999955555555556669999999999999999999999999 99999


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCC-cccceeeeeEEecCCcee
Q 037522          432 FKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPG-HRVEQKMSLTLFMKYGLM  509 (541)
Q Consensus       432 F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~  509 (541)
                      |+||||.            ..++|||+|+|.|+|++||++|++++++.|+++| ++++.++ .++.+..+...+-...++
T Consensus       337 F~PeR~~------------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~g~~~lp  404 (413)
T 2z36_A          337 LDVERGA------------RHHLAFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRLAVPMEDVPFKGDSVIYGVHELP  404 (413)
T ss_dssp             CCTTCCC------------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCTTSSSCCBSCCE
T ss_pred             cCCCCCC------------CCCCCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCccccCCcccceecccccccCcceee
Confidence            9999983            1379999999999999999999999999999999 5898765 344444444444445666


Q ss_pred             EEEe
Q 037522          510 MNVH  513 (541)
Q Consensus       510 v~~~  513 (541)
                      |++.
T Consensus       405 v~~~  408 (413)
T 2z36_A          405 VTWH  408 (413)
T ss_dssp             EECC
T ss_pred             EEee
Confidence            6654


No 62 
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00  E-value=1.1e-54  Score=431.96  Aligned_cols=376  Identities=18%  Similarity=0.183  Sum_probs=283.1

Q ss_pred             hhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChhHHH---HH------HhhccC
Q 037522           47 KRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTWQA---AF------HDLLGD  117 (541)
Q Consensus        47 ~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~~~---~~------~~~~g~  117 (541)
                      .+++.++.++ ++||++|+   +   .+|   .++|  ++|+.++++++++ ..+.+++....   ..      ....+.
T Consensus        29 ~~p~~~~~~l-r~~gpv~~---~---~~g---~~vv--~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (418)
T 3r9b_A           29 ADPYPIYDRI-RRGGPLAL---P---EAN---LAVF--SSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPA   95 (418)
T ss_dssp             TCCHHHHHHH-HHHCCEEE---G---GGT---EEEE--CSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CC
T ss_pred             cCchHHHHHH-HhcCCEEE---C---CCC---eEEE--ecHHHHHHHHcCc-ccccCccccccccccccccccccccccc
Confidence            4678888777 68899866   2   343   7888  9999999999875 33444432211   11      112356


Q ss_pred             cceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHH-HHHHHHHHHhhhccCCC
Q 037522          118 GIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLL-LRMTFDNICGLAFGKDP  196 (541)
Q Consensus       118 ~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~  196 (541)
                      +++..+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++ +.    .+.++|+...+ ..+++++++. +||.+.
T Consensus        96 ~l~~~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~-l~----~~~~~d~~~~~~~~~~~~vi~~-~~G~~~  167 (418)
T 3r9b_A           96 SFLFLDPPDHTRLRGLVSKAFAPRVIKRL-EPEITALV-DQLLD-AV----DGPEFNLIDNLAYPLPVAVICR-LLGVPI  167 (418)
T ss_dssp             CGGGCCTTHHHHHHHHHHGGGSHHHHGGG-HHHHHHHH-HHHHH-TC----CSSEEEHHHHTTTHHHHHHHHH-HHTCCG
T ss_pred             chhhcCCchHHHHHHHhhhhhCHHHHHHH-HHHHHHHH-HHHHh-hh----ccCCeehHHHHhCcCCHHHHHH-HcCCCH
Confidence            78889999999999999999999999996 89999988 77777 53    23489986555 6899999999 899875


Q ss_pred             CccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccccccc
Q 037522          197 QTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEA  276 (541)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~  276 (541)
                      ..      ...+......+..    .. .+..   ....++....++..++.+.+.+++.+.+++++++           
T Consensus       168 ~~------~~~~~~~~~~~~~----~~-~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~-----------  222 (418)
T 3r9b_A          168 ED------EPKFSRASALLAA----AL-DPFL---ALTGETSDLFDEQMKAGMWLRDYLRALIDERRRT-----------  222 (418)
T ss_dssp             GG------HHHHHHHHHHHHH----TT-SCHH---HHHSSCCTTHHHHHHHHHHHHHHHHHHHHHTTTS-----------
T ss_pred             HH------HHHHHHHHHHHHh----hc-Cccc---cccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------
Confidence            32      1233333222211    11 1100   0111122223445566677777777777766532           


Q ss_pred             cCCCCchhHHHHHhh---cCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCC
Q 037522          277 ATTTPHDDLLSRFMK---KKESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDV  353 (541)
Q Consensus       277 ~~~~~~~~~l~~ll~---~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~  353 (541)
                          ...|+++.+++   +++.++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++           
T Consensus       223 ----~~~d~l~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~-----------  287 (418)
T 3r9b_A          223 ----PGEDLMSGLVAVEESGDQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS-----------  287 (418)
T ss_dssp             ----CCSSHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG-----------
T ss_pred             ----CCccHHHHHHHhhhccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH-----------
Confidence                34688888884   445699999999999999999999999999999999999999999998743           


Q ss_pred             cccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCcc
Q 037522          354 SKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFK  433 (541)
Q Consensus       354 ~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~  433 (541)
                                       |++|+|+|+||++|+++...|.+ .+++.++||.||||+.|.++.+++||||++| +||++||
T Consensus       288 -----------------~l~a~i~E~lRl~p~~~~~~R~~-~~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~~-~dp~~F~  348 (418)
T 3r9b_A          288 -----------------RASAVIEETMRYDPPVQLVSRYA-GDDLTIGTHTVPKGDTMLLLLAAAHRDPTIV-GAPDRFD  348 (418)
T ss_dssp             -----------------GHHHHHHHHHHHSCSBCCEEEEE-SSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCC
T ss_pred             -----------------hHHHHHHHHHHhCCccccceeEe-CCCeEECCEEECCCCEEEEChHHhcCCcccC-CCcCcCC
Confidence                             68999999999999998876555 4555559999999999999999999999999 9999999


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCCcccceeeeeEEecCCceeEEE
Q 037522          434 PERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPGHRVEQKMSLTLFMKYGLMMNV  512 (541)
Q Consensus       434 p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~  512 (541)
                      |+|.            +..++|||+|+|.|+|++||+.|++++++.|+++| ++++.++  ..+..+...++...++|++
T Consensus       349 p~R~------------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~--~~~~~~~~~~~~~~lpv~~  414 (418)
T 3r9b_A          349 PDRA------------QIRHLGFGKGAHFCLGAPLARLEATVALPALAARFPEARLSGE--PEYKRNLTLRGMSTLSIAV  414 (418)
T ss_dssp             TTCS------------CCCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSC--CEECSCSSBCCEEECEEEC
T ss_pred             CCCC------------CCCCcCCCCcCccCccHHHHHHHHHHHHHHHHHhCccceeCCC--CccccCCcccCcceeEEEe
Confidence            9992            23489999999999999999999999999999999 7998765  3444455667778899999


Q ss_pred             eeCC
Q 037522          513 HPRE  516 (541)
Q Consensus       513 ~~r~  516 (541)
                      ++|.
T Consensus       415 ~~r~  418 (418)
T 3r9b_A          415 HHHH  418 (418)
T ss_dssp             ----
T ss_pred             cCCC
Confidence            8874


No 63 
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00  E-value=3.8e-54  Score=428.72  Aligned_cols=390  Identities=15%  Similarity=0.109  Sum_probs=290.1

Q ss_pred             CCCCCCCCCcCCChhhhhccchhhHHHHHHHHHHcCCcccccceeeec-----cCCcceEEEecCChhhHHHHHhccCCC
Q 037522           26 SLSGPRVWPLLGSLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPV-----LGRKQGLVTVTCDPKNVEHILKARFDN  100 (541)
Q Consensus        26 ~~pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~-----~~~~~~vvv~~~dp~~i~~v~~~~~~~  100 (541)
                      .||+|..+++++......   .+++.++.++ ++|||+|+   +..+.     +|+.+.++|  ++++.++++++++ ..
T Consensus        19 ~p~~~~~~~~~~~~~~~~---~~p~~~~~~l-r~~gPv~~---~~~~~g~~~~lG~~~~~vv--~~~~~v~~vl~~~-~~   88 (433)
T 3ivy_A           19 SPNLPPGFDFTDPAIYAE---RLPVAEFAEL-RSAAPIWW---NGQDPGKGGGFHDGGFWAI--TKLNDVKEISRHS-DV   88 (433)
T ss_dssp             -CCCCTTCCTTCHHHHTT---CCCHHHHHHH-HHHCSEEE---EECCTTCSTTCCSSEEEEE--CSHHHHHHHHHCT-TT
T ss_pred             CCCCCCCCCCCCHHHhhc---CCccHHHHHH-HhcCCEEe---cccccccccccCCCCEEEE--ecHHHHHHHHcCh-hh
Confidence            456666676665433221   2478888888 88999876   31100     445788999  9999999999876 66


Q ss_pred             CCCChhHHHH---------HHhhccCcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCc
Q 037522          101 YPKGPTWQAA---------FHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAK  171 (541)
Q Consensus       101 ~~~~~~~~~~---------~~~~~g~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~  171 (541)
                      |++++.....         .....+.+++..+|+.|+++|+++++.|+++.++.+ .+.+.+.+ +.+++.+..    ++
T Consensus        89 fs~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~----~~  162 (433)
T 3ivy_A           89 FSSYENGVIPRFKNDIAREDIEVQRFVMLNMDAPHHTRLRKIISRGFTPRAVGRL-HDELQERA-QKIAAEAAA----AG  162 (433)
T ss_dssp             EESTTTCSCCCCCTTCCHHHHHGGGGSGGGCCTTHHHHHHHHHGGGSCHHHHHTT-HHHHHHHH-HHHHHHHHH----HC
T ss_pred             ccCCcccccccccccccccccccccCCccccChHHHHHHHHHHHHhhCHHHHHHH-HHHHHHHH-HHHHHHHhh----CC
Confidence            7665422100         112345688899999999999999999999999986 89999999 888887753    34


Q ss_pred             ceeHHHHH-HHHHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHh--hhchHHHHHHHHHhhhccccccccch
Q 037522          172 PVDFQDLL-LRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQR--FLLPQAIWKLRKYLRLGLEVSMGPSL  248 (541)
Q Consensus       172 ~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~  248 (541)
                      ++|+...+ ..+++++++.+ ||.+.         .+...    +.......  ...|.           ....+..++.
T Consensus       163 ~~d~~~~~~~~~~~~vi~~l-~G~~~---------~~~~~----~~~~~~~~~~~~~p~-----------~~~~~~~~~~  217 (433)
T 3ivy_A          163 SGDFVEQVSCELPLQAIAGL-LGVPQ---------EDRGK----LFHWSNEMTGNEDPE-----------YAHIDPKASS  217 (433)
T ss_dssp             EEEHHHHTTSHHHHHHHHHH-HTCCH---------HHHHH----HHHHHTTCSCCCCGG-----------GTTCCHHHHH
T ss_pred             CeeHHHHHHHHHHHHHHHHH-cCCCH---------HHHHH----HHHHHHHHhccCCch-----------hhhHHHHHHH
Confidence            79999888 99999999996 88642         11111    11111110  01110           0111345667


Q ss_pred             HHHHHHHHHHHHHHHHHHhccccccccccCCCCchhHHHHHhhc---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHH
Q 037522          249 KHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKK---KESYSDEFLQHVALNFILAGRDTSSVAMSWFFW  325 (541)
Q Consensus       249 ~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~  325 (541)
                      +.+.+++.+++++++++               ..+|+++.|++.   ++.++++++..++..+++||+|||+.+++|+++
T Consensus       218 ~~~~~~~~~~i~~r~~~---------------~~~dll~~ll~~~~~~~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~  282 (433)
T 3ivy_A          218 AELIGYAMKMAEEKAKN---------------PADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMM  282 (433)
T ss_dssp             HHHHHHHHHHHHHC----------------------CHHHHHSCC--CCCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcC---------------CCCcHHHHHHhhhcCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            78888888888877643               346889999863   345999999999999999999999999999999


Q ss_pred             HHhcChHHHHHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCccc
Q 037522          326 LVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFV  405 (541)
Q Consensus       326 ~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~I  405 (541)
                      +|+.||++|++|++|++                              +++|+|+||++|+++...|.+ .+++.++||.|
T Consensus       283 ~L~~~P~~~~~l~~E~~------------------------------~a~i~E~LRl~p~~~~~~R~~-~~d~~l~G~~I  331 (433)
T 3ivy_A          283 AFAEHPDQWELYKKVRP------------------------------ETAADEIVRWATPVTAFQRTA-LRDYELSGVQI  331 (433)
T ss_dssp             HHHHCHHHHHHHHHHCC------------------------------TTHHHHHHHHHCSBCEEEEEE-SSCEEETTEEE
T ss_pred             HHHHCHHHHHHHHhCcc------------------------------cchhHHHhhhCcchhceeeEE-CCCEEECCEEE
Confidence            99999999999999943                              489999999999998865555 55555599999


Q ss_pred             CCCCEEEEehhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccC-CCCcccchHHHHHHHHHHHHHHHHhhc
Q 037522          406 PAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFN-AGPRICLGKDLAYLQMKSIAAEVLLRY  484 (541)
Q Consensus       406 p~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg-~G~r~C~G~~~a~~~~~~~l~~ll~~f  484 (541)
                      |||+.|+++.+++||||++| +||++|||+||.            ..++||| +|+|.|+|++||..|++++++.|+++|
T Consensus       332 p~G~~V~~~~~~~~rdp~~f-~dp~~F~p~R~~------------~~~l~FGg~G~r~C~G~~lA~~e~~~~l~~ll~~f  398 (433)
T 3ivy_A          332 KKGQRVVMFYRSANFDEEVF-QDPFTFNILRNP------------NPHVGFGGTGAHYCIGANLARMTINLIFNAVADHM  398 (433)
T ss_dssp             CTTCEEEEEHHHHTTCTTTS-SSTTSCCTTCCS------------CCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEChhhhcCCchhC-CCcCccCCCCCC------------CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999999999 999999999983            2489999 999999999999999999999999999


Q ss_pred             e-EEEeCCcccceeeeeEEecCCceeEEEeeCCC
Q 037522          485 H-LTVVPGHRVEQKMSLTLFMKYGLMMNVHPREL  517 (541)
Q Consensus       485 ~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  517 (541)
                      + +++.++....  .+........++|++++|..
T Consensus       399 ~~~~l~~~~~~~--~~~~~~g~~~lpv~~~~R~~  430 (433)
T 3ivy_A          399 PDLKPISAPERL--RSGWLNGIKHWQVDYTGRCP  430 (433)
T ss_dssp             TTCEESSCCEEC--CCSSBCCEEECEEESCC---
T ss_pred             CccEECCCCcee--ccCcccCcceeEEEEecccc
Confidence            9 9987543222  22223334578899988754


No 64 
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00  E-value=1.3e-54  Score=428.71  Aligned_cols=370  Identities=15%  Similarity=0.124  Sum_probs=285.1

Q ss_pred             hhHHHHHHHHHHcCCcccccceeeeccCC-cceEEEecCChhhHHHHHhccCCCCCCChhHHHH-H-Hhh--c-cCccee
Q 037522           48 RLHDWISDNLRACGGTYQTCIFAIPVLGR-KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAA-F-HDL--L-GDGIFN  121 (541)
Q Consensus        48 ~~~~~~~~~~~kyG~v~~~~~~~~~~~~~-~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~~~~-~-~~~--~-g~~l~~  121 (541)
                      +++.++.++.+ ||++|+   +  ...|. .+.++|  ++++.++++++++ ..|++++..... . ...  . +.+++.
T Consensus        38 dp~~~~~~lr~-~gpV~~---~--~~~g~~~~~~vv--~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~l~~  108 (415)
T 3mgx_A           38 ERHARWRELAA-EDAMVW---S--DPGSSPSGFWSV--FSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGRMMVV  108 (415)
T ss_dssp             THHHHHHHHHH-HTCCEE---E--CSSSSSSCEEEE--CSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTTSGGG
T ss_pred             ChhHHHHHHHh-cCCEee---c--cCCCCcCCEEEE--ecHHHHHHHHhCh-hhhcCCccccccccccccccccCCCccc
Confidence            57888888776 999866   2  12332 788999  9999999999775 567765432110 0 001  1 456788


Q ss_pred             cCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHH-HHHHHHHHHhhhccCCCCccC
Q 037522          122 SDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLL-LRMTFDNICGLAFGKDPQTLS  200 (541)
Q Consensus       122 ~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~  200 (541)
                      .+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+    ++++|+...+ ..+++++++. +||.+...  
T Consensus       109 ~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~----~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~--  179 (415)
T 3mgx_A          109 SEHEQHRKLRKLVGPLLSRAAARKL-AERVRIEV-GDVLGRVLD----GEVCDAATAIGPRIPAAVVCE-ILGVPAED--  179 (415)
T ss_dssp             CCHHHHHHHHHHHGGGSSHHHHHHS-HHHHHHHH-HHHTTTSSS----SSCEESTTTTTTHHHHHHHHH-HHTCCGGG--
T ss_pred             cCcHHHHHHHHHhHhhhCHHHHHHH-HHHHHHHH-HHHHHHHHh----cCCcchHHHHHHHHHHHHHHH-HcCCCHHH--
Confidence            9999999999999999999999986 89999999 777776643    2479999877 6799999998 57865321  


Q ss_pred             CCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccccccccCCC
Q 037522          201 QGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTT  280 (541)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~~~  280 (541)
                          ...+.+....+..     ...+.       ..+    ....++.+.+.+++.++++++++.               
T Consensus       180 ----~~~~~~~~~~~~~-----~~~~~-------~~~----~~~~~~~~~l~~~~~~~i~~rr~~---------------  224 (415)
T 3mgx_A          180 ----EDMLIDLTNHAFG-----GEDEL-------FDG----MTPRQAHTEILVYFDELITARRKE---------------  224 (415)
T ss_dssp             ----HHHHHHHHHHHTS-----CCC-----------C----CCHHHHHHHHHHHHHHHHHHHHHS---------------
T ss_pred             ----HHHHHHHHHHHHc-----ccCcc-------cch----HHHHHHHHHHHHHHHHHHHHHHhC---------------
Confidence                1223222222111     01110       000    122356778888999988887653               


Q ss_pred             CchhHHHHHhhcCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCcccccCC
Q 037522          281 PHDDLLSRFMKKKESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEP  360 (541)
Q Consensus       281 ~~~~~l~~ll~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~  360 (541)
                      ..+|+++.|++.. .++++++..++..+++||+|||+.+++|++++|+.||++|++|++|+                   
T Consensus       225 ~~~dll~~ll~~~-~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~-------------------  284 (415)
T 3mgx_A          225 PGDDLVSTLVTDD-DLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDGS-------------------  284 (415)
T ss_dssp             CCSSHHHHHHHCT-TSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTS-------------------
T ss_pred             CCCCHHHHHHhCC-CCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCh-------------------
Confidence            3468999999865 69999999999999999999999999999999999999999999873                   


Q ss_pred             CCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccCCCCCCC
Q 037522          361 LVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQ  440 (541)
Q Consensus       361 ~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~  440 (541)
                               ||++++|+|+||++|+++...|.+. +++.++||.||||+.|+++.+++||||++| +||++|||+||.  
T Consensus       285 ---------~~l~a~i~E~LRl~pp~~~~~R~~~-~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~~-~dP~~F~P~R~~--  351 (415)
T 3mgx_A          285 ---------ADVDTVVEEVLRWTSPAMHVLRVTT-ADVTINGRDLPSGTPVVAWLPAANRDPAEF-DDPDTFLPGRKP--  351 (415)
T ss_dssp             ---------SCHHHHHHHHHHHHCCBCEEEEEES-SCEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTCCS--
T ss_pred             ---------HhHHHHHHHHHHhcCcccccceecC-CCeeECCEEECCCCEEEechHHhCCChhhc-CCccccCCCCCC--
Confidence                     4899999999999999986555554 455559999999999999999999999999 999999999973  


Q ss_pred             CCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCCcccceeeeeEEecCCceeEEEeeC
Q 037522          441 DGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPGHRVEQKMSLTLFMKYGLMMNVHPR  515 (541)
Q Consensus       441 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  515 (541)
                                ..++|||+|+|.|+|++||+.|++++++.|+++| ++++.++..  ...+........++|++++|
T Consensus       352 ----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~--~~~~~~~~~~~~lpv~~~~R  415 (415)
T 3mgx_A          352 ----------NRHITFGHGMHHCLGSALARIELSVVLRVLAERVSRVDLEREPA--WLRAIVVQGYRELPVRFTGR  415 (415)
T ss_dssp             ----------CCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEEECSCCE--ECSCSSBCCEEECEEEEEEC
T ss_pred             ----------CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCCccCCCcc--cccCCcccCceeeeEEEecC
Confidence                      2489999999999999999999999999999999 899864332  22233344456788999887


No 65 
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00  E-value=1.5e-53  Score=418.79  Aligned_cols=363  Identities=18%  Similarity=0.185  Sum_probs=284.6

Q ss_pred             hhhHHHHHHHHHHcCCcccccceeeeccCC----cceEEEecCChhhHHHHHhccCCCCCCChhHHHHH-HhhccCccee
Q 037522           47 KRLHDWISDNLRACGGTYQTCIFAIPVLGR----KQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIFN  121 (541)
Q Consensus        47 ~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~----~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~~~~~-~~~~g~~l~~  121 (541)
                      .+++.++.++ ++||++|+   +   .+++    .+.++|  +||+.+++++++. ..|++++...... ....+.+++.
T Consensus        12 ~~p~~~~~~l-r~yGpv~~---~---~~~~~~~g~~~vvv--~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~   81 (384)
T 3oo3_A           12 LDPVPEFEEL-QKAGPLHE---Y---DTEPGMDGRKQWLV--TGHDEVRAILADH-ERFSSMRPVDDEADRALLPGILQA   81 (384)
T ss_dssp             TEECHHHHHH-HHTCSEEC---C---CCC------CEEEE--CCHHHHHHHHHCT-TTEECSCCCC-----CCCTTCGGG
T ss_pred             cChhHHHHHH-HhcCCeee---c---ccccccCCCCEEEE--cCHHHHHHHHhCc-hhccCCcccccccccccccccccc
Confidence            4678888888 59999877   2   4443    788999  9999999999665 7888876543211 1233456788


Q ss_pred             cCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHHHHHHHHHHhhhccCCCCccCC
Q 037522          122 SDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLLRMTFDNICGLAFGKDPQTLSQ  201 (541)
Q Consensus       122 ~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~  201 (541)
                      .+|+.|+++|+++++.|+++.++.+ .+.+.+.+ +.+++.+.+   .++++|+.+.+...+.+.+...+||.+...   
T Consensus        82 ~~g~~~~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~---~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~---  153 (384)
T 3oo3_A           82 YDPPDHTRLRRTVAPAYSARRMERL-RPRIEEIV-EECLDDFES---VGAPVDFVRHAAWPIPAYIACEFLGVPRDD---  153 (384)
T ss_dssp             CCTTHHHHHHHHHGGGGCHHHHHHH-HHHHHHHH-HHHHHHHHH---SCSSEEHHHHTTTHHHHHHHHHHHTCCGGG---
T ss_pred             CCChhHHHHHHHHHHhhCHHHHHHH-HHHHHHHH-HHHHHHHHh---cCCCccHHHHHHHHHHHHHHHHHcCCCHHH---
Confidence            8999999999999999999999996 89999999 888777754   456899999999888888888889987532   


Q ss_pred             CCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccccccccCCCC
Q 037522          202 GLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTP  281 (541)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~  281 (541)
                         ...+.+....+..                    ....++..++.+.+.+++.+.++++++.               .
T Consensus       154 ---~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~i~~~~~~---------------~  195 (384)
T 3oo3_A          154 ---QAELSRMIRESRE--------------------SRLPRQRTLSGLGIVNYTKRLTSGKRRD---------------P  195 (384)
T ss_dssp             ---HHHHHHHHHHHHH--------------------CSCHHHHHHHHHHHHHHHHHHHHHHHHS---------------C
T ss_pred             ---HHHHHHHHHHHhc--------------------cCChHHHHHHHHHHHHHHHHHHHHHHhC---------------C
Confidence               1233333332221                    0112333456678888888888876542               3


Q ss_pred             chhHHHHHhhc-CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCcccccCC
Q 037522          282 HDDLLSRFMKK-KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEP  360 (541)
Q Consensus       282 ~~~~l~~ll~~-~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~  360 (541)
                      ..|+++.+++. ++.++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++.                 
T Consensus       196 ~~d~l~~ll~~~~~~l~~~~l~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~-----------------  258 (384)
T 3oo3_A          196 GDGMIGVIVREHGAEISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPEL-----------------  258 (384)
T ss_dssp             CSSHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGG-----------------
T ss_pred             CCCHHHHHHHhcCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHH-----------------
Confidence            46899998863 445999999999999999999999999999999999999999999998652                 


Q ss_pred             CCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccCCCCCCC
Q 037522          361 LVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQ  440 (541)
Q Consensus       361 ~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~  440 (541)
                                 |+|+|+|+||++|+++...+|.+.+++.++||.||||+.|.++.+++||      +||++|+||||   
T Consensus       259 -----------l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~r------~dp~~F~PeR~---  318 (384)
T 3oo3_A          259 -----------IDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNR------APGDRFDITRE---  318 (384)
T ss_dssp             -----------HHHHHHHHHHHHCSCSCCSCEEESSCEEETTEEECTTCEEEECHHHHHC------CTTCCCCTTCS---
T ss_pred             -----------HHHHHHHHHHhCCcccCCcceeeCCCEEECCEEECCCCEEEEehhhcCC------CCcceeCCCCC---
Confidence                       6899999999999998755555555666699999999999999999999      79999999995   


Q ss_pred             CCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCCc-ccceee-eeEEecCCceeEE
Q 037522          441 DGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPGH-RVEQKM-SLTLFMKYGLMMN  511 (541)
Q Consensus       441 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~-~~~~~~-~~~~~~~~~~~v~  511 (541)
                               +..++|||+|+|.|+|++||..|++++++.|+++| ++++.++. ++.... +...+....++|+
T Consensus       319 ---------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~~lpv~  383 (384)
T 3oo3_A          319 ---------KATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRFPSLRLAVPEEDLRFKPGRPAPFAVEELPLE  383 (384)
T ss_dssp             ---------CCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCEECSSSSCCEESCCEEE
T ss_pred             ---------CCCcCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCCeeCCCCccceeecccccccCcceeeee
Confidence                     23489999999999999999999999999999999 99997653 444443 4444445566664


No 66 
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00  E-value=7.2e-54  Score=428.64  Aligned_cols=380  Identities=17%  Similarity=0.156  Sum_probs=285.2

Q ss_pred             hHHHHHHHHHHcCCcc--cccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChhHHH--------HHHh-----
Q 037522           49 LHDWISDNLRACGGTY--QTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTWQA--------AFHD-----  113 (541)
Q Consensus        49 ~~~~~~~~~~kyG~v~--~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~~~--------~~~~-----  113 (541)
                      ++.++.++ ++|||+|  +   +  ..+|+.+.++|  ++++.++++++++ ..|++++....        ....     
T Consensus        47 p~~~~~~l-r~~gPV~~~~---~--~~~g~~~~~vv--t~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~  117 (450)
T 3tkt_A           47 LLDRFDAL-RAEAPVAKVV---A--PDDEHEPFWLV--SSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGS  117 (450)
T ss_dssp             HHHHHHHH-HHHCSEEEEC---C--TTCSSCCEEEE--CSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSC
T ss_pred             chHHHHHH-HhcCCeeccc---c--cCCCCCCEEEE--ecHHHHHHHHhCc-ccccCCCccccccccccccccccccccc
Confidence            77788777 6799987  5   2  22677899999  9999999999887 67766542110        0011     


Q ss_pred             -hccCcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHH-HHHHHHHHHhhh
Q 037522          114 -LLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLL-LRMTFDNICGLA  191 (541)
Q Consensus       114 -~~g~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~  191 (541)
                       ..+.+++..+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+   .++++|+...+ ..+++++++.+ 
T Consensus       118 ~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~~---~~~~~dl~~~~~~~~~~~vi~~l-  191 (450)
T 3tkt_A          118 PHLVESLVQMDAPKHPKLRRLTQDWFMPKNLARL-DGEIRKIA-NEAIDRMLG---AGEEGDFMALVAAPYPLHVVMQI-  191 (450)
T ss_dssp             SCSSCCGGGCCTTHHHHHHHHHHTTTSHHHHGGG-HHHHHHHH-HHHHHHHHH---TCSEEEHHHHTTTHHHHHHHHHH-
T ss_pred             cccccCcccCCCHHHHHHHHHhhhhhCHHHHHHH-HHHHHHHH-HHHHHHHHh---cCCCEeeHHHHHHHHHHHHHHHH-
Confidence             134578889999999999999999999999886 99999999 888887764   25789998888 69999999996 


Q ss_pred             ccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhh--hccccccccchHHHHHHHHHHHHHHHHHHhcc
Q 037522          192 FGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLR--LGLEVSMGPSLKHIDEYLSDIISTRKLELASR  269 (541)
Q Consensus       192 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~  269 (541)
                      ||.+...      ...+.+....+....     .+ .+.++..++.  ....++..++.+.+.+++.++++++++.    
T Consensus       192 ~G~~~~~------~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~----  255 (450)
T 3tkt_A          192 LGVPPED------EPKMLFLTQQMFGGQ-----DE-DMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRN----  255 (450)
T ss_dssp             TTCCGGG------HHHHHHHHHTTSCCC----------------------HHHHHHHHHHHHHHHHHHHHHHHHHS----
T ss_pred             cCCChhH------HHHHHHHHHHHhccc-----cc-hhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhC----
Confidence            8875421      122333222221100     01 1111111110  0123445566778888888888887653    


Q ss_pred             ccccccccCCCCchhHHHHHhhc---CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhh
Q 037522          270 DREQGEAATTTPHDDLLSRFMKK---KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLL  346 (541)
Q Consensus       270 ~~~~~~~~~~~~~~~~l~~ll~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~  346 (541)
                                 ..+|+++.|++.   ++.++++++.+++..+++||+|||+.+++|++++|+.||++|++|++|+     
T Consensus       256 -----------~~~dll~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~-----  319 (450)
T 3tkt_A          256 -----------PTDDVATVIANAVVDGEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADR-----  319 (450)
T ss_dssp             -----------CCSSHHHHHHTCEETTEECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG-----
T ss_pred             -----------CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCH-----
Confidence                       346899998863   3359999999999999999999999999999999999999999999884     


Q ss_pred             hhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCcc
Q 037522          347 ETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWG  426 (541)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~  426 (541)
                                             +|++++|+|+||++|+++.. +|.+.+++.++||.||||+.|.++.+++||||++| 
T Consensus       320 -----------------------~~l~a~i~E~LRl~pp~~~~-~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~-  374 (450)
T 3tkt_A          320 -----------------------NLLPGIVEEAIRWTTPVQHF-MRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQF-  374 (450)
T ss_dssp             -----------------------GGHHHHHHHHHHHHCSBCEE-EEEESSSEEETTEEECTTCEEEEEHHHHHTCTTTS-
T ss_pred             -----------------------HHHHHHHHHHHHhCCCccCc-ceeeCCCeeECCEEECCCCEEEEChHHhcCChhhC-
Confidence                                   27899999999999999954 45444555569999999999999999999999999 


Q ss_pred             CCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhce-EEEeCCcccceeeeeEEecC
Q 037522          427 EDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYH-LTVVPGHRVEQKMSLTLFMK  505 (541)
Q Consensus       427 ~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~  505 (541)
                      +||++|||||+.            ..++|||+|+|.|+|++||++|++++++.|+++|+ +++.++..  ...+...+..
T Consensus       375 ~dP~~F~PeR~~------------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~--~~~~~~~~g~  440 (450)
T 3tkt_A          375 PEPRKFDPTRPA------------NRHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRVDSLELAGEPK--RVNSTFVGGF  440 (450)
T ss_dssp             SSTTSCCTTSCT------------TCSSTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEEESSCCE--ECCCSSBCCE
T ss_pred             CCcCeeCCCCCC------------CCCCCCCCcCccCccHHHHHHHHHHHHHHHHHhCCCceeCCCcc--cccCcccCCc
Confidence            999999999942            24899999999999999999999999999999998 67653322  2222233334


Q ss_pred             CceeEEEee
Q 037522          506 YGLMMNVHP  514 (541)
Q Consensus       506 ~~~~v~~~~  514 (541)
                      ..++|++++
T Consensus       441 ~~lpv~~~~  449 (450)
T 3tkt_A          441 KSLPMRWKA  449 (450)
T ss_dssp             EECEEEEEE
T ss_pred             ccceEEEec
Confidence            567777764


No 67 
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00  E-value=3.6e-54  Score=424.63  Aligned_cols=358  Identities=17%  Similarity=0.243  Sum_probs=271.1

Q ss_pred             HHHHcCCcccccceeeeccC-Cc---ceEEEecCChhhHHHHH-hccCCCCCCChh------HH--HHHH-hhccCccee
Q 037522           56 NLRACGGTYQTCIFAIPVLG-RK---QGLVTVTCDPKNVEHIL-KARFDNYPKGPT------WQ--AAFH-DLLGDGIFN  121 (541)
Q Consensus        56 ~~~kyG~v~~~~~~~~~~~~-~~---~~vvv~~~dp~~i~~v~-~~~~~~~~~~~~------~~--~~~~-~~~g~~l~~  121 (541)
                      ++++ |++|+   +   .++ +.   +.++|  +||+.+++++ .+  ..|++++.      ..  .... ...+.+++.
T Consensus        22 l~~~-Gpv~~---~---~~~~g~~~~~~vvv--~~~~~v~~vl~~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   90 (398)
T 1lfk_A           22 LLAA-GALTR---V---TIGSGADAETHWMA--TAHAVVRQVMGDH--QQFSTRRRWDPRDEIGGKGIFRPRELVGNLMD   90 (398)
T ss_dssp             HHTS-CSEEE---E---C------CCCEEEE--CSHHHHHHHHHCT--TTEEECTTCCC-------------CCTTCGGG
T ss_pred             HHhc-CCccc---c---ccCCCCcccceEEE--ecHHHHHHHHhhC--cccccccccccccccCCcccccccccccCccc
Confidence            4554 99876   2   332 34   78999  9999999999 54  34665543      11  1111 123567888


Q ss_pred             cCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHHH-HHHHHHHhhhccCCCCccC
Q 037522          122 SDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLLR-MTFDNICGLAFGKDPQTLS  200 (541)
Q Consensus       122 ~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~-~~~~~~~~~~fG~~~~~~~  200 (541)
                      .+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+.+   .++++|+.+.+.. ++.++++. +||.+...  
T Consensus        91 ~~g~~~~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--  162 (398)
T 1lfk_A           91 YDPPEHTRLRRKLTPGFTLRKMQRM-APYIEQIV-NDRLDEMER---AGSPADLIAFVADKVPGAVLCE-LVGVPRDD--  162 (398)
T ss_dssp             CCTTHHHHHHHHHGGGGCHHHHHHH-HHHHHHHH-HHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG--
T ss_pred             cCCHHHHHHHHHHHhhhCHHHHHHH-HHHHHHHH-HHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCCCHHH--
Confidence            8999999999999999999999986 99999999 888887753   3567999999986 88999987 58987531  


Q ss_pred             CCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccccccccCCC
Q 037522          201 QGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTT  280 (541)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~~~  280 (541)
                          ...+.+....+.       ..+            ...++..++.+.+.+++.+.++++++.               
T Consensus       163 ----~~~~~~~~~~~~-------~~~------------~~~~~~~~~~~~~~~~~~~~i~~r~~~---------------  204 (398)
T 1lfk_A          163 ----RDMFMKLCHGHL-------DAS------------LSQKRRAALGDKFSRYLLAMIARERKE---------------  204 (398)
T ss_dssp             ----HHHHHHHHHHTT-------CTT------------SCHHHHHHHHHHHHHHHHHHHHHHHHS---------------
T ss_pred             ----HHHHHHHHHHHH-------hcc------------cchHHHHHHHHHHHHHHHHHHHHHHhC---------------
Confidence                122222222111       001            011233456677888888888887653               


Q ss_pred             CchhHHHHHhhc-CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCcccccC
Q 037522          281 PHDDLLSRFMKK-KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEE  359 (541)
Q Consensus       281 ~~~~~l~~ll~~-~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~  359 (541)
                      ...|+++.|++. ++.++++++.+++..+++||+|||+.+++|++++|+.||++|++|++|++                 
T Consensus       205 ~~~dll~~ll~~~~~~l~~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------  267 (398)
T 1lfk_A          205 PGEGMIGAVVAEYGDDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ-----------------  267 (398)
T ss_dssp             CCSSHHHHHHHHHGGGSCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH-----------------
T ss_pred             CCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH-----------------
Confidence            235788888863 33589999999999999999999999999999999999999999998753                 


Q ss_pred             CCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccCCCCCC
Q 037522          360 PLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLS  439 (541)
Q Consensus       360 ~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~  439 (541)
                                 ||+|+|+|+||++|+++...+|.+.+++.++||.|||||.|.++.+++||||++| +||++|+||||. 
T Consensus       268 -----------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-  334 (398)
T 1lfk_A          268 -----------SAQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALA-PDVDRLDVTREP-  334 (398)
T ss_dssp             -----------HHHHHHHHHHHHHCCBSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTC-TTTTSCCTTSCC-
T ss_pred             -----------HHHHHHHHHHHhCcccccccceecCCCeeECCEEECCCCEEEeChHHhCCCchhc-CCccccCCCCCC-
Confidence                       6899999999999999955445445555569999999999999999999999999 999999999983 


Q ss_pred             CCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCC-cccceeeeeEEecCCceeEE
Q 037522          440 QDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPG-HRVEQKMSLTLFMKYGLMMN  511 (541)
Q Consensus       440 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~  511 (541)
                                 ..++|||+|+|.|+|++||+.|++++++.|+++| ++++.++ .++.+..+...+....++|+
T Consensus       335 -----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~  397 (398)
T 1lfk_A          335 -----------IPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPALRLADPAQDTEFRLTTPAYGLTELMVA  397 (398)
T ss_dssp             -----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSTTCCCEEECSSSBCEEEECEEE
T ss_pred             -----------CCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCCCCEeCCCCCccccccCcCcCCcccceee
Confidence                       2389999999999999999999999999999999 7998643 34444434333333444443


No 68 
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00  E-value=7.3e-53  Score=417.98  Aligned_cols=374  Identities=16%  Similarity=0.149  Sum_probs=281.2

Q ss_pred             hhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChhHH-----H-----HHHhhccC
Q 037522           48 RLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTWQ-----A-----AFHDLLGD  117 (541)
Q Consensus        48 ~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~~-----~-----~~~~~~g~  117 (541)
                      +++.++.++.++ ||+++   +  ...++.+.++|  ++++.++++++++ ..|++++...     .     ......+.
T Consensus        39 ~p~~~~~~lr~~-gpv~~---~--~~~~~~~~~vv--t~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~  109 (426)
T 3rwl_A           39 SVGEYFKRLRKD-DPVHY---C--ADSAFGPYWSI--TKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLP  109 (426)
T ss_dssp             CHHHHHHHHHHH-CSEEE---E--SCCTTCSEEEE--CSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCC
T ss_pred             CccHHHHHHHhc-CCeee---c--cCCCCCCEEEE--cCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccC
Confidence            578888888765 99865   2  22356678999  9999999999987 6676654210     0     11122345


Q ss_pred             cceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHH-HHHHHHHHHhhhccCCC
Q 037522          118 GIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLL-LRMTFDNICGLAFGKDP  196 (541)
Q Consensus       118 ~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~  196 (541)
                      +++..+|+.|+++|+++++.|+++.++.+ .+.+.+.+ +.+++.+.    .++++|+...+ ..++.++++. +||.+.
T Consensus       110 ~l~~~dg~~h~~~R~~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l~----~~~~~dl~~~~~~~~~~~vi~~-l~G~~~  182 (426)
T 3rwl_A          110 NFIAMDRPRHDEQRKAVSPIVAPANLAAL-EGTIRERV-SKTLDGLP----VGEEFDWVDRVSIEITTQMLAT-LFDFPF  182 (426)
T ss_dssp             CGGGCCTTHHHHHHHHHGGGGCHHHHHHH-HHHHHHHH-HHHHHTSC----SSSCEEHHHHTHHHHHHHHHHH-HHTCCG
T ss_pred             cccccCchHHHHHHHHhhhhhCHHHHHHH-HHHHHHHH-HHHHHHhh----cCCCcchHHHHHHHHHHHHHHH-HcCCCH
Confidence            68889999999999999999999999996 89999888 77766552    35689987777 5788888876 899754


Q ss_pred             CccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccccccc
Q 037522          197 QTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEA  276 (541)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~  276 (541)
                      ..      ...+..+..    ...   ..+..       ......+...++.+++.+++.++++++++.           
T Consensus       183 ~~------~~~~~~~~~----~~~---~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----------  231 (426)
T 3rwl_A          183 EE------RRKLTRWSD----VTT---AAPGG-------GVVESWDQRKTELLECAAYFQVLWNERVNK-----------  231 (426)
T ss_dssp             GG------THHHHHHHH----HHT---CCTTS-------SSCSSHHHHHHHHHHHHHHHHHHHHHHHTS-----------
T ss_pred             HH------HHHHHHHHH----HHH---hccCc-------cccccHHHHHHHHHHHHHHHHHHHHHHhhc-----------
Confidence            22      122222211    111   11100       000111223345577888888888776321           


Q ss_pred             cCCCCchhHHHHHhhc--CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCc
Q 037522          277 ATTTPHDDLLSRFMKK--KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVS  354 (541)
Q Consensus       277 ~~~~~~~~~l~~ll~~--~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~  354 (541)
                         ...+|+++.|++.  .+.++++++.++++.+++||+|||+.+++|++++|+.||++|++|++|+             
T Consensus       232 ---~~~~dll~~ll~~~~~~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~-------------  295 (426)
T 3rwl_A          232 ---DPGNDLISMLAHSPATRNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANP-------------  295 (426)
T ss_dssp             ---CCCSSHHHHHHHCGGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG-------------
T ss_pred             ---CCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCh-------------
Confidence               3457899999863  2348999999999999999999999999999999999999999999872             


Q ss_pred             ccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccC
Q 037522          355 KWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKP  434 (541)
Q Consensus       355 ~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p  434 (541)
                                     +|++++|+|+||++|+++...|.+. +++.++||.||||+.|+++.+++||||++| +||++|||
T Consensus       296 ---------------~~l~a~i~E~LRl~p~~~~~~R~~~-~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~f-~dP~~F~p  358 (426)
T 3rwl_A          296 ---------------ALVETMVPEIIRWQTPLAHMRRTAI-ADSELGGKTIRKGDKVVMWYYSGNRDDEVI-DRPEEFII  358 (426)
T ss_dssp             ---------------GGHHHHHHHHHHHHCSBCCEEEEES-SCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCT
T ss_pred             ---------------HhHHHHHHHHHHhcCccccCceecC-CCeEECCEEECCCCEEEechHHhCCCcccc-CCcCccCC
Confidence                           2799999999999999988544444 555559999999999999999999999999 99999999


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCCcccceeeeeEEecCCceeEEEe
Q 037522          435 ERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPGHRVEQKMSLTLFMKYGLMMNVH  513 (541)
Q Consensus       435 ~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  513 (541)
                      +||.+           ..++|||+|+|.|+|++||..|++++++.|+++| ++++.++..+  ..+........++|+++
T Consensus       359 ~R~~~-----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~--~~~~~~~g~~~lpv~~~  425 (426)
T 3rwl_A          359 DRPRP-----------RQHLSFGFGIHRCVGNRLAEMQLRILWEEILTRFSRIEVMAEPER--VRSNFVRGYAKMMVRVH  425 (426)
T ss_dssp             TCSCT-----------TCCSTTCCSTTSCSSHHHHHHHHHHHHHHHHTTCSEEEECSCCEE--CCCSSBCCEEECEEEEE
T ss_pred             CCCCC-----------CCccCCCCCCcCCccHHHHHHHHHHHHHHHHHhCccCeeCCCCcc--cccccccCcceeeEEEe
Confidence            99942           3489999999999999999999999999999999 9998754332  22333344456778776


Q ss_pred             e
Q 037522          514 P  514 (541)
Q Consensus       514 ~  514 (541)
                      |
T Consensus       426 P  426 (426)
T 3rwl_A          426 A  426 (426)
T ss_dssp             C
T ss_pred             C
Confidence            5


No 69 
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00  E-value=5.1e-54  Score=422.96  Aligned_cols=362  Identities=13%  Similarity=0.126  Sum_probs=273.6

Q ss_pred             hhHHHHHHHHHHcCCcccccceeeecc-CCcceEEEecCChhhHHHHHhccCCCCC-C-ChhH--HHH----HHhhccCc
Q 037522           48 RLHDWISDNLRACGGTYQTCIFAIPVL-GRKQGLVTVTCDPKNVEHILKARFDNYP-K-GPTW--QAA----FHDLLGDG  118 (541)
Q Consensus        48 ~~~~~~~~~~~kyG~v~~~~~~~~~~~-~~~~~vvv~~~dp~~i~~v~~~~~~~~~-~-~~~~--~~~----~~~~~g~~  118 (541)
                      +++.++.++ ++||++|+   +   .+ ++.+.+++  +||+.+++++.++  .|. + ++..  ...    +....+.+
T Consensus        17 ~p~~~~~~l-~~yGpv~~---~---~~~g~~~~vvv--~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~   85 (396)
T 1n40_A           17 RIPDAVAEL-RTREPIRK---V---RTITGAEAWLV--SSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNN   85 (396)
T ss_dssp             SCCHHHHHH-HHHCSEEE---E---ECTTSCEEEEE--CSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGH
T ss_pred             CccHHHHHH-HHhCCeeE---e---ecCCCceEEEE--ecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhh
Confidence            577888899 99999876   3   44 67889999  9999999999875  365 4 3321  100    01113445


Q ss_pred             ceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHH-HHHHHHHHHhhhccCCCC
Q 037522          119 IFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLL-LRMTFDNICGLAFGKDPQ  197 (541)
Q Consensus       119 l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~  197 (541)
                      ++..   .|+++|+++++.|+++ ++.+ .+.+.+++ +.+++.+.+   .++++|+...+ ..+++++++. +||.+..
T Consensus        86 l~~~---~h~~~R~~~~~~fs~~-~~~~-~~~i~~~~-~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~  155 (396)
T 1n40_A           86 MGNI---ADAGLRKAVMKAITPK-APGL-EQFLRDTA-NSLLDNLIT---EGAPADLRNDFADPLATALHCK-VLGIPQE  155 (396)
T ss_dssp             HHHH---HHTTCHHHHHHHTSSC-STTH-HHHHHHHH-HHHHHHHHH---HCSCEETTTTTHHHHHHHHHHH-HHTCCGG
T ss_pred             hhhH---HHHHHHHHHHHhhChH-HHHh-HHHHHHHH-HHHHHHHHh---cCCCccHHHHHHHHhHHHHHHH-HhCCChh
Confidence            6555   9999999999999998 8886 89999999 888887764   15679998655 5899999998 7998753


Q ss_pred             ccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhcccccccccc
Q 037522          198 TLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAA  277 (541)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~  277 (541)
                      .      ...+.+....+....   ...|              .++..++.+.+ +++.+.++       ..        
T Consensus       156 ~------~~~~~~~~~~~~~~~---~~~p--------------~~~~~~~~~~~-~~~~~~i~-------~~--------  196 (396)
T 1n40_A          156 D------GPKLFRSLSIAFMSS---ADPI--------------PAAKINWDRDI-EYMAGILE-------NP--------  196 (396)
T ss_dssp             G------HHHHHHTHHHHTBCC---SSCC--------------HHHHHHHHHHH-HHHHHHHH-------CT--------
T ss_pred             h------HHHHHHHHHHHhccc---cCCC--------------HHHHHHHHHHH-HHHHHHHh-------CC--------
Confidence            1      123333222211100   0011              11223344445 55555554       11        


Q ss_pred             CCCCchhHHHHHhhc-----CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCC
Q 037522          278 TTTPHDDLLSRFMKK-----KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRD  352 (541)
Q Consensus       278 ~~~~~~~~l~~ll~~-----~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~  352 (541)
                        ....|+++.|++.     +..++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++          
T Consensus       197 --~~~~dll~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~----------  264 (396)
T 1n40_A          197 --NITTGLMGELSRLRKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE----------  264 (396)
T ss_dssp             --TCCSHHHHHHHHHHTSGGGTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG----------
T ss_pred             --CCCCCHHHHHHHhhcccccCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCHH----------
Confidence              1246899988852     33599999999999999999999999999999999999999999998732          


Q ss_pred             CcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCc
Q 037522          353 VSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEF  432 (541)
Q Consensus       353 ~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F  432 (541)
                                        ||+|+|+|+||++|+++...+|.+.+++.++||.|||||.|+++.+++||||++| +||++|
T Consensus       265 ------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F  325 (396)
T 1n40_A          265 ------------------LIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHF-PNPGSI  325 (396)
T ss_dssp             ------------------GHHHHHHHHHHTCCCBCSCEEEEESSCEEETTEEECTTCEEEECHHHHHTCTTTS-SSTTSC
T ss_pred             ------------------HHHHHHHHHHhhCCCcccccceecCCCeeECCEEECCCCEEEechHHhhCChhhC-CChhhC
Confidence                              7899999999999999955555555556669999999999999999999999999 999999


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCC-cccceeeeeEEecCCceeE
Q 037522          433 KPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPG-HRVEQKMSLTLFMKYGLMM  510 (541)
Q Consensus       433 ~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v  510 (541)
                      +||||.+           ..++|||+|+|.|+|++||+.|++++++.|+++| ++++.++ .++.+..+...+...+++|
T Consensus       326 ~PeR~~~-----------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv  394 (396)
T 1n40_A          326 ELDRPNP-----------TSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPIDQLVWRTRFQRRIPERLPV  394 (396)
T ss_dssp             CTTCSST-----------TCSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSBSBCCBSCCEE
T ss_pred             CCCCCCC-----------CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCccccccCCccccccccccccCCcceeee
Confidence            9999963           2489999999999999999999999999999999 5998765 3444555555566677777


Q ss_pred             E
Q 037522          511 N  511 (541)
Q Consensus       511 ~  511 (541)
                      +
T Consensus       395 ~  395 (396)
T 1n40_A          395 L  395 (396)
T ss_dssp             E
T ss_pred             e
Confidence            5


No 70 
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00  E-value=9.2e-53  Score=409.35  Aligned_cols=352  Identities=16%  Similarity=0.152  Sum_probs=271.8

Q ss_pred             HHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChh-HHHHH-----H-hhcc----Cc
Q 037522           50 HDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPT-WQAAF-----H-DLLG----DG  118 (541)
Q Consensus        50 ~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~-~~~~~-----~-~~~g----~~  118 (541)
                      +..+.++ ++||++|+   +   .  +  .+++  ++|+.+++++.++ ..|++++. +...+     . .+.|    .+
T Consensus         2 ~~~~~~l-r~~gpv~~---~---~--g--~~vv--~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (367)
T 3b4x_A            2 YDWFKQM-RKESPVYY---D---G--K--VWNL--FKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYT   67 (367)
T ss_dssp             HHHHHHH-HHHCSEEE---C---S--S--SEEE--CSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSS
T ss_pred             CHHHHHH-HHcCCcee---e---C--C--EEEE--ecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccc
Confidence            3445555 57999866   2   2  2  7888  9999999999986 57877642 21011     2 3445    67


Q ss_pred             ceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHH-HHHHHHHHHhhhccCCCC
Q 037522          119 IFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLL-LRMTFDNICGLAFGKDPQ  197 (541)
Q Consensus       119 l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~  197 (541)
                      ++..+|+.|+++|+++++.|+++.++.   +.+.+.+ +.+++.+.     + ++|+...+ ..+++++++. +||.+ .
T Consensus        68 l~~~dg~~h~~~R~~~~~~fs~~~l~~---~~i~~~~-~~l~~~l~-----g-~~d~~~~~~~~~~~~vi~~-~~G~~-~  135 (367)
T 3b4x_A           68 MLTSDPPLHDELRNLTADAFNPSNLPV---DFVREVT-VKLLSELD-----E-EFDVIESFAIPLPILVISK-MLGIN-P  135 (367)
T ss_dssp             GGGCCTTHHHHHHHTTGGGGSGGGSCH---HHHHHHH-HHHHHTCC-----S-EEEHHHHTTTHHHHHHHHH-HHTCC-C
T ss_pred             cccCCchhHHHHHHHHHHhcCHhhhcc---hHHHHHH-HHHHHhcc-----C-CcchHHHHHHhhHHHHHHH-HcCCC-C
Confidence            888899999999999999999988765   7777777 66666553     3 49999765 7999999999 79987 3


Q ss_pred             ccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhcccccccccc
Q 037522          198 TLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAA  277 (541)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~  277 (541)
                      .      ...+......+....     .+         .+. ..+.. ++.+.+.+++.+.++++++.            
T Consensus       136 ~------~~~~~~~~~~~~~~~-----~~---------~p~-~~~~~-~~~~~~~~~~~~~i~~r~~~------------  181 (367)
T 3b4x_A          136 D------VKKVKDWSDLVALRL-----GR---------ADE-IFSIG-RKYLELISFSKKELDSRKGK------------  181 (367)
T ss_dssp             C------HHHHHHHHHHHHTTT-----TS---------TTG-GGCCC-HHHHHHHHHHHHHHHHHTTT------------
T ss_pred             c------HHHHHHHHHHHHhcc-----CC---------Chh-hHHHH-HHHHHHHHHHHHHHHHHhcC------------
Confidence            1      233444333222110     01         111 11222 67778888888888776532            


Q ss_pred             CCCCchhHHHHHhhcCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCcccc
Q 037522          278 TTTPHDDLLSRFMKKKESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWV  357 (541)
Q Consensus       278 ~~~~~~~~l~~ll~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~  357 (541)
                         ...|+++.|++.  .++++++.+++..+++||+|||+.+++|++++|+. |++|++|++|++               
T Consensus       182 ---~~~dll~~ll~~--~ls~~el~~~~~~l~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~---------------  240 (367)
T 3b4x_A          182 ---EIVDLTGKIANS--NLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTL-YNSWDYVREKGA---------------  240 (367)
T ss_dssp             ---CCSSHHHHHHTS--SSCHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHCS---------------
T ss_pred             ---CCCCHHHHHHhc--cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCCc---------------
Confidence               346899999976  58999999999999999999999999999999999 999999999832               


Q ss_pred             cCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccCCCC
Q 037522          358 EEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERW  437 (541)
Q Consensus       358 ~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf  437 (541)
                                     +++|+|+||++|+++...|.+ .+++.++||.||||+.|.++.+++||||++| +||++||||||
T Consensus       241 ---------------~a~i~E~lRl~p~~~~~~R~~-~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~  303 (367)
T 3b4x_A          241 ---------------LKAVEEALRFSPPVMRTIRVT-KEKVKIRDQVIDEGELVRVWIASANRDEEVF-KDPDSFIPDRT  303 (367)
T ss_dssp             ---------------HHHHHHHHHHSCSBCCEEEEE-SSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCS
T ss_pred             ---------------hHHHHHHHHhcCcccCeeEEe-CCCeEECCEEECCCCEEEEChhhhcCCcccC-CCccccCCCCC
Confidence                           699999999999999545555 4555569999999999999999999999999 99999999998


Q ss_pred             CCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCCcccceeeeeEEecCCceeEEEee
Q 037522          438 LSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPGHRVEQKMSLTLFMKYGLMMNVHP  514 (541)
Q Consensus       438 ~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  514 (541)
                      .            ..++|||+|+|.|+|++||+.|++++++.|+++| ++++.++   .+..+.......+++|++++
T Consensus       304 ~------------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~---~~~~~~~~~~~~~lpv~~~~  366 (367)
T 3b4x_A          304 P------------NPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKK---EKIDNEVLNGYRKLVVRVER  366 (367)
T ss_dssp             S------------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEE---EECCCSSBCSEEEEEEEEEE
T ss_pred             C------------CCCcCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCceeCCc---cccccccccCcceEEEEecC
Confidence            4            2489999999999999999999999999999999 6998764   33334444556678888764


No 71 
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00  E-value=1e-52  Score=409.78  Aligned_cols=354  Identities=18%  Similarity=0.223  Sum_probs=267.2

Q ss_pred             HHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChh-----HHHHH-Hh--h---ccCc
Q 037522           50 HDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPT-----WQAAF-HD--L---LGDG  118 (541)
Q Consensus        50 ~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~-----~~~~~-~~--~---~g~~  118 (541)
                      +..+.++ ++||++|+       . |  +.+++  ++++.+++++.++ ..|++++.     +.... ..  +   .|.+
T Consensus         2 ~~~~~~l-r~~Gpv~~-------~-g--~~~vv--~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~   67 (368)
T 1io7_A            2 YDWFSEM-RKKDPVYY-------D-G--NIWQV--FSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYT   67 (368)
T ss_dssp             HHHHHHH-HHHCSEEE-------C-S--SCEEE--CSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSS
T ss_pred             CHHHHHH-HhcCCeEe-------E-C--CEEEE--ecHHHHHHHHcCc-ccccccccccccccccccccccccccccccc
Confidence            3455566 58999865       2 3  47888  9999999999986 57888764     22110 11  1   2267


Q ss_pred             ceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHH-HHHHHHHHHhhhccCCCC
Q 037522          119 IFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLL-LRMTFDNICGLAFGKDPQ  197 (541)
Q Consensus       119 l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~  197 (541)
                      ++..+|+.|+++|+++++.|+++.++.+ .+.+.+++ +.+++.+ +   . +++|+.+.+ ..+++++++.+ ||.+..
T Consensus        68 ~~~~~g~~h~~~R~~~~~~f~~~~~~~~-~~~i~~~~-~~l~~~l-~---~-g~~d~~~~~~~~~~~~vi~~~-~G~~~~  139 (368)
T 1io7_A           68 MLTSDPPLHDELRSMSADIFSPQKLQTL-ETFIRETT-RSLLDSI-D---P-REDDIVKKLAVPLPIIVISKI-LGLPIE  139 (368)
T ss_dssp             GGGCCTTHHHHHHGGGTTTTCHHHHHHH-HHHHHHHH-HHHHHTC-C---T-TSEEHHHHTTTHHHHHHHHHH-HTCCGG
T ss_pred             cccCCChHHHHHHHHHHhhcCHHHHHHH-HHHHHHHH-HHHHHHh-h---c-CCccHHHHHHHHHHHHHHHHH-hCCCHH
Confidence            8888999999999999999999999986 89999998 7777766 2   2 369999876 78999999999 998753


Q ss_pred             ccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhcccccccccc
Q 037522          198 TLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAA  277 (541)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~  277 (541)
                      .      ...+.+....+..    ....|.            ..++..++.+.+.+++.+.+         .        
T Consensus       140 ~------~~~~~~~~~~~~~----~~~~p~------------~~~~~~~~~~~~~~~~~~~i---------~--------  180 (368)
T 1io7_A          140 D------KEKFKEWSDLVAF----RLGKPG------------EIFELGKKYLELIGYVKDHL---------N--------  180 (368)
T ss_dssp             G------HHHHHHHGGGCTT----SCCCTT------------CHHHHHHHHHHHHHHHHHHT---------T--------
T ss_pred             H------HHHHHHHHHHHHh----ccCChH------------HHHHHHHHHHHHHHHHHHHh---------C--------
Confidence            2      1122221111000    000010            01122223344444444443         1        


Q ss_pred             CCCCchhHHHHHhhcCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCcccc
Q 037522          278 TTTPHDDLLSRFMKKKESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWV  357 (541)
Q Consensus       278 ~~~~~~~~l~~ll~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~  357 (541)
                         ...|+++.|++.  .++++++.+++..+++||+|||+.+++|++++|++|| +|+++++|  .              
T Consensus       181 ---~~~d~l~~ll~~--~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E--~--------------  238 (368)
T 1io7_A          181 ---SGTEVVSRVVNS--NLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE--N--------------  238 (368)
T ss_dssp             ---SSCHHHHHHHTS--SCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH--T--------------
T ss_pred             ---CCCCHHHHHHhc--cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc--c--------------
Confidence               235899999976  5899999999999999999999999999999999999 99999998  1              


Q ss_pred             cCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccCCCC
Q 037522          358 EEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERW  437 (541)
Q Consensus       358 ~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf  437 (541)
                                   |++|+|+|+||++|+++. .+|.+.+++.++||.||||+.|.++.+++||||++| +||++|+|||+
T Consensus       239 -------------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~  303 (368)
T 1io7_A          239 -------------LYLKAIEEALRYSPPVMR-TVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVF-HDGEKFIPDRN  303 (368)
T ss_dssp             -------------CHHHHHHHHHHHSCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-TTTTSCCTTCC
T ss_pred             -------------hHHHHHHHHHHhCccccc-CceeeCCCeeECCEEECCCCEEEecHhhhCCChhhC-CCcceeCCCCC
Confidence                         589999999999999995 445445555569999999999999999999999999 99999999993


Q ss_pred             CCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhce-EEEeCCcccceeeeeEEecCCceeEEEeeCC
Q 037522          438 LSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYH-LTVVPGHRVEQKMSLTLFMKYGLMMNVHPRE  516 (541)
Q Consensus       438 ~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  516 (541)
                        .          ..++|||+|+|.|+|++||+.|++++++.|+++|+ +++.+   ..+..+.......+++|++++|+
T Consensus       304 --~----------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~---~~~~~~~~~~~~~~lpv~~~~r~  368 (368)
T 1io7_A          304 --P----------NPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILD---TEKVPNEVLNGYKRLVVRLKSNE  368 (368)
T ss_dssp             --S----------CCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHTTCSEEEEEE---EEECCCSSBCCEEEEEEEEEC--
T ss_pred             --C----------CCCcCCCCCccCCCCHHHHHHHHHHHHHHHHHhCCCCEecC---ceeccCCcccCCceeEEEeccCC
Confidence              1          24899999999999999999999999999999996 99875   22233344556678999999884


No 72 
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00  E-value=9.1e-52  Score=406.37  Aligned_cols=368  Identities=15%  Similarity=0.161  Sum_probs=274.7

Q ss_pred             hhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChhHHHHHHh--hccCcceecCCh
Q 037522           48 RLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAFHD--LLGDGIFNSDGD  125 (541)
Q Consensus        48 ~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~~~~~~~--~~g~~l~~~~g~  125 (541)
                      +++.++.++++ +||+++   .   ..   ..++|  ++++.++++++++  .|+.++.+... ..  ..+.+++..+|+
T Consensus        21 dp~~~~~~lr~-~~pv~~---~---~~---g~~~v--~~~~~v~~~l~d~--~fs~~~~~~~~-~~~~~~~~~l~~~dg~   85 (394)
T 2wiy_A           21 NPYPWYRRLQQ-DHPVHK---L---ED---GTYLV--SRYADVSHFAKLP--IMSVEPGWADA-GPWAVASDTALGSDPP   85 (394)
T ss_dssp             CCHHHHHHHHH-HCSEEE---C---TT---SCEEE--CCHHHHHHHTTST--TEECHHHHHTC-GGGGGGGGSGGGCCTT
T ss_pred             CccHHHHHHHh-cCCeEE---e---cC---CeEEE--cCHHHHHHHHcCC--Ccccccccccc-ccchhcccccccCCch
Confidence            46777777755 579855   1   22   25788  9999999999764  46554322111 11  124568889999


Q ss_pred             hHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHHHHHHHHHHhhhccCCCCccCCCCCc
Q 037522          126 TWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLLRMTFDNICGLAFGKDPQTLSQGLPE  205 (541)
Q Consensus       126 ~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~  205 (541)
                      .|+++|+++++.|+++.++.+ .+.+.+.+ +.+++.+.    .++++|+...+..+++++++..+||.+...      .
T Consensus        86 ~h~~~R~~~~~~fs~~~~~~~-~~~i~~~~-~~l~~~~~----~~~~~d~~~~~~~~~~~vi~~~~~G~~~~~------~  153 (394)
T 2wiy_A           86 HHTVLRRQTNKWFTPKLVDGW-VRTTRELV-GDLLDGVE----AGQVIEARRDLAVVPTHVTMARVLQLPEDD------A  153 (394)
T ss_dssp             HHHHHHHHHHTTCSHHHHHHH-THHHHHHH-HHHHHTCC----TTCCEEHHHHHTHHHHHHHHHHHHTCCCCC------H
T ss_pred             HHHHHHHHHHhccCHHHHHHH-HHHHHHHH-HHHHHHHh----ccCCeeHHHHHHhhhHHHHHHHHcCCCHhH------H
Confidence            999999999999999999986 89998888 76666553    356799999999999999999999986421      1


Q ss_pred             chHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccccccccCCCCchhH
Q 037522          206 NSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDL  285 (541)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~  285 (541)
                      ..+.+...   ..+......|..          ....+..++.+.+.+++.++++++++.               ..+|+
T Consensus       154 ~~~~~~~~---~~~~~~~~~p~~----------~~~~~~~~~~~~l~~~~~~~i~~rr~~---------------~~~dl  205 (394)
T 2wiy_A          154 DAVMEAMF---EAMLMQSAEPAD----------GDVDRAAVAFGYLSARVAEMLEDKRVN---------------PGDGL  205 (394)
T ss_dssp             HHHHHHHH---HHHGGGSSSCCT----------THHHHHHHHHHHHHHHHHHHHHHHHHS---------------CCSSH
T ss_pred             HHHHHHHH---HHHHhccCCccc----------hHHHHHHHHHHHHHHHHHHHHHHhhcC---------------CCCcH
Confidence            22322221   111111111100          001122335567777888888777632               23578


Q ss_pred             HHHHhh--cCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCcccccCCCCH
Q 037522          286 LSRFMK--KKESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVF  363 (541)
Q Consensus       286 l~~ll~--~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~  363 (541)
                      ++.|++  +.+.++++++.++++.+++||+|||+.+++|++++|++||++|+++++|+                      
T Consensus       206 l~~Ll~~~~~~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~----------------------  263 (394)
T 2wiy_A          206 ADSLLDAARAGEITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRNDE----------------------  263 (394)
T ss_dssp             HHHHHHHHHTTSSCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHCHHHHHHHHHCG----------------------
T ss_pred             HHHHHHhhhcCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHCHHHHHHHHhCh----------------------
Confidence            888875  23359999999999999999999999999999999999999999999873                      


Q ss_pred             HhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccCCCCCCCCCC
Q 037522          364 EEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGN  443 (541)
Q Consensus       364 ~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~  443 (541)
                            +|++++|+|+||++||++...|.+ .+++.++||.||||+.|.++.+++||||++| +||++|||+||++.   
T Consensus       264 ------~~l~a~i~E~LRl~pp~~~~~R~~-~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~-~dP~~F~p~R~~~~---  332 (394)
T 2wiy_A          264 ------SARAAIINEMVRMDPPQLSFLRFP-TEDVEIGGVLIEAGSPIRFMIGAANRDPEVF-DDPDVFDHTRPPAA---  332 (394)
T ss_dssp             ------GGHHHHHHHHHHHSCSBCEEEEEE-SSCEEETTEEECTTCCEEEEHHHHTTCTTTS-SSTTSCCTTCCGGG---
T ss_pred             ------HhHHHHHHHHHhhCCCccCeeEEE-CCCEEEcCeecCCCCEEEeChHhhcCCcccC-CCccccCCCCCCCC---
Confidence                  268999999999999998655544 5555559999999999999999999999999 99999999999742   


Q ss_pred             CCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhce-EEEeCCcccceeeeeEEecCCceeEEE
Q 037522          444 KYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYH-LTVVPGHRVEQKMSLTLFMKYGLMMNV  512 (541)
Q Consensus       444 ~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~v~~  512 (541)
                             ..++|||+|+|.|+|++||++|++++++.|+++|+ +++.++..  +..+...+....++|++
T Consensus       333 -------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~~~--~~~~~~~~g~~~lpv~~  393 (394)
T 2wiy_A          333 -------SRNLSFGLGPHSCAGQIISRAEATTVFAVLAERYERIELAEEPT--VAHNDFARRYRKLPIVL  393 (394)
T ss_dssp             -------SCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSCEEESSCCE--ECCCSSBCCEEECEEEE
T ss_pred             -------CCccCCCCCCCcCCcHHHHHHHHHHHHHHHHHhCCCceECCCCc--ccccccccCcceeeEEe
Confidence                   24899999999999999999999999999999998 99875332  22233334445566654


No 73 
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00  E-value=5.1e-52  Score=411.19  Aligned_cols=369  Identities=19%  Similarity=0.230  Sum_probs=275.3

Q ss_pred             hhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChhHH-H-------HHHhhccCcc
Q 037522           48 RLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTWQ-A-------AFHDLLGDGI  119 (541)
Q Consensus        48 ~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~~-~-------~~~~~~g~~l  119 (541)
                      +++.+  +..++||++++   +   .++... ++|  ++++.++++++++  .+....... .       ......+.++
T Consensus        34 ~P~~~--~~lr~~gpv~~---~---~~g~~~-~vv--~~~~~v~~vL~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l  100 (416)
T 3p3o_A           34 FSWDS--PEVAEAREKSW---I---ARTPLA-LLV--LRYAEADQLARDK--RLISGFRGLVDMVGTPEGPVRDFMVDFL  100 (416)
T ss_dssp             CCTTS--HHHHHHHHHCS---E---EECSSS-EEE--CSHHHHHHHHHCT--TEECSHHHHHHHHTCCSSHHHHHHHHSG
T ss_pred             CCchH--HHHHHhCCccc---c---ccCCCc-eEE--eCHHHHHHHHcCc--ccccCCccccccccccccchhhhhcCcc
Confidence            35555  44567999877   3   334444 788  9999999999886  344332211 1       0112235678


Q ss_pred             eecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHH-HHHHHHHHHhhhccCCCCc
Q 037522          120 FNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLL-LRMTFDNICGLAFGKDPQT  198 (541)
Q Consensus       120 ~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~  198 (541)
                      +..+|+.|+++|+++++.|+++.++.+ .+.+.+.+ +.+++.+ .    .+.+|+...+ ..+++++++. +||.+...
T Consensus       101 ~~~dg~~h~~~Rr~~~~~fs~~~l~~~-~~~i~~~~-~~ll~~l-~----~g~~d~~~~~~~~~~~~vi~~-l~G~~~~~  172 (416)
T 3p3o_A          101 QSLDGADHRRLRGLATHPFTPRRITAV-QPFVRSTV-EQLIDKL-P----QGDFDFVQHFPHPLPALVMCQ-LLGFPLED  172 (416)
T ss_dssp             GGCCHHHHHHHHHTTCGGGSHHHHHHH-HHHHHHHH-HHHHHTC-C----SSSEEHHHHTTTHHHHHHHHH-HHTCCGGG
T ss_pred             ccCCchHHHHHHHHHHHhhCHHHHHHH-HHHHHHHH-HHHHHhh-c----cCCccHHHHHHHHHHHHHHHH-HhCCCHHH
Confidence            889999999999999999999999996 99999998 7777766 2    2459976555 5699999998 57875421


Q ss_pred             cCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccccccccC
Q 037522          199 LSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAAT  278 (541)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~  278 (541)
                            ...+......+..    ..... .        .....++..++.+.+.+++.++++++++.             
T Consensus       173 ------~~~~~~~~~~~~~----~~~~~-~--------~~~~~~~~~~~~~~l~~~~~~~i~~rr~~-------------  220 (416)
T 3p3o_A          173 ------YDTVGRLSIETNL----GLALS-N--------DQDILVKVEQGLGRMFDYLVAAIEKRKVE-------------  220 (416)
T ss_dssp             ------HHHHHHHHHTTCG----GGTTC-S--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHS-------------
T ss_pred             ------HHHHHHHHHHHHh----hcccc-c--------chhhHHHHHHHHHHHHHHHHHHHHHHHhC-------------
Confidence                  1222222211111    00000 0        00112344566788888999988887653             


Q ss_pred             CCCchhHHHHHhhc--CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCccc
Q 037522          279 TTPHDDLLSRFMKK--KESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKW  356 (541)
Q Consensus       279 ~~~~~~~l~~ll~~--~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~  356 (541)
                        ..+|+++.|++.  .+.++++++.+++..+++||+|||+.+++|++++|++||++|++|++|++              
T Consensus       221 --~~~dll~~ll~~~~~~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~--------------  284 (416)
T 3p3o_A          221 --PGDDLTSDIVRAFHDGVLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE--------------  284 (416)
T ss_dssp             --CCSSHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG--------------
T ss_pred             --CCccHHHHHHHhhccCCCCHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH--------------
Confidence              346788888852  22699999999999999999999999999999999999999999998732              


Q ss_pred             ccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccCCC
Q 037522          357 VEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPER  436 (541)
Q Consensus       357 ~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~R  436 (541)
                                    |++++|+|+||++|++|...+|.+.+++.++||.||||+.|+++.+++||||++| +||++|||+|
T Consensus       285 --------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~-~dp~~F~p~R  349 (416)
T 3p3o_A          285 --------------LAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVF-ADADRFDITV  349 (416)
T ss_dssp             --------------GHHHHHHHHHHHSCSCSSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTC-TTTTSCCTTC
T ss_pred             --------------HHHHHHHHHHhhccccccCcceEeCCCeEECCEEECCCCEEEEChHHhcCChhcc-CCccccCCCC
Confidence                          6899999999999999666666666666679999999999999999999999999 9999999999


Q ss_pred             CCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhce-EEEeCCcccceeeeeEEecCCceeEEEe
Q 037522          437 WLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYH-LTVVPGHRVEQKMSLTLFMKYGLMMNVH  513 (541)
Q Consensus       437 f~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~  513 (541)
                      |.+           ..++|||+|+|.|+|++||+.|++++++.|+++|+ +++.++.  .+..+...+....++|++.
T Consensus       350 ~~~-----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~~~~~~~~g~~~lpv~~~  414 (416)
T 3p3o_A          350 KRE-----------APSIAFGGGPHFCLGTALARLELTEAVAALATRLDPPQIAGEI--TWRHELGVAGPDALPLRFG  414 (416)
T ss_dssp             CCS-----------SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSCCEEECSCC--EECCCTTCCCEEECEEEES
T ss_pred             CCC-----------CCeecCCCCCccCcCHHHHHHHHHHHHHHHHHhCCccccCCCC--ceecCCCccCcceeeEEEe
Confidence            742           24899999999999999999999999999999995 8886544  2333333333455667664


No 74 
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00  E-value=7.5e-52  Score=399.57  Aligned_cols=319  Identities=15%  Similarity=0.187  Sum_probs=244.1

Q ss_pred             HHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChhHHHHHHhhccCcceecCChhHHHHHhhhcCC
Q 037522           58 RACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAFHDLLGDGIFNSDGDTWLFQRKTAALE  137 (541)
Q Consensus        58 ~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~g~~w~~~R~~~~~~  137 (541)
                      ++|||+|+       .  +  .++|  +||+.+++++.++ ..|++++..... .. .+.+++..+|+.|+++|+++++.
T Consensus         2 r~~gpv~~-------~--g--~~vv--~~~~~v~~vl~~~-~~f~~~~~~~~~-~~-~~~~l~~~~g~~~~~~R~~~~~~   65 (343)
T 2rfb_A            2 RLNDPVHY-------D--G--AWHV--YKYSDVKHVLMND-KIFSSNPGNRYS-NA-GGISFITMDNPEHKEFRDISAPY   65 (343)
T ss_dssp             -CCCCEEE-------T--T--EEEE--CSHHHHHHHHHCT-TTEESSCSSCCC-----CCGGGGCCHHHHHHHHHHHHHH
T ss_pred             CCcCCeee-------e--C--eEEE--cCHHHHHHHHhCh-hhcccCCcCCCC-Cc-cccccccCCchHHHHHHHHhhhh
Confidence            58999865       2  2  7788  9999999999986 567776521111 12 36778888999999999999999


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHH-HHHHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHH
Q 037522          138 FTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLL-LRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRAT  216 (541)
Q Consensus       138 ~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  216 (541)
                      |+++.++.+ .+.+.+++ +.+++.+.       ++|+.+.+ ..+++++++.+ ||.+...      ...+.+....+.
T Consensus        66 fs~~~l~~~-~~~i~~~~-~~l~~~l~-------~~d~~~~~~~~~~~~vi~~~-~G~~~~~------~~~~~~~~~~~~  129 (343)
T 2rfb_A           66 FLPSKINDY-KDFIEETS-NDLIKNID-------NKDIISEYAVRLPVNIISKI-LGIPDSD------MPLFKLWSDYII  129 (343)
T ss_dssp             HSHHHHGGG-HHHHHHHH-HHHHTTCT-------TSCHHHHTTTHHHHHHHHHH-HTCCGGG------HHHHHHHHHHHH
T ss_pred             cCHHHHHHH-HHHHHHHH-HHHHHhcc-------ccCHHHHHhhhhhHHHHHHH-cCCCHHH------HHHHHHHHHHHh
Confidence            999999886 89999888 77766654       68998865 89999999998 9986531      123333322211


Q ss_pred             HHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccccccccCCCCchhHHHHHhhc---C
Q 037522          217 EATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKK---K  293 (541)
Q Consensus       217 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~---~  293 (541)
                      .     ...|.. ..         .++. ++.+.+.+++.+++                      ..| ++.|++.   +
T Consensus       130 ~-----~~~p~~-~~---------~~~~-~~~~~~~~~~~~~i----------------------~~d-l~~ll~~~~~~  170 (343)
T 2rfb_A          130 G-----NKRDEN-FN---------YVNN-RMVSRLLEIFKSDS----------------------HGI-INVLAGSSLKN  170 (343)
T ss_dssp             T-----SCCSSH-HH---------HHHH-HHHHHHHHHHHSCC----------------------SSH-HHHHHTCBCSS
T ss_pred             h-----ccCcch-hh---------HHHH-HHHHHHHHHHHHHH----------------------hcc-HHHHHhhhcCC
Confidence            1     011110 00         0111 22233333332222                      245 7777753   3


Q ss_pred             CCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHH
Q 037522          294 ESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLK  373 (541)
Q Consensus       294 ~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~  373 (541)
                      ..++++++.+++..+++||+|||+.+++|++++|++||++|+++++|+                               +
T Consensus       171 ~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~-------------------------------~  219 (343)
T 2rfb_A          171 RKLTMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKNR-------------------------------S  219 (343)
T ss_dssp             SBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHCH-------------------------------H
T ss_pred             CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHcCc-------------------------------H
Confidence            358999999999999999999999999999999999999999999874                               4


Q ss_pred             HHHhhhhcCCCCC-CCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCcc
Q 037522          374 AALSETLRLYPSV-PQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYK  452 (541)
Q Consensus       374 a~i~EtlRl~p~~-~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~  452 (541)
                      |+|+|+||++|++ +...|.+ .+++.++||.||||+.|.++.+++||||++| +||++|+|||+             ..
T Consensus       220 a~i~E~lRl~p~~~~~~~R~~-~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~-~dp~~F~PeR~-------------~~  284 (343)
T 2rfb_A          220 GFVEETLRYYSPIQFLPHRFA-AEDSYINNKKIKKGDQVIVYLGSANRDETFF-DEPDLFKIGRR-------------EM  284 (343)
T ss_dssp             HHHHHHHHHSCSBCCBCCCEE-SSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCS-------------SC
T ss_pred             HHHHHHHhhCcccccccceEE-CCCeEECCEEECCCCEEEEChhhhCCCcccC-CCccccCCCCC-------------CC
Confidence            8999999999999 8544445 4555569999999999999999999999999 99999999994             13


Q ss_pred             ccccCCCCcccchHHHHHHHHHHHHHHHHhhce-EEEeCCcc
Q 037522          453 FVAFNAGPRICLGKDLAYLQMKSIAAEVLLRYH-LTVVPGHR  493 (541)
Q Consensus       453 ~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~  493 (541)
                      ++|||+|+|.|+|++||+.|++++++.|+++|+ +++.++++
T Consensus       285 ~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~  326 (343)
T 2rfb_A          285 HLAFGIGIHMCLGAPLARLEASIALNDILNHFKRIKIDYKKS  326 (343)
T ss_dssp             CCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCSCCCBCTTTC
T ss_pred             CccCCCCCccCCChHHHHHHHHHHHHHHHHhCCCceeCCCcc
Confidence            799999999999999999999999999999997 99876433


No 75 
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00  E-value=5.5e-49  Score=388.40  Aligned_cols=382  Identities=13%  Similarity=0.086  Sum_probs=267.8

Q ss_pred             CCCCCcCC---ChhhhhccchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChh
Q 037522           30 PRVWPLLG---SLPGLFQNSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPT  106 (541)
Q Consensus        30 P~~~P~lG---~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~  106 (541)
                      +.++|.+|   ....+..   +++.++.+++ ++|||++        ..+..+++|  ++++.++++++++ ..|+....
T Consensus        17 ~~~~P~~~~dp~~~~~~~---dP~~~~~~lR-~~gPV~~--------~~~~~~~~v--t~~~~v~~vl~d~-~~fs~~~~   81 (412)
T 4dnj_A           17 GAGVPHLGIDPFALDYFA---DPYPEQETLR-EAGPVVY--------LDKWNVYGV--ARYAEVYAVLNDP-LTFCSSRG   81 (412)
T ss_dssp             STTSCEECCCTTSHHHHH---SCHHHHHHHH-HHCSSEE--------ETTTTEEEE--CSHHHHHHHHTCT-TTEESTTC
T ss_pred             CCCCCccCCCCCCHHHHh---CcHHHHHHHH-hcCCEEE--------ECCCCEEEE--CCHHHHHHHHcCC-ccccCCCc
Confidence            34677776   2344544   5777877765 5799844        345677888  9999999999876 45543321


Q ss_pred             HH--HHHH--h-hccCcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeH-HHHHH
Q 037522          107 WQ--AAFH--D-LLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDF-QDLLL  180 (541)
Q Consensus       107 ~~--~~~~--~-~~g~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl-~~~~~  180 (541)
                      ..  ....  . ..+..++..||+.|+++|++++++|+++.++.+ .+.+.+.+ +.+++.+..   .++++|+ .++..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~Dg~~H~r~R~~~~~~Fs~~~l~~~-~~~i~~~~-~~l~~~~~~---~~~~~D~v~~~~~  156 (412)
T 4dnj_A           82 VGLSDFKKEKPWRPPSLILEADPPAHTRTRAVLSKVLSPATMKRL-RDGFAAAA-DAKIDELLA---RGGNIDAIADLAE  156 (412)
T ss_dssp             SSSSCTTTSCCSSCCCTTTTCCTTHHHHHHHHHHHHTCHHHHHHH-HHHHHHHH-HHHHHHHHH---TTSEEETCCCCCC
T ss_pred             cccccccccccccCCCccccCChHHHHHHHhhcccccCHHHHHHh-hHHHHHHH-HHHHHhhhc---cCCCceeHHHHHh
Confidence            10  0000  0 112456788999999999999999999999997 99999988 777666543   3456775 45556


Q ss_pred             HHHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHH
Q 037522          181 RMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIIS  260 (541)
Q Consensus       181 ~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  260 (541)
                      .+.+++++.++ |.....      ...+..+...+....    .....               ..+........+...+.
T Consensus       157 ~~~~~~i~~l~-g~~~~~------~~~~~~~~~~~~~~~----~~~~~---------------~~~~~~~~~~~~~~~~~  210 (412)
T 4dnj_A          157 AYPLSVFPDAM-GLKQEG------RENLLPYAGLVFNAF----GPPNE---------------LRQSAIERSAPHQAYVA  210 (412)
T ss_dssp             HHHHHHHHHHH-TCCSTT------GGGHHHHHHHHHHHT----SCSSH---------------HHHHHHHTCHHHHHHHH
T ss_pred             hhhHhHHHHHc-CCchhh------hhhhhhhhhcccccc----cccHH---------------HHHHHHHHHHHHHHHHH
Confidence            77788887765 433221      123333222221110    00000               00001111111222222


Q ss_pred             HHHHHHhccccccccccCCCCchhHHHHHh---hcCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHH
Q 037522          261 TRKLELASRDREQGEAATTTPHDDLLSRFM---KKKESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKI  337 (541)
Q Consensus       261 ~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll---~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l  337 (541)
                      ++.+.   .          ....+.+..++   .++..++++++.+++..+++||+|||+.+++|++++|++||++|++|
T Consensus       211 ~~~~~---~----------~~~~~~~~~l~~~~~~~~~l~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~L  277 (412)
T 4dnj_A          211 EQCQR---P----------NLAPGGFGACIHAFSDTGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARL  277 (412)
T ss_dssp             HHTSG---G----------GSCTTSHHHHHHHTTTTTSSCTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred             HHHHh---h----------ccccccchhhhHhhhhccchhHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHH
Confidence            22111   1          11122233333   24456999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhh
Q 037522          338 ATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYA  417 (541)
Q Consensus       338 r~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~  417 (541)
                      ++|.                            .++.++++|++|++|+++...|.+.+|.+ ++||.||||+.|.++.++
T Consensus       278 r~~~----------------------------~~~~~~~eE~lR~~pp~~~~~R~a~~d~~-l~G~~Ip~G~~V~~~~~a  328 (412)
T 4dnj_A          278 RADP----------------------------SLARNAFEEAVRFESPVQTFFRTTTRDVE-LAGATIGEGEKVLMFLGS  328 (412)
T ss_dssp             HHCG----------------------------GGHHHHHHHHHHHHCSBCEEEEEESSCEE-ETTEEECTTCEEEEEHHH
T ss_pred             HhCc----------------------------cccccccceeeeecCCcccccccCCCCeE-ECCccCCCCCeEEeehhh
Confidence            8752                            26789999999999999877766666555 599999999999999999


Q ss_pred             hccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCCcccce
Q 037522          418 IGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPGHRVEQ  496 (541)
Q Consensus       418 ~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~  496 (541)
                      +||||++| +||++||||||.            ..|+|||+|+|.|+|++||++|++++|+.|+++| ++++.++  ..+
T Consensus       329 ~~rDp~~f-~dP~~F~PeR~~------------~~~lpFG~G~r~CiG~~lA~~E~~~~l~~Ll~rf~~~~l~~~--~~~  393 (412)
T 4dnj_A          329 ANRDPRRW-DDPDRYDITRKT------------SGHVGFGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIAGP--LKR  393 (412)
T ss_dssp             HTTCTTTS-SSTTSCCTTSCC------------TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEECSC--CEE
T ss_pred             ccCChhhC-CCccccCCCCCC------------CCCCCcCCCCcCChhHHHHHHHHHHHHHHHHHHCCCCeECCC--Cee
Confidence            99999999 999999999973            2389999999999999999999999999999999 8998654  334


Q ss_pred             eeeeEEecCCceeEEEee
Q 037522          497 KMSLTLFMKYGLMMNVHP  514 (541)
Q Consensus       497 ~~~~~~~~~~~~~v~~~~  514 (541)
                      ..+.++++..+++|+++|
T Consensus       394 ~~~~~~rg~~~LpV~~tP  411 (412)
T 4dnj_A          394 RFNNTLRGLESLPIQLTP  411 (412)
T ss_dssp             EECSSBEEEEECEEEEEE
T ss_pred             ecCCCccCCcceeEEEEe
Confidence            445555666789999886


No 76 
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00  E-value=3.2e-45  Score=360.54  Aligned_cols=369  Identities=13%  Similarity=0.112  Sum_probs=257.0

Q ss_pred             hhHHHHHHHHHHcCC-cccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCCChhHHHHH-HhhccCcceecCCh
Q 037522           48 RLHDWISDNLRACGG-TYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPKGPTWQAAF-HDLLGDGIFNSDGD  125 (541)
Q Consensus        48 ~~~~~~~~~~~kyG~-v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~~~~~~~~~-~~~~g~~l~~~~g~  125 (541)
                      +++..+.+++++.++ +     +..+  .+....+|  ++++.+++|++++ ..|+......... ....+..+...|++
T Consensus        38 ~~~~~~~~lr~~~~~~~-----~~~~--~~gg~W~v--tr~~dv~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~D~p  107 (417)
T 4dxy_A           38 GYHEAWKKVQHPGIPDL-----IWTP--FTGGHWIA--TNGDTVKEVYSDP-TRFSSEVIFLPKEAGEKAQMVPTKMDPP  107 (417)
T ss_dssp             CHHHHHHHHSCTTCCSE-----EEES--STTSEEEE--CSHHHHHHHHTCT-TTEESSCCSSSTTSSCSSCTTTTTCCTT
T ss_pred             ChHHHHHHHHhhCCCCE-----EecC--CCCCEEEE--CCHHHHHHHHcCc-hhccCCCcccccccccccccCcccCCcH
Confidence            577777776654433 3     2112  22346778  9999999999886 6676543221100 01112345667999


Q ss_pred             hHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeHHHHHH-HHHHHHHHhhhccCCCCccCCCCC
Q 037522          126 TWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDFQDLLL-RMTFDNICGLAFGKDPQTLSQGLP  204 (541)
Q Consensus       126 ~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fG~~~~~~~~~~~  204 (541)
                      +|+++|++++++|+++.++.+ .+.+++.+ +.+++.+..    .+++|+...+. .+...+++. ++|.....      
T Consensus       108 ~H~r~Rrll~~~Fs~~~l~~~-~~~i~~~~-~~lld~l~~----~g~~D~v~~~a~~l~~~vi~~-llg~~~~d------  174 (417)
T 4dxy_A          108 EHTPYRKALDKGLNLAKIRKV-EDKVREVA-SSLIDSFAA----RGECDFAAEYAELFPVHVFMA-LADLPLED------  174 (417)
T ss_dssp             THHHHHHHHHHHHCHHHHHTT-HHHHHHHH-HHHHHHHHT----TSEEEHHHHTTTTHHHHHHHH-HTTCCGGG------
T ss_pred             HHHHHHHHhhhhcCHHHHHHH-HHHHHHHH-HHHHHHhhh----cCCeeeHHHHHhhhHHHHHHH-HcCCCHHH------
Confidence            999999999999999999997 99999998 777776643    35788766654 455555554 56764321      


Q ss_pred             cchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHHHHHHHHHHHHHHhccccccccccCCCCchh
Q 037522          205 ENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEYLSDIISTRKLELASRDREQGEAATTTPHDD  284 (541)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~  284 (541)
                      ...+.+....+.   ......+.           ........+.+.+.+++.++++++++               ...+|
T Consensus       175 ~~~~~~~~~~~~---~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~li~~rr~---------------~~~dd  225 (417)
T 4dxy_A          175 IPVLSEYARQMT---RPEGNTPE-----------EMATDLEAGNNGFYAYVDPIIRARVG---------------GDGDD  225 (417)
T ss_dssp             HHHHHHHHHHHH---SCCCSSHH-----------HHHHHHHHHHHHHHHHHHHHHHHHTT---------------CCCCS
T ss_pred             HHHHHhhhhhhc---cccccChH-----------HHHHHHHHHHHHHHHHHHHHHHHHhc---------------CCccc
Confidence            122222221111   00111110           01122334556777777777776643               24568


Q ss_pred             HHHHHhh---cCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhhhhcCCCCcccccCCC
Q 037522          285 LLSRFMK---KKESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVEDKIATEICTVLLETRGRDVSKWVEEPL  361 (541)
Q Consensus       285 ~l~~ll~---~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~  361 (541)
                      +++.|+.   ++..++++++.+++..+++||+|||+++++|++++|+.||++++++++|...+.                
T Consensus       226 l~s~L~~~~~~~~~~~~~e~~~~~~~ll~AG~eTTa~~l~~~~~~L~~~P~~~~~l~~e~~~~~----------------  289 (417)
T 4dxy_A          226 LITLMVNSEINGERIAHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKLM----------------  289 (417)
T ss_dssp             HHHHHHTCEETTEECCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHHHHHCHHHHH----------------
T ss_pred             hhhhhccccccCCccchhHHHHHHHHHHhhcccchhhHHHHHHHHHHhCchhhhhhccCccccc----------------
Confidence            8888885   344599999999999999999999999999999999999999999999865431                


Q ss_pred             CHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEehhhhccCCCCccCCCCCccCCCCCCCC
Q 037522          362 VFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYSIYAIGRMKFIWGEDCLEFKPERWLSQD  441 (541)
Q Consensus       362 ~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~~~~~h~d~~~~~~~p~~F~p~Rf~~~~  441 (541)
                                  .+ .|.+|++++++...|.+ .+++.++|+.||||+.|.++.+++||||++| +||++|||+|+    
T Consensus       290 ------------~a-vee~~~~~~~~~~~R~a-~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f-~dP~~FdpeR~----  350 (417)
T 4dxy_A          290 ------------RG-AEEMFRRFPVVSEARMV-AKDQEYKGVFLKRGDMILLPTALHGLDDAAN-PEPWKLDFSRR----  350 (417)
T ss_dssp             ------------HT-HHHHHHHSCCBEEEEEE-CSCEEETTEEECTTCEEEEETHHHHTCTTTS-SSTTSCCTTCS----
T ss_pred             ------------cc-eeeeecccccccccccc-ccceEecCccccCCCEEEEeehhhcCChhhC-CCccccCCCCC----
Confidence                        22 24445555555554444 5555569999999999999999999999999 99999999993    


Q ss_pred             CCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCCcccceeeeeEEecCCceeEEE
Q 037522          442 GNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPGHRVEQKMSLTLFMKYGLMMNV  512 (541)
Q Consensus       442 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~  512 (541)
                              +..|+|||+|+|.|+|++||++|++++|+.||++| ++++.+++..... +...+....++|++
T Consensus       351 --------~~~~l~FG~G~r~ClG~~LA~~E~~i~l~~Ll~rfp~~~l~~~~~~~~~-~~~~~g~~~LPv~~  413 (417)
T 4dxy_A          351 --------SISHSTFGGGPHRCAGMHLARMEVIVTLEEWLKRIPEFSFKEGETPIYH-SGIVAAVENVPLVW  413 (417)
T ss_dssp             --------CCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSSCEECTTCCCEEE-CSSBCEEECCEEEC
T ss_pred             --------CCCCCCcCCCcccCccHHHHHHHHHHHHHHHHHhCCCceeCCCCCeeec-CCcccCceeeeEEe
Confidence                    23489999999999999999999999999999999 8998766543222 22233334566665


No 77 
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00  E-value=1.1e-43  Score=341.33  Aligned_cols=314  Identities=12%  Similarity=0.125  Sum_probs=210.0

Q ss_pred             CCC-CCCCCcCCChhhhhc--cchhhHHHHHHHHHHcCCcccccceeeeccCCcceEEEecCChhhHHHHHhccCCCCCC
Q 037522           27 LSG-PRVWPLLGSLPGLFQ--NSKRLHDWISDNLRACGGTYQTCIFAIPVLGRKQGLVTVTCDPKNVEHILKARFDNYPK  103 (541)
Q Consensus        27 ~pg-P~~~P~lG~~~~~~~--~~~~~~~~~~~~~~kyG~v~~~~~~~~~~~~~~~~vvv~~~dp~~i~~v~~~~~~~~~~  103 (541)
                      ||| +.+||++|+...++.  ...+++.++.+++++  ++|+        .. .+.+++  ++++.+++++.++  .|++
T Consensus        36 ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~--------~~-~~~~vv--~~~~~v~~vl~d~--~f~~  100 (381)
T 2yjn_B           36 IRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRR--------SR-TETWVV--ADHATARQVLDDP--AFTR  100 (381)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEE--------CS-SSCEEE--CSHHHHHHHHHCS--SEES
T ss_pred             CCcccccccccCCchhhcCchhccCchHHHHHHHhC--Ccee--------CC-CCEEEE--cCHHHHHHHHcCC--CcCC
Confidence            555 336899998866532  124678888888865  8755        11 457888  9999999999873  5665


Q ss_pred             Chh-H-HH------HHHhhccCcceecCChhHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhhhHHHHhhhcCcceeH
Q 037522          104 GPT-W-QA------AFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILEVAQLEAKPVDF  175 (541)
Q Consensus       104 ~~~-~-~~------~~~~~~g~~l~~~~g~~w~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~l~~~l~~~~~~~~~vdl  175 (541)
                      .+. + ..      .+.. ++.+++..||+.|       ++.|+     .  .+.+++.+ +.+++.+.      +++|+
T Consensus       101 ~~~~~~~~~~~~~~~~~~-~~~~l~~~dg~~H-------~~~Ft-----~--~~~i~~~~-~~ll~~~~------g~~Dl  158 (381)
T 2yjn_B          101 ATGRTPEWMRAAGAPPAE-WAQPFRDVHAASW-------EGEVP-----D--VGELAESF-AGLLPGAG------ARLDL  158 (381)
T ss_dssp             SCCCCCHHHHHHTCCHHH-HTHHHHHHHHCCC-------CSCCC-----C--CSCHHHHT-STTSCC------------C
T ss_pred             Ccccccccccccccccch-hhhhhhhCCchhh-------hhccC-----C--hHHHHHHH-HHHHHhcc------CcchH
Confidence            532 1 11      0111 2456777899999       67777     1  46677777 77777664      36888


Q ss_pred             HHHH-HHHHHHHHHhhhccCCCCccCCCCCcchHHHHHHHHHHHHHHhhhchHHHHHHHHHhhhccccccccchHHHHHH
Q 037522          176 QDLL-LRMTFDNICGLAFGKDPQTLSQGLPENSFAVAFDRATEATLQRFLLPQAIWKLRKYLRLGLEVSMGPSLKHIDEY  254 (541)
Q Consensus       176 ~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~  254 (541)
                      ...+ ..+++++++.+ ||.+...        .  ++...+....              .+ +.. .    ...++..  
T Consensus       159 ~~~~a~~l~~~vi~~l-~G~~~~~--------~--~~~~~~~~~~--------------~~-~~~-~----~~~~~~~--  205 (381)
T 2yjn_B          159 VGDFAWQVPVQGMTAV-LGAAGVL--------R--GAAWDARVSL--------------DA-QLS-P----QQLAVTE--  205 (381)
T ss_dssp             CCCCCTHHHHHHHHTC------CC--------H--HHHHHHTTHH--------------HH-TTS-C----CCHHHHH--
T ss_pred             HHHHHHHHHHHHHHHH-cCCCHHH--------H--HHHHHHHHhc--------------cC-CCC-H----HHHHHHH--
Confidence            8665 69999999995 9987532        1  1111111000              00 000 0    0000000  


Q ss_pred             HHHHHHHHHHHHhccccccccccCCCCchhHHHHHhhcCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHhcChHHH
Q 037522          255 LSDIISTRKLELASRDREQGEAATTTPHDDLLSRFMKKKESYSDEFLQHVALNFILAGRDTSSVAMSWFFWLVSQNPRVE  334 (541)
Q Consensus       255 ~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~  334 (541)
                                                   +.+..+++           ++++.+++||+|||+.+++|++++|+.||+++
T Consensus       206 -----------------------------~~~~~l~~-----------~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~  245 (381)
T 2yjn_B          206 -----------------------------AAVAALPA-----------DPALRALFAGAEMTANTVVDAVLAVSAEPGLA  245 (381)
T ss_dssp             -----------------------------HHHHHCC-------------CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred             -----------------------------HHHHHHHH-----------HHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHH
Confidence                                         01111111           67888999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhhcCCCCcccccCCCCHHhhhcchhHHHHHhhhhcCCCCCCCCccccccCccccCCcccCCCCEEEEe
Q 037522          335 DKIATEICTVLLETRGRDVSKWVEEPLVFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVSDDVLPTGTFVPAGSTVTYS  414 (541)
Q Consensus       335 ~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~~~~~~~~~~~g~~Ip~Gt~v~~~  414 (541)
                      ++|++|++                            |++++|+|+||++|+++...|.+ .+++.++|+.||||+.|+++
T Consensus       246 ~~l~~e~~----------------------------~l~~~i~E~LR~~pp~~~~~R~a-~~d~~l~G~~Ip~G~~V~~~  296 (381)
T 2yjn_B          246 ERIADDPA----------------------------AAQRTVAEVLRLHPALHLERRTA-TAEVRLGEHVIGEGEEVVVV  296 (381)
T ss_dssp             HHHHHCCC------------------------------HHHHHHHHHHSCSCSEEEEEE-SSCEESSSCEECTTCEEEEE
T ss_pred             HHHhhCHH----------------------------HHHHHhCeeeeecCCCcceeEEE-CCCeEECCEEECCCCEEEeC
Confidence            99998732                            78999999999999998755444 45566699999999999999


Q ss_pred             hhhhccCCCCccCCCCCccCCCCCCCCCCCCCCCCCccccccCCCCcccchHHHHHHHHHHHHHHHHhhc-eEEEeCCc
Q 037522          415 IYAIGRMKFIWGEDCLEFKPERWLSQDGNKYEGHDQYKFVAFNAGPRICLGKDLAYLQMKSIAAEVLLRY-HLTVVPGH  492 (541)
Q Consensus       415 ~~~~h~d~~~~~~~p~~F~p~Rf~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~  492 (541)
                      .+++||||++| +||++|||+||.+           ..++|||+| |.|+|++||+.|++++++.|+++| ++++.++.
T Consensus       297 ~~~~~rDp~~~-~dp~~F~p~R~~~-----------~~~l~FG~G-h~C~G~~lA~~e~~~~l~~ll~~~p~~~l~~~~  362 (381)
T 2yjn_B          297 VAAANRDPEVF-AEPDRLDVDRPDA-----------DRALSAHRG-HPGRLEELVTALATAALRAAAKALPGLTPSGPV  362 (381)
T ss_dssp             HHHHTTCTTTS-SSTTSCCSSCSCC-----------CCCCC-----CCSSHHHHHHHHHHHHHHHTTTTCCC-----CC
T ss_pred             HHHHcCCcccC-CCccccCCCCCCC-----------CCccCCCCC-CCCchHHHHHHHHHHHHHHHHHhCCCcEECCCC
Confidence            99999999999 9999999999973           248999999 999999999999999999999999 99987654


No 78 
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=27.08  E-value=51  Score=16.14  Aligned_cols=13  Identities=23%  Similarity=0.325  Sum_probs=10.1

Q ss_pred             HHHHHHHHHHHHH
Q 037522          332 RVEDKIATEICTV  344 (541)
Q Consensus       332 ~~~~~lr~Ei~~~  344 (541)
                      .+|.++|.|+.+-
T Consensus         8 nlqkkirkelkqr   20 (26)
T 1m46_B            8 NLQKKIRKELKQR   20 (26)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            5688999998753


No 79 
>1yvw_A PRA-PH, phosphoribosyl-ATP pyrophosphatase; helix bundle, histidine biosynthesis, structural genomics, PSI, protein structure initiative; 2.60A {Bacillus cereus} SCOP: a.204.1.4
Probab=24.10  E-value=1.4e+02  Score=22.26  Aligned_cols=27  Identities=11%  Similarity=0.142  Sum_probs=15.9

Q ss_pred             HHHHHHHHHHHhcChHHHHHHHHHHHH
Q 037522          317 SVAMSWFFWLVSQNPRVEDKIATEICT  343 (541)
Q Consensus       317 ~~~l~~~l~~L~~~P~~~~~lr~Ei~~  343 (541)
                      +-++.+++..|...---.+.+.+|+.+
T Consensus        64 ADLlYHllVlL~~~gv~l~dV~~eL~~   90 (115)
T 1yvw_A           64 VDVFYHCFVLLAEKNIALEDVMREVKE   90 (115)
T ss_dssp             HHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            345677777777764444455555544


No 80 
>2a7w_A PRA-PH, phosphoribosyl-ATP pyrophosphatase; structural genomics, PSI, protein structure initiative; 2.80A {Chromobacterium violaceum} SCOP: a.204.1.4
Probab=21.91  E-value=94  Score=23.25  Aligned_cols=28  Identities=7%  Similarity=-0.016  Sum_probs=16.9

Q ss_pred             HHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 037522          317 SVAMSWFFWLVSQNPRVEDKIATEICTV  344 (541)
Q Consensus       317 ~~~l~~~l~~L~~~P~~~~~lr~Ei~~~  344 (541)
                      +-++.+++..|...---.+.+.+|+.+=
T Consensus        65 ADLlYHllVlL~~~gv~l~dV~~eL~~R   92 (116)
T 2a7w_A           65 ADLWFHTMVLLTYHGLRPEDVVMELHRR   92 (116)
T ss_dssp             HHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence            3456677777777644455555665543


No 81 
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=21.70  E-value=1.3e+02  Score=18.03  Aligned_cols=13  Identities=15%  Similarity=0.350  Sum_probs=8.8

Q ss_pred             HHHHHHHHHHHHH
Q 037522          332 RVEDKIATEICTV  344 (541)
Q Consensus       332 ~~~~~lr~Ei~~~  344 (541)
                      ++.+.+|.|+.++
T Consensus        15 EIL~E~RkElqK~   27 (45)
T 1use_A           15 ELLEEVKKELQKV   27 (45)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            5666777777665


Done!