Your job contains 1 sequence.
>037529
MIVSVILALFLPCAGMSLVFIVYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELDKL
PKISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKLD
SHFFNALESDNPC
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 037529
(133 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2165735 - symbol:AT5G42200 species:3702 "Arabi... 387 7.2e-36 1
TAIR|locus:2181032 - symbol:DAFL2 "DAF-Like gene 2" speci... 189 6.9e-15 1
TAIR|locus:2122378 - symbol:AT4G09130 species:3702 "Arabi... 193 7.4e-15 1
TAIR|locus:2028436 - symbol:AT1G49230 species:3702 "Arabi... 187 1.1e-14 1
TAIR|locus:2090980 - symbol:AT3G14320 species:3702 "Arabi... 186 1.4e-14 1
TAIR|locus:2140069 - symbol:AT4G40070 species:3702 "Arabi... 188 1.8e-14 1
TAIR|locus:2011686 - symbol:ATL8 species:3702 "Arabidopsi... 185 1.8e-14 1
TAIR|locus:2124700 - symbol:AT4G10160 species:3702 "Arabi... 185 1.8e-14 1
TAIR|locus:2096444 - symbol:AT3G03550 species:3702 "Arabi... 187 3.4e-14 1
TAIR|locus:2142449 - symbol:RING1 species:3702 "Arabidops... 184 3.6e-14 1
TAIR|locus:2825708 - symbol:AT1G20823 species:3702 "Arabi... 182 3.8e-14 1
TAIR|locus:2206722 - symbol:AT1G35330 species:3702 "Arabi... 185 4.2e-14 1
TAIR|locus:2053776 - symbol:AT2G42350 species:3702 "Arabi... 180 6.2e-14 1
TAIR|locus:2153554 - symbol:DAF "DEFECTIVE IN ANTHER DEHI... 180 6.2e-14 1
TAIR|locus:2103162 - symbol:DAFL1 "DAF-Like gene 1" speci... 178 1.0e-13 1
TAIR|locus:2151421 - symbol:AT5G17600 species:3702 "Arabi... 182 1.3e-13 1
TAIR|locus:2193992 - symbol:ATL3 species:3702 "Arabidopsi... 179 1.9e-13 1
TAIR|locus:2124695 - symbol:AT4G10150 species:3702 "Arabi... 175 2.1e-13 1
TAIR|locus:2096309 - symbol:ATL6 "Arabidopsis toxicos en ... 181 2.2e-13 1
TAIR|locus:505006547 - symbol:AT4G33565 species:3702 "Ara... 180 2.3e-13 1
TAIR|locus:4515103413 - symbol:ATL4H species:3702 "Arabid... 176 3.5e-13 1
TAIR|locus:2207066 - symbol:AT1G72220 species:3702 "Arabi... 179 4.0e-13 1
TAIR|locus:2044757 - symbol:ATL9 "Arabidopsis toxicos en ... 178 4.1e-13 1
TAIR|locus:2054049 - symbol:MEE16 "maternal effect embryo... 179 4.3e-13 1
TAIR|locus:2118666 - symbol:AT4G30400 species:3702 "Arabi... 179 5.5e-13 1
TAIR|locus:2007008 - symbol:AT1G33480 species:3702 "Arabi... 171 5.6e-13 1
TAIR|locus:2830088 - symbol:AT3G18773 species:3702 "Arabi... 170 7.1e-13 1
UNIPROTKB|Q9LRB7 - symbol:EL5.1 "E3 ubiquitin-protein lig... 174 7.2e-13 1
TAIR|locus:2061698 - symbol:AT2G20030 species:3702 "Arabi... 175 9.6e-13 1
TAIR|locus:2028406 - symbol:AT1G49210 species:3702 "Arabi... 168 1.2e-12 1
TAIR|locus:2053994 - symbol:AT2G18670 species:3702 "Arabi... 166 1.9e-12 1
TAIR|locus:2199902 - symbol:AT1G23980 species:3702 "Arabi... 171 2.3e-12 1
TAIR|locus:2062502 - symbol:AT2G35420 species:3702 "Arabi... 165 2.4e-12 1
TAIR|locus:2019110 - symbol:AT1G74410 species:3702 "Arabi... 165 2.4e-12 1
TAIR|locus:2122363 - symbol:AT4G09120 species:3702 "Arabi... 169 3.1e-12 1
TAIR|locus:2044742 - symbol:AT2G34990 species:3702 "Arabi... 167 3.3e-12 1
TAIR|locus:2207026 - symbol:AT1G72200 species:3702 "Arabi... 169 4.8e-12 1
TAIR|locus:2197026 - symbol:AT1G53820 species:3702 "Arabi... 166 4.8e-12 1
TAIR|locus:2062008 - symbol:AT2G47560 species:3702 "Arabi... 161 6.4e-12 1
TAIR|locus:2028411 - symbol:AT1G49200 species:3702 "Arabi... 161 6.4e-12 1
TAIR|locus:2146330 - symbol:CNI1 "carbon/nitrogen insensi... 166 8.1e-12 1
TAIR|locus:2122348 - symbol:AT4G09100 species:3702 "Arabi... 160 8.2e-12 1
TAIR|locus:2028506 - symbol:AT1G49220 species:3702 "Arabi... 160 8.3e-12 1
TAIR|locus:2009527 - symbol:ATL15 "Arabidopsis toxicos en... 166 8.8e-12 1
TAIR|locus:2089398 - symbol:ATL2 "TOXICOS EN LEVADURA 2" ... 163 9.8e-12 1
TAIR|locus:2125364 - symbol:AT4G35840 species:3702 "Arabi... 158 1.3e-11 1
TAIR|locus:2172550 - symbol:AT5G57750 species:3702 "Arabi... 158 1.3e-11 1
UNIPROTKB|Q7XLY8 - symbol:LOC_Os04g50100 "E3 ubiquitin-pr... 164 1.5e-11 1
TAIR|locus:2123558 - symbol:AT4G28890 species:3702 "Arabi... 165 1.5e-11 1
TAIR|locus:2156867 - symbol:AT5G66070 species:3702 "Arabi... 157 1.7e-11 1
TAIR|locus:2097890 - symbol:AT3G48030 "AT3G48030" species... 161 2.5e-11 1
TAIR|locus:2141005 - symbol:AT4G17920 species:3702 "Arabi... 157 3.9e-11 1
TAIR|locus:2053791 - symbol:AT2G42360 species:3702 "Arabi... 153 4.5e-11 1
TAIR|locus:2117622 - symbol:RHA3B "RING-H2 finger A3B" sp... 153 4.5e-11 1
TAIR|locus:4515102621 - symbol:ATL1F species:3702 "Arabid... 157 6.1e-11 1
UNIPROTKB|A5PKC6 - symbol:RNF12 "Uncharacterized protein"... 161 8.0e-11 1
TAIR|locus:2010489 - symbol:AT1G28040 species:3702 "Arabi... 154 9.6e-11 1
TAIR|locus:2122358 - symbol:AT4G09110 species:3702 "Arabi... 154 9.9e-11 1
TAIR|locus:2173772 - symbol:AT5G40250 species:3702 "Arabi... 156 1.1e-10 1
TAIR|locus:2169399 - symbol:AT5G07040 species:3702 "Arabi... 147 2.0e-10 1
TAIR|locus:2053863 - symbol:RHA3A "RING-H2 finger A3A" sp... 146 2.5e-10 1
TAIR|locus:2169063 - symbol:AT5G47610 species:3702 "Arabi... 146 2.5e-10 1
TAIR|locus:2040085 - symbol:AT2G25410 species:3702 "Arabi... 152 2.9e-10 1
TAIR|locus:2176436 - symbol:AT5G43420 species:3702 "Arabi... 151 3.8e-10 1
TAIR|locus:2039170 - symbol:AT2G35910 species:3702 "Arabi... 144 4.1e-10 1
TAIR|locus:2161058 - symbol:ATCRT1 species:3702 "Arabidop... 138 4.2e-10 2
TAIR|locus:2081740 - symbol:ATL5 "AtL5" species:3702 "Ara... 146 4.4e-10 1
TAIR|locus:2094108 - symbol:DNF "DAY NEUTRAL FLOWERING" s... 143 5.2e-10 1
TAIR|locus:2035843 - symbol:AT1G14200 species:3702 "Arabi... 143 5.2e-10 1
UNIPROTKB|C9IY58 - symbol:RNF13 "E3 ubiquitin-protein lig... 143 5.9e-10 1
UNIPROTKB|Q8H7N9 - symbol:LOC_Os03g08920 "E3 ubiquitin-pr... 133 5.9e-10 2
UNIPROTKB|C9JCY0 - symbol:RNF13 "E3 ubiquitin-protein lig... 143 6.1e-10 1
TAIR|locus:4010713762 - symbol:AT3G20395 species:3702 "Ar... 142 6.6e-10 1
TAIR|locus:2125652 - symbol:AT4G32600 species:3702 "Arabi... 138 6.8e-10 2
TAIR|locus:2081907 - symbol:ATL4 "TOXICOS EN LEVADURA 4" ... 147 7.8e-10 1
TAIR|locus:2074678 - symbol:AT3G11110 species:3702 "Arabi... 141 8.4e-10 1
UNIPROTKB|B3KR12 - symbol:RNF13 "cDNA FLJ33452 fis, clone... 143 1.1e-09 1
TAIR|locus:2178515 - symbol:AT5G46650 species:3702 "Arabi... 144 1.1e-09 1
UNIPROTKB|I3LB70 - symbol:LOC100738472 "Uncharacterized p... 137 1.1e-09 2
UNIPROTKB|F1NUJ3 - symbol:RNF13 "E3 ubiquitin-protein lig... 143 1.2e-09 1
UNIPROTKB|E1BBI7 - symbol:RLIM "Uncharacterized protein" ... 137 1.3e-09 2
TAIR|locus:2118651 - symbol:AT4G30370 species:3702 "Arabi... 139 1.4e-09 1
UNIPROTKB|F1RPK6 - symbol:LOC100738472 "Uncharacterized p... 137 1.4e-09 2
TAIR|locus:2057861 - symbol:AT2G27940 species:3702 "Arabi... 140 1.5e-09 1
FB|FBgn0037705 - symbol:mura "murashka" species:7227 "Dro... 152 1.7e-09 1
UNIPROTKB|Q3SZS9 - symbol:RNF38 "Uncharacterized protein"... 146 1.7e-09 1
UNIPROTKB|F1PLL1 - symbol:RNF38 "Uncharacterized protein"... 146 1.7e-09 1
TAIR|locus:2062892 - symbol:AT2G46160 species:3702 "Arabi... 138 1.8e-09 1
UNIPROTKB|B1AM81 - symbol:RNF38 "RING finger protein 38" ... 146 1.8e-09 1
UNIPROTKB|F1RFD1 - symbol:RNF215 "Uncharacterized protein... 117 1.9e-09 2
UNIPROTKB|F1NND0 - symbol:RNF38 "Uncharacterized protein"... 146 2.0e-09 1
TAIR|locus:1009023242 - symbol:AT3G60966 "AT3G60966" spec... 137 2.2e-09 1
WB|WBGene00007226 - symbol:C01G6.4 species:6239 "Caenorha... 137 2.2e-09 1
UNIPROTKB|Q5XIX1 - symbol:Rnf38 "Rnf38 protein" species:1... 145 2.2e-09 1
TAIR|locus:2178788 - symbol:ATL63 "TOXICOS EN LEVADURA 63... 142 2.3e-09 1
RGD|1310738 - symbol:Rnf215 "ring finger protein 215" spe... 123 2.3e-09 2
UNIPROTKB|Q9H0F5 - symbol:RNF38 "RING finger protein 38" ... 146 2.4e-09 1
UNIPROTKB|F1ST85 - symbol:RNF38 "Uncharacterized protein"... 146 2.4e-09 1
ZFIN|ZDB-GENE-060929-604 - symbol:rnf44 "ring finger prot... 145 2.4e-09 1
UNIPROTKB|B4DYE0 - symbol:RNF44 "cDNA FLJ61466, highly si... 143 2.4e-09 1
WARNING: Descriptions of 507 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2165735 [details] [associations]
symbol:AT5G42200 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 EMBL:AB017067
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
HOGENOM:HOG000237642 EMBL:DQ086857 EMBL:BT003837 EMBL:BT005191
EMBL:AY088186 IPI:IPI00527533 RefSeq:NP_199035.1 UniGene:At.43326
UniGene:At.75664 ProteinModelPortal:Q8L9W3 SMR:Q8L9W3
EnsemblPlants:AT5G42200.1 GeneID:834225 KEGG:ath:AT5G42200
TAIR:At5g42200 eggNOG:NOG261446 InParanoid:Q8L9W3 OMA:LVPGCNH
PhylomeDB:Q8L9W3 ProtClustDB:CLSN2686448 Genevestigator:Q8L9W3
GermOnline:AT5G42200 Uniprot:Q8L9W3
Length = 163
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 71/136 (52%), Positives = 93/136 (68%)
Query: 1 MIVSVILALFLPCAGMSLVFIVYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELDKL 60
MI +V +AL LPC GM +VF++YL LLWC++ PVK GLS EL+K+
Sbjct: 28 MIATVFMALLLPCVGMCIVFLIYLFLLWCSTRRRIERLRFAEPVKPVTGKGLSVLELEKI 87
Query: 61 PKISGKELVM---GTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRA 117
PK++G+EL + TECAVCL+++ES Q RLVPGCNHGFH CAD+WLS H+VCPVCRA
Sbjct: 88 PKLTGRELAVIARSTECAVCLEDIESGQSTRLVPGCNHGFHQLCADTWLSNHTVCPVCRA 147
Query: 118 KLDSHFFNALESDNPC 133
+L + E+ +PC
Sbjct: 148 ELAPNLPQCNENQSPC 163
>TAIR|locus:2181032 [details] [associations]
symbol:DAFL2 "DAF-Like gene 2" species:3702 "Arabidopsis
thaliana" [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
HOGENOM:HOG000237642 EMBL:AL162351 EMBL:BT010682 EMBL:BT010973
IPI:IPI00526186 PIR:T48209 RefSeq:NP_195808.1 UniGene:At.33488
UniGene:At.70718 ProteinModelPortal:Q9LZV8 SMR:Q9LZV8
EnsemblPlants:AT5G01880.1 GeneID:831691 KEGG:ath:AT5G01880
TAIR:At5g01880 InParanoid:Q9LZV8 OMA:ATECAIC PhylomeDB:Q9LZV8
ProtClustDB:CLSN2916663 Genevestigator:Q9LZV8 GermOnline:AT5G01880
Uniprot:Q9LZV8
Length = 159
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 46/119 (38%), Positives = 58/119 (48%)
Query: 5 VILALFLPCAGMSLVFIVYL-SLLWCASNDNDNNGDVRLPVKAAAEGGLSASELDKLPKI 63
+ILA L CA L+ + L S+L CA A GL EL K P
Sbjct: 36 IILAALL-CA---LILALGLNSILRCAMRCGFGLSSSAAAGTVADRAGLKKRELKKFPVA 91
Query: 64 ---SGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
SG+ + TECA+CL E + R++P CNH FH+ C D+WL HS CP CR L
Sbjct: 92 EYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSL 150
>TAIR|locus:2122378 [details] [associations]
symbol:AT4G09130 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC005359 HOGENOM:HOG000239182 EMBL:AL161514
ProtClustDB:CLSN2685392 IPI:IPI00538403 PIR:E85092
RefSeq:NP_192652.1 UniGene:At.54226 ProteinModelPortal:Q9M0R4
SMR:Q9M0R4 EnsemblPlants:AT4G09130.1 GeneID:826491
KEGG:ath:AT4G09130 TAIR:At4g09130 eggNOG:NOG245216
InParanoid:Q9M0R4 OMA:HIALPRA PhylomeDB:Q9M0R4
Genevestigator:Q9M0R4 GermOnline:AT4G09130 Uniprot:Q9M0R4
Length = 357
Score = 193 (73.0 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 44/121 (36%), Positives = 59/121 (48%)
Query: 5 VILALFLPCAGMSLVFIVYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELDKLPKIS 64
V+L+LFL L+ +VY C +N+ G L + G+ ++ P
Sbjct: 53 VLLSLFL------LLLVVYCLNYGCCIEENETGGHEVL--HSRVRRGIDKDVIESFPAFL 104
Query: 65 GKELVM------GTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAK 118
E+ G ECA+CL E E E+P R +P C+H FH C D WLS S CPVCRA
Sbjct: 105 YSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDEWLSSRSTCPVCRAN 164
Query: 119 L 119
L
Sbjct: 165 L 165
>TAIR|locus:2028436 [details] [associations]
symbol:AT1G49230 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
EMBL:AC016041 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
PIR:G96528 HOGENOM:HOG000237642 ProtClustDB:CLSN2682468
EMBL:BT010489 EMBL:AK176235 EMBL:AK176512 IPI:IPI00522198
RefSeq:NP_175349.1 UniGene:At.43788 ProteinModelPortal:Q6NQG7
SMR:Q6NQG7 EnsemblPlants:AT1G49230.1 GeneID:841346
KEGG:ath:AT1G49230 TAIR:At1g49230 InParanoid:Q6NQG7 OMA:NTGVKRK
PhylomeDB:Q6NQG7 Genevestigator:Q6NQG7 GermOnline:AT1G49230
Uniprot:Q6NQG7
Length = 219
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 45/120 (37%), Positives = 66/120 (55%)
Query: 1 MIVSVILALFLPCAGMSLVFIVYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELDKL 60
M++SV+L L C+ + L I+ +L C++ G PV+ G+ L
Sbjct: 58 MVLSVLLCA-LVCS-LGLNSIIRCALR-CSNLVPSEAGGDNYPVRLT-NTGVKRKALKSF 113
Query: 61 PKIS-GKELVM-G--TECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCR 116
+S EL + G TECA+CL E +E+ +L+P C+HGFH++C D WLS HS CP CR
Sbjct: 114 QTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCR 173
>TAIR|locus:2090980 [details] [associations]
symbol:AT3G14320 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AB022220 IPI:IPI00542849
RefSeq:NP_188049.1 UniGene:At.65086 ProteinModelPortal:Q9LUL6
SMR:Q9LUL6 EnsemblPlants:AT3G14320.1 GeneID:820652
KEGG:ath:AT3G14320 TAIR:At3g14320 eggNOG:NOG324121
HOGENOM:HOG000034170 InParanoid:Q9LUL6 OMA:SNSTCPI PhylomeDB:Q9LUL6
ProtClustDB:CLSN2915567 Genevestigator:Q9LUL6 GermOnline:AT3G14320
Uniprot:Q9LUL6
Length = 204
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 37/122 (30%), Positives = 64/122 (52%)
Query: 3 VSVILALFLPCAGMSLVFIVYLSLLWCA---SNDNDNNGDVRLPVKAAAEGGLSASELDK 59
++++ A F G+S V + + + +D+DNN D + + G+ L
Sbjct: 14 INIVFAFFF--FGISAVVVSCIIKCYNTHDDDHDHDNNNDGHVSITIKERVGIKPYVLRS 71
Query: 60 LPKI--SGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRA 117
+P + + K+ EC VCL E+ AR++P C+H FH++C DSWL +S CP+CR
Sbjct: 72 IPIVDFNTKDFKYVLECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICRK 131
Query: 118 KL 119
++
Sbjct: 132 RV 133
>TAIR|locus:2140069 [details] [associations]
symbol:AT4G40070 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL161596 eggNOG:COG5540 EMBL:AL035708 HOGENOM:HOG000239182
EMBL:AF419600 EMBL:BT000540 IPI:IPI00542846 PIR:H85474 PIR:T06113
RefSeq:NP_568080.2 UniGene:At.27385 ProteinModelPortal:Q8W571
SMR:Q8W571 PRIDE:Q8W571 EnsemblPlants:AT4G40070.1 GeneID:830170
KEGG:ath:AT4G40070 TAIR:At4g40070 OMA:CRSGEES PhylomeDB:Q8W571
ProtClustDB:CLSN2918858 Genevestigator:Q8W571 GermOnline:AT4G40070
Uniprot:Q8W571
Length = 323
Score = 188 (71.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 44/127 (34%), Positives = 71/127 (55%)
Query: 2 IVSVILALFLPCAGMSLVFIVYLSLLWCASNDNDNNGDV---RLPVKAAAEGGLSASELD 58
+ +V++ LF G+ V+I + CA ++ D++ R ++ GGL + ++
Sbjct: 49 VFAVLVTLFF-LTGLLSVYIRH-----CARSNPDSSTRYFRNRANDGSSRRGGLDNAVVE 102
Query: 59 KLPKI---SGKELVMGT---ECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVC 112
P S KE +G+ ECA+CL+E+E + RL+P CNH FH+ C D+WL H+ C
Sbjct: 103 SFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATC 162
Query: 113 PVCRAKL 119
PVCR+ L
Sbjct: 163 PVCRSNL 169
>TAIR|locus:2011686 [details] [associations]
symbol:ATL8 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0010014 "meristem
initiation" evidence=RCA] [GO:0010075 "regulation of meristem
growth" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC012394 eggNOG:COG5540 HOGENOM:HOG000237642
ProtClustDB:CLSN2679434 EMBL:AC015450 EMBL:AK118893 EMBL:BT005559
EMBL:AY086760 IPI:IPI00519939 PIR:G96791 RefSeq:NP_177767.1
UniGene:At.34661 ProteinModelPortal:Q8LC69 SMR:Q8LC69 STRING:Q8LC69
EnsemblPlants:AT1G76410.1 GeneID:843974 KEGG:ath:AT1G76410
TAIR:At1g76410 InParanoid:Q8LC69 OMA:KLVECAI PhylomeDB:Q8LC69
Genevestigator:Q8LC69 GermOnline:AT1G76410 Uniprot:Q8LC69
Length = 185
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 45/121 (37%), Positives = 63/121 (52%)
Query: 5 VILALFLPCAGMSLVFIVYLS-LLWCASNDNDNNGD-VRLPVKAAAEGGLSASELDKLPK 62
+ILA+ L CA ++ ++ +S W + N D P AAA GL L LPK
Sbjct: 30 LILAVLL-CALTCIIGLIAVSRCAWLRRIASRNRSDQTHPPPVAAANKGLKKKVLRSLPK 88
Query: 63 IS-------GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVC 115
++ ++LV ECA+CL E + R++P C HGFH+ C D+WL HS CP C
Sbjct: 89 LTYSPDSPPAEKLV---ECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSC 145
Query: 116 R 116
R
Sbjct: 146 R 146
>TAIR|locus:2124700 [details] [associations]
symbol:AT4G10160 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 eggNOG:NOG302028
HOGENOM:HOG000006232 ProtClustDB:CLSN2685663 EMBL:DQ059118
EMBL:AF096373 EMBL:AL049487 EMBL:AL161516 EMBL:AY122915
IPI:IPI00532160 PIR:T04066 RefSeq:NP_192754.1 UniGene:At.33649
ProteinModelPortal:Q9SN27 SMR:Q9SN27 IntAct:Q9SN27
EnsemblPlants:AT4G10160.1 GeneID:826607 KEGG:ath:AT4G10160
TAIR:At4g10160 InParanoid:Q9SN27 PhylomeDB:Q9SN27
Genevestigator:Q9SN27 Uniprot:Q9SN27
Length = 225
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 42/119 (35%), Positives = 62/119 (52%)
Query: 10 FLPCAGMSLVFIVYLSLLWCASNDNDNNGDVRL----PVK---AAAEGGLSASELDKLPK 62
F+ C + ++ IV L L N N N L P + AE GLS + LP
Sbjct: 24 FIVCVPICVILIVLLVLYIMRRNSNTNVDWSSLGGFVPTNNNLSTAELGLSKDIREMLPI 83
Query: 63 ISGKE--LVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
+ KE V T+C+VCL + ++E+ + +P C H FH++C D WL+ H+ CP+CR L
Sbjct: 84 VIYKESFTVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSL 142
>TAIR|locus:2096444 [details] [associations]
symbol:AT3G03550 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0080167 "response to karrikin" evidence=IEP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0080167
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
EMBL:AC009327 EMBL:AC009895 EMBL:BT006433 EMBL:AY085462
IPI:IPI00548868 RefSeq:NP_566208.1 UniGene:At.44888
ProteinModelPortal:Q9SRQ8 SMR:Q9SRQ8 PRIDE:Q9SRQ8
EnsemblPlants:AT3G03550.1 GeneID:821237 KEGG:ath:AT3G03550
TAIR:At3g03550 HOGENOM:HOG000239376 InParanoid:Q9SRQ8 OMA:YCHRRRH
PhylomeDB:Q9SRQ8 ProtClustDB:CLSN2686341 Genevestigator:Q9SRQ8
GermOnline:AT3G03550 Uniprot:Q9SRQ8
Length = 356
Score = 187 (70.9 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 36/96 (37%), Positives = 54/96 (56%)
Query: 28 WCASNDNDNNGDVRLPVKAAAEGG---LSASELDKLPKISGKEL---VMGTECAVCLDEV 81
W +N+N+NNG P + GG L S + + +++ V ++C+VCL E
Sbjct: 108 WQGTNNNNNNGATN-PNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEF 166
Query: 82 ESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRA 117
+ + RL+P CNH FH+ C D+WL HS CP+CRA
Sbjct: 167 QENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRA 202
>TAIR|locus:2142449 [details] [associations]
symbol:RING1 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0002238 "response to molecule of fungal origin"
evidence=IEP] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP;RCA] [GO:0012501
"programmed cell death" evidence=IC] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0043068 "positive regulation of
programmed cell death" evidence=IMP] [GO:0051865 "protein
autoubiquitination" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009867
"jasmonic acid mediated signaling pathway" evidence=RCA]
[GO:0010310 "regulation of hydrogen peroxide metabolic process"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0019761 "glucosinolate biosynthetic
process" evidence=RCA] [GO:0031348 "negative regulation of defense
response" evidence=RCA] [GO:0034976 "response to endoplasmic
reticulum stress" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0006915 GO:GO:0009617 GO:GO:0006952 GO:GO:0046872
GO:GO:0008270 GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL353995 eggNOG:COG5540 GO:GO:0004842 GO:GO:0051865
EMBL:AK176500 IPI:IPI00537935 PIR:T50001 RefSeq:NP_196600.1
UniGene:At.1824 ProteinModelPortal:Q9LX93 SMR:Q9LX93 STRING:Q9LX93
EnsemblPlants:AT5G10380.1 GeneID:830902 KEGG:ath:AT5G10380
TAIR:At5g10380 HOGENOM:HOG000034176 InParanoid:Q9LX93 OMA:LHRSAIN
PhylomeDB:Q9LX93 ProtClustDB:CLSN2914912 Genevestigator:Q9LX93
GermOnline:AT5G10380 GO:GO:0043068 GO:GO:0012501 GO:GO:0002238
Uniprot:Q9LX93
Length = 301
Score = 184 (69.8 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 51 GLSASELDKLPKIS---GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL S ++ + + G+ ++ GTEC+VCL+E E ++ RL+P C+H FHL C D+WL
Sbjct: 109 GLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLL 168
Query: 108 KHSVCPVCRA 117
H CP+CRA
Sbjct: 169 SHKNCPLCRA 178
>TAIR|locus:2825708 [details] [associations]
symbol:AT1G20823 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006952 GO:GO:0046872
GO:GO:0008270 EMBL:AC069251 GO:GO:0016567 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
HOGENOM:HOG000237642 EMBL:AY045849 IPI:IPI00544827 PIR:F86340
RefSeq:NP_173506.1 UniGene:At.15492 ProteinModelPortal:Q9LM69
SMR:Q9LM69 STRING:Q9LM69 PRIDE:Q9LM69 ProMEX:Q9LM69
EnsemblPlants:AT1G20823.1 GeneID:838674 KEGG:ath:AT1G20823
TAIR:At1g20823 InParanoid:Q9LM69 OMA:EIRIKQG PhylomeDB:Q9LM69
ProtClustDB:CLSN2679434 Genevestigator:Q9LM69 GermOnline:AT1G20823
Uniprot:Q9LM69
Length = 197
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 45/123 (36%), Positives = 62/123 (50%)
Query: 5 VILALFLPCAGMSLVFIVYLS-LLW----CASNDNDNNGDVRLPVK--AAAEGGLSASEL 57
VILA L CA + ++ ++ +S +W A N + + P AAA GL L
Sbjct: 32 VILAALL-CALICVLGLIAVSRCVWLRRLAAGNRTVSGSQTQSPQPPVAAANKGLKKKVL 90
Query: 58 DKLPKIS----GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCP 113
LPK++ E ECA+CL E + R++P C HGFH+ C D+WL HS CP
Sbjct: 91 QSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCP 150
Query: 114 VCR 116
CR
Sbjct: 151 SCR 153
>TAIR|locus:2206722 [details] [associations]
symbol:AT1G35330 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC069160 HOGENOM:HOG000239182 IPI:IPI00547066 PIR:D86474
RefSeq:NP_174766.1 UniGene:At.51949 ProteinModelPortal:Q9C7I1
SMR:Q9C7I1 EnsemblPlants:AT1G35330.1 GeneID:840422
KEGG:ath:AT1G35330 TAIR:At1g35330 eggNOG:NOG282652
InParanoid:Q9C7I1 OMA:SNWRITE PhylomeDB:Q9C7I1
ProtClustDB:CLSN2914356 Genevestigator:Q9C7I1 GermOnline:AT1G35330
Uniprot:Q9C7I1
Length = 327
Score = 185 (70.2 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 36/95 (37%), Positives = 50/95 (52%)
Query: 31 SNDNDNNGDVRLPVKAAAEGGLSASELDKLP-----KISGKELVMG-TECAVCLDEVESE 84
S+D + G + GL ++ P ++ G ++ G ECA+CL+E E E
Sbjct: 79 SSDTEEGGHGEVAFTRRTSRGLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDE 138
Query: 85 QPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
+ RL+P C+H FH C D WLS S CPVCRA L
Sbjct: 139 ETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASL 173
>TAIR|locus:2053776 [details] [associations]
symbol:AT2G42350 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC005956
EMBL:BT010853 EMBL:BT011323 IPI:IPI00542284 PIR:H84852
RefSeq:NP_181764.1 UniGene:At.42716 ProteinModelPortal:Q9SLC4
SMR:Q9SLC4 EnsemblPlants:AT2G42350.1 GeneID:818836
KEGG:ath:AT2G42350 TAIR:At2g42350 eggNOG:NOG298426
HOGENOM:HOG000034168 InParanoid:Q9SLC4 OMA:VAGTECA PhylomeDB:Q9SLC4
ProtClustDB:CLSN2683918 Genevestigator:Q9SLC4 GermOnline:AT2G42350
Uniprot:Q9SLC4
Length = 217
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 35/75 (46%), Positives = 47/75 (62%)
Query: 51 GLSASELDKLPK-ISG-KELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSK 108
GL + + LP + G K V GTECAVCL +E + AR++P C H FH+ C D+WL+
Sbjct: 75 GLDSLVIASLPTFVVGIKNDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTT 134
Query: 109 HSVCPVCRAKLD-SH 122
S CPVCR + + SH
Sbjct: 135 QSTCPVCRTEAEPSH 149
>TAIR|locus:2153554 [details] [associations]
symbol:DAF "DEFECTIVE IN ANTHER DEHISCENCE1- ( DAD1-)
Activating Factor" species:3702 "Arabidopsis thaliana" [GO:0008270
"zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
HOGENOM:HOG000237642 ProtClustDB:CLSN2913382 EMBL:AB010692
EMBL:BX830198 IPI:IPI00517240 RefSeq:NP_196147.1 UniGene:At.49733
ProteinModelPortal:Q9FLC6 SMR:Q9FLC6 EnsemblPlants:AT5G05280.1
GeneID:830410 KEGG:ath:AT5G05280 TAIR:At5g05280 InParanoid:Q9FLC6
OMA:KMKATEC PhylomeDB:Q9FLC6 Genevestigator:Q9FLC6
GermOnline:AT5G05280 Uniprot:Q9FLC6
Length = 176
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 49/123 (39%), Positives = 61/123 (49%)
Query: 5 VILALFLPCAGMSLVFI--VYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELDKLPK 62
+ILA L CA + + I V +L C N V A G+ L +P
Sbjct: 43 IILAALL-CALICALGINSVLRCVLRCTRRFTPNEDPVDTNANVAK--GIKKRALKVIPV 99
Query: 63 IS-GKELVM-GTECAVCL-DEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
S EL M TEC +CL D VE E R++P CNHGFH++C D+WL HS CP CR L
Sbjct: 100 DSYSPELKMKATECLICLGDFVEGET-VRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSL 158
Query: 120 DSH 122
H
Sbjct: 159 LEH 161
>TAIR|locus:2103162 [details] [associations]
symbol:DAFL1 "DAF-Like gene 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
EMBL:AC011708 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237642 EMBL:BT004771 EMBL:AK227982 IPI:IPI00541327
RefSeq:NP_187702.1 UniGene:At.27986 ProteinModelPortal:Q9SG96
SMR:Q9SG96 EnsemblPlants:AT3G10910.1 GeneID:820261
KEGG:ath:AT3G10910 TAIR:At3g10910 eggNOG:NOG288147
InParanoid:Q9SG96 OMA:EPQANAP PhylomeDB:Q9SG96
ProtClustDB:CLSN2913382 Genevestigator:Q9SG96 GermOnline:AT3G10910
Uniprot:Q9SG96
Length = 181
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 39/93 (41%), Positives = 52/93 (55%)
Query: 30 ASNDNDNNGDVRLPVKAAAEGGLSASELDKLPK-ISGKELV--MGTECAVCLDEVESEQP 86
ASN N N G RL AA GL L ++P + G ++ TEC +CL + E +
Sbjct: 73 ASNANANLG--RL----AAATGLKKQALKQIPVGLYGSGIIDMKATECLICLGDFEDGEK 126
Query: 87 ARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
R++P CNHGFH++C D+WL S CP CR L
Sbjct: 127 VRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSL 159
>TAIR|locus:2151421 [details] [associations]
symbol:AT5G17600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
HOGENOM:HOG000239376 ProtClustDB:CLSN2686341 EMBL:AL391151
EMBL:AK226188 IPI:IPI00533562 PIR:T51464 RefSeq:NP_197262.1
UniGene:At.28195 ProteinModelPortal:Q9LF64 SMR:Q9LF64
EnsemblPlants:AT5G17600.1 GeneID:831626 KEGG:ath:AT5G17600
TAIR:At5g17600 InParanoid:Q9LF64 OMA:TEANQRS PhylomeDB:Q9LF64
Genevestigator:Q9LF64 GermOnline:AT5G17600 Uniprot:Q9LF64
Length = 362
Score = 182 (69.1 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 30/54 (55%), Positives = 37/54 (68%)
Query: 64 SGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRA 117
SG V G++C+VCL E E + RL+P CNH FHL C D+WL HS CP+CRA
Sbjct: 132 SGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRA 185
>TAIR|locus:2193992 [details] [associations]
symbol:ATL3 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
EMBL:AC067754 EMBL:AF132013 EMBL:AC016529 EMBL:BT010140
IPI:IPI00529429 PIR:H96746 RefSeq:NP_177375.1 UniGene:At.11694
UniGene:At.71796 ProteinModelPortal:Q9XF63 SMR:Q9XF63
EnsemblPlants:AT1G72310.1 GeneID:843563 KEGG:ath:AT1G72310
GeneFarm:4970 TAIR:At1g72310 HOGENOM:HOG000034162 InParanoid:Q9XF63
OMA:YAKRYLG PhylomeDB:Q9XF63 ProtClustDB:CLSN2715378
Genevestigator:Q9XF63 GermOnline:AT1G72310 Uniprot:Q9XF63
Length = 324
Score = 179 (68.1 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 46 AAAEGGLSASELDKLPKISGKE--LVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCAD 103
A + GL++ EL LP + ++ G EC++CL E+ ARL+P CNH FH++C D
Sbjct: 97 ALSNTGLTSFELSSLPIVFFRQDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECID 156
Query: 104 SWLSKHSVCPVCR 116
W HS CP+CR
Sbjct: 157 MWFQSHSTCPICR 169
>TAIR|locus:2124695 [details] [associations]
symbol:AT4G10150 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG238959
HOGENOM:HOG000006232 ProtClustDB:CLSN2685663 EMBL:AF096373
EMBL:AL049487 EMBL:AL161516 EMBL:AY122914 IPI:IPI00517691
PIR:T04065 RefSeq:NP_192753.1 UniGene:At.33650
ProteinModelPortal:Q9SN28 SMR:Q9SN28 EnsemblPlants:AT4G10150.1
GeneID:826606 KEGG:ath:AT4G10150 TAIR:At4g10150 InParanoid:Q9SN28
OMA:ICFTFIV PhylomeDB:Q9SN28 Genevestigator:Q9SN28
GermOnline:AT4G10150 Uniprot:Q9SN28
Length = 236
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 38/118 (32%), Positives = 63/118 (53%)
Query: 13 CAGMSLVFIVYLSLLWCASNDNDN------NGDVRLPVK---AAAEGGLSASELDKLPKI 63
C ++F++Y+ L S N + G +P + AE GLS + LP +
Sbjct: 39 CFTFIVLFVLYVIYLRRNSTTNVDWSSLGMRGGTFVPTNNNLSTAELGLSKDIREMLPVV 98
Query: 64 SGKE--LVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
KE +V ++C+VCL + ++E+ + +P C H FH++C D WL+ H+ CP+CR L
Sbjct: 99 IYKESFIVKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSL 156
>TAIR|locus:2096309 [details] [associations]
symbol:ATL6 "Arabidopsis toxicos en levadura 6"
species:3702 "Arabidopsis thaliana" [GO:0005576 "extracellular
region" evidence=ISM] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0010200 "response to
chitin" evidence=IEP;RCA] [GO:0009814 "defense response,
incompatible interaction" evidence=IEP] [GO:0009816 "defense
response to bacterium, incompatible interaction" evidence=IMP]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
GO:GO:0005886 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0009816 eggNOG:COG5540 GO:GO:0004842 HOGENOM:HOG000239182
ProtClustDB:CLSN2687102 EMBL:AF132016 EMBL:DQ086860 EMBL:AC009177
EMBL:AY080617 IPI:IPI00538071 RefSeq:NP_566249.1 UniGene:At.22987
ProteinModelPortal:Q8RXX9 SMR:Q8RXX9 STRING:Q8RXX9 PRIDE:Q8RXX9
EnsemblPlants:AT3G05200.1 GeneID:819684 KEGG:ath:AT3G05200
GeneFarm:4974 TAIR:At3g05200 InParanoid:Q8RXX9 OMA:IYVRHCY
PhylomeDB:Q8RXX9 Genevestigator:Q8RXX9 GermOnline:AT3G05200
Uniprot:Q8RXX9
Length = 398
Score = 181 (68.8 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 45/125 (36%), Positives = 64/125 (51%)
Query: 1 MIVSVILALFLPCAGMSLVFIVYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELDKL 60
++V +I ALF G ++ + S + A R V AAA G L S ++
Sbjct: 52 IVVILIAALFF--MGFFSIYFRHCSGVPDAGVSPAGGARSRATVNAAARG-LDVSVVETF 108
Query: 61 PK-----ISGKELVMGT-ECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPV 114
P + ++L G ECA+CL+E E ++ RL+P C+H FH C D+WL H CPV
Sbjct: 109 PTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPV 168
Query: 115 CRAKL 119
CRA L
Sbjct: 169 CRANL 173
>TAIR|locus:505006547 [details] [associations]
symbol:AT4G33565 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005886 EMBL:CP002687 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 IPI:IPI00524769
RefSeq:NP_567926.4 UniGene:At.31572 UniGene:At.75651
ProteinModelPortal:F4JJ02 SMR:F4JJ02 EnsemblPlants:AT4G33565.1
GeneID:829496 KEGG:ath:AT4G33565 OMA:WHIRTIG Uniprot:F4JJ02
Length = 367
Score = 180 (68.4 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 31/62 (50%), Positives = 43/62 (69%)
Query: 59 KLPKISGKE-LVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRA 117
K+ + S K+ +V GT+C+VCL E E E+ RL+P C H FHL C D+WL H+ CP+CRA
Sbjct: 201 KVCQYSKKDGVVEGTDCSVCLSEFEEEETLRLLPKCKHAFHLYCIDTWLRSHTNCPLCRA 260
Query: 118 KL 119
+
Sbjct: 261 PI 262
>TAIR|locus:4515103413 [details] [associations]
symbol:ATL4H species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
EMBL:AL161547 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL021889 eggNOG:COG5540 HOGENOM:HOG000239376 IPI:IPI00537985
PIR:T05077 RefSeq:NP_001119003.1 UniGene:At.74353
ProteinModelPortal:P0C041 SMR:P0C041 EnsemblPlants:AT4G17905.1
GeneID:6241286 KEGG:ath:AT4G17905 TAIR:At4g17905 PhylomeDB:P0C041
Genevestigator:P0C041 Uniprot:P0C041
Length = 310
Score = 176 (67.0 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 59 KLPKISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAK 118
KL K + GT+C++CL E ++ RL+P CNH FH+ C D WL HS CP+CRAK
Sbjct: 140 KLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAK 199
Query: 119 L 119
+
Sbjct: 200 I 200
>TAIR|locus:2207066 [details] [associations]
symbol:AT1G72220 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
EMBL:AC067754 EMBL:AY052232 EMBL:BT002303 EMBL:AY084564
IPI:IPI00537254 PIR:G96745 RefSeq:NP_177367.1 UniGene:At.26428
ProteinModelPortal:Q8LFY8 SMR:Q8LFY8 EnsemblPlants:AT1G72220.1
GeneID:843554 KEGG:ath:AT1G72220 TAIR:At1g72220
HOGENOM:HOG000034163 InParanoid:Q8LFY8 OMA:INSITIC PhylomeDB:Q8LFY8
ProtClustDB:CLSN2912699 Genevestigator:Q8LFY8 GermOnline:AT1G72220
Uniprot:Q8LFY8
Length = 413
Score = 179 (68.1 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 65 GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRA 117
G L+ T+C VCL+E E ++ RL+P CNH FH+ C D+WLS H+ CP+CRA
Sbjct: 168 GDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRA 220
>TAIR|locus:2044757 [details] [associations]
symbol:ATL9 "Arabidopsis toxicos en levadura 9"
species:3702 "Arabidopsis thaliana" [GO:0005576 "extracellular
region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0050832 "defense
response to fungus" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0050832
GO:GO:0046872 GO:GO:0008270 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 HOGENOM:HOG000239182 EMBL:AC004238
EMBL:DQ059110 EMBL:BT015733 EMBL:BT020192 EMBL:AK228813
IPI:IPI00523599 PIR:T00481 RefSeq:NP_181045.1 UniGene:At.37726
ProteinModelPortal:O64763 SMR:O64763 EnsemblPlants:AT2G35000.1
GeneID:818064 KEGG:ath:AT2G35000 TAIR:At2g35000 eggNOG:NOG282867
InParanoid:O64763 PhylomeDB:O64763 ProtClustDB:CLSN2913188
Genevestigator:O64763 Uniprot:O64763
Length = 378
Score = 178 (67.7 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 38/95 (40%), Positives = 49/95 (51%)
Query: 31 SNDNDNNGDVRLPVKAAAEGGLSASELDKLPKISGKELVM------GTECAVCLDEVESE 84
S D D V + ++ GL A ++ P E+ G ECAVCL E E +
Sbjct: 87 STDADAESQV-VRIRRLTARGLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDD 145
Query: 85 QPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
+ RL+P C H FH C D WLS+HS CP+CRA L
Sbjct: 146 ETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRADL 180
>TAIR|locus:2054049 [details] [associations]
symbol:MEE16 "maternal effect embryo arrest 16"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0009793 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000239562 ProtClustDB:CLSN2683052 EMBL:AC005724
IPI:IPI00529404 PIR:H84566 RefSeq:NP_179455.1 UniGene:At.66220
ProteinModelPortal:Q9ZV53 SMR:Q9ZV53 EnsemblPlants:AT2G18650.1
GeneID:816380 KEGG:ath:AT2G18650 TAIR:At2g18650 eggNOG:NOG280728
InParanoid:Q9ZV53 OMA:KSVVERE PhylomeDB:Q9ZV53
Genevestigator:Q9ZV53 GermOnline:AT2G18650 Uniprot:Q9ZV53
Length = 423
Score = 179 (68.1 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 34/79 (43%), Positives = 47/79 (59%)
Query: 49 EGGLSASELDKLPKISGKELV----MGTECAVCLDEVESEQPARLVPGCNHGFHLQCADS 104
+ G+ S +D LP K +V +C VCL E E+E RL+P C+H FH++C D+
Sbjct: 97 DSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDT 156
Query: 105 WLSKHSVCPVCRAKLDSHF 123
WL HS CP+CR+ L S F
Sbjct: 157 WLLSHSTCPLCRSNLLSGF 175
>TAIR|locus:2118666 [details] [associations]
symbol:AT4G30400 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0080167 "response to karrikin" evidence=IEP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0080167
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
EMBL:AL161577 EMBL:AF160182 EMBL:AY054187 EMBL:AY103309
IPI:IPI00526302 PIR:E85355 RefSeq:NP_567846.1 UniGene:At.4566
ProteinModelPortal:Q940Q4 SMR:Q940Q4 PRIDE:Q940Q4
EnsemblPlants:AT4G30400.1 GeneID:829163 KEGG:ath:AT4G30400
TAIR:At4g30400 HOGENOM:HOG000239562 InParanoid:Q940Q4 OMA:NVVERES
PhylomeDB:Q940Q4 ProtClustDB:CLSN2683052 Genevestigator:Q940Q4
GermOnline:AT4G30400 Uniprot:Q940Q4
Length = 472
Score = 179 (68.1 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 41/130 (31%), Positives = 69/130 (53%)
Query: 1 MIVSVILALFLPCAGMSLVFIVYLSLLWCASNDNDNNGDVRLPVKAAAE-------GGLS 53
+++ +IL++ +G L+ ++ LL +S D ++ D ++ + G+
Sbjct: 52 LLIIIILSIIFFISG--LLHLLVRFLLTPSSRDREDYFDNVTALQGQLQQLFHLHDSGVD 109
Query: 54 ASELDKLPKISGKELV----MGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKH 109
S +D LP K ++ +CAVCL E E+E RL+P C+H FH+ C D+WL H
Sbjct: 110 QSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSH 169
Query: 110 SVCPVCRAKL 119
S CP+CR+ L
Sbjct: 170 STCPLCRSSL 179
>TAIR|locus:2007008 [details] [associations]
symbol:AT1G33480 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC051630
EMBL:AK220582 IPI:IPI00538312 PIR:F86458 RefSeq:NP_174614.2
UniGene:At.71262 ProteinModelPortal:Q570X5 SMR:Q570X5 PRIDE:Q570X5
EnsemblPlants:AT1G33480.1 GeneID:840242 KEGG:ath:AT1G33480
TAIR:At1g33480 eggNOG:NOG238959 HOGENOM:HOG000006232
InParanoid:Q570X5 PhylomeDB:Q570X5 ProtClustDB:CLSN2685663
Genevestigator:Q570X5 GermOnline:AT1G33480 Uniprot:Q570X5
Length = 261
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 38/113 (33%), Positives = 60/113 (53%)
Query: 13 CAGMSLVFIVYLSLLWCASNDNDNNG--DVRLPVKAAA--EGGLSASELDKLPKISGKE- 67
C ++F+ YL L +S+D + G +P + + E GLS + LP + KE
Sbjct: 33 CFTFIILFLFYLIYLRRSSSDLSSLGMRTTFIPGNSLSTIELGLSKELREMLPIVVFKES 92
Query: 68 -LVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
VM ++C+VCL + + + +P C H FH+ C D WL+ H+ CP+CR L
Sbjct: 93 FTVMDSQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTSHTTCPLCRLAL 145
>TAIR|locus:2830088 [details] [associations]
symbol:AT3G18773 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
eggNOG:COG5540 HOGENOM:HOG000237642 ProtClustDB:CLSN2682468
EMBL:AK222192 EMBL:BT025292 EMBL:AY086917 IPI:IPI00522673
RefSeq:NP_850610.1 UniGene:At.47029 ProteinModelPortal:Q9LS99
SMR:Q9LS99 EnsemblPlants:AT3G18773.1 GeneID:821409
KEGG:ath:AT3G18773 TAIR:At3g18773 InParanoid:Q9LS99 OMA:NYSPEIN
PhylomeDB:Q9LS99 Genevestigator:Q9LS99 Uniprot:Q9LS99
Length = 220
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 37/121 (30%), Positives = 65/121 (53%)
Query: 1 MIVSVILALFLPCAGMSLVFIVYLSLLWCAS-NDNDNNGDVRLPVKAAAEGGLSASELDK 59
M++S++L + C+ + L +I+ + + S +D P ++ G+ L
Sbjct: 54 MLLSILLCGII-CS-LGLHYIIRCAFIRSRSFMISDPISIPSTPRDSSVNKGIKKKALKM 111
Query: 60 LPKIS-GKELVM---GTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVC 115
LP ++ E+ + G EC +CL + + + R++P CNHGFHL+C D WL++H CP C
Sbjct: 112 LPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKC 171
Query: 116 R 116
R
Sbjct: 172 R 172
>UNIPROTKB|Q9LRB7 [details] [associations]
symbol:EL5.1 "E3 ubiquitin-protein ligase EL5"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0048364 "root development"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005886
GO:GO:0051301 GO:GO:0046872 GO:GO:0008270 GO:GO:0048364
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 eggNOG:NOG265447
EMBL:AB045120 EMBL:AP005883 EMBL:AK243670 RefSeq:NP_001047149.1
UniGene:Os.3710 PDB:1IYM PDBsum:1IYM ProteinModelPortal:Q9LRB7
SMR:Q9LRB7 STRING:Q9LRB7 EnsemblPlants:LOC_Os02g35329.1
GeneID:4329685 KEGG:dosa:Os02t0559800-01 KEGG:dosa:Os02t0560200-01
KEGG:dosa:Os02t0560600-01 KEGG:dosa:Os02t0561000-01
KEGG:dosa:Os02t0561400-01 KEGG:dosa:Os02t0561800-01
KEGG:dosa:Os02t0561900-00 KEGG:dosa:Os11t0649801-00
KEGG:osa:4329685 Gramene:Q9LRB7 HOGENOM:HOG000243710 KO:K16286
OMA:LWSFGRQ ProtClustDB:CLSN2692836 EvolutionaryTrace:Q9LRB7
Uniprot:Q9LRB7
Length = 325
Score = 174 (66.3 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 27/46 (58%), Positives = 32/46 (69%)
Query: 71 GTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCR 116
G ECAVCL E+E + AR +P C HGFH +C D WL HS CP+CR
Sbjct: 131 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCR 176
>TAIR|locus:2061698 [details] [associations]
symbol:AT2G20030 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0010043
"response to zinc ion" evidence=RCA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 EMBL:AC006081
IPI:IPI00548965 PIR:B84584 RefSeq:NP_179593.1 UniGene:At.52839
ProteinModelPortal:Q9SL78 SMR:Q9SL78 PaxDb:Q9SL78 PRIDE:Q9SL78
EnsemblPlants:AT2G20030.1 GeneID:816522 KEGG:ath:AT2G20030
TAIR:At2g20030 HOGENOM:HOG000034165 InParanoid:Q9SL78 OMA:REGNENI
PhylomeDB:Q9SL78 ProtClustDB:CLSN2683296 Genevestigator:Q9SL78
GermOnline:AT2G20030 Uniprot:Q9SL78
Length = 390
Score = 175 (66.7 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 42/133 (31%), Positives = 70/133 (52%)
Query: 3 VSVILALFLPCAGMSLVFIVYLSLLWCASND----NDNNGD-VR-------LPVKAAAEG 50
+++I +F ++ V +VY C ND D++G+ +R L +++
Sbjct: 41 LAIITGVFSIVFTLTFVLLVYAK---CFHNDLRSETDSDGERIRHDRLWQGLFNRSSRFS 97
Query: 51 GLSASELDKLP--KISG-KELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL ++ LP + S K L G EC+VCL + E + RL+P C H FH+ C D WL
Sbjct: 98 GLDKKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLE 157
Query: 108 KHSVCPVCRAKLD 120
+H+ CP+CR +++
Sbjct: 158 QHATCPLCRNRVN 170
>TAIR|locus:2028406 [details] [associations]
symbol:AT1G49210 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC016041
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 GO:GO:0004842
HOGENOM:HOG000237642 ProtClustDB:CLSN2682468 EMBL:DQ086858
EMBL:BT010932 EMBL:BT011647 IPI:IPI00546374 RefSeq:NP_175347.1
UniGene:At.38277 ProteinModelPortal:Q6NML0 SMR:Q6NML0
EnsemblPlants:AT1G49210.1 GeneID:841344 KEGG:ath:AT1G49210
TAIR:At1g49210 InParanoid:Q6NML0 OMA:CAFRRSS PhylomeDB:Q6NML0
Genevestigator:Q6NML0 GermOnline:AT1G49210 Uniprot:Q6NML0
Length = 225
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 36/121 (29%), Positives = 64/121 (52%)
Query: 1 MIVSVILALFLPCAGMSLVFIVYLSLLWCAS-NDNDNNGDVRLPVKAAAEGGLSASELDK 59
M++SV++ + C G+ +I+ + + ++ + P ++++ G+ L
Sbjct: 60 MLLSVLICGIICCLGLH--YIIRCAFRRSSRFMISEPISSLSTP-RSSSNKGIKKKALRM 116
Query: 60 LPKIS-GKELVM---GTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVC 115
P +S +E+ + G EC +CL + S + RL+P CNHGFH++C D WL H CP C
Sbjct: 117 FPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKC 176
Query: 116 R 116
R
Sbjct: 177 R 177
>TAIR|locus:2053994 [details] [associations]
symbol:AT2G18670 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
HOGENOM:HOG000237642 ProtClustDB:CLSN2683055 EMBL:AC005724
EMBL:DQ059107 EMBL:AY052699 EMBL:AY098955 EMBL:AY088712
IPI:IPI00522502 PIR:B84567 RefSeq:NP_179457.1 UniGene:At.13211
UniGene:At.69600 UniGene:At.73918 ProteinModelPortal:Q9ZV51
SMR:Q9ZV51 EnsemblPlants:AT2G18670.1 GeneID:816382
KEGG:ath:AT2G18670 TAIR:At2g18670 eggNOG:NOG270264
InParanoid:Q9ZV51 OMA:YRISGEP PhylomeDB:Q9ZV51
Genevestigator:Q9ZV51 Uniprot:Q9ZV51
Length = 181
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 43/123 (34%), Positives = 64/123 (52%)
Query: 1 MIVSVILALFLPCAGMSLVFIVYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELDKL 60
+I+ I LFL G++ V I+ L L S+ + ++ R + + GLS+ + KL
Sbjct: 37 VIMFSIFFLFLVLIGIASVLILPLLL----SSLHRHHRRRRRNRRQESSDGLSSRFVKKL 92
Query: 61 PKISGKELVMGT----ECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCR 116
P+ E T +C VC D Q R +PGC H FH +C D+WL K S CP+CR
Sbjct: 93 PQFKFSEPSTYTRYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLKASTCPICR 152
Query: 117 AKL 119
A++
Sbjct: 153 ARV 155
>TAIR|locus:2199902 [details] [associations]
symbol:AT1G23980 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC002423
HOGENOM:HOG000239562 EMBL:AK119101 EMBL:BT010323 IPI:IPI00526690
RefSeq:NP_173809.1 UniGene:At.41503 UniGene:At.65734
ProteinModelPortal:Q8GW38 SMR:Q8GW38 EnsemblPlants:AT1G23980.1
GeneID:839010 KEGG:ath:AT1G23980 TAIR:At1g23980 eggNOG:NOG265447
InParanoid:Q8GW38 OMA:MEGKRIC PhylomeDB:Q8GW38
ProtClustDB:CLSN2914164 Genevestigator:Q8GW38 GermOnline:AT1G23980
Uniprot:Q8GW38
Length = 369
Score = 171 (65.3 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 33/77 (42%), Positives = 45/77 (58%)
Query: 49 EGGLSASELDKLPKISGKELVMGT----ECAVCLDEVESEQPARLVPGCNHGFHLQCADS 104
+ GL + +D LP KE + GT +CAVCL E + RL+P C+H FH+ C D+
Sbjct: 116 DSGLDQALIDALPVFLYKE-IKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDT 174
Query: 105 WLSKHSVCPVCRAKLDS 121
WL +S CP+CR L S
Sbjct: 175 WLLSNSTCPLCRGTLFS 191
>TAIR|locus:2062502 [details] [associations]
symbol:AT2G35420 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC005314
EMBL:BT012632 IPI:IPI00523782 PIR:D84768 RefSeq:NP_181085.2
UniGene:At.48551 UniGene:At.66436 UniGene:At.67876
ProteinModelPortal:Q6NKR1 SMR:Q6NKR1 EnsemblPlants:AT2G35420.1
GeneID:818108 KEGG:ath:AT2G35420 TAIR:At2g35420 eggNOG:NOG326691
HOGENOM:HOG000034167 InParanoid:Q6NKR1 OMA:HISRIEV PhylomeDB:Q6NKR1
ProtClustDB:CLSN2915128 Genevestigator:Q6NKR1 Uniprot:Q6NKR1
Length = 254
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 46/130 (35%), Positives = 60/130 (46%)
Query: 1 MIVSVILA---LFLPCAGMSLVFI--VYLSLLWCASN-DNDNNGDVRLPVKAAAEG-GLS 53
M V+V+L LF+ AG +F+ L+ L+ N GD+ + V E GL
Sbjct: 21 MPVTVVLTGVLLFVIFAGFFSLFLWQFLLNRLFTTWNLQRTPYGDL-IHVATPPENTGLD 79
Query: 54 ASELDKLPKI---SGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHS 110
+ P S + GTECA+CL E E RL+ C H FH C D W H
Sbjct: 80 PFIIRSFPVFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELHK 139
Query: 111 VCPVCRAKLD 120
CPVCR +LD
Sbjct: 140 TCPVCRCELD 149
>TAIR|locus:2019110 [details] [associations]
symbol:AT1G74410 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006952 GO:GO:0046872
GO:GO:0008270 GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC011765 HOGENOM:HOG000242081 EMBL:DQ059105 EMBL:AY050433
EMBL:AY093797 EMBL:AY087335 IPI:IPI00547905 PIR:H96772
RefSeq:NP_565085.1 UniGene:At.20400 UniGene:At.28630
ProteinModelPortal:Q8LBA0 SMR:Q8LBA0 PaxDb:Q8LBA0 PRIDE:Q8LBA0
EnsemblPlants:AT1G74410.1 GeneID:843782 KEGG:ath:AT1G74410
GeneFarm:2887 TAIR:At1g74410 eggNOG:NOG325712 InParanoid:Q8LBA0
OMA:LPNCSHT PhylomeDB:Q8LBA0 ProtClustDB:CLSN2689196
Genevestigator:Q8LBA0 Uniprot:Q8LBA0
Length = 223
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 30/69 (43%), Positives = 41/69 (59%)
Query: 51 GLSASELDKLP-KISGKELVMG--TECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GLS L KLP I E+V T C +CL ++++ + R +P C+H FHL C D WL
Sbjct: 150 GLSGDSLRKLPCYIMSSEMVRRQVTHCTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLI 209
Query: 108 KHSVCPVCR 116
+H CP+CR
Sbjct: 210 RHGSCPICR 218
>TAIR|locus:2122363 [details] [associations]
symbol:AT4G09120 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC005359
HOGENOM:HOG000239182 EMBL:AL161514 ProtClustDB:CLSN2685392
IPI:IPI00517587 PIR:D85092 RefSeq:NP_192651.1 UniGene:At.54225
ProteinModelPortal:Q9M0R5 SMR:Q9M0R5 PaxDb:Q9M0R5
EnsemblPlants:AT4G09120.1 GeneID:826490 KEGG:ath:AT4G09120
TAIR:At4g09120 eggNOG:NOG270881 InParanoid:Q9M0R5 OMA:NLIRRSH
PhylomeDB:Q9M0R5 Genevestigator:Q9M0R5 Uniprot:Q9M0R5
Length = 345
Score = 169 (64.5 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 43/127 (33%), Positives = 62/127 (48%)
Query: 1 MIVSVILALFLPCAGMS--LVFIVYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELD 58
+I V+LA+F+ +S L I Y + A D + + A GL ++
Sbjct: 51 IIAIVVLAIFISLGMVSCCLHCIFYREEIGAAGQD---------VLHSRARRGLEKEVIE 101
Query: 59 KLP-----KISGKELVMG-TECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVC 112
P ++ G ++ G ECA+CL E E ++ R +P C+H FH C D WLS S C
Sbjct: 102 SFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTC 161
Query: 113 PVCRAKL 119
PVCRA L
Sbjct: 162 PVCRANL 168
>TAIR|locus:2044742 [details] [associations]
symbol:AT2G34990 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] [GO:0006863 "purine nucleobase
transport" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000239182 EMBL:AC004238 EMBL:DQ056567 IPI:IPI00522479
PIR:T00480 RefSeq:NP_181044.1 UniGene:At.62396
ProteinModelPortal:O64762 SMR:O64762 PRIDE:O64762
EnsemblPlants:AT2G34990.1 GeneID:818063 KEGG:ath:AT2G34990
TAIR:At2g34990 eggNOG:NOG302028 InParanoid:O64762 PhylomeDB:O64762
Genevestigator:O64762 GermOnline:AT2G34990 Uniprot:O64762
Length = 302
Score = 167 (63.8 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 40/128 (31%), Positives = 63/128 (49%)
Query: 1 MIVSVIL-ALFLPCAGMSLVFIVYLSLLWCASNDND--NNGDVRLPVKAAAEGGLSASEL 57
+++++IL A+F+ G++ V + S + + + + DV A GL + +
Sbjct: 16 LVITIILFAIFI--VGLASVCFRWTSRQFYSQESINPFTDSDVESRTSITAVRGLDEAII 73
Query: 58 DKLPKISGKEL------VMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSV 111
+ P E+ + G ECAVC+ E E + RL+P C H FH C WLS HS
Sbjct: 74 NSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDHST 133
Query: 112 CPVCRAKL 119
CP+CR L
Sbjct: 134 CPLCRVDL 141
>TAIR|locus:2207026 [details] [associations]
symbol:AT1G72200 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0006826 "iron
ion transport" evidence=RCA] [GO:0010106 "cellular response to iron
ion starvation" evidence=RCA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0015706 "nitrate transport" evidence=RCA]
[GO:0045492 "xylan biosynthetic process" evidence=RCA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC067754 EMBL:BT004268
EMBL:BT020487 IPI:IPI00541004 PIR:E96745 RefSeq:NP_177365.1
UniGene:At.35131 ProteinModelPortal:Q84W40 SMR:Q84W40
EnsemblPlants:AT1G72200.1 GeneID:843552 KEGG:ath:AT1G72200
TAIR:At1g72200 eggNOG:NOG238162 HOGENOM:HOG000239182
InParanoid:Q84W40 OMA:TMAILMI PhylomeDB:Q84W40
ProtClustDB:CLSN2679532 Genevestigator:Q84W40 GermOnline:AT1G72200
Uniprot:Q84W40
Length = 404
Score = 169 (64.5 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 46/126 (36%), Positives = 62/126 (49%)
Query: 1 MIVSVILALFLPCAGMSLVFIVY-LSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELDK 59
MIV V + FL G V+I L + N N+ L GL AS ++
Sbjct: 67 MIVLVSVFFFL---GFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQARGLDASIIET 123
Query: 60 LPKI---SGKELVMGTE---CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCP 113
P + K L +G E C+VCL+E E ++ RL+P C H FH C D+WL H+ CP
Sbjct: 124 FPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCP 183
Query: 114 VCRAKL 119
+CRA L
Sbjct: 184 LCRADL 189
>TAIR|locus:2197026 [details] [associations]
symbol:AT1G53820 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
HOGENOM:HOG000034162 ProtClustDB:CLSN2715378 EMBL:AC009324
EMBL:DQ056496 IPI:IPI00517219 RefSeq:NP_175785.1 UniGene:At.52187
ProteinModelPortal:P0C035 SMR:P0C035 PRIDE:P0C035
EnsemblPlants:AT1G53820.1 GeneID:841819 KEGG:ath:AT1G53820
TAIR:At1g53820 InParanoid:P0C035 OMA:IDEEEPK PhylomeDB:P0C035
Genevestigator:P0C035 GermOnline:AT1G53820 Uniprot:P0C035
Length = 310
Score = 166 (63.5 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 26/51 (50%), Positives = 33/51 (64%)
Query: 71 GTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKLDS 121
G ECAVCL ++ AR++P CNHGFH+ C D W HS CP+CR + S
Sbjct: 117 GLECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTVGS 167
>TAIR|locus:2062008 [details] [associations]
symbol:AT2G47560 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000034169 ProtClustDB:CLSN2683616 EMBL:AC002535
EMBL:BT003983 EMBL:BT005009 IPI:IPI00533213 PIR:T00428
RefSeq:NP_182278.1 UniGene:At.12430 UniGene:At.66383
ProteinModelPortal:O22255 SMR:O22255 EnsemblPlants:AT2G47560.1
GeneID:819369 KEGG:ath:AT2G47560 TAIR:At2g47560 eggNOG:NOG326521
InParanoid:O22255 OMA:PIENGSK PhylomeDB:O22255
Genevestigator:O22255 GermOnline:AT2G47560 Uniprot:O22255
Length = 227
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 42/131 (32%), Positives = 60/131 (45%)
Query: 1 MIVSVILALFLPCAGMSLVFIVYLSLLWCASNDNDNN---GDVRLPVKAAAEGGLSASEL 57
+++S ++ LF+ M L F Y L+ N +R + + L + L
Sbjct: 28 IMLSSVIVLFVAVI-MILCFHSYARWLFRRHNRRIRRRIRSHLRTLSASPRDQALDQAVL 86
Query: 58 DKLPKI--SGKELVMGTE---CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVC 112
DK+P S K E C+VCL E E E RL+P C H FH+ C D+W S C
Sbjct: 87 DKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTC 146
Query: 113 PVCRAKLDSHF 123
P+CRA + F
Sbjct: 147 PLCRAPVQPPF 157
>TAIR|locus:2028411 [details] [associations]
symbol:AT1G49200 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
EMBL:AC016041 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237642 ProtClustDB:CLSN2682468 eggNOG:NOG265447
EMBL:AY039551 EMBL:AY093753 IPI:IPI00547400 RefSeq:NP_175346.1
UniGene:At.26144 ProteinModelPortal:Q94BY6 SMR:Q94BY6
EnsemblPlants:AT1G49200.1 GeneID:841343 KEGG:ath:AT1G49200
TAIR:At1g49200 InParanoid:Q94BY6 OMA:CAFRRTS PhylomeDB:Q94BY6
Genevestigator:Q94BY6 GermOnline:AT1G49200 Uniprot:Q94BY6
Length = 226
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 35/121 (28%), Positives = 64/121 (52%)
Query: 1 MIVSVILALFLPCAGMSLVFIVYLSLLWCAS-NDNDNNGDVRLPVKAAAEGGLSASELDK 59
M++SV++ + C G+ +I+ + +S ++ + P ++ G++ L
Sbjct: 61 MLLSVLICGIICCLGLH--YIIRCAFRRTSSFMISEPIAGLSTPC-GSSNKGINKKALRM 117
Query: 60 LPKIS-GKELVM---GTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVC 115
P +S E+ + G EC +CL + S + R++P C+HGFH++C D WL +H CP C
Sbjct: 118 FPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKC 177
Query: 116 R 116
R
Sbjct: 178 R 178
>TAIR|locus:2146330 [details] [associations]
symbol:CNI1 "carbon/nitrogen insensitive 1" species:3702
"Arabidopsis thaliana" [GO:0005576 "extracellular region"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0043562 "cellular response to nitrogen
levels" evidence=IMP] [GO:0009814 "defense response, incompatible
interaction" evidence=IEP] [GO:0009816 "defense response to
bacterium, incompatible interaction" evidence=IMP] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009611 "response
to wounding" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 GO:GO:0009737 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0016020 GO:GO:0046872 GO:GO:0008270 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009816 GO:GO:0043562
eggNOG:COG5540 GO:GO:0004842 HOGENOM:HOG000239182 EMBL:AC007123
EMBL:AK226995 EMBL:AY084377 IPI:IPI00545224 RefSeq:NP_198094.1
UniGene:At.30807 ProteinModelPortal:Q8LGA5 SMR:Q8LGA5 STRING:Q8LGA5
EnsemblPlants:AT5G27420.1 GeneID:832801 KEGG:ath:AT5G27420
TAIR:At5g27420 InParanoid:Q8LGA5 OMA:PSFLWRN PhylomeDB:Q8LGA5
ProtClustDB:CLSN2687102 Genevestigator:Q8LGA5 GermOnline:AT5G27420
Uniprot:Q8LGA5
Length = 368
Score = 166 (63.5 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 42/125 (33%), Positives = 61/125 (48%)
Query: 1 MIVSVILALFLPCAGMSLVFIVYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELDKL 60
++V VI ALF G V+I + + S G R A GL A ++
Sbjct: 48 VVVVVIAALFF--MGFFTVYIRHCTGAVDGSV-TPAGGARRRVTNATVARGLDAETIETF 104
Query: 61 P-----KISGKELVMGT-ECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPV 114
P ++ +++ G ECA+CL+E E ++ RL+P C+H FH C +WL H CPV
Sbjct: 105 PTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPV 164
Query: 115 CRAKL 119
CR L
Sbjct: 165 CRTNL 169
>TAIR|locus:2122348 [details] [associations]
symbol:AT4G09100 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC005359 HOGENOM:HOG000237642 EMBL:AL161514 EMBL:DQ059117
EMBL:BT024815 IPI:IPI00531797 PIR:B85092 RefSeq:NP_192649.1
UniGene:At.54223 ProteinModelPortal:Q9M0R7 SMR:Q9M0R7
EnsemblPlants:AT4G09100.1 GeneID:826488 KEGG:ath:AT4G09100
TAIR:At4g09100 eggNOG:NOG246260 InParanoid:Q9M0R7 OMA:IGELECV
PhylomeDB:Q9M0R7 ProtClustDB:CLSN2915828 Genevestigator:Q9M0R7
GermOnline:AT4G09100 Uniprot:Q9M0R7
Length = 132
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 33/75 (44%), Positives = 41/75 (54%)
Query: 51 GLSASELDKLPKI-----SGKELVMGT-ECAVCLDEVESEQPARLVPGCNHGFHLQCADS 104
GL A + P G E +G EC VCL+E + ++ RLVP C H FH C D
Sbjct: 56 GLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVDI 115
Query: 105 WLSKHSVCPVCRAKL 119
WLS S CP+CRAK+
Sbjct: 116 WLSHSSTCPICRAKV 130
>TAIR|locus:2028506 [details] [associations]
symbol:AT1G49220 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
EMBL:AC016041 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
EMBL:DQ056489 IPI:IPI00517344 PIR:G96528 RefSeq:NP_175348.1
UniGene:At.52090 ProteinModelPortal:P0C034 SMR:P0C034
EnsemblPlants:AT1G49220.1 GeneID:841345 KEGG:ath:AT1G49220
TAIR:At1g49220 HOGENOM:HOG000237642 InParanoid:P0C034 OMA:VMIAPLE
PhylomeDB:P0C034 ProtClustDB:CLSN2682468 Genevestigator:P0C034
GermOnline:AT1G49220 Uniprot:P0C034
Length = 251
Score = 160 (61.4 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 37/122 (30%), Positives = 60/122 (49%)
Query: 1 MIVSVILALFLPCAGMSLVFIVYL--SLLWCASNDNDNNGDVRLPVKAAAEGGLSASELD 58
M++S+++ + C G+ + L S + S + R ++ G+ L
Sbjct: 60 MLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTR----GSSNKGIKKKALR 115
Query: 59 KLPKIS-GKELVM-GT--ECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPV 114
P +S E+ + G EC +CL + S + RL+P CNHGFH++C D WL +H CP
Sbjct: 116 MFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPK 175
Query: 115 CR 116
CR
Sbjct: 176 CR 177
>TAIR|locus:2009527 [details] [associations]
symbol:ATL15 "Arabidopsis toxicos en levadura 15"
species:3702 "Arabidopsis thaliana" [GO:0005576 "extracellular
region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0009416 "response to light stimulus" evidence=IEP] [GO:0033591
"response to L-ascorbic acid" evidence=IEP] [GO:0010167 "response
to nitrate" evidence=RCA] [GO:0015706 "nitrate transport"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0033591 GO:GO:0046872
GO:GO:0008270 GO:GO:0009416 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC006551 GO:GO:0004842 HOGENOM:HOG000239182
ProtClustDB:CLSN2679532 EMBL:DQ059099 EMBL:BT011235 EMBL:BT012542
EMBL:AK226235 IPI:IPI00544414 PIR:C86358 RefSeq:NP_173666.1
UniGene:At.19245 UniGene:At.63975 UniGene:At.68564
ProteinModelPortal:Q9SK92 SMR:Q9SK92 PRIDE:Q9SK92
EnsemblPlants:AT1G22500.1 GeneID:838856 KEGG:ath:AT1G22500
TAIR:At1g22500 eggNOG:NOG330336 InParanoid:Q9SK92 OMA:HTRSIQS
PhylomeDB:Q9SK92 Genevestigator:Q9SK92 Uniprot:Q9SK92
Length = 381
Score = 166 (63.5 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 35/84 (41%), Positives = 47/84 (55%)
Query: 42 LPVKAAAEGGLSASELDKLPKI---SGKELVMGTE---CAVCLDEVESEQPARLVPGCNH 95
L V+ E GL AS ++ P + K L +G E C VCL+E E ++ RL+P C H
Sbjct: 80 LNVRQTTEPGLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCH 139
Query: 96 GFHLQCADSWLSKHSVCPVCRAKL 119
FH C D+WL + CP+CRA L
Sbjct: 140 VFHPGCIDAWLRSQTTCPLCRANL 163
>TAIR|locus:2089398 [details] [associations]
symbol:ATL2 "TOXICOS EN LEVADURA 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0006952
"defense response" evidence=IDA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0009611 "response to wounding" evidence=RCA]
[GO:0009612 "response to mechanical stimulus" evidence=RCA]
[GO:0009697 "salicylic acid biosynthetic process" evidence=RCA]
[GO:0009814 "defense response, incompatible interaction"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009867
"jasmonic acid mediated signaling pathway" evidence=RCA]
[GO:0010310 "regulation of hydrogen peroxide metabolic process"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0031348 "negative regulation of defense
response" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] [GO:0042742 "defense response to
bacterium" evidence=RCA] [GO:0043900 "regulation of multi-organism
process" evidence=RCA] [GO:0050832 "defense response to fungus"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006952 GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 EMBL:L76926 EMBL:DQ086849
EMBL:AB022217 EMBL:AY062865 EMBL:AY081621 EMBL:AY088232
IPI:IPI00522954 PIR:T52079 RefSeq:NP_188294.1 UniGene:At.22750
ProteinModelPortal:Q8L9T5 SMR:Q8L9T5 EnsemblPlants:AT3G16720.1
GeneID:820924 KEGG:ath:AT3G16720 TAIR:At3g16720
HOGENOM:HOG000034169 InParanoid:Q8L9T5 OMA:KIMLSAI PhylomeDB:Q8L9T5
ProtClustDB:CLSN2913365 Genevestigator:Q8L9T5 GermOnline:AT3G16720
Uniprot:Q8L9T5
Length = 304
Score = 163 (62.4 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 48 AEGGLSASELDKLP--KISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSW 105
A GL + + LP S + ECAVCL E E + R++P C H FH+ C D W
Sbjct: 91 ASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMW 150
Query: 106 LSKHSVCPVCRAKLDS 121
HS CP+CR+ ++S
Sbjct: 151 FHSHSTCPLCRSLVES 166
>TAIR|locus:2125364 [details] [associations]
symbol:AT4G35840 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 EMBL:AL031986 EMBL:AL161588 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009535 EMBL:AJ400897 EMBL:AK118022
EMBL:BT006221 IPI:IPI00518433 PIR:T04694 RefSeq:NP_195309.2
UniGene:At.31379 ProteinModelPortal:Q8GT75 SMR:Q8GT75
DIP:DIP-40179N IntAct:Q8GT75 PaxDb:Q8GT75 PRIDE:Q8GT75
EnsemblPlants:AT4G35840.1 GeneID:829738 KEGG:ath:AT4G35840
GeneFarm:2883 TAIR:At4g35840 eggNOG:NOG260090 HOGENOM:HOG000242081
InParanoid:Q8GT75 OMA:FIDNNDL PhylomeDB:Q8GT75
ProtClustDB:CLSN2686667 Genevestigator:Q8GT75 GermOnline:AT4G35840
Uniprot:Q8GT75
Length = 236
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 31/75 (41%), Positives = 46/75 (61%)
Query: 51 GLSASELDKLPKI--SGKELV--MGTE--CAVCLDEVESEQPARLVPGCNHGFHLQCADS 104
GL+ +DK+PKI +GK + G + C+VCL + + + R +P C+H FHL C D+
Sbjct: 162 GLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDN 221
Query: 105 WLSKHSVCPVCRAKL 119
WL +H CP+CR L
Sbjct: 222 WLFRHGSCPMCRRDL 236
>TAIR|locus:2172550 [details] [associations]
symbol:AT5G57750 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG302028 EMBL:AB018118
IPI:IPI00528139 RefSeq:NP_200583.1 UniGene:At.55607
ProteinModelPortal:Q9FHG8 SMR:Q9FHG8 EnsemblPlants:AT5G57750.1
GeneID:835883 KEGG:ath:AT5G57750 TAIR:At5g57750
HOGENOM:HOG000199755 InParanoid:Q9FHG8 PhylomeDB:Q9FHG8
Genevestigator:Q9FHG8 Uniprot:Q9FHG8
Length = 210
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 52 LSASELDKLPKISGKELVMG-----TECAVCLDEVESEQPARLVPGCNHGFHLQCADSWL 106
+ S +D LP + K ++ G ++CAVCL E +E RL+P C+H FH++C D+WL
Sbjct: 96 IDQSFIDALPLLHYKTMI-GLRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWL 154
Query: 107 SKHSVCPVCRAKL 119
+S CP+CR L
Sbjct: 155 LTNSTCPLCRDNL 167
>UNIPROTKB|Q7XLY8 [details] [associations]
symbol:LOC_Os04g50100 "E3 ubiquitin-protein ligase
Os04g0590900" species:39947 "Oryza sativa Japonica Group"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GO:GO:0004842 EMBL:AP008210 EMBL:CM000141 EMBL:AL662981
EMBL:AK066752 RefSeq:NP_001053709.1 UniGene:Os.16906
UniGene:Os.52382 ProteinModelPortal:Q7XLY8 PRIDE:Q7XLY8
EnsemblPlants:LOC_Os04g50100.1 GeneID:4336823 KEGG:osa:4336823
Gramene:Q7XLY8 eggNOG:NOG264050 OMA:SHAFHQQ ProtClustDB:CLSN2693089
Uniprot:Q7XLY8
Length = 383
Score = 164 (62.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 27/55 (49%), Positives = 35/55 (63%)
Query: 65 GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
G V T+C+VCL E + RL+P C+H FH QC D+WL HS CP+CRA +
Sbjct: 148 GDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANI 202
>TAIR|locus:2123558 [details] [associations]
symbol:AT4G28890 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0000041 "transition
metal ion transport" evidence=RCA] [GO:0048527 "lateral root
development" evidence=RCA] [GO:0048589 "developmental growth"
evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 EMBL:AL161573
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 GO:GO:0004842
HOGENOM:HOG000034165 ProtClustDB:CLSN2683296 EMBL:DQ059125
EMBL:AL078469 EMBL:BX828195 EMBL:BT015731 EMBL:BT020178
IPI:IPI00531964 PIR:T08944 RefSeq:NP_194618.3 UniGene:At.28216
ProteinModelPortal:Q5XF85 SMR:Q5XF85 EnsemblPlants:AT4G28890.1
GeneID:829010 KEGG:ath:AT4G28890 TAIR:At4g28890 InParanoid:Q5XF85
OMA:SEIREDS PhylomeDB:Q5XF85 Genevestigator:Q5XF85 Uniprot:Q5XF85
Length = 432
Score = 165 (63.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 51 GLSASELDKLP--KISG-KELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL + ++ LP + S K G +C+VCL + ES + RL+P C H FH+ C D WL
Sbjct: 97 GLDKTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLE 156
Query: 108 KHSVCPVCRAKL 119
+H+ CP+CR ++
Sbjct: 157 QHATCPLCRDRV 168
>TAIR|locus:2156867 [details] [associations]
symbol:AT5G66070 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083
IPI:IPI00657375 RefSeq:NP_001032158.1 UniGene:At.28882
ProteinModelPortal:F4JZ26 SMR:F4JZ26 EnsemblPlants:AT5G66070.2
GeneID:836739 KEGG:ath:AT5G66070 OMA:IDKWLLR Uniprot:F4JZ26
Length = 245
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 29/77 (37%), Positives = 45/77 (58%)
Query: 47 AAEGGLSASELDKLPKI----SGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCA 102
A GL+ L+++PK+ + E+V C+VCL + + + R +P C+H FHL C
Sbjct: 172 AISKGLTGDSLNRIPKVRITDTSPEIV---SCSVCLQDFQVGETVRSLPHCHHMFHLPCI 228
Query: 103 DSWLSKHSVCPVCRAKL 119
D WL +H+ CP+CR L
Sbjct: 229 DKWLRRHASCPLCRRHL 245
>TAIR|locus:2097890 [details] [associations]
symbol:AT3G48030 "AT3G48030" species:3702 "Arabidopsis
thaliana" [GO:0001666 "response to hypoxia" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Pfam:PF04588 Prosite:PS00518
GO:GO:0016021 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL049658 EMBL:AB099346 EMBL:BT008566 EMBL:BT008679
IPI:IPI00518659 IPI:IPI00656859 IPI:IPI00656975 PIR:T06680
RefSeq:NP_190386.1 UniGene:At.35746 ProteinModelPortal:Q7X843
SMR:Q7X843 PaxDb:Q7X843 PRIDE:Q7X843 EnsemblPlants:AT3G48030.1
GeneID:823958 KEGG:ath:AT3G48030 TAIR:At3g48030 eggNOG:NOG250531
HOGENOM:HOG000034172 InParanoid:Q7X843 OMA:RFKSTNE PhylomeDB:Q7X843
ProtClustDB:CLSN2913369 Genevestigator:Q7X843 GermOnline:AT3G48030
InterPro:IPR007667 PROSITE:PS51503 Uniprot:Q7X843
Length = 349
Score = 161 (61.7 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 30/77 (38%), Positives = 42/77 (54%)
Query: 49 EGGLSASELDKLPKISGKELVMGTE----CAVCLDEVESEQPARLVPGCNHGFHLQCADS 104
+ GL + +D LP + + E CAVCL+E RL+P C+H FHL C D+
Sbjct: 178 DSGLDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDT 237
Query: 105 WLSKHSVCPVCRAKLDS 121
WL +S CP+CR L +
Sbjct: 238 WLLSNSTCPLCRRSLST 254
>TAIR|locus:2141005 [details] [associations]
symbol:AT4G17920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
EMBL:AL161547 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL021889 HOGENOM:HOG000034167 IPI:IPI00529622 PIR:T05078
RefSeq:NP_193526.1 UniGene:At.64189 ProteinModelPortal:O49691
SMR:O49691 EnsemblPlants:AT4G17920.1 GeneID:827517
KEGG:ath:AT4G17920 TAIR:At4g17920 eggNOG:NOG237727
InParanoid:O49691 OMA:FESHRTC PhylomeDB:O49691
ProtClustDB:CLSN2916158 Genevestigator:O49691 Uniprot:O49691
Length = 289
Score = 157 (60.3 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 42/132 (31%), Positives = 60/132 (45%)
Query: 1 MIVSVILALFLPCAGMSLVFI-VYLSLL---WCASNDNDNNGD--VRLPVKAAAEGGLSA 54
+I++VIL +F +L F +L + W + D D ++ P GL
Sbjct: 25 VILTVILLVFFFIGFFTLYFCKCFLDTMVQAWRLHHGGDTVSDNPLQQPEAPPVNPGLEL 84
Query: 55 SELDKLPKI---SGKEL---VMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSK 108
++ P S K+L G ECA+CL E + + RL+ C H FH +C D W
Sbjct: 85 RIINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLLTTCYHVFHQECIDLWFES 144
Query: 109 HSVCPVCRAKLD 120
H CPVCR LD
Sbjct: 145 HRTCPVCRRDLD 156
>TAIR|locus:2053791 [details] [associations]
symbol:AT2G42360 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0010200 "response to chitin" evidence=RCA] [GO:0015824 "proline
transport" evidence=RCA] [GO:0043090 "amino acid import"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AC005956
HOGENOM:HOG000034168 ProtClustDB:CLSN2683918 EMBL:DQ086853
EMBL:AY074652 EMBL:AK228239 IPI:IPI00531118 PIR:A84853
RefSeq:NP_181765.1 UniGene:At.67220 UniGene:At.70280
UniGene:At.75048 ProteinModelPortal:Q9SLC3 SMR:Q9SLC3 PRIDE:Q9SLC3
EnsemblPlants:AT2G42360.1 GeneID:818837 KEGG:ath:AT2G42360
TAIR:At2g42360 eggNOG:NOG287277 InParanoid:Q9SLC3 OMA:PNCKHIF
PhylomeDB:Q9SLC3 Genevestigator:Q9SLC3 GermOnline:AT2G42360
Uniprot:Q9SLC3
Length = 236
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 72 TECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKLD 120
TECAVCL ++ + AR +P C H FH+ C D+WL+ S CPVCR +++
Sbjct: 106 TECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVE 154
>TAIR|locus:2117622 [details] [associations]
symbol:RHA3B "RING-H2 finger A3B" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010200 "response
to chitin" evidence=IEP] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0010286 "heat acclimation" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:COG5540 EMBL:AL161587 HOGENOM:HOG000237642
ProtClustDB:CLSN2683892 EMBL:AF078825 EMBL:DQ059126 EMBL:AL117188
EMBL:BT030633 EMBL:AY087082 IPI:IPI00540490 PIR:T41745
RefSeq:NP_195273.1 UniGene:At.23630 ProteinModelPortal:Q9ZT49
SMR:Q9ZT49 STRING:Q9ZT49 EnsemblPlants:AT4G35480.1 GeneID:829700
KEGG:ath:AT4G35480 GeneFarm:4095 TAIR:At4g35480 InParanoid:Q9ZT49
OMA:CAICITE PhylomeDB:Q9ZT49 Genevestigator:Q9ZT49 Uniprot:Q9ZT49
Length = 200
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 28/75 (37%), Positives = 39/75 (52%)
Query: 42 LPVKAAAEGGLSASELDKLPKISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQC 101
LP +A+ D LP S + TECA+C+ E + R++P C+H FH+ C
Sbjct: 81 LPKSTYTASASTAAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAFHVAC 140
Query: 102 ADSWLSKHSVCPVCR 116
D WL+ S CP CR
Sbjct: 141 IDKWLTSRSSCPSCR 155
>TAIR|locus:4515102621 [details] [associations]
symbol:ATL1F species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GO:GO:0046872 GO:GO:0008270 EMBL:AC007767
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC084110
EMBL:DQ487502 EMBL:EF183179 IPI:IPI00519561 PIR:E86448
RefSeq:NP_001117398.1 UniGene:At.69078 ProteinModelPortal:Q9LQM2
SMR:Q9LQM2 PRIDE:Q9LQM2 EnsemblPlants:AT1G32361.1 GeneID:6240625
KEGG:ath:AT1G32361 TAIR:At1g32361 eggNOG:NOG250632 OMA:TIRLIST
PhylomeDB:Q9LQM2 ProtClustDB:CLSN2925449 Genevestigator:Q9LQM2
Uniprot:Q9LQM2
Length = 332
Score = 157 (60.3 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 32/106 (30%), Positives = 48/106 (45%)
Query: 24 LSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELDKLPKISGKELVMGTE-CAVCLDEVE 82
L +W + + ++ P GL + ++ P+ GT+ C++CL E
Sbjct: 103 LMRIWNNHRNRNRPSNLIQPSNPPENLGLDSKIIESFPEYPYSVKDHGTDQCSICLTEFM 162
Query: 83 SEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKLDSHFFNALE 128
+ RL+ CNH FH C D W H CPVCR +LD +LE
Sbjct: 163 DDDTIRLISTCNHSFHTICIDLWFEGHKTCPVCRRELDVEDRTSLE 208
>UNIPROTKB|A5PKC6 [details] [associations]
symbol:RNF12 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:COG5540 HOVERGEN:HBG009886 GeneTree:ENSGT00700000104290
CTD:51132 HOGENOM:HOG000273881 EMBL:DAAA02073777 EMBL:BC142439
IPI:IPI00824500 RefSeq:NP_001093198.1 UniGene:Bt.85872
Ensembl:ENSBTAT00000055387 GeneID:785287 KEGG:bta:785287
InParanoid:A5PKC6 OMA:NINDITC OrthoDB:EOG444KM0 NextBio:20927207
Uniprot:A5PKC6
Length = 634
Score = 161 (61.7 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 35/106 (33%), Positives = 55/106 (51%)
Query: 31 SNDNDNNGDVRLPV-----KAAAEGGLSASELDKLPKISGKELVMGTECAVCLDEVESEQ 85
S+D+D+ + L +A GL+ ++D LP +E C +C+ E +
Sbjct: 532 SDDSDSGSSLNLDQFLLLNQANQTRGLTKLQIDNLPLRFFEEKDAAKICTICITEYTAGN 591
Query: 86 PARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKLDSHFFNALESDN 131
R++P C+H +H QC D WL +HS CP+CR + HF E+DN
Sbjct: 592 MLRVLP-CSHEYHYQCIDQWLEEHSNCPICRGPVVDHF----EADN 632
>TAIR|locus:2010489 [details] [associations]
symbol:AT1G28040 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
EMBL:AC069471 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:DQ446294 IPI:IPI00537933 PIR:A86406 RefSeq:NP_174125.2
UniGene:At.51800 ProteinModelPortal:Q9C7E9 SMR:Q9C7E9 PaxDb:Q9C7E9
PRIDE:Q9C7E9 EnsemblPlants:AT1G28040.1 GeneID:839697
KEGG:ath:AT1G28040 TAIR:At1g28040 eggNOG:NOG239898
HOGENOM:HOG000006156 InParanoid:Q9C7E9 OMA:QSTIESY PhylomeDB:Q9C7E9
ProtClustDB:CLSN2920235 Genevestigator:Q9C7E9 Uniprot:Q9C7E9
Length = 299
Score = 154 (59.3 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 30/71 (42%), Positives = 41/71 (57%)
Query: 51 GLSASELDKLPKIS-GKELVM-GTE---CAVCLDEVESEQPARLVPGCNHGFHLQCADSW 105
GL S ++ K+ G+ + GT C +CL E S++ R +P C+H FH+QC D W
Sbjct: 225 GLDQSTIESYKKVELGESRRLPGTNGIICPICLSEYASKETVRCMPECDHCFHVQCIDEW 284
Query: 106 LSKHSVCPVCR 116
L HS CPVCR
Sbjct: 285 LKIHSSCPVCR 295
>TAIR|locus:2122358 [details] [associations]
symbol:AT4G09110 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0010043
"response to zinc ion" evidence=RCA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC005359
HOGENOM:HOG000239182 EMBL:AL161514 IPI:IPI00529690 PIR:C85092
RefSeq:NP_192650.1 UniGene:At.54224 ProteinModelPortal:Q9M0R6
SMR:Q9M0R6 PaxDb:Q9M0R6 PRIDE:Q9M0R6 EnsemblPlants:AT4G09110.1
GeneID:826489 KEGG:ath:AT4G09110 TAIR:At4g09110 eggNOG:KOG0800
InParanoid:Q9M0R6 OMA:CQQESES PhylomeDB:Q9M0R6
ProtClustDB:CLSN2685392 Genevestigator:Q9M0R6 GermOnline:AT4G09110
Uniprot:Q9M0R6
Length = 302
Score = 154 (59.3 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 25/49 (51%), Positives = 30/49 (61%)
Query: 71 GTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
G ECA+CL E ++ R +P C+H FH C D WLS S CP CRA L
Sbjct: 120 GVECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSSQSTCPACRANL 168
>TAIR|locus:2173772 [details] [associations]
symbol:AT5G40250 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000239562 EMBL:AB010699 EMBL:AK176313 IPI:IPI00524067
RefSeq:NP_198841.1 UniGene:At.51073 ProteinModelPortal:Q9FL07
SMR:Q9FL07 EnsemblPlants:AT5G40250.1 GeneID:834023
KEGG:ath:AT5G40250 TAIR:At5g40250 eggNOG:NOG264344
InParanoid:Q9FL07 OMA:FHYKEIV PhylomeDB:Q9FL07
ProtClustDB:CLSN2687536 Genevestigator:Q9FL07 GermOnline:AT5G40250
Uniprot:Q9FL07
Length = 376
Score = 156 (60.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 36/97 (37%), Positives = 49/97 (50%)
Query: 49 EGGLSASELDKLPKISGKELVMGT-------------ECAVCLDEVESEQPARLVPGCNH 95
+ GL + +D LP KE+V +CAVCL E + RL+P C+H
Sbjct: 105 DSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSH 164
Query: 96 GFHLQCADSWLSKHSVCPVCRAKLDSHFFNALESDNP 132
FHL C D+WL +S CP+CR L S F+ +NP
Sbjct: 165 AFHLNCIDTWLQSNSTCPLCRGTLFSPGFSM---ENP 198
>TAIR|locus:2169399 [details] [associations]
symbol:AT5G07040 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237642 EMBL:AB010697 IPI:IPI00519834
RefSeq:NP_196321.1 UniGene:At.54759 ProteinModelPortal:Q9FL42
SMR:Q9FL42 EnsemblPlants:AT5G07040.1 GeneID:830595
KEGG:ath:AT5G07040 TAIR:At5g07040 eggNOG:NOG256909
InParanoid:Q9FL42 OMA:GPCSICL PhylomeDB:Q9FL42
ProtClustDB:CLSN2687033 Genevestigator:Q9FL42 GermOnline:AT5G07040
Uniprot:Q9FL42
Length = 159
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 33/110 (30%), Positives = 56/110 (50%)
Query: 16 MSLVFIV-YLSLLWCASNDNDNNGDVRLPVKA-AAEG--GLSASELDKLPKI---SGKEL 68
+S + + Y+ + ++ ++ DV L + + AAE GL ++ P+I + L
Sbjct: 27 ISFIMLASYICIRSKSTGRDEATSDVVLDLPSPAAEVKLGLDRPVIESYPRIVLGDSRRL 86
Query: 69 VMGTE--CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCR 116
C++CL + E+ +P R +P CNH FH C D WL + CP+CR
Sbjct: 87 PRPNNGPCSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSATCPLCR 136
>TAIR|locus:2053863 [details] [associations]
symbol:RHA3A "RING-H2 finger A3A" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC007584
HOGENOM:HOG000237642 EMBL:AF078824 EMBL:AF370239 EMBL:AY062961
IPI:IPI00548768 PIR:T51844 RefSeq:NP_179337.1 UniGene:At.25384
ProteinModelPortal:O22755 SMR:O22755 STRING:O22755
EnsemblPlants:AT2G17450.1 GeneID:816251 KEGG:ath:AT2G17450
GeneFarm:4094 TAIR:At2g17450 eggNOG:NOG257865 InParanoid:O22755
OMA:DSTECAI PhylomeDB:O22755 ProtClustDB:CLSN2683892
Genevestigator:O22755 GermOnline:AT2G17450 Uniprot:O22755
Length = 185
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 38/120 (31%), Positives = 54/120 (45%)
Query: 1 MIVSVILALFLPCAGMSLVFIVYLSLLWCASNDND--NNGDVRLPVKAAAEGGLSASELD 58
+I+S +L + AG++ V + A D+ N G +K A L S
Sbjct: 30 VILSALLCALICVAGLAAVVRCAWLRRFTAGGDSPSPNKG-----LKKKALQSLPRSTFT 84
Query: 59 KLPKISGKELVMG--TECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCR 116
SG G TECA+CL + + R++P C H FH++C D WL S CP CR
Sbjct: 85 AAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCR 144
>TAIR|locus:2169063 [details] [associations]
symbol:AT5G47610 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 EMBL:AB025628 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237642 EMBL:AK175469 EMBL:AK176643 EMBL:AY085503
IPI:IPI00529585 RefSeq:NP_199572.1 UniGene:At.29885
ProteinModelPortal:Q9FGJ6 SMR:Q9FGJ6 EnsemblPlants:AT5G47610.1
GeneID:834811 KEGG:ath:AT5G47610 TAIR:At5g47610 eggNOG:NOG304426
InParanoid:Q9FGJ6 OMA:VISALIC PhylomeDB:Q9FGJ6
ProtClustDB:CLSN2714317 Genevestigator:Q9FGJ6 GermOnline:AT5G47610
Uniprot:Q9FGJ6
Length = 166
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 41/122 (33%), Positives = 58/122 (47%)
Query: 1 MIVSVILALFLPCAGMSLVFIVYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELDKL 60
+++ VI AL CA +SL + L ++D+ D P AA+ S L
Sbjct: 43 LLILVISALI--CA-LSLYAAIRCFLRPTLETEDDHKPD---PEAAAS----STPTTPTL 92
Query: 61 PKISGKELVMG-TECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
S EL ECA+CL E E + +++ C HGFH++C WLS S CP CR +
Sbjct: 93 VYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCRTSI 152
Query: 120 DS 121
S
Sbjct: 153 FS 154
>TAIR|locus:2040085 [details] [associations]
symbol:AT2G25410 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
HOGENOM:HOG000006156 EMBL:AC006300 EMBL:AY461616 IPI:IPI00526806
PIR:A84648 RefSeq:NP_565593.1 UniGene:At.39022 UniGene:At.68830
ProteinModelPortal:Q9SKK8 SMR:Q9SKK8 EnsemblPlants:AT2G25410.1
GeneID:817079 KEGG:ath:AT2G25410 TAIR:At2g25410 eggNOG:NOG260672
InParanoid:Q9SKK8 OMA:CERRTNS PhylomeDB:Q9SKK8
ProtClustDB:CLSN2917136 Genevestigator:Q9SKK8 Uniprot:Q9SKK8
Length = 377
Score = 152 (58.6 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 29/81 (35%), Positives = 42/81 (51%)
Query: 43 PVKAAAEGGLSASELDKLPKIS---GKELVMGTE---CAVCLDEVESEQPARLVPGCNHG 96
P A GL S ++ K+ + L G+ C +CL E +++ R +P C H
Sbjct: 290 PSNEVARIGLDESTIESYKKVELGESRRLPTGSNDVVCPICLSEYATKETVRCLPECEHC 349
Query: 97 FHLQCADSWLSKHSVCPVCRA 117
FH +C D+WL HS CPVCR+
Sbjct: 350 FHTECIDAWLKLHSSCPVCRS 370
>TAIR|locus:2176436 [details] [associations]
symbol:AT5G43420 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 EMBL:AB025638 UniGene:At.7156 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 EMBL:BT008334 IPI:IPI00524721
RefSeq:NP_199155.1 UniGene:At.30118 ProteinModelPortal:Q9LSW9
SMR:Q9LSW9 PaxDb:Q9LSW9 EnsemblPlants:AT5G43420.1 GeneID:834362
KEGG:ath:AT5G43420 TAIR:At5g43420 HOGENOM:HOG000034161
InParanoid:Q9LSW9 OMA:PIFKFKK PhylomeDB:Q9LSW9
ProtClustDB:CLSN2681784 Genevestigator:Q9LSW9 Uniprot:Q9LSW9
Length = 375
Score = 151 (58.2 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 73 ECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL--DSHF 123
EC+VCL E + E+ R++P C+H FH+ C D WL ++ CP+CR ++ D+ F
Sbjct: 137 ECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSF 189
>TAIR|locus:2039170 [details] [associations]
symbol:AT2G35910 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 HOGENOM:HOG000237642
EMBL:AC007017 EMBL:AY090933 EMBL:AY122973 IPI:IPI00540918
PIR:E84774 RefSeq:NP_850254.1 UniGene:At.37613
ProteinModelPortal:Q8RX29 SMR:Q8RX29 EnsemblPlants:AT2G35910.1
GeneID:818164 KEGG:ath:AT2G35910 TAIR:At2g35910 eggNOG:NOG261083
InParanoid:Q8RX29 OMA:TASCCAI PhylomeDB:Q8RX29
ProtClustDB:CLSN2918183 Genevestigator:Q8RX29 GermOnline:AT2G35910
Uniprot:Q8RX29
Length = 217
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 28/69 (40%), Positives = 37/69 (53%)
Query: 51 GLSASELDKLPKISGKELVMGTE---CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL + PKI E T CA+CL + + + R +P CNH FHL+C D+WL
Sbjct: 121 GLDEDTIQSYPKILYSEAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLR 180
Query: 108 KHSVCPVCR 116
+ CPVCR
Sbjct: 181 LNPTCPVCR 189
>TAIR|locus:2161058 [details] [associations]
symbol:ATCRT1 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AB009049 HSSP:Q9LRB7
HOGENOM:HOG000237766 OMA:RTNERGH ProtClustDB:CLSN2690330
EMBL:AY063905 EMBL:AY091194 IPI:IPI00529169 RefSeq:NP_200445.1
UniGene:At.8859 ProteinModelPortal:Q9FM98 SMR:Q9FM98
EnsemblPlants:AT5G56340.1 GeneID:835734 KEGG:ath:AT5G56340
TAIR:At5g56340 eggNOG:NOG328547 InParanoid:Q9FM98 PhylomeDB:Q9FM98
ArrayExpress:Q9FM98 Genevestigator:Q9FM98 Uniprot:Q9FM98
Length = 396
Score = 138 (53.6 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 57 LDKLPKISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCR 116
++ LP + +++ +C+VCLD+ E A+ +P C H FH++C WL HS CPVCR
Sbjct: 245 VEALPTV---KIMEPLQCSVCLDDFEKGTEAKEMP-CKHKFHVRCIVPWLELHSSCPVCR 300
Query: 117 AKLDS 121
+L S
Sbjct: 301 FELPS 305
Score = 33 (16.7 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 5/7 (71%), Positives = 7/7 (100%)
Query: 33 DNDNNGD 39
+ND+NGD
Sbjct: 95 ENDDNGD 101
>TAIR|locus:2081740 [details] [associations]
symbol:ATL5 "AtL5" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006461 "protein complex assembly"
evidence=TAS] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 EMBL:AL162651 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 HOGENOM:HOG000034169 EMBL:AF132015 EMBL:BT009649
IPI:IPI00522876 PIR:T48058 RefSeq:NP_191828.1 UniGene:At.4826
ProteinModelPortal:Q9LZJ6 SMR:Q9LZJ6 EnsemblPlants:AT3G62690.1
GeneID:825443 KEGG:ath:AT3G62690 GeneFarm:4973 TAIR:At3g62690
eggNOG:NOG304339 InParanoid:Q9LZJ6 OMA:PMEACER
ProtClustDB:CLSN2683616 Genevestigator:Q9LZJ6 GermOnline:AT3G62690
Uniprot:Q9LZJ6
Length = 257
Score = 146 (56.5 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 41 RLPVKAAAE-GGLSASELDKLP----KISGKELVMGTECAVCLDEVESEQPARLVPGCNH 95
R P ++++ L + L+K+P + E + EC+VCL E E + R++P C H
Sbjct: 76 RDPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPL-EECSVCLSEFEEDDEGRVLPKCGH 134
Query: 96 GFHLQCADSWLSKHSVCPVCRA 117
FH+ C D+W S CP+CRA
Sbjct: 135 VFHVDCIDTWFRSRSSCPLCRA 156
>TAIR|locus:2094108 [details] [associations]
symbol:DNF "DAY NEUTRAL FLOWERING" species:3702
"Arabidopsis thaliana" [GO:0005576 "extracellular region"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0048577 "negative
regulation of short-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005886
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
EMBL:AP000419 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0048577
GO:GO:0004842 HOGENOM:HOG000034170 EMBL:DQ086855 IPI:IPI00529417
RefSeq:NP_188545.1 UniGene:At.65108 ProteinModelPortal:Q9LJL6
SMR:Q9LJL6 EnsemblPlants:AT3G19140.1 GeneID:821448
KEGG:ath:AT3G19140 TAIR:At3g19140 eggNOG:NOG276244
InParanoid:Q9LJL6 OMA:FRCCLAY PhylomeDB:Q9LJL6
ProtClustDB:CLSN2915360 Genevestigator:Q9LJL6 GermOnline:AT3G19140
Uniprot:Q9LJL6
Length = 141
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 34/110 (30%), Positives = 49/110 (44%)
Query: 26 LLWCASNDNDNNGDVRLPVKAAAEGGLSASELDKLPKIS--GKELVMGTECAVCLDEVES 83
L +C D+D+ + G++ S L +P +S EC VCL +
Sbjct: 29 LAYCNKGDDDHLIHPSHSLHVIKATGINPSVLLSIPVVSFNANAFKDNIECVVCLSKFID 88
Query: 84 EQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKLDSHFFNALE-SDNP 132
E AR++P CNH FH D+WL CP CR ++ + L S NP
Sbjct: 89 EDKARVLPSCNHCFHFDFTDTWLHSDYTCPNCRKNVEEIQNHELSLSPNP 138
>TAIR|locus:2035843 [details] [associations]
symbol:AT1G14200 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006457 "protein folding" evidence=RCA]
[GO:0009408 "response to heat" evidence=RCA] [GO:0009644 "response
to high light intensity" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042542 "response
to hydrogen peroxide" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 eggNOG:COG5540
EMBL:AC007576 ProtClustDB:CLSN2682926 EMBL:BT004591 EMBL:AK227511
IPI:IPI00533236 PIR:G86275 RefSeq:NP_172872.1 UniGene:At.41984
ProteinModelPortal:Q9XI67 SMR:Q9XI67 STRING:Q9XI67 DNASU:837980
EnsemblPlants:AT1G14200.1 GeneID:837980 KEGG:ath:AT1G14200
TAIR:At1g14200 HOGENOM:HOG000029104 InParanoid:Q9XI67 OMA:WIGFSIN
PhylomeDB:Q9XI67 Genevestigator:Q9XI67 Uniprot:Q9XI67
Length = 179
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 25/67 (37%), Positives = 41/67 (61%)
Query: 55 SELDKLPKIS-GKELVM-GTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVC 112
SE++ +P++ G++ G CA+CLDE A +P C H FH +C + WL +H+ C
Sbjct: 88 SEVENMPRVVIGEDKEKYGGSCAICLDEWSKGDVAAEMP-CKHKFHSKCVEEWLGRHATC 146
Query: 113 PVCRAKL 119
P+CR ++
Sbjct: 147 PMCRYEM 153
>UNIPROTKB|C9IY58 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HOGENOM:HOG000234362 EMBL:AC069216 EMBL:AC117395
HGNC:HGNC:10057 ChiTaRS:RNF13 IPI:IPI00946275
ProteinModelPortal:C9IY58 SMR:C9IY58 STRING:C9IY58
Ensembl:ENST00000482083 ArrayExpress:C9IY58 Bgee:C9IY58
Uniprot:C9IY58
Length = 232
Score = 143 (55.4 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 58 DKLPKISGKELVMGTE---CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSK-HSVCP 113
D+L K+ + G E CA+CLDE E R++P C+H +H +C D WL+K CP
Sbjct: 102 DQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILP-CSHAYHCKCVDPWLTKTKKTCP 160
Query: 114 VCRAKL 119
VC+ K+
Sbjct: 161 VCKQKV 166
>UNIPROTKB|Q8H7N9 [details] [associations]
symbol:LOC_Os03g08920 "E3 ubiquitin-protein ligase
Os03g0188200" species:39947 "Oryza sativa Japonica Group"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0046872
GO:GO:0008270 EMBL:DP000009 EMBL:AP008209 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842 EMBL:AC121489
EMBL:AK058578 RefSeq:NP_001049216.1 UniGene:Os.37432
ProteinModelPortal:Q8H7N9 EnsemblPlants:LOC_Os03g08920.1
GeneID:4331886 KEGG:osa:4331886 Gramene:Q8H7N9 eggNOG:NOG237795
OMA:HVMKELA ProtClustDB:CLSN2693618 Uniprot:Q8H7N9
Length = 353
Score = 133 (51.9 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 23/47 (48%), Positives = 27/47 (57%)
Query: 73 ECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
ECAVCL E R++P C H FH C D WL+ CP+CRA L
Sbjct: 132 ECAVCLAEFADSDELRVLPACCHVFHPDCIDPWLAAAVTCPLCRANL 178
Score = 35 (17.4 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 5/13 (38%), Positives = 11/13 (84%)
Query: 1 MIVSVILALFLPC 13
++V+++L+ F PC
Sbjct: 10 VLVTLLLSAFRPC 22
>UNIPROTKB|C9JCY0 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HOGENOM:HOG000234362 EMBL:AC069216 EMBL:AC117395
HGNC:HGNC:10057 ChiTaRS:RNF13 IPI:IPI00976014
ProteinModelPortal:C9JCY0 SMR:C9JCY0 STRING:C9JCY0
Ensembl:ENST00000491086 ArrayExpress:C9JCY0 Bgee:C9JCY0
Uniprot:C9JCY0
Length = 233
Score = 143 (55.4 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 58 DKLPKISGKELVMGTE---CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSK-HSVCP 113
D+L K+ + G E CA+CLDE E R++P C+H +H +C D WL+K CP
Sbjct: 102 DQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILP-CSHAYHCKCVDPWLTKTKKTCP 160
Query: 114 VCRAKL 119
VC+ K+
Sbjct: 161 VCKQKV 166
>TAIR|locus:4010713762 [details] [associations]
symbol:AT3G20395 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002686
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:DQ487563 IPI:IPI00775679 RefSeq:NP_001078194.1
UniGene:At.71273 UniGene:At.8179 ProteinModelPortal:Q1G3M1
SMR:Q1G3M1 EnsemblPlants:AT3G20395.1 GeneID:5008015
KEGG:ath:AT3G20395 TAIR:At3g20395 OMA:MNCIDEW PhylomeDB:Q1G3M1
ProtClustDB:CLSN2920167 Genevestigator:Q1G3M1 Uniprot:Q1G3M1
Length = 223
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 26/73 (35%), Positives = 38/73 (52%)
Query: 51 GLSASELDKLPKISGK-ELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKH 109
GLS S + +P + E + C++CL + E + R + C H FH+ C D WL +
Sbjct: 147 GLSKSSIQNIPMFYNRSEHQTKSSCSICLQDWEEGEVGRKLARCGHTFHMNCIDEWLLRQ 206
Query: 110 SVCPVCRAKLDSH 122
CP+CR L SH
Sbjct: 207 ETCPICRDHL-SH 218
>TAIR|locus:2125652 [details] [associations]
symbol:AT4G32600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005886 EMBL:CP002687 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AY074271
EMBL:AY081300 EMBL:AY096655 IPI:IPI00534397 RefSeq:NP_194986.2
UniGene:At.27844 ProteinModelPortal:Q8VY23 SMR:Q8VY23
EnsemblPlants:AT4G32600.1 GeneID:829395 KEGG:ath:AT4G32600
HOGENOM:HOG000239557 InParanoid:Q8VY23 OMA:EHIIDIP PhylomeDB:Q8VY23
ProtClustDB:CLSN2691130 Genevestigator:Q8VY23 Uniprot:Q8VY23
Length = 453
Score = 138 (53.6 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 28/84 (33%), Positives = 49/84 (58%)
Query: 36 NNGDVRLPVKAAAEGGLSASELDKLPKISGKELVMGTECAVCLDEVESEQPARLVPGCNH 95
+NGD + +EGG+ A+ D ISG++ V C +CL + + + R +P C+H
Sbjct: 331 SNGDDN--GSSTSEGGVVAAGTDNERAISGEDAV----CCICLAKYANNEELRELP-CSH 383
Query: 96 GFHLQCADSWLSKHSVCPVCRAKL 119
FH +C D WL ++ CP+C++++
Sbjct: 384 FFHKECVDKWLKINASCPLCKSEV 407
Score = 33 (16.7 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 6/24 (25%), Positives = 13/24 (54%)
Query: 6 ILALFLPCAGMSLVFIVYLSLLWC 29
++ L C G ++ FI+ ++ C
Sbjct: 268 LVFLTFSCIGYAMPFILCTTICCC 291
>TAIR|locus:2081907 [details] [associations]
symbol:ATL4 "TOXICOS EN LEVADURA 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AF132014
EMBL:DQ059115 EMBL:AL163852 EMBL:BT028933 EMBL:AF079184
IPI:IPI00524160 PIR:T49217 PIR:T51855 PIR:T52407 RefSeq:NP_191581.1
UniGene:At.21814 ProteinModelPortal:Q9LY41 SMR:Q9LY41 PRIDE:Q9LY41
EnsemblPlants:AT3G60220.1 GeneID:825192 KEGG:ath:AT3G60220
GeneFarm:4972 TAIR:At3g60220 eggNOG:NOG296717 HOGENOM:HOG000239370
InParanoid:Q9LY41 OMA:SARWSQG PhylomeDB:Q9LY41
ProtClustDB:CLSN2915613 Genevestigator:Q9LY41 Uniprot:Q9LY41
Length = 334
Score = 147 (56.8 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 34/124 (27%), Positives = 59/124 (47%)
Query: 1 MIVSVILALFLPCAGM----SLVFIVYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASE 56
+++SV + L C S++ + S + ++D+ R+ + L +
Sbjct: 39 LLISVSICFLLRCLNRCSHRSVLPLSSSSSVATVTSDSRRFSGHRVSPETERSSVLDSLP 98
Query: 57 LDKLPKISGKELVMGT-ECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVC 115
+ K ++ + M + +CAVCL + E E RL+P C H FH C D WL + CP+C
Sbjct: 99 IFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLC 158
Query: 116 RAKL 119
R+ L
Sbjct: 159 RSPL 162
>TAIR|locus:2074678 [details] [associations]
symbol:AT3G11110 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009741 "response to brassinosteroid
stimulus" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC009991 EMBL:AC073395 EMBL:BT031381 IPI:IPI00524656
RefSeq:NP_187722.1 UniGene:At.53265 ProteinModelPortal:Q9SRM0
SMR:Q9SRM0 EnsemblPlants:AT3G11110.1 GeneID:820282
KEGG:ath:AT3G11110 TAIR:At3g11110 eggNOG:NOG241452
HOGENOM:HOG000238431 InParanoid:Q9SRM0 OMA:EKECCIC PhylomeDB:Q9SRM0
ProtClustDB:CLSN2684057 Genevestigator:Q9SRM0 GermOnline:AT3G11110
Uniprot:Q9SRM0
Length = 158
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 35/120 (29%), Positives = 54/120 (45%)
Query: 9 LFLPCAGMSLVFIVYLSLLW----CASNDNDN-NGDVRLPVKAAAEGGLSASELDKLPKI 63
LF A S+V L L+ C D+ N + + GGL +E+ LP +
Sbjct: 33 LFFALALFSVVLFFALLTLYIHRNCLPRDSINLHASSPDRLTRCRSGGLDPAEIRSLPVV 92
Query: 64 SGK----ELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
+ E EC +CL E + +++P C+H +H +C D WL S CP+CR +
Sbjct: 93 LCRRERAEEEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSI 152
>UNIPROTKB|B3KR12 [details] [associations]
symbol:RNF13 "cDNA FLJ33452 fis, clone BRAMY2000151, highly
similar to RING finger protein 13" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
EMBL:CH471052 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000234362 HOVERGEN:HBG063762 EMBL:AC069216 EMBL:AC117395
UniGene:Hs.12333 HGNC:HGNC:10057 ChiTaRS:RNF13 EMBL:AK090771
IPI:IPI00373832 SMR:B3KR12 STRING:B3KR12 Ensembl:ENST00000361785
UCSC:uc010hvh.3 Uniprot:B3KR12
Length = 262
Score = 143 (55.4 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 58 DKLPKISGKELVMGTE---CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSK-HSVCP 113
D+L K+ + G E CA+CLDE E R++P C+H +H +C D WL+K CP
Sbjct: 102 DQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILP-CSHAYHCKCVDPWLTKTKKTCP 160
Query: 114 VCRAKL 119
VC+ K+
Sbjct: 161 VCKQKV 166
>TAIR|locus:2178515 [details] [associations]
symbol:AT5G46650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AB016882
HOGENOM:HOG000034167 ProtClustDB:CLSN2916158 IPI:IPI00527161
RefSeq:NP_199477.1 UniGene:At.55407 ProteinModelPortal:Q9FIR0
SMR:Q9FIR0 EnsemblPlants:AT5G46650.1 GeneID:834708
KEGG:ath:AT5G46650 TAIR:At5g46650 eggNOG:NOG324377
InParanoid:Q9FIR0 OMA:EEDRYTL PhylomeDB:Q9FIR0
Genevestigator:Q9FIR0 Uniprot:Q9FIR0
Length = 289
Score = 144 (55.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 34/85 (40%), Positives = 41/85 (48%)
Query: 43 PVKAAAEGGLSASELDKLPKI---SGKEL---VMGTECAVCLDEVESEQPA-RLVPGCNH 95
PV+ GL + P S K+L G ECA+CL E E E RL+ C H
Sbjct: 77 PVQPPVNPGLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEEEHILLRLLTTCYH 136
Query: 96 GFHLQCADSWLSKHSVCPVCRAKLD 120
FH +C D WL + CPVCR LD
Sbjct: 137 VFHQECIDQWLESNKTCPVCRRNLD 161
>UNIPROTKB|I3LB70 [details] [associations]
symbol:LOC100738472 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104290 EMBL:FP340171
Ensembl:ENSSSCT00000030994 Uniprot:I3LB70
Length = 577
Score = 137 (53.3 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 51 GLSASELDKLPKIS-GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKH 109
GL+ ++D L S G+ + T C+VC+ E R +P C+H +H+ C D WLS++
Sbjct: 500 GLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSEN 557
Query: 110 SVCPVCR 116
S CP+CR
Sbjct: 558 STCPICR 564
Score = 35 (17.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 28 WCA-SNDNDNNGDVRLPVK 45
W A S N N+GD R ++
Sbjct: 76 WRAVSRTNPNSGDFRFSLE 94
>UNIPROTKB|F1NUJ3 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 GO:GO:0031902 GO:GO:0005765 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0051865 GeneTree:ENSGT00700000104226 EMBL:AADN02021136
EMBL:AADN02021135 IPI:IPI00820464 Ensembl:ENSGALT00000038908
Uniprot:F1NUJ3
Length = 272
Score = 143 (55.4 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 58 DKLPKISGKELVMGTE---CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSK-HSVCP 113
D+L K+ + G E CA+CLDE E R++P C+H +H +C D WL+K CP
Sbjct: 179 DQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILP-CSHAYHCKCVDPWLTKTKKTCP 237
Query: 114 VCRAKL 119
VC+ K+
Sbjct: 238 VCKQKV 243
>UNIPROTKB|E1BBI7 [details] [associations]
symbol:RLIM "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060816 "random inactivation of X chromosome"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433
GO:GO:0004842 KO:K16271 GeneTree:ENSGT00700000104290 CTD:51132
OMA:RNFGESD GO:GO:0060816 EMBL:DAAA02072549 IPI:IPI00705444
RefSeq:NP_001179251.1 UniGene:Bt.25074 ProteinModelPortal:E1BBI7
Ensembl:ENSBTAT00000020757 GeneID:539871 KEGG:bta:539871
NextBio:20878271 Uniprot:E1BBI7
Length = 611
Score = 137 (53.3 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 51 GLSASELDKLPKIS-GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKH 109
GL+ ++D L S G+ + T C+VC+ E R +P C+H +H+ C D WLS++
Sbjct: 534 GLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSEN 591
Query: 110 SVCPVCR 116
S CP+CR
Sbjct: 592 STCPICR 598
Score = 35 (17.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 28 WCA-SNDNDNNGDVRLPVK 45
W A S N N+GD R ++
Sbjct: 122 WRAVSRTNPNSGDFRFSLE 140
>TAIR|locus:2118651 [details] [associations]
symbol:AT4G30370 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=IEP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 EMBL:AL161576
GO:GO:0016567 GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 HOGENOM:HOG000237642 EMBL:AF160182 EMBL:AK118932
EMBL:BT005549 IPI:IPI00529274 PIR:B85355 RefSeq:NP_194766.1
UniGene:At.31839 UniGene:At.69303 UniGene:At.75149
ProteinModelPortal:Q9M0C3 SMR:Q9M0C3 EnsemblPlants:AT4G30370.1
GeneID:829160 KEGG:ath:AT4G30370 TAIR:At4g30370 eggNOG:NOG242482
InParanoid:Q9M0C3 OMA:PPPKANT PhylomeDB:Q9M0C3
ProtClustDB:CLSN2683055 Genevestigator:Q9M0C3 Uniprot:Q9M0C3
Length = 176
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 33/106 (31%), Positives = 49/106 (46%)
Query: 17 SLVFIVYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELDKLPKISGKELVM---GTE 73
SL F + + W + + +R + GLS + +LP+ E G +
Sbjct: 57 SLGFTFFFAFYWFLQRNYRHR--LRRHRRHEYSDGLSPRCVKRLPQFKYCEPSSEYGGDD 114
Query: 74 CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
C VC+D Q R +P C H FH +C D WL K S CP+CR ++
Sbjct: 115 CVVCIDGFRQGQWCRKLPRCGHVFHRKCVDLWLIKVSTCPICRDRV 160
>UNIPROTKB|F1RPK6 [details] [associations]
symbol:LOC100738472 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
KO:K16271 GeneTree:ENSGT00700000104290 CTD:51132 OMA:RNFGESD
EMBL:CU856210 RefSeq:XP_003135236.1 RefSeq:XP_003360418.1
RefSeq:XP_003484178.1 UniGene:Ssc.9094 Ensembl:ENSSSCT00000013579
GeneID:100511426 GeneID:100738472 KEGG:ssc:100511426
KEGG:ssc:100738472 Uniprot:F1RPK6
Length = 623
Score = 137 (53.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 51 GLSASELDKLPKIS-GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKH 109
GL+ ++D L S G+ + T C+VC+ E R +P C+H +H+ C D WLS++
Sbjct: 546 GLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSEN 603
Query: 110 SVCPVCR 116
S CP+CR
Sbjct: 604 STCPICR 610
Score = 35 (17.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 28 WCA-SNDNDNNGDVRLPVK 45
W A S N N+GD R ++
Sbjct: 122 WRAVSRTNPNSGDFRFSLE 140
>TAIR|locus:2057861 [details] [associations]
symbol:AT2G27940 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC006929
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AK118539
EMBL:BT005256 IPI:IPI00522216 PIR:G84678 RefSeq:NP_180361.1
UniGene:At.38697 ProteinModelPortal:Q9SJJ7 SMR:Q9SJJ7 IntAct:Q9SJJ7
EnsemblPlants:AT2G27940.1 GeneID:817338 KEGG:ath:AT2G27940
TAIR:At2g27940 eggNOG:NOG262125 HOGENOM:HOG000034166
InParanoid:Q9SJJ7 OMA:TVKVIPH PhylomeDB:Q9SJJ7
ProtClustDB:CLSN2683534 Genevestigator:Q9SJJ7 GermOnline:AT2G27940
Uniprot:Q9SJJ7
Length = 237
Score = 140 (54.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 51 GLSASELDKLP--KISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSK 108
GL + + LP + + +C +CL + E + +++P C H FH+ C D+WLS
Sbjct: 115 GLDSQAVRSLPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSS 174
Query: 109 HSVCPVCRA 117
+ CP+CR+
Sbjct: 175 YVTCPLCRS 183
>FB|FBgn0037705 [details] [associations]
symbol:mura "murashka" species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0048149 "behavioral response to ethanol" evidence=IMP]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IGI] [GO:0007616 "long-term memory" evidence=IMP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
EMBL:AE014297 GO:GO:0008355 GO:GO:0046872 GO:GO:0008270
GO:GO:0007616 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GeneTree:ENSGT00670000097625 UniGene:Dm.11144 GeneID:41145
KEGG:dme:Dmel_CG9381 CTD:41145 FlyBase:FBgn0037705 GenomeRNAi:41145
NextBio:822398 EMBL:BT125858 RefSeq:NP_731367.2 SMR:Q9VHC2
STRING:Q9VHC2 EnsemblMetazoa:FBtr0082118 UCSC:CG9381-RC
InParanoid:Q9VHC2 OMA:ARLAPCH Uniprot:Q9VHC2
Length = 1173
Score = 152 (58.6 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 51 GLSASELDKLPKIS-GKELVMGTE--CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL+ +E+D+LP E+ G + C VC+ + E Q R++P C+H FH +C D WL
Sbjct: 1051 GLTRNEIDQLPSYKFNPEVHNGDQSSCVVCMCDFELRQLLRVLP-CSHEFHAKCVDKWLR 1109
Query: 108 KHSVCPVCRAKLDSHF 123
+ CP+CR +F
Sbjct: 1110 SNRTCPICRGNASDYF 1125
>UNIPROTKB|Q3SZS9 [details] [associations]
symbol:RNF38 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:COG5540 GeneTree:ENSGT00670000097625 CTD:152006
HOGENOM:HOG000231638 HOVERGEN:HBG059283 OMA:FLLHPPH
OrthoDB:EOG4TB4B7 EMBL:DAAA02023138 EMBL:BC102724 IPI:IPI00686553
RefSeq:NP_001029753.1 UniGene:Bt.4320 SMR:Q3SZS9
Ensembl:ENSBTAT00000007260 GeneID:532877 KEGG:bta:532877
InParanoid:Q3SZS9 NextBio:20875836 Uniprot:Q3SZS9
Length = 432
Score = 146 (56.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 51 GLSASELDKLPKIS---GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL+ +++++LP T C VC+ + ES Q R++P CNH FH +C D WL
Sbjct: 354 GLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLK 412
Query: 108 KHSVCPVCRA 117
+ CP+CRA
Sbjct: 413 ANRTCPICRA 422
>UNIPROTKB|F1PLL1 [details] [associations]
symbol:RNF38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 CTD:152006 OMA:FLLHPPH
EMBL:AAEX03007963 RefSeq:XP_866889.1 Ensembl:ENSCAFT00000003636
GeneID:474766 KEGG:cfa:474766 Uniprot:F1PLL1
Length = 432
Score = 146 (56.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 51 GLSASELDKLPKIS---GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL+ +++++LP T C VC+ + ES Q R++P CNH FH +C D WL
Sbjct: 354 GLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLK 412
Query: 108 KHSVCPVCRA 117
+ CP+CRA
Sbjct: 413 ANRTCPICRA 422
>TAIR|locus:2062892 [details] [associations]
symbol:AT2G46160 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC005397 HOGENOM:HOG000237642 EMBL:AY074641 IPI:IPI00516262
PIR:D84899 RefSeq:NP_182139.1 UniGene:At.37022
ProteinModelPortal:O82353 SMR:O82353 EnsemblPlants:AT2G46160.1
GeneID:819223 KEGG:ath:AT2G46160 TAIR:At2g46160 eggNOG:NOG249940
InParanoid:O82353 OMA:CLCEYKE PhylomeDB:O82353
ProtClustDB:CLSN2683451 Genevestigator:O82353 Uniprot:O82353
Length = 214
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 30/101 (29%), Positives = 49/101 (48%)
Query: 21 IVYLSLLWCASNDNDN--NGDVRLPVKAAAEGGLSASELDKLPKISGKELVMG---TECA 75
++ +++ A DN++ GDV + + A K + + G T C+
Sbjct: 80 VILPRIIFVAEEDNEDLEAGDVVVGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCS 139
Query: 76 VCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCR 116
+CL E + + R++P C H FHL C D+WL + CPVCR
Sbjct: 140 ICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCR 180
>UNIPROTKB|B1AM81 [details] [associations]
symbol:RNF38 "RING finger protein 38" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL161792 EMBL:AL354935 UniGene:Hs.333503 HGNC:HGNC:18052
HOGENOM:HOG000231638 HOVERGEN:HBG059283 ChiTaRS:RNF38
IPI:IPI00744793 SMR:B1AM81 Ensembl:ENST00000377870
Ensembl:ENST00000377877 UCSC:uc003zzl.3 Uniprot:B1AM81
Length = 439
Score = 146 (56.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 51 GLSASELDKLPKIS---GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL+ +++++LP T C VC+ + ES Q R++P CNH FH +C D WL
Sbjct: 361 GLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLK 419
Query: 108 KHSVCPVCRA 117
+ CP+CRA
Sbjct: 420 ANRTCPICRA 429
>UNIPROTKB|F1RFD1 [details] [associations]
symbol:RNF215 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
OMA:EAPVEGW GeneTree:ENSGT00530000063291 EMBL:CT956025
RefSeq:XP_003483503.1 Ensembl:ENSSSCT00000010962 GeneID:100739143
KEGG:ssc:100739143 Uniprot:F1RFD1
Length = 377
Score = 117 (46.2 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 74 CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCR 116
CAVCLD ++Q R++P C H FH C D WL CP+C+
Sbjct: 325 CAVCLDYFCNKQWLRVLP-CKHEFHRDCVDPWLMLQQTCPLCK 366
Score = 48 (22.0 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 16/52 (30%), Positives = 21/52 (40%)
Query: 12 PCAGMSLVFIVYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELD-KLPK 62
P A L+ ++ L LW D P A GG A +D KLP+
Sbjct: 17 PPAPSPLLLLLPLLPLWLGLAGPGAAADGSKPTAGAGRGGARAVRVDVKLPR 68
>UNIPROTKB|F1NND0 [details] [associations]
symbol:RNF38 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:FLLHPPH EMBL:AADN02065332
IPI:IPI00598802 Ensembl:ENSGALT00000024714 Uniprot:F1NND0
Length = 459
Score = 146 (56.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 51 GLSASELDKLPKIS---GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL+ +++++LP T C VC+ + ES Q R++P CNH FH +C D WL
Sbjct: 383 GLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLK 441
Query: 108 KHSVCPVCRA 117
+ CP+CRA
Sbjct: 442 ANRTCPICRA 451
>TAIR|locus:1009023242 [details] [associations]
symbol:AT3G60966 "AT3G60966" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:DQ487553 IPI:IPI00656861
RefSeq:NP_001030907.1 UniGene:At.70726 UniGene:At.73258
ProteinModelPortal:Q1G3N1 SMR:Q1G3N1 EnsemblPlants:AT3G60966.1
GeneID:3769752 KEGG:ath:AT3G60966 TAIR:At3g60966 OMA:CEYITVS
PhylomeDB:Q1G3N1 Genevestigator:Q2V3M4 Uniprot:Q1G3N1
Length = 139
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 74 CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
CAVCL E E + R + C H FH C D+WLS+ S CP+CRA++
Sbjct: 62 CAVCLQEAEEGEKMRRLTICRHCFHADCIDTWLSEMSKCPLCRAQI 107
>WB|WBGene00007226 [details] [associations]
symbol:C01G6.4 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
eggNOG:NOG265447 EMBL:Z35595 HOGENOM:HOG000007448 KO:K11980
GeneTree:ENSGT00700000104290 PIR:T18836 RefSeq:NP_495976.1
ProteinModelPortal:Q17573 SMR:Q17573 DIP:DIP-24608N
MINT:MINT-1046840 PaxDb:Q17573 EnsemblMetazoa:C01G6.4.1
EnsemblMetazoa:C01G6.4.2 GeneID:182077 KEGG:cel:CELE_C01G6.4
UCSC:C01G6.4 CTD:182077 WormBase:C01G6.4 InParanoid:Q17573
OMA:ECAICMI NextBio:916292 Uniprot:Q17573
Length = 170
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 57 LDKLPKISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCR 116
L+++P + + ECA+C+ + E + R +P C H FH +C D WL K CP C
Sbjct: 78 LEQIPADVFRGDMTSNECAICMIDFEPGERIRFLP-CMHSFHQECVDEWLMKSFTCPSCL 136
Query: 117 AKLDSHFFNALESDN 131
+DS ++L + N
Sbjct: 137 EPVDSTILSSLTAHN 151
>UNIPROTKB|Q5XIX1 [details] [associations]
symbol:Rnf38 "Rnf38 protein" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:621856 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 EMBL:CH473962
GeneTree:ENSGT00670000097625 HOGENOM:HOG000231638
HOVERGEN:HBG059283 OrthoDB:EOG4TB4B7 EMBL:BC083548 IPI:IPI00758440
UniGene:Rn.82699 SMR:Q5XIX1 STRING:Q5XIX1
Ensembl:ENSRNOT00000060203 InParanoid:Q5XIX1 Genevestigator:Q5XIX1
Uniprot:Q5XIX1
Length = 432
Score = 145 (56.1 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 51 GLSASELDKLPKIS---GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL+ +++++LP T C VC+ + ES Q R++P CNH FH +C D WL
Sbjct: 354 GLTKADIEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLK 412
Query: 108 KHSVCPVCRA 117
+ CP+CRA
Sbjct: 413 GNRTCPICRA 422
>TAIR|locus:2178788 [details] [associations]
symbol:ATL63 "TOXICOS EN LEVADURA 63" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AB020755 EMBL:DQ056726
IPI:IPI00525382 RefSeq:NP_200666.1 UniGene:At.64310
ProteinModelPortal:Q9LUZ9 SMR:Q9LUZ9 STRING:Q9LUZ9
EnsemblPlants:AT5G58580.1 GeneID:835972 KEGG:ath:AT5G58580
TAIR:At5g58580 eggNOG:NOG263539 HOGENOM:HOG000210047
InParanoid:Q9LUZ9 OMA:EVRIEVF PhylomeDB:Q9LUZ9
ProtClustDB:CLSN2914836 Genevestigator:Q9LUZ9 GermOnline:AT5G58580
Uniprot:Q9LUZ9
Length = 308
Score = 142 (55.0 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 51 GLSASELDKLPKI----SGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWL 106
GL +S + +P + +E EC +CL E+ R + C HGFH++C D WL
Sbjct: 111 GLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWL 170
Query: 107 SKHSVCPVCRA 117
S HS CP+CR+
Sbjct: 171 SSHSTCPLCRS 181
>RGD|1310738 [details] [associations]
symbol:Rnf215 "ring finger protein 215" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1310738 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:CH473963 CTD:200312 OMA:EAPVEGW
GeneTree:ENSGT00530000063291 OrthoDB:EOG4D7Z6X IPI:IPI00212584
RefSeq:NP_001100704.1 UniGene:Rn.41695 Ensembl:ENSRNOT00000006827
GeneID:305478 KEGG:rno:305478 UCSC:RGD:1310738 NextBio:654678
Uniprot:D3ZNU0
Length = 379
Score = 123 (48.4 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 71 GTE-CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAK-LDSHF 123
G E CAVCLD ++Q R++P C H FH C D WL CP+C+ L +H+
Sbjct: 323 GAETCAVCLDYFCNKQWLRVLP-CKHEFHRDCVDPWLMLQQTCPLCKFNVLGNHY 376
Score = 41 (19.5 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 15/52 (28%), Positives = 20/52 (38%)
Query: 12 PCAGMSLVFIVYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELD-KLPK 62
P L+ ++ L LW D P A GG A +D KLP+
Sbjct: 19 PSPPSPLLLLLPLLPLWLGLMGPGAAADGSEPEARAGRGGARAVRVDVKLPR 70
>UNIPROTKB|Q9H0F5 [details] [associations]
symbol:RNF38 "RING finger protein 38" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 EMBL:CH471071
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 EMBL:AL161792
EMBL:AF394047 EMBL:AL136817 EMBL:AL354935 EMBL:BC033786
IPI:IPI00167875 IPI:IPI00375419 IPI:IPI00478430 RefSeq:NP_073618.3
RefSeq:NP_919309.1 RefSeq:NP_919310.1 RefSeq:NP_919311.1
RefSeq:NP_919313.1 UniGene:Hs.333503 PDB:1X4J PDBsum:1X4J
ProteinModelPortal:Q9H0F5 SMR:Q9H0F5 IntAct:Q9H0F5
PhosphoSite:Q9H0F5 DMDM:56749664 PRIDE:Q9H0F5 DNASU:152006
Ensembl:ENST00000259605 Ensembl:ENST00000350199
Ensembl:ENST00000353739 Ensembl:ENST00000357058
Ensembl:ENST00000377885 GeneID:152006 KEGG:hsa:152006
UCSC:uc003zzh.3 UCSC:uc003zzi.3 CTD:152006 GeneCards:GC09M036336
HGNC:HGNC:18052 HPA:HPA015853 MIM:612488 neXtProt:NX_Q9H0F5
PharmGKB:PA34438 HOGENOM:HOG000231638 HOVERGEN:HBG059283
InParanoid:Q9H0F5 OMA:FLLHPPH OrthoDB:EOG4TB4B7 PhylomeDB:Q9H0F5
ChiTaRS:RNF38 EvolutionaryTrace:Q9H0F5 GenomeRNAi:152006
NextBio:86839 ArrayExpress:Q9H0F5 Bgee:Q9H0F5 CleanEx:HS_RNF38
Genevestigator:Q9H0F5 GermOnline:ENSG00000137075 Uniprot:Q9H0F5
Length = 515
Score = 146 (56.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 51 GLSASELDKLPKIS---GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL+ +++++LP T C VC+ + ES Q R++P CNH FH +C D WL
Sbjct: 437 GLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLK 495
Query: 108 KHSVCPVCRA 117
+ CP+CRA
Sbjct: 496 ANRTCPICRA 505
>UNIPROTKB|F1ST85 [details] [associations]
symbol:RNF38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:FLLHPPH EMBL:FP015977
EMBL:FP015987 Ensembl:ENSSSCT00000005882 Uniprot:F1ST85
Length = 518
Score = 146 (56.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 51 GLSASELDKLPKIS---GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL+ +++++LP T C VC+ + ES Q R++P CNH FH +C D WL
Sbjct: 440 GLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLK 498
Query: 108 KHSVCPVCRA 117
+ CP+CRA
Sbjct: 499 ANRTCPICRA 508
>ZFIN|ZDB-GENE-060929-604 [details] [associations]
symbol:rnf44 "ring finger protein 44" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-060929-604 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
GeneTree:ENSGT00670000097625 HOGENOM:HOG000231638
HOVERGEN:HBG059283 EMBL:BC124246 IPI:IPI00801239
RefSeq:NP_001070092.1 UniGene:Dr.72465 ProteinModelPortal:Q08CG8
SMR:Q08CG8 Ensembl:ENSDART00000099235 GeneID:767686 KEGG:dre:767686
CTD:22838 InParanoid:Q08CG8 OMA:CSAQQLP OrthoDB:EOG498V0T
NextBio:20918075 ArrayExpress:Q08CG8 Bgee:Q08CG8 Uniprot:Q08CG8
Length = 448
Score = 145 (56.1 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 28/70 (40%), Positives = 40/70 (57%)
Query: 51 GLSASELDKLPKIS-GKELVMG--TECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL+ +++++LP E T C VC + ES Q R++P CNH FH +C D WL
Sbjct: 370 GLTKADIEQLPSYRFNLENHQSEQTLCVVCFSDFESRQLLRVLP-CNHEFHAKCVDKWLK 428
Query: 108 KHSVCPVCRA 117
+ CP+CRA
Sbjct: 429 TNRTCPICRA 438
>UNIPROTKB|B4DYE0 [details] [associations]
symbol:RNF44 "cDNA FLJ61466, highly similar to Homo sapiens
ring finger protein 44 (RNF44), mRNA" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC091934
HOVERGEN:HBG059283 UniGene:Hs.434888 HGNC:HGNC:19180 ChiTaRS:RNF44
EMBL:AC010316 EMBL:AK302385 IPI:IPI01010913 SMR:B4DYE0
Ensembl:ENST00000537487 Uniprot:B4DYE0
Length = 351
Score = 143 (55.4 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 51 GLSASELDKLPKIS---GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL+ +++++LP T C VC + E+ Q R++P CNH FH +C D WL
Sbjct: 273 GLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLP-CNHEFHTKCVDKWLK 331
Query: 108 KHSVCPVCRA 117
+ CP+CRA
Sbjct: 332 ANRTCPICRA 341
>UNIPROTKB|F1LNX1 [details] [associations]
symbol:Rnf38 "Protein Rnf38" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:621856 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 IPI:IPI00949289 Ensembl:ENSRNOT00000060201
ArrayExpress:F1LNX1 Uniprot:F1LNX1
Length = 464
Score = 145 (56.1 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 51 GLSASELDKLPKIS---GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL+ +++++LP T C VC+ + ES Q R++P CNH FH +C D WL
Sbjct: 386 GLTKADIEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLK 444
Query: 108 KHSVCPVCRA 117
+ CP+CRA
Sbjct: 445 GNRTCPICRA 454
>UNIPROTKB|Q9Y4L5 [details] [associations]
symbol:RNF115 "E3 ubiquitin-protein ligase RNF115"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005829 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 EMBL:AL160282 GO:GO:0051865
EMBL:AL390725 EMBL:CH471244 EMBL:AF542552 EMBL:AF419857
EMBL:AK290749 EMBL:BC054049 EMBL:BC064903 EMBL:AL079314
IPI:IPI00337608 RefSeq:NP_055270.1 RefSeq:XP_003960213.1
UniGene:Hs.523550 ProteinModelPortal:Q9Y4L5 SMR:Q9Y4L5
IntAct:Q9Y4L5 STRING:Q9Y4L5 PhosphoSite:Q9Y4L5 DMDM:56405389
PRIDE:Q9Y4L5 DNASU:27246 Ensembl:ENST00000369291 GeneID:101060478
GeneID:27246 KEGG:hsa:101060478 KEGG:hsa:27246 UCSC:uc001eoj.3
CTD:27246 GeneCards:GC01P145611 HGNC:HGNC:18154 HPA:HPA019130
neXtProt:NX_Q9Y4L5 PharmGKB:PA162401519 eggNOG:NOG235630
HOGENOM:HOG000116417 HOVERGEN:HBG059832 InParanoid:Q9Y4L5 KO:K11982
OMA:STHFAEF OrthoDB:EOG4VX262 PhylomeDB:Q9Y4L5 ChiTaRS:RNF115
GenomeRNAi:27246 NextBio:50157 ArrayExpress:Q9Y4L5 Bgee:Q9Y4L5
CleanEx:HS_RNF115 Genevestigator:Q9Y4L5 GermOnline:ENSG00000121848
Uniprot:Q9Y4L5
Length = 304
Score = 141 (54.7 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 56 ELDKLPKIS--GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCP 113
++ LP ++ +++ MG EC VC ++ E+ R +P CNH FH C WL H CP
Sbjct: 208 KITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLP-CNHFFHSSCIVPWLELHDTCP 266
Query: 114 VCRAKLD 120
VCR L+
Sbjct: 267 VCRKSLN 273
>ZFIN|ZDB-GENE-040426-772 [details] [associations]
symbol:rnf13 "ring finger protein 13" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 ZFIN:ZDB-GENE-040426-772 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 HOVERGEN:HBG063762
CTD:11342 KO:K15692 EMBL:BC044449 IPI:IPI00771289
RefSeq:NP_957338.1 UniGene:Dr.80141 ProteinModelPortal:Q803J9
GeneID:793981 KEGG:dre:793981 InParanoid:Q803J9 NextBio:20931664
ArrayExpress:Q803J9 Uniprot:Q803J9
Length = 377
Score = 143 (55.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 29/74 (39%), Positives = 41/74 (55%)
Query: 47 AAEGGLSASELDKLPKISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWL 106
A L +L KLP K+ CA+CLDE E + R++P C+H +H +C D WL
Sbjct: 213 ARRSRLRKDQLKKLPIHKFKKGDSYDVCAICLDEYEEGERLRVLP-CSHAYHCKCVDPWL 271
Query: 107 SK-HSVCPVCRAKL 119
+K CPVC+ K+
Sbjct: 272 TKTKKTCPVCKQKV 285
>TAIR|locus:2200610 [details] [associations]
symbol:AT1G26800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC006535
EMBL:AF361638 EMBL:AY052705 EMBL:AY055097 IPI:IPI00539847
RefSeq:NP_564263.1 UniGene:At.15652 ProteinModelPortal:Q9LQX2
SMR:Q9LQX2 STRING:Q9LQX2 EnsemblPlants:AT1G26800.1 GeneID:839223
KEGG:ath:AT1G26800 TAIR:At1g26800 InParanoid:Q9LQX2 OMA:IDAMPIV
PhylomeDB:Q9LQX2 ProtClustDB:CLSN2682926 Genevestigator:Q9LQX2
Uniprot:Q9LQX2
Length = 204
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 32/84 (38%), Positives = 49/84 (58%)
Query: 40 VRLPVKAAAEGGLSASE--LDKLP--KISGKELVMGTECAVCLDEVESEQPARLVPGCNH 95
+R +++ EG AS+ +D +P +I G E G EC +CL+E +SE+ + +P C H
Sbjct: 79 LRSLLESREEGRPPASKASIDAMPIVEIDGCE---G-ECVICLEEWKSEETVKEMP-CKH 133
Query: 96 GFHLQCADSWLSKHSVCPVCRAKL 119
FH C + WL H CPVCR ++
Sbjct: 134 RFHGGCIEKWLGFHGSCPVCRYEM 157
>TAIR|locus:4010713708 [details] [associations]
symbol:AT2G44578 "AT2G44578" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC003672
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG282867
IPI:IPI00846938 RefSeq:NP_001078058.1 UniGene:At.36739
UniGene:At.75339 ProteinModelPortal:A8MS73 SMR:A8MS73
EnsemblPlants:AT2G44578.1 GeneID:5007961 KEGG:ath:AT2G44578
TAIR:At2g44578 HOGENOM:HOG000015208 OMA:AEGEKMR PhylomeDB:A8MS73
ProtClustDB:CLSN2681377 Genevestigator:A8MS73 Uniprot:A8MS73
Length = 145
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 62 KISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
K + +E C +CL++ + R + C+H FH+ C D WL K S CP+CRA++
Sbjct: 58 KTAAEEKHSSPYCTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKKSTCPLCRAEI 115
>TAIR|locus:4515102991 [details] [associations]
symbol:AT2G44581 "AT2G44581" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC003672
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG329235
HOGENOM:HOG000015208 ProtClustDB:CLSN2681377 IPI:IPI00891754
RefSeq:NP_001118526.1 UniGene:At.73710 ProteinModelPortal:B3H6J7
SMR:B3H6J7 EnsemblPlants:AT2G44581.1 GeneID:6241397
KEGG:ath:AT2G44581 TAIR:At2g44581 OMA:ATEGEKM PhylomeDB:B3H6J7
Genevestigator:B3H6J7 Uniprot:B3H6J7
Length = 145
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 62 KISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
K + +E C +CL+ + R + C+H FH+ C D WL K S+CP+CRA++
Sbjct: 58 KTTAEEKHSSPYCTICLENATEGEKMRRIAACSHCFHVDCIDPWLEKKSMCPLCRAEI 115
>UNIPROTKB|F1NA38 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 GO:GO:0031902 GO:GO:0005765 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0051865 GeneTree:ENSGT00700000104226 OMA:MGSNDID
IPI:IPI00587571 EMBL:AADN02021136 EMBL:AADN02021135
Ensembl:ENSGALT00000016951 Uniprot:F1NA38
Length = 380
Score = 143 (55.4 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 58 DKLPKISGKELVMGTE---CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSK-HSVCP 113
D+L K+ + G E CA+CLDE E R++P C+H +H +C D WL+K CP
Sbjct: 220 DQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILP-CSHAYHCKCVDPWLTKTKKTCP 278
Query: 114 VCRAKL 119
VC+ K+
Sbjct: 279 VCKQKV 284
>UNIPROTKB|Q0VD51 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9913 "Bos taurus" [GO:0031902 "late endosome membrane"
evidence=ISS] [GO:0005765 "lysosomal membrane" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0051865 "protein autoubiquitination" evidence=ISS] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0005637 "nuclear
inner membrane" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 Prosite:PS00518 GO:GO:0016021 GO:GO:0000139
GO:GO:0031902 GO:GO:0005765 GO:GO:0005789 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
GO:GO:0004842 GO:GO:0051865 GO:GO:0005637
GeneTree:ENSGT00700000104226 HOGENOM:HOG000234362
HOVERGEN:HBG063762 EMBL:BC119833 IPI:IPI00707917
RefSeq:NP_001069610.1 UniGene:Bt.40316 ProteinModelPortal:Q0VD51
PRIDE:Q0VD51 Ensembl:ENSBTAT00000014803 GeneID:539035
KEGG:bta:539035 CTD:11342 InParanoid:Q0VD51 KO:K15692 OMA:MGSNDID
OrthoDB:EOG41NTMB NextBio:20877737 Uniprot:Q0VD51
Length = 380
Score = 143 (55.4 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 58 DKLPKISGKELVMGTE---CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSK-HSVCP 113
D+L K+ + G E CA+CLDE E R++P C+H +H +C D WL+K CP
Sbjct: 221 DQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILP-CSHAYHCKCVDPWLTKTKKTCP 279
Query: 114 VCRAKL 119
VC+ K+
Sbjct: 280 VCKQKV 285
>UNIPROTKB|Q90972 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
Prosite:PS00518 GO:GO:0016021 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
GO:GO:0004842 GO:GO:0051865 HOGENOM:HOG000234362 HOVERGEN:HBG063762
CTD:11342 KO:K15692 EMBL:X95455 EMBL:AY787020 IPI:IPI00587571
RefSeq:NP_990686.1 UniGene:Gga.3523 ProteinModelPortal:Q90972
STRING:Q90972 PRIDE:Q90972 GeneID:396303 KEGG:gga:396303
InParanoid:Q90972 NextBio:20816353 Uniprot:Q90972
Length = 381
Score = 143 (55.4 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 58 DKLPKISGKELVMGTE---CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSK-HSVCP 113
D+L K+ + G E CA+CLDE E R++P C+H +H +C D WL+K CP
Sbjct: 221 DQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILP-CSHAYHCKCVDPWLTKTKKTCP 279
Query: 114 VCRAKL 119
VC+ K+
Sbjct: 280 VCKQKV 285
>UNIPROTKB|E2QZ01 [details] [associations]
symbol:RNF13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 Ensembl:ENSCAFT00000013305 Uniprot:E2QZ01
Length = 381
Score = 143 (55.4 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 58 DKLPKISGKELVMGTE---CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSK-HSVCP 113
D+L K+ + G E CA+CLDE E R++P C+H +H +C D WL+K CP
Sbjct: 221 DQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILP-CSHAYHCKCVDPWLTKTKKTCP 279
Query: 114 VCRAKL 119
VC+ K+
Sbjct: 280 VCKQKV 285
>UNIPROTKB|F6XCX3 [details] [associations]
symbol:RNF13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
CTD:11342 KO:K15692 OMA:MGSNDID Ensembl:ENSCAFT00000013305
EMBL:AAEX03013674 EMBL:AAEX03013676 EMBL:AAEX03013675
RefSeq:XP_534303.1 ProteinModelPortal:F6XCX3 GeneID:477109
KEGG:cfa:477109 Uniprot:F6XCX3
Length = 381
Score = 143 (55.4 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 58 DKLPKISGKELVMGTE---CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSK-HSVCP 113
D+L K+ + G E CA+CLDE E R++P C+H +H +C D WL+K CP
Sbjct: 221 DQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILP-CSHAYHCKCVDPWLTKTKKTCP 279
Query: 114 VCRAKL 119
VC+ K+
Sbjct: 280 VCKQKV 285
>UNIPROTKB|O43567 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005637 "nuclear
inner membrane" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005765 "lysosomal membrane" evidence=ISS]
[GO:0031902 "late endosome membrane" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR003137 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0000139 GO:GO:0031902 GO:GO:0005765
GO:GO:0005789 GO:GO:0046872 EMBL:CH471052 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 GO:GO:0004842
GO:GO:0051865 GO:GO:0005637 HOGENOM:HOG000234362 HOVERGEN:HBG063762
CTD:11342 KO:K15692 OMA:MGSNDID OrthoDB:EOG41NTMB EMBL:AF037204
EMBL:AF070558 EMBL:AK313304 EMBL:AK090638 EMBL:CR456804
EMBL:AC069216 EMBL:AC117395 EMBL:BC009803 EMBL:BC009781
IPI:IPI00151036 RefSeq:NP_009213.1 RefSeq:NP_899237.1
UniGene:Hs.12333 ProteinModelPortal:O43567 SMR:O43567 IntAct:O43567
STRING:O43567 PhosphoSite:O43567 PRIDE:O43567 DNASU:11342
Ensembl:ENST00000344229 Ensembl:ENST00000392894 GeneID:11342
KEGG:hsa:11342 UCSC:uc003exn.4 GeneCards:GC03P149531
HGNC:HGNC:10057 HPA:HPA008709 MIM:609247 neXtProt:NX_O43567
PharmGKB:PA34422 InParanoid:O43567 ChiTaRS:RNF13 GenomeRNAi:11342
NextBio:43096 ArrayExpress:O43567 Bgee:O43567 CleanEx:HS_RNF13
Genevestigator:O43567 GermOnline:ENSG00000082996 Uniprot:O43567
Length = 381
Score = 143 (55.4 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 58 DKLPKISGKELVMGTE---CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSK-HSVCP 113
D+L K+ + G E CA+CLDE E R++P C+H +H +C D WL+K CP
Sbjct: 221 DQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILP-CSHAYHCKCVDPWLTKTKKTCP 279
Query: 114 VCRAKL 119
VC+ K+
Sbjct: 280 VCKQKV 285
>UNIPROTKB|Q5RCV8 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9601 "Pongo abelii" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005765 "lysosomal membrane"
evidence=ISS] [GO:0031902 "late endosome membrane" evidence=ISS]
[GO:0051865 "protein autoubiquitination" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 Prosite:PS00518 GO:GO:0016021
GO:GO:0000139 GO:GO:0031902 GO:GO:0005765 GO:GO:0005789
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0051865 GO:GO:0005637
HOVERGEN:HBG063762 CTD:11342 KO:K15692 EMBL:CR858160
RefSeq:NP_001125196.1 UniGene:Pab.18281 ProteinModelPortal:Q5RCV8
SMR:Q5RCV8 PRIDE:Q5RCV8 GeneID:100172087 KEGG:pon:100172087
Uniprot:Q5RCV8
Length = 381
Score = 143 (55.4 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 58 DKLPKISGKELVMGTE---CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSK-HSVCP 113
D+L K+ + G E CA+CLDE E R++P C+H +H +C D WL+K CP
Sbjct: 221 DQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILP-CSHAYHCKCVDPWLTKTKKTCP 279
Query: 114 VCRAKL 119
VC+ K+
Sbjct: 280 VCKQKV 285
>TAIR|locus:2018334 [details] [associations]
symbol:AT1G04360 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 EMBL:AC000104 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:COG5540 HOGENOM:HOG000034161 ProtClustDB:CLSN2681784
EMBL:BT004287 EMBL:BT006138 IPI:IPI00526956 PIR:B86175
RefSeq:NP_171931.1 UniGene:At.42456 ProteinModelPortal:P93823
SMR:P93823 PRIDE:P93823 EnsemblPlants:AT1G04360.1 GeneID:839540
KEGG:ath:AT1G04360 TAIR:At1g04360 InParanoid:P93823 OMA:HIDCIDI
PhylomeDB:P93823 Genevestigator:P93823 GermOnline:AT1G04360
Uniprot:P93823
Length = 381
Score = 143 (55.4 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 51 GLSASELDKLP--KISGKELVMGTE--------CAVCLDEVESEQPARLVPGCNHGFHLQ 100
GL S + +P K +++V G E C+VCL+E + ++ R++P C H FH+
Sbjct: 101 GLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHID 160
Query: 101 CADSWLSKHSVCPVCRAKL 119
C D WL ++ CP+CR +
Sbjct: 161 CIDIWLQGNANCPLCRTSV 179
>UNIPROTKB|F1LPR4 [details] [associations]
symbol:Rnf38 "Protein Rnf38" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:621856 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 OMA:FLLHPPH IPI:IPI00776878
Ensembl:ENSRNOT00000018863 ArrayExpress:F1LPR4 Uniprot:F1LPR4
Length = 517
Score = 145 (56.1 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 51 GLSASELDKLPKIS---GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL+ +++++LP T C VC+ + ES Q R++P CNH FH +C D WL
Sbjct: 439 GLTKADIEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLK 497
Query: 108 KHSVCPVCRA 117
+ CP+CRA
Sbjct: 498 GNRTCPICRA 507
>MGI|MGI:1920719 [details] [associations]
symbol:Rnf38 "ring finger protein 38" species:10090 "Mus
musculus" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0036126 "sperm flagellum"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
MGI:MGI:1920719 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
GeneTree:ENSGT00670000097625 CTD:152006 HOGENOM:HOG000231638
HOVERGEN:HBG059283 OMA:FLLHPPH ChiTaRS:RNF38 EMBL:AK029650
EMBL:BC060730 EMBL:BC062976 IPI:IPI00221948 IPI:IPI00515598
RefSeq:NP_780410.2 UniGene:Mm.262859 ProteinModelPortal:Q8BI21
SMR:Q8BI21 PhosphoSite:Q8BI21 PRIDE:Q8BI21
Ensembl:ENSMUST00000098098 GeneID:73469 KEGG:mmu:73469
InParanoid:Q8BI21 NextBio:338343 Bgee:Q8BI21 CleanEx:MM_RNF38
Genevestigator:Q8BI21 GermOnline:ENSMUSG00000035696 Uniprot:Q8BI21
Length = 518
Score = 145 (56.1 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 51 GLSASELDKLPKIS---GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL+ +++++LP T C VC+ + ES Q R++P CNH FH +C D WL
Sbjct: 440 GLTKADIEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLK 498
Query: 108 KHSVCPVCRA 117
+ CP+CRA
Sbjct: 499 GNRTCPICRA 508
>UNIPROTKB|E2QY59 [details] [associations]
symbol:RNF115 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 EMBL:AAEX03011037
Ensembl:ENSCAFT00000017818 OMA:RTNERGH NextBio:20898321
Uniprot:E2QY59
Length = 319
Score = 141 (54.7 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 56 ELDKLPKIS--GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCP 113
++ LP ++ +++ MG EC VC ++ E+ R +P CNH FH C WL H CP
Sbjct: 224 KITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLP-CNHFFHSSCIVPWLELHDTCP 282
Query: 114 VCRAKLD 120
VCR L+
Sbjct: 283 VCRKSLN 289
>TAIR|locus:2102569 [details] [associations]
symbol:RZF1 "AT3G56580" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008270
"zinc ion binding" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0009414 "response to water
deprivation" evidence=IEP] [GO:1902006 "negative regulation of
proline biosynthetic process" evidence=IMP] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 eggNOG:NOG235630
KO:K11982 HOGENOM:HOG000237766 ProtClustDB:CLSN2688851
EMBL:AY045983 EMBL:AY096613 EMBL:DQ059114 IPI:IPI00530247
RefSeq:NP_001030874.1 RefSeq:NP_567039.1 RefSeq:NP_974448.1
UniGene:At.26186 ProteinModelPortal:Q94AK4 SMR:Q94AK4 STRING:Q94AK4
EnsemblPlants:AT3G56580.1 EnsemblPlants:AT3G56580.2
EnsemblPlants:AT3G56580.3 GeneID:824825 KEGG:ath:AT3G56580
TAIR:At3g56580 InParanoid:Q94AK4 OMA:AYYNETA PhylomeDB:Q94AK4
ArrayExpress:Q94AK4 Genevestigator:Q94AK4 Uniprot:Q94AK4
Length = 320
Score = 141 (54.7 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 30/70 (42%), Positives = 41/70 (58%)
Query: 55 SELDKLP--KISGKELVMG-TECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSV 111
S +D LP KI+ K L + C VC DE E + A+ +P C+H +H C WL +H+
Sbjct: 164 SSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMP-CHHIYHSDCIVPWLVQHNS 222
Query: 112 CPVCRAKLDS 121
CPVCR +L S
Sbjct: 223 CPVCRKELPS 232
>ZFIN|ZDB-GENE-101206-1 [details] [associations]
symbol:wu:fb39e10 "wu:fb39e10" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-101206-1 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 EMBL:CR385081 IPI:IPI00898579
RefSeq:XP_001923015.2 UniGene:Dr.76926 Ensembl:ENSDART00000128102
GeneID:561841 KEGG:dre:561841 NextBio:20884119 Bgee:E7F6I4
Uniprot:E7F6I4
Length = 474
Score = 144 (55.7 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 48 AEGGLSASELDKLP-KISGKELVMG-TECAVCLDEVESEQPARLVPGCNHGFHLQCADSW 105
A+ LS +E+++LP K G T+C +C E ++ + R++P C H +H++C D W
Sbjct: 395 AKNTLSKAEIERLPIKTYDPTHSAGKTDCQICFSEYKAGERLRMLP-CLHDYHVKCIDRW 453
Query: 106 LSKHSVCPVCRA 117
L +++ CP+CRA
Sbjct: 454 LKENATCPICRA 465
>UNIPROTKB|F1MWZ9 [details] [associations]
symbol:AMFR "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051259 "protein oligomerization" evidence=IEA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IEA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IEA] [GO:0030176 "integral to endoplasmic reticulum
membrane" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003892 InterPro:IPR026608
Pfam:PF02845 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51140
SMART:SM00184 SMART:SM00546 GO:GO:0051259 GO:GO:0046872
GO:GO:0008270 GO:GO:0030176 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030433 GO:GO:0004842 OMA:YTDFIME GO:GO:0030968 GO:GO:0000209
PANTHER:PTHR12477:SF4 GeneTree:ENSGT00530000062938
EMBL:DAAA02046496 EMBL:DAAA02046497 IPI:IPI00742613
Ensembl:ENSBTAT00000004952 Uniprot:F1MWZ9
Length = 646
Score = 124 (48.7 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 27/68 (39%), Positives = 37/68 (54%)
Query: 66 KELVMGTE-CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKLDSHFF 124
+EL + + CA+C D S Q AR +P C H FH C SWL + + CP CR L+
Sbjct: 335 EELAVNNDDCAICWD---SMQAARKLP-CGHLFHNSCLRSWLEQDTSCPTCRMSLNIADN 390
Query: 125 NALESDNP 132
N + D+P
Sbjct: 391 NRVREDHP 398
Score = 45 (20.9 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 7/21 (33%), Positives = 16/21 (76%)
Query: 2 IVSVILALFLPCAGMSLVFIV 22
++S+++A+ L C G+++V V
Sbjct: 189 VLSLLVAMLLSCCGLAVVCCV 209
>ZFIN|ZDB-GENE-030131-8693 [details] [associations]
symbol:si:dkey-20n3.1 "si:dkey-20n3.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-030131-8693 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00670000097625
EMBL:CR936846 IPI:IPI00511731 RefSeq:XP_695200.4 UniGene:Dr.159457
UniGene:Dr.76333 Ensembl:ENSDART00000089233
Ensembl:ENSDART00000139241 GeneID:566820 KEGG:dre:566820
NextBio:20888388 Uniprot:E7FDX7
Length = 673
Score = 146 (56.5 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 51 GLSASELDKLPKIS---GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL+ +++++LP T C VC+ + ES Q R++P CNH FH +C D WL
Sbjct: 595 GLTKADIEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLK 653
Query: 108 KHSVCPVCRA 117
+ CP+CRA
Sbjct: 654 ANRTCPICRA 663
>TAIR|locus:2082762 [details] [associations]
symbol:AT3G61550 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132962 GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237642 ProtClustDB:CLSN2683451 EMBL:AF428280
EMBL:AY116968 EMBL:AK221661 IPI:IPI00532044 PIR:T47947
RefSeq:NP_191714.1 UniGene:At.948 ProteinModelPortal:Q9M313
SMR:Q9M313 EnsemblPlants:AT3G61550.1 GeneID:825328
KEGG:ath:AT3G61550 TAIR:At3g61550 eggNOG:NOG252222
InParanoid:Q9M313 OMA:CEYMEEE PhylomeDB:Q9M313
Genevestigator:Q9M313 GermOnline:AT3G61550 Uniprot:Q9M313
Length = 212
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 72 TECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCR 116
T C++CL E E+ R++P C H FH+ C D+WL + CPVCR
Sbjct: 134 TTCSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCR 178
>UNIPROTKB|F1N0G7 [details] [associations]
symbol:RNF44 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 CTD:22838 OMA:CSAQQLP
EMBL:DAAA02020035 IPI:IPI00688854 RefSeq:NP_001179642.1
UniGene:Bt.6313 ProteinModelPortal:F1N0G7
Ensembl:ENSBTAT00000023598 GeneID:531968 KEGG:bta:531968
NextBio:20875566 Uniprot:F1N0G7
Length = 432
Score = 143 (55.4 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 51 GLSASELDKLPKIS---GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL+ +++++LP T C VC + E+ Q R++P CNH FH +C D WL
Sbjct: 354 GLTKADIEQLPSYRFHPDSHQSEQTLCVVCFSDFEARQLLRVLP-CNHEFHTKCVDKWLK 412
Query: 108 KHSVCPVCRA 117
+ CP+CRA
Sbjct: 413 ANRTCPICRA 422
>UNIPROTKB|Q7L0R7 [details] [associations]
symbol:RNF44 "RING finger protein 44" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 HSSP:Q9H0F5 HOGENOM:HOG000231638
HOVERGEN:HBG059283 CTD:22838 OMA:CSAQQLP OrthoDB:EOG498V0T
EMBL:AB029023 EMBL:BC039833 EMBL:BC063297 EMBL:AL834489
IPI:IPI00470579 RefSeq:NP_055716.1 UniGene:Hs.434888
ProteinModelPortal:Q7L0R7 SMR:Q7L0R7 IntAct:Q7L0R7
PhosphoSite:Q7L0R7 DMDM:74758994 PRIDE:Q7L0R7
Ensembl:ENST00000274811 GeneID:22838 KEGG:hsa:22838 UCSC:uc003mek.1
GeneCards:GC05M175886 HGNC:HGNC:19180 HPA:HPA038981
neXtProt:NX_Q7L0R7 PharmGKB:PA38819 InParanoid:Q7L0R7
PhylomeDB:Q7L0R7 ChiTaRS:RNF44 GenomeRNAi:22838 NextBio:43277
ArrayExpress:Q7L0R7 Bgee:Q7L0R7 CleanEx:HS_RNF44
Genevestigator:Q7L0R7 Uniprot:Q7L0R7
Length = 432
Score = 143 (55.4 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 51 GLSASELDKLPKIS---GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL+ +++++LP T C VC + E+ Q R++P CNH FH +C D WL
Sbjct: 354 GLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLP-CNHEFHTKCVDKWLK 412
Query: 108 KHSVCPVCRA 117
+ CP+CRA
Sbjct: 413 ANRTCPICRA 422
>RGD|621856 [details] [associations]
symbol:Rnf38 "ring finger protein 38" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI] [GO:0007286
"spermatid development" evidence=NAS] [GO:0008584 "male gonad
development" evidence=IEP] [GO:0036126 "sperm flagellum"
evidence=IDA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:621856 GO:GO:0019861 GO:GO:0007286 GO:GO:0046872
GO:GO:0008270 GO:GO:0008584 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 CTD:152006 HOVERGEN:HBG059283 IPI:IPI00758440
UniGene:Rn.82699 EMBL:AF480444 RefSeq:NP_604462.1
ProteinModelPortal:Q8R4E3 SMR:Q8R4E3 STRING:Q8R4E3
PhosphoSite:Q8R4E3 GeneID:171501 KEGG:rno:171501 UCSC:RGD:621856
InParanoid:Q8R4E3 NextBio:622473 Genevestigator:Q8R4E3
Uniprot:Q8R4E3
Length = 432
Score = 143 (55.4 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 51 GLSASELDKLP--KIS-GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL+ +++++LP + + T C VC+ + ES Q R++P CNH FH +C D WL
Sbjct: 354 GLTKADIEQLPFYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLK 412
Query: 108 KHSVCPVCRA 117
+ CP+CRA
Sbjct: 413 GNRTCPICRA 422
>UNIPROTKB|I3LG86 [details] [associations]
symbol:RNF13 "Ring finger protein 13" species:9823 "Sus
scrofa" [GO:0051865 "protein autoubiquitination" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0005765
"lysosomal membrane" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225 GO:GO:0031902
GO:GO:0005765 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0051865
GeneTree:ENSGT00700000104226 CTD:11342 KO:K15692 OMA:MGSNDID
EMBL:FP312790 EMBL:CU915458 EMBL:GACC01000242 RefSeq:XP_003358656.2
Ensembl:ENSSSCT00000022374 GeneID:100621829 KEGG:ssc:100621829
Uniprot:I3LG86
Length = 381
Score = 142 (55.0 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 58 DKLPKISGKELVMGTE---CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSK-HSVCP 113
D+L K+ + G E CA+CLDE E R++P C+H +H +C D WL+K CP
Sbjct: 221 DQLKKLPIHKFKKGDEYDVCAICLDEYEDGDKLRILP-CSHAYHCKCVDPWLTKTKKTCP 279
Query: 114 VCRAKL 119
VC+ K+
Sbjct: 280 VCKQKV 285
>UNIPROTKB|F1S3A0 [details] [associations]
symbol:RNF44 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:CSAQQLP EMBL:FP101981
Ensembl:ENSSSCT00000015355 Uniprot:F1S3A0
Length = 437
Score = 143 (55.4 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 51 GLSASELDKLPKIS---GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL+ +++++LP T C VC + E+ Q R++P CNH FH +C D WL
Sbjct: 359 GLTKADIEQLPSYRFHPDSHQSEQTLCVVCFSDFEARQLLRVLP-CNHEFHTKCVDKWLK 417
Query: 108 KHSVCPVCRA 117
+ CP+CRA
Sbjct: 418 ANRTCPICRA 427
>UNIPROTKB|F1P629 [details] [associations]
symbol:RNF44 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:CSAQQLP EMBL:AAEX03002976
Ensembl:ENSCAFT00000026405 Uniprot:F1P629
Length = 441
Score = 143 (55.4 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 51 GLSASELDKLPKIS---GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL+ +++++LP T C VC + E+ Q R++P CNH FH +C D WL
Sbjct: 363 GLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLP-CNHEFHTKCVDKWLK 421
Query: 108 KHSVCPVCRA 117
+ CP+CRA
Sbjct: 422 ANRTCPICRA 431
>UNIPROTKB|E1B8N1 [details] [associations]
symbol:LOC521092 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104290 EMBL:DAAA02073830 IPI:IPI00696540
Ensembl:ENSBTAT00000026322 OMA:PICITEY Uniprot:E1B8N1
Length = 621
Score = 145 (56.1 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 51 GLSASELDKLPKISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHS 110
GL+ +++ LP +E C +C+ E + R++P C+H +H QC D WL +H
Sbjct: 544 GLTKLQINSLPLRFFEEKDAAKTCPICITEYTTGNMLRILP-CSHEYHYQCIDQWLEEHP 602
Query: 111 VCPVCRAKLDSHF 123
CP+CRA + +F
Sbjct: 603 NCPICRAPVVDYF 615
>TAIR|locus:2131463 [details] [associations]
symbol:AT4G26400 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP] [GO:0000303 "response to
superoxide" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009743 "response to carbohydrate stimulus"
evidence=RCA] [GO:0009873 "ethylene mediated signaling pathway"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002687 GO:GO:0046872 GO:GO:0008270
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
OMA:RSADNGS HOGENOM:HOG000237766 EMBL:AY099807 EMBL:BT000305
EMBL:AK317517 IPI:IPI00548539 RefSeq:NP_194370.2 RefSeq:NP_849554.1
UniGene:At.45862 ProteinModelPortal:Q8L5Z3 SMR:Q8L5Z3 STRING:Q8L5Z3
EnsemblPlants:AT4G26400.1 EnsemblPlants:AT4G26400.2 GeneID:828746
KEGG:ath:AT4G26400 TAIR:At4g26400 InParanoid:Q8L5Z3
PhylomeDB:Q8L5Z3 ProtClustDB:CLSN2690330 Genevestigator:Q8L5Z3
Uniprot:Q8L5Z3
Length = 356
Score = 141 (54.7 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 50 GGLSASE--LDKLPKISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
G L A + +D LP + E + +C++CLD+ + A+ +P C H FH++C WL
Sbjct: 218 GSLPARKEVVDNLPTVKISESL---QCSICLDDFDKGSEAKEMP-CKHKFHIRCIVPWLE 273
Query: 108 KHSVCPVCRAKL 119
HS CPVCR +L
Sbjct: 274 LHSSCPVCRYEL 285
>TAIR|locus:2092231 [details] [associations]
symbol:AT3G19950 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 EMBL:AB025631 eggNOG:NOG235630 EMBL:AY095995
EMBL:BT000583 EMBL:AK118283 IPI:IPI00518387 RefSeq:NP_188629.1
UniGene:At.20941 ProteinModelPortal:Q8LPN7 SMR:Q8LPN7 IntAct:Q8LPN7
STRING:Q8LPN7 PaxDb:Q8LPN7 PRIDE:Q8LPN7 EnsemblPlants:AT3G19950.1
GeneID:821533 KEGG:ath:AT3G19950 TAIR:At3g19950
HOGENOM:HOG000237766 InParanoid:Q9LT14 OMA:CSNGFVE PhylomeDB:Q8LPN7
ProtClustDB:CLSN2719206 Genevestigator:Q8LPN7 Uniprot:Q8LPN7
Length = 328
Score = 140 (54.3 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 28/70 (40%), Positives = 39/70 (55%)
Query: 53 SASELDKLPKIS-GKELVMG--TECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKH 109
S S +D LP + K+++ +CAVC+DE E + +P C H FH C WL H
Sbjct: 192 SKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMP-CKHVFHQDCLLPWLELH 250
Query: 110 SVCPVCRAKL 119
+ CPVCR +L
Sbjct: 251 NSCPVCRFEL 260
>FB|FBgn0037653 [details] [associations]
symbol:CG11982 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:AE014297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 eggNOG:NOG235630 KO:K11982
EMBL:AY052007 RefSeq:NP_649859.1 UniGene:Dm.4413 SMR:Q9VHI7
IntAct:Q9VHI7 MINT:MINT-313564 EnsemblMetazoa:FBtr0081965
GeneID:41080 KEGG:dme:Dmel_CG11982 UCSC:CG11982-RA
FlyBase:FBgn0037653 InParanoid:Q9VHI7 OMA:EILISVA OrthoDB:EOG4B8GVJ
GenomeRNAi:41080 NextBio:822051 Uniprot:Q9VHI7
Length = 380
Score = 141 (54.7 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 24/70 (34%), Positives = 44/70 (62%)
Query: 52 LSASELDKLP--KISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKH 109
LSA ++++P +I+ +E+ +C++C D+ + ++ R +P C+H +H C WL+ H
Sbjct: 229 LSAQRINEIPNVQINAEEVNRKIQCSICWDDFKIDETVRKLP-CSHLYHENCIVPWLNLH 287
Query: 110 SVCPVCRAKL 119
S CP+CR L
Sbjct: 288 STCPICRKSL 297
>RGD|1307212 [details] [associations]
symbol:Rnf44 "ring finger protein 44" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1307212 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 HSSP:Q9H0F5
HOGENOM:HOG000231638 HOVERGEN:HBG059283 CTD:22838 OrthoDB:EOG498V0T
EMBL:BC098030 IPI:IPI00364712 RefSeq:NP_001019966.1
UniGene:Rn.21345 ProteinModelPortal:Q4V7B8 SMR:Q4V7B8
PhosphoSite:Q4V7B8 GeneID:361212 KEGG:rno:361212 UCSC:RGD:1307212
NextBio:675562 Genevestigator:Q4V7B8 Uniprot:Q4V7B8
Length = 350
Score = 140 (54.3 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 51 GLSASELDKLPKIS---GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL+ +++++LP T C VC + E Q R++P CNH FH +C D WL
Sbjct: 272 GLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLP-CNHEFHAKCVDKWLK 330
Query: 108 KHSVCPVCRA 117
+ CP+CRA
Sbjct: 331 ANRTCPICRA 340
>UNIPROTKB|Q4V7B8 [details] [associations]
symbol:Rnf44 "RING finger protein 44" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1307212 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 HSSP:Q9H0F5
HOGENOM:HOG000231638 HOVERGEN:HBG059283 CTD:22838 OrthoDB:EOG498V0T
EMBL:BC098030 IPI:IPI00364712 RefSeq:NP_001019966.1
UniGene:Rn.21345 ProteinModelPortal:Q4V7B8 SMR:Q4V7B8
PhosphoSite:Q4V7B8 GeneID:361212 KEGG:rno:361212 UCSC:RGD:1307212
NextBio:675562 Genevestigator:Q4V7B8 Uniprot:Q4V7B8
Length = 350
Score = 140 (54.3 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 51 GLSASELDKLPKIS---GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL+ +++++LP T C VC + E Q R++P CNH FH +C D WL
Sbjct: 272 GLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLP-CNHEFHAKCVDKWLK 330
Query: 108 KHSVCPVCRA 117
+ CP+CRA
Sbjct: 331 ANRTCPICRA 340
>UNIPROTKB|F1SDD6 [details] [associations]
symbol:F1SDD6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 EMBL:CU467072
Ensembl:ENSSSCT00000007331 OMA:HRANERS Uniprot:F1SDD6
Length = 231
Score = 135 (52.6 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 56 ELDKLPK--ISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCP 113
++ LP I+ +++ G EC VC ++ E+ R +P CNH FH C WL H CP
Sbjct: 135 KITSLPTVTITQEQVDKGLECPVCKEDYTVEEEVRQLP-CNHFFHSSCIVPWLELHDACP 193
Query: 114 VCRAKL 119
VCR L
Sbjct: 194 VCRKSL 199
>TAIR|locus:2148318 [details] [associations]
symbol:RDUF2 "RING and Domain of Unknown Function 1117 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0009414
"response to water deprivation" evidence=IMP] [GO:0009737 "response
to abscisic acid stimulus" evidence=IMP] [GO:0051865 "protein
autoubiquitination" evidence=IDA] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] [GO:0009873 "ethylene mediated
signaling pathway" evidence=RCA] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=RCA] [GO:0035556 "intracellular
signal transduction" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0009737 EMBL:CP002688
GO:GO:0046872 GO:GO:0009414 GO:GO:0008270 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
GO:GO:0051865 eggNOG:NOG246952 InterPro:IPR010543 Pfam:PF06547
EMBL:AY052711 EMBL:AY063719 IPI:IPI00527742 RefSeq:NP_568910.1
UniGene:At.9728 ProteinModelPortal:Q940T5 SMR:Q940T5 STRING:Q940T5
EnsemblPlants:AT5G59550.1 GeneID:836074 KEGG:ath:AT5G59550
OMA:TEVRSIN ProtClustDB:CLSN2685119 Genevestigator:Q940T5
Uniprot:Q940T5
Length = 407
Score = 141 (54.7 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 53 SASELDKLPKISGKELVMGTE--CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHS 110
S S ++ LP++ + +G+E CAVC + E+E AR +P C H FH C WLS +
Sbjct: 176 SKSAIESLPRVEISDCHIGSEANCAVCTEIFETETEAREMP-CKHLFHDDCIVPWLSIRN 234
Query: 111 VCPVCRAKLDS 121
CPVCR +L S
Sbjct: 235 SCPVCRFELPS 245
>WB|WBGene00019185 [details] [associations]
symbol:H10E21.5 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 eggNOG:NOG302028
GeneTree:ENSGT00700000104211 EMBL:FO080988 PIR:T33407
RefSeq:NP_497129.1 ProteinModelPortal:O76671 SMR:O76671
EnsemblMetazoa:H10E21.5 GeneID:175169 KEGG:cel:CELE_H10E21.5
UCSC:H10E21.5 CTD:175169 WormBase:H10E21.5 HOGENOM:HOG000020550
InParanoid:O76671 OMA:MCKNDIL NextBio:887044 Uniprot:O76671
Length = 473
Score = 142 (55.0 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 57 LDKLPKIS---GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCP 113
L ++P ++ G + ++CAVCLD + + RL+P C H +H C D WL +H CP
Sbjct: 207 LTRIPTMTITPGMTQELQSDCAVCLDPYQLQDVIRLLP-CKHIYHKSCIDPWLLEHRTCP 265
Query: 114 VCRAKLDSHF--FNALESD 130
+C+ + HF +N + +D
Sbjct: 266 MCKNDILKHFGYWNDIRND 284
>TAIR|locus:505006488 [details] [associations]
symbol:AT4G17245 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
HOGENOM:HOG000237642 ProtClustDB:CLSN2714317 EMBL:AY054245
EMBL:AF458337 IPI:IPI00532956 RefSeq:NP_567525.1 UniGene:At.26389
ProteinModelPortal:Q940N3 SMR:Q940N3 EnsemblPlants:AT4G17245.1
GeneID:827437 KEGG:ath:AT4G17245 TAIR:At4g17245 eggNOG:NOG246131
InParanoid:Q940N3 OMA:LERCKHG PhylomeDB:Q940N3
Genevestigator:Q940N3 Uniprot:Q940N3
Length = 166
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 73 ECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSK-HSVCPVCRAKLDS 121
EC +CL E + R++ C HGFH+ C WLS HS CP CR + S
Sbjct: 101 ECIICLSEFQDGDTLRVLERCKHGFHVYCIQKWLSSSHSSCPTCRTNIFS 150
>MGI|MGI:2145310 [details] [associations]
symbol:Rnf44 "ring finger protein 44" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 MGI:MGI:2145310
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 HSSP:Q9H0F5
GeneTree:ENSGT00670000097625 HOGENOM:HOG000231638
HOVERGEN:HBG059283 CTD:22838 ChiTaRS:RNF44 EMBL:AK129290
EMBL:AK147349 EMBL:AK160090 EMBL:AK160115 EMBL:AK171943
EMBL:BC017630 EMBL:BC035548 IPI:IPI00453833 IPI:IPI00828733
IPI:IPI00828814 RefSeq:NP_001139497.1 RefSeq:NP_001139498.1
RefSeq:NP_001139499.1 RefSeq:NP_598825.2 UniGene:Mm.25366
ProteinModelPortal:Q3UHJ8 SMR:Q3UHJ8 PhosphoSite:Q3UHJ8
PRIDE:Q3UHJ8 Ensembl:ENSMUST00000037422 Ensembl:ENSMUST00000128257
Ensembl:ENSMUST00000134862 Ensembl:ENSMUST00000150806
Ensembl:ENSMUST00000177950 GeneID:105239 KEGG:mmu:105239
UCSC:uc007qot.2 UCSC:uc007qou.2 UCSC:uc007qow.2 InParanoid:Q3UHJ8
NextBio:357544 Bgee:Q3UHJ8 CleanEx:MM_RNF44 Genevestigator:Q3UHJ8
Uniprot:Q3UHJ8
Length = 407
Score = 140 (54.3 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 51 GLSASELDKLPKIS---GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL+ +++++LP T C VC + E Q R++P CNH FH +C D WL
Sbjct: 329 GLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLP-CNHEFHAKCVDKWLK 387
Query: 108 KHSVCPVCRA 117
+ CP+CRA
Sbjct: 388 ANRTCPICRA 397
>TAIR|locus:2058465 [details] [associations]
symbol:RHC1A "RING-H2 finger C1A" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005618 "cell wall" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005618 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 EMBL:AC002409 eggNOG:NOG235630 KO:K11982
HOGENOM:HOG000237766 EMBL:AF079180 EMBL:AY139987 EMBL:BT008726
IPI:IPI00547663 PIR:T00747 RefSeq:NP_565942.1 RefSeq:NP_973651.1
RefSeq:NP_973652.1 UniGene:At.20405 ProteinModelPortal:O22197
SMR:O22197 PaxDb:O22197 EnsemblPlants:AT2G40830.1
EnsemblPlants:AT2G40830.2 EnsemblPlants:AT2G40830.3 GeneID:818680
KEGG:ath:AT2G40830 TAIR:At2g40830 InParanoid:O22197 OMA:IDAMPTV
PhylomeDB:O22197 ProtClustDB:CLSN2688851 ArrayExpress:O22197
Genevestigator:O22197 Uniprot:O22197
Length = 328
Score = 138 (53.6 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 30/70 (42%), Positives = 40/70 (57%)
Query: 55 SELDKLP--KISGKELVMG-TECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSV 111
S +D LP KI+ + L + C VC DE E A+ +P CNH +H C WL +H+
Sbjct: 168 SAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMP-CNHIYHSDCIVPWLVQHNS 226
Query: 112 CPVCRAKLDS 121
CPVCR +L S
Sbjct: 227 CPVCRQELPS 236
>SGD|S000000266 [details] [associations]
symbol:YBR062C "Protein of unknown function that interacts
with Msb2p" species:4932 "Saccharomyces cerevisiae" [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 SGD:S000000266 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 EMBL:BK006936 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:Z35931 PIR:S45920 RefSeq:NP_009618.2
ProteinModelPortal:P38239 SMR:P38239 MINT:MINT-2493203
STRING:P38239 EnsemblFungi:YBR062C GeneID:852354 KEGG:sce:YBR062C
CYGD:YBR062c eggNOG:NOG258882 HOGENOM:HOG000214894 OMA:LEEDWGM
OrthoDB:EOG4D2B07 NextBio:971110 Genevestigator:P38239
GermOnline:YBR062C Uniprot:P38239
Length = 180
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 60 LPKISGKELVMGTECAVCLDE-VESEQPARL-VPGCNHGFHLQCADSWLSKHSVCPVCRA 117
LP+I+ K+L C++C +E E P + +P C+H F L+C WLS+ + CP+CR
Sbjct: 95 LPRINKKKLKATDNCSICYTNYLEDEYPLVVELPHCHHKFDLECLSVWLSRSTTCPLCRD 154
Query: 118 KLDSH-FFNALES 129
+ H N +++
Sbjct: 155 NVMGHRIINEIDT 167
>TAIR|locus:2195871 [details] [associations]
symbol:AT1G51930 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BT015124 EMBL:BT015636
IPI:IPI00533509 RefSeq:NP_175605.1 UniGene:At.64866
ProteinModelPortal:Q6AWX4 SMR:Q6AWX4 EnsemblPlants:AT1G51930.1
GeneID:841621 KEGG:ath:AT1G51930 TAIR:At1g51930 eggNOG:NOG294426
HOGENOM:HOG000141530 InParanoid:Q6AWX4 OMA:EEYEDDH PhylomeDB:Q6AWX4
ProtClustDB:CLSN2914693 Genevestigator:Q6AWX4 Uniprot:Q6AWX4
Length = 132
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 74 CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKLD 120
C +CL+E E + R + C H FHL C DSWL++ CP CR +D
Sbjct: 80 CPICLEEYEDDHQIRRLRNCGHVFHLLCIDSWLTQKQNCPSCRRSVD 126
>UNIPROTKB|Q9Y6U7 [details] [associations]
symbol:RNF215 "RING finger protein 215" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0016021 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:NOG260672 EMBL:AC004997 IPI:IPI00164063
RefSeq:NP_001017981.1 UniGene:Hs.592194 ProteinModelPortal:Q9Y6U7
SMR:Q9Y6U7 DMDM:147732500 PRIDE:Q9Y6U7 DNASU:200312
Ensembl:ENST00000382363 GeneID:200312 KEGG:hsa:200312
UCSC:uc003ahp.3 CTD:200312 GeneCards:GC22M030773 H-InvDB:HIX0041363
HGNC:HGNC:33434 HPA:HPA019262 neXtProt:NX_Q9Y6U7
PharmGKB:PA162401807 HOGENOM:HOG000154164 HOVERGEN:HBG080631
InParanoid:Q9Y6U7 OMA:EAPVEGW GenomeRNAi:200312 NextBio:89883
ArrayExpress:Q9Y6U7 Bgee:Q9Y6U7 CleanEx:HS_RNF215
Genevestigator:Q9Y6U7 Uniprot:Q9Y6U7
Length = 377
Score = 119 (46.9 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 71 GTE-CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCR 116
G E CAVCLD ++Q R++P C H FH C D WL CP+C+
Sbjct: 321 GAETCAVCLDYFCNKQWLRVLP-CKHEFHRDCVDPWLMLQQTCPLCK 366
Score = 40 (19.1 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 13/46 (28%), Positives = 19/46 (41%)
Query: 18 LVFIVYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELD-KLPK 62
L+ ++ L LW D P A GG A +D +LP+
Sbjct: 23 LLLLLPLLPLWLGLAGPGAAADGSEPAAGAGRGGARAVRVDVRLPR 68
>RGD|1594062 [details] [associations]
symbol:Rnf13 "ring finger protein 13" species:10116 "Rattus
norvegicus" [GO:0000139 "Golgi membrane" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0005637
"nuclear inner membrane" evidence=IEA] [GO:0005765 "lysosomal
membrane" evidence=ISO;ISS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=ISO;ISS] [GO:0051865
"protein autoubiquitination" evidence=ISO;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 RGD:1594062 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0000139 GO:GO:0031902 GO:GO:0005765
GO:GO:0005789 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0051865
GO:GO:0005637 HOVERGEN:HBG063762 CTD:11342 KO:K15692 EMBL:BC081881
IPI:IPI00471874 RefSeq:NP_001102914.1 UniGene:Rn.17153
ProteinModelPortal:Q66HG0 GeneID:681578 KEGG:rno:681578
UCSC:RGD:1594062 NextBio:721179 Genevestigator:Q66HG0
Uniprot:Q66HG0
Length = 380
Score = 139 (54.0 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 58 DKLPKISGKELVMGTE---CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSK-HSVCP 113
D+L K+ + G E CA+CL+E E R++P C+H +H +C D WL+K CP
Sbjct: 221 DQLKKLPVHKFKKGDEYDVCAICLEEYEDGDKLRILP-CSHAYHCKCVDPWLTKTKKTCP 279
Query: 114 VCRAKL 119
VC+ K+
Sbjct: 280 VCKQKV 285
>MGI|MGI:1346341 [details] [associations]
symbol:Rnf13 "ring finger protein 13" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0005765 "lysosomal membrane" evidence=IDA] [GO:0005768
"endosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IDA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 MGI:MGI:1346341 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0005829 GO:GO:0031902 GO:GO:0005765
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0051865 GO:GO:0005637 EMBL:CH466530
GeneTree:ENSGT00700000104226 HOGENOM:HOG000234362
HOVERGEN:HBG063762 CTD:11342 KO:K15692 OMA:MGSNDID
OrthoDB:EOG41NTMB EMBL:AF037205 EMBL:AF037206 EMBL:AK158046
EMBL:BC058182 IPI:IPI00119961 IPI:IPI00420831 RefSeq:NP_001106884.1
RefSeq:NP_036013.1 UniGene:Mm.274360 ProteinModelPortal:O54965
SMR:O54965 PhosphoSite:O54965 PRIDE:O54965
Ensembl:ENSMUST00000041826 GeneID:24017 KEGG:mmu:24017
eggNOG:NOG260066 InParanoid:Q6PEA8 NextBio:303955 Bgee:O54965
CleanEx:MM_RNF13 Genevestigator:O54965
GermOnline:ENSMUSG00000036503 Uniprot:O54965
Length = 381
Score = 139 (54.0 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 58 DKLPKISGKELVMGTE---CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSK-HSVCP 113
D+L K+ + G E CA+CL+E E R++P C+H +H +C D WL+K CP
Sbjct: 221 DQLKKLPVHKFKKGDEYDVCAICLEEYEDGDKLRILP-CSHAYHCKCVDPWLTKTKKTCP 279
Query: 114 VCRAKL 119
VC+ K+
Sbjct: 280 VCKQKV 285
>TAIR|locus:2085914 [details] [associations]
symbol:AT3G18930 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009693 "ethylene biosynthetic process"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AP000735
EMBL:AY090932 EMBL:AY122920 EMBL:AY136452 EMBL:BT008506
EMBL:AK175597 EMBL:AK176482 IPI:IPI00518498 RefSeq:NP_188523.1
RefSeq:NP_974336.1 UniGene:At.38477 UniGene:At.63560
ProteinModelPortal:Q67YI6 SMR:Q67YI6 PaxDb:Q67YI6 PRIDE:Q67YI6
EnsemblPlants:AT3G18930.1 EnsemblPlants:AT3G18930.2 GeneID:821425
KEGG:ath:AT3G18930 TAIR:At3g18930 eggNOG:NOG315766
HOGENOM:HOG000034171 InParanoid:Q67YI6 OMA:TYSRLIS PhylomeDB:Q67YI6
ProtClustDB:CLSN2684543 Genevestigator:Q67YI6 GermOnline:AT3G18930
Uniprot:Q67YI6
Length = 411
Score = 139 (54.0 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 26/67 (38%), Positives = 33/67 (49%)
Query: 53 SASELDKLPKISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVC 112
SA+ P + +CAVCL E E R +P C H FHL+C D WL H C
Sbjct: 135 SAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNC 194
Query: 113 PVCRAKL 119
P+CR +
Sbjct: 195 PLCRTAI 201
>TAIR|locus:2199665 [details] [associations]
symbol:AT1G22670 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008233
"peptidase activity" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225 EMBL:CP002684
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0008233 KO:K15692 IPI:IPI00539695
RefSeq:NP_173681.1 UniGene:At.51727 ProteinModelPortal:F4I2Y3
SMR:F4I2Y3 PRIDE:F4I2Y3 EnsemblPlants:AT1G22670.1 GeneID:838873
KEGG:ath:AT1G22670 OMA:NYTANTF Uniprot:F4I2Y3
Length = 422
Score = 139 (54.0 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 36/116 (31%), Positives = 60/116 (51%)
Query: 3 VSVILALFLPCAGMSLVFIV-YLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELDKLP 61
+++IL+L + C ++ VF Y S + ++ + NG R VKA + +++D
Sbjct: 171 IALILSLAIFCVMVTCVFFYRYCSTI--RNSTSQFNGMCRRTVKAMPSVTFTCAKIDN-- 226
Query: 62 KISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWL-SKHSVCPVCR 116
G CA+CL++ R++P C+H FH+ C DSWL S + CPVC+
Sbjct: 227 -------TTGFSCAICLEDYIVGDKLRVLP-CSHKFHVACVDSWLISWRTFCPVCK 274
>UNIPROTKB|E1BCM3 [details] [associations]
symbol:RNF215 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
OMA:EAPVEGW GeneTree:ENSGT00530000063291 EMBL:DAAA02045619
IPI:IPI00710402 Ensembl:ENSBTAT00000004400 Uniprot:E1BCM3
Length = 379
Score = 119 (46.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 71 GTE-CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCR 116
G E CAVCLD ++Q R++P C H FH C D WL CP+C+
Sbjct: 323 GAETCAVCLDYFCNKQWLRVLP-CKHEFHRDCVDPWLMLQQTCPLCK 368
Score = 39 (18.8 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 13/46 (28%), Positives = 19/46 (41%)
Query: 18 LVFIVYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELD-KLPK 62
L+ ++ L LW D P A GG A +D +LP+
Sbjct: 26 LLLLLPLLPLWLGLAGPGAAADGGEPAAGAGRGGARAVRVDVRLPR 71
>UNIPROTKB|F6RQU6 [details] [associations]
symbol:RNF115 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051865 "protein autoubiquitination" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0005829 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0051865
GeneTree:ENSGT00530000062967 OMA:STHFAEF EMBL:DAAA02007325
IPI:IPI00691430 Ensembl:ENSBTAT00000010691 Uniprot:F6RQU6
Length = 293
Score = 135 (52.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 56 ELDKLPKIS--GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCP 113
++ LP ++ +++ G EC VC ++ E+ R +P CNH FH C WL H CP
Sbjct: 197 KITSLPTVTVTQEQVDKGLECPVCKEDYTVEEEVRQLP-CNHYFHSSCIVPWLELHDACP 255
Query: 114 VCRAKLD 120
VCR L+
Sbjct: 256 VCRKSLN 262
>UNIPROTKB|I3LDQ5 [details] [associations]
symbol:LOC100739432 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 KO:K11982 OMA:STHFAEF EMBL:CU606940
RefSeq:XP_003481520.1 Ensembl:ENSSSCT00000023878 GeneID:100739432
KEGG:ssc:100739432 Uniprot:I3LDQ5
Length = 293
Score = 135 (52.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 56 ELDKLPK--ISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCP 113
++ LP I+ +++ G EC VC ++ E+ R +P CNH FH C WL H CP
Sbjct: 197 KITSLPTVTITQEQVDKGLECPVCKEDYTVEEEVRQLP-CNHFFHSSCIVPWLELHDACP 255
Query: 114 VCRAKL 119
VCR L
Sbjct: 256 VCRKSL 261
>TAIR|locus:1006230395 [details] [associations]
symbol:AT4G24015 "AT4G24015" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL078468
HOGENOM:HOG000006232 UniGene:At.32387 EMBL:AF079178 EMBL:BT005844
IPI:IPI00523532 PIR:T51850 RefSeq:NP_974604.1
ProteinModelPortal:Q84TF5 SMR:Q84TF5 EnsemblPlants:AT4G24015.1
GeneID:2745724 KEGG:ath:AT4G24015 TAIR:At4g24015 eggNOG:NOG268148
InParanoid:Q84TF5 OMA:TPHLYPQ PhylomeDB:Q84TF5
ProtClustDB:CLSN2713511 Genevestigator:Q84TF5 Uniprot:Q84TF5
Length = 174
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 29/78 (37%), Positives = 41/78 (52%)
Query: 58 DKLPKISGKELVMGTE---CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPV 114
DKL + E +GT C VCL E E ++ +P C H FHL C WL H+ CP+
Sbjct: 87 DKLHVVLFNE-ELGTRDSLCCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPL 145
Query: 115 CRAKLD-SHFFNALESDN 131
CR+ + S +++ DN
Sbjct: 146 CRSSVSISSTKTSVDDDN 163
>TAIR|locus:2144088 [details] [associations]
symbol:AT5G06490 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
EMBL:AP002543 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237642 IPI:IPI00540295 RefSeq:NP_196267.1
UniGene:At.65493 ProteinModelPortal:Q9FG21 SMR:Q9FG21
EnsemblPlants:AT5G06490.1 GeneID:830537 KEGG:ath:AT5G06490
TAIR:At5g06490 eggNOG:NOG316846 InParanoid:Q9FG21 OMA:CTRSHIS
PhylomeDB:Q9FG21 ProtClustDB:CLSN2916514 Genevestigator:Q9FG21
GermOnline:AT5G06490 Uniprot:Q9FG21
Length = 197
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 74 CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCR 116
C++CL + + R++P CNH FH C D WL H CPVCR
Sbjct: 129 CSICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCR 171
>WB|WBGene00021795 [details] [associations]
symbol:Y52E8A.2 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00530000064787 EMBL:FO080259
RefSeq:NP_494760.1 ProteinModelPortal:Q9N3H6 SMR:Q9N3H6
IntAct:Q9N3H6 STRING:Q9N3H6 EnsemblMetazoa:Y52E8A.2 GeneID:173765
KEGG:cel:CELE_Y52E8A.2 UCSC:Y52E8A.2 CTD:173765 WormBase:Y52E8A.2
eggNOG:nemNOG12858 InParanoid:Q9N3H6 OMA:INAVNSH NextBio:880997
Uniprot:Q9N3H6
Length = 192
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 31/93 (33%), Positives = 41/93 (44%)
Query: 37 NGDVRLPVKAAAE-GGLSASELDKLPKISGKELVMGTECAVCLDEVESEQPARLVPGCNH 95
NG +L ++E G + + S EL C +CLD+V S + C
Sbjct: 101 NGAEKLKASTSSEKGSIPSVSFSSSISSSSAEL-SDARCLICLDDVISTEKTIKCNSCRR 159
Query: 96 GFHLQCADSWLSKHSVCPVC-RAKLDSHFFNAL 127
FHL CA W + SVCP C R LD F +L
Sbjct: 160 RFHLDCASQWFKEKSVCPACNRGMLDPTEFPSL 192
>UNIPROTKB|Q9N3H6 [details] [associations]
symbol:Y52E8A.2 "Protein Y52E8A.2" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR001965 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000064787 EMBL:FO080259 RefSeq:NP_494760.1
ProteinModelPortal:Q9N3H6 SMR:Q9N3H6 IntAct:Q9N3H6 STRING:Q9N3H6
EnsemblMetazoa:Y52E8A.2 GeneID:173765 KEGG:cel:CELE_Y52E8A.2
UCSC:Y52E8A.2 CTD:173765 WormBase:Y52E8A.2 eggNOG:nemNOG12858
InParanoid:Q9N3H6 OMA:INAVNSH NextBio:880997 Uniprot:Q9N3H6
Length = 192
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 31/93 (33%), Positives = 41/93 (44%)
Query: 37 NGDVRLPVKAAAE-GGLSASELDKLPKISGKELVMGTECAVCLDEVESEQPARLVPGCNH 95
NG +L ++E G + + S EL C +CLD+V S + C
Sbjct: 101 NGAEKLKASTSSEKGSIPSVSFSSSISSSSAEL-SDARCLICLDDVISTEKTIKCNSCRR 159
Query: 96 GFHLQCADSWLSKHSVCPVC-RAKLDSHFFNAL 127
FHL CA W + SVCP C R LD F +L
Sbjct: 160 RFHLDCASQWFKEKSVCPACNRGMLDPTEFPSL 192
>ZFIN|ZDB-GENE-030616-560 [details] [associations]
symbol:si:dkey-51a16.9 "si:dkey-51a16.9"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-030616-560 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
EMBL:BX530079 IPI:IPI00882963 Ensembl:ENSDART00000057687
ArrayExpress:F1Q9J1 Bgee:F1Q9J1 Uniprot:F1Q9J1
Length = 155
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 65 GKEL-VMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVC 115
GK+L ++G CAVCL+E S + P C+H FH +C WL SVCP+C
Sbjct: 81 GKKLSLLGQTCAVCLEEFRSRDELGVCP-CSHAFHKKCLVKWLEIRSVCPMC 131
>GENEDB_PFALCIPARUM|PF10_0276 [details] [associations]
symbol:PF10_0276 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AE014185 HSSP:P28990
RefSeq:XP_001347560.1 ProteinModelPortal:Q8IJC2
EnsemblProtists:PF10_0276:mRNA GeneID:810433 KEGG:pfa:PF10_0276
EuPathDB:PlasmoDB:PF3D7_1028200 HOGENOM:HOG000284583 OMA:LENDEVM
ProtClustDB:CLSZ2429151 Uniprot:Q8IJC2
Length = 274
Score = 134 (52.2 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 51 GLSASELDKLPKISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHS 110
GL +++ LP K + ++C++CL++ + ++ R + CNH FH C D WL + +
Sbjct: 197 GLRLKQIENLPFYYIKNISNESKCSICLNDFQIDECVRTLLLCNHTFHKSCIDLWLIRSA 256
Query: 111 VCPVCRAKLDSH--FFN 125
CP C++ + S F N
Sbjct: 257 TCPNCKSPIASQGIFMN 273
>UNIPROTKB|Q8IJC2 [details] [associations]
symbol:PF10_0276 "Zinc finger, C3HC4 type, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AE014185 HSSP:P28990
RefSeq:XP_001347560.1 ProteinModelPortal:Q8IJC2
EnsemblProtists:PF10_0276:mRNA GeneID:810433 KEGG:pfa:PF10_0276
EuPathDB:PlasmoDB:PF3D7_1028200 HOGENOM:HOG000284583 OMA:LENDEVM
ProtClustDB:CLSZ2429151 Uniprot:Q8IJC2
Length = 274
Score = 134 (52.2 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 51 GLSASELDKLPKISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHS 110
GL +++ LP K + ++C++CL++ + ++ R + CNH FH C D WL + +
Sbjct: 197 GLRLKQIENLPFYYIKNISNESKCSICLNDFQIDECVRTLLLCNHTFHKSCIDLWLIRSA 256
Query: 111 VCPVCRAKLDSH--FFN 125
CP C++ + S F N
Sbjct: 257 TCPNCKSPIASQGIFMN 273
>UNIPROTKB|F1PK72 [details] [associations]
symbol:AMFR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051259 "protein oligomerization"
evidence=IEA] [GO:0030968 "endoplasmic reticulum unfolded protein
response" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0030176 "integral to
endoplasmic reticulum membrane" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003892 InterPro:IPR026608
Pfam:PF02845 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51140
SMART:SM00184 SMART:SM00546 GO:GO:0051259 GO:GO:0046872
GO:GO:0008270 GO:GO:0030176 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030433 GO:GO:0004842 OMA:YTDFIME GO:GO:0030968 GO:GO:0000209
PANTHER:PTHR12477:SF4 GeneTree:ENSGT00530000062938
EMBL:AAEX03001585 Ensembl:ENSCAFT00000014581 Uniprot:F1PK72
Length = 560
Score = 116 (45.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 26/66 (39%), Positives = 35/66 (53%)
Query: 66 KELVMGTE-CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKLDSHFF 124
+EL + + CA+C D S Q AR +P C H FH C SWL + + CP CR L+
Sbjct: 247 EELAVNNDDCAICWD---SMQAARKLP-CGHLFHNSCLRSWLEQDTSCPTCRMSLNIADN 302
Query: 125 NALESD 130
N + D
Sbjct: 303 NRVRED 308
Score = 46 (21.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 7/21 (33%), Positives = 16/21 (76%)
Query: 2 IVSVILALFLPCAGMSLVFIV 22
++S+++A+ L C G+++V V
Sbjct: 101 VLSLLIAMLLSCCGLAVVCCV 121
>TAIR|locus:2177881 [details] [associations]
symbol:AT5G41350 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006914 "autophagy" evidence=RCA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005739 EMBL:CP002688 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 ProtClustDB:CLSN2697998
EMBL:AY048293 EMBL:AY143828 IPI:IPI00528415 RefSeq:NP_568590.1
UniGene:At.6481 ProteinModelPortal:Q94AB7 SMR:Q94AB7 IntAct:Q94AB7
PRIDE:Q94AB7 EnsemblPlants:AT5G41350.1 GeneID:834137
KEGG:ath:AT5G41350 TAIR:At5g41350 eggNOG:NOG314203
InParanoid:Q94AB7 OMA:AYYYYPR PhylomeDB:Q94AB7
Genevestigator:Q94AB7 Uniprot:Q94AB7
Length = 212
Score = 130 (50.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 53 SASELD-KLPKISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSV 111
S E+D KL K + +C +CL+E + E P +LV C+H FHL C W+ +
Sbjct: 139 STEEIDPKLSKAVFIPIEEEEDCPICLEEYDIENP-KLVAKCDHHFHLACILEWMERSET 197
Query: 112 CPVCRAKL 119
CPVC ++
Sbjct: 198 CPVCNKEM 205
>ASPGD|ASPL0000007389 [details] [associations]
symbol:AN10792 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 EMBL:BN001301
Gene3D:3.30.40.10 InterPro:IPR013083 EnsemblFungi:CADANIAT00006770
HOGENOM:HOG000165365 OMA:ADHNPWA Uniprot:C8V1R9
Length = 439
Score = 138 (53.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 71 GTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKLD 120
GTEC++C+D V+ ++P C H FH QC + WL++H+ CP CR +D
Sbjct: 313 GTECSICMDAVKVGDEVTVLP-CTHWFHPQCIELWLNQHNSCPHCRRGVD 361
>MGI|MGI:1915095 [details] [associations]
symbol:Rnf115 "ring finger protein 115" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=ISO] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1915095 Prosite:PS00518
GO:GO:0005829 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0051865
GeneTree:ENSGT00530000062967 CTD:27246 eggNOG:NOG235630
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 OMA:STHFAEF
OrthoDB:EOG4VX262 EMBL:AK008329 EMBL:AK011584 EMBL:BC023113
IPI:IPI00177287 RefSeq:NP_080682.3 UniGene:Mm.386792
ProteinModelPortal:Q9D0C1 SMR:Q9D0C1 IntAct:Q9D0C1 MINT:MINT-217430
STRING:Q9D0C1 PhosphoSite:Q9D0C1 PRIDE:Q9D0C1
Ensembl:ENSMUST00000029740 GeneID:67845 KEGG:mmu:67845
UCSC:uc008qoe.2 InParanoid:Q9D0C1 NextBio:325695 Bgee:Q9D0C1
Genevestigator:Q9D0C1 GermOnline:ENSMUSG00000028098 Uniprot:Q9D0C1
Length = 305
Score = 135 (52.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 56 ELDKLPKIS--GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCP 113
++ LP ++ +++ G EC VC ++ E+ R +P CNH FH C WL H CP
Sbjct: 209 KITSLPTVTVTQEQVNTGLECPVCKEDYTVEEKVRQLP-CNHFFHSSCIVPWLELHDTCP 267
Query: 114 VCRAKLD 120
VCR L+
Sbjct: 268 VCRKSLN 274
>TAIR|locus:2156872 [details] [associations]
symbol:RMR1 "receptor homology region transmembrane
domain ring H2 motif protein 1" species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008233
"peptidase activity" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0000306 "extrinsic to vacuolar membrane"
evidence=IDA] [GO:0006886 "intracellular protein transport"
evidence=IDA] [GO:0006869 "lipid transport" evidence=RCA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
[GO:0010351 "lithium ion transport" evidence=RCA] [GO:0016558
"protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 EMBL:CP002688 GO:GO:0006886
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 EMBL:AB011474 GO:GO:0000306 KO:K15692 UniGene:At.24500
HOGENOM:HOG000242534 EMBL:AF218807 EMBL:AY035089 EMBL:AY051036
IPI:IPI00521373 RefSeq:NP_201417.1 UniGene:At.67847 UniGene:At.9220
ProteinModelPortal:Q9M622 SMR:Q9M622 EnsemblPlants:AT5G66160.1
GeneID:836748 KEGG:ath:AT5G66160 TAIR:At5g66160 InParanoid:Q9M622
OMA:EDYKDGE PhylomeDB:Q9M622 ProtClustDB:CLSN2686674
ArrayExpress:Q9M622 Genevestigator:Q9M622 Uniprot:Q9M622
Length = 310
Score = 134 (52.2 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 71 GTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSV-CPVCR 116
G CA+CL++ + RL+P C H FHL C DSWL+K CPVC+
Sbjct: 229 GETCAICLEDYRFGESLRLLP-CQHAFHLNCIDSWLTKWGTSCPVCK 274
>ZFIN|ZDB-GENE-040426-1024 [details] [associations]
symbol:rnf181 "ring finger protein 181"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 ZFIN:ZDB-GENE-040426-1024 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 eggNOG:COG5540
GeneTree:ENSGT00530000062967 CTD:51255 HOGENOM:HOG000031081
HOVERGEN:HBG108412 OMA:EEQYRQN OrthoDB:EOG40VVQW EMBL:CU041374
EMBL:BC050161 IPI:IPI00492404 IPI:IPI00890554 RefSeq:NP_956600.1
UniGene:Dr.84789 ProteinModelPortal:Q7ZW78 STRING:Q7ZW78
Ensembl:ENSDART00000029450 Ensembl:ENSDART00000134728
Ensembl:ENSDART00000140392 GeneID:393276 KEGG:dre:393276
InParanoid:Q7ZW78 NextBio:20814333 Bgee:Q7ZW78 Uniprot:Q7ZW78
Length = 156
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 32/83 (38%), Positives = 44/83 (53%)
Query: 39 DVRLPVKAAAEGGLSASELDKLPK--ISGKELVMGTECAVCLDEVESEQPARLVPGCNHG 96
D RLP AA + + LP IS ++ G +C VCL E E ++ R +P C H
Sbjct: 48 DQRLPPPAAK------AVVQSLPVVIISPEQADKGVKCPVCLLEFEEQESVREMP-CKHL 100
Query: 97 FHLQCADSWLSKHSVCPVCRAKL 119
FH C WL+K + CP+CR +L
Sbjct: 101 FHTGCILPWLNKTNSCPLCRLEL 123
>UNIPROTKB|F1NBB7 [details] [associations]
symbol:AMFR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0030176 "integral to
endoplasmic reticulum membrane" evidence=IEA] [GO:0030433
"ER-associated protein catabolic process" evidence=IEA] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=IEA]
[GO:0051259 "protein oligomerization" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003892 InterPro:IPR026608
Pfam:PF02845 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51140
SMART:SM00184 SMART:SM00546 GO:GO:0051259 GO:GO:0046872
GO:GO:0008270 GO:GO:0030176 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030433 GO:GO:0004842 OMA:YTDFIME GO:GO:0030968 GO:GO:0000209
PANTHER:PTHR12477:SF4 GeneTree:ENSGT00530000062938
EMBL:AADN02051556 EMBL:AADN02051557 IPI:IPI00586421
Ensembl:ENSGALT00000004906 Uniprot:F1NBB7
Length = 559
Score = 119 (46.9 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 66 KELVMGTE-CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL---DS 121
+EL + + CA+C D ++S AR +P C H FH C SWL + + CP CR L DS
Sbjct: 248 EELAVNNDDCAICWDSMQS---ARKLP-CGHLFHNSCLRSWLEQDTSCPTCRMSLNITDS 303
Query: 122 H 122
H
Sbjct: 304 H 304
Score = 41 (19.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 5/18 (27%), Positives = 15/18 (83%)
Query: 2 IVSVILALFLPCAGMSLV 19
++++++A+ L C G+++V
Sbjct: 102 VLTLLVAMLLSCCGLAVV 119
>UNIPROTKB|I3LA46 [details] [associations]
symbol:I3LA46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000063291 Ensembl:ENSSSCT00000026758 OMA:ITILMIF
Uniprot:I3LA46
Length = 218
Score = 129 (50.5 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 31/117 (26%), Positives = 56/117 (47%)
Query: 3 VSVILALFLPCAGMSLVFIVYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELDKLPK 62
+ + LA F+ + + L+ +V + L S ++ N V+ K S S+ +
Sbjct: 28 MGIFLAFFVVVSLVCLILLVKIKLKQRRSQNSMNRLAVQALEKMETRKFNSKSKGRREGS 87
Query: 63 ISGKELVMGT---ECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCR 116
+ + + +CA+CL++ + R++P C H FH +C D WL +H CP CR
Sbjct: 88 CGALDTLSSSSTSDCAICLEKYIDGEELRVIP-CTHRFHRKCVDPWLLQHHTCPHCR 143
>UNIPROTKB|D4A8S6 [details] [associations]
symbol:Rlim "Protein Rlim" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1559832 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 IPI:IPI00947970 Ensembl:ENSRNOT00000067009
ArrayExpress:D4A8S6 Uniprot:D4A8S6
Length = 597
Score = 138 (53.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 51 GLSASELDKLPKIS-GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKH 109
GL+ ++D L S G+ + T C+VC+ E R +P C+H +H+ C D WLS++
Sbjct: 520 GLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSEN 577
Query: 110 SVCPVCR-AKLDS 121
S CP+CR A L S
Sbjct: 578 STCPICRRAVLSS 590
>MGI|MGI:1342291 [details] [associations]
symbol:Rlim "ring finger protein, LIM domain interacting"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IGI] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0060816 "random inactivation of X
chromosome" evidence=ISO;IDA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1342291
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0000122 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433 eggNOG:COG5540
GO:GO:0004842 EMBL:CH466564 KO:K16271 GeneTree:ENSGT00700000104290
CTD:51132 HOGENOM:HOG000273881 OrthoDB:EOG48SGSW GO:GO:0060816
EMBL:AF069992 EMBL:AK013207 EMBL:AK029295 EMBL:AL805911
EMBL:BC012960 IPI:IPI00123915 RefSeq:NP_035406.3 UniGene:Mm.427762
UniGene:Mm.490660 ProteinModelPortal:Q9WTV7 SMR:Q9WTV7
DIP:DIP-46445N STRING:Q9WTV7 PhosphoSite:Q9WTV7 PRIDE:Q9WTV7
Ensembl:ENSMUST00000070705 Ensembl:ENSMUST00000121153 GeneID:19820
KEGG:mmu:19820 UCSC:uc009tzz.1 InParanoid:Q9CYY2 NextBio:297281
Bgee:Q9WTV7 CleanEx:MM_RNF12 Genevestigator:Q9WTV7
GermOnline:ENSMUSG00000056537 Uniprot:Q9WTV7
Length = 600
Score = 138 (53.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 51 GLSASELDKLPKIS-GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKH 109
GL+ ++D L S G+ + T C+VC+ E R +P C+H +H+ C D WLS++
Sbjct: 523 GLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSEN 580
Query: 110 SVCPVCR-AKLDS 121
S CP+CR A L S
Sbjct: 581 STCPICRRAVLSS 593
>RGD|1559832 [details] [associations]
symbol:Rlim "ring finger protein, LIM domain interacting"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO] [GO:0060816 "random inactivation of
X chromosome" evidence=ISO] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 RGD:1559832 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433
eggNOG:COG5540 GO:GO:0004842 EMBL:CH473969 HOVERGEN:HBG009886
KO:K16271 GeneTree:ENSGT00700000104290 CTD:51132
HOGENOM:HOG000273881 OMA:RNFGESD OrthoDB:EOG48SGSW GO:GO:0060816
EMBL:BC097491 IPI:IPI00362010 RefSeq:NP_001020063.1
RefSeq:XP_003752129.1 UniGene:Rn.85539 Ensembl:ENSRNOT00000003782
GeneID:100910646 GeneID:317241 KEGG:rno:100910646 KEGG:rno:317241
UCSC:RGD:1559832 InParanoid:Q4V889 NextBio:671483
Genevestigator:Q4V889 Uniprot:Q4V889
Length = 603
Score = 138 (53.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 51 GLSASELDKLPKIS-GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKH 109
GL+ ++D L S G+ + T C+VC+ E R +P C+H +H+ C D WLS++
Sbjct: 526 GLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSEN 583
Query: 110 SVCPVCR-AKLDS 121
S CP+CR A L S
Sbjct: 584 STCPICRRAVLSS 596
>ZFIN|ZDB-GENE-100209-1 [details] [associations]
symbol:rnf6 "ring finger protein (C3H2C3 type) 6"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-100209-1 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104290
OMA:TIRIPLR EMBL:AL929009 IPI:IPI00902140
Ensembl:ENSDART00000109587 Uniprot:F1R4P2
Length = 734
Score = 139 (54.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 51 GLSASELDKL-PKISGK---ELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWL 106
GL+ ++D L + G+ E G C+VC++E R +P C H FH+ C D WL
Sbjct: 657 GLTKEQIDNLVTRTYGQVNLEGEQGRACSVCINEYAQGNKLRRLP-CAHEFHIHCIDRWL 715
Query: 107 SKHSVCPVCRAK-LDSH 122
S+++ CP+CR L SH
Sbjct: 716 SENNTCPICRQPILSSH 732
>TAIR|locus:2139717 [details] [associations]
symbol:AT4G11680 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005774 "vacuolar membrane" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005774
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL161532 HSSP:Q9LRB7 EMBL:AL049500 HOGENOM:HOG000240958
ProtClustDB:CLSN2682050 EMBL:DQ059121 EMBL:AY057713 EMBL:BT010750
IPI:IPI00525329 PIR:T04215 RefSeq:NP_567379.1 UniGene:At.20734
ProteinModelPortal:Q93Z92 SMR:Q93Z92 EnsemblPlants:AT4G11680.1
GeneID:826773 KEGG:ath:AT4G11680 GeneFarm:3078 TAIR:At4g11680
eggNOG:NOG288486 InParanoid:Q93Z92 OMA:HLEERQT PhylomeDB:Q93Z92
Genevestigator:Q93Z92 Uniprot:Q93Z92
Length = 390
Score = 119 (46.9 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 73 ECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCR 116
EC +CL E E R +P CNH FH C D WL +S CP+C+
Sbjct: 337 ECCICLCEYEDGVELRELP-CNHHFHCTCIDKWLHINSRCPLCK 379
Score = 36 (17.7 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 47 AAEGGLSASELDKLPK 62
A + G S +++D++PK
Sbjct: 283 ADQEGASKNDIDQMPK 298
>UNIPROTKB|K7GLM9 [details] [associations]
symbol:LOC100519887 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104211
EMBL:CU639394 Ensembl:ENSSSCT00000035144 Uniprot:K7GLM9
Length = 238
Score = 130 (50.8 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 74 CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
CAVC++ + R++P C H FH C D WLS+H CP+C+ +
Sbjct: 118 CAVCIESYKQNDVVRILP-CKHVFHKSCVDPWLSEHCTCPMCKLNI 162
>TAIR|locus:2193874 [details] [associations]
symbol:AT1G55530 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC005223
eggNOG:NOG235630 HOGENOM:HOG000237766 EMBL:AY039608 EMBL:AF424578
EMBL:BT000502 IPI:IPI00534528 PIR:F96597 RefSeq:NP_564693.1
UniGene:At.19898 ProteinModelPortal:Q9ZVU8 SMR:Q9ZVU8 STRING:Q9ZVU8
PRIDE:Q9ZVU8 EnsemblPlants:AT1G55530.1 GeneID:842000
KEGG:ath:AT1G55530 TAIR:At1g55530 InParanoid:Q9ZVU8 OMA:FVEEMED
PhylomeDB:Q9ZVU8 ProtClustDB:CLSN2917296 Genevestigator:Q9ZVU8
Uniprot:Q9ZVU8
Length = 351
Score = 134 (52.2 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 73 ECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
+C+VCLD+ E A+L+P C H FH C WL HS CPVCR +L
Sbjct: 222 QCSVCLDDFEIGTEAKLMP-CTHKFHSDCLLPWLELHSSCPVCRYQL 267
>RGD|1311551 [details] [associations]
symbol:Amfr "autocrine motility factor receptor, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO] [GO:0004872 "receptor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007568 "aging" evidence=IEP]
[GO:0007611 "learning or memory" evidence=IEP] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0030176 "integral to endoplasmic
reticulum membrane" evidence=ISO] [GO:0030425 "dendrite"
evidence=IDA] [GO:0030426 "growth cone" evidence=IDA] [GO:0030433
"ER-associated protein catabolic process" evidence=ISO] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0051259 "protein
oligomerization" evidence=ISO] InterPro:IPR001841
InterPro:IPR003892 InterPro:IPR026608 Pfam:PF02845 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS51140 SMART:SM00184 SMART:SM00546
RGD:1311551 GO:GO:0051259 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0007568 GO:GO:0043025 GO:GO:0030425 GO:GO:0008270
GO:GO:0030426 GO:GO:0007611 GO:GO:0030176 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0004842 OrthoDB:EOG4DJJW8
GO:GO:0030968 GO:GO:0000209 PANTHER:PTHR12477:SF4
GeneTree:ENSGT00530000062938 IPI:IPI00365150 PRIDE:D4ADJ6
Ensembl:ENSRNOT00000026340 UCSC:RGD:1311551 Uniprot:D4ADJ6
Length = 643
Score = 115 (45.5 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 24/58 (41%), Positives = 33/58 (56%)
Query: 64 SGKELVMGTE-CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKLD 120
+ +EL + + CA+C D S Q AR +P C H FH C SWL + + CP CR L+
Sbjct: 330 TAEELAVNNDDCAICWD---SMQAARKLP-CGHLFHNSCLRSWLEQDTSCPTCRMSLN 383
Score = 46 (21.3 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 7/21 (33%), Positives = 16/21 (76%)
Query: 2 IVSVILALFLPCAGMSLVFIV 22
++S+++A+ L C G+++V V
Sbjct: 186 VLSLLIAMLLSCCGLAVVCCV 206
>ZFIN|ZDB-GENE-080303-32 [details] [associations]
symbol:zgc:175214 "zgc:175214" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 ZFIN:ZDB-GENE-080303-32 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HOGENOM:HOG000004806
HOVERGEN:HBG058899 eggNOG:NOG262552 GeneTree:ENSGT00700000104226
EMBL:CR812943 EMBL:BC159258 IPI:IPI00481280 RefSeq:NP_001108199.1
UniGene:Dr.40552 SMR:B0JZN6 Ensembl:ENSDART00000030435
Ensembl:ENSDART00000137357 GeneID:557610 KEGG:dre:557610
NextBio:20882066 Uniprot:B0JZN6
Length = 155
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 62 KISGKEL-VMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVC 115
K +GK+L ++G CAVCL+E ++ + P C+H FH +C WL SVCP+C
Sbjct: 77 KGAGKKLSLLGQPCAVCLEEFKTRDELGVCP-CSHTFHKKCLLKWLEIRSVCPMC 130
>UNIPROTKB|Q9Y252 [details] [associations]
symbol:RNF6 "E3 ubiquitin-protein ligase RNF6" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0044314 "protein K27-linked ubiquitination"
evidence=IDA] [GO:0070936 "protein K48-linked ubiquitination"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0030517 "negative regulation of axon
extension" evidence=ISS] [GO:0030424 "axon" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=IPI] [GO:0085020
"protein K6-linked ubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0005737 Reactome:REACT_6900 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0016605 EMBL:CH471075
GO:GO:0030424 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 eggNOG:COG5540 GO:GO:0004842 GO:GO:0060765
GO:GO:0070936 GO:GO:0085020 GO:GO:0030517 MIM:133239 GO:GO:0044314
HOVERGEN:HBG009886 HOGENOM:HOG000273881 EMBL:AJ010347 EMBL:AJ010346
EMBL:AY009109 EMBL:AK312435 EMBL:AL138966 EMBL:BC034688
EMBL:AL133621 IPI:IPI00031752 PIR:T43459 RefSeq:NP_005968.1
RefSeq:NP_898864.1 RefSeq:NP_898865.1 UniGene:Hs.136885
ProteinModelPortal:Q9Y252 SMR:Q9Y252 IntAct:Q9Y252 STRING:Q9Y252
PhosphoSite:Q9Y252 DMDM:13124536 PRIDE:Q9Y252 DNASU:6049
Ensembl:ENST00000346166 Ensembl:ENST00000381570
Ensembl:ENST00000381588 GeneID:6049 KEGG:hsa:6049 UCSC:uc001uqo.3
CTD:6049 GeneCards:GC13M026706 HGNC:HGNC:10069 HPA:HPA040048
MIM:604242 neXtProt:NX_Q9Y252 PharmGKB:PA34443 InParanoid:Q9Y252
OMA:TIRIPLR OrthoDB:EOG4N04DD PhylomeDB:Q9Y252 GenomeRNAi:6049
NextBio:23569 ArrayExpress:Q9Y252 Bgee:Q9Y252 CleanEx:HS_RNF6
Genevestigator:Q9Y252 GermOnline:ENSG00000127870 Uniprot:Q9Y252
Length = 685
Score = 125 (49.1 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 51 GLSASELDKLP----KISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWL 106
GL+ ++D L + + + +G C+VC+ + + R +P C H FH+ C D WL
Sbjct: 605 GLTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLP-CMHEFHIHCIDRWL 663
Query: 107 SKHSVCPVCRAK-LDSHFFN 125
S++ CP+CR L S+ N
Sbjct: 664 SENCTCPICRQPVLGSNIAN 683
Score = 36 (17.7 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 28 WCA-SNDNDNNGDVRLPVK 45
W A S N NNG+ R ++
Sbjct: 134 WRAVSRTNPNNGEFRFSLE 152
>UNIPROTKB|E1C3B7 [details] [associations]
symbol:RNF130 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0012501 "programmed cell death" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0012501 GeneTree:ENSGT00700000104211
OMA:PLRTSGM EMBL:AADN02028617 EMBL:AADN02028618 IPI:IPI00574173
ProteinModelPortal:E1C3B7 Ensembl:ENSGALT00000009349
NextBio:20819763 Uniprot:E1C3B7
Length = 425
Score = 135 (52.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 32/121 (26%), Positives = 56/121 (46%)
Query: 1 MIVSVILALFLPCAGMSLVFIVYLSLLWCASNDNDNN--GDVRLPVKAAAEGGLSASELD 58
+ VS+ + + + L+F + + ++ D + GD K A G L+ +
Sbjct: 202 VFVSISFIVLMIISSAWLIFYFIQKIRYTSARDRNQRRLGDA---AKKAV-GKLTTRTVK 257
Query: 59 KLPKISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAK 118
K K + + CAVC++ + R++P C H FH C D WLS+H CP+C+
Sbjct: 258 KGDKETDPDF---DHCAVCIESYKQNDVVRILP-CKHVFHKACVDPWLSEHCTCPMCKLN 313
Query: 119 L 119
+
Sbjct: 314 I 314
>TAIR|locus:2101447 [details] [associations]
symbol:AT3G60080 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AL138658 EMBL:BT020239 EMBL:BT020570 EMBL:AK229330
IPI:IPI00527822 PIR:T47832 RefSeq:NP_191567.1 UniGene:At.34507
ProteinModelPortal:Q9M1D5 SMR:Q9M1D5 PRIDE:Q9M1D5
EnsemblPlants:AT3G60080.1 GeneID:825178 KEGG:ath:AT3G60080
TAIR:At3g60080 eggNOG:NOG323832 HOGENOM:HOG000153215
InParanoid:Q9M1D5 OMA:EPERRTY PhylomeDB:Q9M1D5
ProtClustDB:CLSN2685030 Genevestigator:Q9M1D5 Uniprot:Q9M1D5
Length = 306
Score = 132 (51.5 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 30/96 (31%), Positives = 50/96 (52%)
Query: 34 NDNNGDVRLPVKAAAEGGLSASELDKLPKIS-GKELVMGTE---------CAVCLDEVES 83
+DN+G +++ L +S++D +P I L+ T+ CAVC ++
Sbjct: 119 SDNSGSSSSSSSSSSSSLLKSSDIDSIPTIQISSSLLCSTDDSDPDSVLLCAVCKEDFII 178
Query: 84 EQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
+ AR +P C+H +H C WLS H+ CP+CR +L
Sbjct: 179 GESARRLP-CSHIYHSDCIVPWLSDHNSCPLCRFEL 213
>UNIPROTKB|Q9NVW2 [details] [associations]
symbol:RLIM "E3 ubiquitin-protein ligase RLIM" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=NAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0003714
"transcription corepressor activity" evidence=NAS] [GO:0060816
"random inactivation of X chromosome" evidence=IDA] [GO:0005634
"nucleus" evidence=ISS;IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0043433 eggNOG:COG5540 GO:GO:0004842
EMBL:CH471104 KO:K16271 EMBL:AF155109 EMBL:AJ271670 EMBL:AK001334
EMBL:AL513007 EMBL:BC013357 IPI:IPI00060628 RefSeq:NP_057204.2
RefSeq:NP_899196.1 UniGene:Hs.653288 ProteinModelPortal:Q9NVW2
SMR:Q9NVW2 IntAct:Q9NVW2 MINT:MINT-233446 STRING:Q9NVW2
PhosphoSite:Q9NVW2 DMDM:143811451 PaxDb:Q9NVW2 PRIDE:Q9NVW2
DNASU:51132 Ensembl:ENST00000332687 Ensembl:ENST00000349225
GeneID:51132 KEGG:hsa:51132 UCSC:uc004ebu.3 CTD:51132
GeneCards:GC0XM073803 HGNC:HGNC:13429 HPA:HPA018895 MIM:300379
neXtProt:NX_Q9NVW2 PharmGKB:PA164725373 HOGENOM:HOG000273881
InParanoid:Q9NVW2 OMA:RNFGESD OrthoDB:EOG48SGSW PhylomeDB:Q9NVW2
ChiTaRS:RLIM GenomeRNAi:51132 NextBio:53967 Bgee:Q9NVW2
CleanEx:HS_RNF12 Genevestigator:Q9NVW2 GermOnline:ENSG00000131263
GO:GO:0060816 Uniprot:Q9NVW2
Length = 624
Score = 137 (53.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 51 GLSASELDKLPKIS-GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKH 109
GL+ ++D L S G+ + T C+VC+ E R +P C+H +H+ C D WLS++
Sbjct: 547 GLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSEN 604
Query: 110 SVCPVCR 116
S CP+CR
Sbjct: 605 STCPICR 611
>UNIPROTKB|E2RSZ0 [details] [associations]
symbol:RLIM "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060816 "random inactivation of X chromosome"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433
GO:GO:0004842 KO:K16271 GeneTree:ENSGT00700000104290 CTD:51132
OMA:RNFGESD GO:GO:0060816 EMBL:AAEX03026523 RefSeq:XP_859444.2
ProteinModelPortal:E2RSZ0 Ensembl:ENSCAFT00000027241 GeneID:491965
KEGG:cfa:491965 NextBio:20864655 Uniprot:E2RSZ0
Length = 625
Score = 137 (53.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 51 GLSASELDKLPKIS-GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKH 109
GL+ ++D L S G+ + T C+VC+ E R +P C+H +H+ C D WLS++
Sbjct: 548 GLTKEQIDNLAMRSFGENDALKT-CSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSEN 605
Query: 110 SVCPVCR 116
S CP+CR
Sbjct: 606 STCPICR 612
>ZFIN|ZDB-GENE-070209-292 [details] [associations]
symbol:rnf126 "ring finger protein 126"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-070209-292
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 CTD:55658
OrthoDB:EOG4VQ9PZ EMBL:BC133164 IPI:IPI00833462
RefSeq:NP_001076486.1 UniGene:Dr.83792 ProteinModelPortal:A2RV40
SMR:A2RV40 PRIDE:A2RV40 GeneID:100009648 KEGG:dre:100009648
eggNOG:NOG304683 InParanoid:A2RV40 NextBio:20787826 Bgee:A2RV40
Uniprot:A2RV40
Length = 309
Score = 132 (51.5 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 56 ELDKLPKISGKE--LVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCP 113
++ LP + K+ + G EC VC ++ + + R +P CNH FH C WL +H CP
Sbjct: 206 KIKSLPTVQIKQEHVGAGLECPVCKEDYSAGENVRQLP-CNHLFHNDCIVPWLEQHDTCP 264
Query: 114 VCRAKL 119
VCR L
Sbjct: 265 VCRKSL 270
>MGI|MGI:1345634 [details] [associations]
symbol:Amfr "autocrine motility factor receptor"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0004872 "receptor activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009987 "cellular process" evidence=TAS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030176 "integral to endoplasmic reticulum membrane"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0030426
"growth cone" evidence=ISO] [GO:0030433 "ER-associated protein
catabolic process" evidence=ISO] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=ISO] [GO:0043025 "neuronal cell
body" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051259 "protein
oligomerization" evidence=ISO] InterPro:IPR001841
InterPro:IPR003892 InterPro:IPR026608 Pfam:PF02845 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS51140 SMART:SM00184 SMART:SM00546
UniPathway:UPA00143 MGI:MGI:1345634 Prosite:PS00518 GO:GO:0051259
GO:GO:0005634 GO:GO:0005887 GO:GO:0000166 GO:GO:0046872
GO:GO:0007568 GO:GO:0043025 GO:GO:0030425 GO:GO:0008270
GO:GO:0030426 GO:GO:0007611 GO:GO:0030176 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0004842 CTD:267
eggNOG:COG5243 HOGENOM:HOG000037436 HOVERGEN:HBG044694 KO:K10636
OMA:YTDFIME OrthoDB:EOG4DJJW8 ChiTaRS:AMFR GO:GO:0030968
GO:GO:0000209 PANTHER:PTHR12477:SF4 EMBL:AF124144 EMBL:BC003256
EMBL:BC034538 EMBL:BC040338 IPI:IPI00319880 IPI:IPI00351315
RefSeq:NP_035917.2 UniGene:Mm.34641 UniGene:Mm.490390
UniGene:Mm.490433 ProteinModelPortal:Q9R049 SMR:Q9R049
IntAct:Q9R049 STRING:Q9R049 PhosphoSite:Q9R049 PaxDb:Q9R049
PRIDE:Q9R049 Ensembl:ENSMUST00000053766 GeneID:23802 KEGG:mmu:23802
GeneTree:ENSGT00530000062938 InParanoid:Q9R049 NextBio:303423
Bgee:Q9R049 CleanEx:MM_AMFR Genevestigator:Q9R049
GermOnline:ENSMUSG00000031751 Uniprot:Q9R049
Length = 643
Score = 114 (45.2 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 24/56 (42%), Positives = 32/56 (57%)
Query: 66 KELVMGTE-CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKLD 120
+EL + + CA+C D S Q AR +P C H FH C SWL + + CP CR L+
Sbjct: 332 EELAVNNDDCAICWD---SMQAARKLP-CGHLFHNSCLRSWLEQDTSCPTCRMSLN 383
Score = 46 (21.3 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 7/21 (33%), Positives = 16/21 (76%)
Query: 2 IVSVILALFLPCAGMSLVFIV 22
++S+++A+ L C G+++V V
Sbjct: 186 VLSLLIAMLLSCCGLAVVCCV 206
>TAIR|locus:2034210 [details] [associations]
symbol:AT1G80400 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AC018848 eggNOG:NOG273848 HOGENOM:HOG000239557
ProtClustDB:CLSN2691130 EMBL:AY062845 EMBL:BT000070 EMBL:AK317002
IPI:IPI00535746 PIR:G96835 RefSeq:NP_178156.1 UniGene:At.19651
UniGene:At.48403 ProteinModelPortal:Q9C965 SMR:Q9C965
EnsemblPlants:AT1G80400.1 GeneID:844380 KEGG:ath:AT1G80400
TAIR:At1g80400 InParanoid:Q9C965 OMA:ELPCTHF PhylomeDB:Q9C965
ArrayExpress:Q9C965 Genevestigator:Q9C965 Uniprot:Q9C965
Length = 407
Score = 121 (47.7 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 49 EGGLSASELDKLPKISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSK 108
EGG K ISG++ C +CL ++ R +P C+H FH+ C D WL
Sbjct: 334 EGGFLLLGSQKKRLISGED----ASCCICLTRYGDDEQVRELP-CSHVFHVDCVDKWLKI 388
Query: 109 HSVCPVCR 116
++ CP+C+
Sbjct: 389 NATCPLCK 396
Score = 33 (16.7 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 6 ILALFLPCAGMSLVFIVYLSLLWC 29
I L C G ++ FI+ ++ C
Sbjct: 263 IAFLTFSCIGYAMPFILCATICCC 286
>TAIR|locus:1006230278 [details] [associations]
symbol:AT3G10815 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002686 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AY139990
EMBL:BT002592 IPI:IPI00537743 RefSeq:NP_974274.1 UniGene:At.63149
ProteinModelPortal:Q8L729 SMR:Q8L729 PRIDE:Q8L729
EnsemblPlants:AT3G10815.1 GeneID:2745878 KEGG:ath:AT3G10815
TAIR:At3g10815 InParanoid:Q8L729 OMA:MESVWCH PhylomeDB:Q8L729
Genevestigator:Q8L729 Uniprot:Q8L729
Length = 199
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 30/83 (36%), Positives = 43/83 (51%)
Query: 41 RLPVKAAAEGGLSAS--ELDKLPKISGKELVMGTE--CAVCLDEVESEQPARLVPGCNHG 96
RLP G AS ++ L KI ++ +G + C VC D+ E AR +P C H
Sbjct: 84 RLPALQDRRGPPPASLAAINSLQKIKIRQKHLGLDPYCPVCQDQFEIGSDARKMP-CKHI 142
Query: 97 FHLQCADSWLSKHSVCPVCRAKL 119
+H +C WL + + CPVCR +L
Sbjct: 143 YHSECILPWLVQRNTCPVCRKEL 165
>TAIR|locus:2011491 [details] [associations]
symbol:AT1G53010 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC019018
EMBL:AC022520 IPI:IPI00532955 RefSeq:NP_175709.1 UniGene:At.66013
ProteinModelPortal:Q9C919 SMR:Q9C919 EnsemblPlants:AT1G53010.1
GeneID:841734 KEGG:ath:AT1G53010 TAIR:At1g53010 eggNOG:NOG331877
HOGENOM:HOG000152223 InParanoid:Q9C919 OMA:YHALCID PhylomeDB:Q9C919
ProtClustDB:CLSN2679774 Genevestigator:Q9C919 Uniprot:Q9C919
Length = 178
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 73 ECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
ECA+CL + R+ P C H +H C D+WL H CP CR L
Sbjct: 129 ECAICLSGYVVNEECRVFPVCRHIYHALCIDAWLKNHLTCPTCRKDL 175
>ZFIN|ZDB-GENE-041114-40 [details] [associations]
symbol:rnf24 "ring finger protein 24" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-041114-40
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000004806 HOVERGEN:HBG058899
GeneTree:ENSGT00700000104226 CTD:11237 OMA:KQVIQKE EMBL:BX004888
EMBL:BC085525 IPI:IPI00506880 RefSeq:NP_001007353.1
UniGene:Dr.88655 SMR:Q5U3J0 Ensembl:ENSDART00000053681
GeneID:492480 KEGG:dre:492480 InParanoid:Q5U3J0 NextBio:20865041
Uniprot:Q5U3J0
Length = 149
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 36/109 (33%), Positives = 54/109 (49%)
Query: 7 LALFLPCAGMSLVFIVYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELDKLPKISGK 66
L +++ G + +F+ LSLL+C +RL +A E L A + + K K
Sbjct: 22 LNIYIVVFGTA-IFVFILSLLFCCYL-------IRLRHQAHKE--LYAYK-QVIQKEKVK 70
Query: 67 ELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVC 115
EL + CAVCL+E + + + P C H FH +C WL VCP+C
Sbjct: 71 ELNLHEICAVCLEEFKQKDELGICP-CKHAFHRKCLIKWLEVRKVCPLC 118
>UNIPROTKB|F1S5Q0 [details] [associations]
symbol:LOC100519887 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
OMA:PLRTSGM EMBL:CU639394 Ensembl:ENSSSCT00000015306
ArrayExpress:F1S5Q0 Uniprot:F1S5Q0
Length = 273
Score = 130 (50.8 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 74 CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
CAVC++ + R++P C H FH C D WLS+H CP+C+ +
Sbjct: 118 CAVCIESYKQNDVVRILP-CKHVFHKSCVDPWLSEHCTCPMCKLNI 162
>UNIPROTKB|J9NV71 [details] [associations]
symbol:LOC491808 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00700000104290 OMA:SICITEY
EMBL:AAEX03026256 RefSeq:XP_855008.1 ProteinModelPortal:J9NV71
Ensembl:ENSCAFT00000045760 GeneID:491808 KEGG:cfa:491808
Uniprot:J9NV71
Length = 625
Score = 136 (52.9 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 51 GLSASELDKLPKIS-GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKH 109
GL+ +++D L S G + C++C+ E R++P C+H FH+ C D WLS++
Sbjct: 548 GLTKAQIDNLAVRSFGGSGALKA-CSICITEYTEGNRLRILP-CSHEFHVHCIDHWLSEN 605
Query: 110 SVCPVCRAKL 119
S CP+CR ++
Sbjct: 606 STCPICRGQV 615
>ZFIN|ZDB-GENE-061215-82 [details] [associations]
symbol:rnf115 "ring finger protein 115" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-061215-82 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 CTD:27246 eggNOG:NOG235630
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 OMA:STHFAEF
OrthoDB:EOG4VX262 EMBL:BX322530 EMBL:BC128879 IPI:IPI00803572
RefSeq:NP_001073542.1 UniGene:Dr.78061 SMR:A1A601
Ensembl:ENSDART00000090329 GeneID:790928 KEGG:dre:790928
InParanoid:A1A601 NextBio:20930412 Uniprot:A1A601
Length = 310
Score = 131 (51.2 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 24/60 (40%), Positives = 29/60 (48%)
Query: 73 ECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKLDSHFFNALESDNP 132
EC VC ++ +P R +P CNH FH C WL H CPVCR L+ S P
Sbjct: 237 ECPVCKEDYTVGEPVRQLP-CNHFFHSDCIVPWLELHDTCPVCRKSLNGDESGTQSSSEP 295
>FB|FBgn0038627 [details] [associations]
symbol:CG7694 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 EMBL:AE014297
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GeneTree:ENSGT00530000062967 eggNOG:NOG294567 EMBL:BT001518
RefSeq:NP_001138076.1 RefSeq:NP_650729.1 UniGene:Dm.14942
ProteinModelPortal:Q9VE61 SMR:Q9VE61 PaxDb:Q9VE61 PRIDE:Q9VE61
EnsemblMetazoa:FBtr0083632 EnsemblMetazoa:FBtr0290211 GeneID:42230
KEGG:dme:Dmel_CG7694 UCSC:CG7694-RA FlyBase:FBgn0038627
InParanoid:Q9VE61 OMA:HEFHEEC OrthoDB:EOG4DV43R PhylomeDB:Q9VE61
GenomeRNAi:42230 NextBio:827789 Uniprot:Q9VE61
Length = 147
Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 37 NG-DVRLPVKAAAEGGLSASELDKLPKIS-GKELVMGTECAVCLDEVESEQPARLVPGCN 94
NG D+ + V A++ + + ++ K G +L EC+VC + E Q R++P C
Sbjct: 35 NGIDMEIEVPEASKRAILELPVHEIVKSDEGGDL----ECSVCKEPAEEGQKYRILP-CK 89
Query: 95 HGFHLQCADSWLSKHSVCPVCRAKLDS 121
H FH +C WL K + CP+CR +L++
Sbjct: 90 HEFHEECILLWLKKTNSCPLCRYELET 116
>TAIR|locus:2082757 [details] [associations]
symbol:BRH1 "brassinosteroid-responsive RING-H2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0009741 "response to brassinosteroid stimulus" evidence=IEP]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132962 GO:GO:0046872 GO:GO:0008270
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GO:GO:0009741 HOGENOM:HOG000239353 EMBL:AF134155 EMBL:AY065300
EMBL:AY117307 EMBL:AY086562 IPI:IPI00518428 PIR:T47938
RefSeq:NP_191705.1 UniGene:At.942 ProteinModelPortal:Q9XF92
SMR:Q9XF92 STRING:Q9XF92 EnsemblPlants:AT3G61460.1 GeneID:825319
KEGG:ath:AT3G61460 TAIR:At3g61460 eggNOG:NOG310014
InParanoid:Q9XF92 OMA:PRVLLQV PhylomeDB:Q9XF92
ProtClustDB:CLSN2915750 ArrayExpress:Q9XF92 Genevestigator:Q9XF92
Uniprot:Q9XF92
Length = 170
Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 31/82 (37%), Positives = 38/82 (46%)
Query: 41 RLPVKAAAEGGLSASELDKLPKISGKELVMGTE-----CAVCLDEVESEQPARLVPGCNH 95
R+P + L E+ LP I +EL E CAVCL E E EQ R + C H
Sbjct: 58 RIPETRSPFSALLIREI--LPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRH 115
Query: 96 GFHLQCADSWLSK-HSVCPVCR 116
FH C D W+ CP+CR
Sbjct: 116 IFHRSCLDRWMDHDQKTCPLCR 137
>UNIPROTKB|G3X6F2 [details] [associations]
symbol:G3X6F2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104290 EMBL:DAAA02073789
Ensembl:ENSBTAT00000005662 OMA:SICITEY Uniprot:G3X6F2
Length = 580
Score = 135 (52.6 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 51 GLSASELDKLP-KISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKH 109
GL+ +++D L + G+ C++C+ E + R++P C+H +H C D WLS+H
Sbjct: 503 GLTKAQIDNLALRYFGENEAFKA-CSICITEYTTGNTLRILP-CSHEYHDHCIDHWLSEH 560
Query: 110 SVCPVCRAKLDSHFFNALESDN 131
+ CP+CR + + E+DN
Sbjct: 561 TTCPICRGPV----MDPSEADN 578
>UNIPROTKB|Q641J8 [details] [associations]
symbol:rnf12-a "E3 ubiquitin-protein ligase RNF12-A"
species:8355 "Xenopus laevis" [GO:0000578 "embryonic axis
specification" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0042802 "identical protein
binding" evidence=IPI] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0042787
GO:GO:0000578 EMBL:AB114039 EMBL:BC082339 RefSeq:NP_001082725.1
UniGene:Xl.11908 ProteinModelPortal:Q641J8 GeneID:398680
KEGG:xla:398680 CTD:398680 Xenbase:XB-GENE-866117
HOVERGEN:HBG009886 KO:K16271 Uniprot:Q641J8
Length = 622
Score = 135 (52.6 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 51 GLSASELDKLPKIS-GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKH 109
GL+ ++D L + G+ + T C+VC+ E R +P C+H +H+ C D WLS++
Sbjct: 545 GLTKEQIDNLSTRNFGENDALKT-CSVCITEYTEGNKLRKLP-CSHEYHIHCIDRWLSEN 602
Query: 110 SVCPVCR 116
S CP+CR
Sbjct: 603 STCPICR 609
>TAIR|locus:2086380 [details] [associations]
symbol:AT3G14970 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AP000370 IPI:IPI00548062
RefSeq:NP_188115.1 UniGene:At.65090 ProteinModelPortal:Q9LKA8
SMR:Q9LKA8 EnsemblPlants:AT3G14970.1 GeneID:820726
KEGG:ath:AT3G14970 TAIR:At3g14970 eggNOG:NOG246587
HOGENOM:HOG000153041 InParanoid:Q9LKA8 OMA:INVIVWR PhylomeDB:Q9LKA8
ProtClustDB:CLSN2685086 Genevestigator:Q9LKA8 Uniprot:Q9LKA8
Length = 220
Score = 126 (49.4 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 31/101 (30%), Positives = 53/101 (52%)
Query: 19 VFIVYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELDKLPKISGKELVMGTECAVCL 78
V +V ++W +D+D++ DVRL V A+ + L+ + + E + C +C+
Sbjct: 124 VDVVINVIVWRFPDDDDDDVDVRLAVAPASNEAVE-QHLETV--VVENE----SWCVICM 176
Query: 79 DEVES--EQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRA 117
D++ + A +P C+H FH C + WL +CPVCRA
Sbjct: 177 DKIRIGLDVAAGRMP-CSHVFHRTCGEDWLRCSGICPVCRA 216
>UNIPROTKB|F1NRC6 [details] [associations]
symbol:RLIM "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0060816 "random
inactivation of X chromosome" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433
GO:GO:0004842 GeneTree:ENSGT00700000104290 OMA:RNFGESD
GO:GO:0060816 EMBL:AADN02013542 IPI:IPI00573322
Ensembl:ENSGALT00000012569 Uniprot:F1NRC6
Length = 593
Score = 134 (52.2 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 51 GLSASELDKLPKIS-GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKH 109
GL+ ++D L + G+ + T C+VC+ E R +P C+H +H+ C D WLS++
Sbjct: 516 GLTKEQIDNLAMRNFGESDALKT-CSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSEN 573
Query: 110 SVCPVCR 116
S CP+CR
Sbjct: 574 STCPICR 580
>UNIPROTKB|F1PQP8 [details] [associations]
symbol:RNF130 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0012501 "programmed cell death" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0012501 GeneTree:ENSGT00700000104211
OMA:PLRTSGM EMBL:AAEX03007678 Ensembl:ENSCAFT00000038586
Uniprot:F1PQP8
Length = 344
Score = 130 (50.8 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 74 CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
CAVC++ + R++P C H FH C D WLS+H CP+C+ +
Sbjct: 193 CAVCIESYKQNDVVRILP-CKHVFHKSCVDPWLSEHCTCPMCKLNI 237
>UNIPROTKB|Q7T037 [details] [associations]
symbol:rnf12-b "E3 ubiquitin-protein ligase RNF12-B"
species:8355 "Xenopus laevis" [GO:0000578 "embryonic axis
specification" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0042802 "identical protein
binding" evidence=ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0042802
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
GO:GO:0008134 GO:GO:0042787 GO:GO:0000578 HOVERGEN:HBG009886
EMBL:AB114040 RefSeq:NP_001108244.1 UniGene:Xl.81512
ProteinModelPortal:Q7T037 GeneID:100137618 KEGG:xla:100137618
CTD:100137618 Xenbase:XB-GENE-6256130 Uniprot:Q7T037
Length = 757
Score = 135 (52.6 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 51 GLSASELDKLPKIS-GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKH 109
GL+ ++D L + G+ + T C+VC+ E R +P C+H +H+ C D WLS++
Sbjct: 680 GLTKEQIDNLSTRNYGENDALKT-CSVCITEYTEGNKLRKLP-CSHEYHIHCIDRWLSEN 737
Query: 110 SVCPVCR 116
S CP+CR
Sbjct: 738 STCPICR 744
>ZFIN|ZDB-GENE-081104-369 [details] [associations]
symbol:rnf165b "ring finger protein 165b"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-081104-369 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00670000097625
EMBL:CABZ01049924 EMBL:CT573450 IPI:IPI00890535 RefSeq:XP_701217.3
UniGene:Dr.65572 Ensembl:ENSDART00000109989 GeneID:572413
KEGG:dre:572413 CTD:572413 NextBio:20890947 Uniprot:F1R351
Length = 347
Score = 130 (50.8 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 66 KELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKLDS 121
+EL +C +CL +E E+ R +P C H FH C D WL+ + CP+CR +++
Sbjct: 287 EELDTDEKCTICLSMLEDEEDVRRLP-CMHLFHQACVDQWLATNKKCPICRVDIET 341
>UNIPROTKB|Q07G42 [details] [associations]
symbol:rnf12 "E3 ubiquitin-protein ligase RNF12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000578 "embryonic
axis specification" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0042802 "identical protein
binding" evidence=ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0042802
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 GO:GO:0004842
GO:GO:0008134 GO:GO:0042787 GO:GO:0000578 HOVERGEN:HBG009886
KO:K16271 CTD:51132 HOGENOM:HOG000273881 EMBL:CR762181
RefSeq:NP_001016091.1 UniGene:Str.64802 ProteinModelPortal:Q07G42
STRING:Q07G42 GeneID:548845 KEGG:xtr:548845 Xenbase:XB-GENE-492020
Uniprot:Q07G42
Length = 639
Score = 134 (52.2 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 51 GLSASELDKLPKIS-GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKH 109
GL+ ++D L + G+ + T C+VC+ E R +P C+H +H+ C D WLS++
Sbjct: 562 GLTKEQIDNLSTRNFGENDALKT-CSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSEN 619
Query: 110 SVCPVCR 116
S CP+CR
Sbjct: 620 STCPICR 626
>TAIR|locus:2030933 [details] [associations]
symbol:AT1G17970 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AF428290
EMBL:AY116963 IPI:IPI00539075 RefSeq:NP_173239.1 UniGene:At.26262
ProteinModelPortal:Q944L9 SMR:Q944L9 IntAct:Q944L9
EnsemblPlants:AT1G17970.1 GeneID:838377 KEGG:ath:AT1G17970
TAIR:At1g17970 InParanoid:Q944L9 OMA:ESEIHRC PhylomeDB:Q944L9
ProtClustDB:CLSN2679891 Genevestigator:Q944L9 Uniprot:Q944L9
Length = 368
Score = 130 (50.8 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 51 GLSASELDK-LPKI--SGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLS 107
GL SE+ + L KI S ++ +C++C DE E E + C H FH+ C WLS
Sbjct: 294 GLKESEIHRCLGKIKPSVSHTLVDRKCSICQDEYEREDEVGEL-NCGHSFHVHCVKQWLS 352
Query: 108 KHSVCPVCR 116
+ + CPVC+
Sbjct: 353 RKNACPVCK 361
>ZFIN|ZDB-GENE-060503-608 [details] [associations]
symbol:si:ch211-81a5.1 "si:ch211-81a5.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-060503-608 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00530000062967
EMBL:CR626935 EMBL:CU464180 IPI:IPI00509117 RefSeq:XP_003200594.1
Ensembl:ENSDART00000091443 GeneID:563879 KEGG:dre:563879
NextBio:20885118 Bgee:F1QQA9 Uniprot:F1QQA9
Length = 301
Score = 128 (50.1 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 26/66 (39%), Positives = 32/66 (48%)
Query: 57 LDKLP--KISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPV 114
+ LP IS ++ EC VC +E + R +P C H FH C WL H CPV
Sbjct: 206 ISSLPTVSISSEQAACRLECPVCREEFSVGESVRQLP-CLHYFHSSCIVPWLQLHDTCPV 264
Query: 115 CRAKLD 120
CR LD
Sbjct: 265 CRKSLD 270
>UNIPROTKB|J3KN31 [details] [associations]
symbol:RNF130 "E3 ubiquitin-protein ligase RNF130"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:CH471165
UniGene:Hs.484363 HGNC:HGNC:18280 ChiTaRS:RNF130 EMBL:AC010285
EMBL:AC026413 EMBL:AC122713 ProteinModelPortal:J3KN31
Ensembl:ENST00000261947 Uniprot:J3KN31
Length = 384
Score = 130 (50.8 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 74 CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
CAVC++ + R++P C H FH C D WLS+H CP+C+ +
Sbjct: 264 CAVCIESYKQNDVVRILP-CKHVFHKSCVDPWLSEHCTCPMCKLNI 308
>UNIPROTKB|Q9UKV5 [details] [associations]
symbol:AMFR "E3 ubiquitin-protein ligase AMFR" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IMP;IDA] [GO:0030176
"integral to endoplasmic reticulum membrane" evidence=IDA]
[GO:0004872 "receptor activity" evidence=IPI] [GO:0016021 "integral
to membrane" evidence=NAS] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP;IDA] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0051259 "protein
oligomerization" evidence=IDA] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0006928 "cellular component movement" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR001841
InterPro:IPR003892 InterPro:IPR026608 Pfam:PF02845 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS51140 SMART:SM00184 SMART:SM00546
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0051259 GO:GO:0005634
GO:GO:0046872 GO:GO:0007568 GO:GO:0043025 GO:GO:0030425
GO:GO:0008270 GO:GO:0004872 GO:GO:0006928 GO:GO:0030426
GO:GO:0007611 GO:GO:0030176 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030433 GO:GO:0004842 EMBL:AF124145 EMBL:BC069197 EMBL:L35233
EMBL:M63175 IPI:IPI00423874 IPI:IPI00435690 PIR:A39877
RefSeq:NP_001135.3 UniGene:Hs.295137 UniGene:Hs.593157 PDB:2EJS
PDB:2LVN PDB:2LVO PDB:2LVP PDB:2LVQ PDB:3FSH PDB:3H8K PDB:3TIW
PDB:4G3O PDBsum:2EJS PDBsum:2LVN PDBsum:2LVO PDBsum:2LVP
PDBsum:2LVQ PDBsum:3FSH PDBsum:3H8K PDBsum:3TIW PDBsum:4G3O
ProteinModelPortal:Q9UKV5 SMR:Q9UKV5 DIP:DIP-29060N IntAct:Q9UKV5
STRING:Q9UKV5 PhosphoSite:Q9UKV5 DMDM:113707 DMDM:34922250
PeptideAtlas:Q9UKV5 PRIDE:Q9UKV5 Ensembl:ENST00000290649 GeneID:267
KEGG:hsa:267 UCSC:uc002eiy.3 CTD:267 GeneCards:GC16M056395
HGNC:HGNC:463 HPA:CAB026381 MIM:603243 neXtProt:NX_Q9UKV5
PharmGKB:PA24768 eggNOG:COG5243 HOGENOM:HOG000037436
HOVERGEN:HBG044694 InParanoid:Q9UKV5 KO:K10636 OMA:YTDFIME
OrthoDB:EOG4DJJW8 PhylomeDB:Q9UKV5 ChiTaRS:AMFR
EvolutionaryTrace:Q9UKV5 GenomeRNAi:267 NextBio:1049
ArrayExpress:Q9UKV5 Bgee:Q9UKV5 CleanEx:HS_AMFR
Genevestigator:Q9UKV5 GermOnline:ENSG00000159461 GO:GO:0030968
GO:GO:0000209 PANTHER:PTHR12477:SF4 Uniprot:Q9UKV5
Length = 643
Score = 114 (45.2 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 24/56 (42%), Positives = 32/56 (57%)
Query: 66 KELVMGTE-CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKLD 120
+EL + + CA+C D S Q AR +P C H FH C SWL + + CP CR L+
Sbjct: 332 EELAVNNDDCAICWD---SMQAARKLP-CGHLFHNSCLRSWLEQDTSCPTCRMSLN 383
Score = 42 (19.8 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 6/18 (33%), Positives = 14/18 (77%)
Query: 2 IVSVILALFLPCAGMSLV 19
++S+++A+ L C G++ V
Sbjct: 186 VLSLLVAMLLSCCGLAAV 203
>WB|WBGene00021842 [details] [associations]
symbol:Y54E10BR.3 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005680
"anaphase-promoting complex" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 eggNOG:NOG235630 KO:K11982
EMBL:FO081636 RefSeq:NP_491091.1 ProteinModelPortal:Q9N3D1
SMR:Q9N3D1 STRING:Q9N3D1 PaxDb:Q9N3D1 EnsemblMetazoa:Y54E10BR.3
GeneID:171875 KEGG:cel:CELE_Y54E10BR.3 UCSC:Y54E10BR.3 CTD:171875
WormBase:Y54E10BR.3 HOGENOM:HOG000017337 InParanoid:Q9N3D1
OMA:FHRPCIE NextBio:873059 Uniprot:Q9N3D1
Length = 304
Score = 128 (50.1 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 24/75 (32%), Positives = 42/75 (56%)
Query: 49 EGGLSASELDK-LP--KISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSW 105
+GG + +E+ + LP K++ + + G +C C D + ++ + CNH FH C + W
Sbjct: 210 QGGFTEAEVKEYLPMKKVTQEHIDNGAQCTTCFDTFKLDEDVGALD-CNHIFHRPCIEPW 268
Query: 106 LSKHSVCPVCRAKLD 120
L + CPVCR K++
Sbjct: 269 LKTKNSCPVCRQKVN 283
>TAIR|locus:2040736 [details] [associations]
symbol:AT2G37580 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0016757 "transferase activity, transferring
glycosyl groups" evidence=ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 EMBL:AC004684
Prosite:PS00518 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BT024849 EMBL:AY084758
IPI:IPI00534718 PIR:T02524 RefSeq:NP_565865.1 UniGene:At.37407
ProteinModelPortal:O80927 SMR:O80927 EnsemblPlants:AT2G37580.1
GeneID:818334 KEGG:ath:AT2G37580 TAIR:At2g37580 eggNOG:NOG296823
HOGENOM:HOG000029123 InParanoid:O80927 OMA:KEIGNEC PhylomeDB:O80927
ProtClustDB:CLSN2917258 Genevestigator:O80927 GermOnline:AT2G37580
Uniprot:O80927
Length = 235
Score = 125 (49.1 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 26/87 (29%), Positives = 41/87 (47%)
Query: 31 SNDNDNNGDVRLPVKAAAEGGLSASELDKLPKIS-GKELVMGTECAVCLDEVESEQPARL 89
S+ +D+ + E +++ K K + KE+ G EC+VCL R
Sbjct: 100 SSSSDDTPHATVDTPPITETTVTSESGGKFHKDTHSKEI--GNECSVCLMVFTDSDELRQ 157
Query: 90 VPGCNHGFHLQCADSWLSKHSVCPVCR 116
+ C H FH+ C ++WL H CP+CR
Sbjct: 158 LSECKHAFHVLCIETWLKDHPNCPICR 184
>MGI|MGI:1921382 [details] [associations]
symbol:Rnf6 "ring finger protein (C3H2C3 type) 6"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0016605 "PML body" evidence=IDA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030424 "axon" evidence=IDA]
[GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] [GO:0042995 "cell projection" evidence=IEA]
[GO:0044314 "protein K27-linked ubiquitination" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=ISO] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISO]
[GO:0070936 "protein K48-linked ubiquitination" evidence=IMP]
[GO:0085020 "protein K6-linked ubiquitination" evidence=ISO]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:1921382 Prosite:PS00518 GO:GO:0005737
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0016605
GO:GO:0030424 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 HSSP:Q9LRB7 eggNOG:COG5540 GO:GO:0004842
GO:GO:0050681 GO:GO:0060765 GO:GO:0070936 GO:GO:0085020
GO:GO:0030517 GO:GO:0044314 EMBL:CH466614 HOVERGEN:HBG009886
GeneTree:ENSGT00700000104290 HOGENOM:HOG000273881 CTD:6049
OMA:TIRIPLR OrthoDB:EOG4N04DD EMBL:AY039004 EMBL:AK004745
EMBL:AK150269 EMBL:AK152106 EMBL:BC138545 IPI:IPI00471389
RefSeq:NP_001243014.1 RefSeq:NP_001243016.1 RefSeq:NP_083050.1
UniGene:Mm.26696 ProteinModelPortal:Q9DBU5 SMR:Q9DBU5 IntAct:Q9DBU5
STRING:Q9DBU5 PhosphoSite:Q9DBU5 PRIDE:Q9DBU5
Ensembl:ENSMUST00000067837 Ensembl:ENSMUST00000161859
Ensembl:ENSMUST00000169407 GeneID:74132 KEGG:mmu:74132
UCSC:uc009anb.1 InParanoid:B2RRR0 NextBio:339862 Bgee:Q9DBU5
Genevestigator:Q9DBU5 Uniprot:Q9DBU5
Length = 667
Score = 133 (51.9 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 51 GLSASELDKLPKIS----GKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWL 106
GL+ ++D L S G + +G C+VC+ + + R +P C H FH+ C D WL
Sbjct: 587 GLTKEQIDNLSTRSYEQDGVDSELGKVCSVCISDYVAGNKLRQLP-CLHEFHIHCIDRWL 645
Query: 107 SKHSVCPVCR 116
S++ CPVCR
Sbjct: 646 SENCTCPVCR 655
>UNIPROTKB|A5D7H4 [details] [associations]
symbol:RNF6 "RNF6 protein" species:9913 "Bos taurus"
[GO:0085020 "protein K6-linked ubiquitination" evidence=IEA]
[GO:0070936 "protein K48-linked ubiquitination" evidence=IEA]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0044314 "protein K27-linked ubiquitination"
evidence=IEA] [GO:0030517 "negative regulation of axon extension"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0016605 "PML
body" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0016605 GO:GO:0030424
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
eggNOG:COG5540 GO:GO:0004842 GO:GO:0060765 GO:GO:0070936
GO:GO:0085020 GO:GO:0030517 GO:GO:0044314 HOVERGEN:HBG009886
GeneTree:ENSGT00700000104290 HOGENOM:HOG000273881 CTD:6049
OMA:TIRIPLR OrthoDB:EOG4N04DD EMBL:DAAA02033174 EMBL:BC140555
IPI:IPI00905825 RefSeq:NP_001091531.1 UniGene:Bt.13984
Ensembl:ENSBTAT00000047301 GeneID:527056 KEGG:bta:527056
InParanoid:A5D7H4 NextBio:20874504 Uniprot:A5D7H4
Length = 669
Score = 133 (51.9 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 30/85 (35%), Positives = 44/85 (51%)
Query: 36 NNGDVRLPVKAAAEGGLSASELDKLP----KISGKELVMGTECAVCLDEVESEQPARLVP 91
N GD P + GL+ ++D L + SG + G C+VC+ + + R +P
Sbjct: 579 NEGDDDDPTR-----GLTKEQIDNLSTRNYEHSGADGEPGKACSVCISDYVAGNKLRQLP 633
Query: 92 GCNHGFHLQCADSWLSKHSVCPVCR 116
C H FH+ C D WLS++ CPVCR
Sbjct: 634 -CMHEFHIHCIDRWLSENCTCPVCR 657
>UNIPROTKB|Q3T0W3 [details] [associations]
symbol:RNF181 "E3 ubiquitin-protein ligase RNF181"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 EMBL:BC102230 IPI:IPI00699256
RefSeq:NP_001029682.1 UniGene:Bt.44205 ProteinModelPortal:Q3T0W3
Ensembl:ENSBTAT00000024336 GeneID:515743 KEGG:bta:515743 CTD:51255
eggNOG:NOG294567 HOGENOM:HOG000031081 HOVERGEN:HBG108412
InParanoid:Q3T0W3 OMA:EEQYRQN OrthoDB:EOG40VVQW NextBio:20871984
Uniprot:Q3T0W3
Length = 153
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 57 LDKLPK--ISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPV 114
++ LP+ I G + + +C VCL E E E+ A +P C+H FH C WLSK + CP+
Sbjct: 59 VENLPRTVIRGSQAEL--KCPVCLLEFEEEETAIEMP-CHHLFHSNCILPWLSKTNSCPL 115
Query: 115 CRAKL 119
CR +L
Sbjct: 116 CRHEL 120
>UNIPROTKB|C9J1C6 [details] [associations]
symbol:RNF181 "E3 ubiquitin-protein ligase RNF181"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC016753 HOGENOM:HOG000031081
OrthoDB:EOG40VVQW HGNC:HGNC:28037 IPI:IPI00926363
ProteinModelPortal:C9J1C6 SMR:C9J1C6 STRING:C9J1C6
Ensembl:ENST00000441634 ArrayExpress:C9J1C6 Bgee:C9J1C6
Uniprot:C9J1C6
Length = 139
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 57 LDKLPK--ISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPV 114
++ LP+ I G + + +C VCL E E E+ A +P C+H FH C WLSK + CP+
Sbjct: 59 VENLPRTVIRGSQAEL--KCPVCLLEFEEEETAIEMP-CHHLFHSSCILPWLSKTNSCPL 115
Query: 115 CRAKL 119
CR +L
Sbjct: 116 CRYEL 120
>UNIPROTKB|Q9P0P0 [details] [associations]
symbol:RNF181 "E3 ubiquitin-protein ligase RNF181"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 EMBL:AC016753 CTD:51255 eggNOG:NOG294567
HOGENOM:HOG000031081 HOVERGEN:HBG108412 OMA:EEQYRQN EMBL:AF151072
EMBL:CR457165 EMBL:AK222700 EMBL:BC002803 IPI:IPI00292354
RefSeq:NP_057578.1 UniGene:Hs.356187 ProteinModelPortal:Q9P0P0
SMR:Q9P0P0 IntAct:Q9P0P0 STRING:Q9P0P0 PhosphoSite:Q9P0P0
DMDM:74761852 PaxDb:Q9P0P0 PRIDE:Q9P0P0 DNASU:51255
Ensembl:ENST00000306368 GeneID:51255 KEGG:hsa:51255 UCSC:uc002spv.1
GeneCards:GC02P085822 HGNC:HGNC:28037 HPA:HPA046112 MIM:612490
neXtProt:NX_Q9P0P0 PharmGKB:PA162401586 InParanoid:Q9P0P0
PhylomeDB:Q9P0P0 GenomeRNAi:51255 NextBio:54406 ArrayExpress:Q9P0P0
Bgee:Q9P0P0 CleanEx:HS_RNF181 Genevestigator:Q9P0P0 Uniprot:Q9P0P0
Length = 153
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 57 LDKLPK--ISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPV 114
++ LP+ I G + + +C VCL E E E+ A +P C+H FH C WLSK + CP+
Sbjct: 59 VENLPRTVIRGSQAEL--KCPVCLLEFEEEETAIEMP-CHHLFHSSCILPWLSKTNSCPL 115
Query: 115 CRAKL 119
CR +L
Sbjct: 116 CRYEL 120
>ZFIN|ZDB-GENE-040426-1277 [details] [associations]
symbol:rnf11a "ring finger protein 11a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-040426-1277 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 HOVERGEN:HBG058444
EMBL:BC053118 IPI:IPI00485593 RefSeq:NP_957315.1 UniGene:Dr.85919
ProteinModelPortal:Q7T3H3 GeneID:393996 KEGG:dre:393996 CTD:393996
InParanoid:Q7T3H3 NextBio:20814964 ArrayExpress:Q7T3H3
Uniprot:Q7T3H3
Length = 146
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 73 ECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKLDSHFFNALESD 130
EC +C+ + E P R +P C H +H+ C D+WL + CP C +D+ ++ E++
Sbjct: 90 ECVICMMDFEYGDPIRFLP-CMHIYHVDCIDAWLMRSFTCPSCMEPVDAALLSSYETN 146
>UNIPROTKB|F1MIY9 [details] [associations]
symbol:RNF130 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0012501 "programmed cell death" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0012501 GeneTree:ENSGT00700000104211
OMA:PLRTSGM EMBL:DAAA02018962 EMBL:DAAA02018963 EMBL:DAAA02018964
EMBL:DAAA02018965 IPI:IPI00687594 Ensembl:ENSBTAT00000006384
ArrayExpress:F1MIY9 Uniprot:F1MIY9
Length = 418
Score = 130 (50.8 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 74 CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
CAVC++ + R++P C H FH C D WLS+H CP+C+ +
Sbjct: 263 CAVCIESYKQNDVVRILP-CKHVFHKSCVDPWLSEHCTCPMCKLNI 307
>UNIPROTKB|E5RI87 [details] [associations]
symbol:RNF130 "E3 ubiquitin-protein ligase RNF130"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HGNC:HGNC:18280 ChiTaRS:RNF130
EMBL:AC010285 EMBL:AC026413 EMBL:AC122713 IPI:IPI00982148
ProteinModelPortal:E5RI87 SMR:E5RI87 Ensembl:ENST00000522208
OMA:MELPDIQ ArrayExpress:E5RI87 Bgee:E5RI87 Uniprot:E5RI87
Length = 419
Score = 130 (50.8 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 74 CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
CAVC++ + R++P C H FH C D WLS+H CP+C+ +
Sbjct: 264 CAVCIESYKQNDVVRILP-CKHVFHKSCVDPWLSEHCTCPMCKLNI 308
>UNIPROTKB|Q86XS8 [details] [associations]
symbol:RNF130 "E3 ubiquitin-protein ligase RNF130"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0012501
"programmed cell death" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR003137 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0005634 GO:GO:0005737 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 eggNOG:NOG302028 GO:GO:0012501 EMBL:AY083998
EMBL:BC017100 EMBL:BC065244 EMBL:BC082267 EMBL:BC108306
EMBL:AF155650 IPI:IPI00183643 RefSeq:NP_060904.2 UniGene:Hs.484363
ProteinModelPortal:Q86XS8 SMR:Q86XS8 IntAct:Q86XS8
MINT:MINT-1388856 STRING:Q86XS8 PhosphoSite:Q86XS8 DMDM:56749089
PRIDE:Q86XS8 Ensembl:ENST00000520911 Ensembl:ENST00000521389
GeneID:55819 KEGG:hsa:55819 UCSC:uc003mll.1 CTD:55819
GeneCards:GC05M179345 HGNC:HGNC:18280 HPA:HPA014499
neXtProt:NX_Q86XS8 PharmGKB:PA134871556 HOGENOM:HOG000231432
HOVERGEN:HBG057659 InParanoid:Q86XS8 KO:K15701 OrthoDB:EOG40VVQ5
PhylomeDB:Q86XS8 ChiTaRS:RNF130 GenomeRNAi:55819 NextBio:61006
ArrayExpress:Q86XS8 Bgee:Q86XS8 CleanEx:HS_RNF130
Genevestigator:Q86XS8 GermOnline:ENSG00000113269 Uniprot:Q86XS8
Length = 419
Score = 130 (50.8 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 74 CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
CAVC++ + R++P C H FH C D WLS+H CP+C+ +
Sbjct: 264 CAVCIESYKQNDVVRILP-CKHVFHKSCVDPWLSEHCTCPMCKLNI 308
>UNIPROTKB|D6RIE5 [details] [associations]
symbol:RNF150 "RING finger protein 150" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000231432 EMBL:AC093905 EMBL:AC096733 EMBL:AC097475
HGNC:HGNC:23138 EMBL:AC107220 IPI:IPI00964624
ProteinModelPortal:D6RIE5 SMR:D6RIE5 Ensembl:ENST00000506101
ArrayExpress:D6RIE5 Bgee:D6RIE5 Uniprot:D6RIE5
Length = 230
Score = 124 (48.7 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 35/120 (29%), Positives = 60/120 (50%)
Query: 2 IVSVILALFLPCAGMSLVFIVYLSLL-WCASNDNDNNGDVRLPVKAAAEGGLSASELDKL 60
+V V ++ F+ +SL ++V+ + + +N D N RL AA+ +S ++ +
Sbjct: 40 VVFVSIS-FIVLMIISLAWLVFYYIQRFRYANARDRN-QRRLG--DAAKKAISKLQIRTI 95
Query: 61 PKISGKELVMGTE-CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
K KE + CAVC++ + R++P C H FH C D WL H CP+C+ +
Sbjct: 96 KK-GDKETESDFDNCAVCIEGYKPNDVVRILP-CRHLFHKSCVDPWLLDHRTCPMCKMNI 153
>UNIPROTKB|Q5Z5F2 [details] [associations]
symbol:LOC_Os06g34450 "E3 ubiquitin-protein ligase
Os06g0535400" species:39947 "Oryza sativa Japonica Group"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0046872
EMBL:AP008212 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AP005723 EMBL:AK066960 RefSeq:NP_001057791.1
UniGene:Os.5874 ProteinModelPortal:Q5Z5F2
EnsemblPlants:LOC_Os06g34450.1 GeneID:4341214
KEGG:dosa:Os06t0535400-01 KEGG:osa:4341214 Gramene:Q5Z5F2
eggNOG:NOG282486 OMA:CLAGMRE ProtClustDB:CLSN2696222 Uniprot:Q5Z5F2
Length = 251
Score = 125 (49.1 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 73 ECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCR 116
+C VCL + Q R +P C H FH +C WL+ H CPVCR
Sbjct: 184 KCCVCLAGMREAQALRDLPRCGHRFHAKCIGKWLTAHPTCPVCR 227
>UNIPROTKB|F8WCD0 [details] [associations]
symbol:RNF149 "E3 ubiquitin-protein ligase RNF149"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC013722
EMBL:AC073643 HGNC:HGNC:23137 IPI:IPI00917006
ProteinModelPortal:F8WCD0 SMR:F8WCD0 Ensembl:ENST00000424632
ArrayExpress:F8WCD0 Bgee:F8WCD0 Uniprot:F8WCD0
Length = 398
Score = 115 (45.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 74 CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKLD 120
CAVC++ + + R++P C H FH C D WL H CP+C KLD
Sbjct: 269 CAVCIENFKVKDIIRILP-CKHIFHRICIDPWLLDHRTCPMC--KLD 312
Score = 34 (17.0 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 33 DNDNNGDVRLPVKAAAEGGLSASELDKLPKISGKELV 69
+ + G++ LP+ A G + + PK G+E++
Sbjct: 139 NEERYGNITLPMSHAGTGNIVVIMIS-YPK--GREIL 172
>UNIPROTKB|Q8NC42 [details] [associations]
symbol:RNF149 "E3 ubiquitin-protein ligase RNF149"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 Pfam:PF02225 Prosite:PS00518 GO:GO:0016021
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 eggNOG:NOG302028
EMBL:AC013722 HOGENOM:HOG000231432 HOVERGEN:HBG057659 EMBL:AY450390
EMBL:AK074985 EMBL:AK075141 EMBL:AM392566 EMBL:AC073643
EMBL:BC019355 EMBL:BC032328 EMBL:BC045743 IPI:IPI00175092
RefSeq:NP_775918.2 UniGene:Hs.142074 ProteinModelPortal:Q8NC42
SMR:Q8NC42 IntAct:Q8NC42 PhosphoSite:Q8NC42 DMDM:160332298
PaxDb:Q8NC42 PRIDE:Q8NC42 DNASU:284996 Ensembl:ENST00000295317
GeneID:284996 KEGG:hsa:284996 UCSC:uc002taz.2 CTD:284996
GeneCards:GC02M101887 H-InvDB:HIX0023941 HGNC:HGNC:23137
HPA:HPA011424 neXtProt:NX_Q8NC42 PharmGKB:PA134895641
InParanoid:Q8NC42 KO:K15704 OMA:GCAPDTR GenomeRNAi:284996
NextBio:95209 ArrayExpress:Q8NC42 Bgee:Q8NC42 CleanEx:HS_RNF149
Genevestigator:Q8NC42 GermOnline:ENSG00000163162 Uniprot:Q8NC42
Length = 400
Score = 115 (45.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 74 CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKLD 120
CAVC++ + + R++P C H FH C D WL H CP+C KLD
Sbjct: 269 CAVCIENFKVKDIIRILP-CKHIFHRICIDPWLLDHRTCPMC--KLD 312
Score = 34 (17.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 33 DNDNNGDVRLPVKAAAEGGLSASELDKLPKISGKELV 69
+ + G++ LP+ A G + + PK G+E++
Sbjct: 139 NEERYGNITLPMSHAGTGNIVVIMIS-YPK--GREIL 172
>UNIPROTKB|G3MWN3 [details] [associations]
symbol:G3MWN3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104290 EMBL:DAAA02001065
Ensembl:ENSBTAT00000064904 Uniprot:G3MWN3
Length = 136
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 72 TECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKLDS 121
TECAVCL ++ R +P C H +HL C + WL++ CP+CR D+
Sbjct: 80 TECAVCLMDLVPGDLIRPLP-CKHVYHLDCINQWLTRSFTCPLCRGPADA 128
>TAIR|locus:1006230720 [details] [associations]
symbol:AT1G24580 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K16285
ProtClustDB:CLSN2681281 EMBL:BT014952 EMBL:BT020604 IPI:IPI00542297
RefSeq:NP_973908.1 UniGene:At.49461 ProteinModelPortal:Q6GKW2
SMR:Q6GKW2 EnsemblPlants:AT1G24580.1 GeneID:2745762
KEGG:ath:AT1G24580 eggNOG:NOG279711 OMA:FQIVASE
Genevestigator:Q6GKW2 Uniprot:Q6GKW2
Length = 113
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 52 LSASELDKL-PKISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWL-SKH 109
+S ++ L I +E G EC VCL + E+ + C H FH C D+W + H
Sbjct: 44 ISITQFKSLCENIEEEEEEKGVECCVCLCGFKEEEEVSELVSCKHFFHRACLDNWFGNNH 103
Query: 110 SVCPVCRAKL 119
+ CP+CR+ L
Sbjct: 104 TTCPLCRSIL 113
>TAIR|locus:2128303 [details] [associations]
symbol:RHA1A "RING-H2 finger A1A" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009693 "ethylene biosynthetic process"
evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL096882 EMBL:AL161531 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AF078683
EMBL:AY086119 IPI:IPI00533363 PIR:T13028 PIR:T51840
RefSeq:NP_192876.1 UniGene:At.24904 ProteinModelPortal:Q9SUS4
SMR:Q9SUS4 STRING:Q9SUS4 PRIDE:Q9SUS4 EnsemblPlants:AT4G11370.1
GeneID:826739 KEGG:ath:AT4G11370 GeneFarm:4090 TAIR:At4g11370
eggNOG:NOG278665 HOGENOM:HOG000239353 InParanoid:Q9SUS4 KO:K16281
OMA:FFRDIVD PhylomeDB:Q9SUS4 ProtClustDB:CLSN2685308
Genevestigator:Q9SUS4 Uniprot:Q9SUS4
Length = 159
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 54 ASELDKLPKISGKELVMGTE--CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSV 111
A+EL +P + +L E C VCL + ES+ R +P C H FH C D W+ ++
Sbjct: 66 ANEL--IPVVRFSDLPTDPEDCCTVCLSDFESDDKVRQLPKCGHVFHHYCLDRWIVDYNK 123
Query: 112 --CPVCR 116
CPVCR
Sbjct: 124 MKCPVCR 130
>UNIPROTKB|E1C2S8 [details] [associations]
symbol:RNF6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0030517 "negative regulation of axon
extension" evidence=IEA] [GO:0044314 "protein K27-linked
ubiquitination" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0070936 "protein
K48-linked ubiquitination" evidence=IEA] [GO:0085020 "protein
K6-linked ubiquitination" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005737
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0016605
GO:GO:0030424 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004842 GO:GO:0060765 GO:GO:0070936
GO:GO:0085020 GO:GO:0044314 GeneTree:ENSGT00700000104290
OMA:TIRIPLR EMBL:AADN02005166 IPI:IPI00592288
Ensembl:ENSGALT00000027631 Uniprot:E1C2S8
Length = 673
Score = 132 (51.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 27/71 (38%), Positives = 41/71 (57%)
Query: 51 GLSASELDKLPK-----ISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSW 105
GL+ ++D L I +E + T C+VC++E + R +P C H FH+ C D W
Sbjct: 593 GLTKEQIDNLSTRNYGDIHTEEEISKT-CSVCINEYVTGNKLRQLP-CMHEFHIHCIDRW 650
Query: 106 LSKHSVCPVCR 116
LS++S CP+CR
Sbjct: 651 LSENSTCPICR 661
>MGI|MGI:1891717 [details] [associations]
symbol:Rnf130 "ring finger protein 130" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0012501 "programmed cell death" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=NAS] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 MGI:MGI:1891717 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0005634 GO:GO:0005737 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 eggNOG:NOG302028 GO:GO:0012501 EMBL:AL627187
GeneTree:ENSGT00700000104211 CTD:55819 HOGENOM:HOG000231432
HOVERGEN:HBG057659 KO:K15701 OrthoDB:EOG40VVQ5 EMBL:AF171875
EMBL:AL645913 EMBL:BC018199 EMBL:BC048901 IPI:IPI00331206
RefSeq:NP_067515.2 UniGene:Mm.359004 ProteinModelPortal:Q8VEM1
SMR:Q8VEM1 STRING:Q8VEM1 PhosphoSite:Q8VEM1 PRIDE:Q8VEM1
Ensembl:ENSMUST00000102776 GeneID:59044 KEGG:mmu:59044
UCSC:uc007irl.1 InParanoid:Q8VEM1 OMA:PLRTSGM NextBio:314662
Bgee:Q8VEM1 CleanEx:MM_RNF130 Genevestigator:Q8VEM1
GermOnline:ENSMUSG00000020376 Uniprot:Q8VEM1
Length = 419
Score = 129 (50.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 74 CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
CAVC++ + R++P C H FH C D WLS+H CP+C+ +
Sbjct: 264 CAVCIESYKQNDVVRVLP-CKHVFHKSCVDPWLSEHCTCPMCKLNI 308
>RGD|1562041 [details] [associations]
symbol:LOC652955 "goliath" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0012501 "programmed cell death" evidence=ISS] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 RGD:1562041 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0005737 GO:GO:0006915 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0012501 HOVERGEN:HBG057659 KO:K15701 EMBL:AY190520
IPI:IPI00454369 RefSeq:NP_001032747.1 UniGene:Rn.186211
ProteinModelPortal:Q6Y290 GeneID:652955 KEGG:rno:652955
NextBio:714879 Genevestigator:Q6Y290 Uniprot:Q6Y290
Length = 419
Score = 129 (50.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 74 CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
CAVC++ + R++P C H FH C D WLS+H CP+C+ +
Sbjct: 264 CAVCIESYKQNDVVRVLP-CKHVFHKSCVDPWLSEHCTCPMCKLNI 308
>UNIPROTKB|I3LHE1 [details] [associations]
symbol:RNF6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0085020 "protein K6-linked ubiquitination"
evidence=IEA] [GO:0070936 "protein K48-linked ubiquitination"
evidence=IEA] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA] [GO:0050681 "androgen receptor
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0044314 "protein
K27-linked ubiquitination" evidence=IEA] [GO:0030517 "negative
regulation of axon extension" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005737 GO:GO:0045893 GO:GO:0046872 GO:GO:0003677
GO:GO:0016605 GO:GO:0030424 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842 GO:GO:0060765
GO:GO:0070936 GO:GO:0085020 GO:GO:0030517 GO:GO:0044314
GeneTree:ENSGT00700000104290 EMBL:FP565336
Ensembl:ENSSSCT00000024194 OMA:ISRDHTR Uniprot:I3LHE1
Length = 578
Score = 131 (51.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 51 GLSASELDKLP----KISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWL 106
GL+ ++D L + SG++ + C+VC+ + + R +P C H FH+ C D WL
Sbjct: 498 GLTKEQIDNLSTRHYEHSGRDSDLARICSVCISDYVTGNKLRQLP-CMHEFHIHCIDRWL 556
Query: 107 SKHSVCPVCR 116
S++ CP+CR
Sbjct: 557 SENCTCPICR 566
>TAIR|locus:2160215 [details] [associations]
symbol:AT5G54990 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P28990
EMBL:AB005232 IPI:IPI00548980 RefSeq:NP_200310.1 UniGene:At.55556
ProteinModelPortal:Q9FFT1 SMR:Q9FFT1 EnsemblPlants:AT5G54990.1
GeneID:835590 KEGG:ath:AT5G54990 TAIR:At5g54990 eggNOG:NOG321518
HOGENOM:HOG000152444 InParanoid:Q9FFT1 OMA:RYISTES PhylomeDB:Q9FFT1
ProtClustDB:CLSN2916571 Genevestigator:Q9FFT1 Uniprot:Q9FFT1
Length = 226
Score = 123 (48.4 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 57 LDKLPKISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCR 116
+D K G LV +C +CL E+ S +P C+H FH C +WL K+ CP+CR
Sbjct: 157 IDCCCKQKGTCLVPALDCPICLTELSSGVSRMKLP-CSHVFHRDCIMTWLKKNPSCPICR 215
Query: 117 AK 118
K
Sbjct: 216 TK 217
>MGI|MGI:1918923 [details] [associations]
symbol:Rnf215 "ring finger protein 215" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 MGI:MGI:1918923 Prosite:PS00518 GO:GO:0016021
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 eggNOG:NOG260672 EMBL:AL807825 CTD:200312
HOGENOM:HOG000154164 HOVERGEN:HBG080631 OMA:EAPVEGW EMBL:AK002414
EMBL:BC103627 EMBL:BC115907 EMBL:BC115908 IPI:IPI00121433
RefSeq:NP_082135.2 UniGene:Mm.240586 ProteinModelPortal:Q5SPX3
SMR:Q5SPX3 PaxDb:Q5SPX3 PRIDE:Q5SPX3 Ensembl:ENSMUST00000003677
Ensembl:ENSMUST00000124670 Ensembl:ENSMUST00000145705 GeneID:71673
KEGG:mmu:71673 UCSC:uc007hui.1 GeneTree:ENSGT00530000063291
InParanoid:Q5SPX3 OrthoDB:EOG4D7Z6X NextBio:334197 Bgee:Q5SPX3
CleanEx:MM_RNF215 Genevestigator:Q5SPX3 Uniprot:Q5SPX3
Length = 379
Score = 128 (50.1 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 71 GTE-CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAK-LDSHF 123
GTE CAVCLD ++Q R++P C H FH C D WL CP+C+ L +H+
Sbjct: 323 GTETCAVCLDYFCNKQWLRVLP-CKHEFHRDCVDPWLMLQQTCPLCKFNVLGNHY 376
>UNIPROTKB|F1ND85 [details] [associations]
symbol:RNF215 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000063291 EMBL:AADN02050497 EMBL:AADN02050498
IPI:IPI00915203 Ensembl:ENSGALT00000038167 Uniprot:F1ND85
Length = 233
Score = 123 (48.4 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 74 CAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCR 116
CAVCLD+ Q R++P C+H FH C D WL CP+C+
Sbjct: 181 CAVCLDQFSKSQWLRVLP-CSHEFHRDCVDPWLLLQQTCPLCK 222
>RGD|2320624 [details] [associations]
symbol:LOC100364637 "ring finger protein 148-like" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 RGD:2320624 Pfam:PF02225 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104211 IPI:IPI00960085
Ensembl:ENSRNOT00000064228 Uniprot:F1M1T7
Length = 309
Score = 126 (49.4 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 31/102 (30%), Positives = 47/102 (46%)
Query: 21 IVYLSLLWCASNDNDNNGDVRLP--VKAAAEGGLSASELDKLPKISGKELVMGTE-CAVC 77
+ YL L+CA N R +K+ + + +L L K KEL + C VC
Sbjct: 208 VAYL-FLYCAWRPRAPNSSTRRQRQIKSDVKKAIGQLQLRVL-KEGDKELDPNEDSCVVC 265
Query: 78 LDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
D +++ R++ C H FH C D WL H CP+C+ +
Sbjct: 266 FDIYKAQDVIRILT-CKHFFHKTCIDPWLLAHRTCPMCKCDI 306
>UNIPROTKB|E2QUN1 [details] [associations]
symbol:RNF181 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 CTD:51255 OMA:EEQYRQN
EMBL:AAEX03010937 RefSeq:XP_532978.2 ProteinModelPortal:E2QUN1
Ensembl:ENSCAFT00000012302 GeneID:475768 KEGG:cfa:475768
Uniprot:E2QUN1
Length = 153
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 25/63 (39%), Positives = 35/63 (55%)
Query: 57 LDKLPKISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCR 116
++ LP+ + +C VCL E E E+ A +P C H FH C WLSK + CP+CR
Sbjct: 59 VENLPRTVIRSSQAELKCPVCLLEFEEEETAIEMP-CRHLFHSNCILPWLSKTNSCPLCR 117
Query: 117 AKL 119
+L
Sbjct: 118 HEL 120
>UNIPROTKB|F1SVB7 [details] [associations]
symbol:RNF181 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 CTD:51255 OMA:EEQYRQN EMBL:FP325280
EMBL:CU928286 RefSeq:NP_001230307.1 RefSeq:XP_003124989.1
UniGene:Ssc.18173 Ensembl:ENSSSCT00000009015
Ensembl:ENSSSCT00000028874 GeneID:100518605 GeneID:100628060
KEGG:ssc:100518605 KEGG:ssc:100628060 Uniprot:F1SVB7
Length = 153
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 57 LDKLPK--ISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPV 114
++ LP+ I G + + +C VCL E E E+ A +P C+H FH C WLSK + CP+
Sbjct: 59 VENLPRTVIRGSQAEL--KCPVCLLEFEEEETAIEMP-CHHLFHSGCILPWLSKTNSCPL 115
Query: 115 CRAKL 119
CR +L
Sbjct: 116 CRHEL 120
>TAIR|locus:2128293 [details] [associations]
symbol:RHA1B "RING-H2 finger A1B" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0046686
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL096882 EMBL:AL161531
GO:GO:0046872 GO:GO:0008270 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 HOGENOM:HOG000239353 KO:K16281
ProtClustDB:CLSN2685308 EMBL:AF078821 EMBL:DQ059119 EMBL:AY065243
EMBL:AY117300 EMBL:AY087618 IPI:IPI00538423 PIR:T13027 PIR:T51841
RefSeq:NP_192875.1 UniGene:At.20976 ProteinModelPortal:Q9SUS5
SMR:Q9SUS5 STRING:Q9SUS5 EnsemblPlants:AT4G11360.1 GeneID:826738
KEGG:ath:AT4G11360 GeneFarm:4091 TAIR:At4g11360 eggNOG:NOG268018
InParanoid:Q9SUS5 OMA:DWFRDEV PhylomeDB:Q9SUS5
Genevestigator:Q9SUS5 Uniprot:Q9SUS5
Length = 157
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 28/89 (31%), Positives = 43/89 (48%)
Query: 32 NDNDNNGDVRLPVKAAAEGGLSASELDKLPKISGKELVMGTE--CAVCLDEVESEQPARL 89
N+ + RL + +A A+EL +P + +L+ E C VCL + S+ R
Sbjct: 46 NETSRSDPTRLALSTSAT---LANEL--IPVVRFSDLLTDPEDCCTVCLSDFVSDDKIRQ 100
Query: 90 VPGCNHGFHLQCADSWL--SKHSVCPVCR 116
+P C H FH +C D W+ CP+CR
Sbjct: 101 LPKCGHVFHHRCLDRWIVDCNKITCPICR 129
>TAIR|locus:2055435 [details] [associations]
symbol:AT2G34000 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC002341
EMBL:DQ059092 EMBL:BT029341 IPI:IPI00544559 PIR:B84751
RefSeq:NP_180947.1 UniGene:At.53025 ProteinModelPortal:O22953
SMR:O22953 PRIDE:O22953 EnsemblPlants:AT2G34000.1 GeneID:817961
KEGG:ath:AT2G34000 TAIR:At2g34000 eggNOG:NOG251402
HOGENOM:HOG000114083 InParanoid:O22953 OMA:WLESHAT PhylomeDB:O22953
ProtClustDB:CLSN2913116 Genevestigator:O22953 Uniprot:O22953
Length = 151
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 39/121 (32%), Positives = 51/121 (42%)
Query: 3 VSVILALFLPCAGMSLVFIVYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELDKLPK 62
+SVI AL + C F V +N+N G R P +G LSAS + P
Sbjct: 24 ISVIFALLIICLLKRRRFDV------SPETENENQGR-REP---RCQG-LSASVIAAFPT 72
Query: 63 ISGK-------ELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVC 115
S K EC VCL + +++P C H F +C WL H+ CPVC
Sbjct: 73 FSYKPDNNDPESNNQEIECPVCLGLIPKNVVIKVLPNCMHMFDEECIGKWLESHATCPVC 132
Query: 116 R 116
R
Sbjct: 133 R 133
>MGI|MGI:1918550 [details] [associations]
symbol:Rnf148 "ring finger protein 148" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 MGI:MGI:1918550 Pfam:PF02225
Prosite:PS00518 GO:GO:0016021 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:CH466533
GeneTree:ENSGT00700000104211 HOGENOM:HOG000231432
HOVERGEN:HBG057659 CTD:378925 eggNOG:NOG254647 OMA:IDPWLLA
EMBL:AY155440 EMBL:AK017027 EMBL:AC155850 RefSeq:NP_082030.1
UniGene:Mm.443309 ProteinModelPortal:G3X9R7 SMR:G3X9R7 PRIDE:G3X9R7
Ensembl:ENSMUST00000104979 GeneID:71300 KEGG:mmu:71300
NextBio:333489 Bgee:G3X9R7 Uniprot:G3X9R7
Length = 316
Score = 126 (49.4 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 29/101 (28%), Positives = 48/101 (47%)
Query: 21 IVYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELD-KLPKISGKELVMGTE-CAVCL 78
+ YL L+CA +N R + A+ + +L ++ + KEL + C VC
Sbjct: 215 VTYL-FLYCAWRPRVSNSSTRRQRQLKADVKKAIGQLQLRVLQDGDKELDPNEDSCVVCF 273
Query: 79 DEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKL 119
D +++ R++ C H FH C D WL H CP+C+ +
Sbjct: 274 DMYKAQDVIRILT-CKHFFHKTCIDPWLLAHRTCPMCKCDI 313
>UNIPROTKB|F1NS28 [details] [associations]
symbol:RNF128 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0042036 "negative regulation of cytokine
biosynthetic process" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
GO:GO:0005783 GO:GO:0005794 GO:GO:0046872 GO:GO:0008270
GO:GO:0005770 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0042036 GeneTree:ENSGT00700000104211 OMA:HEASSMA
EMBL:AADN02013647 EMBL:AADN02013648 IPI:IPI00575054
Ensembl:ENSGALT00000032298 Uniprot:F1NS28
Length = 418
Score = 128 (50.1 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 44 VKAAAEGGLSASELDKLPKISGKELVM-GTECAVCLDEVESEQPARLVPGCNHGFHLQCA 102
+KA A+ + +L L K KE G CAVC++ + + R++ CNH FH C
Sbjct: 242 LKAEAKKAIGQLQLRTL-KQGDKETGPDGDSCAVCIELYKPNEVVRILT-CNHLFHKNCI 299
Query: 103 DSWLSKHSVCPVCRAKL 119
D WL +H CP+C+ +
Sbjct: 300 DPWLLEHRTCPMCKCDI 316
>POMBASE|SPBP4H10.07 [details] [associations]
symbol:SPBP4H10.07 "ubiquitin-protein ligase E3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=ISM] [GO:0016020 "membrane" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISM]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
PomBase:SPBP4H10.07 Prosite:PS00518 GO:GO:0016020 GO:GO:0046872
EMBL:CU329671 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 eggNOG:NOG291583 EMBL:AB027922 RefSeq:NP_596181.1
ProteinModelPortal:Q9P7E1 EnsemblFungi:SPBP4H10.07.1 GeneID:2541304
KEGG:spo:SPBP4H10.07 OrthoDB:EOG4FFHBH NextBio:20802414
Uniprot:Q9P7E1
Length = 583
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 29/68 (42%), Positives = 35/68 (51%)
Query: 54 ASELDKLPKISGKELVMGTE--CAVCLDEVESEQPARLVPGCNHGFHLQCADSWL-SKHS 110
AS+ D L K G GT+ C VCL E R + CNH FH +C D WL S +
Sbjct: 504 ASQKD-LEKAGGVFPFSGTDERCLVCLSNFELNDECRRLKQCNHFFHRECIDQWLTSSQN 562
Query: 111 VCPVCRAK 118
CP+CR K
Sbjct: 563 SCPLCRTK 570
>RGD|1566282 [details] [associations]
symbol:Rnf128 "ring finger protein 128, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0005770
"late endosome" evidence=IEA;ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0042036
"negative regulation of cytokine biosynthetic process"
evidence=IEA;ISO] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 RGD:1566282 Pfam:PF02225
GO:GO:0005783 GO:GO:0005794 GO:GO:0046872 GO:GO:0008270
GO:GO:0005770 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0042036 GeneTree:ENSGT00700000104211 HOGENOM:HOG000231432
HOVERGEN:HBG057659 CTD:79589 eggNOG:NOG271676 KO:K10629
OrthoDB:EOG4JT06C OMA:HEASSMA EMBL:BC167061 IPI:IPI00955613
RefSeq:NP_001166820.1 UniGene:Rn.7002 Ensembl:ENSRNOT00000016100
GeneID:315911 KEGG:rno:315911 NextBio:670050 Genevestigator:B2RZ84
Uniprot:B2RZ84
Length = 428
Score = 128 (50.1 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 44 VKAAAEGGLSASELDKLPKISGKELVM-GTECAVCLDEVESEQPARLVPGCNHGFHLQCA 102
+KA A+ + +L L K KE+ G CAVC++ + R++ CNH FH C
Sbjct: 247 LKADAKKAIGRLQLRTL-KQGDKEIGPDGDSCAVCIELYKPNDVVRILT-CNHIFHKTCV 304
Query: 103 DSWLSKHSVCPVCRAKL 119
D WL +H CP+C+ +
Sbjct: 305 DPWLLEHRTCPMCKCDI 321
>UNIPROTKB|F1P2W8 [details] [associations]
symbol:ZNRF3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000063291 EMBL:AADN02043260 IPI:IPI00819236
Ensembl:ENSGALT00000038546 ArrayExpress:F1P2W8 Uniprot:F1P2W8
Length = 712
Score = 131 (51.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 31/117 (26%), Positives = 56/117 (47%)
Query: 3 VSVILALFLPCAGMSLVFIVYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELDKLPK 62
+ + LA F+ + + L+ +V + L S ++ N V+ K S S+ +
Sbjct: 124 MGIFLAFFVVVSLVCLILLVKIKLKQRRSQNSMNRLAVQALEKMETRKFKSKSKGHREGS 183
Query: 63 ISGKELVMGT---ECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCR 116
+ + + +CA+CL++ + R++P C H FH +C D WL +H CP CR
Sbjct: 184 CGALDTLSSSSTSDCAICLEKYIDGEELRVIP-CTHRFHKKCVDPWLLQHHTCPHCR 239
>UNIPROTKB|F1MCR4 [details] [associations]
symbol:RNF128 "E3 ubiquitin-protein ligase RNF128"
species:9913 "Bos taurus" [GO:0042036 "negative regulation of
cytokine biosynthetic process" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005770 "late endosome" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
GO:GO:0005783 GO:GO:0005794 GO:GO:0046872 GO:GO:0008270
GO:GO:0005770 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0042036 GeneTree:ENSGT00700000104211 IPI:IPI00715186
UniGene:Bt.29416 OMA:HEASSMA EMBL:DAAA02071287
ProteinModelPortal:F1MCR4 Ensembl:ENSBTAT00000031148 Uniprot:F1MCR4
Length = 431
Score = 128 (50.1 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 44 VKAAAEGGLSASELDKLPKISGKELVM-GTECAVCLDEVESEQPARLVPGCNHGFHLQCA 102
+KA A+ + +L L K KE+ G CAVC++ + R++ CNH FH C
Sbjct: 250 LKADAKKAIGRLQLRTL-KQGDKEIGPDGDSCAVCIELYKPNDLVRILT-CNHVFHKTCV 307
Query: 103 DSWLSKHSVCPVCRAKL 119
D WL +H CP+C+ +
Sbjct: 308 DPWLLEHRTCPMCKCDI 324
>TAIR|locus:2092271 [details] [associations]
symbol:AT3G19910 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
GO:GO:0051865 EMBL:AB025631 EMBL:AY045590 EMBL:AY045984
EMBL:AY079353 EMBL:AY084453 IPI:IPI00540114 RefSeq:NP_566651.1
UniGene:At.19776 ProteinModelPortal:Q9LT17 SMR:Q9LT17 STRING:Q9LT17
PaxDb:Q9LT17 PRIDE:Q9LT17 EnsemblPlants:AT3G19910.1 GeneID:821529
KEGG:ath:AT3G19910 TAIR:At3g19910 eggNOG:NOG313539
HOGENOM:HOG000239779 InParanoid:Q9LT17 OMA:HANEDDQ PhylomeDB:Q9LT17
ProtClustDB:CLSN2688581 Genevestigator:Q9LT17 Uniprot:Q9LT17
Length = 340
Score = 126 (49.4 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 27/75 (36%), Positives = 41/75 (54%)
Query: 51 GLSASELDKLPKISGKE--LVMGTE--CAVCLDEVESEQPARLVPGCNHGFHLQCADSWL 106
GLSA + LP KE GT C +C + E ++ L+P C H +H +C ++WL
Sbjct: 261 GLSADTIASLPSKRYKEGDNQNGTNESCVICRLDYEDDEDLILLP-CKHSYHSECINNWL 319
Query: 107 SKHSVCPVCRAKLDS 121
+ VCPVC A++ +
Sbjct: 320 KINKVCPVCSAEVST 334
>TAIR|locus:2100021 [details] [associations]
symbol:SDIR1 "SALT- AND DROUGHT-INDUCED RING FINGER1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP] [GO:0009789
"positive regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0006301 "postreplication
repair" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0005783
GO:GO:0043231 GO:GO:0016021 GO:GO:0009737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009789 GO:GO:0046872 GO:GO:0009651
GO:GO:0009414 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0031090 EMBL:AL132975
UniGene:At.28462 UniGene:At.48772 EMBL:AF386995 EMBL:BT006305
EMBL:AK317055 IPI:IPI00546001 PIR:T47692 RefSeq:NP_191112.1
ProteinModelPortal:Q9M2S6 SMR:Q9M2S6 STRING:Q9M2S6
EnsemblPlants:AT3G55530.1 GeneID:824718 KEGG:ath:AT3G55530
TAIR:At3g55530 eggNOG:NOG316504 HOGENOM:HOG000005982
InParanoid:Q9M2S6 KO:K16283 OMA:RAMRIHA PhylomeDB:Q9M2S6
ProtClustDB:CLSN2685302 Genevestigator:Q9M2S6 Uniprot:Q9M2S6
Length = 273
Score = 124 (48.7 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 30/88 (34%), Positives = 45/88 (51%)
Query: 48 AEGGLSASELDKLPKISGKELVMGTE----CAVCLDEVESEQPARLVPGCNHGFHLQCAD 103
A+ ++S +K+ S E GTE C+VCL++V + R +P C H FH C D
Sbjct: 182 AKQASTSSSAEKMLD-SANESKKGTEDELTCSVCLEQVTVGEIVRTLP-CLHQFHAGCID 239
Query: 104 SWLSKHSVCPVCRAKLDSHFFNALESDN 131
WL + CPVC+ + S + E D+
Sbjct: 240 PWLRQQGTCPVCKFRAHSGWQEQDEIDD 267
>RGD|1306092 [details] [associations]
symbol:Rnf6 "ring finger protein (C3H2C3 type) 6" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0016605 "PML body" evidence=ISO]
[GO:0030424 "axon" evidence=ISO] [GO:0030517 "negative regulation
of axon extension" evidence=ISO] [GO:0044314 "protein K27-linked
ubiquitination" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0050681 "androgen
receptor binding" evidence=ISO] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=ISO] [GO:0070936 "protein
K48-linked ubiquitination" evidence=ISO] [GO:0085020 "protein
K6-linked ubiquitination" evidence=ISO] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 RGD:1306092
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
IPI:IPI00778739 Ensembl:ENSRNOT00000059600 ArrayExpress:D3ZTS3
Uniprot:D3ZTS3
Length = 663
Score = 130 (50.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 25/70 (35%), Positives = 40/70 (57%)
Query: 51 GLSASELDKLPKISGKELVMGTE----CAVCLDEVESEQPARLVPGCNHGFHLQCADSWL 106
GL+ ++D L S ++ + +E C+VC+ + + R +P C H FH+ C D WL
Sbjct: 583 GLTKEQIDNLSTRSYEQSAVDSELGKVCSVCISDYVAGNKLRQLP-CLHEFHIHCIDRWL 641
Query: 107 SKHSVCPVCR 116
S++ CPVCR
Sbjct: 642 SENCTCPVCR 651
>UNIPROTKB|F1S6C0 [details] [associations]
symbol:LOC100620409 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104290 EMBL:FP016256 RefSeq:XP_003357420.1
RefSeq:XP_003357421.1 Ensembl:ENSSSCT00000016632
Ensembl:ENSSSCT00000026015 GeneID:100620318 GeneID:100620409
KEGG:ssc:100620318 KEGG:ssc:100620409 Uniprot:F1S6C0
Length = 141
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 25/71 (35%), Positives = 35/71 (49%)
Query: 55 SELDKLPK-----ISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKH 109
S++ LPK +E + ECA+C + P R +P C H +HL C D WL++
Sbjct: 62 SQIQCLPKGVYKRDGSQEKMEQEECAICTLDFVCGDPIRSLP-CKHFYHLGCIDEWLTRS 120
Query: 110 SVCPVCRAKLD 120
CP CR D
Sbjct: 121 FTCPYCRGPAD 131
>TAIR|locus:2092895 [details] [associations]
symbol:AT3G13430 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0006944 "cellular membrane fusion"
evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded protein
response" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002686 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AP000603
HSSP:Q9LRB7 KO:K11982 IPI:IPI00530368 RefSeq:NP_001030687.1
RefSeq:NP_001189879.1 RefSeq:NP_187951.1 UniGene:At.43471
UniGene:At.63540 ProteinModelPortal:Q9LJE9 SMR:Q9LJE9 STRING:Q9LJE9
EnsemblPlants:AT3G13430.1 EnsemblPlants:AT3G13430.2
EnsemblPlants:AT3G13430.3 GeneID:820543 KEGG:ath:AT3G13430
TAIR:At3g13430 InParanoid:Q9LJE9 OMA:RRIRTRH PhylomeDB:Q9LJE9
ProtClustDB:CLSN2684775 Genevestigator:Q9LJE9 Uniprot:Q9LJE9
Length = 315
Score = 125 (49.1 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 73 ECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCR 116
+C+VCLD+ E A+ +P C H FH C WL HS CPVCR
Sbjct: 224 QCSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCR 266
>UNIPROTKB|F1NBB2 [details] [associations]
symbol:ZNRF3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005109
"frizzled binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0038018 "Wnt receptor
catabolic process" evidence=IEA] [GO:0060070 "canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0060071 "Wnt receptor
signaling pathway, planar cell polarity pathway" evidence=IEA]
[GO:0072089 "stem cell proliferation" evidence=IEA] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:2000051 "negative regulation of non-canonical Wnt
receptor signaling pathway" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005887
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0090090 GO:GO:0004842
GeneTree:ENSGT00530000063291 OMA:GNPSAVC GO:GO:2000051
EMBL:AADN02043260 IPI:IPI00594549 Ensembl:ENSGALT00000009318
ArrayExpress:F1NBB2 Uniprot:F1NBB2
Length = 837
Score = 131 (51.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 31/117 (26%), Positives = 56/117 (47%)
Query: 3 VSVILALFLPCAGMSLVFIVYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELDKLPK 62
+ + LA F+ + + L+ +V + L S ++ N V+ K S S+ +
Sbjct: 122 MGIFLAFFVVVSLVCLILLVKIKLKQRRSQNSMNRLAVQALEKMETRKFKSKSKGHREGS 181
Query: 63 ISGKELVMGT---ECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCR 116
+ + + +CA+CL++ + R++P C H FH +C D WL +H CP CR
Sbjct: 182 CGALDTLSSSSTSDCAICLEKYIDGEELRVIP-CTHRFHKKCVDPWLLQHHTCPHCR 237
>UNIPROTKB|Q8TEB7 [details] [associations]
symbol:RNF128 "E3 ubiquitin-protein ligase RNF128"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0042036 "negative regulation of cytokine
biosynthetic process" evidence=IEA] [GO:0012505 "endomembrane
system" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 InterPro:IPR003137 EMBL:AF394689
Pfam:PF02225 Prosite:PS00518 GO:GO:0005783 GO:GO:0016021
GO:GO:0005794 GO:GO:0048471 GO:GO:0046872
Pathway_Interaction_DB:nfat_tfpathway GO:GO:0008270 GO:GO:0012505
GO:GO:0005770 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0042036 HOGENOM:HOG000231432 HOVERGEN:HBG057659 CTD:79589
eggNOG:NOG271676 KO:K10629 EMBL:AK027169 EMBL:AK074264
EMBL:AK126553 EMBL:AL391315 EMBL:AL606833 EMBL:BC056677
EMBL:BC063404 IPI:IPI00152698 IPI:IPI00376602 RefSeq:NP_078815.3
RefSeq:NP_919445.1 UniGene:Hs.496542 PDB:3ICU PDBsum:3ICU
ProteinModelPortal:Q8TEB7 SMR:Q8TEB7 IntAct:Q8TEB7 STRING:Q8TEB7
PhosphoSite:Q8TEB7 DMDM:74751443 PRIDE:Q8TEB7 DNASU:79589
Ensembl:ENST00000255499 Ensembl:ENST00000324342 GeneID:79589
KEGG:hsa:79589 UCSC:uc004emk.3 UCSC:uc004eml.3
GeneCards:GC0XP105937 HGNC:HGNC:21153 HPA:HPA019675 MIM:300439
neXtProt:NX_Q8TEB7 PharmGKB:PA134868457 InParanoid:Q8TEB7
OMA:HEASSMA PhylomeDB:Q8TEB7 EvolutionaryTrace:Q8TEB7
GenomeRNAi:79589 NextBio:68594 ArrayExpress:Q8TEB7 Bgee:Q8TEB7
CleanEx:HS_RNF128 Genevestigator:Q8TEB7 Uniprot:Q8TEB7
Length = 428
Score = 127 (49.8 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 44 VKAAAEGGLSASELDKLPKISGKELVM-GTECAVCLDEVESEQPARLVPGCNHGFHLQCA 102
+KA A+ + +L L K KE+ G CAVC++ + R++ CNH FH C
Sbjct: 247 LKADAKKAIGRLQLRTL-KQGDKEIGPDGDSCAVCIELYKPNDLVRILT-CNHIFHKTCV 304
Query: 103 DSWLSKHSVCPVCRAKL 119
D WL +H CP+C+ +
Sbjct: 305 DPWLLEHRTCPMCKCDI 321
>MGI|MGI:1914139 [details] [associations]
symbol:Rnf128 "ring finger protein 128" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005770
"late endosome" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISA;IDA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0042036 "negative regulation of
cytokine biosynthetic process" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 MGI:MGI:1914139 Pfam:PF02225 Prosite:PS00518
GO:GO:0005783 GO:GO:0016021 GO:GO:0005794 GO:GO:0048471
GO:GO:0046872 GO:GO:0008270 GO:GO:0012505 GO:GO:0005770
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
GO:GO:0042036 GeneTree:ENSGT00700000104211 HOGENOM:HOG000231432
HOVERGEN:HBG057659 CTD:79589 eggNOG:NOG271676 KO:K10629
OrthoDB:EOG4JT06C EMBL:AY112656 EMBL:AF426411 EMBL:AB041548
EMBL:AK004847 EMBL:AK008312 EMBL:AK018582 EMBL:AK146266
EMBL:AK167031 EMBL:BC010477 IPI:IPI00331363 RefSeq:NP_001241690.1
RefSeq:NP_075759.3 UniGene:Mm.27764 ProteinModelPortal:Q9D304
SMR:Q9D304 STRING:Q9D304 PhosphoSite:Q9D304 PRIDE:Q9D304
Ensembl:ENSMUST00000113026 GeneID:66889 KEGG:mmu:66889
InParanoid:Q9D304 NextBio:322937 Bgee:Q9D304 CleanEx:MM_RNF128
Genevestigator:Q9D304 GermOnline:ENSMUSG00000031438 Uniprot:Q9D304
Length = 428
Score = 127 (49.8 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 44 VKAAAEGGLSASELDKLPKISGKELVM-GTECAVCLDEVESEQPARLVPGCNHGFHLQCA 102
+KA A+ + +L L K KE+ G CAVC++ + R++ CNH FH C
Sbjct: 247 LKADAKKAIGKLQLRTL-KQGDKEIGPDGDSCAVCIELYKPNDLVRILT-CNHIFHKTCV 304
Query: 103 DSWLSKHSVCPVCRAKL 119
D WL +H CP+C+ +
Sbjct: 305 DPWLLEHRTCPMCKCDI 321
>UNIPROTKB|Q29RU0 [details] [associations]
symbol:RNF128 "E3 ubiquitin-protein ligase RNF128"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0012505 "endomembrane system" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 InterPro:IPR003137 Pfam:PF02225
Prosite:PS00518 GO:GO:0016021 GO:GO:0048471 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0012505 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 HOGENOM:HOG000231432
HOVERGEN:HBG057659 EMBL:BC114021 IPI:IPI00715186
RefSeq:NP_001069539.1 UniGene:Bt.29416 ProteinModelPortal:Q29RU0
PRIDE:Q29RU0 GeneID:535869 KEGG:bta:535869 CTD:79589
eggNOG:NOG271676 InParanoid:Q29RU0 KO:K10629 OrthoDB:EOG4JT06C
NextBio:20876846 Uniprot:Q29RU0
Length = 431
Score = 127 (49.8 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 44 VKAAAEGGLSASELDKLPKISGKELVM-GTECAVCLDEVESEQPARLVPGCNHGFHLQCA 102
+KA A+ + +L + K KE+ G CAVC++ + R++ CNH FH C
Sbjct: 250 LKADAKKAIGRLQL-RTQKQGDKEIGPDGDSCAVCIELYKPNDLVRILT-CNHVFHKTCV 307
Query: 103 DSWLSKHSVCPVCRAKL 119
D WL +H CP+C+ +
Sbjct: 308 DPWLLEHRTCPMCKCDI 324
>UNIPROTKB|E2RG93 [details] [associations]
symbol:RNF128 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042036 "negative regulation of cytokine
biosynthetic process" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
GO:GO:0005783 GO:GO:0005794 GO:GO:0046872 GO:GO:0008270
GO:GO:0005770 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0042036 GeneTree:ENSGT00700000104211 CTD:79589 KO:K10629
OMA:HEASSMA EMBL:AAEX03026747 RefSeq:XP_549171.3
Ensembl:ENSCAFT00000028462 GeneID:492051 KEGG:cfa:492051
NextBio:20864714 Uniprot:E2RG93
Length = 431
Score = 127 (49.8 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 44 VKAAAEGGLSASELDKLPKISGKELVM-GTECAVCLDEVESEQPARLVPGCNHGFHLQCA 102
+KA A+ + +L L K KE+ G CAVC++ + R++ CNH FH C
Sbjct: 250 LKADAKKAIGRLQLRTL-KQGDKEIGPDGDSCAVCIELYKPNDLVRILT-CNHIFHKTCV 307
Query: 103 DSWLSKHSVCPVCRAKL 119
D WL +H CP+C+ +
Sbjct: 308 DPWLLEHRTCPMCKCDI 324
>UNIPROTKB|F1RXM2 [details] [associations]
symbol:LOC100515872 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0042036 "negative regulation of cytokine
biosynthetic process" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104211 KO:K10629 OMA:HEASSMA EMBL:CU638669
EMBL:CU914612 RefSeq:XP_003135339.3 Ensembl:ENSSSCT00000013723
GeneID:100515872 KEGG:ssc:100515872 Uniprot:F1RXM2
Length = 431
Score = 127 (49.8 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 44 VKAAAEGGLSASELDKLPKISGKELVM-GTECAVCLDEVESEQPARLVPGCNHGFHLQCA 102
+KA A+ + +L L K KE+ G CAVC++ + R++ CNH FH C
Sbjct: 250 LKADAKKAIGRLQLRTL-KQGDKEIGPDGDSCAVCIELYKPNDLVRILT-CNHIFHKTCV 307
Query: 103 DSWLSKHSVCPVCRAKL 119
D WL +H CP+C+ +
Sbjct: 308 DPWLLEHRTCPMCKCDI 324
>UNIPROTKB|B4DDP0 [details] [associations]
symbol:RNF6 "cDNA FLJ53858, highly similar to RING finger
protein 6" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL138966
RefSeq:NP_898864.1 UniGene:Hs.136885 DNASU:6049 GeneID:6049
KEGG:hsa:6049 CTD:6049 HGNC:HGNC:10069 PharmGKB:PA34443
GenomeRNAi:6049 NextBio:23569 EMBL:AK293272 IPI:IPI01012568
ProteinModelPortal:B4DDP0 SMR:B4DDP0 STRING:B4DDP0
Ensembl:ENST00000399762 UCSC:uc010tdk.2 HOVERGEN:HBG102156
ArrayExpress:B4DDP0 Bgee:B4DDP0 Uniprot:B4DDP0
Length = 329
Score = 125 (49.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 51 GLSASELDKLP----KISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWL 106
GL+ ++D L + + + +G C+VC+ + + R +P C H FH+ C D WL
Sbjct: 249 GLTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLP-CMHEFHIHCIDRWL 307
Query: 107 SKHSVCPVCRAK-LDSHFFN 125
S++ CP+CR L S+ N
Sbjct: 308 SENCTCPICRQPVLGSNIAN 327
WARNING: HSPs involving 357 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.435 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 133 133 0.00091 102 3 11 22 0.39 31
30 0.43 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 607
No. of states in DFA: 590 (63 KB)
Total size of DFA: 147 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.85u 0.12s 13.97t Elapsed: 00:00:01
Total cpu time: 13.87u 0.12s 13.99t Elapsed: 00:00:01
Start: Mon May 20 23:47:33 2013 End: Mon May 20 23:47:34 2013
WARNINGS ISSUED: 2