Query 037526
Match_columns 200
No_of_seqs 107 out of 632
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 13:09:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037526.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037526hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF01419 Jacalin: Jacalin-like 100.0 2.2E-31 4.7E-36 207.1 15.0 128 24-166 1-130 (130)
2 PLN02193 nitrile-specifier pro 100.0 1.1E-29 2.3E-34 235.0 16.4 152 14-179 3-156 (470)
3 KOG4525 Jacalin-like lectin do 99.1 1.2E-10 2.6E-15 106.6 7.3 126 13-164 482-613 (614)
4 PF01419 Jacalin: Jacalin-like 94.2 0.6 1.3E-05 35.7 9.3 82 15-120 39-127 (130)
5 KOG4525 Jacalin-like lectin do 84.9 1.5 3.3E-05 41.3 4.8 72 92-171 503-574 (614)
6 PRK13839 conjugal transfer pro 44.2 44 0.00095 29.6 4.8 13 87-100 82-94 (277)
7 TIGR02781 VirB9 P-type conjuga 35.2 62 0.0013 27.7 4.3 38 87-127 53-104 (243)
8 PLN02193 nitrile-specifier pro 34.0 3.9E+02 0.0085 24.8 9.8 67 92-165 20-100 (470)
9 PRK13885 conjugal transfer pro 28.4 1.2E+02 0.0026 27.1 5.1 12 115-126 140-151 (299)
10 cd00220 VMO-I Vitelline membra 25.7 3.8E+02 0.0082 22.0 7.4 74 92-167 22-117 (177)
11 PF05570 DUF765: Circovirus pr 24.0 34 0.00074 19.6 0.5 13 183-195 1-13 (29)
12 PRK06764 hypothetical protein; 23.0 1.9E+02 0.0041 21.5 4.3 19 85-103 76-94 (105)
No 1
>PF01419 Jacalin: Jacalin-like lectin domain; InterPro: IPR001229 This entry represents a mannose-binding lectin domain with a beta-prism fold consisting of three 4-stranded beta-sheets, with an internal pseudo 3-fold symmetry. Some lectins in this group stimulate distinct T- and B- cell functions, such as Jacalin, which binds to the T-antigen and acts as an agglutinin. This domain is found in 1 to 6 copies in lectins. The domain is also found in the salt-stress induced protein from rice and an animal prostatic spermine-binding protein. Proteins containing this domain include: Jacalin, a tetrameric plant seed lectin and agglutinin from Artocarpus heterophyllus (jackfruit), which is specific for galactose []. Artocarpin, a tetrameric plant seed lectin from A. heterophyllus []. Lectin MPA, a tetrameric plant seed lectin and agglutinin from Maclura pomifera (Osage orange), []. Heltuba lectin, a plant seed lectin and agglutinin from Helianthus tuberosus (Jerusalem artichoke) []. Agglutinin from Calystegia sepium (Hedge bindweed) []. Griffithsin, an anti-viral lectin from red algae (Griffithsia species) []. ; PDB: 2GUE_B 2HYR_A 2GTY_B 2HYQ_B 3LKY_A 2GUC_B 2GUD_A 2NUO_B 2NU5_B 3LL2_A ....
Probab=99.97 E-value=2.2e-31 Score=207.10 Aligned_cols=128 Identities=46% Similarity=0.859 Sum_probs=113.1
Q ss_pred CcccccCCCCceEEEEEEeC-CcEeEEEEEEecCCceEEecccCCCCCcccceeeccCCcceeceEecCCCceEEEEEEE
Q 037526 24 GTSWDDGIYHGVREITLAYD-RCIDSIRVVYDKKGNPVTAEKHGGVGGNRTAEICSIPTLLSFPIKLRFPEEFLISVSGH 102 (200)
Q Consensus 24 G~~fdd~~~~~V~~I~V~~g-~~Id~Iqf~Y~~~G~~~~~~~hG~~gg~~~~e~~~~~~~~~~~~~L~~p~EyIt~IsG~ 102 (200)
|..|||+.+..|++|.|+++ ..|++|||.|.+++..++...||..++....| |.|++|+|||++|+|+
T Consensus 1 g~~~d~g~~~~v~~i~v~~~~~~I~~Iq~~Y~~~~g~~~~~~~G~~~g~~~~~-----------~~l~~~~E~It~isG~ 69 (130)
T PF01419_consen 1 GDSWDDGGHDGVKKIVVIYGGDGIDGIQFTYDDGGGQVWGQQHGGNGGGSTKE-----------FELDDPDEYITSISGT 69 (130)
T ss_dssp SEEEEEECSSEEEEEEEEEESSSEEEEEEEEEETTEEEEEEEEECSSSTEEEE-----------EEEETTTS-EEEEEEE
T ss_pred CCcccCCCCCCCEEEEEEECCCEEEEEEEEEECCCceEEeeccCcccccCccc-----------eEECCCccEEEEEEEE
Confidence 67899999999999999987 79999999998765667889999988744556 8998679999999999
Q ss_pred EeeeecCCCCeEEEEEEEeCCCceeecccCCCCeEEEec-CCCEEEEEEEecCCcccEEEEEEEe
Q 037526 103 YCPVVYGGSPVIRSLTFKSNKRTFGPFGVEEGTPFTFSM-DGGLVVGFKGRSGWYVDAIGFYLSK 166 (200)
Q Consensus 103 ~g~~~~~~~~~I~sL~F~TNk~t~gpfG~~~G~~F~~~~-~g~~IvGF~GrsG~~LdsIGvy~~p 166 (200)
++. ...+|++|+|+||++++.|+|...|++|++++ ++++|||||||++++||+|||||+|
T Consensus 70 ~~~----~~~~I~sL~F~Tnkg~~~~~gg~~g~~F~~~~~~~~~ivGF~G~~g~~ld~iG~y~~p 130 (130)
T PF01419_consen 70 YGK----GHDYITSLTFTTNKGRYSPFGGSGGTKFSLPVPEGGQIVGFFGRSGDYLDSIGVYFTP 130 (130)
T ss_dssp EEE----TEEEEEEEEEEESSSEEEEEECSCSEEEEEEESESEEEEEEEEEESSSEEEEEEEEEE
T ss_pred EEc----CccEEEEEEEEecCCcccCcccccCCEEEEeecCCCEEEEEEEEcCCeEEEEEEEEeC
Confidence 985 34689999999999988888888889999887 6889999999999999999999998
No 2
>PLN02193 nitrile-specifier protein
Probab=99.97 E-value=1.1e-29 Score=235.05 Aligned_cols=152 Identities=29% Similarity=0.479 Sum_probs=131.9
Q ss_pred EEecceeCCCCcccccCCCCceEEEEEEeC-CcEeEEEEEEecCCceEEecccCCCCCcccceeeccCCcceeceEecCC
Q 037526 14 IVIGPWGGNGGTSWDDGIYHGVREITLAYD-RCIDSIRVVYDKKGNPVTAEKHGGVGGNRTAEICSIPTLLSFPIKLRFP 92 (200)
Q Consensus 14 ~k~gp~GG~gG~~fdd~~~~~V~~I~V~~g-~~Id~Iqf~Y~~~G~~~~~~~hG~~gg~~~~e~~~~~~~~~~~~~L~~p 92 (200)
.|++++||++|.+|||+.+++|++|.|.++ ..|++|+|.|+++++++.+..||........| |+|+ |
T Consensus 3 ~~~~~~gg~~g~~wddg~~~~v~~i~~~~~~~~i~~~~~~y~~~~~~~~~~~~g~~~~~~~~~-----------~~~~-~ 70 (470)
T PLN02193 3 QKLEAKGGETGDVWDDGVYDNVRKVYVGQGQYGIAFVKFEYVNGSQVVVGDEHGKKTELGVEE-----------FEID-A 70 (470)
T ss_pred eeeccccCCCCCcCcCCCcCCeEEEEEEeCCCEEEEEEEEEeCCCcEEEeccCCCCCCCCcEE-----------EEEC-C
Confidence 588999999999999999999999999998 59999999998888877778899977544456 9999 9
Q ss_pred CceEEEEEEEEeeeecCCCCeEEEEEEEeCC-CceeecccCCCCeEEEecCCCEEEEEEEecCCcccEEEEEEEecCChH
Q 037526 93 EEFLISVSGHYCPVVYGGSPVIRSLTFKSNK-RTFGPFGVEEGTPFTFSMDGGLVVGFKGRSGWYVDAIGFYLSKKQSSK 171 (200)
Q Consensus 93 ~EyIt~IsG~~g~~~~~~~~~I~sL~F~TNk-~t~gpfG~~~G~~F~~~~~g~~IvGF~GrsG~~LdsIGvy~~p~~~~~ 171 (200)
+||||+|+|+|+++.......|++|+|+||| |+++|||...|++|++ .+++||||+||+++.|++||+|+......+
T Consensus 71 ~e~~~~v~g~~~~~~~~~~~~i~~l~f~t~~~~~~~~~g~~~g~~f~~--~~~~ivgf~G~~~~~~~~ig~y~~~~~~~~ 148 (470)
T PLN02193 71 DDYIVYVEGYREKVNDMTSEMITFLSFKTYKGKTSHPIEKRPGVKFVL--QGGKIVGFHGRSTDVLHSLGAYISLPSTPK 148 (470)
T ss_pred CCcEEEEEEEecCcCCCCceeEEEEEEEeCCCccccccccCCCCEEEE--cCCeEEEEeccCCCcEEeeEEEEecCCChh
Confidence 9999999999998643345799999999999 7899999999999987 489999999999999999999998765555
Q ss_pred HHHHHHHH
Q 037526 172 LLQRVQKG 179 (200)
Q Consensus 172 ~~~~~~~~ 179 (200)
+.+.|.+.
T Consensus 149 ~~~~W~~~ 156 (470)
T PLN02193 149 LLGKWIKV 156 (470)
T ss_pred hhceEEEc
Confidence 55566544
No 3
>KOG4525 consensus Jacalin-like lectin domain-containing protein [General function prediction only]
Probab=99.12 E-value=1.2e-10 Score=106.62 Aligned_cols=126 Identities=19% Similarity=0.319 Sum_probs=97.8
Q ss_pred cEEeccee-CCCCcccccCCC--CceEEEEEEeCCcEeEEEEEEecCCceEEecccCCCCCcccceeeccCCcceeceEe
Q 037526 13 SIVIGPWG-GNGGTSWDDGIY--HGVREITLAYDRCIDSIRVVYDKKGNPVTAEKHGGVGGNRTAEICSIPTLLSFPIKL 89 (200)
Q Consensus 13 ~~k~gp~G-G~gG~~fdd~~~--~~V~~I~V~~g~~Id~Iqf~Y~~~G~~~~~~~hG~~gg~~~~e~~~~~~~~~~~~~L 89 (200)
+.++..|| |.+|++-....+ ..|+.|+|+++..+|+|.+.|.+ + +...|..++++++ |.|
T Consensus 482 Vq~s~~ygr~~~gkei~lia~~~r~it~ir~~cg~aldg~~~~yge--E---svl~g~~~~s~hd------------f~l 544 (614)
T KOG4525|consen 482 VQLSRDYGRGCNGKEIRLIAPSSRPITLIRLRCGQALDGLVAHYGE--E---SVLEGPYVGSPHD------------FQL 544 (614)
T ss_pred EEechhhcCCCCCceeeeeccccccceEEEEeccccccceEEEecc--c---ceeecccCCCccc------------eec
Confidence 44566688 457888775544 57999999999999999999942 1 3355666665542 777
Q ss_pred cCCCceEEEEEEEEeeeecCCCCeEEEEEEEeCC-CceeecccCCCCeEE-E-ecCCCEEEEEEEecCCcccEEEEEE
Q 037526 90 RFPEEFLISVSGHYCPVVYGGSPVIRSLTFKSNK-RTFGPFGVEEGTPFT-F-SMDGGLVVGFKGRSGWYVDAIGFYL 164 (200)
Q Consensus 90 ~~p~EyIt~IsG~~g~~~~~~~~~I~sL~F~TNk-~t~gpfG~~~G~~F~-~-~~~g~~IvGF~GrsG~~LdsIGvy~ 164 (200)
|+|-|..+.-+.+ .+|+.|++.|.. ++...||+.+|..|. + +.+|.+||||+|+-|.++|+||+++
T Consensus 545 --~gs~i~gf~~rCg-------awVd~isI~t~~G~t~~~~gn~~ggg~~s~~~pkg~~lvg~~g~lg~~mds~g~~~ 613 (614)
T KOG4525|consen 545 --PGSLIHGFAERCG-------AWVDGISILTTSGDTKRLSGNSSGGGLKSYLVPKGFQLVGFYGTLGPFMDSIGFFI 613 (614)
T ss_pred --chhhhhhHHhhhc-------cceeeEEEEecCCccccccccCCCCccceecCCCceEEEEEeccccchhhheeeec
Confidence 5998988887776 589999777754 788889999887664 3 4478899999999999999999986
No 4
>PF01419 Jacalin: Jacalin-like lectin domain; InterPro: IPR001229 This entry represents a mannose-binding lectin domain with a beta-prism fold consisting of three 4-stranded beta-sheets, with an internal pseudo 3-fold symmetry. Some lectins in this group stimulate distinct T- and B- cell functions, such as Jacalin, which binds to the T-antigen and acts as an agglutinin. This domain is found in 1 to 6 copies in lectins. The domain is also found in the salt-stress induced protein from rice and an animal prostatic spermine-binding protein. Proteins containing this domain include: Jacalin, a tetrameric plant seed lectin and agglutinin from Artocarpus heterophyllus (jackfruit), which is specific for galactose []. Artocarpin, a tetrameric plant seed lectin from A. heterophyllus []. Lectin MPA, a tetrameric plant seed lectin and agglutinin from Maclura pomifera (Osage orange), []. Heltuba lectin, a plant seed lectin and agglutinin from Helianthus tuberosus (Jerusalem artichoke) []. Agglutinin from Calystegia sepium (Hedge bindweed) []. Griffithsin, an anti-viral lectin from red algae (Griffithsia species) []. ; PDB: 2GUE_B 2HYR_A 2GTY_B 2HYQ_B 3LKY_A 2GUC_B 2GUD_A 2NUO_B 2NU5_B 3LL2_A ....
Probab=94.18 E-value=0.6 Score=35.74 Aligned_cols=82 Identities=21% Similarity=0.305 Sum_probs=53.3
Q ss_pred EecceeCCCC---cccccC-CCCceEEEEEEeC---CcEeEEEEEEecCCceEEecccCCCCCcccceeeccCCcceece
Q 037526 15 VIGPWGGNGG---TSWDDG-IYHGVREITLAYD---RCIDSIRVVYDKKGNPVTAEKHGGVGGNRTAEICSIPTLLSFPI 87 (200)
Q Consensus 15 k~gp~GG~gG---~~fdd~-~~~~V~~I~V~~g---~~Id~Iqf~Y~~~G~~~~~~~hG~~gg~~~~e~~~~~~~~~~~~ 87 (200)
....+|+.++ ..+... +.+.|++|..+.+ ..|++|+|.-. .|+. .+..| ..+. . |++
T Consensus 39 ~~~~~G~~~g~~~~~~~l~~~~E~It~isG~~~~~~~~I~sL~F~Tn-kg~~--~~~gg-~~g~---~---------F~~ 102 (130)
T PF01419_consen 39 WGQQHGGNGGGSTKEFELDDPDEYITSISGTYGKGHDYITSLTFTTN-KGRY--SPFGG-SGGT---K---------FSL 102 (130)
T ss_dssp EEEEEECSSSTEEEEEEEETTTS-EEEEEEEEEETEEEEEEEEEEES-SSEE--EEEEC-SCSE---E---------EEE
T ss_pred EeeccCcccccCccceEECCCccEEEEEEEEEEcCccEEEEEEEEec-CCcc--cCccc-ccCC---E---------EEE
Confidence 4445677766 334434 3588999999998 69999999864 3432 33333 4332 2 224
Q ss_pred EecCCCceEEEEEEEEeeeecCCCCeEEEEEEE
Q 037526 88 KLRFPEEFLISVSGHYCPVVYGGSPVIRSLTFK 120 (200)
Q Consensus 88 ~L~~p~EyIt~IsG~~g~~~~~~~~~I~sL~F~ 120 (200)
... +++.|..+.|+++ ..|++|.|.
T Consensus 103 ~~~-~~~~ivGF~G~~g-------~~ld~iG~y 127 (130)
T PF01419_consen 103 PVP-EGGQIVGFFGRSG-------DYLDSIGVY 127 (130)
T ss_dssp EES-ESEEEEEEEEEES-------SSEEEEEEE
T ss_pred eec-CCCEEEEEEEEcC-------CeEEEEEEE
Confidence 443 6888999998886 479999874
No 5
>KOG4525 consensus Jacalin-like lectin domain-containing protein [General function prediction only]
Probab=84.94 E-value=1.5 Score=41.29 Aligned_cols=72 Identities=19% Similarity=0.308 Sum_probs=50.6
Q ss_pred CCceEEEEEEEEeeeecCCCCeEEEEEEEeCCCceeecccCCCCeEEEecCCCEEEEEEEecCCcccEEEEEEEecCChH
Q 037526 92 PEEFLISVSGHYCPVVYGGSPVIRSLTFKSNKRTFGPFGVEEGTPFTFSMDGGLVVGFKGRSGWYVDAIGFYLSKKQSSK 171 (200)
Q Consensus 92 p~EyIt~IsG~~g~~~~~~~~~I~sL~F~TNk~t~gpfG~~~G~~F~~~~~g~~IvGF~GrsG~~LdsIGvy~~p~~~~~ 171 (200)
..--||.|+.+.| ..++.|.|.--. .+.-+|...|.+-.+++.+..|+||.=|+|.|+|+|.|....=.-++
T Consensus 503 ~~r~it~ir~~cg-------~aldg~~~~yge-Esvl~g~~~~s~hdf~l~gs~i~gf~~rCgawVd~isI~t~~G~t~~ 574 (614)
T KOG4525|consen 503 SSRPITLIRLRCG-------QALDGLVAHYGE-ESVLEGPYVGSPHDFQLPGSLIHGFAERCGAWVDGISILTTSGDTKR 574 (614)
T ss_pred ccccceEEEEecc-------ccccceEEEecc-cceeecccCCCccceecchhhhhhHHhhhccceeeEEEEecCCcccc
Confidence 4456888888877 367888877622 23446777665433444478999999999999999999886433333
No 6
>PRK13839 conjugal transfer protein TrbG; Provisional
Probab=44.23 E-value=44 Score=29.58 Aligned_cols=13 Identities=31% Similarity=0.340 Sum_probs=10.6
Q ss_pred eEecCCCceEEEEE
Q 037526 87 IKLRFPEEFLISVS 100 (200)
Q Consensus 87 ~~L~~p~EyIt~Is 100 (200)
|.|+ |+|-|..|.
T Consensus 82 I~L~-pgE~I~~va 94 (277)
T PRK13839 82 IELQ-GGEVVRDVL 94 (277)
T ss_pred EEEC-CCCEEEeec
Confidence 8887 999888774
No 7
>TIGR02781 VirB9 P-type conjugative transfer protein VirB9. The VirB9 protein is found in the vir locus of Agrobacterium Ti plasmids where it is involved in a type IV secretion system. VirB9 is a homolog of the F-type conjugative transfer system TraK protein (which is believed to be an outer membrane pore-forming secretin, TIGR02756) as well as the Ti system TrbG protein.
Probab=35.24 E-value=62 Score=27.74 Aligned_cols=38 Identities=18% Similarity=0.180 Sum_probs=22.2
Q ss_pred eEecCCCceEEEEEEEEeeee------c--------CCCCeEEEEEEEeCCCcee
Q 037526 87 IKLRFPEEFLISVSGHYCPVV------Y--------GGSPVIRSLTFKSNKRTFG 127 (200)
Q Consensus 87 ~~L~~p~EyIt~IsG~~g~~~------~--------~~~~~I~sL~F~TNk~t~g 127 (200)
|.|+ |+|-|..|.. |+.. . .....-+.|.+.||||+|.
T Consensus 53 I~f~-~gE~I~~v~~--GDt~~W~v~~~~n~i~IKP~~~~~~TNl~V~TnkR~Y~ 104 (243)
T TIGR02781 53 IEFA-DDETIKTVAV--GDSKAWEVTPNGNKLFIKPTEKDWKTNMTVVTNKRSYV 104 (243)
T ss_pred EEeC-CCCEEEEecc--cCCcceEEEcCCCEEEEEECCCCCCceEEEEECCeEEE
Confidence 7787 8888876643 2210 0 0111236789999988763
No 8
>PLN02193 nitrile-specifier protein
Probab=33.97 E-value=3.9e+02 Score=24.84 Aligned_cols=67 Identities=12% Similarity=0.021 Sum_probs=41.2
Q ss_pred CCceEEEEEEEEeeeecCCCCeEEEEEEEeCCCceee----cccCCC---CeEEEecCCCEEEEEEEecCC-------cc
Q 037526 92 PEEFLISVSGHYCPVVYGGSPVIRSLTFKSNKRTFGP----FGVEEG---TPFTFSMDGGLVVGFKGRSGW-------YV 157 (200)
Q Consensus 92 p~EyIt~IsG~~g~~~~~~~~~I~sL~F~TNk~t~gp----fG~~~G---~~F~~~~~g~~IvGF~GrsG~-------~L 157 (200)
.-+-|.+|...++. ..|++|+|.-.++.... .|...+ .+|++. .+..|....|..+. .|
T Consensus 20 ~~~~v~~i~~~~~~------~~i~~~~~~y~~~~~~~~~~~~g~~~~~~~~~~~~~-~~e~~~~v~g~~~~~~~~~~~~i 92 (470)
T PLN02193 20 VYDNVRKVYVGQGQ------YGIAFVKFEYVNGSQVVVGDEHGKKTELGVEEFEID-ADDYIVYVEGYREKVNDMTSEMI 92 (470)
T ss_pred CcCCeEEEEEEeCC------CEEEEEEEEEeCCCcEEEeccCCCCCCCCcEEEEEC-CCCcEEEEEEEecCcCCCCceeE
Confidence 34668899888863 48999999875532111 233322 357776 56667777666543 46
Q ss_pred cEEEEEEE
Q 037526 158 DAIGFYLS 165 (200)
Q Consensus 158 dsIGvy~~ 165 (200)
.+|-+...
T Consensus 93 ~~l~f~t~ 100 (470)
T PLN02193 93 TFLSFKTY 100 (470)
T ss_pred EEEEEEeC
Confidence 77766653
No 9
>PRK13885 conjugal transfer protein TrbG; Provisional
Probab=28.43 E-value=1.2e+02 Score=27.13 Aligned_cols=12 Identities=33% Similarity=0.692 Sum_probs=9.7
Q ss_pred EEEEEEeCCCce
Q 037526 115 RSLTFKSNKRTF 126 (200)
Q Consensus 115 ~sL~F~TNk~t~ 126 (200)
+.|.+.||+|+|
T Consensus 140 TNL~V~TnrRtY 151 (299)
T PRK13885 140 TSLVVTTDRRTY 151 (299)
T ss_pred ceEEEEECCcEE
Confidence 678888998875
No 10
>cd00220 VMO-I Vitelline membrane outer layer protein I (VMO-I) domain, VMO-I is one of the proteins found in the outer layer of the vitelline membrane of poultry eggs; VMO-I, lysozyme, and VMO-II are tightly bound to ovomucin; this complex forms the backbone of the outer layer; VMO-I has three distinct internal repeats; all three repeats are used to define the domain here; VMO-I has recently been shown to synthesize N-acetylchito-oligosaccharides from N-acetylglucosamine; may be a carbohydrate-binding protein; member of the beta-prism-fold family
Probab=25.68 E-value=3.8e+02 Score=22.00 Aligned_cols=74 Identities=18% Similarity=0.275 Sum_probs=48.0
Q ss_pred CCceEEEEEEEEeeee-cCCCCeEEEEEEEeCCC-------------ceeecccCCCCeEEEecCCCEEEEEEEecC---
Q 037526 92 PEEFLISVSGHYCPVV-YGGSPVIRSLTFKSNKR-------------TFGPFGVEEGTPFTFSMDGGLVVGFKGRSG--- 154 (200)
Q Consensus 92 p~EyIt~IsG~~g~~~-~~~~~~I~sL~F~TNk~-------------t~gpfG~~~G~~F~~~~~g~~IvGF~GrsG--- 154 (200)
+++|+..++.++-... ..+...++.|.|.=+.. ..+++|.+....| .| .+..|+||.=|.-
T Consensus 22 ~G~~v~Gf~lk~E~~q~~~Ddtgln~i~l~C~~~~~~~~~~~~~i~s~~~~wG~W~~~~~-CP-~g~~v~Gf~lr~e~~q 99 (177)
T cd00220 22 SGSFANGFQLKYETPQGFSDDTGLNAIALFCNPPDGKTSNSENEIISGEGPWGSWREIQW-CP-NGTVIVGFALRSEPEQ 99 (177)
T ss_pred CCCEEEEEEEEEecCcCCCCccceeeeeeeccCCCCCccccccEEeeCCCCCCCCCCceE-CC-CCCeEEEEEEEecCCc
Confidence 5789999998885321 12457788888864221 2245666665555 34 4678999987742
Q ss_pred ---C--cccEEEEEEEec
Q 037526 155 ---W--YVDAIGFYLSKK 167 (200)
Q Consensus 155 ---~--~LdsIGvy~~p~ 167 (200)
+ -|+.|-+|....
T Consensus 100 ~~~DDta~nni~~~C~~p 117 (177)
T cd00220 100 GKGDDTGANNFAAYCGRP 117 (177)
T ss_pred CCCCccceeeeeEEeCCC
Confidence 2 489999999643
No 11
>PF05570 DUF765: Circovirus protein of unknown function (DUF765); InterPro: IPR008484 This family consists of several short (27-30aa) porcine and bovine circovirus ORF6 proteins of unknown function.
Probab=23.96 E-value=34 Score=19.63 Aligned_cols=13 Identities=46% Similarity=0.544 Sum_probs=9.9
Q ss_pred ccccccCCCCCcC
Q 037526 183 LASTTAKSSATKD 195 (200)
Q Consensus 183 ~~~~~~~~~~~~~ 195 (200)
+||.+|+||+..|
T Consensus 1 masstpaspapsd 13 (29)
T PF05570_consen 1 MASSTPASPAPSD 13 (29)
T ss_pred CCcCCCCCCCcHH
Confidence 4678888888765
No 12
>PRK06764 hypothetical protein; Provisional
Probab=23.01 E-value=1.9e+02 Score=21.48 Aligned_cols=19 Identities=26% Similarity=0.667 Sum_probs=15.5
Q ss_pred eceEecCCCceEEEEEEEE
Q 037526 85 FPIKLRFPEEFLISVSGHY 103 (200)
Q Consensus 85 ~~~~L~~p~EyIt~IsG~~ 103 (200)
+++.|+-|++|+.+|+|..
T Consensus 76 yti~f~kpg~yvirvngci 94 (105)
T PRK06764 76 YTIRFSKPGKYVIRVNGCI 94 (105)
T ss_pred eEEEecCCccEEEEEccEE
Confidence 4577777999999999864
Done!