BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037531
(106 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1Z7Y|A Chain A, Crystal Structure Of The Arabidopsis Thaliana
O-Acetylserine Sulfhydrylase K46a Mutant
Length = 322
Score = 118 bits (295), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 72/100 (72%)
Query: 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXX 61
HKIQGIG GF+PSVL+V ++DEVV+V+S+E+I A+ L KEGLLVGISSG
Sbjct: 221 HKIQGIGAGFIPSVLNVDLIDEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKL 280
Query: 62 XXXXENAGKLIVVIFPSSGERYLSSEMFDAERQAAENMAY 101
ENAGKL V IFPS GERYLS+ +FDA R+ AE M +
Sbjct: 281 AQRPENAGKLFVAIFPSFGERYLSTVLFDATRKEAEAMTF 320
>pdb|1Z7W|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase From
Arabidopsis Thaliana
Length = 322
Score = 117 bits (294), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 72/100 (72%)
Query: 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXX 61
HKIQGIG GF+PSVL+V ++DEVV+V+S+E+I A+ L KEGLLVGISSG
Sbjct: 221 HKIQGIGAGFIPSVLNVDLIDEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKL 280
Query: 62 XXXXENAGKLIVVIFPSSGERYLSSEMFDAERQAAENMAY 101
ENAGKL V IFPS GERYLS+ +FDA R+ AE M +
Sbjct: 281 AQRPENAGKLFVAIFPSFGERYLSTVLFDATRKEAEAMTF 320
>pdb|2ISQ|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase From
Arabidopsis Thaliana In Complex With C-Terminal Peptide
From Arabidopsis Serine Acetyltransferase
Length = 320
Score = 117 bits (294), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 72/100 (72%)
Query: 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXX 61
HKIQGIG GF+PSVL+V ++DEVV+V+S+E+I A+ L KEGLLVGISSG
Sbjct: 219 HKIQGIGAGFIPSVLNVDLIDEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKL 278
Query: 62 XXXXENAGKLIVVIFPSSGERYLSSEMFDAERQAAENMAY 101
ENAGKL V IFPS GERYLS+ +FDA R+ AE M +
Sbjct: 279 AQRPENAGKLFVAIFPSFGERYLSTVLFDATRKEAEAMTF 318
>pdb|4AEC|A Chain A, Crystal Structure Of The Arabidopsis Thaliana O-Acetyl-
Serine-(Thiol)-Lyase C
pdb|4AEC|B Chain B, Crystal Structure Of The Arabidopsis Thaliana O-Acetyl-
Serine-(Thiol)-Lyase C
Length = 430
Score = 111 bits (278), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 67/98 (68%)
Query: 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXX 61
HKIQGIG GF+P LD I+DEV+ ++S EAI+TAK L KEGL+VGISSG
Sbjct: 329 HKIQGIGAGFIPKNLDQKIMDEVIAISSEEAIETAKQLALKEGLMVGISSGAAAAAAIKV 388
Query: 62 XXXXENAGKLIVVIFPSSGERYLSSEMFDAERQAAENM 99
ENAGKLI V+FPS GERYLS+ +F + R+ E M
Sbjct: 389 AKRPENAGKLIAVVFPSFGERYLSTPLFQSIREEVEKM 426
>pdb|3VC3|A Chain A, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|B Chain B, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|C Chain C, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|D Chain D, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|E Chain E, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|F Chain F, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
Length = 344
Score = 99.8 bits (247), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 66/102 (64%)
Query: 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXX 61
H I G G+GF P +LD+ ++++V+ V+S +A+ A++L KEGL+VGISSG
Sbjct: 241 HHITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISSGANTVAALRL 300
Query: 62 XXXXENAGKLIVVIFPSSGERYLSSEMFDAERQAAENMAYVS 103
EN GKLIV + PS GERYLSS +F RQ AENM V+
Sbjct: 301 AQLPENKGKLIVTVHPSFGERYLSSVLFQELRQEAENMQPVA 342
>pdb|3VBE|A Chain A, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean
pdb|3VBE|B Chain B, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean
pdb|3VBE|C Chain C, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean
pdb|3VBE|D Chain D, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean
Length = 344
Score = 99.8 bits (247), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 66/102 (64%)
Query: 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXX 61
H I G G+GF P +LD+ ++++V+ V+S +A+ A++L KEGL+VGISSG
Sbjct: 241 HHITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISSGANTVAALRL 300
Query: 62 XXXXENAGKLIVVIFPSSGERYLSSEMFDAERQAAENMAYVS 103
EN GKLIV + PS GERYLSS +F RQ AENM V+
Sbjct: 301 AQLPENKGKLIVTVHPSFGERYLSSVLFQELRQEAENMQPVA 342
>pdb|3RR2|A Chain A, Structure Of A Cysteine Synthase (O-Acetylserine
Sulfhydrylase (Oass)) From Mycobacterium Marinum Atcc
Baa-535 M
Length = 314
Score = 97.1 bits (240), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%)
Query: 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXX 61
H IQGIG GFVP VLD++++DEV+ V +++A++ A+ + +EGLLVGISSG
Sbjct: 222 HPIQGIGAGFVPPVLDLALVDEVITVGNDDALELARRMATEEGLLVGISSGAAVWAAREL 281
Query: 62 XXXXENAGKLIVVIFPSSGERYLSSEMF 89
ENAGKLIVV+ P GERYLS+ +F
Sbjct: 282 AHRPENAGKLIVVVLPDFGERYLSTVLF 309
>pdb|2Q3B|A Chain A, 1.8 A Resolution Crystal Structure Of O-Acetylserine
Sulfhydrylase (Oass) Holoenzyme From Mycobacterium
Tuberculosis
pdb|2Q3C|A Chain A, 2.1 A Resolution Crystal Structure Of O-Acetylserine
Sulfhydrylase (Oass) Holoenzyme From Mycobacterium
Tuberculosis In Complex With The Inhibitory Peptide Dfsi
Length = 313
Score = 95.9 bits (237), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 58/88 (65%)
Query: 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXX 61
H IQGIG GFVP VLD ++DE++ V + +A+ A+ L +EGLLVGISSG
Sbjct: 221 HPIQGIGAGFVPPVLDQDLVDEIITVGNEDALNVARRLAREEGLLVGISSGAATVAALQV 280
Query: 62 XXXXENAGKLIVVIFPSSGERYLSSEMF 89
ENAGKLIVV+ P GERYLS+ +F
Sbjct: 281 ARRPENAGKLIVVVLPDFGERYLSTPLF 308
>pdb|2Q3D|A Chain A, 2.2 A Resolution Crystal Structure Of O-acetylserine
Sulfhydrylase (oass) From Mycobacterium Tuberculosis In
Complex With The Reaction Intermediate
Alpha-aminoacrylate
Length = 313
Score = 95.9 bits (237), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 58/88 (65%)
Query: 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXX 61
H IQGIG GFVP VLD ++DE++ V + +A+ A+ L +EGLLVGISSG
Sbjct: 221 HPIQGIGAGFVPPVLDQDLVDEIITVGNEDALNVARRLAREEGLLVGISSGAATVAALQV 280
Query: 62 XXXXENAGKLIVVIFPSSGERYLSSEMF 89
ENAGKLIVV+ P GERYLS+ +F
Sbjct: 281 ARRPENAGKLIVVVLPDFGERYLSTPLF 308
>pdb|4I1Y|A Chain A, The Structure Of Cysteine Synthase From Mycobacterium
Ulcerans Agy99
pdb|4I1Y|B Chain B, The Structure Of Cysteine Synthase From Mycobacterium
Ulcerans Agy99
pdb|4I1Y|C Chain C, The Structure Of Cysteine Synthase From Mycobacterium
Ulcerans Agy99
pdb|4I1Y|D Chain D, The Structure Of Cysteine Synthase From Mycobacterium
Ulcerans Agy99
Length = 314
Score = 95.1 bits (235), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 61/88 (69%)
Query: 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXX 61
H IQGIG GFVP VLD++++DEV+ V +++A++ A+ + +EGLL GISSG
Sbjct: 222 HPIQGIGAGFVPPVLDLALVDEVITVGNDDALELARRMATEEGLLFGISSGAAVWAAREL 281
Query: 62 XXXXENAGKLIVVIFPSSGERYLSSEMF 89
ENAGKLIVV+ P GERYLS+ +F
Sbjct: 282 AHRPENAGKLIVVVLPDFGERYLSTVLF 309
>pdb|1Y7L|A Chain A, O-Acetylserine Sulfhydrylase Complex
pdb|3IQG|X Chain X, Structure Of O-Acetylserine Sulfhydrylase In Complex With
Peptide Mnwni
pdb|3IQH|X Chain X, Structure Of O-Acetylserine Sulfhydrylase In Complex With
Peptide Mnydi
pdb|3IQI|X Chain X, Structure Of O-Acetylserine Sulfhydrylase In Complex With
Peptide Mneni
Length = 316
Score = 89.4 bits (220), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 59/89 (66%)
Query: 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXX 61
HKIQGIG GF+P LD+SI+D V V S+ A+ TA+ L A+EG+L GISSG
Sbjct: 224 HKIQGIGAGFIPKNLDLSIIDRVETVDSDTALATARRLMAEEGILAGISSGAAVAAADRL 283
Query: 62 XXXXENAGKLIVVIFPSSGERYLSSEMFD 90
E A KLIVVI PS+ ERYLS+ +F+
Sbjct: 284 AKLPEFADKLIVVILPSASERYLSTALFE 312
>pdb|1D6S|A Chain A, Crystal Structure Of The K41a Mutant Of O-Acetylserine
Sulfhydrylase Complexed In External Aldimine Linkage
With Methionine
pdb|1D6S|B Chain B, Crystal Structure Of The K41a Mutant Of O-Acetylserine
Sulfhydrylase Complexed In External Aldimine Linkage
With Methionine
Length = 322
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 57/88 (64%)
Query: 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXX 61
HKIQGIG GF+P LD+ ++D+VV +T+ EAI TA+ L +EG+L GISSG
Sbjct: 224 HKIQGIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKL 283
Query: 62 XXXXENAGKLIVVIFPSSGERYLSSEMF 89
K IVVI PSSGERYLS+ +F
Sbjct: 284 QEDESFTNKNIVVILPSSGERYLSTALF 311
>pdb|1OAS|A Chain A, O-Acetylserine Sulfhydrylase From Salmonella Typhimurium
pdb|1OAS|B Chain B, O-Acetylserine Sulfhydrylase From Salmonella Typhimurium
pdb|1FCJ|A Chain A, Crystal Structure Of Oass Complexed With Chloride And
Sulfate
pdb|1FCJ|B Chain B, Crystal Structure Of Oass Complexed With Chloride And
Sulfate
pdb|1FCJ|C Chain C, Crystal Structure Of Oass Complexed With Chloride And
Sulfate
pdb|1FCJ|D Chain D, Crystal Structure Of Oass Complexed With Chloride And
Sulfate
Length = 322
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 57/88 (64%)
Query: 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXX 61
HKIQGIG GF+P LD+ ++D+VV +T+ EAI TA+ L +EG+L GISSG
Sbjct: 224 HKIQGIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKL 283
Query: 62 XXXXENAGKLIVVIFPSSGERYLSSEMF 89
K IVVI PSSGERYLS+ +F
Sbjct: 284 QEDESFTNKNIVVILPSSGERYLSTALF 311
>pdb|4AIR|A Chain A, Leishmania Major Cysteine Synthase
pdb|4AIR|B Chain B, Leishmania Major Cysteine Synthase
Length = 354
Score = 82.4 bits (202), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 57/101 (56%)
Query: 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXX 61
HKIQGIG GFVP VLD S++DEV V ++AI+TA L +G+ G S G
Sbjct: 247 HKIQGIGPGFVPDVLDRSLIDEVFCVAGDDAIETALKLTRSDGVFCGFSGGANVYAALKI 306
Query: 62 XXXXENAGKLIVVIFPSSGERYLSSEMFDAERQAAENMAYV 102
E GK IV I PS GERYLS+ ++ + R ++ V
Sbjct: 307 AERPEMEGKTIVTIIPSFGERYLSTALYRSVRDEVSSLPVV 347
>pdb|3T4P|A Chain A, Crystal Structure Of O-Acetyl Serine Sulfhydrylase From
Leishmania Donovani In Complex With Designed
Tetrapeptide
pdb|3TBH|A Chain A, Crystal Structure Of O-Acetyl Serine Sulfhydrylase In
Complex With Octapeptide Derived From Serine Acetyl
Transferase Of Leishmania Donovani
pdb|3SPX|A Chain A, Crystal Structure Of O-Acetyl Serine Sulfhydrylase From
Leishmania Donovani
Length = 334
Score = 82.0 bits (201), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 55/93 (59%)
Query: 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXX 61
HKIQGIG GFVP VLD S++DEV+ V ++AI+TA L +G+ G S G
Sbjct: 226 HKIQGIGPGFVPDVLDRSLIDEVLCVAGDDAIETALKLTRSDGVFCGFSGGANVYAALKI 285
Query: 62 XXXXENAGKLIVVIFPSSGERYLSSEMFDAERQ 94
E GK IV + PS GERYLS+ ++ + R
Sbjct: 286 AERPEMEGKTIVTVIPSFGERYLSTTLYRSVRD 318
>pdb|3BM5|A Chain A, Crystal Structure Of O-Acetyl-Serine Sulfhydrylase From
Entamoeba Histolytica In Complex With Cysteine
pdb|3BM5|B Chain B, Crystal Structure Of O-Acetyl-Serine Sulfhydrylase From
Entamoeba Histolytica In Complex With Cysteine
Length = 338
Score = 75.1 bits (183), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%)
Query: 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXX 61
H IQGIG GF+P + +DE++ + + +A + A+ + +G++ G+SSG
Sbjct: 231 HGIQGIGAGFIPDIYKKEFVDEIIPIKTQDAWKMARAVVKYDGIMCGMSSGAAILAGLKE 290
Query: 62 XXXXENAGKLIVVIFPSSGERYLSSEMF 89
EN GK IV+I PS GERYLS++++
Sbjct: 291 AEKPENEGKTIVIIVPSCGERYLSTDLY 318
>pdb|2PQM|A Chain A, Crystal Structure Of Cysteine Synthase (Oass) From
Entamoeba Histolytica At 1.86 A Resolution
pdb|2PQM|B Chain B, Crystal Structure Of Cysteine Synthase (Oass) From
Entamoeba Histolytica At 1.86 A Resolution
Length = 343
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%)
Query: 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXX 61
H IQGIG GF+P + +DE++ + + +A + A+ + +G++ G+SSG
Sbjct: 232 HGIQGIGAGFIPDIYKKEFVDEIIPIKTQDAWKMARAVVKYDGIMCGMSSGAAILAGLKE 291
Query: 62 XXXXENAGKLIVVIFPSSGERYLSSEMF 89
EN GK IV+I PS GERYLS++++
Sbjct: 292 AEKPENEGKTIVIIVPSCGERYLSTDLY 319
>pdb|3FCA|A Chain A, Genetic Incorporation Of A Metal-Ion Chelating Amino Acid
Into Proteins As Biophysical Probe
pdb|3FCA|B Chain B, Genetic Incorporation Of A Metal-Ion Chelating Amino Acid
Into Proteins As Biophysical Probe
Length = 291
Score = 72.0 bits (175), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXX 61
H IQGIG GFVP +LD S++DEV+ V EA + A+ L KEGLLVGISSG
Sbjct: 207 HAIQGIGAGFVPKILDRSVIDEVITVEDEEAYEMARYLAKKEGLLVGISSGANVAAALKV 266
Query: 62 XXXXENAGKLIVVIFPSSGERYLS 85
+ +V + P ERYLS
Sbjct: 267 AQKLGPDAR-VVTVAPDHAERYLS 289
>pdb|1O58|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665)
From Thermotoga Maritima At 1.80 A Resolution
pdb|1O58|B Chain B, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665)
From Thermotoga Maritima At 1.80 A Resolution
pdb|1O58|C Chain C, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665)
From Thermotoga Maritima At 1.80 A Resolution
pdb|1O58|D Chain D, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665)
From Thermotoga Maritima At 1.80 A Resolution
Length = 303
Score = 72.0 bits (175), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXX 61
H IQGIG GFVP +LD S++DEV+ V EA + A+ L KEGLLVGISSG
Sbjct: 219 HAIQGIGAGFVPKILDRSVIDEVITVEDEEAYEMARYLAKKEGLLVGISSGANVAAALKV 278
Query: 62 XXXXENAGKLIVVIFPSSGERYLS 85
+ +V + P ERYLS
Sbjct: 279 AQKLGPDAR-VVTVAPDHAERYLS 301
>pdb|2EGU|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrase From
Geobacillus Kaustophilus Hta426
Length = 308
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXX 61
HKIQGIG GFVP +LD SI D V+ VT+ EA A+ +EG+L GISSG
Sbjct: 218 HKIQGIGAGFVPDILDTSIYDGVITVTTEEAFAAARRAAREEGILGGISSGAAIHAALKV 277
Query: 62 XXXXENAGKLIVVIFPSSGERYLSSEMFDAE 92
GK ++ I PS+GERYLS+ ++ E
Sbjct: 278 AKEL-GKGKKVLAIIPSNGERYLSTPLYQFE 307
>pdb|1VE1|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase
pdb|2ECO|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase Complexed With 4-Methylvalerate
pdb|2ECQ|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase Complexed With 3-Hydroxylactate
pdb|2EFY|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase Complexed With 4-Acetylbutyric Acid
pdb|2EFY|B Chain B, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase Complexed With 4-Acetylbutyric Acid
Length = 304
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 HHKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXX 60
H QG+G GF+P LD+S+LD V++V +A A+ L +EGL +G+SSG
Sbjct: 214 QHGFQGMGPGFIPENLDLSLLDGVIQVWEEDAFPLARRLAREEGLFLGMSSGGIVWAALQ 273
Query: 61 XXXXXENAGKLIVVIFPSSGERYLSSEMF 89
GK + I P G +YLS+ ++
Sbjct: 274 VAREL-GPGKRVACISPDGGWKYLSTPLY 301
>pdb|1JBQ|A Chain A, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|B Chain B, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|C Chain C, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|D Chain D, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|E Chain E, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|F Chain F, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
Length = 435
Score = 55.8 bits (133), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXX 61
++++GIG F+P+VLD +++D+ + EA A++L A+EGLL G S+G
Sbjct: 323 YEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVKA 382
Query: 62 XXXXENAGKLIVVIFPSSGERYLSSEMFD 90
+ G+ VVI P S Y++ + D
Sbjct: 383 AQELQE-GQRCVVILPDSVRNYMTKFLSD 410
>pdb|1M54|A Chain A, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|B Chain B, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|C Chain C, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|D Chain D, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|E Chain E, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|F Chain F, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
Length = 363
Score = 55.5 bits (132), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXX 61
++++GIG F+P+VLD +++D+ + EA A++L A+EGLL G S+G
Sbjct: 258 YEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVKA 317
Query: 62 XXXXENAGKLIVVIFPSSGERYLSSEMFD 90
+ G+ VVI P S Y++ + D
Sbjct: 318 AQELQE-GQRCVVILPDSVRNYMTKFLSD 345
>pdb|2JC3|A Chain A, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|B Chain B, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|C Chain C, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|D Chain D, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|E Chain E, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|F Chain F, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|G Chain G, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|H Chain H, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
Length = 303
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 11 FVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXXXXXXENAGK 70
++P + + S++DEV+ + N+A T + L +EG+ G+SSG G
Sbjct: 216 YMPGIFNASLVDEVLDIHQNDAENTMRELAVREGIFCGVSSGGAVAGALRVARA--TPGA 273
Query: 71 LIVVIFPSSGERYLSSEMFDAE 92
++V I G+RYLS+ +F E
Sbjct: 274 IVVAIICDRGDRYLSTGVFGEE 295
>pdb|2V03|A Chain A, High Resolution Structure And Catalysis Of An O-
Acetylserine Sulfhydrylase
Length = 303
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 11 FVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXXXXXXENAGK 70
++P + + S++DEV+ + +A T + L +EG+ G+SSG +A
Sbjct: 216 YLPGIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAAANPDA-- 273
Query: 71 LIVVIFPSSGERYLSSEMFDAE 92
++V I G+RYLS+ +F E
Sbjct: 274 VVVAIICDRGDRYLSTGVFGEE 295
>pdb|2BHS|A Chain A, Crystal Structure Of Cysteine Synthase B
pdb|2BHS|B Chain B, Crystal Structure Of Cysteine Synthase B
pdb|2BHS|C Chain C, Crystal Structure Of Cysteine Synthase B
pdb|2BHS|D Chain D, Crystal Structure Of Cysteine Synthase B
Length = 303
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 11 FVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXXXXXXENAGK 70
++P + + S++DEV+ + +A T + L +EG+ G+SSG +A
Sbjct: 216 YLPGIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAKANPDA-- 273
Query: 71 LIVVIFPSSGERYLSSEMFDAE 92
++V I G+RYLS+ +F E
Sbjct: 274 VVVAIICDRGDRYLSTGVFGEE 295
>pdb|2BHT|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase B
pdb|2BHT|B Chain B, Crystal Structure Of O-Acetylserine Sulfhydrylase B
pdb|2BHT|C Chain C, Crystal Structure Of O-Acetylserine Sulfhydrylase B
pdb|2BHT|D Chain D, Crystal Structure Of O-Acetylserine Sulfhydrylase B
Length = 303
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 11 FVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXXXXXXENAGK 70
++P + + S++DEV+ + +A T + L +EG+ G+SSG +A
Sbjct: 216 YLPGIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAKANPDA-- 273
Query: 71 LIVVIFPSSGERYLSSEMFDAE 92
++V I G+RYLS+ +F E
Sbjct: 274 VVVAIICDRGDRYLSTGVFGEE 295
>pdb|3DWG|A Chain A, Crystal Structure Of A Sulfur Carrier Protein Complex
Found In The Cysteine Biosynthetic Pathway Of
Mycobacterium Tuberculosis
pdb|3DWG|B Chain B, Crystal Structure Of A Sulfur Carrier Protein Complex
Found In The Cysteine Biosynthetic Pathway Of
Mycobacterium Tuberculosis
Length = 325
Score = 32.0 bits (71), Expect = 0.10, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 10 GFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXXXXXXENAG 69
GFVP + D IL V + +A++ + L EG+ GIS+G AG
Sbjct: 227 GFVPELYDPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAG 286
Query: 70 KL--IVVIFPSSGERYLSSEMFDAERQAAE 97
+ I ++ +G +YLS+ + AE
Sbjct: 287 ERADIALVVADAGWKYLSTGAYAGSLDDAE 316
>pdb|3DWI|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cysm, The
Cysteine Synthase B
pdb|3DWI|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Cysm, The
Cysteine Synthase B
Length = 323
Score = 31.6 bits (70), Expect = 0.11, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 10 GFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXXXXXXENAG 69
GFVP + D IL V + +A++ + L EG+ GIS+G AG
Sbjct: 225 GFVPELYDPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAG 284
Query: 70 KL--IVVIFPSSGERYLSSEMFDAERQAAE 97
+ I ++ +G +YLS+ + AE
Sbjct: 285 ERADIALVVADAGWKYLSTGAYAGSLDDAE 314
>pdb|3DKI|A Chain A, 2.1 A X-Ray Structure Of Cysm (Rv1336) From Mycobacterium
Tuberculosis An O-Phosphoserine Dependent Cysteine
Synthase
pdb|3DKI|B Chain B, 2.1 A X-Ray Structure Of Cysm (Rv1336) From Mycobacterium
Tuberculosis An O-Phosphoserine Dependent Cysteine
Synthase
pdb|3FGP|A Chain A, 2.05 A Crystal Structure Of Cysm From Mycobacterium
Tuberculosis - Open And Closed Conformations
pdb|3FGP|B Chain B, 2.05 A Crystal Structure Of Cysm From Mycobacterium
Tuberculosis - Open And Closed Conformations
Length = 326
Score = 31.6 bits (70), Expect = 0.11, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 10 GFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGXXXXXXXXXXXXXENAG 69
GFVP + D IL V + +A++ + L EG+ GIS+G AG
Sbjct: 228 GFVPELYDPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAG 287
Query: 70 KL--IVVIFPSSGERYLSSEMFDAERQAAE 97
+ I ++ +G +YLS+ + AE
Sbjct: 288 ERADIALVVADAGWKYLSTGAYAGSLDDAE 317
>pdb|3PC2|A Chain A, Full Length Structure Of Cystathionine Beta-Synthase From
Drosophila
pdb|3PC3|A Chain A, Full Length Structure Of Cystathionine Beta-Synthase From
Drosophila In Complex With Aminoacrylate
pdb|3PC4|A Chain A, Full Length Structure Of Cystathionine Beta-Synthase From
Drosophila In Complex With Serine
Length = 527
Score = 29.6 bits (65), Expect = 0.50, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 26/42 (61%)
Query: 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKE 43
++++GIG F P+V D +++D ++ ++ ++ L A+E
Sbjct: 275 YEVEGIGYDFPPTVFDDTVVDVWTKIGDSDCFPMSRRLNAEE 316
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.133 0.353
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,293,826
Number of Sequences: 62578
Number of extensions: 62581
Number of successful extensions: 195
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 156
Number of HSP's gapped (non-prelim): 34
length of query: 106
length of database: 14,973,337
effective HSP length: 71
effective length of query: 35
effective length of database: 10,530,299
effective search space: 368560465
effective search space used: 368560465
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 45 (21.9 bits)