Query 037533
Match_columns 297
No_of_seqs 130 out of 722
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 13:12:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037533.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037533hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02629 powdery mildew resist 100.0 5.7E-96 1E-100 701.9 23.4 268 1-281 114-386 (387)
2 PF13839 PC-Esterase: GDSL/SGN 100.0 6.7E-54 1.4E-58 388.9 20.1 242 1-281 9-262 (263)
3 cd01842 SGNH_hydrolase_like_5 97.9 3.6E-05 7.8E-10 67.5 6.9 52 106-174 52-103 (183)
4 cd01834 SGNH_hydrolase_like_2 75.9 1.3 2.8E-05 37.4 1.1 15 7-21 1-15 (191)
5 PF00185 OTCace: Aspartate/orn 75.7 2.1 4.6E-05 36.6 2.3 25 6-31 1-25 (158)
6 COG2845 Uncharacterized protei 69.2 5.2 0.00011 38.5 3.5 26 6-31 115-140 (354)
7 cd01841 NnaC_like NnaC (CMP-Ne 66.7 2.7 5.9E-05 35.3 1.0 71 141-230 70-140 (174)
8 cd01829 SGNH_hydrolase_peri2 S 64.0 4.4 9.6E-05 34.7 1.9 95 103-230 58-153 (200)
9 cd01841 NnaC_like NnaC (CMP-Ne 61.9 32 0.00069 28.7 6.7 12 8-19 1-12 (174)
10 cd01825 SGNH_hydrolase_peri1 S 57.3 6.1 0.00013 33.3 1.5 74 141-232 76-149 (189)
11 PRK14805 ornithine carbamoyltr 57.3 8.4 0.00018 36.6 2.6 26 4-31 144-169 (302)
12 cd01835 SGNH_hydrolase_like_3 55.1 6 0.00013 33.8 1.1 13 8-20 2-14 (193)
13 cd01838 Isoamyl_acetate_hydrol 52.2 7.1 0.00015 33.0 1.1 58 103-175 62-119 (199)
14 cd01844 SGNH_hydrolase_like_6 51.5 7.5 0.00016 32.9 1.2 30 143-174 75-104 (177)
15 cd01832 SGNH_hydrolase_like_1 50.2 7 0.00015 32.9 0.8 70 141-231 87-156 (185)
16 cd01827 sialate_O-acetylestera 48.9 67 0.0015 26.9 6.7 83 141-242 88-175 (188)
17 cd01833 XynB_like SGNH_hydrola 47.0 7.7 0.00017 31.9 0.5 98 103-240 39-143 (157)
18 cd01831 Endoglucanase_E_like E 46.4 10 0.00023 31.8 1.2 14 9-22 1-14 (169)
19 cd01827 sialate_O-acetylestera 45.6 11 0.00023 31.9 1.2 12 9-20 2-13 (188)
20 cd01822 Lysophospholipase_L1_l 44.7 11 0.00024 31.3 1.2 47 103-171 63-109 (177)
21 COG0078 ArgF Ornithine carbamo 44.3 17 0.00036 34.8 2.3 23 4-28 150-172 (310)
22 PLN02342 ornithine carbamoyltr 42.2 21 0.00046 34.7 2.8 26 4-31 191-216 (348)
23 PRK04284 ornithine carbamoyltr 40.8 25 0.00053 33.9 3.0 28 3-31 151-178 (332)
24 PRK10528 multifunctional acyl- 39.7 16 0.00035 31.6 1.4 14 7-20 10-23 (191)
25 cd00229 SGNH_hydrolase SGNH_hy 38.6 12 0.00027 29.8 0.5 59 99-175 60-118 (187)
26 cd01839 SGNH_arylesterase_like 38.1 17 0.00037 31.5 1.3 34 141-174 100-136 (208)
27 cd00885 cinA Competence-damage 37.6 24 0.00052 30.5 2.1 24 258-281 141-164 (170)
28 cd01836 FeeA_FeeB_like SGNH_hy 37.6 17 0.00038 30.8 1.3 52 103-174 66-117 (191)
29 cd01830 XynE_like SGNH_hydrola 37.3 18 0.00038 31.4 1.3 31 141-175 101-131 (204)
30 PRK02102 ornithine carbamoyltr 36.8 31 0.00066 33.3 2.9 27 4-31 152-178 (331)
31 PRK03670 competence damage-ind 36.1 25 0.00055 32.5 2.2 25 258-282 150-174 (252)
32 cd04501 SGNH_hydrolase_like_4 36.0 18 0.0004 30.4 1.1 48 104-173 59-106 (183)
33 PRK08192 aspartate carbamoyltr 35.9 32 0.00068 33.3 2.9 28 4-31 156-183 (338)
34 PF06462 Hyd_WA: Propeller; I 35.6 35 0.00075 21.3 2.1 21 162-182 8-29 (32)
35 PRK11891 aspartate carbamoyltr 35.4 33 0.00072 34.4 3.0 27 5-31 239-265 (429)
36 PRK03515 ornithine carbamoyltr 35.3 32 0.00069 33.3 2.8 27 4-31 153-179 (336)
37 cd01820 PAF_acetylesterase_lik 35.2 16 0.00035 32.0 0.7 33 141-175 108-140 (214)
38 PRK07200 aspartate/ornithine c 33.8 41 0.00088 33.3 3.3 29 3-31 183-216 (395)
39 PRK00856 pyrB aspartate carbam 33.2 38 0.00083 32.2 2.9 28 4-31 153-180 (305)
40 PRK01713 ornithine carbamoyltr 32.9 38 0.00083 32.6 2.9 27 4-31 153-179 (334)
41 PLN02527 aspartate carbamoyltr 31.9 41 0.00089 32.0 2.9 28 4-31 148-175 (306)
42 PRK12562 ornithine carbamoyltr 31.9 41 0.00088 32.5 2.9 26 5-31 154-179 (334)
43 PRK00779 ornithine carbamoyltr 31.0 40 0.00087 32.0 2.6 26 4-31 149-174 (304)
44 TIGR00658 orni_carb_tr ornithi 30.6 43 0.00094 31.8 2.8 26 4-31 145-170 (304)
45 PF13472 Lipase_GDSL_2: GDSL-l 30.2 1.3E+02 0.0027 24.1 5.3 97 101-231 58-154 (179)
46 PF01861 DUF43: Protein of unk 29.7 26 0.00056 32.5 1.1 11 5-15 43-53 (243)
47 cd01828 sialate_O-acetylestera 29.6 24 0.00051 29.3 0.8 69 141-231 67-135 (169)
48 TIGR00670 asp_carb_tr aspartat 29.6 49 0.0011 31.4 3.0 28 4-31 147-174 (301)
49 PHA03298 envelope glycoprotein 28.3 36 0.00079 28.7 1.6 20 12-31 36-60 (167)
50 cd04506 SGNH_hydrolase_YpmR_li 28.1 30 0.00064 29.7 1.2 29 141-171 101-129 (204)
51 cd01821 Rhamnogalacturan_acety 27.6 32 0.0007 29.4 1.3 94 102-230 63-156 (198)
52 PRK14804 ornithine carbamoyltr 25.7 58 0.0013 31.0 2.8 26 4-31 150-175 (311)
53 PRK10113 cell division modulat 25.0 40 0.00086 25.2 1.1 16 4-19 38-55 (80)
54 cd04502 SGNH_hydrolase_like_7 23.8 38 0.00082 28.2 1.0 31 141-173 69-99 (171)
55 PF12026 DUF3513: Domain of un 23.7 3.7 8E-05 37.1 -5.4 16 5-20 132-147 (210)
56 COG0180 TrpS Tryptophanyl-tRNA 23.6 65 0.0014 31.0 2.6 37 142-178 59-96 (314)
57 PRK13376 pyrB bifunctional asp 22.7 73 0.0016 32.8 2.9 28 4-31 171-198 (525)
58 cd01840 SGNH_hydrolase_yrhL_li 22.5 37 0.00081 28.0 0.7 24 207-231 98-121 (150)
59 PF05515 Viral_NABP: Viral nuc 21.9 98 0.0021 25.8 3.0 29 258-286 9-37 (124)
60 PRK02255 putrescine carbamoylt 21.5 81 0.0017 30.5 2.8 26 4-31 151-176 (338)
61 PRK13556 azoreductase; Provisi 21.0 85 0.0018 27.6 2.7 26 93-118 78-103 (208)
No 1
>PLN02629 powdery mildew resistance 5
Probab=100.00 E-value=5.7e-96 Score=701.94 Aligned_cols=268 Identities=42% Similarity=0.894 Sum_probs=238.7
Q ss_pred CcccccCCcEEEEecccchhHHHHHHHHHhhccCCCCceeecCCccccccCCceEEEEeecceEEEEEEcccceeeccCC
Q 037533 1 MLELLRGKRLVFVGDSLNRNMWESLVCILKNLAKDPKNVYEANGRSHFRGEASYSFIFKDYNCSVEFFVSPFLVQEWEMP 80 (297)
Q Consensus 1 fL~~~RgK~~~FVGDSl~Rnq~eSLlClL~~~v~~~~~~~~~~~~~~~~~~~~~~~~f~~~n~Tv~~~wspfLV~~~~~~ 80 (297)
|||+|||||||||||||+|||||||+|||++++++..+.+.. ..++.+|+|++||+||+||||||||+.++.
T Consensus 114 fLe~~RgKrl~FVGDSL~RNQ~eSLvClL~~~~p~~~~~~~~-------~~~~~~~~F~~yN~TV~~ywspfLV~~~~~- 185 (387)
T PLN02629 114 FLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSR-------GDPLSTFKFLDYGVSISFYKAPYLVDIDAV- 185 (387)
T ss_pred HHHHhcCCeEEEeccccchhHHHHHHHHhhccCCCCceeeec-------CCceEEEEeccCCEEEEEEecceEEeeecC-
Confidence 899999999999999999999999999999987755433221 223458999999999999999999997542
Q ss_pred CCCCCccccccccccccchhcCCCCcEEEEccccccccccCCCCcccccCCccccccccHHHHHHHHHHHHHHHHHhhcC
Q 037533 81 EKDGTKKETLRLDLVGRSSDQYKGADIIIFNTGHWWTHDKTAEGKDYYQEGSHVYGELNVLEAFRRALTTWARWVDANVN 160 (297)
Q Consensus 81 ~~~~~~~~~l~lD~~~~~~~~~~~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~ 160 (297)
. ..++|+||.++.++++|+++|||||||||||++++...++.|++.|+.++++|+..+||++||+||++||+++++
T Consensus 186 --~--~~~~l~LD~id~~a~~w~~~DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~ 261 (387)
T PLN02629 186 --Q--GKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVD 261 (387)
T ss_pred --C--CceeEEecCcchhhhhhccCCEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCC
Confidence 1 246899999998899999999999999999999887778899999999999999999999999999999999999
Q ss_pred CCcceEEEEeecCCCCCCCCCCCCC-----CCCcccccCCCCcccCCCChhHHHHHHHHhccCceeEEeecccccccccc
Q 037533 161 PMKSMVFFRGYSASHFSGGQWNSGG-----ACDHETEPIKNKTYLTAYPPKMKVLESVLKGMKTHVTYLNITRLTDYRKD 235 (297)
Q Consensus 161 ~~~~~vf~Rt~SP~Hfe~g~W~~GG-----~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~v~lLdiT~ls~~R~D 235 (297)
+.+++|||||+||+|||||+||+|| +|+++|+|+.++++.++...+++++++++++++.+|+|||||+||++|||
T Consensus 262 ~~kt~vffrT~SP~Hfe~g~Wn~gg~~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~D 341 (387)
T PLN02629 262 RSRTRVFFQSISPTHYNPSEWSAGASTTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKD 341 (387)
T ss_pred CCCcEEEEEecCcccccCCCcCCCCCCCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCC
Confidence 9999999999999999999999875 59889999998777666777889999999999999999999999999999
Q ss_pred CCCCccccCCCCccccCCCCCCCCcccccCCCcchHHHHHHHHHHH
Q 037533 236 GHPSIYRKQHISDAERRSPLRYQDCSHWCLPGVPDAWNELFYAELI 281 (297)
Q Consensus 236 gHps~y~~~~~~~~~~~~~~~~~DC~HWCLPG~~D~WNelL~~~L~ 281 (297)
||||+|++. .+++++..|..++||+||||||||||||||||++|+
T Consensus 342 gHPs~Y~~~-~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~ 386 (387)
T PLN02629 342 GHPSIYSGD-LSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF 386 (387)
T ss_pred CCcccccCC-CchhhccCCCCCCCcccccCCCCCccHHHHHHHHHh
Confidence 999999754 334556677778999999999999999999999997
No 2
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Probab=100.00 E-value=6.7e-54 Score=388.85 Aligned_cols=242 Identities=38% Similarity=0.760 Sum_probs=183.8
Q ss_pred CcccccCCcEEEEecccchhHHHHHHHHHhhccCCCCceeecCCccccccCCceEEEEeecceEEEEEEcccceeeccCC
Q 037533 1 MLELLRGKRLVFVGDSLNRNMWESLVCILKNLAKDPKNVYEANGRSHFRGEASYSFIFKDYNCSVEFFVSPFLVQEWEMP 80 (297)
Q Consensus 1 fL~~~RgK~~~FVGDSl~Rnq~eSLlClL~~~v~~~~~~~~~~~~~~~~~~~~~~~~f~~~n~Tv~~~wspfLV~~~~~~ 80 (297)
+|++||||+|+|||||++||||+||+|+|.+..+..... .......+......+.|+++|+||+|+|+|||++.
T Consensus 9 cL~~lr~k~i~fiGDS~~Rq~~~~l~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~f~~~p~l~~~---- 82 (263)
T PF13839_consen 9 CLQRLRNKRIVFIGDSTTRQQYESLVCLLGPEVPSWQES--PHSGIEFPNHRNFRYNFPDYNVTLSFYWDPFLVDQ---- 82 (263)
T ss_pred HHHHccCCEEEEEechhhHHHHHHHHHHHhccccccccc--cccccccccCCceEEeecCCCeEEEEecccccccc----
Confidence 477888999999999999999999999999865511100 00000111112347889999999999999999973
Q ss_pred CCCCCccccccccccc-cchhcCC----CCcEEEEccccccccccCCCCcccccCCccccccccHHHHHHHHHHHHHHHH
Q 037533 81 EKDGTKKETLRLDLVG-RSSDQYK----GADIIIFNTGHWWTHDKTAEGKDYYQEGSHVYGELNVLEAFRRALTTWARWV 155 (297)
Q Consensus 81 ~~~~~~~~~l~lD~~~-~~~~~~~----~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i 155 (297)
+|.++ .++..|. ..||||||+|+||.+.+. ++..++. .++...++|+.+|+++++++
T Consensus 83 -----------l~~~~~~~~~~~~~~~~~pdvvV~nsG~W~~~~~~-----~~~~~~~--~~~~~~~~y~~~l~~~~~~~ 144 (263)
T PF13839_consen 83 -----------LDSIDEEIANNWPTSGARPDVVVINSGLWYLRRSG-----FIEWGDN--KEINPLEAYRNRLRTLADWV 144 (263)
T ss_pred -----------ccccchhhhccccccccCCCEEEEEcchhhhhcch-----hcccCCC--cCcchHHHHHHHHHHHHHHH
Confidence 55544 3455555 899999999999997642 2222333 56778899999999999999
Q ss_pred HhhcCCCc--ceEEEEeecCCCCCCCCCCCCCCCCcccccCCCCcccCCCChhHHHHHHHHh---ccCceeEEeec-ccc
Q 037533 156 DANVNPMK--SMVFFRGYSASHFSGGQWNSGGACDHETEPIKNKTYLTAYPPKMKVLESVLK---GMKTHVTYLNI-TRL 229 (297)
Q Consensus 156 ~~~~~~~~--~~vf~Rt~SP~Hfe~g~W~~GG~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~---~~~~~v~lLdi-T~l 229 (297)
.+.+++.+ ++||||+++|+||++++|++||+|.. + ... .........+.+++. ..+.++++||| |.+
T Consensus 145 ~~~~~~~~~~~~v~~r~~~P~h~~~~~~~~gg~c~~---~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ldi~~~~ 217 (263)
T PF13839_consen 145 RRLLDRSKPPTRVFWRTTSPVHFEGGDWNSGGSCNP---P-RRE---EITNEQIDELNEALREALKKNSRVHLLDIFTML 217 (263)
T ss_pred HhhhccccccceEEEEecCCccccccccccCCCcCc---c-ccc---CCCHHHHHHHHHHHHHHhhcCCCceeeeecchh
Confidence 88887766 89999999999999999999999981 1 111 112233334444433 24679999999 999
Q ss_pred ccccc-cCCCCccccCCCCccccCCCCCCCCcccccCCCcchHHHHHHHHHHH
Q 037533 230 TDYRK-DGHPSIYRKQHISDAERRSPLRYQDCSHWCLPGVPDAWNELFYAELI 281 (297)
Q Consensus 230 s~~R~-DgHps~y~~~~~~~~~~~~~~~~~DC~HWCLPG~~D~WNelL~~~L~ 281 (297)
+.+|+ ||||++|++.... ...||+|||+|||+|+||+|||++||
T Consensus 218 ~~~r~~d~H~~~~~~~~~~--------~~~Dc~Hw~~p~v~d~~~~lL~~~lc 262 (263)
T PF13839_consen 218 SSFRPDDAHPGIYRNQWPR--------QPQDCLHWCLPGVIDTWNELLLNLLC 262 (263)
T ss_pred hhccccccCcccccCCCCC--------CCCCCcCcCCCcHHHHHHHHHHHHhh
Confidence 99999 9999999886421 14899999999999999999999997
No 3
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.88 E-value=3.6e-05 Score=67.46 Aligned_cols=52 Identities=21% Similarity=0.465 Sum_probs=39.2
Q ss_pred cEEEEccccccccccCCCCcccccCCccccccccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCC
Q 037533 106 DIIIFNTGHWWTHDKTAEGKDYYQEGSHVYGELNVLEAFRRALTTWARWVDANVNPMKSMVFFRGYSAS 174 (297)
Q Consensus 106 DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~ 174 (297)
||||||+|.|=. .+|.. ...+-|++.|.+++.-+.+-+ |.+++++|.|++|-
T Consensus 52 DVIi~Ns~LWDl--------~ry~~--------~~~~~Y~~NL~~Lf~rLk~~l-p~~allIW~tt~Pv 103 (183)
T cd01842 52 DLVIMNSCLWDL--------SRYQR--------NSMKTYRENLERLFSKLDSVL-PIECLIVWNTAMPV 103 (183)
T ss_pred eEEEEecceecc--------cccCC--------CCHHHHHHHHHHHHHHHHhhC-CCccEEEEecCCCC
Confidence 999999999922 23321 246889999999988776544 55688999999986
No 4
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=75.93 E-value=1.3 Score=37.37 Aligned_cols=15 Identities=40% Similarity=0.864 Sum_probs=13.9
Q ss_pred CCcEEEEecccchhH
Q 037533 7 GKRLVFVGDSLNRNM 21 (297)
Q Consensus 7 gK~~~FVGDSl~Rnq 21 (297)
||+|+|+|||++...
T Consensus 1 ~~~v~~~GDSit~g~ 15 (191)
T cd01834 1 GDRIVFIGNSITDRG 15 (191)
T ss_pred CCEEEEeCCChhhcc
Confidence 799999999999976
No 5
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=75.72 E-value=2.1 Score=36.61 Aligned_cols=25 Identities=28% Similarity=0.559 Sum_probs=22.5
Q ss_pred cCCcEEEEecccchhHHHHHHHHHhh
Q 037533 6 RGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 6 RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.|++|+|||| ..-|-..||+.+|+.
T Consensus 1 ~gl~i~~vGD-~~~rv~~Sl~~~~~~ 25 (158)
T PF00185_consen 1 KGLKIAYVGD-GHNRVAHSLIELLAK 25 (158)
T ss_dssp TTEEEEEESS-TTSHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCChHHHHHHHHHHH
Confidence 4899999999 768999999999986
No 6
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=69.24 E-value=5.2 Score=38.54 Aligned_cols=26 Identities=31% Similarity=0.418 Sum_probs=23.1
Q ss_pred cCCcEEEEecccchhHHHHHHHHHhh
Q 037533 6 RGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 6 RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
-++++.||||||++..-+-|.--|.+
T Consensus 115 ~a~kvLvvGDslm~gla~gl~~al~t 140 (354)
T COG2845 115 DADKVLVVGDSLMQGLAEGLDKALAT 140 (354)
T ss_pred CCCEEEEechHHhhhhHHHHHHHhcc
Confidence 36899999999999999999888875
No 7
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=66.68 E-value=2.7 Score=35.25 Aligned_cols=71 Identities=7% Similarity=0.097 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCCCCCCCCCCCCCCCcccccCCCCcccCCCChhHHHHHHHHhccCce
Q 037533 141 LEAFRRALTTWARWVDANVNPMKSMVFFRGYSASHFSGGQWNSGGACDHETEPIKNKTYLTAYPPKMKVLESVLKGMKTH 220 (297)
Q Consensus 141 ~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~Hfe~g~W~~GG~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~ 220 (297)
.+.|+..++++.+.+.+.. ..+.|++-++.|..... .+. .... ......+++++++.++. .
T Consensus 70 ~~~~~~~~~~l~~~~~~~~--p~~~vi~~~~~p~~~~~-------~~~----~~~~----~~~~~~n~~l~~~a~~~--~ 130 (174)
T cd01841 70 SNQFIKWYRDIIEQIREEF--PNTKIYLLSVLPVLEED-------EIK----TRSN----TRIQRLNDAIKELAPEL--G 130 (174)
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCEEEEEeeCCcCccc-------ccc----cCCH----HHHHHHHHHHHHHHHHC--C
Confidence 4567777888777665432 24568888888765321 010 0000 00112234455554433 4
Q ss_pred eEEeeccccc
Q 037533 221 VTYLNITRLT 230 (297)
Q Consensus 221 v~lLdiT~ls 230 (297)
+.++|+..+.
T Consensus 131 ~~~id~~~~~ 140 (174)
T cd01841 131 VTFIDLNDVL 140 (174)
T ss_pred CEEEEcHHHH
Confidence 8999998765
No 8
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=64.01 E-value=4.4 Score=34.72 Aligned_cols=95 Identities=11% Similarity=0.060 Sum_probs=51.6
Q ss_pred CCCcEEEEccccccccccCCCCcccccCCc-cccccccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCCCCCCCC
Q 037533 103 KGADIIIFNTGHWWTHDKTAEGKDYYQEGS-HVYGELNVLEAFRRALTTWARWVDANVNPMKSMVFFRGYSASHFSGGQW 181 (297)
Q Consensus 103 ~~~DvlV~ntGhWw~~~~~~~~~~~~~~g~-~~~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~Hfe~g~W 181 (297)
...|++|++.|.+=.... +..+. .....-.+.+.|+..|+.+.+.+.+ ....|++-+..|.+-.
T Consensus 58 ~~pd~vii~~G~ND~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~lv~~~~~----~~~~vili~~pp~~~~---- 122 (200)
T cd01829 58 EKPDVVVVFLGANDRQDI-------RDGDGYLKFGSPEWEEEYRQRIDELLNVARA----KGVPVIWVGLPAMRSP---- 122 (200)
T ss_pred CCCCEEEEEecCCCCccc-------cCCCceeecCChhHHHHHHHHHHHHHHHHHh----CCCcEEEEcCCCCCCh----
Confidence 357999999998832110 01100 0000112457888888887766542 2456888777765421
Q ss_pred CCCCCCCcccccCCCCcccCCCChhHHHHHHHHhccCceeEEeeccccc
Q 037533 182 NSGGACDHETEPIKNKTYLTAYPPKMKVLESVLKGMKTHVTYLNITRLT 230 (297)
Q Consensus 182 ~~GG~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~v~lLdiT~ls 230 (297)
.+. .. ....++.+++++++. .+.++|++.+.
T Consensus 123 ----~~~---------~~---~~~~~~~~~~~a~~~--~~~~id~~~~~ 153 (200)
T cd01829 123 ----KLS---------AD---MVYLNSLYREEVAKA--GGEFVDVWDGF 153 (200)
T ss_pred ----hHh---------HH---HHHHHHHHHHHHHHc--CCEEEEhhHhh
Confidence 010 00 112344555555543 58999998775
No 9
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=61.89 E-value=32 Score=28.66 Aligned_cols=12 Identities=58% Similarity=0.960 Sum_probs=11.1
Q ss_pred CcEEEEecccch
Q 037533 8 KRLVFVGDSLNR 19 (297)
Q Consensus 8 K~~~FVGDSl~R 19 (297)
|+|+|+|||++.
T Consensus 1 ~~iv~~GdS~t~ 12 (174)
T cd01841 1 KNIVFIGDSLFE 12 (174)
T ss_pred CCEEEEcchhhh
Confidence 789999999996
No 10
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=57.31 E-value=6.1 Score=33.29 Aligned_cols=74 Identities=11% Similarity=0.150 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCCCCCCCCCCCCCCCcccccCCCCcccCCCChhHHHHHHHHhccCce
Q 037533 141 LEAFRRALTTWARWVDANVNPMKSMVFFRGYSASHFSGGQWNSGGACDHETEPIKNKTYLTAYPPKMKVLESVLKGMKTH 220 (297)
Q Consensus 141 ~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~Hfe~g~W~~GG~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~ 220 (297)
.+.|...|+.+.+.+.+.. .+..|++.+..|.-+... + |.... . ......++.++++.++. .
T Consensus 76 ~~~~~~~~~~li~~i~~~~--~~~~iv~~~~~~~~~~~~-----~-~~~~~----~----~~~~~~~~~~~~~a~~~--~ 137 (189)
T cd01825 76 ASEYRQQLREFIKRLRQIL--PNASILLVGPPDSLQKTG-----A-GRWRT----P----PGLDAVIAAQRRVAKEE--G 137 (189)
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCeEEEEcCCchhccCC-----C-CCccc----C----CcHHHHHHHHHHHHHHc--C
Confidence 4678888888887775432 246788888766533210 1 11000 0 11222344556665544 4
Q ss_pred eEEeeccccccc
Q 037533 221 VTYLNITRLTDY 232 (297)
Q Consensus 221 v~lLdiT~ls~~ 232 (297)
+.++|+...+.-
T Consensus 138 v~~vd~~~~~~~ 149 (189)
T cd01825 138 IAFWDLYAAMGG 149 (189)
T ss_pred CeEEeHHHHhCC
Confidence 999999977643
No 11
>PRK14805 ornithine carbamoyltransferase; Provisional
Probab=57.29 E-value=8.4 Score=36.62 Aligned_cols=26 Identities=27% Similarity=0.294 Sum_probs=22.2
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||. .|-..||+.+++.
T Consensus 144 ~l~g~kva~vGD~--~~v~~S~~~~~~~ 169 (302)
T PRK14805 144 DVSKVKLAYVGDG--NNVTHSLMYGAAI 169 (302)
T ss_pred CcCCcEEEEEcCC--CccHHHHHHHHHH
Confidence 4789999999993 5788999999875
No 12
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=55.12 E-value=6 Score=33.80 Aligned_cols=13 Identities=62% Similarity=0.830 Sum_probs=11.6
Q ss_pred CcEEEEecccchh
Q 037533 8 KRLVFVGDSLNRN 20 (297)
Q Consensus 8 K~~~FVGDSl~Rn 20 (297)
|+|+|+|||++..
T Consensus 2 ~~i~~lGDSit~G 14 (193)
T cd01835 2 KRLIVVGDSLVYG 14 (193)
T ss_pred cEEEEEcCccccC
Confidence 6899999999874
No 13
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=52.18 E-value=7.1 Score=33.00 Aligned_cols=58 Identities=12% Similarity=0.091 Sum_probs=34.4
Q ss_pred CCCcEEEEccccccccccCCCCcccccCCccccccccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCC
Q 037533 103 KGADIIIFNTGHWWTHDKTAEGKDYYQEGSHVYGELNVLEAFRRALTTWARWVDANVNPMKSMVFFRGYSASH 175 (297)
Q Consensus 103 ~~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~H 175 (297)
...|++|+..|.-=. ...+.. .-...+.|+..++.+.+.+.+.. ..+.|++-|..|..
T Consensus 62 ~~pd~vii~~G~ND~----------~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~--~~~~ii~~t~~~~~ 119 (199)
T cd01838 62 AQPDLVTIFFGANDA----------ALPGQP---QHVPLDEYKENLRKIVSHLKSLS--PKTKVILITPPPVD 119 (199)
T ss_pred CCceEEEEEecCccc----------cCCCCC---CcccHHHHHHHHHHHHHHHHhhC--CCCeEEEeCCCCCC
Confidence 379999998876411 111100 00125678888888887765432 24568888877644
No 14
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=51.54 E-value=7.5 Score=32.94 Aligned_cols=30 Identities=10% Similarity=0.139 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCcceEEEEeecCC
Q 037533 143 AFRRALTTWARWVDANVNPMKSMVFFRGYSAS 174 (297)
Q Consensus 143 ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~ 174 (297)
.|+..++.+.+.|.+.. | ++.+++-+..|.
T Consensus 75 ~~~~~~~~~i~~i~~~~-p-~~~iil~~~~~~ 104 (177)
T cd01844 75 MVRERLGPLVKGLRETH-P-DTPILLVSPRYC 104 (177)
T ss_pred HHHHHHHHHHHHHHHHC-c-CCCEEEEecCCC
Confidence 57777777777776543 3 355777776554
No 15
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=50.25 E-value=7 Score=32.94 Aligned_cols=70 Identities=11% Similarity=0.139 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCCCCCCCCCCCCCCCcccccCCCCcccCCCChhHHHHHHHHhccCce
Q 037533 141 LEAFRRALTTWARWVDANVNPMKSMVFFRGYSASHFSGGQWNSGGACDHETEPIKNKTYLTAYPPKMKVLESVLKGMKTH 220 (297)
Q Consensus 141 ~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~Hfe~g~W~~GG~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~ 220 (297)
.+.|+..++.+.+.+. . ....|++-|..|.- + ..|+..... ......++.++++.++ ..
T Consensus 87 ~~~~~~~~~~~i~~i~---~-~~~~vil~~~~~~~-----------~---~~~~~~~~~-~~~~~~n~~l~~~a~~--~~ 145 (185)
T cd01832 87 PDTYRADLEEAVRRLR---A-AGARVVVFTIPDPA-----------V---LEPFRRRVR-ARLAAYNAVIRAVAAR--YG 145 (185)
T ss_pred HHHHHHHHHHHHHHHH---h-CCCEEEEecCCCcc-----------c---cchhHHHHH-HHHHHHHHHHHHHHHH--cC
Confidence 4567888888777664 1 23467777765540 0 122211100 0011123445555553 36
Q ss_pred eEEeecccccc
Q 037533 221 VTYLNITRLTD 231 (297)
Q Consensus 221 v~lLdiT~ls~ 231 (297)
+.++|+..+..
T Consensus 146 v~~vd~~~~~~ 156 (185)
T cd01832 146 AVHVDLWEHPE 156 (185)
T ss_pred CEEEecccCcc
Confidence 99999987754
No 16
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=48.93 E-value=67 Score=26.94 Aligned_cols=83 Identities=11% Similarity=0.118 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCCCCCCCCCCCCCCCcccccCCCCcccCCCChhHHHHHHHHhccCce
Q 037533 141 LEAFRRALTTWARWVDANVNPMKSMVFFRGYSASHFSGGQWNSGGACDHETEPIKNKTYLTAYPPKMKVLESVLKGMKTH 220 (297)
Q Consensus 141 ~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~Hfe~g~W~~GG~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~ 220 (297)
.+.|+..++.+.+.+.+. . .++.+++.|..|..... +. +...... .....+.++++.++ ..
T Consensus 88 ~~~~~~~l~~li~~i~~~-~-~~~~iil~t~~p~~~~~--~~----------~~~~~~~---~~~~~~~~~~~a~~--~~ 148 (188)
T cd01827 88 KDDFKKDYETMIDSFQAL-P-SKPKIYICYPIPAYYGD--GG----------FINDNII---KKEIQPMIDKIAKK--LN 148 (188)
T ss_pred HHHHHHHHHHHHHHHHHH-C-CCCeEEEEeCCcccccC--CC----------ccchHHH---HHHHHHHHHHHHHH--cC
Confidence 357788888887776543 2 24568888777754211 10 1111000 00113344555443 46
Q ss_pred eEEeecccccc----ccccC-CCCccc
Q 037533 221 VTYLNITRLTD----YRKDG-HPSIYR 242 (297)
Q Consensus 221 v~lLdiT~ls~----~R~Dg-Hps~y~ 242 (297)
+.++|+...+. +=+|+ ||+..+
T Consensus 149 ~~~vD~~~~~~~~~~~~~Dg~Hpn~~G 175 (188)
T cd01827 149 LKLIDLHTPLKGKPELVPDWVHPNEKG 175 (188)
T ss_pred CcEEEccccccCCccccCCCCCcCHHH
Confidence 88888876643 33577 877544
No 17
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=46.99 E-value=7.7 Score=31.86 Aligned_cols=98 Identities=13% Similarity=0.152 Sum_probs=52.3
Q ss_pred CCCcEEEEccccccccccCCCCcccccCCccccccccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCCCCCCCCC
Q 037533 103 KGADIIIFNTGHWWTHDKTAEGKDYYQEGSHVYGELNVLEAFRRALTTWARWVDANVNPMKSMVFFRGYSASHFSGGQWN 182 (297)
Q Consensus 103 ~~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~Hfe~g~W~ 182 (297)
...|+||++.|.= +.... . -.+.|+..++++.+.+.+. .| +..+++-+..|.-..
T Consensus 39 ~~pd~vvi~~G~N----------D~~~~-------~-~~~~~~~~~~~~i~~i~~~-~p-~~~ii~~~~~p~~~~----- 93 (157)
T cd01833 39 AKPDVVLLHLGTN----------DLVLN-------R-DPDTAPDRLRALIDQMRAA-NP-DVKIIVATLIPTTDA----- 93 (157)
T ss_pred CCCCEEEEeccCc----------ccccC-------C-CHHHHHHHHHHHHHHHHHh-CC-CeEEEEEeCCCCCCc-----
Confidence 3679999987742 11111 1 1357788888877776544 22 455777666553211
Q ss_pred CCCCCCcccccCCCCcccCCCChhHHHHHHHHhcc---CceeEEeecccccc---ccccC-CCCc
Q 037533 183 SGGACDHETEPIKNKTYLTAYPPKMKVLESVLKGM---KTHVTYLNITRLTD---YRKDG-HPSI 240 (297)
Q Consensus 183 ~GG~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~---~~~v~lLdiT~ls~---~R~Dg-Hps~ 240 (297)
+. .. .....++.+++++++. +..+.++|+..... +.+|+ ||+.
T Consensus 94 ----------~~--~~---~~~~~n~~l~~~~~~~~~~~~~v~~vd~~~~~~~~~~~~Dg~Hpn~ 143 (157)
T cd01833 94 ----------SG--NA---RIAEYNAAIPGVVADLRTAGSPVVLVDMSTGYTTADDLYDGLHPND 143 (157)
T ss_pred ----------ch--hH---HHHHHHHHHHHHHHHHhcCCCCEEEEecCCCCCCcccccCCCCCch
Confidence 00 00 0112234445544432 35799999998863 45554 5553
No 18
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=46.41 E-value=10 Score=31.77 Aligned_cols=14 Identities=29% Similarity=0.584 Sum_probs=11.1
Q ss_pred cEEEEecccchhHH
Q 037533 9 RLVFVGDSLNRNMW 22 (297)
Q Consensus 9 ~~~FVGDSl~Rnq~ 22 (297)
+|.|+|||++-...
T Consensus 1 ~i~~iGDSit~G~~ 14 (169)
T cd01831 1 KIEFIGDSITCGYG 14 (169)
T ss_pred CEEEEeccccccCc
Confidence 58999999987543
No 19
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=45.56 E-value=11 Score=31.93 Aligned_cols=12 Identities=25% Similarity=0.620 Sum_probs=10.1
Q ss_pred cEEEEecccchh
Q 037533 9 RLVFVGDSLNRN 20 (297)
Q Consensus 9 ~~~FVGDSl~Rn 20 (297)
||+|+||||+..
T Consensus 2 ~i~~~GDSit~G 13 (188)
T cd01827 2 KVACVGNSITEG 13 (188)
T ss_pred eEEEEecccccc
Confidence 699999999654
No 20
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=44.73 E-value=11 Score=31.31 Aligned_cols=47 Identities=21% Similarity=0.294 Sum_probs=27.6
Q ss_pred CCCcEEEEccccccccccCCCCcccccCCccccccccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEee
Q 037533 103 KGADIIIFNTGHWWTHDKTAEGKDYYQEGSHVYGELNVLEAFRRALTTWARWVDANVNPMKSMVFFRGY 171 (297)
Q Consensus 103 ~~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~ 171 (297)
...|++||..|.- +... + . ..+.|+..++.+.+.+.+. ...+++-++
T Consensus 63 ~~pd~v~i~~G~N----------D~~~-~------~-~~~~~~~~l~~li~~~~~~----~~~vil~~~ 109 (177)
T cd01822 63 HKPDLVILELGGN----------DGLR-G------I-PPDQTRANLRQMIETAQAR----GAPVLLVGM 109 (177)
T ss_pred cCCCEEEEeccCc----------cccc-C------C-CHHHHHHHHHHHHHHHHHC----CCeEEEEec
Confidence 3679999988853 1110 0 1 1356777888777766433 345666654
No 21
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=44.28 E-value=17 Score=34.80 Aligned_cols=23 Identities=39% Similarity=0.650 Sum_probs=19.3
Q ss_pred cccCCcEEEEecccchhHHHHHHHH
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCI 28 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlCl 28 (297)
.++|++++||||- -|.-.||+=.
T Consensus 150 ~l~g~k~a~vGDg--NNv~nSl~~~ 172 (310)
T COG0078 150 SLKGLKLAYVGDG--NNVANSLLLA 172 (310)
T ss_pred cccCcEEEEEcCc--chHHHHHHHH
Confidence 3789999999998 8888888643
No 22
>PLN02342 ornithine carbamoyltransferase
Probab=42.22 E-value=21 Score=34.67 Aligned_cols=26 Identities=31% Similarity=0.542 Sum_probs=22.3
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||- .|-..||+.+++.
T Consensus 191 ~l~glkva~vGD~--~nva~Sli~~~~~ 216 (348)
T PLN02342 191 RLEGTKVVYVGDG--NNIVHSWLLLAAV 216 (348)
T ss_pred CcCCCEEEEECCC--chhHHHHHHHHHH
Confidence 4789999999994 4799999999875
No 23
>PRK04284 ornithine carbamoyltransferase; Provisional
Probab=40.82 E-value=25 Score=33.93 Aligned_cols=28 Identities=21% Similarity=0.290 Sum_probs=22.9
Q ss_pred ccccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 3 ELLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 3 ~~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
..+.|++|+||||..+ |-..||+=+++.
T Consensus 151 g~l~g~kia~vGD~~~-~v~~Sl~~~~~~ 178 (332)
T PRK04284 151 KPYKDIKFTYVGDGRN-NVANALMQGAAI 178 (332)
T ss_pred CCcCCcEEEEecCCCc-chHHHHHHHHHH
Confidence 3578999999999755 688998888764
No 24
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=39.67 E-value=16 Score=31.62 Aligned_cols=14 Identities=36% Similarity=0.657 Sum_probs=11.9
Q ss_pred CCcEEEEecccchh
Q 037533 7 GKRLVFVGDSLNRN 20 (297)
Q Consensus 7 gK~~~FVGDSl~Rn 20 (297)
+.+|+|+||||+..
T Consensus 10 ~~~iv~~GDSit~G 23 (191)
T PRK10528 10 ADTLLILGDSLSAG 23 (191)
T ss_pred CCEEEEEeCchhhc
Confidence 46899999999865
No 25
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=38.63 E-value=12 Score=29.78 Aligned_cols=59 Identities=10% Similarity=0.010 Sum_probs=32.1
Q ss_pred hhcCCCCcEEEEccccccccccCCCCcccccCCccccccccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCC
Q 037533 99 SDQYKGADIIIFNTGHWWTHDKTAEGKDYYQEGSHVYGELNVLEAFRRALTTWARWVDANVNPMKSMVFFRGYSASH 175 (297)
Q Consensus 99 ~~~~~~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~H 175 (297)
.......|+||+..|..-.... . ......+...++.+.+.+.+ . .....|++-+..|..
T Consensus 60 ~~~~~~~d~vil~~G~ND~~~~-------~---------~~~~~~~~~~~~~~i~~~~~-~-~~~~~vv~~~~~~~~ 118 (187)
T cd00229 60 ALLKDKPDLVIIELGTNDLGRG-------G---------DTSIDEFKANLEELLDALRE-R-APGAKVILITPPPPP 118 (187)
T ss_pred hhccCCCCEEEEEecccccccc-------c---------ccCHHHHHHHHHHHHHHHHH-H-CCCCcEEEEeCCCCC
Confidence 3455778999999988753210 0 11234555556666555543 1 223456666555543
No 26
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=38.12 E-value=17 Score=31.46 Aligned_cols=34 Identities=3% Similarity=-0.049 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHhhcC---CCcceEEEEeecCC
Q 037533 141 LEAFRRALTTWARWVDANVN---PMKSMVFFRGYSAS 174 (297)
Q Consensus 141 ~~ay~~al~t~~~~i~~~~~---~~~~~vf~Rt~SP~ 174 (297)
.+.|+..++.+.+-+.+... ...++|++-+..|-
T Consensus 100 ~~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~ 136 (208)
T cd01839 100 AAEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPI 136 (208)
T ss_pred HHHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCcc
Confidence 35788888888776654321 02345677665543
No 27
>cd00885 cinA Competence-damaged protein. CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, where the domain is presumed to bind molybdopterin.
Probab=37.64 E-value=24 Score=30.53 Aligned_cols=24 Identities=25% Similarity=0.533 Sum_probs=19.7
Q ss_pred CCcccccCCCcchHHHHHHHHHHH
Q 037533 258 QDCSHWCLPGVPDAWNELFYAELI 281 (297)
Q Consensus 258 ~DC~HWCLPG~~D~WNelL~~~L~ 281 (297)
++|..+||||||..-..||-+.+.
T Consensus 141 ~~~~i~~lPG~P~e~~~m~~~~~~ 164 (170)
T cd00885 141 NGKNVFLLPGVPSEMKPMLEEEVL 164 (170)
T ss_pred CCeEEEEECCChHHHHHHHHHHHH
Confidence 479999999999988888876543
No 28
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=37.60 E-value=17 Score=30.78 Aligned_cols=52 Identities=15% Similarity=0.219 Sum_probs=31.3
Q ss_pred CCCcEEEEccccccccccCCCCcccccCCccccccccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCC
Q 037533 103 KGADIIIFNTGHWWTHDKTAEGKDYYQEGSHVYGELNVLEAFRRALTTWARWVDANVNPMKSMVFFRGYSAS 174 (297)
Q Consensus 103 ~~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~ 174 (297)
...|+|||+.|-= +.... ...+.|+..++.+.+.+.+.. + .+.||+-+..|-
T Consensus 66 ~~pd~Vii~~G~N----------D~~~~--------~~~~~~~~~l~~li~~i~~~~-~-~~~iiv~~~p~~ 117 (191)
T cd01836 66 TRFDVAVISIGVN----------DVTHL--------TSIARWRKQLAELVDALRAKF-P-GARVVVTAVPPL 117 (191)
T ss_pred CCCCEEEEEeccc----------CcCCC--------CCHHHHHHHHHHHHHHHHhhC-C-CCEEEEECCCCc
Confidence 4679999977642 11110 114567888888877765432 3 456888776654
No 29
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=37.35 E-value=18 Score=31.43 Aligned_cols=31 Identities=13% Similarity=-0.015 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCC
Q 037533 141 LEAFRRALTTWARWVDANVNPMKSMVFFRGYSASH 175 (297)
Q Consensus 141 ~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~H 175 (297)
.+.|+..|+.+.+.+.+. ...|++-|..|-.
T Consensus 101 ~~~~~~~l~~ii~~~~~~----~~~vil~t~~P~~ 131 (204)
T cd01830 101 AEELIAGYRQLIRRAHAR----GIKVIGATITPFE 131 (204)
T ss_pred HHHHHHHHHHHHHHHHHC----CCeEEEecCCCCC
Confidence 457888888887765432 3568888888754
No 30
>PRK02102 ornithine carbamoyltransferase; Validated
Probab=36.76 E-value=31 Score=33.33 Aligned_cols=27 Identities=41% Similarity=0.522 Sum_probs=23.0
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||.-+ |-..||+-+++.
T Consensus 152 ~l~g~~va~vGd~~~-~v~~Sl~~~~~~ 178 (331)
T PRK02102 152 PLKGLKLAYVGDGRN-NMANSLMVGGAK 178 (331)
T ss_pred CCCCCEEEEECCCcc-cHHHHHHHHHHH
Confidence 478999999999754 699999998875
No 31
>PRK03670 competence damage-inducible protein A; Provisional
Probab=36.09 E-value=25 Score=32.51 Aligned_cols=25 Identities=20% Similarity=0.492 Sum_probs=20.6
Q ss_pred CCcccccCCCcchHHHHHHHHHHHh
Q 037533 258 QDCSHWCLPGVPDAWNELFYAELII 282 (297)
Q Consensus 258 ~DC~HWCLPG~~D~WNelL~~~L~~ 282 (297)
..|.++||||||-.+..||-..++.
T Consensus 150 ~~~~v~~lPGvP~e~~~M~~~~v~p 174 (252)
T PRK03670 150 KGTKIFVLPGMPREMKAMLEKEVLP 174 (252)
T ss_pred CCeEEEEeCCChHHHHHHHHHHHHH
Confidence 4689999999999999998875543
No 32
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=35.97 E-value=18 Score=30.41 Aligned_cols=48 Identities=15% Similarity=0.157 Sum_probs=28.9
Q ss_pred CCcEEEEccccccccccCCCCcccccCCccccccccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecC
Q 037533 104 GADIIIFNTGHWWTHDKTAEGKDYYQEGSHVYGELNVLEAFRRALTTWARWVDANVNPMKSMVFFRGYSA 173 (297)
Q Consensus 104 ~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP 173 (297)
..|++|++.|.- +... + . ..+.|.+.++.+.+.+.+ ....+++-+..|
T Consensus 59 ~~d~v~i~~G~N----------D~~~-~------~-~~~~~~~~~~~li~~~~~----~~~~~il~~~~p 106 (183)
T cd04501 59 KPAVVIIMGGTN----------DIIV-N------T-SLEMIKDNIRSMVELAEA----NGIKVILASPLP 106 (183)
T ss_pred CCCEEEEEeccC----------cccc-C------C-CHHHHHHHHHHHHHHHHH----CCCcEEEEeCCC
Confidence 569999988765 1110 0 0 245677888887776643 234567766655
No 33
>PRK08192 aspartate carbamoyltransferase; Provisional
Probab=35.92 E-value=32 Score=33.31 Aligned_cols=28 Identities=25% Similarity=0.205 Sum_probs=23.4
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||-..-|-..||+-+|+.
T Consensus 156 ~l~g~kia~vGD~~~~rv~~Sl~~~l~~ 183 (338)
T PRK08192 156 GIDGMHIAMVGDLKFGRTVHSLSRLLCM 183 (338)
T ss_pred CcCCCEEEEECcCCCCchHHHHHHHHHH
Confidence 4789999999997656889999988764
No 34
>PF06462 Hyd_WA: Propeller; InterPro: IPR006624 Tectonins I and II are two dominant proteins in the nuclei and nuclear matrix from plasmodia of Physarum polycephalum (Slime mold) which encode 217 and 353 amino acids, respectively. Tectonin I is homologous to the C-terminal two-thirds of tectonin II. Both proteins contain six tandem repeats that are each 33-37 amino acids in length and define a new consensus sequence. Homologous repeats are found in L-6, a bacterial lipopolysaccharide-binding lectin from horseshoe crab hemocytes. The repetitive sequences of the tectonins and L-6 are reminiscent of the WD repeats of the beta-subunit of G proteins, suggesting that they form beta-propeller domains. The tectonins may be lectins that function as part of a transmembrane signalling complex during phagocytosis [].
Probab=35.58 E-value=35 Score=21.33 Aligned_cols=21 Identities=33% Similarity=0.629 Sum_probs=17.2
Q ss_pred CcceEEEEe-ecCCCCCCCCCC
Q 037533 162 MKSMVFFRG-YSASHFSGGQWN 182 (297)
Q Consensus 162 ~~~~vf~Rt-~SP~Hfe~g~W~ 182 (297)
..+.+++|+ +||...+|-.|.
T Consensus 8 ~~G~v~~R~Gis~~~P~G~~W~ 29 (32)
T PF06462_consen 8 SDGSVYFRTGISPSNPEGTSWE 29 (32)
T ss_pred CCCCEEEECcCCCCCCCCCCcE
Confidence 457899998 999988887775
No 35
>PRK11891 aspartate carbamoyltransferase; Provisional
Probab=35.40 E-value=33 Score=34.35 Aligned_cols=27 Identities=30% Similarity=0.359 Sum_probs=23.2
Q ss_pred ccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 5 LRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 5 ~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
+.|++|+||||-..-|-..||+-+++.
T Consensus 239 l~G~kIa~vGD~~~~rv~~Sl~~~la~ 265 (429)
T PRK11891 239 VDGAHIALVGDLKYGRTVHSLVKLLAL 265 (429)
T ss_pred cCCCEEEEECcCCCChHHHHHHHHHHH
Confidence 789999999998766889999988753
No 36
>PRK03515 ornithine carbamoyltransferase subunit I; Provisional
Probab=35.33 E-value=32 Score=33.26 Aligned_cols=27 Identities=26% Similarity=0.289 Sum_probs=21.7
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+|||| +..|-..||+=+++.
T Consensus 153 ~l~g~~ia~vGD-~~~~v~~Sl~~~~~~ 179 (336)
T PRK03515 153 AFNEMTLAYAGD-ARNNMGNSLLEAAAL 179 (336)
T ss_pred CcCCCEEEEeCC-CcCcHHHHHHHHHHH
Confidence 377999999999 434799999888764
No 37
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=35.17 E-value=16 Score=31.97 Aligned_cols=33 Identities=9% Similarity=0.222 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCC
Q 037533 141 LEAFRRALTTWARWVDANVNPMKSMVFFRGYSASH 175 (297)
Q Consensus 141 ~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~H 175 (297)
.+.|...++.+.+.+.+.. | .+.|++-+..|..
T Consensus 108 ~~~~~~~l~~ii~~l~~~~-P-~~~Iil~~~~p~~ 140 (214)
T cd01820 108 AEEIAEGILAIVEEIREKL-P-NAKILLLGLLPRG 140 (214)
T ss_pred HHHHHHHHHHHHHHHHHHC-C-CCeEEEEeccCCC
Confidence 3456667777766654432 2 3457777776654
No 38
>PRK07200 aspartate/ornithine carbamoyltransferase family protein; Validated
Probab=33.78 E-value=41 Score=33.34 Aligned_cols=29 Identities=17% Similarity=0.401 Sum_probs=22.0
Q ss_pred ccccCCcEEEEec---ccch--hHHHHHHHHHhh
Q 037533 3 ELLRGKRLVFVGD---SLNR--NMWESLVCILKN 31 (297)
Q Consensus 3 ~~~RgK~~~FVGD---Sl~R--nq~eSLlClL~~ 31 (297)
+.++|++|+|||| |.+| |-..||+-+++.
T Consensus 183 ~~l~g~kVaivg~~~~~~g~~~~Va~Sl~~~~~~ 216 (395)
T PRK07200 183 ENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTR 216 (395)
T ss_pred cccCCCEEEEEeccccccCCcchHHHHHHHHHHH
Confidence 3478999999998 3355 667888888764
No 39
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=33.24 E-value=38 Score=32.20 Aligned_cols=28 Identities=25% Similarity=0.315 Sum_probs=23.9
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||-..-|-..||+=+++.
T Consensus 153 ~l~g~kv~~vGD~~~~~v~~Sl~~~~~~ 180 (305)
T PRK00856 153 RLEGLKVAIVGDIKHSRVARSNIQALTR 180 (305)
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHH
Confidence 4789999999998766889999888865
No 40
>PRK01713 ornithine carbamoyltransferase; Provisional
Probab=32.95 E-value=38 Score=32.64 Aligned_cols=27 Identities=33% Similarity=0.396 Sum_probs=22.2
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||-. .|-..||+-+++.
T Consensus 153 ~l~gl~ia~vGD~~-~~v~~Sl~~~~~~ 179 (334)
T PRK01713 153 PLSEISYVYIGDAR-NNMGNSLLLIGAK 179 (334)
T ss_pred CcCCcEEEEECCCc-cCHHHHHHHHHHH
Confidence 46799999999954 4699999988865
No 41
>PLN02527 aspartate carbamoyltransferase
Probab=31.91 E-value=41 Score=31.98 Aligned_cols=28 Identities=32% Similarity=0.405 Sum_probs=22.7
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||-.+-|-+.||+=+|+.
T Consensus 148 ~l~g~kva~vGD~~~~rv~~Sl~~~~~~ 175 (306)
T PLN02527 148 RLDGIKVGLVGDLANGRTVRSLAYLLAK 175 (306)
T ss_pred CcCCCEEEEECCCCCChhHHHHHHHHHh
Confidence 4789999999998765789998877753
No 42
>PRK12562 ornithine carbamoyltransferase subunit F; Provisional
Probab=31.90 E-value=41 Score=32.52 Aligned_cols=26 Identities=31% Similarity=0.384 Sum_probs=22.4
Q ss_pred ccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 5 LRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 5 ~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
+.|++|+||||-.+ |-..||+-+++.
T Consensus 154 l~gl~va~vGD~~~-~v~~S~~~~~~~ 179 (334)
T PRK12562 154 FNEMTLVYAGDARN-NMGNSMLEAAAL 179 (334)
T ss_pred cCCcEEEEECCCCC-CHHHHHHHHHHH
Confidence 67999999999864 699999998865
No 43
>PRK00779 ornithine carbamoyltransferase; Provisional
Probab=30.98 E-value=40 Score=32.01 Aligned_cols=26 Identities=31% Similarity=0.408 Sum_probs=21.7
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|++||| . .|-..||+-+|+.
T Consensus 149 ~l~gl~i~~vGd-~-~~v~~Sl~~~l~~ 174 (304)
T PRK00779 149 SLKGLKVAWVGD-G-NNVANSLLLAAAL 174 (304)
T ss_pred CcCCcEEEEEeC-C-CccHHHHHHHHHH
Confidence 478999999999 3 4689999998865
No 44
>TIGR00658 orni_carb_tr ornithine carbamoyltransferase. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.
Probab=30.61 E-value=43 Score=31.76 Aligned_cols=26 Identities=35% Similarity=0.574 Sum_probs=22.1
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|++|||. .|-..||+.+|+.
T Consensus 145 ~l~g~~v~~vGd~--~~v~~Sl~~~l~~ 170 (304)
T TIGR00658 145 KLKGVKVVYVGDG--NNVCNSLMLAGAK 170 (304)
T ss_pred CCCCcEEEEEeCC--CchHHHHHHHHHH
Confidence 4688999999996 4699999999875
No 45
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=30.19 E-value=1.3e+02 Score=24.06 Aligned_cols=97 Identities=10% Similarity=0.112 Sum_probs=51.2
Q ss_pred cCCCCcEEEEccccccccccCCCCcccccCCccccccccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCCCCCCC
Q 037533 101 QYKGADIIIFNTGHWWTHDKTAEGKDYYQEGSHVYGELNVLEAFRRALTTWARWVDANVNPMKSMVFFRGYSASHFSGGQ 180 (297)
Q Consensus 101 ~~~~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~Hfe~g~ 180 (297)
.-...|+|||+.|.= +... |.. .......|+.+|+.+.+.+.. .+.|++-+..|.......
T Consensus 58 ~~~~~d~vvi~~G~N----------D~~~-~~~---~~~~~~~~~~~l~~~i~~~~~-----~~~vi~~~~~~~~~~~~~ 118 (179)
T PF13472_consen 58 KDPKPDLVVISFGTN----------DVLN-GDE---NDTSPEQYEQNLRRIIEQLRP-----HGPVILVSPPPRGPDPRD 118 (179)
T ss_dssp CGTTCSEEEEE--HH----------HHCT-CTT---CHHHHHHHHHHHHHHHHHHHT-----TSEEEEEE-SCSSSSTTT
T ss_pred ccCCCCEEEEEcccc----------cccc-ccc---ccccHHHHHHHHHHHHHhhcc-----cCcEEEecCCCccccccc
Confidence 457789999988842 1111 100 112355688888887766532 227888888877754322
Q ss_pred CCCCCCCCcccccCCCCcccCCCChhHHHHHHHHhccCceeEEeecccccc
Q 037533 181 WNSGGACDHETEPIKNKTYLTAYPPKMKVLESVLKGMKTHVTYLNITRLTD 231 (297)
Q Consensus 181 W~~GG~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~v~lLdiT~ls~ 231 (297)
+. . .. ........++++++++++. .+.++|+.....
T Consensus 119 ~~-----~-------~~-~~~~~~~~~~~~~~~a~~~--~~~~id~~~~~~ 154 (179)
T PF13472_consen 119 PK-----Q-------DY-LNRRIDRYNQAIRELAKKY--GVPFIDLFDAFD 154 (179)
T ss_dssp TH-----T-------TC-HHHHHHHHHHHHHHHHHHC--TEEEEEHHHHHB
T ss_pred cc-----c-------hh-hhhhHHHHHHHHHHHHHHc--CCEEEECHHHHc
Confidence 11 0 00 0000112244556655533 899999999854
No 46
>PF01861 DUF43: Protein of unknown function DUF43; InterPro: IPR002723 This family of prokaryotic proteins have not been characterised. All the members are 350-400 amino acids long.; PDB: 2QM3_A.
Probab=29.71 E-value=26 Score=32.46 Aligned_cols=11 Identities=64% Similarity=1.319 Sum_probs=8.6
Q ss_pred ccCCcEEEEec
Q 037533 5 LRGKRLVFVGD 15 (297)
Q Consensus 5 ~RgK~~~FVGD 15 (297)
|.||+|.||||
T Consensus 43 L~gk~il~lGD 53 (243)
T PF01861_consen 43 LEGKRILFLGD 53 (243)
T ss_dssp STT-EEEEES-
T ss_pred ccCCEEEEEcC
Confidence 78999999999
No 47
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=29.57 E-value=24 Score=29.35 Aligned_cols=69 Identities=12% Similarity=0.041 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCCCCCCCCCCCCCCCcccccCCCCcccCCCChhHHHHHHHHhccCce
Q 037533 141 LEAFRRALTTWARWVDANVNPMKSMVFFRGYSASHFSGGQWNSGGACDHETEPIKNKTYLTAYPPKMKVLESVLKGMKTH 220 (297)
Q Consensus 141 ~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~Hfe~g~W~~GG~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~ 220 (297)
.+.|++.++.+.+.+.+.. ....|++-+..|..- .. +... ......++.++++.+ ..+
T Consensus 67 ~~~~~~~l~~li~~~~~~~--~~~~vi~~~~~p~~~---------~~-----~~~~----~~~~~~n~~l~~~a~--~~~ 124 (169)
T cd01828 67 DEDIVANYRTILEKLRKHF--PNIKIVVQSILPVGE---------LK-----SIPN----EQIEELNRQLAQLAQ--QEG 124 (169)
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCeEEEEecCCcCc---------cC-----cCCH----HHHHHHHHHHHHHHH--HCC
Confidence 3678888888877765432 345689988887651 00 0000 001123445566555 347
Q ss_pred eEEeecccccc
Q 037533 221 VTYLNITRLTD 231 (297)
Q Consensus 221 v~lLdiT~ls~ 231 (297)
+.++|+.....
T Consensus 125 ~~~id~~~~~~ 135 (169)
T cd01828 125 VTFLDLWAVFT 135 (169)
T ss_pred CEEEechhhhc
Confidence 89999987653
No 48
>TIGR00670 asp_carb_tr aspartate carbamoyltransferase. Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.
Probab=29.55 E-value=49 Score=31.43 Aligned_cols=28 Identities=29% Similarity=0.312 Sum_probs=23.9
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||-..-|-..||+=+++.
T Consensus 147 ~l~g~~va~vGD~~~~~v~~Sl~~~~a~ 174 (301)
T TIGR00670 147 RLDGLKIALVGDLKYGRTVHSLAEALTR 174 (301)
T ss_pred CCCCCEEEEEccCCCCcHHHHHHHHHHH
Confidence 4789999999997767889999888765
No 49
>PHA03298 envelope glycoprotein L; Provisional
Probab=28.30 E-value=36 Score=28.68 Aligned_cols=20 Identities=25% Similarity=0.345 Sum_probs=17.1
Q ss_pred EEecccch-----hHHHHHHHHHhh
Q 037533 12 FVGDSLNR-----NMWESLVCILKN 31 (297)
Q Consensus 12 FVGDSl~R-----nq~eSLlClL~~ 31 (297)
-.-||++| .|..||-||-+-
T Consensus 36 ~a~dsigrlidgaeqlvsmrcmtsf 60 (167)
T PHA03298 36 AACDSIGRLIDGAEQLVSMRCMTSF 60 (167)
T ss_pred ccccccccccccHHHHhhhhhhccc
Confidence 34699999 899999999875
No 50
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=28.15 E-value=30 Score=29.73 Aligned_cols=29 Identities=21% Similarity=0.383 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEEee
Q 037533 141 LEAFRRALTTWARWVDANVNPMKSMVFFRGY 171 (297)
Q Consensus 141 ~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~ 171 (297)
.+.|+..|+++++.+.+. .+ +..|++-++
T Consensus 101 ~~~~~~~l~~~i~~ir~~-~p-~~~Ivv~~~ 129 (204)
T cd04506 101 EETYQNNLKKIFKEIRKL-NP-DAPIFLVGL 129 (204)
T ss_pred HHHHHHHHHHHHHHHHHH-CC-CCeEEEEec
Confidence 457888999888877543 23 345655543
No 51
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=27.61 E-value=32 Score=29.43 Aligned_cols=94 Identities=10% Similarity=0.143 Sum_probs=49.3
Q ss_pred CCCCcEEEEccccccccccCCCCcccccCCccccccccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCCCCCCCC
Q 037533 102 YKGADIIIFNTGHWWTHDKTAEGKDYYQEGSHVYGELNVLEAFRRALTTWARWVDANVNPMKSMVFFRGYSASHFSGGQW 181 (297)
Q Consensus 102 ~~~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~Hfe~g~W 181 (297)
++..|+||+..|.-=. ...... .. ...+.|+..|+++.+.+.+. ...+++-|..|. ..|
T Consensus 63 ~~~pdlVii~~G~ND~----------~~~~~~--~~-~~~~~~~~nl~~ii~~~~~~----~~~~il~tp~~~----~~~ 121 (198)
T cd01821 63 IKPGDYVLIQFGHNDQ----------KPKDPE--YT-EPYTTYKEYLRRYIAEARAK----GATPILVTPVTR----RTF 121 (198)
T ss_pred CCCCCEEEEECCCCCC----------CCCCCC--CC-CcHHHHHHHHHHHHHHHHHC----CCeEEEECCccc----ccc
Confidence 3478999999886511 000000 01 12567888899887766432 345666554442 112
Q ss_pred CCCCCCCcccccCCCCcccCCCChhHHHHHHHHhccCceeEEeeccccc
Q 037533 182 NSGGACDHETEPIKNKTYLTAYPPKMKVLESVLKGMKTHVTYLNITRLT 230 (297)
Q Consensus 182 ~~GG~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~v~lLdiT~ls 230 (297)
..++..+ .......+++++++++. .+.++|+..++
T Consensus 122 ~~~~~~~------------~~~~~~~~~~~~~a~~~--~~~~vD~~~~~ 156 (198)
T cd01821 122 DEGGKVE------------DTLGDYPAAMRELAAEE--GVPLIDLNAAS 156 (198)
T ss_pred CCCCccc------------ccchhHHHHHHHHHHHh--CCCEEecHHHH
Confidence 2111000 11223345667666644 58889988765
No 52
>PRK14804 ornithine carbamoyltransferase; Provisional
Probab=25.65 E-value=58 Score=31.02 Aligned_cols=26 Identities=31% Similarity=0.464 Sum_probs=22.0
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+|||| .-|-..||+=+++.
T Consensus 150 ~l~g~~va~vGd--~~rv~~Sl~~~~~~ 175 (311)
T PRK14804 150 PLNQKQLTYIGV--HNNVVNSLIGITAA 175 (311)
T ss_pred CCCCCEEEEECC--CCcHHHHHHHHHHH
Confidence 478999999999 46889999888864
No 53
>PRK10113 cell division modulator; Provisional
Probab=24.99 E-value=40 Score=25.16 Aligned_cols=16 Identities=56% Similarity=0.978 Sum_probs=12.8
Q ss_pred cccCCcEEEE--ecccch
Q 037533 4 LLRGKRLVFV--GDSLNR 19 (297)
Q Consensus 4 ~~RgK~~~FV--GDSl~R 19 (297)
.||||-+||| |||.-|
T Consensus 38 ~LrGKYVAFvl~ge~FrR 55 (80)
T PRK10113 38 MLRGKYVAFVLMGESFLR 55 (80)
T ss_pred eeccceEEEEEechhhcc
Confidence 4899999997 777665
No 54
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=23.79 E-value=38 Score=28.22 Aligned_cols=31 Identities=13% Similarity=0.194 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEEeecC
Q 037533 141 LEAFRRALTTWARWVDANVNPMKSMVFFRGYSA 173 (297)
Q Consensus 141 ~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP 173 (297)
.+.|+..++++.+-+.+.. + ++.+++-+..|
T Consensus 69 ~~~~~~~~~~lv~~i~~~~-~-~~~iil~~~~p 99 (171)
T cd04502 69 PEEVLRDFRELVNRIRAKL-P-DTPIAIISIKP 99 (171)
T ss_pred HHHHHHHHHHHHHHHHHHC-C-CCcEEEEEecC
Confidence 5668888888877765543 2 34577777655
No 55
>PF12026 DUF3513: Domain of unknown function (DUF3513); InterPro: IPR021901 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is typically between 192 to 218 amino acids in length. This domain is found associated with PF00018 from PFAM, PF08824 from PFAM. This domain has a conserved QPP sequence motif. ; PDB: 3T6G_D 1X27_N.
Probab=23.71 E-value=3.7 Score=37.15 Aligned_cols=16 Identities=50% Similarity=0.951 Sum_probs=12.6
Q ss_pred ccCCcEEEEecccchh
Q 037533 5 LRGKRLVFVGDSLNRN 20 (297)
Q Consensus 5 ~RgK~~~FVGDSl~Rn 20 (297)
|-|-+++||||+|.|+
T Consensus 132 l~ahkLVfiGDTl~r~ 147 (210)
T PF12026_consen 132 LSAHKLVFIGDTLCRE 147 (210)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred EEeeeeeeeccHHHHH
Confidence 4455788999999985
No 56
>COG0180 TrpS Tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=23.58 E-value=65 Score=30.96 Aligned_cols=37 Identities=24% Similarity=0.377 Sum_probs=31.3
Q ss_pred HHHHHHHH-HHHHHHHhhcCCCcceEEEEeecCCCCCC
Q 037533 142 EAFRRALT-TWARWVDANVNPMKSMVFFRGYSASHFSG 178 (297)
Q Consensus 142 ~ay~~al~-t~~~~i~~~~~~~~~~vf~Rt~SP~Hfe~ 178 (297)
+..+.+.+ .++.||...+||.++.+|+.|--|.|.|-
T Consensus 59 ~~l~~~~~e~~a~~LA~GiDP~k~~if~QS~v~e~~eL 96 (314)
T COG0180 59 EDLRQATREVAADYLAVGLDPEKSTIFLQSEVPEHAEL 96 (314)
T ss_pred HHHHHHHHHHHHHHHHhccCccccEEEEccCchHHHHH
Confidence 66777644 67889988899999999999999999873
No 57
>PRK13376 pyrB bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit; Provisional
Probab=22.66 E-value=73 Score=32.82 Aligned_cols=28 Identities=29% Similarity=0.084 Sum_probs=22.8
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.++|++|+||||-..-|-..||+-+|+.
T Consensus 171 ~l~glkVa~vGD~~~~rva~Sl~~~l~~ 198 (525)
T PRK13376 171 DNSFIHIALVGDLLHGRTVHSKVNGLKI 198 (525)
T ss_pred CcCCCEEEEECCCCCCcHHHHHHHHHHh
Confidence 4789999999998766778888887764
No 58
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=22.55 E-value=37 Score=28.01 Aligned_cols=24 Identities=17% Similarity=0.130 Sum_probs=15.2
Q ss_pred HHHHHHHHhccCceeEEeecccccc
Q 037533 207 MKVLESVLKGMKTHVTYLNITRLTD 231 (297)
Q Consensus 207 ~~~v~~~~~~~~~~v~lLdiT~ls~ 231 (297)
++.+++++++. ..+.++|....+.
T Consensus 98 n~~~~~~a~~~-~~v~~id~~~~~~ 121 (150)
T cd01840 98 NAYLLDAAKKY-KNVTIIDWYKAAK 121 (150)
T ss_pred HHHHHHHHHHC-CCcEEecHHHHhc
Confidence 45556655532 2699999876543
No 59
>PF05515 Viral_NABP: Viral nucleic acid binding ; InterPro: IPR008891 This family is common to ssRNA positive-strand viruses and are commonly described as nucleic acid binding proteins (NABP).
Probab=21.87 E-value=98 Score=25.77 Aligned_cols=29 Identities=21% Similarity=0.445 Sum_probs=21.8
Q ss_pred CCcccccCCCcchHHHHHHHHHHHhhhhh
Q 037533 258 QDCSHWCLPGVPDAWNELFYAELIIKENK 286 (297)
Q Consensus 258 ~DC~HWCLPG~~D~WNelL~~~L~~~~~~ 286 (297)
-=|||.|=||+|--=-.+++.........
T Consensus 9 LccL~f~~p~LP~Di~~~I~~~~~~~~k~ 37 (124)
T PF05515_consen 9 LCCLHFSRPGLPTDIRILIFSLVVNECKL 37 (124)
T ss_pred eeeeeecCCCCCHHHHHHHHHHHHHHHHH
Confidence 47999999999977777777776554433
No 60
>PRK02255 putrescine carbamoyltransferase; Provisional
Probab=21.51 E-value=81 Score=30.51 Aligned_cols=26 Identities=35% Similarity=0.516 Sum_probs=21.5
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||- .|-..||+-++..
T Consensus 151 ~l~glkv~~vGD~--~~v~~Sl~~~~~~ 176 (338)
T PRK02255 151 KLEDCKVVFVGDA--TQVCVSLMFIATK 176 (338)
T ss_pred CCCCCEEEEECCC--chHHHHHHHHHHh
Confidence 4789999999994 3789999888864
No 61
>PRK13556 azoreductase; Provisional
Probab=20.95 E-value=85 Score=27.59 Aligned_cols=26 Identities=19% Similarity=0.358 Sum_probs=20.8
Q ss_pred cccccchhcCCCCcEEEEcccccccc
Q 037533 93 DLVGRSSDQYKGADIIIFNTGHWWTH 118 (297)
Q Consensus 93 D~~~~~~~~~~~~DvlV~ntGhWw~~ 118 (297)
+..++....+..+|.|||.+=-||..
T Consensus 78 ~~~~~~~~~l~~AD~iVi~~P~yn~~ 103 (208)
T PRK13556 78 AVADKYLNQFLEADKVVFAFPLWNFT 103 (208)
T ss_pred HHHHHHHHHHHHCCEEEEeccccccC
Confidence 33445578899999999999999874
Done!