BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037528
(158 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 306 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 365
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 366 FPEFLTM 372
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQLDIDGSGRLD 74
TD E + + F+ DKDGN +S E M+ L + + + DIDG G+++
Sbjct: 380 TDSEEEI-REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 438
Query: 75 FKEVLTL 81
++E + +
Sbjct: 439 YEEFVQM 445
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 307 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 366
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 367 FPEFLTM 373
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQLDIDGSGRLD 74
TD E + + F+ DKDGN +S E M+ L + + + DIDG G+++
Sbjct: 381 TDSEEEI-REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 439
Query: 75 FKEVLTL 81
++E + +
Sbjct: 440 YEEFVQM 446
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 306 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 365
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 366 FPEFLTM 372
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 9 LAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQLDI 67
+A + TD E + + F+ DKDGN +S E M+ L + + + DI
Sbjct: 373 MARWMKDTDSEEEI-REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 431
Query: 68 DGSGRLDFKEVLTL 81
DG G+++++E + +
Sbjct: 432 DGDGQVNYEEFVQM 445
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG G +D
Sbjct: 305 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 364
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 365 FPEFLTM 371
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQLDIDGSGRLD 74
TD E + + F+ DKDGN +S E M+ L + + + DIDG G+++
Sbjct: 379 TDSEEEI-REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 437
Query: 75 FKEVLTL 81
++E + +
Sbjct: 438 YEEFVQM 444
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG G +D
Sbjct: 305 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 364
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 365 FPEFLTM 371
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQLDIDGSGRLD 74
TD E + + F+ DKDGN +S E M+ L + + + DIDG G+++
Sbjct: 379 TDSEEEI-REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 437
Query: 75 FKEVLTL 81
++E + +
Sbjct: 438 YEEFVQM 444
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 306 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 365
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 366 FPEFLTM 372
Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQLDIDGSGRLD 74
TD E + + F+ DKDGN +S E M+ L + + + DIDG G+++
Sbjct: 380 TDSEEEI-REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 438
Query: 75 FKEVLTL 81
++E + +
Sbjct: 439 YEEFVQM 445
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 306 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 365
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 366 FPEFLTM 372
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQLDIDGSGRLD 74
TD E + + F+ DKDGN +S E M+ L + + + DIDG G+++
Sbjct: 380 TDSEEEI-REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 438
Query: 75 FKEVLTL 81
++E + +
Sbjct: 439 YEEFVQM 445
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 269 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 328
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 329 FPEFLTM 335
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 331 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 387
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E + +
Sbjct: 388 MIREADIDGDGQVNYEEFVQM 408
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 272 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 331
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 332 FPEFLTM 338
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 334 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 390
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E + +
Sbjct: 391 MIREADIDGDGQVNYEEFVQM 411
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 272 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 331
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 332 FPEFLTM 338
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 334 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 390
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E + +
Sbjct: 391 MIREADIDGDGQVNYEEFVQM 411
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG G +D
Sbjct: 306 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 365
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 366 FPEFLTM 372
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQLDIDGSGRLD 74
TD E + + F+ DKDGN +S E M+ L + + + DIDG G+++
Sbjct: 380 TDSEEEI-REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 438
Query: 75 FKEVLTL 81
++E + +
Sbjct: 439 YEEFVQM 445
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG G +D
Sbjct: 305 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 364
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 365 FPEFLTM 371
Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQLDIDGSGRLD 74
TD E + + F+ DKDGN +S E M+ L + + + DIDG G+++
Sbjct: 379 TDSEEEI-REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 437
Query: 75 FKEVLTL 81
++E + +
Sbjct: 438 YEEFVQM 444
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 65 FPEFLTM 71
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 66 FPEFLTM 72
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 75 FKEVLTLY 82
F E LT+
Sbjct: 65 FPEFLTMM 72
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 75 FKEVLTLY 82
F E LT+
Sbjct: 65 FPEFLTMM 72
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 5 TEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTID 64
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 65 FPEFLTM 71
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 75 FKEVLTLY 82
F E LT+
Sbjct: 65 FPEFLTMM 72
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 75 FKEVLTLY 82
F E LT+
Sbjct: 65 FPEFLTMM 72
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
Length = 146
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 14 SGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGR 72
+ T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G
Sbjct: 1 AATEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 60
Query: 73 LDFKEVLTL 81
+DF E LT+
Sbjct: 61 IDFPEFLTM 69
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQLDIDGSGRLD 74
TD E + + F+ DKDGN +S E M+ L + + + DIDG G+++
Sbjct: 77 TDSEEEI-REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 135
Query: 75 FKEVLTL 81
++E + +
Sbjct: 136 YEEFVQM 142
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 75 FKEVLTLY 82
F E LT+
Sbjct: 65 FPEFLTMM 72
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG G +D
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 64
Query: 75 FKEVLTLY 82
F E LT+
Sbjct: 65 FPEFLTMM 72
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
TDE+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 2 TDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 61
Query: 75 FKEVLTL 81
F E L L
Sbjct: 62 FPEFLNL 68
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQLDIDGSGRLD 74
TD E L + F+ DKDGN +S E M+ L + + + D+DG G+++
Sbjct: 76 TDSEEEL-KEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVN 134
Query: 75 FKE 77
++E
Sbjct: 135 YEE 137
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In
The Crystal Structure
Length = 142
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 61 FPEFLTM 67
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20
Peptide Complex
Length = 148
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
TDE+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 5 TDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 75 FKEVLTL 81
F E L L
Sbjct: 65 FPEFLNL 71
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQLDIDGSGRLD 74
TD E +L + F+ DKDGN +S E M+ L + + + D+DG G+++
Sbjct: 79 TDSEEKL-KEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVN 137
Query: 75 FKE 77
++E
Sbjct: 138 YEE 140
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
TDE+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 5 TDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 75 FKEVLTL 81
F E L L
Sbjct: 65 FPEFLNL 71
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQLDIDGSGRLD 74
TD E L + F+ DKDGN +S E M+ L + + + D+DG G+++
Sbjct: 79 TDSEEEL-KEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVN 137
Query: 75 FKE 77
++E
Sbjct: 138 YEE 140
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 10 AYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDID 68
A + T+E+ F + F DKDG+ ++ +E M SL + +D N++D D
Sbjct: 3 AMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 62
Query: 69 GSGRLDFKEVLTL 81
G+G +DF E LT+
Sbjct: 63 GNGTIDFPEFLTM 75
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 71 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 127
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E + +
Sbjct: 128 MIREADIDGDGQVNYEEFVQM 148
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 65 FPEFLTM 71
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
Length = 179
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 66 FPEFLTM 72
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 68 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 124
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E + +
Sbjct: 125 MIREADIDGDGQVNYEEFVQM 145
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 66 FPEFLTM 72
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 68 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 124
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E + +
Sbjct: 125 MIREADIDGDGQVNYEEFVQM 145
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 65 FPEFLTM 71
Score = 26.6 bits (57), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 67 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ +IDG G+++++E + +
Sbjct: 124 MIREANIDGDGQVNYEEFVQM 144
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 2 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 61
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 62 FPEFLTM 68
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 64 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 120
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E + +
Sbjct: 121 MIREADIDGDGQVNYEEFVQM 141
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 75 FKEVLTLYY--ILKSRRPICGRCRIF 98
F E LT+ + S I R+F
Sbjct: 65 FPEFLTMMARKMKDSEEEIREAFRVF 90
Score = 29.3 bits (64), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 25 QFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQLDIDGSGRLDFKEVLTL 81
+ F+ DKDGN +S E M+ L + + + DIDG G+++++E +T+
Sbjct: 85 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 142
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 23 FNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRDFFNQLDIDGSG 71
+D DGN + + EF M+ + D R+ F D DG+G
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLTMMARKMKDSEEEIREAFRVFDKDGNG 96
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
TDE+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 5 TDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 75 FKEVLTLY 82
F E L L
Sbjct: 65 FPEFLNLM 72
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 7 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 66
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 67 FPEFLTM 73
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 69 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 125
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E + +
Sbjct: 126 MIREADIDGDGQVNYEEFVQM 146
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 63 FPEFLTM 69
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 65 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E + +
Sbjct: 122 MIREADIDGDGQVNYEEFVQM 142
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 66 FPEFLTM 72
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 68 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDE 124
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E + +
Sbjct: 125 MIREADIDGDGQVNYEEFVQM 145
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 65 FPEFLTM 71
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 67 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDE 123
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E + +
Sbjct: 124 MIREADIDGDGQVNYEEFVQM 144
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 65 FPEFLTM 71
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 67 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E + +
Sbjct: 124 MIREADIDGDGQVNYEEFVQM 144
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 66 FPEFLTM 72
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 68 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 124
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E + +
Sbjct: 125 MIREADIDGDGQVNYEEFVQM 145
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 61 FPEFLTM 67
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 63 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 119
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E + +
Sbjct: 120 MIREADIDGDGQVNYEEFVQM 140
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG G +D
Sbjct: 297 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 356
Query: 75 FKEVLTL 81
F E L +
Sbjct: 357 FPEFLIM 363
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 7 VALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQL 65
+ +A TD E + + F+ DKDGN +S E M+ L + + +
Sbjct: 362 IMMARKMKDTDSEEEI-REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 420
Query: 66 DIDGSGRLDFKEVLTL 81
DIDG G+++++E + +
Sbjct: 421 DIDGDGQVNYEEFVQM 436
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE
KINASE Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal
Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal
Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A
Calcineurin Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A
Calcineurin Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium
Channel Splice Variant Complexed With
Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium
Channel Splice Variant Complexed With
Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel
Splice Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel
Splice Variant And Ebio-1
Length = 149
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 66 FPEFLTM 72
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 68 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 124
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E + +
Sbjct: 125 MIREADIDGDGQVNYEEFVQM 145
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX
COMPLEX
Length = 144
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 63 FPEFLTM 69
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 65 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E + +
Sbjct: 122 MIREADIDGDGQVNYEEFVQM 142
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 66 FPEFLTM 72
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L +
Sbjct: 68 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQ 124
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E + +
Sbjct: 125 MIREADIDGDGQVNYEEFVQM 145
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor
State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant
Crystal Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1)
Post-rigor State
Length = 149
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 66 FPEFLTM 72
Score = 30.4 bits (67), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 68 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E +T+
Sbjct: 125 MIREADIDGDGQVNYEEFVTM 145
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 11 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 70
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 71 FPEFLTM 77
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 73 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 129
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E + +
Sbjct: 130 MIREADIDGDGQVNYEEFVQM 150
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd),
1:2 Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A
Bis-Indol Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled
(Sail) Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From
Dap Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The
Basis Of Diversity In Molecular Recognition, 30
Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA
RECEPTOR NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel
(Cav2.1) Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel
(Cav2.1) Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide
From Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1
In Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE
BINDING MODE
Length = 148
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 65 FPEFLTM 71
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 67 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E + +
Sbjct: 124 MIREADIDGDGQVNYEEFVQM 144
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 65 FPEFLTM 71
Score = 30.4 bits (67), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 67 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 123
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E +T+
Sbjct: 124 MIREADIDGDGQVNYEEFVTM 144
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans :
Calmodulin
Length = 149
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 66 FPEFLTM 72
Score = 30.4 bits (67), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 68 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E +T+
Sbjct: 125 MIREADIDGDGQVNYEEFVTM 145
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide
Complex By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide
Complex By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 65 FPEFLTM 71
Score = 30.4 bits (67), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 67 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 123
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E +T+
Sbjct: 124 MIREADIDGDGQVNYEEFVTM 144
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor
State ( Crystal Form 2)
Length = 149
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 66 FPEFLTM 72
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 68 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E +T+
Sbjct: 125 MIRESDIDGDGQVNYEEFVTM 145
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional
Myosin V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional
Myosin V
Length = 145
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 4 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 63
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 64 FPEFLTM 70
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 66 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 122
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E + +
Sbjct: 123 MIREADIDGDGQVNYEEFVQM 143
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG G +D
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 64
Query: 75 FKEVLTL 81
F E LT+
Sbjct: 65 FPEFLTM 71
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 2 EALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRD 60
E L +A ++ ++EE R + F+ DKDGN +S E M+ L + +
Sbjct: 67 EFLTMMARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 61 FFNQLDIDGSGRLDFKEVLTL 81
+ DIDG G+++++E + +
Sbjct: 124 MIREADIDGDGQVNYEEFVQM 144
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 5 TEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 75 FKEVLTL 81
F E L+L
Sbjct: 65 FPEFLSL 71
Score = 26.6 bits (57), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 17 DEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQLDIDGSGRLDF 75
D E L + F+ D+DGN +S E M+ L + + + DIDG G +++
Sbjct: 80 DSEEELI-EAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINY 138
Query: 76 KE 77
+E
Sbjct: 139 EE 140
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 5 TEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 75 FKEVLTL 81
F E L+L
Sbjct: 65 FPEFLSL 71
Score = 26.6 bits (57), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 17 DEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQLDIDGSGRLDF 75
D E L + F+ D+DGN +S E M+ L + + + DIDG G +++
Sbjct: 80 DSEEELI-EAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINY 138
Query: 76 KE 77
+E
Sbjct: 139 EE 140
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
TD++ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 6 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 75 FKEVLTL 81
F E L L
Sbjct: 66 FPEFLNL 72
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal
Domain Of Yeast Calmodulin
Length = 77
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKD N +S E + M SL D N++D+DG+ +++
Sbjct: 5 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIE 64
Query: 75 FKEVLTL 81
F E L L
Sbjct: 65 FSEFLAL 71
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ ++ M SL + +D N++ DG+G +D
Sbjct: 306 TEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTID 365
Query: 75 FKEVLTL 81
F + LT+
Sbjct: 366 FPQFLTM 372
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKD N +S E + M SL D N++D+DG+ +++
Sbjct: 5 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIE 64
Query: 75 FKEVLTLY 82
F E L L
Sbjct: 65 FSEFLALM 72
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKD N +S E + M SL D N++D+DG+ +++
Sbjct: 6 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIE 65
Query: 75 FKEVLTLY 82
F E L L
Sbjct: 66 FSEFLALM 73
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKD N +S E + M SL D N++D+DG+ +++
Sbjct: 5 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIE 64
Query: 75 FKEVLTLY 82
F E L L
Sbjct: 65 FSEFLALM 72
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 20 RRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAH---DENMRTRDFFNQLDIDGSGRLDF 75
+L F+S+D DGN + EF+ F S+Q D+ + + + +D+DG G+L
Sbjct: 35 EQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTK 94
Query: 76 KEVLTLY 82
+EV + +
Sbjct: 95 EEVTSFF 101
Score = 30.4 bits (67), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 26 FFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRDF-FNQLDIDGSGRLDFKEVLTLY 82
F+ +D +G+ VSY E F+S + +N + F +D DG+G +D E Y
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 20 RRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAH---DENMRTRDFFNQLDIDGSGRLDF 75
+L F+S+D DGN + EF+ F S+Q D+ + + + +D+DG G+L
Sbjct: 35 EQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTK 94
Query: 76 KEVLTLY 82
+EV + +
Sbjct: 95 EEVTSFF 101
Score = 30.4 bits (67), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 26 FFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRDF-FNQLDIDGSGRLDFKEVLTLY 82
F+ +D +G+ VSY E F+S + +N + F +D DG+G +D E Y
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E SL + +D N++D DG+G +D
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTID 64
Query: 75 FKEVLT 80
F E LT
Sbjct: 65 FPEFLT 70
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 14/69 (20%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREF-------SDFMSLQAHDENMRTRDFFNQLDID 68
TD E + + F+ DKDGN +S E + ++ + DE +R + DID
Sbjct: 79 TDSEEEI-REAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIR------EADID 131
Query: 69 GSGRLDFKE 77
G G+++++E
Sbjct: 132 GDGQVNYEE 140
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
Length = 149
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E SL + +D N++D DG+G +D
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTID 65
Query: 75 FKEVLT 80
F E LT
Sbjct: 66 FPEFLT 71
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ RE M SL + RD +++D DG+G +D
Sbjct: 5 TEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVD 64
Query: 75 FKEVLTL 81
F E L +
Sbjct: 65 FPEFLGM 71
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+++ F + F DKDG+ ++ +E M SL + +D N++D DG+G +D
Sbjct: 6 TEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 75 FKEVLTL 81
F E L L
Sbjct: 66 FPEFLNL 72
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKD + +S E + M SL D N++D+DG+ ++
Sbjct: 6 TEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIE 65
Query: 75 FKEVLTLYYILKSRRPIC 92
F E L L SR+ C
Sbjct: 66 FSEFLALM----SRQLKC 79
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F + F DKDG+ ++ +E SL + +D N++D DG+G ++
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTIN 64
Query: 75 FKEVLT 80
F E LT
Sbjct: 65 FPEFLT 70
Score = 26.9 bits (58), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 14/69 (20%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREF-------SDFMSLQAHDENMRTRDFFNQLDID 68
TD E + + F+ DKDGN +S E + ++ + DE +R + DID
Sbjct: 79 TDSEEEI-REAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIR------EADID 131
Query: 69 GSGRLDFKE 77
G G+++++E
Sbjct: 132 GDGQVNYEE 140
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 7/122 (5%)
Query: 23 FNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRD-FFNQLDIDGSGRLDFKEVLTL 81
F F D DG +S +E M + + D ++D DGSG +DF+E L +
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
Query: 82 YYILKSRRPICGRCRIFITNEYFACMRCFETGSAAYSICLECFGDKGSLNHNHVRSYFVD 141
+ + + G+ + N C R F+ + + I +E G+ HV ++
Sbjct: 82 -MVRQMKEDAKGKSEEELAN----CFRIFDKNADGF-IDIEELGEILRATGEHVTEEDIE 135
Query: 142 NF 143
+
Sbjct: 136 DL 137
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 7/122 (5%)
Query: 23 FNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRD-FFNQLDIDGSGRLDFKEVLTL 81
F F D DG +S +E M + + D ++D DGSG +DF+E L +
Sbjct: 19 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 78
Query: 82 YYILKSRRPICGRCRIFITNEYFACMRCFETGSAAYSICLECFGDKGSLNHNHVRSYFVD 141
+ + + G+ + N C R F+ + + I +E G+ HV ++
Sbjct: 79 -MVRQMKEDAKGKSEEELAN----CFRIFDKNADGF-IDIEELGEILRATGEHVTEEDIE 132
Query: 142 NF 143
+
Sbjct: 133 DL 134
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 20 RRLFNQFFQSMDKDGNRRVSYREFSDFMSLQAH----DENMRTRDFFNQLDIDGSGRLDF 75
+L F+++D DGN + EF+ F + DE + + + +D DG G+L
Sbjct: 35 EQLLQLIFKAIDIDGNGEIDLAEFTKFAAAVKEQDLSDEKVGLKILYKLMDADGDGKLTK 94
Query: 76 KEVLTLY 82
+EV T +
Sbjct: 95 EEVTTFF 101
Score = 34.3 bits (77), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 26 FFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRDF-FNQLDIDGSGRLDFKE 77
F+ +D +G+ VSY E F+S + +N + F +DIDG+G +D E
Sbjct: 5 LFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAE 57
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
++E + F+ D+DGN +S +E M SL + +LD+DG G++D
Sbjct: 31 PEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVD 90
Query: 75 FKEVLTL 81
F+E +TL
Sbjct: 91 FEEFVTL 97
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Query: 23 FNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRD-FFNQLDIDGSGRLDFKEVLTL 81
F F D DG +S +E M + + D ++D DGSG +DF+E L +
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
Query: 82 YYILKSRRPICGRCRIFITNEYFACMRCFETGSAAYSICLECFGDKGSLNHNHVRSYFVD 141
+ + + G+ E C R F+ + + I +E G+ HV ++
Sbjct: 82 -MVRQMKEDAKGKSE----EELADCFRIFDKNADGF-IDIEELGEILRATGEHVTEEDIE 135
Query: 142 NF 143
+
Sbjct: 136 DL 137
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 7/114 (6%)
Query: 23 FNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRD-FFNQLDIDGSGRLDFKEVLTL 81
F F D DG +S +E M + + D ++D DGSG +DF+E L +
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
Query: 82 YYILKSRRPICGRCRIFITNEYFACMRCFETGSAAYSICLECFGDKGSLNHNHV 135
+ + + G+ + N C R F+ + + I +E G+ HV
Sbjct: 82 -MVRQMKEDAKGKSEEELAN----CFRIFDKNADGF-IDIEELGEILRATGEHV 129
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Query: 23 FNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRD-FFNQLDIDGSGRLDFKEVLTL 81
F F D DG +S +E M + + D ++D DGSG +DF+E L +
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
Query: 82 YYILKSRRPICGRCRIFITNEYFACMRCFETGSAAYSICLECFGDKGSLNHNHVRSYFVD 141
+ + + G+ E C R F+ + + I +E G+ HV ++
Sbjct: 82 -MVRQMKEDAKGKSE----EELEDCFRIFDKNADGF-IDIEELGEILRATGEHVTEEDIE 135
Query: 142 NF 143
+
Sbjct: 136 DL 137
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+++ + F D DG+ + +E M +L + + +++D DGSG +D
Sbjct: 25 TEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTID 84
Query: 75 FKEVLTL 81
F+E LT+
Sbjct: 85 FEEFLTM 91
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 23 FNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRD-FFNQLDIDGSGRLDFKEVLTL 81
F F D DG +S +E M + D ++D DGSG +DF+E L +
Sbjct: 19 FKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVM 78
Query: 82 YYILKSRRPICGRCRIFITNEYFACMRCFETGSAAY 117
+ + + G+ E C R F+ + Y
Sbjct: 79 -MVRQMKEDAKGKSE----EELAECFRIFDRNADGY 109
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 34.3 bits (77), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 23 FNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLDFKEVLTL 81
F + F DKDG+ ++ E + + SL + +D +++D DG+G ++F E L+L
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 34.3 bits (77), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 23 FNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLDFKEVLTL 81
F + F DKDG+ ++ E + + SL + +D +++D DG+G ++F E L+L
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
Query: 82 Y 82
Sbjct: 72 M 72
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+++ + F D DG+ + +E M +L + + +++D DGSG +D
Sbjct: 23 TEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTID 82
Query: 75 FKEVLTLYYIL----KSRRPICGRCRIF 98
F+E LT+ SR I R+F
Sbjct: 83 FEEFLTMMTAKMGERDSREEILKAFRLF 110
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 33.9 bits (76), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 23 FNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRD-FFNQLDIDGSGRLDFKEVLTL 81
F F D DG +S +E M + + D ++D DGSG +DF+E L +
Sbjct: 11 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 70
Query: 82 YY 83
Sbjct: 71 MV 72
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 33.9 bits (76), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRDFFNQLDIDGSGRLDF 75
DE +RL + F+ +D D + +S EF LQ + R D F D DG+G +DF
Sbjct: 16 ADEIKRL-GKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIF---DTDGNGEVDF 71
Query: 76 KEVL 79
KE +
Sbjct: 72 KEFI 75
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRDFFNQLDIDGSGRLDF 75
DE +RL + F+ +D D + +S EF LQ + R D F D DG+G +DF
Sbjct: 17 ADEIKRL-GKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIF---DTDGNGEVDF 72
Query: 76 KEVL 79
KE +
Sbjct: 73 KEFI 76
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 33.5 bits (75), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 23 FNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRD-FFNQLDIDGSGRLDFKEVLTL 81
F F D DG +S +E M + + D ++D DGSG +DF+E L +
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
Query: 82 YY 83
Sbjct: 82 MV 83
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 33.5 bits (75), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 59/151 (39%), Gaps = 18/151 (11%)
Query: 1 MEALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTR 59
ME LR L+ SG + +FF+ +D+DG+R + EF ++ L +
Sbjct: 21 MEKLRAQCLSRGASGI----QGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAE 76
Query: 60 DFFNQLDIDGSGRLDFKEVLTLYYILKSRRPICGRCRIFITNEYFACMRCFETGSAAYSI 119
+ D +GSG LD +E L++ RP + R + FA + G
Sbjct: 77 GVCRKWDRNGSGTLDLEE------FLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDD 130
Query: 120 CLECFGDK-------GSLNHNHVRSYFVDNF 143
+ + G + V F+DNF
Sbjct: 131 LRGVYSGRAHPKVRSGEWTEDEVLRRFLDNF 161
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 25 QFFQSMDKDGNRRVSYREFSDFMSLQAHDE-NMRTRDFFNQLDIDGSGRLDFKEVLTLYY 83
Q F++ D + + + + E+ +SL + + + R +F D+DG+G +D E+L
Sbjct: 56 QMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLN--- 112
Query: 84 ILKSRRPICGRCRIFITNEYFACM 107
I+K+ R I RC +T E F M
Sbjct: 113 IIKAIRAI-NRCNEAMTAEEFTNM 135
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 23 FNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLDFKEVLTL 81
F + F DKDG+ ++ E + + SL + +D +++D DG+G ++F E L+L
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
Score = 26.2 bits (56), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Query: 9 LAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDI 67
+A TD E L + F+ DKD N +S E M +L + + D+
Sbjct: 72 MAKKVKDTDAEEEL-KEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADL 130
Query: 68 DGSGRLDFKEVLTLYYILK 86
DG G+++++E + + ++
Sbjct: 131 DGDGQVNYEEFVKMMMTVR 149
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 33.1 bits (74), Expect = 0.063, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 27 FQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRDFFNQLDIDGSGRLDFKE 77
FQ D+DGN ++S E + L H E+ ++ + +D + G +DF+E
Sbjct: 432 FQKFDQDGNGKISVDELASVFGLD-HLESKTWKEMISGIDSNNDGDVDFEE 481
Score = 26.6 bits (57), Expect = 6.4, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 49 LQAHDENMRTRDFFNQLDIDGSGRLDFKEVLTLY 82
L + +E D F +D +G G+LD +E++ Y
Sbjct: 339 LTSQEETKELTDIFRHIDKNGDGQLDRQELIDGY 372
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 33.1 bits (74), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRDFFNQLDIDGSGRLDF 75
DE +RL + F+ +D D + +S EF LQ + R D F D DG+G +DF
Sbjct: 2 ADEIKRL-GKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIF---DTDGNGEVDF 57
Query: 76 KE 77
KE
Sbjct: 58 KE 59
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 33.1 bits (74), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRDFFNQLDIDGSGRLDF 75
DE +RL + F+ +D D + +S EF LQ + R D F D DG+G +DF
Sbjct: 3 ADEIKRL-GKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIF---DTDGNGEVDF 58
Query: 76 KE 77
KE
Sbjct: 59 KE 60
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T EE++ + + FQ DKD + +++ E M +L A+ + + D D SG+ D
Sbjct: 9 TAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFD 68
Query: 75 FKEVLTL 81
+ LT+
Sbjct: 69 QETFLTI 75
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 23 FNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRD-FFNQLDIDGSGRLDFKEVLTL 81
F F D DG +S +E M + D ++D DGSG +DF+E L +
Sbjct: 19 FKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVM 78
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 27 FQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRDFFNQLDIDGSGRLDFKE 77
FQ D+DGN ++S E + L H E+ ++ + +D + G +DF+E
Sbjct: 149 FQKFDQDGNGKISVDELASVFGLD-HLESKTWKEMISGIDSNNDGDVDFEE 198
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 26 FFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRDF-FNQLDIDGSGRLDFKEVLTLY 82
F+ +D +G+ VSY E F+S + +N + F +D DG+G +D E Y
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62
Score = 25.8 bits (55), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 20 RRLFNQFFQSMDKDGNRRVSYREFSDF 46
+L F+S+D DGN + EF+ F
Sbjct: 35 EQLLQLIFKSIDADGNGEIDQNEFAKF 61
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 23 FNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRD-FFNQLDIDGSGRLDFKEVLTL 81
F F D DG +S +E M + + D ++D DGSG +DF+E L +
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFLVM 81
Query: 82 YY 83
Sbjct: 82 MV 83
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 23 FNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRD-FFNQLDIDGSGRLDFKEVLTL 81
F F D DG +S + M + + D ++D DGSG +DF+E L +
Sbjct: 22 FKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
Query: 82 YY 83
Sbjct: 82 MV 83
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 26 FFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRD---FFNQLDIDGSGRLDFKEVLTLY 82
F +MDKDG+ + +EF + + + + + D FN++D +GSG + F E + +
Sbjct: 138 MFDTMDKDGSLLLELQEFKEALP-KLKEWGVDITDATTVFNEIDTNGSGVVTFDE-FSCW 195
Query: 83 YILKSRRPICG 93
+ K + +CG
Sbjct: 196 AVTK-KLQVCG 205
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 32 KDG----NRRVSYREFSDFMSLQAHDENMRTR-DFFNQLDIDGSGRLDFKEVL-TLYYIL 85
KDG +R+V++ + E+ R + F Q D +G+G+L F+EVL Y IL
Sbjct: 22 KDGKTTADRKVAWERIRCAIPRDKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGIL 81
Query: 86 K 86
K
Sbjct: 82 K 82
>pdb|1QLS|A Chain A, S100c (S100a11),Or Calgizzarin, In Complex With Annexin
I N-Terminus
Length = 99
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Query: 16 TDEER---RLFNQFFQSMDKDGNR-RVSYREFSDFMS--LQAHDENMRTRDFFN----QL 65
T+ ER L F + +DGN ++S EF FM+ L A +N + + +L
Sbjct: 6 TETERCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKL 65
Query: 66 DIDGSGRLDFKEVLTLY 82
D+D G+LDF+E L L
Sbjct: 66 DLDSDGQLDFQEFLNLI 82
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+++ + F D DG+ + +E M +L + + +D DGSG +D
Sbjct: 3 TEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTID 62
Query: 75 FKEVLTLYYIL----KSRRPICGRCRIFITNE 102
F+E L + SR I R+F +E
Sbjct: 63 FEEFLQMMTAKMGERDSREEIMKAFRLFDDDE 94
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 30.4 bits (67), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 49 LQAHDENMRTRDFFNQLDIDGSGRLDFKEVLTLYYILKSRRPICGRCR 96
L +E D F +LD +G G+LD KE++ Y +L++ + G +
Sbjct: 348 LTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELK 395
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 24 NQFFQSMDKDGNRRVSYREF-SDFMSLQAHDENMRTRDFFNQLDIDGSGRLDFKEVLTLY 82
+ + +D D N + Y EF S M Q R R FN D D SG++ +E+ L+
Sbjct: 402 DNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLF 461
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 30.4 bits (67), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 61/163 (37%), Gaps = 33/163 (20%)
Query: 24 NQFFQSMDKDGNRRVSYR-EFSDFMSLQAHDENMRTRDFFNQ----LDIDGSG------R 72
N +FQSM + RRVS+R E S+ + +D + R FF Q L G G +
Sbjct: 17 NLYFQSMHQLQPRRVSFRGEASETLQSPGYDPS-RPESFFQQSFQRLSRLGHGSYGEVFK 75
Query: 73 LDFKEVLTLYYILKSRRPICG---RCRIFI-------TNEYFACMR---CFETGSAAY-- 117
+ KE LY + +S P G R R ++ C+R +E G Y
Sbjct: 76 VRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135
Query: 118 ------SICLECFGDKGSLNHNHVRSYFVDNFSLLESLRKKPL 154
S+ C SL V Y D L L + L
Sbjct: 136 TELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGL 178
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 59 RDFFNQLDIDGSGRLDFKEVLTL 81
+D N++D DG+G +DF E LT+
Sbjct: 4 QDMINEVDADGNGTIDFPEFLTM 26
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 30.0 bits (66), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 9/73 (12%)
Query: 20 RRLFNQFFQSMDKDGNRRVSYREFSDFMSLQA---HDENMRTRDFFNQLDIDGSGRLDFK 76
R F DKDG+ +S E+ + + DE+ F D+D SG+LD
Sbjct: 115 RNWGEAVFDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKT--FKHCDLDNSGKLDVD 172
Query: 77 EV----LTLYYIL 85
E+ L +Y L
Sbjct: 173 EMTRQHLGFWYTL 185
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 29.6 bits (65), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRDFFNQLDIDGSGRLDF 75
D+ R+F +F D +G+ ++S E +D + + ++D DG G +DF
Sbjct: 1 ADDMERIFKRF----DTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDF 56
Query: 76 KEVLT 80
E ++
Sbjct: 57 NEFIS 61
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 29.6 bits (65), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+++ + F D DG + +E M +L + + +++D +G+G+++
Sbjct: 26 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 85
Query: 75 FKEVLTLY 82
F + LT+
Sbjct: 86 FGDFLTVM 93
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 29.6 bits (65), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRDFFNQLDIDGSGRLDF 75
D+ R+F +F D +G+ ++S E +D + + ++D DG G +DF
Sbjct: 2 ADDMERIFKRF----DTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDF 57
Query: 76 KEVLT 80
E ++
Sbjct: 58 NEFIS 62
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 31 DKDGNRRVSYREFSDFMSLQAHDENMRTRDFFNQLDIDGSGRLDFKEVLT 80
DK+ + +++ EF+ +++ + + FNQ+D +G+G L E+LT
Sbjct: 112 DKNADGQINADEFAAWLTALGMSK-AEAAEAFNQVDTNGNGELSLDELLT 160
>pdb|1LS1|A Chain A, T. Aquaticus Ffh Ng Domain At 1.1a Resolution
Length = 295
Score = 29.3 bits (64), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 40 YREFSDFMSLQAHDENMRTRDFFNQLDIDGSGRLDFKEVLTLYYILKSRRPIC 92
Y + + +A ++ R+ + + + GSG+ L LYY K RRP+
Sbjct: 79 YEALKEALGGEARLPVLKDRNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLL 131
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 29.3 bits (64), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
Query: 25 QFFQSMDKDGNRRVSYREFSDFMS--LQAHDENMRTRDF---FNQLDIDGSGRLDFKEVL 79
+ F+ DK+GN +S +D M L DE + + D +++D DGSG +DF+E +
Sbjct: 7 EAFRLYDKEGNGYIS----TDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 62
Query: 80 TL 81
+
Sbjct: 63 GV 64
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 29.3 bits (64), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 9/60 (15%)
Query: 27 FQSMDKDGNRRVSYREFSDFMS--LQAHDENMRTRDF---FNQLDIDGSGRLDFKEVLTL 81
F+ DK+GN +S +D M L DE + + D +++D DGSG +DF+E + +
Sbjct: 97 FRLYDKEGNGYIS----TDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGV 152
>pdb|1FFH|A Chain A, N And Gtpase Domains Of The Signal Sequence Recognition
Protein Ffh From Thermus Aquaticus
Length = 294
Score = 29.3 bits (64), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 40 YREFSDFMSLQAHDENMRTRDFFNQLDIDGSGRLDFKEVLTLYYILKSRRPIC 92
Y + + +A ++ R+ + + + GSG+ L LYY K RRP+
Sbjct: 78 YEALKEALGGEARLPVLKDRNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLL 130
>pdb|1O87|A Chain A, A New Mggdp Complex Of The Ffh Ng Domain
pdb|1O87|B Chain B, A New Mggdp Complex Of The Ffh Ng Domain
pdb|2C04|A Chain A, Gmppcp Complex Of Srp Gtpase Ffh Ng Domain At Ultra-High
Resolution
pdb|2C04|B Chain B, Gmppcp Complex Of Srp Gtpase Ffh Ng Domain At Ultra-High
Resolution
pdb|2J45|A Chain A, Water Structure Of T. Aquaticus Ffh Ng Domain At 1.1a
Resolution
pdb|2J45|B Chain B, Water Structure Of T. Aquaticus Ffh Ng Domain At 1.1a
Resolution
pdb|2J46|A Chain A, Water Structure Of T. Aquaticus Ffh Ng Domain At 1.1a
Resolution
pdb|2J46|B Chain B, Water Structure Of T. Aquaticus Ffh Ng Domain At 1.1a
Resolution
Length = 297
Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 40 YREFSDFMSLQAHDENMRTRDFFNQLDIDGSGRLDFKEVLTLYYILKSRRPIC 92
Y + + +A ++ R+ + + + GSG+ L LYY K RRP+
Sbjct: 79 YEALKEALGGEARLPVLKDRNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLL 131
>pdb|3NG1|A Chain A, N And Gtpase Domains Of The Signal Sequence Recognition
Protein Ffh From Thermus Aquaticus
pdb|3NG1|B Chain B, N And Gtpase Domains Of The Signal Sequence Recognition
Protein Ffh From Thermus Aquaticus
pdb|1OKK|A Chain A, Homo-Heterodimeric Complex Of The Srp Gtpases
pdb|2CNW|A Chain A, Gdpalf4 Complex Of The Srp Gtpases Ffh And Ftsy
pdb|2CNW|B Chain B, Gdpalf4 Complex Of The Srp Gtpases Ffh And Ftsy
pdb|2CNW|C Chain C, Gdpalf4 Complex Of The Srp Gtpases Ffh And Ftsy
pdb|2J7P|A Chain A, Gmppnp-Stabilized Ng Domain Complex Of The Srp Gtpases Ffh
And Ftsy
pdb|2J7P|B Chain B, Gmppnp-Stabilized Ng Domain Complex Of The Srp Gtpases Ffh
And Ftsy
pdb|1NG1|A Chain A, N And Gtpase Domains Of The Signal Sequence Recognition
Protein Ffh From Thermus Aquaticus
pdb|2XKV|A Chain A, Atomic Model Of The Srp-Ftsy Early Conformation
Length = 294
Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 40 YREFSDFMSLQAHDENMRTRDFFNQLDIDGSGRLDFKEVLTLYYILKSRRPIC 92
Y + + +A ++ R+ + + + GSG+ L LYY K RRP+
Sbjct: 79 YEALKEALGGEARLPVLKDRNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLL 131
>pdb|1RJ9|B Chain B, Structure Of The Heterodimer Of The Conserved Gtpase
Domains Signal Recognition Particle (Ffh) And Its
Receptor (Ftsy)
Length = 300
Score = 29.3 bits (64), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 40 YREFSDFMSLQAHDENMRTRDFFNQLDIDGSGRLDFKEVLTLYYILKSRRPIC 92
Y + + +A ++ R+ + + + GSG+ L LYY K RRP+
Sbjct: 79 YEALKEALGGEARLPVLKDRNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLL 131
>pdb|2C03|A Chain A, Gdp Complex Of Srp Gtpase Ffh Ng Domain
pdb|2C03|B Chain B, Gdp Complex Of Srp Gtpase Ffh Ng Domain
Length = 297
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 40 YREFSDFMSLQAHDENMRTRDFFNQLDIDGSGRLDFKEVLTLYYILKSRRPIC 92
Y + + +A ++ R+ + + + GSG+ L LYY K RRP+
Sbjct: 79 YEALKEALGGEARLPVLKDRNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLL 131
>pdb|1JPJ|A Chain A, Gmppnp Complex Of Srp Gtpase Ng Domain
pdb|1JPN|A Chain A, Gmppnp Complex Of Srp Gtpase Ng Domain
pdb|1JPN|B Chain B, Gmppnp Complex Of Srp Gtpase Ng Domain
pdb|1RY1|U Chain U, Structure Of The Signal Recognition Particle Interacting
With The Elongation-Arrested Ribosome
Length = 296
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 40 YREFSDFMSLQAHDENMRTRDFFNQLDIDGSGRLDFKEVLTLYYILKSRRPIC 92
Y + + +A ++ R+ + + + GSG+ L LYY K RRP+
Sbjct: 79 YEALKEALGGEARLPVLKDRNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLL 131
>pdb|2NG1|A Chain A, N And Gtpase Domains Of The Signal Sequence Recognition
Protein Ffh From Thermus Aquaticus
Length = 293
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 40 YREFSDFMSLQAHDENMRTRDFFNQLDIDGSGRLDFKEVLTLYYILKSRRPIC 92
Y + + +A ++ R+ + + + GSG+ L LYY K RRP+
Sbjct: 78 YEALKEALGGEARLPVLKDRNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLL 130
>pdb|2JPT|A Chain A, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
pdb|2JPT|B Chain B, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
Length = 93
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
Query: 20 RRLFNQFFQSMDKDGNR-RVSYREFSDFMS------LQAHDENMRTRDFFNQLDIDGSGR 72
L N F K+G++ ++S +E + + L A + +LD DG G
Sbjct: 9 ETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDADAVDKVMKELDEDGDGE 68
Query: 73 LDFKEVLTLYYIL 85
+DF+E + L L
Sbjct: 69 VDFQEYVVLVAAL 81
>pdb|2IY3|A Chain A, Structure Of The E. Coli Signal Recognition Particle Bound
To A Translating Ribosome
Length = 432
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 40 YREFSDFMSLQAHDENMRTRDFFNQLDIDGSGRLDFKEVLTLYYILKSRRPIC 92
Y + + +A ++ R+ + + + GSG+ L LYY K RRP+
Sbjct: 79 YEALKEALGGEARLPVLKDRNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLL 131
>pdb|2FFH|A Chain A, The Signal Sequence Binding Protein Ffh From Thermus
Aquaticus
pdb|2FFH|B Chain B, The Signal Sequence Binding Protein Ffh From Thermus
Aquaticus
pdb|2FFH|C Chain C, The Signal Sequence Binding Protein Ffh From Thermus
Aquaticus
Length = 425
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 40 YREFSDFMSLQAHDENMRTRDFFNQLDIDGSGRLDFKEVLTLYYILKSRRPIC 92
Y + + +A ++ R+ + + + GSG+ L LYY K RRP+
Sbjct: 79 YEALKEALGGEARLPVLKDRNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLL 131
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQLDIDGSGRLD 74
TD E + + F+ DKDGN +S E M+ L + + + DIDG G+++
Sbjct: 1 TDSEEEI-REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 59
Query: 75 FKEVLTL 81
++E + +
Sbjct: 60 YEEFVQM 66
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/82 (21%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 1 MEALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMSLQAHDE-NMRTR 59
ME +K+ ++ G + + F++ D +G+ + +REF +S+ + + + +
Sbjct: 45 MEEFKKIYGNFFPYG--DASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLK 102
Query: 60 DFFNQLDIDGSGRLDFKEVLTL 81
F+ D+DG+G + E+L +
Sbjct: 103 WAFSMYDLDGNGYISKAEMLEI 124
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With
Pyrophosphate
Length = 67
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQLDIDGSGRLD 74
TD E + + F+ DKDGN +S E M+ L + + + DIDG G+++
Sbjct: 1 TDSEEEI-REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 59
Query: 75 FKEVLTL 81
++E + +
Sbjct: 60 YEEFVQM 66
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin
Carboxy-Terminal Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQLDIDGSGRLD 74
TD E + + F+ DKDGN +S E M+ L + + + DIDG G+++
Sbjct: 4 TDSEEEI-REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 62
Query: 75 FKEVLTL 81
++E + +
Sbjct: 63 YEEFVQM 69
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin And 1mm Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin
Length = 74
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQLDIDGSGRLD 74
TD E + + F+ DKDGN +S E M+ L + + + DIDG G+++
Sbjct: 5 TDSEEEI-REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 63
Query: 75 FKEVLTL 81
++E + +
Sbjct: 64 YEEFVQM 70
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From
Calmodulin To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQLDIDGSGRLD 74
TD E + + F+ DKDGN +S E M+ L + + + DIDG G+++
Sbjct: 2 TDSEEEI-REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 60
Query: 75 FKEVLTL 81
++E + +
Sbjct: 61 YEEFVQM 67
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 3 ALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREF-SDFMSLQAHDENMRTRDF 61
ALR +A S ++EE + F +D D + ++++ E + + A+ + D
Sbjct: 13 ALRVIA----ESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDL 68
Query: 62 FNQLDIDGSGRLDFKEVLT 80
D+D SG +D+KE +
Sbjct: 69 XQAADVDNSGTIDYKEFIA 87
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal
Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal
Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe
Bound With Er Alpha Peptide
Length = 67
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 25 QFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQLDIDGSGRLDFKEVLTL 81
+ F+ DKDGN +S E M+ L + + + DIDG G+++++E + +
Sbjct: 6 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 63
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 23 FNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRD----FFNQLDIDGSGRLDFKEV 78
+ QS+D D N Y E+S+F+++ + + +R+ F Q D DGSG++ +E+
Sbjct: 363 VDHILQSVDFDRN---GYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEEL 419
Query: 79 LTLYYI 84
L+ +
Sbjct: 420 GRLFGV 425
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQLDIDGSGRLD 74
TD E + + F+ DKDGN +S E M+ L + + + DIDG G+++
Sbjct: 25 TDSEEEI-REAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 83
Query: 75 FKEVLTL 81
++E + +
Sbjct: 84 YEEFVQM 90
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRT--RDFFNQLDIDGSGRL 73
++EE + F+ +D D + +++ E D + + E M + +D + DID SG +
Sbjct: 18 SEEEIGGLKELFKMIDTDNSGTITFDELKDGLK-RVGSELMESEIKDLMDAADIDKSGTI 76
Query: 74 DFKE 77
D+ E
Sbjct: 77 DYGE 80
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 10 AYYNSGTDEERRLFNQFFQSMDKDGNRR-VSYREFSDFMSLQAHDENMRT-RDFFNQLDI 67
A TDE++ F F +D +S +E M + + ++ +++D
Sbjct: 7 AAVEQLTDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDE 66
Query: 68 DGSGRLDFKEVLTLYY 83
DGSG +DF E L +
Sbjct: 67 DGSGTVDFDEFLVMMV 82
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRT--RDFFNQLDIDGSGRL 73
++EE + F+ +D D + +++ E D + + E M + +D + DID SG +
Sbjct: 5 SEEEIGGLKELFKMIDTDNSGTITFDELKDGLK-RVGSELMESEIKDLMDAADIDKSGTI 63
Query: 74 DFKEVLT 80
D+ E +
Sbjct: 64 DYGEFIA 70
>pdb|4FIP|A Chain A, Structure Of The Saga Ubp8(S144n)SGF11(1-72,
Delta-Znf)SUS1SGF73 Dub Module
pdb|4FIP|E Chain E, Structure Of The Saga Ubp8(S144n)SGF11(1-72,
Delta-Znf)SUS1SGF73 Dub Module
pdb|4FK5|A Chain A, Structure Of The Saga Ubp8(S144n)SGF11SUS1SGF73 DUB MODULE
Length = 476
Score = 28.1 bits (61), Expect = 2.4, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 106 CMRCFETGSAAYSICLECFGDKGSLNHNHVRSY 138
C C E S A +CL+C G G NH+H S+
Sbjct: 51 CGTCHEINSGATFMCLQC-GFCGCWNHSHFLSH 82
>pdb|3MHH|A Chain A, Structure Of The Saga Ubp8SGF11SUS1SGF73 DUB MODULE
pdb|3MHS|A Chain A, Structure Of The Saga Ubp8SGF11SUS1SGF73 DUB MODULE BOUND
Ubiquitin Aldehyde
pdb|4FJC|A Chain A, Structure Of The Saga Ubp8SGF11(1-72, Delta-Znf)SUS1SGF73
DUB Module
pdb|4FJC|E Chain E, Structure Of The Saga Ubp8SGF11(1-72, Delta-Znf)SUS1SGF73
DUB Module
Length = 476
Score = 28.1 bits (61), Expect = 2.4, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 106 CMRCFETGSAAYSICLECFGDKGSLNHNHVRSY 138
C C E S A +CL+C G G NH+H S+
Sbjct: 51 CGTCHEINSGATFMCLQC-GFCGCWNHSHFLSH 82
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 27 FQSMDKDGNRRVSYREFSDFM-SLQAHDENMR-TRDFFNQLDIDGSGRLDFKEVLTL 81
F+ D +G+ +S E + M +L H R + +D++G GR+DF+E + +
Sbjct: 94 FREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRM 150
>pdb|3M99|A Chain A, Structure Of The Ubp8-Sgf11-Sgf73-Sus1 Saga Dub Module
Length = 471
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 106 CMRCFETGSAAYSICLECFGDKGSLNHNHVRSY 138
C C E S A +CL+C G G NH+H S+
Sbjct: 46 CGTCHEINSGATFMCLQC-GFCGCWNHSHFLSH 77
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Query: 15 GTDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMR-TRDFFNQLDIDGSGR 72
G E R F +F D +G+ +S E + M L H R + +D++G GR
Sbjct: 100 GVKELRDAFREF----DTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGR 155
Query: 73 LDFKEVLTL 81
+DF+E + +
Sbjct: 156 VDFEEFVRM 164
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 21 RLFNQFFQSMDKDGNRRVSYREF 43
R + FQ +DK+G+ VS+ EF
Sbjct: 47 RTLDDLFQELDKNGDGEVSFEEF 69
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 27.3 bits (59), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
Query: 20 RRLFNQFFQSMDKDGNR-RVSYREFSDFMS------LQAHDENMRTRDFFNQLDIDGSGR 72
L N F K+G++ ++S +E D + L + +LD +G G
Sbjct: 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGE 68
Query: 73 LDFKEVLTLYYIL 85
+DF+E + L L
Sbjct: 69 VDFQEFVVLVAAL 81
>pdb|1NSH|A Chain A, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
pdb|1NSH|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
Length = 101
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 16 TDEER---RLFNQFFQSMDKDGNR-RVSYREFSDFMS--LQAHDENMRTRDFFN----QL 65
T+ ER L F + KDG+ +S EF FM+ L A +N + + +L
Sbjct: 4 TETERCIESLIAVFQKYAGKDGHSVTLSKTEFLSFMNTELAAFTKNQKDPGVLDRMMKKL 63
Query: 66 DIDGSGRLDFKEVLTL 81
D++ G+LDF+E L L
Sbjct: 64 DLNSDGQLDFQEFLNL 79
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 14/81 (17%)
Query: 20 RRLFNQFFQSMDKDGNRRVSYREFSDFMS----LQAHDENMRTRDFFNQLDIDGSGRLDF 75
R + F +DKD N +S E+ + +Q+ ++ T F DID SG+LD
Sbjct: 108 RLWGDALFDIIDKDQNGAISLDEWKAYTKSAGIIQSSEDCEET---FRVCDIDESGQLDV 164
Query: 76 KEV----LTLYYILKSRRPIC 92
E+ L +Y + P C
Sbjct: 165 DEMTRQHLGFWYTMD---PAC 182
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+++ + F D DG + +E M +L + + +++D +G+G+++
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 75 FKEVLTLY 82
F + LT+
Sbjct: 61 FGDFLTVM 68
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 26.9 bits (58), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 1 MEALRKVALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFS 44
++ R+VALA+ T E+ +FF+ +D DGN ++ EF+
Sbjct: 20 LDEFREVALAFSPYFTQED---IVKFFEEIDVDGNGELNADEFT 60
Score = 26.2 bits (56), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 27 FQSMDKDGNRRVSYREFSDF-MSLQAHDENMRTRDFFNQLDIDGSGRLDFKE 77
F+ DK+ + ++S EF + ++ + FF ++D+DG+G L+ E
Sbjct: 7 FEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADE 58
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 26.9 bits (58), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 15 GTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMS---LQAHDENMRTRDFFNQLDIDGSG 71
G E FN+ F D GN ++ + EF M Q E++ R F D +G+G
Sbjct: 36 GVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDI-LRQAFRTFDPEGTG 94
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 26.9 bits (58), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 27 FQSMDKDGNRRVSYREFSDFM-SLQAHDENMR-TRDFFNQLDIDGSGRLDFKEVLTL 81
F+ D +G+ +S E + M L H R + +D++G GR+DF+E + +
Sbjct: 94 FREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRM 150
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 26.9 bits (58), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 8 ALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRDFFNQL 65
A Y D R+ + FFQ MDK+ + V+ EF + S Q D MR+ F +
Sbjct: 124 AYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLDEFLE--SCQEDDNIMRSLQLFQNV 179
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 26.9 bits (58), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 24 NQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRD----FFNQLDIDGSGRLDFKEVL 79
+ QS+D D N Y E+S+F+++ + + +R+ F Q D DGSG++ +E+
Sbjct: 90 DHILQSVDFDRN---GYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELG 146
Query: 80 TLYYI 84
L+ +
Sbjct: 147 RLFGV 151
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 10 AYYNSGTDEERRLFNQFFQSMDKDGNRR-VSYREFSDFMSLQAHDENMRT-RDFFNQLDI 67
A T+E++ F F +D +S +E M + + ++ +++D
Sbjct: 7 AAVEQLTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDE 66
Query: 68 DGSGRLDFKEVLTLYY 83
DGSG +DF E L +
Sbjct: 67 DGSGTVDFDEFLVMMV 82
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 17 DEERRLFNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRDFFNQLDID 68
D R+ + FFQ MDK+ + V+ EF + S Q D MR+ F + ++
Sbjct: 169 DTPRQHVDVFFQKMDKNKDGIVTLDEFLE--SCQEDDNIMRSLQLFQNVMVE 218
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
T+E+ F F DK+G +++ RE M +L + +D + + + +G+L+
Sbjct: 5 TEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLN 64
Query: 75 FKE 77
F E
Sbjct: 65 FTE 67
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin
Bound To The Iq Motif Of Nav1.2
Length = 73
Score = 26.6 bits (57), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 17 DEERRLFNQFFQSMDKDGNRRVSYREFSDFMS-LQAHDENMRTRDFFNQLDIDGSGRLDF 75
D E L + F+ D+DGN +S E M+ L + + + DIDG G +++
Sbjct: 5 DSEEELI-EAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINY 63
Query: 76 KE 77
+E
Sbjct: 64 EE 65
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
Query: 13 NSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENM-----RTRDFFNQLDI 67
N G+ E ++ + +D DG+ + Y EF A D + R F D
Sbjct: 374 NEGSTIEDQI-DSLMPLLDMDGSGSIEYSEFI----ASAIDRTILLSRERMERAFKMFDK 428
Query: 68 DGSGRLDFKEVLTLY 82
DGSG++ KE+ L+
Sbjct: 429 DGSGKISTKELFKLF 443
Score = 26.2 bits (56), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 20 RRLFNQFFQSMDKDGNRRVSYRE-FSDFMSLQAHDENMRTRDFFNQLDIDGSGRLDFKEV 78
R + F+ DKDG+ ++S +E F F + + Q+D + G +DF E
Sbjct: 416 RERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEF 475
Query: 79 LTL 81
+ +
Sbjct: 476 VEM 478
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 26.6 bits (57), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 27 FQSMDKDGNRRVSYREFSDFM-SLQAHDENMR-TRDFFNQLDIDGSGRLDFKEVLTL 81
F+ D +G+ +S E + M L H R + +D++G GR+DF+E + +
Sbjct: 13 FREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRM 69
>pdb|2YK6|A Chain A, Structure Of Neisseria Los-Specific Sialyltransferase
(Nst), In Complex With Cdp
Length = 326
Score = 26.6 bits (57), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 8 ALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRT 58
++A + +DE +F MD DG R+++Y D L+A DE T
Sbjct: 152 SIAKTRNASDEHYTIFKGLKNIMD-DGRRKMTYLPLFDASELKAGDETGGT 201
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 16 TDEERRLFNQFFQSMDKDGNRRVSYREFSDFM-SLQAHDENMRTRDFFNQLDIDGSGRLD 74
TD E L + F+ DKD N +S E M +L + + D+DG G+++
Sbjct: 5 TDAEEEL-KEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVN 63
Query: 75 FKEVLTLYYILK 86
++E + + ++
Sbjct: 64 YEEFVKMMMTVR 75
>pdb|2YK7|A Chain A, Structure Of Neisseria Los-Specific Sialyltransferase
(Nst), In Complex With Cmp-3f-Neu5ac
Length = 326
Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 8 ALAYYNSGTDEERRLFNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRT 58
++A + +DE +F MD DG R+++Y D L+A DE T
Sbjct: 152 SIAKTRNASDEHYTIFKGLKNIMD-DGRRKMTYLPLFDASELKAGDETGGT 201
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 26.2 bits (56), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 17 DEERRLFNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRDFFNQL 65
D R+ + FFQ MDK+ + V+ EF + S Q D MR+ F +
Sbjct: 136 DTPRQHVDVFFQKMDKNKDGIVTLDEFLE--SXQEDDNIMRSLQLFQNV 182
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 26.2 bits (56), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 26 FFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRDF-FNQLDIDGSGRLDFKEVLTLYYI 84
F + D D N VS+ +F +S+ ++ FN DI+ G + +E+L I
Sbjct: 107 LFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLD---I 163
Query: 85 LKSRRPICGRC 95
+K+ + G+C
Sbjct: 164 MKAIYDMMGKC 174
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 26.2 bits (56), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 17 DEERRLFNQFFQSMDKDGNRRVSYREFSDFMSLQAHDENMRTRDFFNQL 65
D R+ + FFQ MDK+ + V+ EF + S Q D MR+ F +
Sbjct: 133 DTPRQHVDVFFQKMDKNKDGIVTLDEFLE--SCQEDDNIMRSLQLFQNV 179
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.327 0.140 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,683,514
Number of Sequences: 62578
Number of extensions: 177930
Number of successful extensions: 1212
Number of sequences better than 100.0: 190
Number of HSP's better than 100.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 782
Number of HSP's gapped (non-prelim): 393
length of query: 158
length of database: 14,973,337
effective HSP length: 91
effective length of query: 67
effective length of database: 9,278,739
effective search space: 621675513
effective search space used: 621675513
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 47 (22.7 bits)