Query 037531
Match_columns 106
No_of_seqs 124 out of 1039
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 22:52:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037531.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037531hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vc3_A Beta-cyanoalnine syntha 99.9 1E-24 3.5E-29 165.8 11.0 102 1-102 240-341 (344)
2 3tbh_A O-acetyl serine sulfhyd 99.8 6E-21 2.1E-25 144.3 9.8 101 1-101 225-325 (334)
3 4aec_A Cysteine synthase, mito 99.8 6E-21 2E-25 149.3 9.6 101 1-101 328-428 (430)
4 2q3b_A Cysteine synthase A; py 99.8 5.4E-20 1.8E-24 137.4 9.2 92 2-93 221-312 (313)
5 1y7l_A O-acetylserine sulfhydr 99.8 8.3E-20 2.8E-24 136.5 9.8 92 1-92 223-314 (316)
6 3pc3_A CG1753, isoform A; CBS, 99.8 5.5E-20 1.9E-24 145.8 8.5 96 2-99 275-370 (527)
7 1z7w_A Cysteine synthase; tran 99.8 2.2E-19 7.5E-24 134.6 11.2 99 2-100 221-319 (322)
8 1jbq_A B, cystathionine beta-s 99.8 1.1E-19 3.8E-24 142.1 10.0 97 2-100 323-419 (435)
9 3dwg_A Cysteine synthase B; su 99.8 1E-19 3.5E-24 137.0 5.9 91 2-92 219-311 (325)
10 2pqm_A Cysteine synthase; OASS 99.8 3.2E-19 1.1E-23 135.2 7.8 99 2-101 232-330 (343)
11 2v03_A Cysteine synthase B; py 99.8 5.1E-19 1.8E-23 131.8 7.9 92 4-98 209-300 (303)
12 1ve1_A O-acetylserine sulfhydr 99.8 1.5E-18 5.2E-23 129.0 9.9 89 2-91 215-303 (304)
13 2egu_A Cysteine synthase; O-ac 99.8 2.1E-18 7.2E-23 128.5 8.9 87 2-89 218-304 (308)
14 1o58_A O-acetylserine sulfhydr 99.7 2.7E-17 9.1E-22 122.5 9.7 84 2-86 219-302 (303)
15 3aey_A Threonine synthase; PLP 99.5 6E-14 2E-18 106.2 7.5 82 4-86 238-326 (351)
16 2d1f_A Threonine synthase; ami 99.5 1.2E-13 4E-18 105.1 7.9 82 4-86 247-335 (360)
17 2zsj_A Threonine synthase; PLP 99.5 1.1E-13 3.7E-18 104.8 7.6 82 4-86 240-328 (352)
18 1wkv_A Cysteine synthase; homo 99.4 1.2E-13 4.1E-18 106.6 6.9 74 13-86 303-377 (389)
19 1v8z_A Tryptophan synthase bet 99.4 6.3E-13 2.2E-17 101.4 6.0 69 17-86 312-380 (388)
20 1qop_B Tryptophan synthase bet 99.3 7E-13 2.4E-17 101.8 4.7 72 15-86 314-385 (396)
21 2o2e_A Tryptophan synthase bet 99.3 2.5E-12 8.6E-17 99.9 7.6 71 15-86 341-411 (422)
22 3l6b_A Serine racemase; pyrido 99.3 5.5E-12 1.9E-16 95.6 6.9 69 17-86 252-321 (346)
23 2gn0_A Threonine dehydratase c 99.3 1.8E-12 6.2E-17 97.9 4.2 81 3-86 247-332 (342)
24 4d9b_A D-cysteine desulfhydras 99.3 3.2E-12 1.1E-16 96.6 5.2 75 5-79 254-331 (342)
25 1v71_A Serine racemase, hypoth 99.3 6.9E-12 2.4E-16 93.8 6.8 76 3-80 233-311 (323)
26 1j0a_A 1-aminocyclopropane-1-c 99.3 5E-12 1.7E-16 94.6 5.6 74 5-80 236-311 (325)
27 1x1q_A Tryptophan synthase bet 99.3 4.1E-12 1.4E-16 98.4 5.0 68 18-86 342-409 (418)
28 1ve5_A Threonine deaminase; ri 99.2 9.9E-12 3.4E-16 92.3 6.7 63 16-81 245-307 (311)
29 1p5j_A L-serine dehydratase; l 99.2 2.2E-11 7.5E-16 93.2 8.6 87 5-93 257-353 (372)
30 2rkb_A Serine dehydratase-like 99.2 2.2E-11 7.5E-16 90.8 7.9 83 4-86 216-308 (318)
31 1vb3_A Threonine synthase; PLP 99.2 5.6E-12 1.9E-16 98.1 4.4 61 21-86 325-385 (428)
32 1e5x_A Threonine synthase; thr 99.2 7.2E-12 2.5E-16 99.0 5.0 81 4-86 354-441 (486)
33 1tzj_A ACC deaminase, 1-aminoc 99.2 1.4E-11 4.7E-16 92.4 5.5 71 15-86 258-330 (338)
34 4d9i_A Diaminopropionate ammon 99.2 3E-11 1E-15 92.9 6.2 81 5-86 283-384 (398)
35 3iau_A Threonine deaminase; py 99.2 5.4E-11 1.8E-15 90.6 7.4 78 5-82 269-349 (366)
36 1tdj_A Biosynthetic threonine 99.2 9.1E-11 3.1E-15 93.5 8.7 69 15-83 253-321 (514)
37 3ss7_X D-serine dehydratase; t 99.1 3.3E-11 1.1E-15 94.1 5.1 69 18-86 354-433 (442)
38 1f2d_A 1-aminocyclopropane-1-c 99.1 4.2E-11 1.4E-15 90.1 5.3 77 5-81 247-327 (341)
39 4h27_A L-serine dehydratase/L- 99.0 2.4E-09 8.3E-14 81.5 9.2 82 5-86 257-348 (364)
40 1kl7_A Threonine synthase; thr 98.9 1.4E-09 4.9E-14 86.6 6.4 64 23-86 391-458 (514)
41 4f4f_A Threonine synthase; str 98.4 3.8E-07 1.3E-11 72.0 6.3 59 24-86 365-423 (468)
42 3v7n_A Threonine synthase; ssg 98.2 4.4E-07 1.5E-11 71.9 2.5 60 23-86 383-442 (487)
43 2oq2_A Phosphoadenosine phosph 76.7 4.5 0.00015 28.7 5.1 69 31-99 29-98 (261)
44 1zun_A Sulfate adenylyltransfe 75.1 4.3 0.00015 30.0 4.7 73 29-101 32-106 (325)
45 1mvl_A PPC decarboxylase athal 74.1 0.95 3.3E-05 31.8 0.9 57 28-86 6-62 (209)
46 2nrk_A Hypothetical protein GR 69.0 0.96 3.3E-05 30.8 -0.1 47 3-49 36-82 (173)
47 1sur_A PAPS reductase; assimil 63.6 5.2 0.00018 27.2 2.8 68 31-101 31-100 (215)
48 2o8v_A Phosphoadenosine phosph 62.0 8.5 0.00029 27.1 3.8 68 31-101 32-101 (252)
49 3qjg_A Epidermin biosynthesis 62.0 4.1 0.00014 27.7 2.1 44 43-86 6-49 (175)
50 2goy_A Adenosine phosphosulfat 55.3 10 0.00036 27.0 3.4 67 31-101 41-109 (275)
51 1g63_A Epidermin modifying enz 52.8 6 0.0002 27.0 1.6 44 44-87 4-47 (181)
52 2qru_A Uncharacterized protein 51.8 21 0.00072 24.4 4.4 33 29-61 78-115 (274)
53 2ywb_A GMP synthase [glutamine 47.9 48 0.0017 25.7 6.3 50 30-82 197-246 (503)
54 2xvc_A ESCRT-III, SSO0910; cel 46.0 2.8 9.7E-05 23.8 -0.7 31 15-46 25-55 (59)
55 3lqk_A Dipicolinate synthase s 44.9 6.8 0.00023 27.2 0.9 44 43-86 8-52 (201)
56 4ggo_A Trans-2-enoyl-COA reduc 44.5 36 0.0012 26.2 5.0 32 45-79 54-85 (401)
57 1qzu_A Hypothetical protein MD 44.0 11 0.00038 26.1 1.9 45 42-86 19-64 (206)
58 1ujs_A Actin-binding LIM prote 36.8 9.9 0.00034 23.2 0.6 17 36-52 72-88 (88)
59 2dpl_A GMP synthetase, GMP syn 34.6 34 0.0012 24.7 3.4 51 30-82 8-58 (308)
60 2wsi_A FAD synthetase; transfe 34.5 66 0.0023 23.2 4.9 58 44-101 55-131 (306)
61 3tqi_A GMP synthase [glutamine 31.7 98 0.0034 24.1 5.8 54 30-85 218-271 (527)
62 1p3y_1 MRSD protein; flavoprot 31.1 6.6 0.00022 27.1 -1.0 45 42-86 8-52 (194)
63 4f06_A Extracellular ligand-bi 30.7 55 0.0019 23.4 3.9 36 29-64 57-94 (371)
64 3u1t_A DMMA haloalkane dehalog 29.7 1.2E+02 0.004 19.8 7.0 36 28-65 78-117 (309)
65 3ibs_A Conserved hypothetical 28.9 46 0.0016 21.8 3.0 35 49-83 88-125 (218)
66 3lyu_A Putative hydrogenase; t 28.8 96 0.0033 19.4 4.5 42 45-93 23-64 (142)
67 3zqu_A Probable aromatic acid 28.3 7.4 0.00025 27.2 -1.1 43 43-85 5-47 (209)
68 3hpw_C Protein CCDA; alpha+bet 28.0 47 0.0016 16.7 2.3 19 29-47 12-30 (36)
69 1sbz_A Probable aromatic acid 27.9 7.6 0.00026 26.9 -1.1 42 45-86 3-45 (197)
70 3mcu_A Dipicolinate synthase, 27.1 24 0.00082 24.5 1.4 42 43-84 6-48 (207)
71 3ged_A Short-chain dehydrogena 26.0 59 0.002 22.8 3.3 21 44-64 5-25 (247)
72 3u5t_A 3-oxoacyl-[acyl-carrier 26.0 74 0.0025 21.9 3.8 23 42-64 28-50 (267)
73 4fgs_A Probable dehydrogenase 25.9 62 0.0021 23.1 3.4 32 39-74 27-58 (273)
74 2ejb_A Probable aromatic acid 25.8 13 0.00045 25.3 -0.2 43 44-86 3-45 (189)
75 4h15_A Short chain alcohol deh 25.7 58 0.002 22.8 3.2 28 45-76 15-42 (261)
76 3nyw_A Putative oxidoreductase 25.6 68 0.0023 21.8 3.5 21 44-64 10-30 (250)
77 2vxo_A GMP synthase [glutamine 25.0 1.3E+02 0.0046 24.5 5.6 50 31-82 229-279 (697)
78 3l6e_A Oxidoreductase, short-c 24.6 67 0.0023 21.6 3.3 21 44-64 6-26 (235)
79 3icc_A Putative 3-oxoacyl-(acy 24.3 63 0.0022 21.6 3.1 21 44-64 10-30 (255)
80 4gnr_A ABC transporter substra 24.2 1.2E+02 0.004 21.1 4.7 37 28-64 59-97 (353)
81 3h7a_A Short chain dehydrogena 24.1 74 0.0025 21.6 3.5 21 44-64 10-30 (252)
82 4e6p_A Probable sorbitol dehyd 24.0 23 0.00077 24.3 0.7 30 42-75 9-38 (259)
83 3i09_A Periplasmic branched-ch 23.8 1.8E+02 0.0063 20.3 5.7 37 28-64 55-93 (375)
84 4hqf_A Thrombospondin-related 23.8 1.8E+02 0.0062 20.0 6.7 54 29-82 86-141 (281)
85 1shu_X Anthrax toxin receptor 23.7 1.4E+02 0.0048 18.6 5.6 32 51-82 84-116 (182)
86 3o26_A Salutaridine reductase; 23.7 80 0.0027 21.6 3.6 21 44-64 15-35 (311)
87 3t7c_A Carveol dehydrogenase; 23.4 70 0.0024 22.4 3.3 21 44-64 31-51 (299)
88 4gkb_A 3-oxoacyl-[acyl-carrier 23.3 68 0.0023 22.5 3.2 21 44-64 10-30 (258)
89 3guy_A Short-chain dehydrogena 23.3 64 0.0022 21.4 3.0 21 44-64 4-24 (230)
90 3oos_A Alpha/beta hydrolase fa 23.3 1.5E+02 0.0051 18.8 7.0 50 28-79 73-126 (278)
91 4b79_A PA4098, probable short- 23.2 69 0.0024 22.4 3.2 28 44-75 14-41 (242)
92 1cxq_A Avian sarcoma virus int 23.1 1.1E+02 0.0038 19.0 4.0 25 74-100 70-94 (162)
93 4hqo_A Sporozoite surface prot 23.1 1.9E+02 0.0064 19.8 7.3 35 48-82 102-138 (266)
94 3pxx_A Carveol dehydrogenase; 23.0 71 0.0024 21.8 3.2 22 43-64 12-33 (287)
95 4f11_A Gamma-aminobutyric acid 22.9 1.8E+02 0.006 21.0 5.5 39 27-65 67-108 (433)
96 4dnp_A DAD2; alpha/beta hydrol 22.8 1.5E+02 0.0052 18.7 5.8 34 30-65 74-111 (269)
97 3tl3_A Short-chain type dehydr 22.6 81 0.0028 21.3 3.4 26 39-64 7-32 (257)
98 3tsc_A Putative oxidoreductase 22.6 76 0.0026 21.8 3.3 23 42-64 12-34 (277)
99 2qvb_A Haloalkane dehalogenase 22.4 1.6E+02 0.0056 19.0 5.7 48 28-77 80-132 (297)
100 3v2h_A D-beta-hydroxybutyrate 22.4 26 0.0009 24.5 0.8 27 38-64 22-48 (281)
101 3f1l_A Uncharacterized oxidore 22.3 79 0.0027 21.4 3.3 21 44-64 15-35 (252)
102 3s2u_A UDP-N-acetylglucosamine 22.1 89 0.0031 22.5 3.7 34 46-80 8-41 (365)
103 3n0w_A ABC branched chain amin 22.1 2.1E+02 0.0072 20.1 6.3 37 28-64 57-95 (379)
104 3tpc_A Short chain alcohol deh 22.0 80 0.0027 21.3 3.3 29 43-75 9-37 (257)
105 3uve_A Carveol dehydrogenase ( 22.0 79 0.0027 21.8 3.3 30 42-75 12-41 (286)
106 3pe6_A Monoglyceride lipase; a 22.0 1.7E+02 0.0057 18.9 6.1 45 30-76 98-146 (303)
107 2vsh_A TARI, 2-C-methyl-D-eryt 21.8 1.7E+02 0.006 19.0 6.0 63 20-82 46-119 (236)
108 3ppi_A 3-hydroxyacyl-COA dehyd 21.8 77 0.0026 21.7 3.2 24 41-64 30-53 (281)
109 4fn4_A Short chain dehydrogena 21.7 77 0.0026 22.3 3.2 20 45-64 11-30 (254)
110 3s8m_A Enoyl-ACP reductase; ro 21.6 1.1E+02 0.0038 23.5 4.2 30 45-78 65-95 (422)
111 3tfo_A Putative 3-oxoacyl-(acy 21.6 72 0.0025 22.1 3.0 20 45-64 8-27 (264)
112 3edm_A Short chain dehydrogena 21.6 79 0.0027 21.5 3.2 29 43-75 10-38 (259)
113 3v8b_A Putative dehydrogenase, 21.5 86 0.0029 21.8 3.4 23 42-64 29-51 (283)
114 3p9x_A Phosphoribosylglycinami 21.4 99 0.0034 21.3 3.7 37 44-82 6-42 (211)
115 3rku_A Oxidoreductase YMR226C; 21.4 1.1E+02 0.0037 21.3 4.0 30 36-65 28-57 (287)
116 3lf2_A Short chain oxidoreduct 21.4 84 0.0029 21.4 3.3 20 45-64 12-31 (265)
117 3fak_A Esterase/lipase, ESTE5; 21.2 1.3E+02 0.0044 20.9 4.4 31 30-61 132-168 (322)
118 3zv4_A CIS-2,3-dihydrobiphenyl 21.1 85 0.0029 21.7 3.3 21 44-64 8-28 (281)
119 3pgx_A Carveol dehydrogenase; 21.1 85 0.0029 21.6 3.3 23 42-64 16-38 (280)
120 3l77_A Short-chain alcohol deh 21.1 1.1E+02 0.0039 20.1 3.9 20 45-64 6-25 (235)
121 3n0x_A Possible substrate bind 21.0 1.7E+02 0.0058 20.6 5.0 38 28-65 57-96 (374)
122 3lrx_A Putative hydrogenase; a 20.9 1.5E+02 0.0053 18.7 4.4 43 44-93 27-69 (158)
123 3sju_A Keto reductase; short-c 20.9 85 0.0029 21.7 3.3 23 42-64 25-47 (279)
124 3dii_A Short-chain dehydrogena 20.9 88 0.003 21.1 3.3 27 45-75 6-32 (247)
125 2xgg_A Microneme protein 2; A/ 20.8 1.6E+02 0.0054 18.6 4.4 14 69-82 122-135 (178)
126 3sx2_A Putative 3-ketoacyl-(ac 20.8 87 0.003 21.4 3.3 22 43-64 15-36 (278)
127 3s55_A Putative short-chain de 20.8 83 0.0028 21.6 3.2 23 42-64 11-33 (281)
128 3rd5_A Mypaa.01249.C; ssgcid, 20.8 93 0.0032 21.5 3.5 22 43-64 18-39 (291)
129 2jah_A Clavulanic acid dehydro 20.7 94 0.0032 20.9 3.4 21 44-64 10-30 (247)
130 3fq8_A Glutamate-1-semialdehyd 20.6 2.3E+02 0.0078 20.4 5.7 48 28-76 90-141 (427)
131 3gaf_A 7-alpha-hydroxysteroid 20.6 95 0.0033 21.1 3.5 20 45-64 16-35 (256)
132 3i1j_A Oxidoreductase, short c 20.6 80 0.0027 21.0 3.0 21 44-64 17-37 (247)
133 3uf0_A Short-chain dehydrogena 20.6 84 0.0029 21.7 3.2 21 44-64 34-54 (273)
134 3n74_A 3-ketoacyl-(acyl-carrie 20.5 86 0.0029 21.1 3.2 21 44-64 12-32 (261)
135 4eso_A Putative oxidoreductase 20.5 90 0.0031 21.2 3.3 23 42-64 9-31 (255)
136 3qit_A CURM TE, polyketide syn 20.4 1.7E+02 0.006 18.5 5.5 35 29-65 78-116 (286)
137 3oec_A Carveol dehydrogenase ( 20.3 82 0.0028 22.3 3.2 34 38-75 43-76 (317)
138 4hp8_A 2-deoxy-D-gluconate 3-d 20.3 73 0.0025 22.4 2.8 27 45-75 13-39 (247)
139 3rwb_A TPLDH, pyridoxal 4-dehy 20.2 88 0.003 21.1 3.2 22 43-64 8-29 (247)
140 4f6o_A Metacaspase-1; rossmann 20.2 1.9E+02 0.0065 21.6 5.2 57 28-84 73-143 (350)
141 3tzq_B Short-chain type dehydr 20.2 87 0.003 21.5 3.2 30 42-75 12-41 (271)
142 3orf_A Dihydropteridine reduct 20.0 90 0.0031 21.1 3.2 30 43-76 24-53 (251)
No 1
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=99.92 E-value=1e-24 Score=165.78 Aligned_cols=102 Identities=52% Similarity=0.846 Sum_probs=93.7
Q ss_pred CCCcccCCCCCCCcCcccCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCC
Q 037531 1 HHKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSG 80 (106)
Q Consensus 1 ~~~i~GiG~~~~p~~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g 80 (106)
+|.++|+|.++.|.+++.+++|+++.|+|+|++++++.|+++||+++|+|||+++++|+++++....++++||+|+||+|
T Consensus 240 ~~~i~g~g~~~~~~~~~~~~~d~~v~v~d~eai~a~~~L~~~eGi~v~~ssga~~~aAl~~a~~~~~~g~~VV~il~d~G 319 (344)
T 3vc3_A 240 PHHITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISSGANTVAALRLAQLPENKGKLIVTVHPSFG 319 (344)
T ss_dssp CCSCTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHTSGGGTTCEEEEEECBBG
T ss_pred CeeEecccccccCcccchhhceEEEEECHHHHHHHHHHHHHHCCCEEehhHHHHHHHHHHHhccccCCCCEEEEEECCCc
Confidence 47789999999999999999999999999999999999999999999999999999999998754346899999999999
Q ss_pred ccccChhhcHHHHHHHhcCccc
Q 037531 81 ERYLSSEMFDAERQAAENMAYV 102 (106)
Q Consensus 81 ~kY~s~~~~~~~~~~~~~~~~~ 102 (106)
+||+||.+|++|+...+.+.+.
T Consensus 320 ~rYlst~~~~~~~~e~~~~~p~ 341 (344)
T 3vc3_A 320 ERYLSSVLFQELRQEAENMQPV 341 (344)
T ss_dssp GGGTTSTTTHHHHHHHHTCCCB
T ss_pred hhhccchhhHHHHHHhccCCCC
Confidence 9999999999999888777543
No 2
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=99.84 E-value=6e-21 Score=144.34 Aligned_cols=101 Identities=49% Similarity=0.765 Sum_probs=87.3
Q ss_pred CCCcccCCCCCCCcCcccCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCC
Q 037531 1 HHKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSG 80 (106)
Q Consensus 1 ~~~i~GiG~~~~p~~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g 80 (106)
++.++|||.+++|.+++.+.+|+++.|+|+|++++++.|++++|+++|||||++++++++++++...++++||+|+||+|
T Consensus 225 ~~~~~gi~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~egi~~epssgaa~aa~~~~~~~~~~~g~~Vv~v~t~~g 304 (334)
T 3tbh_A 225 PHKIQGIGPGFVPDVLDRSLIDEVLCVAGDDAIETALKLTRSDGVFCGFSGGANVYAALKIAERPEMEGKTIVTVIPSFG 304 (334)
T ss_dssp CCSCTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHSGGGTTCEEEEEECBBG
T ss_pred CeecCCCCCCcCCHHHHHHhCCEEEEECHHHHHHHHHHHHHHcCeEEcHHHHHHHHHHHHHHHhccCCcCeEEEEECCCC
Confidence 35688999999999999999999999999999999999999999999999999999999998763236889999999999
Q ss_pred ccccChhhcHHHHHHHhcCcc
Q 037531 81 ERYLSSEMFDAERQAAENMAY 101 (106)
Q Consensus 81 ~kY~s~~~~~~~~~~~~~~~~ 101 (106)
.||+|+.+|++.|...+.+..
T Consensus 305 ~ky~~~~~~~~~~~~~~~~~~ 325 (334)
T 3tbh_A 305 ERYLSTTLYRSVRDEVSSLPV 325 (334)
T ss_dssp GGGTTSGGGTHHHHC------
T ss_pred ccccCchhhhhhHHHhhhcch
Confidence 999999999987777666554
No 3
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=99.84 E-value=6e-21 Score=149.30 Aligned_cols=101 Identities=65% Similarity=0.958 Sum_probs=88.1
Q ss_pred CCCcccCCCCCCCcCcccCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCC
Q 037531 1 HHKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSG 80 (106)
Q Consensus 1 ~~~i~GiG~~~~p~~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g 80 (106)
++.++|||.+++|.+++.+.+|+++.|+|+|++++++.|+++||+++|||||++++++++++++...++++||+|+||+|
T Consensus 328 ~~~i~Gl~~~~~p~~l~~~~vd~~v~Vsd~ea~~a~r~La~~eGi~vepssGaa~aAal~la~~~~~~g~~VV~Il~d~G 407 (430)
T 4aec_A 328 PHKIQGIGAGFIPKNLDQKIMDEVIAISSEEAIETAKQLALKEGLMVGISSGAAAAAAIKVAKRPENAGKLIAVVFPSFG 407 (430)
T ss_dssp CCSCTTSCCSSCCTTCCTTTCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHTTSGGGTTCEEEEEECBBG
T ss_pred ceeehhccCCCCcHHHHHHhCCeEEEECHHHHHHHHHHHHHHCCCEEehHHHHHHHHHHHHHHhcCCCcCeEEEEECCCC
Confidence 36789999999999999999999999999999999999999999999999999999999998764336889999999999
Q ss_pred ccccChhhcHHHHHHHhcCcc
Q 037531 81 ERYLSSEMFDAERQAAENMAY 101 (106)
Q Consensus 81 ~kY~s~~~~~~~~~~~~~~~~ 101 (106)
+||+|+.+|+++....+.+.+
T Consensus 408 ~rylst~~~~~~~~~~~~~~~ 428 (430)
T 4aec_A 408 ERYLSTPLFQSIREEVEKMQP 428 (430)
T ss_dssp GGGTTSHHHHHHHHHC-----
T ss_pred ccccchhhhhhhhhhhhcCcc
Confidence 999999999987776666654
No 4
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=99.81 E-value=5.4e-20 Score=137.38 Aligned_cols=92 Identities=57% Similarity=0.929 Sum_probs=76.4
Q ss_pred CCcccCCCCCCCcCcccCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCc
Q 037531 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGE 81 (106)
Q Consensus 2 ~~i~GiG~~~~p~~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~ 81 (106)
+.++|++.+++|.+++...+|+++.|+|+|++++++.|++++|+++|||||++++++++++++...++++||+++||+|.
T Consensus 221 ~~~~g~~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~~~~~vv~v~~~~g~ 300 (313)
T 2q3b_A 221 HPIQGIGAGFVPPVLDQDLVDEIITVGNEDALNVARRLAREEGLLVGISSGAATVAALQVARRPENAGKLIVVVLPDFGE 300 (313)
T ss_dssp CCCTTSCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHTCGGGTTCEEEEEECBBSG
T ss_pred cccCCcCCCCCChhhhHhhccEEEEECHHHHHHHHHHHHHHcCceEchHHHHHHHHHHHHHHhcCCCCCEEEEEECCCCc
Confidence 56789999889999999999999999999999999999999999999999999999999887542257899999999999
Q ss_pred cccChhhcHHHH
Q 037531 82 RYLSSEMFDAER 93 (106)
Q Consensus 82 kY~s~~~~~~~~ 93 (106)
||+++.+|++|+
T Consensus 301 ky~~~~~~~~~~ 312 (313)
T 2q3b_A 301 RYLSTPLFADVA 312 (313)
T ss_dssp GGC---------
T ss_pred ccccchhhhhhh
Confidence 999997777653
No 5
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=99.81 E-value=8.3e-20 Score=136.50 Aligned_cols=92 Identities=59% Similarity=0.833 Sum_probs=81.5
Q ss_pred CCCcccCCCCCCCcCcccCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCC
Q 037531 1 HHKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSG 80 (106)
Q Consensus 1 ~~~i~GiG~~~~p~~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g 80 (106)
++.++||+.+++|.+++.+.+|+++.|+|+|++++++.|++++|+++|||||++++++++++++...++++||+++||+|
T Consensus 223 ~~~~~gi~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~~laa~~~~~~~~~~~~~~vv~i~tg~g 302 (316)
T 1y7l_A 223 PHKIQGIGAGFIPKNLDLSIIDRVETVDSDTALATARRLMAEEGILAGISSGAAVAAADRLAKLPEFADKLIVVILPSAS 302 (316)
T ss_dssp CCSCTTSCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHTSGGGTTCEEEEEECBBC
T ss_pred CcccCcCCCCCCCchhhHhhCCEEEEECHHHHHHHHHHHHHhhCCeEcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCCC
Confidence 35688999999999999999999999999999999999999999999999999999999988764225789999999999
Q ss_pred ccccChhhcHHH
Q 037531 81 ERYLSSEMFDAE 92 (106)
Q Consensus 81 ~kY~s~~~~~~~ 92 (106)
.||+++.+|++|
T Consensus 303 ~k~~~~~~~~~~ 314 (316)
T 1y7l_A 303 ERYLSTALFEGI 314 (316)
T ss_dssp SSCCCTTTC---
T ss_pred cccCCccccccc
Confidence 999999888765
No 6
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.81 E-value=5.5e-20 Score=145.81 Aligned_cols=96 Identities=32% Similarity=0.534 Sum_probs=86.0
Q ss_pred CCcccCCCCCCCcCcccCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCc
Q 037531 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGE 81 (106)
Q Consensus 2 ~~i~GiG~~~~p~~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~ 81 (106)
+.++|||.+++|.+++.+.+|+++.|+|+|++++++.|+++||+++|||||++++++++++++.. ++++||+|+||+|+
T Consensus 275 ~~~~gi~~~~~p~~~~~~~~d~~~~V~d~e~~~a~r~l~~~eGi~~~pssa~alaaal~~~~~~~-~~~~vv~i~~d~g~ 353 (527)
T 3pc3_A 275 YEVEGIGYDFPPTVFDDTVVDVWTKIGDSDCFPMSRRLNAEEGLLCGGSSGGAMHAALEHARKLK-KGQRCVVILPDGIR 353 (527)
T ss_dssp CSCCSCCCSSCCTTCCGGGCCEEEEECGGGTHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHTTCC-TTCEEEEEECBBGG
T ss_pred eeccccCCCCCCcccchhhCcEEEEECHHHHHHHHHHHHHHcCceEcHHHHHHHHHHHHHHHHcC-CCCeEEEEEcCcch
Confidence 56889999999999999999999999999999999999999999999999999999999987753 68899999999999
Q ss_pred cccChhhcHHHHHHHhcC
Q 037531 82 RYLSSEMFDAERQAAENM 99 (106)
Q Consensus 82 kY~s~~~~~~~~~~~~~~ 99 (106)
||+++.++++ |+..+++
T Consensus 354 ryls~~~~~~-~l~~rg~ 370 (527)
T 3pc3_A 354 NYMTKFVSDN-WMEARNF 370 (527)
T ss_dssp GGTTTTTSHH-HHHHTTS
T ss_pred hhHhhhhcHH-HHHhcCC
Confidence 9999966655 4455443
No 7
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=99.81 E-value=2.2e-19 Score=134.64 Aligned_cols=99 Identities=70% Similarity=1.034 Sum_probs=88.6
Q ss_pred CCcccCCCCCCCcCcccCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCc
Q 037531 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGE 81 (106)
Q Consensus 2 ~~i~GiG~~~~p~~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~ 81 (106)
+.++||+.+.+|..++...+|+++.|+|+|++++++.|++++|+++|||||++++++++++++...++++||+++||+|.
T Consensus 221 ~~~~gl~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~~gi~~~pssga~~aaa~~~~~~~~~~~~~vv~i~tg~g~ 300 (322)
T 1z7w_A 221 HKIQGIGAGFIPSVLNVDLIDEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKLAQRPENAGKLFVAIFPSFGE 300 (322)
T ss_dssp CSCTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHTSGGGTTCEEEEEECBBGG
T ss_pred cccCcCcCCCCChhhhHHhCCEEEEECHHHHHHHHHHHHHHcCceEchhHHHHHHHHHHHHHhcCCCCCeEEEEECCCCc
Confidence 46789998889999999999999999999999999999999999999999999999999876542357899999999999
Q ss_pred cccChhhcHHHHHHHhcCc
Q 037531 82 RYLSSEMFDAERQAAENMA 100 (106)
Q Consensus 82 kY~s~~~~~~~~~~~~~~~ 100 (106)
||+++.+|++|+...+.+.
T Consensus 301 k~~~~~~~~~~~~~~~~~~ 319 (322)
T 1z7w_A 301 RYLSTVLFDATRKEAEAMT 319 (322)
T ss_dssp GGTTSGGGHHHHHHHHTCC
T ss_pred ccccchhhhHHHHhccccc
Confidence 9999988888887766663
No 8
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=99.81 E-value=1.1e-19 Score=142.15 Aligned_cols=97 Identities=34% Similarity=0.558 Sum_probs=85.9
Q ss_pred CCcccCCCCCCCcCcccCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCc
Q 037531 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGE 81 (106)
Q Consensus 2 ~~i~GiG~~~~p~~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~ 81 (106)
+.++|||.+++|.+++..++|+++.|+|+|++++++.|++++||++|+|||++++++++++++.. ++++||+|+||+|.
T Consensus 323 ~~~~gig~~~~~~~l~~~~vd~~~~Vsd~ea~~a~r~La~~eGilve~ssgaalaaa~~~~~~~~-~g~~VV~iltd~g~ 401 (435)
T 1jbq_A 323 YEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVKAAQELQ-EGQRCVVILPDSVR 401 (435)
T ss_dssp CSCCSCCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHHHSCCCBCHHHHHHHHHHHHHGGGCC-TTCEEEEEECBBGG
T ss_pred eeecccccCccchhhhhhhccceEEeCHHHHHHHHHHHHHHcCCEEcHHHHHHHHHHHHHHHHcC-CCCeEEEEEcCCcc
Confidence 45789999999999999999999999999999999999999999999999999999999987753 57899999999999
Q ss_pred cccChhhcHHHHHHHhcCc
Q 037531 82 RYLSSEMFDAERQAAENMA 100 (106)
Q Consensus 82 kY~s~~~~~~~~~~~~~~~ 100 (106)
||++++++++ |+.++++.
T Consensus 402 ky~~~~~~~~-w~~~~~~~ 419 (435)
T 1jbq_A 402 NYMTKFLSDR-WMLQKGFL 419 (435)
T ss_dssp GGTTTTTCHH-HHHHTTCC
T ss_pred cccchhhccH-HHHhcCCC
Confidence 9999966655 55566654
No 9
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=99.78 E-value=1e-19 Score=137.02 Aligned_cols=91 Identities=30% Similarity=0.498 Sum_probs=81.0
Q ss_pred CCcccCCCCCCCcCcccCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCE--EEEEeCCC
Q 037531 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKL--IVVIFPSS 79 (106)
Q Consensus 2 ~~i~GiG~~~~p~~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~--Vv~i~~D~ 79 (106)
+.+++++.+++|.+++++.+|+++.|+|+|++++++.|++++|+++|||||++++++++++++...++++ ||+|+||+
T Consensus 219 ~~~~~i~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~egi~~epssa~a~aa~~~~~~~~~~~g~~~~Vv~i~~g~ 298 (325)
T 3dwg_A 219 YALRNMDEGFVPELYDPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIALVVADA 298 (325)
T ss_dssp GCCSSGGGCCCCTTCCGGGCSEEEEEEHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECBB
T ss_pred hccCcccCCcCcccccHhhCCeEEEECHHHHHHHHHHHHHHcCceechhHHHHHHHHHHHHHHhccCCCCCeEEEEECCC
Confidence 3578899999999999999999999999999999999999999999999999999999998764223556 99999999
Q ss_pred CccccChhhcHHH
Q 037531 80 GERYLSSEMFDAE 92 (106)
Q Consensus 80 g~kY~s~~~~~~~ 92 (106)
|.||+|+.+|++.
T Consensus 299 g~ky~~~~~~~~~ 311 (325)
T 3dwg_A 299 GWKYLSTGAYAGS 311 (325)
T ss_dssp GGGGGGGTTTSSC
T ss_pred CccccCchhhcCC
Confidence 9999999667653
No 10
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=99.78 E-value=3.2e-19 Score=135.19 Aligned_cols=99 Identities=38% Similarity=0.737 Sum_probs=86.6
Q ss_pred CCcccCCCCCCCcCcccCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCc
Q 037531 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGE 81 (106)
Q Consensus 2 ~~i~GiG~~~~p~~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~ 81 (106)
+.++|++.+++|.+++...+|+++.|+|+|++++++.|++++|+++|||||++++++++++++...++++||+|+||+|.
T Consensus 232 ~~~~gl~~~~~~~~~~~~~~d~~~~Vsd~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~~~~~vv~i~tg~g~ 311 (343)
T 2pqm_A 232 HGIQGIGAGFIPDIYKKEFVDEIIPIKTQDAWKMARAVVKYDGIMCGMSSGAAILAGLKEAEKPENEGKTIVIIVPSCGE 311 (343)
T ss_dssp CCCTTCCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHTSGGGTTCEEEEEECBBGG
T ss_pred eecCccCCCCCCHHHHHHhCCeEEEECHHHHHHHHHHHHHHhCCeEchhHHHHHHHHHHHHHhcCCCCCeEEEEEcCCCc
Confidence 56889999999999999999999999999999999999999999999999999999999887642357899999999999
Q ss_pred cccChhhcHHHHHHHhcCcc
Q 037531 82 RYLSSEMFDAERQAAENMAY 101 (106)
Q Consensus 82 kY~s~~~~~~~~~~~~~~~~ 101 (106)
||+++.+|++ |+..+++++
T Consensus 312 ky~~~~~~~~-~~~~~~~~~ 330 (343)
T 2pqm_A 312 RYLSTDLYKI-KDEGTKIQI 330 (343)
T ss_dssp GGTTSSTTTS-CCCSCHHHH
T ss_pred cccchhhhhh-HhhcCCCcc
Confidence 9999977765 445555543
No 11
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=99.77 E-value=5.1e-19 Score=131.77 Aligned_cols=92 Identities=30% Similarity=0.595 Sum_probs=80.2
Q ss_pred cccCCCCCCCcCcccCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCccc
Q 037531 4 IQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERY 83 (106)
Q Consensus 4 i~GiG~~~~p~~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY 83 (106)
++|++.+.+|.+++...+|+++.|+|+|++++++.|++++|+++|||||++++++++++++. ++++||+|+||+|.||
T Consensus 209 ~~gl~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~~pssa~alaa~~~~~~~~--~~~~vv~i~tg~~~ky 286 (303)
T 2v03_A 209 IRRWPTEYLPGIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAAAN--PDAVVVAIICDRGDRY 286 (303)
T ss_dssp CCCCCGGGCCTTCCGGGCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHHS--TTCEEEEEECBBSGGG
T ss_pred CCcCCCCCCCcccchHHCCEEEEECHHHHHHHHHHHHHHcCceEcHHHHHHHHHHHHHHHHC--CCCeEEEEECCCCccc
Confidence 57888888999999999999999999999999999999999999999999999999998875 5789999999999999
Q ss_pred cChhhcHHHHHHHhc
Q 037531 84 LSSEMFDAERQAAEN 98 (106)
Q Consensus 84 ~s~~~~~~~~~~~~~ 98 (106)
+++.+|++|+ ..++
T Consensus 287 ~~~~~~~~~~-~~~~ 300 (303)
T 2v03_A 287 LSTGVFGEEH-FSQG 300 (303)
T ss_dssp GGGTTTCC-------
T ss_pred ccchhcHHHH-Hhcc
Confidence 9997777654 4444
No 12
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=99.77 E-value=1.5e-18 Score=129.04 Aligned_cols=89 Identities=39% Similarity=0.702 Sum_probs=81.2
Q ss_pred CCcccCCCCCCCcCcccCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCc
Q 037531 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGE 81 (106)
Q Consensus 2 ~~i~GiG~~~~p~~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~ 81 (106)
+.++||+.+.+|.+++...+|+.+.|+|+|++++++.|++++|+++|||||++++++++++++.. ++++||+++||+|.
T Consensus 215 ~~~~gl~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~a~aa~~~~~~~~~-~~~~vv~i~tg~g~ 293 (304)
T 1ve1_A 215 HGFQGMGPGFIPENLDLSLLDGVIQVWEEDAFPLARRLAREEGLFLGMSSGGIVWAALQVARELG-PGKRVACISPDGGW 293 (304)
T ss_dssp CSCTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHHHC-TTCEEEEEECBBSG
T ss_pred cccCCCCCCCCChhhhhhhCCEEEEECHHHHHHHHHHHHHHhCcEEcHHHHHHHHHHHHHHHhcC-CCCeEEEEECCCCc
Confidence 56789999989999999999999999999999999999999999999999999999999988763 67899999999999
Q ss_pred cccChhhcHH
Q 037531 82 RYLSSEMFDA 91 (106)
Q Consensus 82 kY~s~~~~~~ 91 (106)
||+++.+|++
T Consensus 294 ky~~~~~~~~ 303 (304)
T 1ve1_A 294 KYLSTPLYAE 303 (304)
T ss_dssp GGTTSTTTC-
T ss_pred cCCCcccCCC
Confidence 9999966653
No 13
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=99.76 E-value=2.1e-18 Score=128.47 Aligned_cols=87 Identities=55% Similarity=0.871 Sum_probs=70.4
Q ss_pred CCcccCCCCCCCcCcccCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCc
Q 037531 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGE 81 (106)
Q Consensus 2 ~~i~GiG~~~~p~~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~ 81 (106)
+.++|++.+++|.+++...+|+++.|+|+|++++++.|++++|+++|||||++++++++++++. .++++||+++||+|.
T Consensus 218 ~~~~g~~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~epssa~a~aa~~~~~~~~-~~~~~vv~i~tg~g~ 296 (308)
T 2egu_A 218 HKIQGIGAGFVPDILDTSIYDGVITVTTEEAFAAARRAAREEGILGGISSGAAIHAALKVAKEL-GKGKKVLAIIPSNGE 296 (308)
T ss_dssp ------------CCCCCCSCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHHH-CTTCEEEEEECBBGG
T ss_pred cccCccCCCCCCHhHHHHhcCeEEEECHHHHHHHHHHHHHHhCceEcHHHHHHHHHHHHHHHhc-CCCCeEEEEECCCCc
Confidence 4578899888899999999999999999999999999999999999999999999999998775 368899999999999
Q ss_pred cccChhhc
Q 037531 82 RYLSSEMF 89 (106)
Q Consensus 82 kY~s~~~~ 89 (106)
||+++.+|
T Consensus 297 ky~~~~~~ 304 (308)
T 2egu_A 297 RYLSTPLY 304 (308)
T ss_dssp GGTTSSTT
T ss_pred ccccchhc
Confidence 99999666
No 14
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=99.72 E-value=2.7e-17 Score=122.48 Aligned_cols=84 Identities=54% Similarity=0.837 Sum_probs=78.0
Q ss_pred CCcccCCCCCCCcCcccCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCc
Q 037531 2 HKIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGE 81 (106)
Q Consensus 2 ~~i~GiG~~~~p~~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~ 81 (106)
+.++|++.+.+|.+++...+|+.+.|+|+|++++++.|++++|+++|||||++++++++++++. .++++||+++||+|.
T Consensus 219 ~~~~gi~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~-~~~~~vv~i~tg~g~ 297 (303)
T 1o58_A 219 HAIQGIGAGFVPKILDRSVIDEVITVEDEEAYEMARYLAKKEGLLVGISSGANVAAALKVAQKL-GPDARVVTVAPDHAE 297 (303)
T ss_dssp CCCTTSCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHTS-CTTCCEEEEECBBGG
T ss_pred eecCcCCCCCcCHHHHHHhCCeEEEECHHHHHHHHHHHHHHcCceEcHHHHHHHHHHHHHHHHc-CCCCEEEEEECCCCc
Confidence 4678999888999999999999999999999999999999999999999999999999998875 367899999999999
Q ss_pred cccCh
Q 037531 82 RYLSS 86 (106)
Q Consensus 82 kY~s~ 86 (106)
||+++
T Consensus 298 ky~~~ 302 (303)
T 1o58_A 298 RYLSI 302 (303)
T ss_dssp GCTTT
T ss_pred ccccC
Confidence 99987
No 15
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=99.48 E-value=6e-14 Score=106.20 Aligned_cols=82 Identities=21% Similarity=0.290 Sum_probs=69.0
Q ss_pred cccCCCCCCCcCcc------cCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhC-CCCCEEEEEe
Q 037531 4 IQGIGIGFVPSVLD------VSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAE-NAGKLIVVIF 76 (106)
Q Consensus 4 i~GiG~~~~p~~~~------~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~-~~~~~Vv~i~ 76 (106)
.+||+.+. |.+++ .+..|+++.|+|+|++++++.|++++|+++|||||++++++++++++.. .++++||+++
T Consensus 238 a~gl~~~~-~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~~~~~~vv~i~ 316 (351)
T 3aey_A 238 ATAIRIGN-PASWQGAVRAKEESGGVIEAVTDEEILFAYRYLAREEGIFCEPASAAAMAGVFKLLREGRLEPESTVVLTL 316 (351)
T ss_dssp CGGGCCSS-CTTHHHHHHHHHHHTCEEEEECHHHHHHHHHHHHHHTCCCBCHHHHHHHHHHHHHHHTTCSCTTCEEEEEE
T ss_pred hHhhcCCC-CCCHHHHHHHHHHhCCeEEEECHHHHHHHHHHHHHhCCEEECchHHHHHHHHHHHHHhcCCCCCCeEEEEE
Confidence 46777655 43433 3456799999999999999999999999999999999999999987532 3578999999
Q ss_pred CCCCccccCh
Q 037531 77 PSSGERYLSS 86 (106)
Q Consensus 77 ~D~g~kY~s~ 86 (106)
||+|.||+++
T Consensus 317 tg~~~k~~~~ 326 (351)
T 3aey_A 317 TGHGLKDPAT 326 (351)
T ss_dssp CBBGGGCHHH
T ss_pred CCCCCCCHHH
Confidence 9999999998
No 16
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=99.46 E-value=1.2e-13 Score=105.10 Aligned_cols=82 Identities=20% Similarity=0.261 Sum_probs=69.0
Q ss_pred cccCCCCCCCcCcc------cCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhC-CCCCEEEEEe
Q 037531 4 IQGIGIGFVPSVLD------VSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAE-NAGKLIVVIF 76 (106)
Q Consensus 4 i~GiG~~~~p~~~~------~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~-~~~~~Vv~i~ 76 (106)
.+||+.+. |.+++ .+..|+++.|+|+|++++++.|++++|+++|||||++++++++++++.. .++++||+++
T Consensus 247 a~gl~~~~-~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~eGi~~epssa~alaa~~~~~~~~~~~~~~~vv~i~ 325 (360)
T 2d1f_A 247 ATAIRIGS-PASWTSAVEAQQQSKGRFLAASDEEILAAYHLVARVEGVFVEPASAASIAGLLKAIDDGWVARGSTVVCTV 325 (360)
T ss_dssp CGGGCCSS-CTTHHHHHHHHHHHTCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHHTSSCTTCEEEEEE
T ss_pred HHHhCCCC-CCcHHHHHHHHHHhCCeEEEECHHHHHHHHHHHHHhcCeeECchHHHHHHHHHHHHHhCCCCCCCeEEEEe
Confidence 46777665 44443 2456799999999999999999999999999999999999999987532 3578999999
Q ss_pred CCCCccccCh
Q 037531 77 PSSGERYLSS 86 (106)
Q Consensus 77 ~D~g~kY~s~ 86 (106)
||+|.||+++
T Consensus 326 tg~~~k~~~~ 335 (360)
T 2d1f_A 326 TGNGLKDPDT 335 (360)
T ss_dssp CBBGGGCHHH
T ss_pred CCCCcCCHHH
Confidence 9999999998
No 17
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=99.46 E-value=1.1e-13 Score=104.83 Aligned_cols=82 Identities=21% Similarity=0.319 Sum_probs=68.8
Q ss_pred cccCCCCCCCcCcc------cCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhC-CCCCEEEEEe
Q 037531 4 IQGIGIGFVPSVLD------VSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAE-NAGKLIVVIF 76 (106)
Q Consensus 4 i~GiG~~~~p~~~~------~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~-~~~~~Vv~i~ 76 (106)
.+||+.+. |.+++ .+..|+++.|+|+|++++++.|++++|+++|||||++++++++++++.. .++++||+++
T Consensus 240 a~gl~~~~-~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~~~~~~vv~i~ 318 (352)
T 2zsj_A 240 ATAIKIGN-PYSWKSALKAAQESGGKIDAVSDSEILYAYKLIASTEGVFCEPASAASVAGLIKLVREGFFKGGEVVTCTL 318 (352)
T ss_dssp CGGGCCSS-CTTHHHHHHHHHHHTCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHTTCCCSCCEEEEEE
T ss_pred hHHhcCCC-CCcHHHHHHHHHHhCCeEEEECHHHHHHHHHHHHHhCCeeECchHHHHHHHHHHHHHhCCCCCCCeEEEEe
Confidence 46777655 33333 2456799999999999999999999999999999999999999987532 3578999999
Q ss_pred CCCCccccCh
Q 037531 77 PSSGERYLSS 86 (106)
Q Consensus 77 ~D~g~kY~s~ 86 (106)
||+|.||+++
T Consensus 319 tg~~~k~~~~ 328 (352)
T 2zsj_A 319 TGNGLKDPDT 328 (352)
T ss_dssp CBBGGGCHHH
T ss_pred CCCCccChHH
Confidence 9999999998
No 18
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=99.45 E-value=1.2e-13 Score=106.62 Aligned_cols=74 Identities=28% Similarity=0.368 Sum_probs=64.6
Q ss_pred CcCcccCccC-eEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCccccCh
Q 037531 13 PSVLDVSILD-EVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERYLSS 86 (106)
Q Consensus 13 p~~~~~~~vD-~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY~s~ 86 (106)
|.+++...+| +++.|+|+|++++++.|+++|||+++||||++++++++++++...+..++|+++||+|+||+++
T Consensus 303 ~~~~~~~~~dg~~~~Vsd~ea~~a~~~l~~~eGi~~~pssa~alaa~~~l~~~g~~~~~~vVviltg~G~k~~~~ 377 (389)
T 1wkv_A 303 MLWINMLDISYTLAEVTLEEAMEAVVEVARSDGLVIGPSGGAAVKALAKKAAEGDLEPGDYVVVVPDTGFKYLSL 377 (389)
T ss_dssp CSHHHHSCCCCEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHTTCSCSEEEEEEECBBGGGCHHH
T ss_pred chhhhhheeccEEEEECHHHHHHHHHHHHHHcCCeEChHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCccCHHH
Confidence 4455667788 9999999999999999999999999999999999999999873212356888999999999998
No 19
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*
Probab=99.36 E-value=6.3e-13 Score=101.44 Aligned_cols=69 Identities=29% Similarity=0.392 Sum_probs=63.3
Q ss_pred ccCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCccccCh
Q 037531 17 DVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERYLSS 86 (106)
Q Consensus 17 ~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY~s~ 86 (106)
....+|+++.|+|+|++++++.|+++||+++|+|||++++++.+++++. .++++||+++||+|.||+++
T Consensus 312 ~~~~~~~~~~V~d~e~~~a~~~l~~~egi~~~~~sa~a~a~a~~l~~~~-~~~~~vv~i~tg~g~k~~~~ 380 (388)
T 1v8z_A 312 KKIQRAEYVTVTDEEALKAFHELSRTEGIIPALESAHAVAYAMKLAKEM-SRDEIIIVNLSGRGDKDLDI 380 (388)
T ss_dssp HHTTSEEEEEEEHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHTS-CTTCEEEEEECBBSGGGHHH
T ss_pred HhcCCcEEEEECHHHHHHHHHHHHHhcCCeecccHHHHHHHHHHHHHhc-CCCCEEEEEECCCCccCHHH
Confidence 3456799999999999999999999999999999999999999998875 36889999999999999997
No 20
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Probab=99.33 E-value=7e-13 Score=101.83 Aligned_cols=72 Identities=25% Similarity=0.377 Sum_probs=64.9
Q ss_pred CcccCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCccccCh
Q 037531 15 VLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERYLSS 86 (106)
Q Consensus 15 ~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY~s~ 86 (106)
.+..+.+|+++.|+|+|++++++.|+++|||++|++||++++++.++++++..++++||+++||+|.||+++
T Consensus 314 ~l~~~~~~~~~~V~d~e~~~a~~~l~~~egi~~~~~sa~a~a~a~~l~~~~~~~~~~vv~i~tg~g~k~~~~ 385 (396)
T 1qop_B 314 YLNSIGRADYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQPEKEQLLVVNLSGRGDKDIFT 385 (396)
T ss_dssp HHHHTTSSEEEEEEHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHHSTTSCEEEEEEECBBCGGGHHH
T ss_pred HHHhcCCeEEEEECHHHHHHHHHHHHHhcCCccccchHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHH
Confidence 345677899999999999999999999999999999999999999998875215789999999999999987
No 21
>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A
Probab=99.33 E-value=2.5e-12 Score=99.92 Aligned_cols=71 Identities=27% Similarity=0.344 Sum_probs=61.4
Q ss_pred CcccCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCccccCh
Q 037531 15 VLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERYLSS 86 (106)
Q Consensus 15 ~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY~s~ 86 (106)
.+....+|+++.|+|+|++++++.|+++|||+++++||+++++++++++++. ++++||+++||+|+||+++
T Consensus 341 ~l~~~~~~~~~~Vsd~e~~~a~~~l~~~eGi~~~~esa~A~a~a~~l~~~~~-~~~~vvvilsG~g~kd~~~ 411 (422)
T 2o2e_A 341 WLKEAGRVDYRPITDSEAMDAFGLLCRMEGIIPAIESAHAVAGALKLGVELG-RGAVIVVNLSGRGDKDVET 411 (422)
T ss_dssp ------CCEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC-TTCEEEEECCSCSSSHHHH
T ss_pred HHHHhCCeeEEEECHHHHHHHHHHHHHHcCCccCchHHHHHHHHHHHHHhcC-CCCEEEEEeCCCCCCCHHH
Confidence 3455667999999999999999999999999999999999999999988763 6789999999999999987
No 22
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=99.28 E-value=5.5e-12 Score=95.57 Aligned_cols=69 Identities=22% Similarity=0.296 Sum_probs=59.7
Q ss_pred ccCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHH-hCCCCCEEEEEeCCCCccccCh
Q 037531 17 DVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKR-AENAGKLIVVIFPSSGERYLSS 86 (106)
Q Consensus 17 ~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~-~~~~~~~Vv~i~~D~g~kY~s~ 86 (106)
..+.+|+++.|+|+|++++++.|++++|+++|||||++++++++...+ ...++++||+++|+ |.+|+++
T Consensus 252 ~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~~~~~~Vv~i~sG-G~~d~~~ 321 (346)
T 3l6b_A 252 IRDLVDDIFTVTEDEIKCATQLVWERMKLLIEPTAGVGVAAVLSQHFQTVSPEVKNICIVLSG-GNVDLTS 321 (346)
T ss_dssp HHHHCCEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHSGGGGGSCTTCCEEEEEECB-CCCCTTG
T ss_pred HHHcCCeEEEECHHHHHHHHHHHHHHCCcEEcHHHHHHHHHHHHhhhhhccCCCCeEEEEcCC-CCCCHHH
Confidence 457789999999999999999999999999999999999999865532 22357889999986 8999998
No 23
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=99.28 E-value=1.8e-12 Score=97.91 Aligned_cols=81 Identities=16% Similarity=0.154 Sum_probs=65.6
Q ss_pred CcccCCCCC---CCcCcccCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHH--HhCCCCCEEEEEeC
Q 037531 3 KIQGIGIGF---VPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAK--RAENAGKLIVVIFP 77 (106)
Q Consensus 3 ~i~GiG~~~---~p~~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~--~~~~~~~~Vv~i~~ 77 (106)
..+||+.+. .|..++++.+|+++.|+|+|++++++.|++++|+++|||||+++++++++.+ +. ++++||+|+|
T Consensus 247 ~a~gl~~~~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~--~~~~Vv~i~t 324 (342)
T 2gn0_A 247 LADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQRNKVITEGAGALACAALLSGKLDSHI--QNRKTVSIIS 324 (342)
T ss_dssp SCGGGCCSSCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCBCCCTGGGHHHHHHHHTTTHHHH--TTSEEEEEEC
T ss_pred cccccCCCCccHHHHHHHHHcCCEEEEECHHHHHHHHHHHHHHcCeEEcHHHHHHHHHHHHhhhhccC--CCCEEEEEEC
Confidence 456777542 3334567889999999999999999999999999999999999999998765 33 5789999999
Q ss_pred CCCccccCh
Q 037531 78 SSGERYLSS 86 (106)
Q Consensus 78 D~g~kY~s~ 86 (106)
|+ ...++.
T Consensus 325 Gg-~~d~~~ 332 (342)
T 2gn0_A 325 GG-NIDLSR 332 (342)
T ss_dssp BC-CCCHHH
T ss_pred CC-CCCHHH
Confidence 94 455443
No 24
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=99.27 E-value=3.2e-12 Score=96.57 Aligned_cols=75 Identities=20% Similarity=0.221 Sum_probs=67.4
Q ss_pred ccCCC-CCCCcCcccCccCeEEEeCHHHHHHHHHHHHHHhCceeeec-hHHHHHHHHHHHHHhC-CCCCEEEEEeCCC
Q 037531 5 QGIGI-GFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGIS-SGAAAAAAIKIAKRAE-NAGKLIVVIFPSS 79 (106)
Q Consensus 5 ~GiG~-~~~p~~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~S-sga~l~aa~~~a~~~~-~~~~~Vv~i~~D~ 79 (106)
+|||. +..|..++++.+|+.+.|+|+|++++++.|++++||++||| ||++++++++++++.. .++++||+|+|++
T Consensus 254 ~gl~~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epsYsa~a~aa~~~~~~~~~~~~~~~Vv~i~tGG 331 (342)
T 4d9b_A 254 GQLALTATADIHLWDDYFAPGYGVPNDAGMEAVKLLASLEGVLLDPVYTGKAMAGLIDGISQKRFNDDGPILFIHTGG 331 (342)
T ss_dssp HHTTCCCCCCCEEECTTSTTCTTCCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHHHHHTCSSSSSCEEEEECCC
T ss_pred HHcCCCCccceEEEecCCCceEecCCHHHHHHHHHHHHhcCccccccHHHHHHHHHHHHHHcCCCCCCCeEEEEECCC
Confidence 47776 78888999999999999999999999999999999999999 9999999999987632 3678999999995
No 25
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=99.27 E-value=6.9e-12 Score=93.80 Aligned_cols=76 Identities=18% Similarity=0.217 Sum_probs=62.4
Q ss_pred CcccCCCCCCC---cCcccCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Q 037531 3 KIQGIGIGFVP---SVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSS 79 (106)
Q Consensus 3 ~i~GiG~~~~p---~~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~ 79 (106)
..+|++.+..+ ..+.++.+|+.+.|+|+|++++++.|++++|+++|||||++++++++++++. ++++||+|+||+
T Consensus 233 ~a~gl~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~eps~a~alaa~~~~~~~~--~~~~vv~i~tGg 310 (323)
T 1v71_A 233 IADGAQTQHLGNYTFSIIKEKVDDILTVSDEELIDCLKFYAARMKIVVEPTGCLSFAAARAMKEKL--KNKRIGIIISGG 310 (323)
T ss_dssp SCTTSCCSSCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHTCCCCCGGGGHHHHHHHHTGGGG--TTCEEEEEECBC
T ss_pred ccccccCCCCcHHHHHHHHHhCCEEEEECHHHHHHHHHHHHHhcCeEEcHHHHHHHHHHHHhHHhc--CCCeEEEEeCCC
Confidence 34566655422 1233478999999999999999999999999999999999999999987664 578999999996
Q ss_pred C
Q 037531 80 G 80 (106)
Q Consensus 80 g 80 (106)
+
T Consensus 311 ~ 311 (323)
T 1v71_A 311 N 311 (323)
T ss_dssp C
T ss_pred C
Confidence 5
No 26
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=99.26 E-value=5e-12 Score=94.62 Aligned_cols=74 Identities=22% Similarity=0.267 Sum_probs=65.4
Q ss_pred ccCC-CCCCCcCcccCccCeEEEeCHHHHHHHHHHHHHHhCceeeec-hHHHHHHHHHHHHHhCCCCCEEEEEeCCCC
Q 037531 5 QGIG-IGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGIS-SGAAAAAAIKIAKRAENAGKLIVVIFPSSG 80 (106)
Q Consensus 5 ~GiG-~~~~p~~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~S-sga~l~aa~~~a~~~~~~~~~Vv~i~~D~g 80 (106)
.++| .+.+|..++++.+|+ +.|+|+|++++++.|++++||++||+ ||++++++++++++... +++||+|+|++.
T Consensus 236 ~~~g~~~~~~~~~~~~~~~~-~~v~d~e~~~a~~~l~~~~gi~~ep~ssa~a~aa~~~~~~~~~~-~~~Vv~i~tGG~ 311 (325)
T 1j0a_A 236 ELLGVKVEVRPELYDYSFGE-YGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLVDLARKGEL-GEKILFIHTGGI 311 (325)
T ss_dssp HHTTCCCCSCCEEEECSTTS-TTCCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHHHHTTCS-CSEEEEEECCCH
T ss_pred HhcCCCCCCCcEEecCcccC-CCCCCHHHHHHHHHHHHhhCcccccchHHHHHHHHHHHHHcCCC-CCcEEEEECCCc
Confidence 3566 457888999999999 99999999999999999999999995 99999999999887543 789999999864
No 27
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus}
Probab=99.25 E-value=4.1e-12 Score=98.44 Aligned_cols=68 Identities=25% Similarity=0.379 Sum_probs=62.2
Q ss_pred cCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCccccCh
Q 037531 18 VSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERYLSS 86 (106)
Q Consensus 18 ~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY~s~ 86 (106)
...+|+++.|+|+|++++++.|+++|||+++++||++++++++++++.. ++++||+++||+|.||+++
T Consensus 342 ~~~~~~~~~Vsd~e~~~a~~~l~~~egi~~~~~sa~a~a~a~~~~~~~~-~~~~Vv~vlsG~g~kd~~~ 409 (418)
T 1x1q_A 342 DAGVAEYASVTDEEALEGFKLLARLEGIIPALESAHAIAYAAKVVPEMD-KDQVVVINLSGRGDKDVTE 409 (418)
T ss_dssp HHTSEEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHTTTSC-TTCEEEEEECBBGGGTHHH
T ss_pred hccCeEEEEECHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHhcC-CCCeEEEEECCCCCCCHHH
Confidence 4567999999999999999999999999999999999999999887653 6789999999999999987
No 28
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=99.25 E-value=9.9e-12 Score=92.33 Aligned_cols=63 Identities=13% Similarity=0.222 Sum_probs=57.2
Q ss_pred cccCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCc
Q 037531 16 LDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGE 81 (106)
Q Consensus 16 ~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~ 81 (106)
+.++.+|+.+.|+|+|++++++.|++++|+++|||||++++++++++++ . +++||+|+||++.
T Consensus 245 ~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~--~-~~~vv~i~tgg~~ 307 (311)
T 1ve5_A 245 ILRERVDGILTVSEEALLEAERLLFTRTKQVVEPTGALPLAAVLEHGAR--L-PQTLALLLSGGNR 307 (311)
T ss_dssp HHHHHCCEEEEECHHHHHHHHHHHHHHTCBCCCGGGGHHHHHHHHHGGG--S-CSEEEEEECBCCC
T ss_pred HHHhcCCEEEEECHHHHHHHHHHHHHhcCceEchHHHHHHHHHHhhhhc--c-CCEEEEEECCCCC
Confidence 4567889999999999999999999999999999999999999998766 3 7899999999763
No 29
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=99.25 E-value=2.2e-11 Score=93.17 Aligned_cols=87 Identities=22% Similarity=0.177 Sum_probs=65.6
Q ss_pred ccCCCCCCCc-Ccc--cCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHH-----HHHh--CCCCCEEEE
Q 037531 5 QGIGIGFVPS-VLD--VSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKI-----AKRA--ENAGKLIVV 74 (106)
Q Consensus 5 ~GiG~~~~p~-~~~--~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~-----a~~~--~~~~~~Vv~ 74 (106)
+||+.+.++. +++ ....|+.+.|+|+|++++++.|++++|+++|||||++++++++. .++. ..++++||+
T Consensus 257 ~gl~~~~~~~~~~~~~~~~~~~~~~Vsd~e~~~a~~~l~~~eGi~~epssa~alaa~~~~~~~~l~~~g~~~~~~~~Vv~ 336 (372)
T 1p5j_A 257 KALGVKTVGSQALKLFQEHPIFSEVISDQEAVAAIEKFVDDEKILVEPACGAALAAVYSHVIQKLQLEGNLRTPLPSLVV 336 (372)
T ss_dssp GGGCCSSCCHHHHHHHHHSCEEEEEECHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHTTHHHHHHHTTSSCSSCSCEEE
T ss_pred cccCCCCCCHHHHHHHhhcCCEEEEECHHHHHHHHHHHHHHcCCeechhHHHHHHHHHHhhHHHHhhccccCCCCCeEEE
Confidence 4667666652 343 34568899999999999999999999999999999999998753 2221 135789999
Q ss_pred EeCCCCccccChhhcHHHH
Q 037531 75 IFPSSGERYLSSEMFDAER 93 (106)
Q Consensus 75 i~~D~g~kY~s~~~~~~~~ 93 (106)
|+||++ |++...+.+++
T Consensus 337 i~tgg~--~~~~~~~~~~~ 353 (372)
T 1p5j_A 337 IVCGGS--NISLAQLRALK 353 (372)
T ss_dssp ECCBCS--SCCHHHHHHHH
T ss_pred EECCCC--CCCHHHHHHHH
Confidence 999987 55544566544
No 30
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=99.23 E-value=2.2e-11 Score=90.82 Aligned_cols=83 Identities=22% Similarity=0.156 Sum_probs=64.9
Q ss_pred cccCCCCCCCc-Ccc--cCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHH-----HHHh--CCCCCEEE
Q 037531 4 IQGIGIGFVPS-VLD--VSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKI-----AKRA--ENAGKLIV 73 (106)
Q Consensus 4 i~GiG~~~~p~-~~~--~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~-----a~~~--~~~~~~Vv 73 (106)
.+||+.+++|. +++ ....|+.+.|+|+|++++++.|++++|+++|||||++++++.+. .++. ..++++||
T Consensus 216 a~gl~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~eps~a~a~aa~~~~~~~~~~~~g~~~~~~~~vv 295 (318)
T 2rkb_A 216 AKSLGAKTVAARALECMQVCKIHSEVVEDTEAVSAVQQLLDDERMLVEPACGAALAAIYSGLLRRLQAEGCLPPSLTSVV 295 (318)
T ss_dssp CGGGCCSBCCHHHHHHHHHSCEEEEEECHHHHHHHHHHHHHHHCBCCCHHHHHHHHHHHTSHHHHHHHTTSSCSSCSCEE
T ss_pred ecccCCCCCCHHHHHHHHHcCCEEEEECHHHHHHHHHHHHHhcCcEEchhHHHHHHHHHHhhHHHHhhccccCCCCCeEE
Confidence 34677766663 444 34568899999999999999999999999999999999998742 2221 13578999
Q ss_pred EEeCCCCccccCh
Q 037531 74 VIFPSSGERYLSS 86 (106)
Q Consensus 74 ~i~~D~g~kY~s~ 86 (106)
+|+||++..+++.
T Consensus 296 ~i~tgg~~~~~~~ 308 (318)
T 2rkb_A 296 VIVCGGNNINSRE 308 (318)
T ss_dssp EEECBCSSCCHHH
T ss_pred EEECCCCCCCHHH
Confidence 9999998777775
No 31
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1
Probab=99.23 E-value=5.6e-12 Score=98.07 Aligned_cols=61 Identities=15% Similarity=0.058 Sum_probs=56.6
Q ss_pred cCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCccccCh
Q 037531 21 LDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERYLSS 86 (106)
Q Consensus 21 vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY~s~ 86 (106)
.++++.|+|+|++++++.| +++|++++||||+++++++++++ ++++||+++||+|.||+++
T Consensus 325 ~~~~~~Vsd~e~~~a~~~l-~~eGi~~~p~sa~a~aa~~~~~~----~~~~vV~i~tg~~~K~~~~ 385 (428)
T 1vb3_A 325 ELGYAAVDDETTQQTMREL-KELGYTSEPHAAVAYRALRDQLN----PGEYGLFLGTAHPAKFKES 385 (428)
T ss_dssp GSEEEECCHHHHHHHHHHH-HHTTCCCCHHHHHHHHHHHTTCC----TTCEEEEEECBCGGGGHHH
T ss_pred CcEEEEECHHHHHHHHHHH-HHCCeEECchHHHHHHHHHHHhC----CCCcEEEEeCCCCCCCHHH
Confidence 5799999999999999999 99999999999999999987654 4679999999999999998
No 32
>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A*
Probab=99.22 E-value=7.2e-12 Score=98.97 Aligned_cols=81 Identities=22% Similarity=0.330 Sum_probs=62.7
Q ss_pred cccCCCCCCCcCccc--CccCe----EEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhC-CCCCEEEEEe
Q 037531 4 IQGIGIGFVPSVLDV--SILDE----VVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAE-NAGKLIVVIF 76 (106)
Q Consensus 4 i~GiG~~~~p~~~~~--~~vD~----~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~-~~~~~Vv~i~ 76 (106)
.+||+.+ .|.++.+ ..+|+ ++.|+|+|++++++ +++++|++++||||++++++++++++.. .++++||+++
T Consensus 354 a~gi~i~-~p~~~~~~~~~~~~~~g~~~~Vsd~e~~~ai~-l~~~eGi~~ePssA~alaa~~~~~~~g~~~~~~~vV~i~ 431 (486)
T 1e5x_A 354 ASAIQIG-DPVSIDRAVYALKKCNGIVEEATEEELMDAMA-QADSTGMFICPHTGVALTALFKLRNQGVIAPTDRTVVVS 431 (486)
T ss_dssp ----------CCCHHHHHHHHHTTCEEEEECHHHHHHHHH-HHHHTTCCCCHHHHHHHHHHHHHHHTTSSCTTCCEEEEE
T ss_pred CccccCC-CCccHHHHHHHHhccCCeEEEECHHHHHHHHH-HHHHCCeEEChhHHHHHHHHHHHHHhcCCCCCCeEEEEe
Confidence 4566555 4666664 35677 99999999999999 7889999999999999999999987642 3578999999
Q ss_pred CCCCccccCh
Q 037531 77 PSSGERYLSS 86 (106)
Q Consensus 77 ~D~g~kY~s~ 86 (106)
||+|.||+++
T Consensus 432 Tg~~~k~~~~ 441 (486)
T 1e5x_A 432 TAHGLKFTQS 441 (486)
T ss_dssp CBCGGGGHHH
T ss_pred CCCCccCHHH
Confidence 9999999998
No 33
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=99.20 E-value=1.4e-11 Score=92.40 Aligned_cols=71 Identities=18% Similarity=0.302 Sum_probs=61.6
Q ss_pred CcccCccCeEEEeCHHHHHHHHHHHHHHhCceeeec-hHHHHHHHHHHHHHhC-CCCCEEEEEeCCCCccccCh
Q 037531 15 VLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGIS-SGAAAAAAIKIAKRAE-NAGKLIVVIFPSSGERYLSS 86 (106)
Q Consensus 15 ~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~S-sga~l~aa~~~a~~~~-~~~~~Vv~i~~D~g~kY~s~ 86 (106)
.+..+.+|+.+.|+|+|++++++.|++++||++||+ ||++++++++++++.. .++++||+|+|+ |.+|++.
T Consensus 258 ~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~ep~ysa~alaa~~~~~~~~~~~~~~~Vv~i~tG-G~~~~~~ 330 (338)
T 1tzj_A 258 VLDERFAGPEYGLPNEGTLEAIRLCARTEGMLTDPVYEGKSMHGMIEMVRNGEFPEGSRVLYAHLG-GVPALNG 330 (338)
T ss_dssp EEECTTSCSBTTBCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHHHHTTCSCTTCEEEEEECC-CGGGGGG
T ss_pred EEecCcccceeecCCHHHHHHHHHHHHhcCCccccchHHHHHHHHHHHHHcCCCCCCCeEEEEECC-Ccccccc
Confidence 345677899999999999999999999999999996 9999999999987642 357899999875 8999887
No 34
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=99.17 E-value=3e-11 Score=92.89 Aligned_cols=81 Identities=17% Similarity=0.289 Sum_probs=65.4
Q ss_pred ccCCCCC---CCcCcc----cCccCeEEEeCHHHHHHHHHHHHHHhC----ceeeechHHHHHHHHHHH---------HH
Q 037531 5 QGIGIGF---VPSVLD----VSILDEVVRVTSNEAIQTAKLLGAKEG----LLVGISSGAAAAAAIKIA---------KR 64 (106)
Q Consensus 5 ~GiG~~~---~p~~~~----~~~vD~~i~V~d~ea~~~~r~l~~~eG----i~~G~Ssga~l~aa~~~a---------~~ 64 (106)
++|+.++ .|..++ ++.+|+++.|+|+|++++++.|+++|| +++|||||++++++++++ ++
T Consensus 283 ~tia~gl~~~~p~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~eG~~~~i~~epssa~alaa~~~~~~~~~~~~l~~~ 362 (398)
T 4d9i_A 283 ATIMAGLACGEPNPLGWEILRNCATQFISCQDSVAALGMRVLGNPYGNDPRIISGESGAVGLGVLAAVHYHPQRQSLMEK 362 (398)
T ss_dssp --CCTTCCCSSCCHHHHHHHHHHCCEEEEECTHHHHHHHHHHHSCSTTCCCCCCCHHHHHHHHHHHHHHHSTTHHHHHHH
T ss_pred CceeccccCCCCCHHHHHHHHHcCCeEEEECHHHHHHHHHHHHHhhCCCCcEEECchHHHHHHHHHHhhhhhhhHHHHHh
Confidence 4455444 465555 578999999999999999999999999 999999999999999884 33
Q ss_pred hC-CCCCEEEEEeCCCCccccCh
Q 037531 65 AE-NAGKLIVVIFPSSGERYLSS 86 (106)
Q Consensus 65 ~~-~~~~~Vv~i~~D~g~kY~s~ 86 (106)
.. .++++||+++|+ |.++++.
T Consensus 363 ~~~~~~~~Vv~i~tG-G~~d~~~ 384 (398)
T 4d9i_A 363 LALNKDAVVLVISTE-GDTDVKH 384 (398)
T ss_dssp TTCCTTCEEEEEECB-CCSSHHH
T ss_pred cCCCCCCEEEEEeCC-CCCCHHH
Confidence 21 367899999995 8998886
No 35
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=99.17 E-value=5.4e-11 Score=90.61 Aligned_cols=78 Identities=17% Similarity=0.144 Sum_probs=64.3
Q ss_pred ccCCCCCC---CcCcccCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCc
Q 037531 5 QGIGIGFV---PSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGE 81 (106)
Q Consensus 5 ~GiG~~~~---p~~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~ 81 (106)
+|++.+.+ +..+.++.+|+.+.|+|+|++++++.|++++|++++||||++++++++++++...++++||+++||++.
T Consensus 269 ~gl~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~ep~sa~alaa~~~~~~~~~~~g~~Vv~i~tGgn~ 348 (366)
T 3iau_A 269 DGVAVALVGEYTFAKCQELIDGMVLVANDGISAAIKDVYDEGRNILETSGAVAIAGAAAYCEFYKIKNENIVAIASGANM 348 (366)
T ss_dssp GGGCCSSCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHTTCCSCEEEEEECBCCC
T ss_pred hhhcCCCCcHHHHHHHHhcCCCceeECHHHHHHHHHHHHHHcCcEEcHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCCCC
Confidence 45554332 233456789999999999999999999999999999999999999999987654357899999999876
Q ss_pred c
Q 037531 82 R 82 (106)
Q Consensus 82 k 82 (106)
.
T Consensus 349 d 349 (366)
T 3iau_A 349 D 349 (366)
T ss_dssp C
T ss_pred C
Confidence 3
No 36
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=99.16 E-value=9.1e-11 Score=93.52 Aligned_cols=69 Identities=19% Similarity=0.147 Sum_probs=61.8
Q ss_pred CcccCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCccc
Q 037531 15 VLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERY 83 (106)
Q Consensus 15 ~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY 83 (106)
.+.++.+|+++.|+|+|++++++.|++++|++++||||++++++++++++...++++||+|+||++.+.
T Consensus 253 ~l~~~~vd~~v~Vsd~ei~~ai~~L~~~~givvEPsgA~alAal~~~~~~~~~~g~~VV~I~tGgn~d~ 321 (514)
T 1tdj_A 253 RLCQEYLDDIITVDSDAICAAMKDLFEDVRAVAEPSGALALAGMKKYIALHNIRGERLAHILSGANVNF 321 (514)
T ss_dssp HHHTTSCCEEEEECHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHTCCSCEEEEECCCCCCCT
T ss_pred HHHHHhCCeEEEECHHHHHHHHHHHHHHcCeEEcHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCCCH
Confidence 356789999999999999999999999999999999999999999988764335789999999998774
No 37
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=99.14 E-value=3.3e-11 Score=94.13 Aligned_cols=69 Identities=14% Similarity=0.127 Sum_probs=60.6
Q ss_pred cCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHH---h---C-C----CCCEEEEEeCCCCccccCh
Q 037531 18 VSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKR---A---E-N----AGKLIVVIFPSSGERYLSS 86 (106)
Q Consensus 18 ~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~---~---~-~----~~~~Vv~i~~D~g~kY~s~ 86 (106)
++.+|+++.|+|+|++++++.|+++|||++|||||++++++++++++ . . . ++++||++.|+++.++.+.
T Consensus 354 ~~~~d~~~~Vsd~e~~~a~~~L~~~eGi~~epssaaalAa~~~l~~~~~~~~~~~l~~~~~~~~~vv~i~TGG~~~~~~~ 433 (442)
T 3ss7_X 354 ERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNTTHLVWATGGGMVPEEE 433 (442)
T ss_dssp GGGCCEEEEECHHHHHHHHHHHHHHHCCCCCGGGGGGGGHHHHHHHCHHHHHHHTCCHHHHHTCEEEEEECBCTTCCHHH
T ss_pred HhhCCeEEEECHHHHHHHHHHHHHHCCCeEcHHHHHHHHHHHHHHhchhhHHhcCCCcccCCCCeEEEEECCCCCCCHHH
Confidence 47899999999999999999999999999999999999999999862 1 0 1 1689999999999997764
No 38
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=99.13 E-value=4.2e-11 Score=90.13 Aligned_cols=77 Identities=17% Similarity=0.237 Sum_probs=64.0
Q ss_pred ccCCCCC--CCcCcccCccCeEEEeCHHHHHHHHHHHHHHhCceeeec-hHHHHHHHHHHHHHhC-CCCCEEEEEeCCCC
Q 037531 5 QGIGIGF--VPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGIS-SGAAAAAAIKIAKRAE-NAGKLIVVIFPSSG 80 (106)
Q Consensus 5 ~GiG~~~--~p~~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~S-sga~l~aa~~~a~~~~-~~~~~Vv~i~~D~g 80 (106)
+|||... .+..++.+.+|+++.|+|+|++++++.|++++||++||+ ||++++++++++++.. .++++||+|+|++.
T Consensus 247 ~~ig~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~egi~~ep~~sa~alaa~~~~~~~~~~~~~~~Vv~i~tGG~ 326 (341)
T 1f2d_A 247 KLIGVEHEFKDFTLDTRFAYPCYGVPNEGTIEAIRTCAEQEGVLTDPVYEGKSMQGLIALIKEDYFKPGANVLYVHLGGA 326 (341)
T ss_dssp HHHTCCCCCSCCCEECTTSTTBTTBCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHHHHTTCSCTTCEEEEEECCCG
T ss_pred HHcCCCCCcCeEEEecCcccceEecCCHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHhCCCCCCCeEEEEECCch
Confidence 4566432 334678889999999999999999999999999999995 9999999999988742 36789999999865
Q ss_pred c
Q 037531 81 E 81 (106)
Q Consensus 81 ~ 81 (106)
.
T Consensus 327 ~ 327 (341)
T 1f2d_A 327 P 327 (341)
T ss_dssp G
T ss_pred H
Confidence 3
No 39
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=98.97 E-value=2.4e-09 Score=81.52 Aligned_cols=82 Identities=22% Similarity=0.207 Sum_probs=61.7
Q ss_pred ccCCCCCCCc-Ccc--cCccCeEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHH-----HHHHHhC-C-CCCEEEE
Q 037531 5 QGIGIGFVPS-VLD--VSILDEVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAI-----KIAKRAE-N-AGKLIVV 74 (106)
Q Consensus 5 ~GiG~~~~p~-~~~--~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~-----~~a~~~~-~-~~~~Vv~ 74 (106)
+|||.+.++. .++ ++..+..+.|+|+|++++++.|+++||+++|||||++++++. ++.++.. . ++++||+
T Consensus 257 ~gl~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~egi~~eps~aaalaa~~~~k~~~l~~~g~~~~~~~~Vv~ 336 (364)
T 4h27_A 257 KALGVKTVGAQALKLFQEHPIFSEVISDQEAVAAIEKFVDDEKILVEPACGAALAAVYSHVIQKLQLEGNLRTPLPSLVV 336 (364)
T ss_dssp GGGCCSSCCHHHHHHHTTSCEEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHHHHHHHTTSSCSSCCEEEE
T ss_pred HHhCCCCCcHHHHHHHHhcCCEEEEECHHHHHHHHHHHHHHCCCeEcccHHHHHHHHHhhhhHHhhhccCcCCCCCeEEE
Confidence 4666666543 232 345677788999999999999999999999999999999985 4443321 1 2579999
Q ss_pred EeCCCCccccCh
Q 037531 75 IFPSSGERYLSS 86 (106)
Q Consensus 75 i~~D~g~kY~s~ 86 (106)
++|++....++.
T Consensus 337 v~tGG~~~d~~~ 348 (364)
T 4h27_A 337 IVCGGSNISLAQ 348 (364)
T ss_dssp EECBCSSCCHHH
T ss_pred EECCCCCCCHHH
Confidence 999987666554
No 40
>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, MON lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1
Probab=98.92 E-value=1.4e-09 Score=86.57 Aligned_cols=64 Identities=9% Similarity=0.176 Sum_probs=57.6
Q ss_pred eEEEeCHHHHHHHHHHHHHHh----CceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCccccCh
Q 037531 23 EVVRVTSNEAIQTAKLLGAKE----GLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERYLSS 86 (106)
Q Consensus 23 ~~i~V~d~ea~~~~r~l~~~e----Gi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY~s~ 86 (106)
+++.|+|+|++++++.|++++ |++++|+||+++++++++.++...++.++|++.+++|.||...
T Consensus 391 ~~~~Vsd~e~~~ai~~l~~~~~~~~G~~~ep~tAv~~aa~~~~~~~g~~~~~~vV~l~Ta~~~Kf~~~ 458 (514)
T 1kl7_A 391 TSERVSNEETSETIKKIYESSVNPKHYILDPHTAVGVCATERLIAKDNDKSIQYISLSTAHPAKFADA 458 (514)
T ss_dssp EEEECCHHHHHHHHHHHHHHCCSSTTCCCCHHHHHHHHHHHHHHHHHCCTTSEEEEEECBCGGGGHHH
T ss_pred eEEEECHHHHHHHHHHHHHhCCCCCCEEEcccHHHHHHHHHHHHHhccCCCCcEEEEECCchhhhHHH
Confidence 489999999999999999999 9999999999999999998763235779999999999998765
No 41
>4f4f_A Threonine synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.90A {Brucella melitensis BV}
Probab=98.42 E-value=3.8e-07 Score=71.95 Aligned_cols=59 Identities=20% Similarity=0.227 Sum_probs=53.1
Q ss_pred EEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCccccCh
Q 037531 24 VVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERYLSS 86 (106)
Q Consensus 24 ~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY~s~ 86 (106)
.+.|+|+|+.++++.+++++|++++|+||+++++++++. .++.++|++.+++|.|+.++
T Consensus 365 ~~~VsD~ei~~ai~~l~~~~g~~vEP~~Ava~aa~~~~~----~~~~~~V~l~Ta~~~Kf~~~ 423 (468)
T 4f4f_A 365 AGRSTVDETAATIESVLSKDGYLLDPHSAIGVKVAREKA----SGTAPMVVLATAHPAKFPDA 423 (468)
T ss_dssp EEECCHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHC----CSSSCEEEEECBCGGGSHHH
T ss_pred EEEECHHHHHHHHHHHHHHCCEEECHhHHHHHHHHHHHh----CCCCeEEEEecCCccccHHH
Confidence 689999999999999999999999999999999998863 25678999999999997554
No 42
>3v7n_A Threonine synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; 1.40A {Burkholderia thailandensis}
Probab=98.21 E-value=4.4e-07 Score=71.93 Aligned_cols=60 Identities=15% Similarity=0.116 Sum_probs=52.9
Q ss_pred eEEEeCHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCccccCh
Q 037531 23 EVVRVTSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERYLSS 86 (106)
Q Consensus 23 ~~i~V~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY~s~ 86 (106)
....|+|+|++++++++++++|++++|+||+++++++++.+ ++..+|++.+.+|.|+.++
T Consensus 383 ~~~~VsDee~~~air~l~~~~G~l~dPhtAva~aaa~~~~~----~~~~~V~l~Ta~p~Kf~~~ 442 (487)
T 3v7n_A 383 VSGRSTHADRIATIRDVFERYRTMIDTHTADGLKVAREHLR----PGVPMVVLETAQPIKFGES 442 (487)
T ss_dssp EEECCCHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHTTSCC----TTSCEEEEECBCGGGGHHH
T ss_pred eEEEECHHHHHHHHHHHHHHcCEEEChhHHHHHHHHHHhhC----CCCcEEEEecCCccccHHH
Confidence 35789999999999999999999999999999999987642 4678999999999997665
No 43
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae}
Probab=76.72 E-value=4.5 Score=28.74 Aligned_cols=69 Identities=7% Similarity=0.008 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHh-CceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCccccChhhcHHHHHHHhcC
Q 037531 31 EAIQTAKLLGAKE-GLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERYLSSEMFDAERQAAENM 99 (106)
Q Consensus 31 ea~~~~r~l~~~e-Gi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY~s~~~~~~~~~~~~~~ 99 (106)
++....+...++. .++++.|+|.==.+.+.++.+...++..+.+++.|+|..+..|.-|-+.+...-++
T Consensus 29 ~~~~~l~~a~~~~~~v~va~SGGkDS~vLL~ll~~~~~~~~~i~vv~iDtg~~~~et~~~v~~~~~~~gl 98 (261)
T 2oq2_A 29 TPQEIIAWSIVTFPHLFQTTAFGLTGLVTIDMLSKLSEKYYMPELLFIDTLHHFPQTLTLKNEIEKKYYQ 98 (261)
T ss_dssp SHHHHHHHHHHHCSSEEEECCCCHHHHHHHHHHHHHTTTSCCCEEEEECCSCBCHHHHHHHHHHHHHHTG
T ss_pred CHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCccCCCeeEEEecCCCCCHHHHHHHHHHHHHhCC
Confidence 4455555555554 48899998887777777776653212467778889999987775555655555555
No 44
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2
Probab=75.09 E-value=4.3 Score=30.03 Aligned_cols=73 Identities=14% Similarity=0.153 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHH-hCceeeechHHHHHHHHHHHHHhCCC-CCEEEEEeCCCCccccChhhcHHHHHHHhcCcc
Q 037531 29 SNEAIQTAKLLGAK-EGLLVGISSGAAAAAAIKIAKRAENA-GKLIVVIFPSSGERYLSSEMFDAERQAAENMAY 101 (106)
Q Consensus 29 d~ea~~~~r~l~~~-eGi~~G~Ssga~l~aa~~~a~~~~~~-~~~Vv~i~~D~g~kY~s~~~~~~~~~~~~~~~~ 101 (106)
..+++..++.++++ ..+.++.|+|.==.+.+.++.+...+ +..+.++..|.|.++..+.-|-+.+...-++++
T Consensus 32 e~~a~~ilr~~~~~~~~ivVa~SGGkDS~vLL~Ll~~~~~~~~~~i~vv~vDtg~~~~et~~~v~~~~~~~gi~l 106 (325)
T 1zun_A 32 EAESIHIIREVAAEFDNPVMLYSIGKDSAVMLHLARKAFFPGKLPFPVMHVDTRWKFQEMYRFRDQMVEEMGLDL 106 (325)
T ss_dssp HHHHHHHHHHHHHHCSSEEEECCSSHHHHHHHHHHHHHHTTSCCSSCEEEECCSCCCHHHHHHHHHHHHTTTCCE
T ss_pred HHHHHHHHHHHHHhCCCEEEEEcChHHHHHHHHHHHHhccccCCCEEEEEEECCCCCHHHHHHHHHHHHHcCCCE
Confidence 55677888877765 36889999887777777777654211 345777888999987766555565555556554
No 45
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=74.10 E-value=0.95 Score=31.83 Aligned_cols=57 Identities=12% Similarity=0.120 Sum_probs=34.4
Q ss_pred CHHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCccccCh
Q 037531 28 TSNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERYLSS 86 (106)
Q Consensus 28 ~d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY~s~ 86 (106)
++.+|++.-..+. ...|++|.|++.+..-+.++.+.+...+ .|-++++.++.+.++.
T Consensus 6 ~~~~~~~~~~~l~-~k~IllgvTGsiaa~k~~~ll~~L~~~g-~V~vv~T~~A~~fv~~ 62 (209)
T 1mvl_A 6 RDRQDMEVNTTPR-KPRVLLAASGSVAAIKFGNLCHCFTEWA-EVRAVVTKSSLHFLDK 62 (209)
T ss_dssp --------------CCEEEEEECSSGGGGGHHHHHHHHHTTS-EEEEEECTGGGGTCCG
T ss_pred cchhhcccccccC-CCEEEEEEeCcHHHHHHHHHHHHHhcCC-CEEEEEcchHHHhcCH
Confidence 3566666666663 4579999998877666777777775456 9999999999988654
No 46
>2nrk_A Hypothetical protein GRPB; UPF0157, PFAM04229, glutamate-rich protein, enterococcus FAE PSI-2, protein structure initiative; 1.65A {Enterococcus faecalis} SCOP: d.218.1.14
Probab=68.97 E-value=0.96 Score=30.78 Aligned_cols=47 Identities=23% Similarity=0.184 Sum_probs=39.3
Q ss_pred CcccCCCCCCCcCcccCccCeEEEeCHHHHHHHHHHHHHHhCceeee
Q 037531 3 KIQGIGIGFVPSVLDVSILDEVVRVTSNEAIQTAKLLGAKEGLLVGI 49 (106)
Q Consensus 3 ~i~GiG~~~~p~~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~~G~ 49 (106)
.|+.||...||+..-+..||=.+.|++.+.+.......+..|+..=+
T Consensus 36 ~I~HIGSTsVpGl~AKPIIDI~v~V~~~~~~~~~~~~L~~~Gy~~~~ 82 (173)
T 2nrk_A 36 KVEHIGSTSVPNLAAKPIIDFLVIVEEIEKVDLLQWEFERIGYEYMG 82 (173)
T ss_dssp EEEEESGGGSTTCCBCSCEEEEEEESCSGGGGGGHHHHHHTTCEECT
T ss_pred eEEEECCCCCCCCCcCCeeEEEeccCCHHHHHHHHHHHHHCCCEECC
Confidence 47889999999999999999999998877777677777778886543
No 47
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=63.60 E-value=5.2 Score=27.20 Aligned_cols=68 Identities=16% Similarity=0.135 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHhC--ceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCccccChhhcHHHHHHHhcCcc
Q 037531 31 EAIQTAKLLGAKEG--LLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERYLSSEMFDAERQAAENMAY 101 (106)
Q Consensus 31 ea~~~~r~l~~~eG--i~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY~s~~~~~~~~~~~~~~~~ 101 (106)
++.+..+...++.| ++++.|+|.==.+++.++.+.. ..+.++..|.|..+..+.-|-+.+...-|+++
T Consensus 31 ~~~~~l~~~~~~~~~~v~Va~SGGkDS~vLL~ll~~~~---~~v~~v~vd~g~~~~e~~~~v~~~~~~~gi~~ 100 (215)
T 1sur_A 31 DAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIR---PDIPVILTDTGYLFPETYRFIDELTDKLKLNL 100 (215)
T ss_dssp CHHHHHHHHHHHCCSEEEEECCCCTTHHHHHHHHHHHS---TTCEEEEEECSCBCHHHHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhC---CCCeEEEeeCCCCCHHHHHHHHHHHHHhCCcE
Confidence 45555666666654 8999999877777777776653 35677788888876544334344444445443
No 48
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=62.04 E-value=8.5 Score=27.07 Aligned_cols=68 Identities=16% Similarity=0.135 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHhC--ceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCccccChhhcHHHHHHHhcCcc
Q 037531 31 EAIQTAKLLGAKEG--LLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERYLSSEMFDAERQAAENMAY 101 (106)
Q Consensus 31 ea~~~~r~l~~~eG--i~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY~s~~~~~~~~~~~~~~~~ 101 (106)
++.+..+...++-| ++++.|+|.==.+++.++.+.. ..|.+++.|.|..+..+.-|-+.+...-++++
T Consensus 32 ~~~~~l~~a~~~~~~~v~va~SGG~DS~vLL~ll~~~~---~~v~vv~idtg~~~~et~~~~~~~~~~~gi~~ 101 (252)
T 2o8v_A 32 DAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIR---PDIPVILTDTGYLFPETYRFIDELTDKLKLNL 101 (252)
T ss_dssp CHHHHHHHHHTTSCSCEEEECCCSTTHHHHHHHHHHHS---TTCEEEECCCSCBCHHHHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHhC---CCCeEEEecCCCCCHHHHHHHHHHHHHhCCce
Confidence 45555666666654 8999998877667777776653 25678889999886666444454544445543
No 49
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=61.96 E-value=4.1 Score=27.69 Aligned_cols=44 Identities=11% Similarity=0.228 Sum_probs=35.7
Q ss_pred hCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCccccCh
Q 037531 43 EGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERYLSS 86 (106)
Q Consensus 43 eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY~s~ 86 (106)
..|++|.|++.+..-+.++.+.+...+..|-++++.++.+.++.
T Consensus 6 k~IllgvTGs~aa~k~~~ll~~L~~~g~~V~vv~T~~A~~fi~~ 49 (175)
T 3qjg_A 6 ENVLICLCGSVNSINISHYIIELKSKFDEVNVIASTNGRKFING 49 (175)
T ss_dssp CEEEEEECSSGGGGGHHHHHHHHTTTCSEEEEEECTGGGGGSCH
T ss_pred CEEEEEEeCHHHHHHHHHHHHHHHHCCCEEEEEECcCHHHHhhH
Confidence 35788888887777788888887656789999999999998775
No 50
>2goy_A Adenosine phosphosulfate reductase; iron sulfur cluster, nucleotide binding, thiosulfonate intermediate, oxidoreductase; HET: ADX; 2.70A {Pseudomonas aeruginosa}
Probab=55.30 E-value=10 Score=26.98 Aligned_cols=67 Identities=15% Similarity=0.132 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHH--hCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCccccChhhcHHHHHHHhcCcc
Q 037531 31 EAIQTAKLLGAK--EGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERYLSSEMFDAERQAAENMAY 101 (106)
Q Consensus 31 ea~~~~r~l~~~--eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY~s~~~~~~~~~~~~~~~~ 101 (106)
.+.+..+...++ ..+.++.| |.==.+.+.++.+.. ..+.+++.|.|..+..|.-|-+.+...-++++
T Consensus 41 ~a~~~l~~a~~~~g~~i~Va~S-GkDS~vLL~Ll~~~~---~~i~vv~iDtg~~~~et~~~v~~~~~~~gi~l 109 (275)
T 2goy_A 41 SPQDILKAAFEHFGDELWISFS-GAEDVVLVDMAWKLN---RNVKVFSLDTGRLHPETYRFIDQVREHYGIAI 109 (275)
T ss_dssp CHHHHHHHHHHHHSTTEEEECC-SSTTHHHHHHHHHHC---TTCCEEEECCSCCCHHHHHHHHHHHHHHTCCC
T ss_pred CHHHHHHHHHHHcCCCEEEEee-cHHHHHHHHHHHHhC---CCceEEEEeCCCCCHHHHHHHHHHHHHHCCeE
Confidence 345555555555 46899988 776666667766652 34667888999988777555555555555554
No 51
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=52.78 E-value=6 Score=26.97 Aligned_cols=44 Identities=9% Similarity=0.202 Sum_probs=34.8
Q ss_pred CceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCccccChh
Q 037531 44 GLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERYLSSE 87 (106)
Q Consensus 44 Gi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY~s~~ 87 (106)
.|++|.|++.+..-+.++.+.+...+..|-++++.++.+.++..
T Consensus 4 ~IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~ 47 (181)
T 1g63_A 4 KLLICATASINVININHYIVELKQHFDEVNILFSPSSKNFINTD 47 (181)
T ss_dssp CEEEEECSCGGGGGHHHHHHHHTTTSSCEEEEECGGGGGTSCGG
T ss_pred EEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEchhHHHHHHHH
Confidence 57788888777677788888876457789999999999987653
No 52
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=51.82 E-value=21 Score=24.39 Aligned_cols=33 Identities=21% Similarity=0.119 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHhC-----ceeeechHHHHHHHHHH
Q 037531 29 SNEAIQTAKLLGAKEG-----LLVGISSGAAAAAAIKI 61 (106)
Q Consensus 29 d~ea~~~~r~l~~~eG-----i~~G~Ssga~l~aa~~~ 61 (106)
-+|+.++.+.+.++.+ .++|-|.|+++++..-+
T Consensus 78 ~~D~~~al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~ 115 (274)
T 2qru_A 78 LRTLTETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTK 115 (274)
T ss_dssp HHHHHHHHHHHHHHTTTTCCEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccCCcEEEEEECHHHHHHHHHHH
Confidence 4667777777765422 58899999998876544
No 53
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=47.89 E-value=48 Score=25.66 Aligned_cols=50 Identities=18% Similarity=0.316 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCcc
Q 037531 30 NEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGER 82 (106)
Q Consensus 30 ~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~k 82 (106)
++.++..++......++++.|+|.==.++..++.+. +.++.++..|+|..
T Consensus 197 ~~~i~~ir~~~~~~kvvvalSGGvDSsvla~ll~~~---g~~v~av~vd~g~~ 246 (503)
T 2ywb_A 197 EELLREVRERAGKDRVLLAVSGGVDSSTLALLLAKA---GVDHLAVFVDHGLL 246 (503)
T ss_dssp HHHHHHHHHHHTTSEEEEEECSSHHHHHHHHHHHHH---TCEEEEEEEECSCS
T ss_pred HHHHHhhhhhccCccEEEEecCCcchHHHHHHHHHc---CCeEEEEEEeCCCC
Confidence 345556666555567999999987766666666653 46888888899864
No 54
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=45.95 E-value=2.8 Score=23.80 Aligned_cols=31 Identities=29% Similarity=0.474 Sum_probs=23.1
Q ss_pred CcccCccCeEEEeCHHHHHHHHHHHHHHhCce
Q 037531 15 VLDVSILDEVVRVTSNEAIQTAKLLGAKEGLL 46 (106)
Q Consensus 15 ~~~~~~vD~~i~V~d~ea~~~~r~l~~~eGi~ 46 (106)
++|-+.+-..+.|+.++.+...++|+++ |++
T Consensus 25 ildI~~~a~kygV~kdeV~~~LrrLe~K-GLI 55 (59)
T 2xvc_A 25 FLDIEHFSKVYGVEKQEVVKLLEALKNK-GLI 55 (59)
T ss_dssp EEEHHHHHHHHCCCHHHHHHHHHHHHHT-TSE
T ss_pred EEeHHHHHHHhCCCHHHHHHHHHHHHHC-CCe
Confidence 3455555566789999999999999765 764
No 55
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=44.87 E-value=6.8 Score=27.16 Aligned_cols=44 Identities=7% Similarity=0.086 Sum_probs=33.9
Q ss_pred hCceeeechHHHHH-HHHHHHHHhCCCCCEEEEEeCCCCccccCh
Q 037531 43 EGLLVGISSGAAAA-AAIKIAKRAENAGKLIVVIFPSSGERYLSS 86 (106)
Q Consensus 43 eGi~~G~Ssga~l~-aa~~~a~~~~~~~~~Vv~i~~D~g~kY~s~ 86 (106)
..|++|.|++.+.. -+.++.+.+...+..|-++++.++.+..+.
T Consensus 8 k~I~lgiTGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i~~ 52 (201)
T 3lqk_A 8 KHVGFGLTGSHCTYHEVLPQMERLVELGAKVTPFVTHTVQTTDTK 52 (201)
T ss_dssp CEEEEECCSCGGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTTCC
T ss_pred CEEEEEEEChHHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHHHH
Confidence 45888888887666 566777666445778999999999998765
No 56
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=44.51 E-value=36 Score=26.17 Aligned_cols=32 Identities=25% Similarity=0.241 Sum_probs=24.1
Q ss_pred ceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Q 037531 45 LLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSS 79 (106)
Q Consensus 45 i~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~ 79 (106)
++.|.|+|-.++.++.++... +..++.+.-++
T Consensus 54 LVtGaSsGiGlA~AialAf~~---GA~vi~v~~~~ 85 (401)
T 4ggo_A 54 LVLGCSNGYGLASRITAAFGY---GAATIGVSFEK 85 (401)
T ss_dssp EEESCSSHHHHHHHHHHHHHH---CCEEEEEECCC
T ss_pred EEECCCCcHHHHHHHHHHhhC---CCCEEEEecCC
Confidence 899999999999999998542 44555555443
No 57
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=43.99 E-value=11 Score=26.12 Aligned_cols=45 Identities=20% Similarity=0.298 Sum_probs=35.0
Q ss_pred HhCceeeechHHHHHHHHHHHHHhCC-CCCEEEEEeCCCCccccCh
Q 037531 42 KEGLLVGISSGAAAAAAIKIAKRAEN-AGKLIVVIFPSSGERYLSS 86 (106)
Q Consensus 42 ~eGi~~G~Ssga~l~aa~~~a~~~~~-~~~~Vv~i~~D~g~kY~s~ 86 (106)
...|++|.|++.+..-+.++.+.+.. .+..|-++++.++.+.++.
T Consensus 19 ~k~IllgvTGsiaa~k~~~lv~~L~~~~g~~V~vv~T~~A~~fi~~ 64 (206)
T 1qzu_A 19 KFHVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVTTERAKHFYSP 64 (206)
T ss_dssp SEEEEEEECSSGGGGTHHHHHHHHC---CEEEEEEECTGGGGSSCG
T ss_pred CCEEEEEEeChHHHHHHHHHHHHHhcccCCEEEEEECHhHHHHhCH
Confidence 34689998888877777888888764 5678999999999988764
No 58
>1ujs_A Actin-binding LIM protein homologue; VHP domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 2l3x_A
Probab=36.75 E-value=9.9 Score=23.24 Aligned_cols=17 Identities=35% Similarity=0.401 Sum_probs=13.2
Q ss_pred HHHHHHHhCceeeechH
Q 037531 36 AKLLGAKEGLLVGISSG 52 (106)
Q Consensus 36 ~r~l~~~eGi~~G~Ssg 52 (106)
...+=++.|+|.|||||
T Consensus 72 q~~lKK~~gLF~~~~~~ 88 (88)
T 1ujs_A 72 RNELKKQARLFSGPSSG 88 (88)
T ss_dssp HHHHHHHTTCCCCSCCC
T ss_pred HHHHHHHcCCcCCCCCC
Confidence 44566778999999985
No 59
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A
Probab=34.64 E-value=34 Score=24.75 Aligned_cols=51 Identities=18% Similarity=0.316 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCcc
Q 037531 30 NEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGER 82 (106)
Q Consensus 30 ~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~k 82 (106)
++.++..++......+.++.|+|.==..+..++.+.. +..+.++..|.|..
T Consensus 8 ~~~~~~ir~~v~~~kvlvalSGGvDSsvla~ll~~~~--g~~v~av~vd~g~~ 58 (308)
T 2dpl_A 8 EEKVREIRETVGDSKAIIALSGGVDSSTAAVLAHKAI--GDRLHAVFVNTGFL 58 (308)
T ss_dssp HHHHHHHHHHHTTSCEEEECCSSHHHHHHHHHHHHHH--GGGEEEEEEECSCC
T ss_pred HHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHHHhh--CCCEEEEEEcCCCC
Confidence 3566667776666789999999876666666665431 34677888888864
No 60
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae}
Probab=34.48 E-value=66 Score=23.23 Aligned_cols=58 Identities=10% Similarity=0.097 Sum_probs=35.9
Q ss_pred CceeeechHHHHHHHHHHHHHhC-------------------CCCCEEEEEeCCCCccccChhhcHHHHHHHhcCcc
Q 037531 44 GLLVGISSGAAAAAAIKIAKRAE-------------------NAGKLIVVIFPSSGERYLSSEMFDAERQAAENMAY 101 (106)
Q Consensus 44 Gi~~G~Ssga~l~aa~~~a~~~~-------------------~~~~~Vv~i~~D~g~kY~s~~~~~~~~~~~~~~~~ 101 (106)
.+.++.|+|.==.+.+.++.+.. .++..+.+++.|+|..+..+.-|-+.+...-++++
T Consensus 55 ~i~vafSGGKDS~VLL~L~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~vv~iDtg~~fpet~~fv~~~~~~ygl~l 131 (306)
T 2wsi_A 55 EISFSYNGGKDCQVLLLLYLSCLWEYFFIKAQNSQFDFEFQSFPMQRLPTVFIDQEETFPTLENFVLETSERYCLSL 131 (306)
T ss_dssp SEEEECCSCHHHHHHHHHHHHHHHHHHHHHHHHC--------CCCCCEEEEECCCTTCCHHHHHHHHHHHHHTTEEE
T ss_pred CEEEEecCCHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCeeEEEEeCCCCCHHHHHHHHHHHHHcCCCE
Confidence 47898888765444444443210 01356888999999887777656565555545544
No 61
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=31.74 E-value=98 Score=24.11 Aligned_cols=54 Identities=24% Similarity=0.412 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCccccC
Q 037531 30 NEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERYLS 85 (106)
Q Consensus 30 ~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY~s 85 (106)
++.++..+.......++++.|+|.==.++..++.+.. +.++.++..|+|.+...
T Consensus 218 ~~~i~~i~~~v~~~kvlvalSGGvDSsvla~ll~~~~--G~~v~av~vd~g~~~~~ 271 (527)
T 3tqi_A 218 EDSIRDIQEKVGKEQVIVGLSGGVDSAVTATLVHKAI--GDQLVCVLVDTGLLRLN 271 (527)
T ss_dssp HHHHHHHHHHHTTSCEEEECTTTHHHHHHHHHHHHHH--GGGEEEEEECCSCSCTT
T ss_pred HHHHHHHHHhcCCCeEEEEEecCcCHHHHHHHHHHHh--CCeEEEEEeccCCCChh
Confidence 4666677777777889999999975555555554431 35788999999987433
No 62
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=31.10 E-value=6.6 Score=27.06 Aligned_cols=45 Identities=18% Similarity=0.220 Sum_probs=34.8
Q ss_pred HhCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCccccCh
Q 037531 42 KEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERYLSS 86 (106)
Q Consensus 42 ~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY~s~ 86 (106)
...|++|.|++.+..-+.++.+.+...+..|-++++.++.+.++.
T Consensus 8 ~k~IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~ 52 (194)
T 1p3y_1 8 DKKLLIGICGSISSVGISSYLLYFKSFFKEIRVVMTKTAEDLIPA 52 (194)
T ss_dssp GCEEEEEECSCGGGGGTHHHHHHHTTTSSEEEEEECHHHHHHSCH
T ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEchhHHHHHHH
Confidence 346888888888777778888877555778999999998887654
No 63
>4f06_A Extracellular ligand-binding receptor; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: MSE PHB; 1.30A {Rhodopseudomonas palustris} PDB: 4evs_A*
Probab=30.74 E-value=55 Score=23.37 Aligned_cols=36 Identities=22% Similarity=0.201 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHhCc--eeeechHHHHHHHHHHHHH
Q 037531 29 SNEAIQTAKLLGAKEGL--LVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 29 d~ea~~~~r~l~~~eGi--~~G~Ssga~l~aa~~~a~~ 64 (106)
.+.+.+.+++|..++++ ++|+.+.....++..++++
T Consensus 57 p~~a~~~a~~Li~~d~V~aiiG~~~S~~~~a~~~~~~~ 94 (371)
T 4f06_A 57 PAQSKALAQELIVKEKVQYLAGLYFTPNAMAVAPLLQE 94 (371)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEECCSHHHHHHHGGGHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEecccccchHHHHHHHHh
Confidence 46789999999988885 6777555444555556554
No 64
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=29.67 E-value=1.2e+02 Score=19.80 Aligned_cols=36 Identities=14% Similarity=0.096 Sum_probs=23.6
Q ss_pred CHHHHHHHHHHHHHHhC----ceeeechHHHHHHHHHHHHHh
Q 037531 28 TSNEAIQTAKLLGAKEG----LLVGISSGAAAAAAIKIAKRA 65 (106)
Q Consensus 28 ~d~ea~~~~r~l~~~eG----i~~G~Ssga~l~aa~~~a~~~ 65 (106)
+-++..+....+.+..+ +++|.|-|+.+ ++.++.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~--a~~~a~~~ 117 (309)
T 3u1t_A 78 RLQDHVAYMDGFIDALGLDDMVLVIHDWGSVI--GMRHARLN 117 (309)
T ss_dssp CHHHHHHHHHHHHHHHTCCSEEEEEEEHHHHH--HHHHHHHC
T ss_pred CHHHHHHHHHHHHHHcCCCceEEEEeCcHHHH--HHHHHHhC
Confidence 45555566666666656 68999999966 44455554
No 65
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=28.95 E-value=46 Score=21.79 Aligned_cols=35 Identities=17% Similarity=0.245 Sum_probs=23.7
Q ss_pred echHHHHHHHHHHHHHhC---CCCCEEEEEeCCCCccc
Q 037531 49 ISSGAAAAAAIKIAKRAE---NAGKLIVVIFPSSGERY 83 (106)
Q Consensus 49 ~Ssga~l~aa~~~a~~~~---~~~~~Vv~i~~D~g~kY 83 (106)
+.+++++..+++.+.+.. +...+++++++|+-...
T Consensus 88 ~~g~T~l~~al~~a~~~l~~~~~~~~~ivllTDG~~~~ 125 (218)
T 3ibs_A 88 SKQGTAIGEAINLATRSFTPQEGVGRAIIVITDGENHE 125 (218)
T ss_dssp CSCSCCHHHHHHHHHTTSCSCSSCCEEEEEEECCTTCC
T ss_pred CCCCCcHHHHHHHHHHHHhhCCCCCcEEEEEcCCCCCC
Confidence 345667778887776542 13468999999986553
No 66
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=28.80 E-value=96 Score=19.41 Aligned_cols=42 Identities=7% Similarity=0.021 Sum_probs=22.8
Q ss_pred ceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCccccChhhcHHHH
Q 037531 45 LLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERYLSSEMFDAER 93 (106)
Q Consensus 45 i~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY~s~~~~~~~~ 93 (106)
++.|+++-+.+....+...+ .+..|. ++ |.|..+..+|.+++
T Consensus 23 lIaGG~GiaPl~sm~~~l~~---~~~~v~-l~---g~R~~~~~~~~~el 64 (142)
T 3lyu_A 23 AIGAYTGIVEVYPIAKAWQE---IGNDVT-TL---HVTFEPMVILKEEL 64 (142)
T ss_dssp EEEETTHHHHHHHHHHHHHH---TTCEEE-EE---EEEEGGGCCSHHHH
T ss_pred EEECcCcHHHHHHHHHHHHh---cCCcEE-EE---EeCCHHHhhHHHHH
Confidence 56677777777766665543 233433 33 45555554555544
No 67
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=28.31 E-value=7.4 Score=27.19 Aligned_cols=43 Identities=5% Similarity=0.195 Sum_probs=33.1
Q ss_pred hCceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCccccC
Q 037531 43 EGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERYLS 85 (106)
Q Consensus 43 eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY~s 85 (106)
..|++|.|++.+..-+.++.+.+...+..|-++++.++.+.++
T Consensus 5 k~IllgvTGaiaa~k~~~ll~~L~~~g~eV~vv~T~~A~~fi~ 47 (209)
T 3zqu_A 5 ERITLAMTGASGAQYGLRLLDCLVQEEREVHFLISKAAQLVMA 47 (209)
T ss_dssp SEEEEEECSSSCHHHHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECccHHHHHH
Confidence 3578888888776777788777654578899999999888654
No 68
>3hpw_C Protein CCDA; alpha+beta, SH3 domain, intrinsically disordered, toxin/toxin repressor complex; 1.45A {Escherichia coli} PDB: 3g7z_C 3tcj_T
Probab=28.03 E-value=47 Score=16.66 Aligned_cols=19 Identities=11% Similarity=0.160 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHhCcee
Q 037531 29 SNEAIQTAKLLGAKEGLLV 47 (106)
Q Consensus 29 d~ea~~~~r~l~~~eGi~~ 47 (106)
..+|++....+.+++|++.
T Consensus 12 N~~ai~~~N~~ve~~Gl~~ 30 (36)
T 3hpw_C 12 NQEGMAEVARFIEMNGSFA 30 (36)
T ss_dssp HHHHHHHHHHHHHHHCCHH
T ss_pred HHHHHHHHHHHHHHcCCCH
Confidence 4689999999999999873
No 69
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=27.90 E-value=7.6 Score=26.88 Aligned_cols=42 Identities=10% Similarity=0.215 Sum_probs=30.5
Q ss_pred ceeeechHHHHHHHHHHHHHhCCC-CCEEEEEeCCCCccccCh
Q 037531 45 LLVGISSGAAAAAAIKIAKRAENA-GKLIVVIFPSSGERYLSS 86 (106)
Q Consensus 45 i~~G~Ssga~l~aa~~~a~~~~~~-~~~Vv~i~~D~g~kY~s~ 86 (106)
|++|.|++.+..-+.++.+.+... +..|-++++.++.+.++.
T Consensus 3 IllgvTGsiaa~k~~~ll~~L~~~~g~~V~vv~T~~A~~fi~~ 45 (197)
T 1sbz_A 3 LIVGMTGATGAPLGVALLQALREMPNVETHLVMSKWAKTTIEL 45 (197)
T ss_dssp EEEEECSSSCHHHHHHHHHHHHTCTTCEEEEEECHHHHHHHHH
T ss_pred EEEEEeChHHHHHHHHHHHHHHhccCCEEEEEECchHHHHhHH
Confidence 567777765555677777776544 678999999998886653
No 70
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=27.12 E-value=24 Score=24.51 Aligned_cols=42 Identities=5% Similarity=0.036 Sum_probs=25.1
Q ss_pred hCceeeechHHHHHH-HHHHHHHhCCCCCEEEEEeCCCCcccc
Q 037531 43 EGLLVGISSGAAAAA-AIKIAKRAENAGKLIVVIFPSSGERYL 84 (106)
Q Consensus 43 eGi~~G~Ssga~l~a-a~~~a~~~~~~~~~Vv~i~~D~g~kY~ 84 (106)
..|++|.|++.+..- +.++.+.+...+..|-++++.++.+-+
T Consensus 6 k~IllgiTGsiaayk~~~~ll~~L~~~g~eV~vv~T~~A~~vl 48 (207)
T 3mcu_A 6 KRIGFGFTGSHCTYEEVMPHLEKLIAEGAEVRPVVSYTVQSTN 48 (207)
T ss_dssp CEEEEEECSCGGGGTTSHHHHHHHHHTTCEEEEEECC------
T ss_pred CEEEEEEEChHHHHHHHHHHHHHHHhCCCEEEEEEehHHHHHH
Confidence 357888887765443 556666654457889999999999443
No 71
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=26.05 E-value=59 Score=22.76 Aligned_cols=21 Identities=10% Similarity=0.203 Sum_probs=16.8
Q ss_pred CceeeechHHHHHHHHHHHHH
Q 037531 44 GLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 44 Gi~~G~Ssga~l~aa~~~a~~ 64 (106)
-++.|+|+|-..+.|++++++
T Consensus 5 vlVTGas~GIG~aia~~la~~ 25 (247)
T 3ged_A 5 VIVTGGGHGIGKQICLDFLEA 25 (247)
T ss_dssp EEEESTTSHHHHHHHHHHHHT
T ss_pred EEEecCCCHHHHHHHHHHHHC
Confidence 366788888888888888875
No 72
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=25.99 E-value=74 Score=21.92 Aligned_cols=23 Identities=35% Similarity=0.491 Sum_probs=18.5
Q ss_pred HhCceeeechHHHHHHHHHHHHH
Q 037531 42 KEGLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 42 ~eGi~~G~Ssga~l~aa~~~a~~ 64 (106)
+.-++.|+|+|...+.+.+++++
T Consensus 28 k~~lVTGas~GIG~aia~~la~~ 50 (267)
T 3u5t_A 28 KVAIVTGASRGIGAAIAARLASD 50 (267)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC
Confidence 34578899999998888888876
No 73
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=25.94 E-value=62 Score=23.05 Aligned_cols=32 Identities=31% Similarity=0.482 Sum_probs=22.7
Q ss_pred HHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEE
Q 037531 39 LGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVV 74 (106)
Q Consensus 39 l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~ 74 (106)
|--+--++.|.|+|-..+.|++++++ |.+|++
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~----Ga~V~i 58 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAE----GARVFI 58 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHT----TCEEEE
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHC----CCEEEE
Confidence 43444577899999999888888875 345544
No 74
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=25.79 E-value=13 Score=25.35 Aligned_cols=43 Identities=12% Similarity=0.166 Sum_probs=28.6
Q ss_pred CceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCccccCh
Q 037531 44 GLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERYLSS 86 (106)
Q Consensus 44 Gi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY~s~ 86 (106)
.|++|.|++.+..-+.++.+.+...+..|-++++.++.+.++.
T Consensus 3 ~IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 3 KIALCITGASGVIYGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp EEEEEECSSTTHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred EEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 3667777765545566666666434678888888888775543
No 75
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=25.67 E-value=58 Score=22.84 Aligned_cols=28 Identities=21% Similarity=0.251 Sum_probs=22.0
Q ss_pred ceeeechHHHHHHHHHHHHHhCCCCCEEEEEe
Q 037531 45 LLVGISSGAAAAAAIKIAKRAENAGKLIVVIF 76 (106)
Q Consensus 45 i~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~ 76 (106)
++.|.|+|-..+.|++++++ |.+|++.-
T Consensus 15 lVTGas~GIG~aia~~la~~----Ga~V~~~~ 42 (261)
T 4h15_A 15 LITAGTKGAGAATVSLFLEL----GAQVLTTA 42 (261)
T ss_dssp EESCCSSHHHHHHHHHHHHT----TCEEEEEE
T ss_pred EEeccCcHHHHHHHHHHHHc----CCEEEEEE
Confidence 67799999999999999875 45665543
No 76
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=25.62 E-value=68 Score=21.79 Aligned_cols=21 Identities=29% Similarity=0.442 Sum_probs=15.8
Q ss_pred CceeeechHHHHHHHHHHHHH
Q 037531 44 GLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 44 Gi~~G~Ssga~l~aa~~~a~~ 64 (106)
-++.|+|+|...+.+.+++++
T Consensus 10 ~lVTGas~GIG~aia~~l~~~ 30 (250)
T 3nyw_A 10 AIITGASQGIGAVIAAGLATD 30 (250)
T ss_dssp EEEESTTSHHHHHHHHHHHHH
T ss_pred EEEECCCcHHHHHHHHHHHHC
Confidence 367788888888888777765
No 77
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=25.01 E-value=1.3e+02 Score=24.45 Aligned_cols=50 Identities=20% Similarity=0.248 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhCCCC-CEEEEEeCCCCcc
Q 037531 31 EAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAENAG-KLIVVIFPSSGER 82 (106)
Q Consensus 31 ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~-~~Vv~i~~D~g~k 82 (106)
+.++..|+...+.++++|.|+|.==..+..++.+.. + .++.++..|.|.+
T Consensus 229 ~~i~~Ir~~v~~~~vvv~lSGGvDSsVla~Ll~~al--G~~~V~aV~vd~g~~ 279 (697)
T 2vxo_A 229 ECIREIKERVGTSKVLVLLSGGVDSTVCTALLNRAL--NQEQVIAVHIDNGFM 279 (697)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSHHHHHHHHHHHHHS--CGGGEEEEEEECSCC
T ss_pred HHHHHHHHHhcccceEEEccCchHHHHHHHHHHHhc--CCceEEEEEeccccC
Confidence 344445554455789999999876555555665431 3 5788889898875
No 78
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=24.65 E-value=67 Score=21.60 Aligned_cols=21 Identities=29% Similarity=0.434 Sum_probs=16.9
Q ss_pred CceeeechHHHHHHHHHHHHH
Q 037531 44 GLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 44 Gi~~G~Ssga~l~aa~~~a~~ 64 (106)
-++.|.|+|...+.+.+++++
T Consensus 6 vlVTGas~GIG~a~a~~l~~~ 26 (235)
T 3l6e_A 6 IIVTGAGSGLGRALTIGLVER 26 (235)
T ss_dssp EEEESTTSHHHHHHHHHHHHT
T ss_pred EEEECCCCHHHHHHHHHHHHC
Confidence 367889999988888888865
No 79
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=24.31 E-value=63 Score=21.61 Aligned_cols=21 Identities=33% Similarity=0.479 Sum_probs=15.2
Q ss_pred CceeeechHHHHHHHHHHHHH
Q 037531 44 GLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 44 Gi~~G~Ssga~l~aa~~~a~~ 64 (106)
-++.|.|+|...+.+.+++++
T Consensus 10 vlITGas~gIG~~~a~~l~~~ 30 (255)
T 3icc_A 10 ALVTGASRGIGRAIAKRLAND 30 (255)
T ss_dssp EEETTCSSHHHHHHHHHHHHT
T ss_pred EEEECCCChHHHHHHHHHHHC
Confidence 356788888877777777764
No 80
>4gnr_A ABC transporter substrate-binding protein-branche amino acid transport; amino acid-binding protein, surface-exposed protein; HET: MLY; 1.00A {Streptococcus pneumoniae}
Probab=24.21 E-value=1.2e+02 Score=21.14 Aligned_cols=37 Identities=27% Similarity=0.325 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHHHhCc--eeeechHHHHHHHHHHHHH
Q 037531 28 TSNEAIQTAKLLGAKEGL--LVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 28 ~d~ea~~~~r~l~~~eGi--~~G~Ssga~l~aa~~~a~~ 64 (106)
+.+.+.+.+++|..+++. ++|+.+.....++...+++
T Consensus 59 ~p~~a~~~a~~li~~~~v~~i~g~~~s~~~~a~~~~~~~ 97 (353)
T 4gnr_A 59 ETAEAASVTTNLVTQSKVSAVVGPATSGATAAAVANATK 97 (353)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEECCCSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCceEEeccccCcccceehhhhhc
Confidence 568899999999988773 5576555555555666655
No 81
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=24.14 E-value=74 Score=21.63 Aligned_cols=21 Identities=24% Similarity=0.181 Sum_probs=17.3
Q ss_pred CceeeechHHHHHHHHHHHHH
Q 037531 44 GLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 44 Gi~~G~Ssga~l~aa~~~a~~ 64 (106)
-++.|.|+|...+.+.+++++
T Consensus 10 vlVTGas~GIG~aia~~l~~~ 30 (252)
T 3h7a_A 10 VAVIGAGDYIGAEIAKKFAAE 30 (252)
T ss_dssp EEEECCSSHHHHHHHHHHHHT
T ss_pred EEEECCCchHHHHHHHHHHHC
Confidence 467899999988888888875
No 82
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=24.01 E-value=23 Score=24.31 Aligned_cols=30 Identities=23% Similarity=0.383 Sum_probs=21.6
Q ss_pred HhCceeeechHHHHHHHHHHHHHhCCCCCEEEEE
Q 037531 42 KEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVI 75 (106)
Q Consensus 42 ~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i 75 (106)
+.-++.|.|+|...+.+.+++++ +.+|+++
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~----G~~V~~~ 38 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVRE----GATVAIA 38 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHT----TCEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHC----CCEEEEE
Confidence 34478899999999888888875 3455443
No 83
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=23.84 E-value=1.8e+02 Score=20.29 Aligned_cols=37 Identities=27% Similarity=0.308 Sum_probs=25.0
Q ss_pred CHHHHHHHHHHHHHHhCc--eeeechHHHHHHHHHHHHH
Q 037531 28 TSNEAIQTAKLLGAKEGL--LVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 28 ~d~ea~~~~r~l~~~eGi--~~G~Ssga~l~aa~~~a~~ 64 (106)
+.+.+.+.+++|..++++ ++|+.+.....++..++++
T Consensus 55 ~~~~a~~~~~~li~~~~v~~iiG~~~s~~~~a~~~~~~~ 93 (375)
T 3i09_A 55 KADIAASKAREWMDRGGLDLLVGGTNSATALSMNQVAAE 93 (375)
T ss_dssp CHHHHHHHHHHHHHHSCEEEEEECSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCCEEEECCCCcHHHHHHHHHHHH
Confidence 567888899999887774 5677544444455566654
No 84
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=23.83 E-value=1.8e+02 Score=19.98 Aligned_cols=54 Identities=17% Similarity=0.003 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHhCceeeechHHHHHHHHHHHHHhC--CCCCEEEEEeCCCCcc
Q 037531 29 SNEAIQTAKLLGAKEGLLVGISSGAAAAAAIKIAKRAE--NAGKLIVVIFPSSGER 82 (106)
Q Consensus 29 d~ea~~~~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~~--~~~~~Vv~i~~D~g~k 82 (106)
.++...+...|-.....--|...+.+|..+.+...... ....+++++++|+-..
T Consensus 86 ~~~l~~~i~~l~~~~~~~G~T~~~~aL~~a~~~l~~~~~r~~~~~~iillTDG~~~ 141 (281)
T 4hqf_A 86 KEKALIIIKSLLSTNLPYGKTSLTDALLQVRKHLNDRINRENANQLVVILTDGIPD 141 (281)
T ss_dssp HHHHHHHHHHHHHTTGGGCSCCHHHHHHHHHHHHHTSCCCTTCEEEEEEEESSCCS
T ss_pred HHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHhccCCCCCCEEEEEEecCCCC
Confidence 34556666666421001113333444444433333211 1135799999998655
No 85
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=23.74 E-value=1.4e+02 Score=18.62 Aligned_cols=32 Identities=9% Similarity=0.004 Sum_probs=18.7
Q ss_pred hHHHHHHHHHHHHHhC-CCCCEEEEEeCCCCcc
Q 037531 51 SGAAAAAAIKIAKRAE-NAGKLIVVIFPSSGER 82 (106)
Q Consensus 51 sga~l~aa~~~a~~~~-~~~~~Vv~i~~D~g~k 82 (106)
-+.++..+.+...... ....+++++++|+-..
T Consensus 84 ~~~al~~a~~~l~~~~~~~~~~~iiliTDG~~~ 116 (182)
T 1shu_X 84 IHEGLKLANEQIQKAGGLKTSSIIIALTDGKLD 116 (182)
T ss_dssp HHHHHHHHHHHHHHHTGGGSCEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHhccCCCCCeEEEEECCCCcC
Confidence 3445555554443321 2356899999998654
No 86
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=23.69 E-value=80 Score=21.60 Aligned_cols=21 Identities=10% Similarity=0.233 Sum_probs=14.4
Q ss_pred CceeeechHHHHHHHHHHHHH
Q 037531 44 GLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 44 Gi~~G~Ssga~l~aa~~~a~~ 64 (106)
-++.|+|+|...+.+.+++++
T Consensus 15 vlITGas~GIG~~~a~~L~~~ 35 (311)
T 3o26_A 15 AVVTGGNKGIGFEICKQLSSN 35 (311)
T ss_dssp EEESSCSSHHHHHHHHHHHHT
T ss_pred EEEecCCchHHHHHHHHHHHC
Confidence 356677777777777777654
No 87
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=23.45 E-value=70 Score=22.38 Aligned_cols=21 Identities=24% Similarity=0.531 Sum_probs=13.1
Q ss_pred CceeeechHHHHHHHHHHHHH
Q 037531 44 GLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 44 Gi~~G~Ssga~l~aa~~~a~~ 64 (106)
-++.|+|+|...+.+.+++++
T Consensus 31 ~lVTGas~GIG~aia~~la~~ 51 (299)
T 3t7c_A 31 AFITGAARGQGRSHAITLARE 51 (299)
T ss_dssp EEEESTTSHHHHHHHHHHHHT
T ss_pred EEEECCCCHHHHHHHHHHHHC
Confidence 355666666666666666653
No 88
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=23.34 E-value=68 Score=22.49 Aligned_cols=21 Identities=24% Similarity=0.449 Sum_probs=16.3
Q ss_pred CceeeechHHHHHHHHHHHHH
Q 037531 44 GLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 44 Gi~~G~Ssga~l~aa~~~a~~ 64 (106)
-++.|+|+|-..+.|++++++
T Consensus 10 alVTGas~GIG~aia~~la~~ 30 (258)
T 4gkb_A 10 VIVTGGASGIGGAISMRLAEE 30 (258)
T ss_dssp EEEETTTSHHHHHHHHHHHHT
T ss_pred EEEeCCCCHHHHHHHHHHHHc
Confidence 356788888888888888765
No 89
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=23.32 E-value=64 Score=21.40 Aligned_cols=21 Identities=29% Similarity=0.233 Sum_probs=17.7
Q ss_pred CceeeechHHHHHHHHHHHHH
Q 037531 44 GLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 44 Gi~~G~Ssga~l~aa~~~a~~ 64 (106)
-++.|+|+|...+.+.+++++
T Consensus 4 vlVTGas~gIG~~~a~~l~~~ 24 (230)
T 3guy_A 4 IVITGASSGLGAELAKLYDAE 24 (230)
T ss_dssp EEEESTTSHHHHHHHHHHHHT
T ss_pred EEEecCCchHHHHHHHHHHHC
Confidence 367899999999999888875
No 90
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=23.31 E-value=1.5e+02 Score=18.84 Aligned_cols=50 Identities=20% Similarity=0.155 Sum_probs=27.7
Q ss_pred CHHHHHHHHHHHHHHhC----ceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Q 037531 28 TSNEAIQTAKLLGAKEG----LLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSS 79 (106)
Q Consensus 28 ~d~ea~~~~r~l~~~eG----i~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~ 79 (106)
+-++..+....+.+..+ +++|.|-|+.++ +.++.+.+..-+.++++.+-.
T Consensus 73 ~~~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~~a--~~~a~~~p~~v~~~vl~~~~~ 126 (278)
T 3oos_A 73 SMTETIKDLEAIREALYINKWGFAGHSAGGMLA--LVYATEAQESLTKIIVGGAAA 126 (278)
T ss_dssp SHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHH--HHHHHHHGGGEEEEEEESCCS
T ss_pred cHHHHHHHHHHHHHHhCCCeEEEEeecccHHHH--HHHHHhCchhhCeEEEecCcc
Confidence 34455555666666666 689999999664 344444321123444444433
No 91
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=23.23 E-value=69 Score=22.45 Aligned_cols=28 Identities=39% Similarity=0.488 Sum_probs=21.8
Q ss_pred CceeeechHHHHHHHHHHHHHhCCCCCEEEEE
Q 037531 44 GLLVGISSGAAAAAAIKIAKRAENAGKLIVVI 75 (106)
Q Consensus 44 Gi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i 75 (106)
-++.|.|+|-..+.|++++++ +.+|++.
T Consensus 14 alVTGas~GIG~aia~~la~~----Ga~Vv~~ 41 (242)
T 4b79_A 14 VLVTGGSSGIGAAIAMQFAEL----GAEVVAL 41 (242)
T ss_dssp EEEETTTSHHHHHHHHHHHHT----TCEEEEE
T ss_pred EEEeCCCCHHHHHHHHHHHHC----CCEEEEE
Confidence 367899999999999999975 4455543
No 92
>1cxq_A Avian sarcoma virus integrase; mixed beta-sheet surrounded by alpha-helices, transferase; HET: EPE; 1.02A {Avian sarcoma virus} SCOP: c.55.3.2 PDB: 1cxu_A* 1czb_A* 1cz9_A* 1asu_A* 1asw_A* 1asv_A 1a5v_A* 1a5w_A* 1a5x_A* 1vsf_A* 1vse_A* 3o4n_A* 1vsm_A 3o4q_A* 1vsd_A* 1vsh_A* 1vsi_A* 1vsj_A* 1vsk_A 1vsl_A
Probab=23.10 E-value=1.1e+02 Score=18.95 Aligned_cols=25 Identities=20% Similarity=0.082 Sum_probs=18.2
Q ss_pred EEeCCCCccccChhhcHHHHHHHhcCc
Q 037531 74 VIFPSSGERYLSSEMFDAERQAAENMA 100 (106)
Q Consensus 74 ~i~~D~g~kY~s~~~~~~~~~~~~~~~ 100 (106)
+|.+|+|..|.+. .|.++ +...|+.
T Consensus 70 ~i~sDnG~~f~s~-~~~~~-~~~~gi~ 94 (162)
T 1cxq_A 70 AIKTDNGSCFTSK-STREW-LARWGIA 94 (162)
T ss_dssp EEECCSCHHHHSH-HHHHH-HHHHTCE
T ss_pred EEEeCCchhhhhH-HHHHH-HHHCCCe
Confidence 8899999999997 56554 3444553
No 93
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=23.08 E-value=1.9e+02 Score=19.85 Aligned_cols=35 Identities=14% Similarity=0.080 Sum_probs=19.4
Q ss_pred eechHHHHHHHHHHHHHh--CCCCCEEEEEeCCCCcc
Q 037531 48 GISSGAAAAAAIKIAKRA--ENAGKLIVVIFPSSGER 82 (106)
Q Consensus 48 G~Ssga~l~aa~~~a~~~--~~~~~~Vv~i~~D~g~k 82 (106)
|...+.+|..+.++.... .+...+++++++|+-..
T Consensus 102 ~T~~~~AL~~a~~~l~~~~~r~~~~~~iIllTDG~~~ 138 (266)
T 4hqo_A 102 TTSMTAALDEVQKHLNDRVNREKAIQLVILMTDGVPN 138 (266)
T ss_dssp CCCHHHHHHHHHHHHHTTCSCTTSEEEEEEEECSCCS
T ss_pred CCCHHHHHHHHHHHHhhccccCCCCeEEEEEccCCCC
Confidence 334455555554444332 11234799999998655
No 94
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=22.97 E-value=71 Score=21.83 Aligned_cols=22 Identities=27% Similarity=0.391 Sum_probs=16.2
Q ss_pred hCceeeechHHHHHHHHHHHHH
Q 037531 43 EGLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 43 eGi~~G~Ssga~l~aa~~~a~~ 64 (106)
.-++.|+|+|...+.+.+++++
T Consensus 12 ~vlVTGas~gIG~~ia~~l~~~ 33 (287)
T 3pxx_A 12 VVLVTGGARGQGRSHAVKLAEE 33 (287)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT
T ss_pred EEEEeCCCChHHHHHHHHHHHC
Confidence 3467788888888888777764
No 95
>4f11_A Gamma-aminobutyric acid type B receptor subunit 2; venus flytrap module, G-protein coupled receptor, signaling; 2.38A {Homo sapiens} PDB: 4f12_A*
Probab=22.92 E-value=1.8e+02 Score=20.99 Aligned_cols=39 Identities=3% Similarity=-0.122 Sum_probs=26.9
Q ss_pred eCHHHHHHHHHHHHHHh-Cc--eeeechHHHHHHHHHHHHHh
Q 037531 27 VTSNEAIQTAKLLGAKE-GL--LVGISSGAAAAAAIKIAKRA 65 (106)
Q Consensus 27 V~d~ea~~~~r~l~~~e-Gi--~~G~Ssga~l~aa~~~a~~~ 65 (106)
-+...++..+++|..++ ++ ++|+.+.....++..++++.
T Consensus 67 ~~~~~a~~~a~~li~~~~~v~aviG~~~S~~~~a~~~~~~~~ 108 (433)
T 4f11_A 67 CDNAKGLKAFYDAIKYGPNHLMVFGGVCPSVTSIIAESLQGW 108 (433)
T ss_dssp TCHHHHHHHHHHHHHHSCCCSEEEECCSHHHHHHHHHTHHHH
T ss_pred CCHHHHHHHHHHHHhcCCceEEEECCCcchHHHHHHHHHHhc
Confidence 36688999999998763 65 77876555555666666553
No 96
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=22.81 E-value=1.5e+02 Score=18.74 Aligned_cols=34 Identities=21% Similarity=0.135 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHhC----ceeeechHHHHHHHHHHHHHh
Q 037531 30 NEAIQTAKLLGAKEG----LLVGISSGAAAAAAIKIAKRA 65 (106)
Q Consensus 30 ~ea~~~~r~l~~~eG----i~~G~Ssga~l~aa~~~a~~~ 65 (106)
++..+.+..+.+..+ +++|.|-|+.++ +.++.+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~GhS~Gg~~a--~~~a~~~ 111 (269)
T 4dnp_A 74 DPYVDDLLHILDALGIDCCAYVGHSVSAMIG--ILASIRR 111 (269)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEETHHHHHH--HHHHHHC
T ss_pred HHHHHHHHHHHHhcCCCeEEEEccCHHHHHH--HHHHHhC
Confidence 445555666666655 689999999763 4455554
No 97
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=22.57 E-value=81 Score=21.31 Aligned_cols=26 Identities=15% Similarity=0.247 Sum_probs=19.5
Q ss_pred HHHHhCceeeechHHHHHHHHHHHHH
Q 037531 39 LGAKEGLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 39 l~~~eGi~~G~Ssga~l~aa~~~a~~ 64 (106)
|..+.-++.|.|+|...+.+.+++++
T Consensus 7 l~~k~vlVTGas~gIG~aia~~l~~~ 32 (257)
T 3tl3_A 7 IRDAVAVVTGGASGLGLATTKRLLDA 32 (257)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHH
T ss_pred ecCCEEEEeCCCCHHHHHHHHHHHHC
Confidence 33445578899999999999999876
No 98
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=22.55 E-value=76 Score=21.77 Aligned_cols=23 Identities=22% Similarity=0.491 Sum_probs=16.4
Q ss_pred HhCceeeechHHHHHHHHHHHHH
Q 037531 42 KEGLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 42 ~eGi~~G~Ssga~l~aa~~~a~~ 64 (106)
+.-++.|.|+|...+.+.+++++
T Consensus 12 k~~lVTGas~GIG~a~a~~la~~ 34 (277)
T 3tsc_A 12 RVAFITGAARGQGRAHAVRMAAE 34 (277)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT
T ss_pred CEEEEECCccHHHHHHHHHHHHc
Confidence 33467788888888777777764
No 99
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Probab=22.39 E-value=1.6e+02 Score=18.97 Aligned_cols=48 Identities=19% Similarity=0.034 Sum_probs=28.1
Q ss_pred CHHHHHHHHHHHHHHhCc-----eeeechHHHHHHHHHHHHHhCCCCCEEEEEeC
Q 037531 28 TSNEAIQTAKLLGAKEGL-----LVGISSGAAAAAAIKIAKRAENAGKLIVVIFP 77 (106)
Q Consensus 28 ~d~ea~~~~r~l~~~eGi-----~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~ 77 (106)
+-++..+.+..+.+..++ ++|.|-|+.++ +.++.+.+..-+.+|++.+
T Consensus 80 ~~~~~~~~~~~~l~~~~~~~~~~lvG~S~Gg~~a--~~~a~~~p~~v~~lvl~~~ 132 (297)
T 2qvb_A 80 SYGEQRDFLFALWDALDLGDHVVLVLHDWGSALG--FDWANQHRDRVQGIAFMEA 132 (297)
T ss_dssp CHHHHHHHHHHHHHHTTCCSCEEEEEEEHHHHHH--HHHHHHSGGGEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCceEEEEeCchHHHH--HHHHHhChHhhheeeEecc
Confidence 445556666666666664 89999998654 3445443211234555554
No 100
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=22.36 E-value=26 Score=24.46 Aligned_cols=27 Identities=30% Similarity=0.361 Sum_probs=19.2
Q ss_pred HHHHHhCceeeechHHHHHHHHHHHHH
Q 037531 38 LLGAKEGLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 38 ~l~~~eGi~~G~Ssga~l~aa~~~a~~ 64 (106)
.|..+.-++.|+|+|...+.+.+++++
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la~~ 48 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLAKA 48 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHT
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHC
Confidence 343444577888888888888888764
No 101
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=22.29 E-value=79 Score=21.40 Aligned_cols=21 Identities=33% Similarity=0.406 Sum_probs=14.4
Q ss_pred CceeeechHHHHHHHHHHHHH
Q 037531 44 GLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 44 Gi~~G~Ssga~l~aa~~~a~~ 64 (106)
-++.|+|+|...+.+.+++++
T Consensus 15 vlVTGas~gIG~aia~~l~~~ 35 (252)
T 3f1l_A 15 ILVTGASDGIGREAAMTYARY 35 (252)
T ss_dssp EEEESTTSHHHHHHHHHHHHT
T ss_pred EEEeCCCChHHHHHHHHHHHC
Confidence 356677777777777777654
No 102
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=22.13 E-value=89 Score=22.55 Aligned_cols=34 Identities=18% Similarity=0.245 Sum_probs=19.3
Q ss_pred eeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCC
Q 037531 46 LVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSG 80 (106)
Q Consensus 46 ~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g 80 (106)
..|+|+|+.+ -++-+++.+..++..|.++.+.+|
T Consensus 8 ~~GGTgGHi~-palala~~L~~~g~~V~~vg~~~g 41 (365)
T 3s2u_A 8 MAGGTGGHVF-PALACAREFQARGYAVHWLGTPRG 41 (365)
T ss_dssp ECCSSHHHHH-HHHHHHHHHHHTTCEEEEEECSSS
T ss_pred EcCCCHHHHH-HHHHHHHHHHhCCCEEEEEECCch
Confidence 3466777743 444455544334667777765554
No 103
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=22.11 E-value=2.1e+02 Score=20.07 Aligned_cols=37 Identities=16% Similarity=0.278 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHHHHhCc--eeeechHHHHHHHHHHHHH
Q 037531 28 TSNEAIQTAKLLGAKEGL--LVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 28 ~d~ea~~~~r~l~~~eGi--~~G~Ssga~l~aa~~~a~~ 64 (106)
+.+.+.+.+++|..++++ ++|+.+.....++..++++
T Consensus 57 ~~~~a~~~~~~li~~~~v~~iiG~~~s~~~~a~~~~~~~ 95 (379)
T 3n0w_A 57 KTDVALSIAREWFDRDGVDAIFDVVNSGTALAINNLVKD 95 (379)
T ss_dssp CHHHHHHHHHHHHHHSCCCEEEECCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCceEEEcCCCcHHHHHHHHHHHH
Confidence 467788899999886774 6676555544555566654
No 104
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=21.99 E-value=80 Score=21.33 Aligned_cols=29 Identities=28% Similarity=0.366 Sum_probs=21.9
Q ss_pred hCceeeechHHHHHHHHHHHHHhCCCCCEEEEE
Q 037531 43 EGLLVGISSGAAAAAAIKIAKRAENAGKLIVVI 75 (106)
Q Consensus 43 eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i 75 (106)
.-++.|+|+|...+.+.+++++ +.+|+++
T Consensus 9 ~~lVTGas~gIG~aia~~l~~~----G~~V~~~ 37 (257)
T 3tpc_A 9 VFIVTGASSGLGAAVTRMLAQE----GATVLGL 37 (257)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT----TCEEEEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHC----CCEEEEE
Confidence 3478899999999999999875 3455444
No 105
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=21.98 E-value=79 Score=21.75 Aligned_cols=30 Identities=23% Similarity=0.520 Sum_probs=20.6
Q ss_pred HhCceeeechHHHHHHHHHHHHHhCCCCCEEEEE
Q 037531 42 KEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVI 75 (106)
Q Consensus 42 ~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i 75 (106)
+.-++.|.|+|...+.+.+++++ +.+|+++
T Consensus 12 k~~lVTGas~gIG~aia~~la~~----G~~V~~~ 41 (286)
T 3uve_A 12 KVAFVTGAARGQGRSHAVRLAQE----GADIIAV 41 (286)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT----TCEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHC----CCeEEEE
Confidence 34467888888888888888764 3455443
No 106
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=21.96 E-value=1.7e+02 Score=18.86 Aligned_cols=45 Identities=24% Similarity=0.225 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHH----hCceeeechHHHHHHHHHHHHHhCCCCCEEEEEe
Q 037531 30 NEAIQTAKLLGAK----EGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIF 76 (106)
Q Consensus 30 ~ea~~~~r~l~~~----eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~ 76 (106)
++..+.+..+..+ .=+++|.|-|+.++ ..++.+.+..-+.++++.
T Consensus 98 ~d~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a--~~~a~~~p~~v~~lvl~~ 146 (303)
T 3pe6_A 98 RDVLQHVDSMQKDYPGLPVFLLGHSMGGAIA--ILTAAERPGHFAGMVLIS 146 (303)
T ss_dssp HHHHHHHHHHHHHSTTCCEEEEEETHHHHHH--HHHHHHSTTTCSEEEEES
T ss_pred HHHHHHHHHHhhccCCceEEEEEeCHHHHHH--HHHHHhCcccccEEEEEC
Confidence 3444445555444 23689999998663 445544422234555543
No 107
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=21.78 E-value=1.7e+02 Score=19.03 Aligned_cols=63 Identities=11% Similarity=0.014 Sum_probs=34.2
Q ss_pred ccCeEEEeCHHHHHHHHHHHHHHhC--c------eee-echHHHHHHHHHHHHHhCC--CCCEEEEEeCCCCcc
Q 037531 20 ILDEVVRVTSNEAIQTAKLLGAKEG--L------LVG-ISSGAAAAAAIKIAKRAEN--AGKLIVVIFPSSGER 82 (106)
Q Consensus 20 ~vD~~i~V~d~ea~~~~r~l~~~eG--i------~~G-~Ssga~l~aa~~~a~~~~~--~~~~Vv~i~~D~g~k 82 (106)
.+++++-|+..+.....+.++++.| + ..| .....++..+++..++... ....++++.||...-
T Consensus 46 ~~~~i~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~ 119 (236)
T 2vsh_A 46 SIEKIVVGVHGDWVSHAEDLVDKYLPLYKERIIITKGGADRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFI 119 (236)
T ss_dssp TCCCEEEEECGGGHHHHHHHHHHHCGGGGGGEEEEECCSSHHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTC
T ss_pred CCCeEEEEeCHHHHHHHHHHHHhccccccCceEEECCCCchHHHHHHHHHHHHhhccCCCCCEEEEecCCcccC
Confidence 3788887766554334445555556 2 122 2345556666665543211 124677777887654
No 108
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=21.78 E-value=77 Score=21.70 Aligned_cols=24 Identities=13% Similarity=0.260 Sum_probs=18.1
Q ss_pred HHhCceeeechHHHHHHHHHHHHH
Q 037531 41 AKEGLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 41 ~~eGi~~G~Ssga~l~aa~~~a~~ 64 (106)
.+.-++.|+|+|...+.+.+++++
T Consensus 30 ~k~vlVTGas~GIG~aia~~l~~~ 53 (281)
T 3ppi_A 30 GASAIVSGGAGGLGEATVRRLHAD 53 (281)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHT
T ss_pred CCEEEEECCCChHHHHHHHHHHHC
Confidence 344577888888888888888764
No 109
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=21.70 E-value=77 Score=22.25 Aligned_cols=20 Identities=35% Similarity=0.424 Sum_probs=12.0
Q ss_pred ceeeechHHHHHHHHHHHHH
Q 037531 45 LLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 45 i~~G~Ssga~l~aa~~~a~~ 64 (106)
++.|+|+|-..+.|++++++
T Consensus 11 lVTGas~GIG~aiA~~la~~ 30 (254)
T 4fn4_A 11 IVTGAGSGIGRAIAKKFALN 30 (254)
T ss_dssp EEETTTSHHHHHHHHHHHHT
T ss_pred EEeCCCCHHHHHHHHHHHHc
Confidence 45566666666666666543
No 110
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=21.61 E-value=1.1e+02 Score=23.47 Aligned_cols=30 Identities=33% Similarity=0.351 Sum_probs=23.8
Q ss_pred ceeeechHHHHHHHHHHHH-HhCCCCCEEEEEeCC
Q 037531 45 LLVGISSGAAAAAAIKIAK-RAENAGKLIVVIFPS 78 (106)
Q Consensus 45 i~~G~Ssga~l~aa~~~a~-~~~~~~~~Vv~i~~D 78 (106)
++.|.|+|-..+.|+.+++ + |.+|+++.-+
T Consensus 65 LVTGASsGIG~AiA~~LA~~~----GA~Vv~~~r~ 95 (422)
T 3s8m_A 65 LVIGASSGYGLASRITAAFGF----GADTLGVFFE 95 (422)
T ss_dssp EEESCSSHHHHHHHHHHHHHH----CCEEEEEECC
T ss_pred EEECCChHHHHHHHHHHHHhC----CCEEEEEeCC
Confidence 6789999999999999998 5 4566665443
No 111
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=21.60 E-value=72 Score=22.05 Aligned_cols=20 Identities=25% Similarity=0.391 Sum_probs=13.2
Q ss_pred ceeeechHHHHHHHHHHHHH
Q 037531 45 LLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 45 i~~G~Ssga~l~aa~~~a~~ 64 (106)
++.|.|+|...+.+.+++++
T Consensus 8 lVTGas~GIG~aia~~la~~ 27 (264)
T 3tfo_A 8 LITGASGGIGEGIARELGVA 27 (264)
T ss_dssp EESSTTSHHHHHHHHHHHHT
T ss_pred EEeCCccHHHHHHHHHHHHC
Confidence 56677777777666666654
No 112
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=21.60 E-value=79 Score=21.54 Aligned_cols=29 Identities=24% Similarity=0.375 Sum_probs=19.8
Q ss_pred hCceeeechHHHHHHHHHHHHHhCCCCCEEEEE
Q 037531 43 EGLLVGISSGAAAAAAIKIAKRAENAGKLIVVI 75 (106)
Q Consensus 43 eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i 75 (106)
.-++.|+|+|...+.+.+++++ +.+|+++
T Consensus 10 ~vlVTGas~GIG~aia~~la~~----G~~V~~~ 38 (259)
T 3edm_A 10 TIVVAGAGRDIGRACAIRFAQE----GANVVLT 38 (259)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT----TCEEEEE
T ss_pred EEEEECCCchHHHHHHHHHHHC----CCEEEEE
Confidence 3467788888888888888764 3455444
No 113
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=21.48 E-value=86 Score=21.79 Aligned_cols=23 Identities=30% Similarity=0.453 Sum_probs=17.4
Q ss_pred HhCceeeechHHHHHHHHHHHHH
Q 037531 42 KEGLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 42 ~eGi~~G~Ssga~l~aa~~~a~~ 64 (106)
+.-++.|+|+|...+.+.+++++
T Consensus 29 k~~lVTGas~GIG~aia~~la~~ 51 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAAD 51 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHHC
Confidence 33477888888888888888764
No 114
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=21.43 E-value=99 Score=21.34 Aligned_cols=37 Identities=16% Similarity=0.189 Sum_probs=25.5
Q ss_pred CceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCcc
Q 037531 44 GLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGER 82 (106)
Q Consensus 44 Gi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~k 82 (106)
++++.++ |.|+.+.++..+... -...|+.++||..+-
T Consensus 6 avl~Sg~-Gsnl~ali~~~~~~~-l~~eI~~Visn~~~a 42 (211)
T 3p9x_A 6 AIFASGS-GTNAEAIIQSQKAGQ-LPCEVALLITDKPGA 42 (211)
T ss_dssp EEECCTT-CHHHHHHHHHHHTTC-CSSEEEEEEESCSSS
T ss_pred EEEEeCC-chHHHHHHHHHHcCC-CCcEEEEEEECCCCc
Confidence 4555554 789988888766542 235899999997554
No 115
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=21.42 E-value=1.1e+02 Score=21.35 Aligned_cols=30 Identities=30% Similarity=0.405 Sum_probs=22.7
Q ss_pred HHHHHHHhCceeeechHHHHHHHHHHHHHh
Q 037531 36 AKLLGAKEGLLVGISSGAAAAAAIKIAKRA 65 (106)
Q Consensus 36 ~r~l~~~eGi~~G~Ssga~l~aa~~~a~~~ 65 (106)
+..|..+.-++.|.|+|...+.+.+++++.
T Consensus 28 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G 57 (287)
T 3rku_A 28 AERLAKKTVLITGASAGIGKATALEYLEAS 57 (287)
T ss_dssp HHHHTTCEEEEESTTSHHHHHHHHHHHHHH
T ss_pred hhhcCCCEEEEecCCChHHHHHHHHHHHcC
Confidence 445655666888999999888888888764
No 116
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=21.35 E-value=84 Score=21.42 Aligned_cols=20 Identities=25% Similarity=0.263 Sum_probs=12.5
Q ss_pred ceeeechHHHHHHHHHHHHH
Q 037531 45 LLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 45 i~~G~Ssga~l~aa~~~a~~ 64 (106)
++.|.|+|...+.+.+++++
T Consensus 12 lVTGas~GIG~aia~~l~~~ 31 (265)
T 3lf2_A 12 VVTGGSSGIGLATVELLLEA 31 (265)
T ss_dssp EEETCSSHHHHHHHHHHHHT
T ss_pred EEeCCCChHHHHHHHHHHHC
Confidence 55666666666666666653
No 117
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=21.16 E-value=1.3e+02 Score=20.92 Aligned_cols=31 Identities=19% Similarity=0.350 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHhC------ceeeechHHHHHHHHHH
Q 037531 30 NEAIQTAKLLGAKEG------LLVGISSGAAAAAAIKI 61 (106)
Q Consensus 30 ~ea~~~~r~l~~~eG------i~~G~Ssga~l~aa~~~ 61 (106)
+|+.++.+.+.++ | .++|.|.|++++...-.
T Consensus 132 ~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~ 168 (322)
T 3fak_A 132 EDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLV 168 (322)
T ss_dssp HHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHH
Confidence 6778888888766 4 58889999988765433
No 118
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=21.10 E-value=85 Score=21.70 Aligned_cols=21 Identities=24% Similarity=0.308 Sum_probs=16.6
Q ss_pred CceeeechHHHHHHHHHHHHH
Q 037531 44 GLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 44 Gi~~G~Ssga~l~aa~~~a~~ 64 (106)
-++.|.|+|...+.+.+++++
T Consensus 8 ~lVTGas~GIG~aia~~la~~ 28 (281)
T 3zv4_A 8 ALITGGASGLGRALVDRFVAE 28 (281)
T ss_dssp EEEETCSSHHHHHHHHHHHHT
T ss_pred EEEECCCcHHHHHHHHHHHHC
Confidence 467788888888888888765
No 119
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=21.10 E-value=85 Score=21.56 Aligned_cols=23 Identities=17% Similarity=0.476 Sum_probs=16.9
Q ss_pred HhCceeeechHHHHHHHHHHHHH
Q 037531 42 KEGLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 42 ~eGi~~G~Ssga~l~aa~~~a~~ 64 (106)
+.-++.|.|+|...+.+.+++++
T Consensus 16 k~~lVTGas~gIG~a~a~~la~~ 38 (280)
T 3pgx_A 16 RVAFITGAARGQGRSHAVRLAAE 38 (280)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT
T ss_pred CEEEEECCCcHHHHHHHHHHHHC
Confidence 33467788888888888887764
No 120
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=21.08 E-value=1.1e+02 Score=20.09 Aligned_cols=20 Identities=30% Similarity=0.459 Sum_probs=14.7
Q ss_pred ceeeechHHHHHHHHHHHHH
Q 037531 45 LLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 45 i~~G~Ssga~l~aa~~~a~~ 64 (106)
++.|+|+|...+.+.+++++
T Consensus 6 lITGas~gIG~~ia~~l~~~ 25 (235)
T 3l77_A 6 VITGASRGIGEAIARALARD 25 (235)
T ss_dssp EEESCSSHHHHHHHHHHHHT
T ss_pred EEECCCcHHHHHHHHHHHHC
Confidence 56788888877777777764
No 121
>3n0x_A Possible substrate binding protein of ABC transpo system; receptor family ligand binding region, structural genomics; HET: MSE; 1.50A {Rhodopseudomonas palustris} PDB: 3nnd_B
Probab=20.98 E-value=1.7e+02 Score=20.61 Aligned_cols=38 Identities=24% Similarity=0.247 Sum_probs=27.4
Q ss_pred CHHHHHHHHHHHHHHhCc--eeeechHHHHHHHHHHHHHh
Q 037531 28 TSNEAIQTAKLLGAKEGL--LVGISSGAAAAAAIKIAKRA 65 (106)
Q Consensus 28 ~d~ea~~~~r~l~~~eGi--~~G~Ssga~l~aa~~~a~~~ 65 (106)
+.+.+...+++|..++++ ++|+.+.....++..++++.
T Consensus 57 ~~~~a~~~~~~li~~~~v~aiiG~~~s~~~~a~~~~~~~~ 96 (374)
T 3n0x_A 57 KPDLSKAALAEAYQDDGADIAIGTSSSAAALADLPVAEEN 96 (374)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEECSSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCceEEEcCCCcHHHHHHHHHHHHc
Confidence 568899999999887664 67876666555666666653
No 122
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=20.93 E-value=1.5e+02 Score=18.72 Aligned_cols=43 Identities=7% Similarity=-0.003 Sum_probs=23.5
Q ss_pred CceeeechHHHHHHHHHHHHHhCCCCCEEEEEeCCCCccccChhhcHHHH
Q 037531 44 GLLVGISSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERYLSSEMFDAER 93 (106)
Q Consensus 44 Gi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY~s~~~~~~~~ 93 (106)
-++.|+++-+.+.+.++...+. +..|.++ |.|..+..+|.+++
T Consensus 27 llIaGG~GItPl~sm~~~l~~~---~~~v~l~----g~r~~~d~~~~~el 69 (158)
T 3lrx_A 27 LAIGAYTGIVEVYPIAKAWQEI---GNDVTTL----HVTFEPMVILKEEL 69 (158)
T ss_dssp EEEEETTHHHHHHHHHHHHHHH---TCEEEEE----EECBGGGCCSHHHH
T ss_pred EEEEccCcHHHHHHHHHHHHhc---CCcEEEE----EeCCHHHhhHHHHH
Confidence 3566777777777766655442 2344433 34444444565544
No 123
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=20.91 E-value=85 Score=21.66 Aligned_cols=23 Identities=35% Similarity=0.537 Sum_probs=17.6
Q ss_pred HhCceeeechHHHHHHHHHHHHH
Q 037531 42 KEGLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 42 ~eGi~~G~Ssga~l~aa~~~a~~ 64 (106)
+.-++.|+|+|...+.+.+++++
T Consensus 25 k~~lVTGas~GIG~aia~~la~~ 47 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAAR 47 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC
Confidence 34577888888888888888764
No 124
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=20.88 E-value=88 Score=21.07 Aligned_cols=27 Identities=15% Similarity=0.350 Sum_probs=20.2
Q ss_pred ceeeechHHHHHHHHHHHHHhCCCCCEEEEE
Q 037531 45 LLVGISSGAAAAAAIKIAKRAENAGKLIVVI 75 (106)
Q Consensus 45 i~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i 75 (106)
++.|+|+|...+.+.+++++ +.+|+++
T Consensus 6 lVTGas~gIG~~ia~~l~~~----G~~V~~~ 32 (247)
T 3dii_A 6 IVTGGGHGIGKQICLDFLEA----GDKVCFI 32 (247)
T ss_dssp EEESTTSHHHHHHHHHHHHT----TCEEEEE
T ss_pred EEECCCCHHHHHHHHHHHHC----CCEEEEE
Confidence 67899999999888888875 3455544
No 125
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=20.85 E-value=1.6e+02 Score=18.65 Aligned_cols=14 Identities=7% Similarity=0.014 Sum_probs=10.7
Q ss_pred CCEEEEEeCCCCcc
Q 037531 69 GKLIVVIFPSSGER 82 (106)
Q Consensus 69 ~~~Vv~i~~D~g~k 82 (106)
..+++++++|+-..
T Consensus 122 ~~~~iillTDG~~~ 135 (178)
T 2xgg_A 122 VPKLVIGMTDGESD 135 (178)
T ss_dssp SCEEEEEEESSCCC
T ss_pred CCEEEEEEcCCCCC
Confidence 35899999997544
No 126
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=20.82 E-value=87 Score=21.39 Aligned_cols=22 Identities=23% Similarity=0.466 Sum_probs=16.2
Q ss_pred hCceeeechHHHHHHHHHHHHH
Q 037531 43 EGLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 43 eGi~~G~Ssga~l~aa~~~a~~ 64 (106)
.-++.|+|+|...+.+.+++++
T Consensus 15 ~vlVTGas~gIG~~ia~~l~~~ 36 (278)
T 3sx2_A 15 VAFITGAARGQGRAHAVRLAAD 36 (278)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHHC
Confidence 3467788888888888777764
No 127
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=20.81 E-value=83 Score=21.58 Aligned_cols=23 Identities=26% Similarity=0.442 Sum_probs=17.3
Q ss_pred HhCceeeechHHHHHHHHHHHHH
Q 037531 42 KEGLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 42 ~eGi~~G~Ssga~l~aa~~~a~~ 64 (106)
+.-++.|.|+|...+.+.+++++
T Consensus 11 k~~lVTGas~gIG~a~a~~l~~~ 33 (281)
T 3s55_A 11 KTALITGGARGMGRSHAVALAEA 33 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT
T ss_pred CEEEEeCCCchHHHHHHHHHHHC
Confidence 34467888888888888888764
No 128
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=20.78 E-value=93 Score=21.49 Aligned_cols=22 Identities=32% Similarity=0.499 Sum_probs=17.6
Q ss_pred hCceeeechHHHHHHHHHHHHH
Q 037531 43 EGLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 43 eGi~~G~Ssga~l~aa~~~a~~ 64 (106)
.-++.|+|+|...+.+.+++++
T Consensus 18 ~vlVTGas~gIG~~~a~~L~~~ 39 (291)
T 3rd5_A 18 TVVITGANSGLGAVTARELARR 39 (291)
T ss_dssp EEEEECCSSHHHHHHHHHHHHT
T ss_pred EEEEeCCCChHHHHHHHHHHHC
Confidence 3467899999998888888865
No 129
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=20.66 E-value=94 Score=20.91 Aligned_cols=21 Identities=38% Similarity=0.502 Sum_probs=14.9
Q ss_pred CceeeechHHHHHHHHHHHHH
Q 037531 44 GLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 44 Gi~~G~Ssga~l~aa~~~a~~ 64 (106)
-++.|.|+|...+.+.+++++
T Consensus 10 ~lVTGas~gIG~aia~~l~~~ 30 (247)
T 2jah_A 10 ALITGASSGIGEATARALAAE 30 (247)
T ss_dssp EEEESCSSHHHHHHHHHHHHT
T ss_pred EEEECCCCHHHHHHHHHHHHC
Confidence 466777777777777777664
No 130
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=20.64 E-value=2.3e+02 Score=20.35 Aligned_cols=48 Identities=13% Similarity=0.022 Sum_probs=32.0
Q ss_pred CHHHHHHHHHHHHHHh----CceeeechHHHHHHHHHHHHHhCCCCCEEEEEe
Q 037531 28 TSNEAIQTAKLLGAKE----GLLVGISSGAAAAAAIKIAKRAENAGKLIVVIF 76 (106)
Q Consensus 28 ~d~ea~~~~r~l~~~e----Gi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~ 76 (106)
+++...+.++.|++.. .++.+.|+..++..+++++.... .+..|++.-
T Consensus 90 ~~~~~~~la~~l~~~~~~~~~v~~~~ggsea~~~al~~a~~~~-~~~~vi~~~ 141 (427)
T 3fq8_A 90 PCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRIMRAYT-GRDKIIKFE 141 (427)
T ss_dssp CCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHH-CCCEEEEEE
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhh-CCCEEEEEC
Confidence 4555666666777654 47888888888889998886553 234555443
No 131
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=20.63 E-value=95 Score=21.06 Aligned_cols=20 Identities=30% Similarity=0.400 Sum_probs=11.9
Q ss_pred ceeeechHHHHHHHHHHHHH
Q 037531 45 LLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 45 i~~G~Ssga~l~aa~~~a~~ 64 (106)
++.|.|+|...+.+.+++++
T Consensus 16 lVTGas~gIG~~ia~~l~~~ 35 (256)
T 3gaf_A 16 IVTGAAAGIGRAIAGTFAKA 35 (256)
T ss_dssp EECSCSSHHHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHHC
Confidence 45566666666666666554
No 132
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=20.62 E-value=80 Score=20.99 Aligned_cols=21 Identities=38% Similarity=0.366 Sum_probs=13.6
Q ss_pred CceeeechHHHHHHHHHHHHH
Q 037531 44 GLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 44 Gi~~G~Ssga~l~aa~~~a~~ 64 (106)
-++.|+|+|...+.+.+++++
T Consensus 17 vlITGas~gIG~~ia~~l~~~ 37 (247)
T 3i1j_A 17 ILVTGAARGIGAAAARAYAAH 37 (247)
T ss_dssp EEESSTTSHHHHHHHHHHHHT
T ss_pred EEEeCCCChHHHHHHHHHHHC
Confidence 356677777776666666653
No 133
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=20.55 E-value=84 Score=21.70 Aligned_cols=21 Identities=29% Similarity=0.362 Sum_probs=15.2
Q ss_pred CceeeechHHHHHHHHHHHHH
Q 037531 44 GLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 44 Gi~~G~Ssga~l~aa~~~a~~ 64 (106)
-++.|+|+|...+.+.+++++
T Consensus 34 ~lVTGas~GIG~aia~~la~~ 54 (273)
T 3uf0_A 34 AVVTGAGSGIGRAIAHGYARA 54 (273)
T ss_dssp EEEETTTSHHHHHHHHHHHHT
T ss_pred EEEeCCCcHHHHHHHHHHHHC
Confidence 466788888777777777764
No 134
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=20.52 E-value=86 Score=21.08 Aligned_cols=21 Identities=33% Similarity=0.460 Sum_probs=16.0
Q ss_pred CceeeechHHHHHHHHHHHHH
Q 037531 44 GLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 44 Gi~~G~Ssga~l~aa~~~a~~ 64 (106)
-++.|.|+|...+.+.+++++
T Consensus 12 vlITGas~gIG~~~a~~l~~~ 32 (261)
T 3n74_A 12 ALITGAGSGFGEGMAKRFAKG 32 (261)
T ss_dssp EEEETTTSHHHHHHHHHHHHT
T ss_pred EEEECCCchHHHHHHHHHHHC
Confidence 467788888888888887764
No 135
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=20.51 E-value=90 Score=21.21 Aligned_cols=23 Identities=17% Similarity=0.403 Sum_probs=18.3
Q ss_pred HhCceeeechHHHHHHHHHHHHH
Q 037531 42 KEGLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 42 ~eGi~~G~Ssga~l~aa~~~a~~ 64 (106)
+.-++.|.|+|...+.+.+++++
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~ 31 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEG 31 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHHC
Confidence 34477899999999888888875
No 136
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=20.37 E-value=1.7e+02 Score=18.49 Aligned_cols=35 Identities=31% Similarity=0.191 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHhC----ceeeechHHHHHHHHHHHHHh
Q 037531 29 SNEAIQTAKLLGAKEG----LLVGISSGAAAAAAIKIAKRA 65 (106)
Q Consensus 29 d~ea~~~~r~l~~~eG----i~~G~Ssga~l~aa~~~a~~~ 65 (106)
-++..+.+..+.+..+ +++|.|-|+.++ +.++.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a--~~~a~~~ 116 (286)
T 3qit_A 78 SLTFLAQIDRVIQELPDQPLLLVGHSMGAMLA--TAIASVR 116 (286)
T ss_dssp HHHHHHHHHHHHHHSCSSCEEEEEETHHHHHH--HHHHHHC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEeCHHHHHH--HHHHHhC
Confidence 3455555666666655 699999999664 4455443
No 137
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=20.34 E-value=82 Score=22.29 Aligned_cols=34 Identities=29% Similarity=0.481 Sum_probs=24.6
Q ss_pred HHHHHhCceeeechHHHHHHHHHHHHHhCCCCCEEEEE
Q 037531 38 LLGAKEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVI 75 (106)
Q Consensus 38 ~l~~~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i 75 (106)
.|..+.-++.|+|+|...+.+.+++++ +.+|+++
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~----G~~Vv~~ 76 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQD----GADIVAI 76 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHT----TCEEEEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHC----CCeEEEE
Confidence 343344578899999999999999875 4466554
No 138
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=20.30 E-value=73 Score=22.43 Aligned_cols=27 Identities=30% Similarity=0.482 Sum_probs=18.8
Q ss_pred ceeeechHHHHHHHHHHHHHhCCCCCEEEEE
Q 037531 45 LLVGISSGAAAAAAIKIAKRAENAGKLIVVI 75 (106)
Q Consensus 45 i~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i 75 (106)
++.|+|+|-..+.|++++++ |.+|++.
T Consensus 13 lVTGas~GIG~aiA~~la~~----Ga~Vvi~ 39 (247)
T 4hp8_A 13 LVTGANTGLGQAIAVGLAAA----GAEVVCA 39 (247)
T ss_dssp EETTTTSHHHHHHHHHHHHT----TCEEEEE
T ss_pred EEeCcCCHHHHHHHHHHHHc----CCEEEEE
Confidence 56688888888888888764 3455443
No 139
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=20.21 E-value=88 Score=21.10 Aligned_cols=22 Identities=27% Similarity=0.450 Sum_probs=17.6
Q ss_pred hCceeeechHHHHHHHHHHHHH
Q 037531 43 EGLLVGISSGAAAAAAIKIAKR 64 (106)
Q Consensus 43 eGi~~G~Ssga~l~aa~~~a~~ 64 (106)
.-++.|.|+|...+.+.+++++
T Consensus 8 ~vlVTGas~gIG~a~a~~l~~~ 29 (247)
T 3rwb_A 8 TALVTGAAQGIGKAIAARLAAD 29 (247)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT
T ss_pred EEEEECCCCHHHHHHHHHHHHC
Confidence 3467899999998888888875
No 140
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=20.19 E-value=1.9e+02 Score=21.57 Aligned_cols=57 Identities=12% Similarity=0.115 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHHHHhCcee-------ee-------chHHHHHHHHHHHHHhCCCCCEEEEEeCCCCcccc
Q 037531 28 TSNEAIQTAKLLGAKEGLLV-------GI-------SSGAAAAAAIKIAKRAENAGKLIVVIFPSSGERYL 84 (106)
Q Consensus 28 ~d~ea~~~~r~l~~~eGi~~-------G~-------Ssga~l~aa~~~a~~~~~~~~~Vv~i~~D~g~kY~ 84 (106)
...||..+...|.++.|+-. .. .+..++..+++...+...+++.+++-++++|.+-.
T Consensus 73 ~vnDA~~m~~~L~~~~Gf~~~~I~lLtd~~~~~~~~pTr~nI~~aL~~L~~~a~pgD~llfYFSGHG~q~~ 143 (350)
T 4f6o_A 73 CINDAHNIFNFLTNGYGYSSDDIVILTDDQNDLVRVPTRANMIRAMQWLVKDAQPNDSLFLHYSGHGGQTE 143 (350)
T ss_dssp HHHHHHHHHHHHHHHSCCCGGGEEEEETTSSCGGGSCCHHHHHHHHHHHHTTCCTTCEEEEEEESCEEEC-
T ss_pred HHHHHHHHHHHHHHhcCCCccceeeecccccccccCCCHHHHHHHHHHHHHhCCCCCEEEEEEcCCceecc
Confidence 45666666666655557532 21 35666666665443332468899999999998643
No 141
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=20.17 E-value=87 Score=21.46 Aligned_cols=30 Identities=20% Similarity=0.392 Sum_probs=22.3
Q ss_pred HhCceeeechHHHHHHHHHHHHHhCCCCCEEEEE
Q 037531 42 KEGLLVGISSGAAAAAAIKIAKRAENAGKLIVVI 75 (106)
Q Consensus 42 ~eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i 75 (106)
+.-++.|+|+|...+.+.+++++ +.+|+++
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~----G~~V~~~ 41 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLARA----GARVVLA 41 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT----TCEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHC----CCEEEEE
Confidence 34478899999999999998875 3455544
No 142
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=20.01 E-value=90 Score=21.08 Aligned_cols=30 Identities=17% Similarity=0.047 Sum_probs=22.0
Q ss_pred hCceeeechHHHHHHHHHHHHHhCCCCCEEEEEe
Q 037531 43 EGLLVGISSGAAAAAAIKIAKRAENAGKLIVVIF 76 (106)
Q Consensus 43 eGi~~G~Ssga~l~aa~~~a~~~~~~~~~Vv~i~ 76 (106)
.-++.|+|+|...+.+.+++++ +.+|+++.
T Consensus 24 ~vlITGas~gIG~~la~~l~~~----G~~V~~~~ 53 (251)
T 3orf_A 24 NILVLGGSGALGAEVVKFFKSK----SWNTISID 53 (251)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT----TCEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHC----CCEEEEEe
Confidence 3478899999999999888875 34554443
Done!