Query 037533
Match_columns 297
No_of_seqs 130 out of 722
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 22:54:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037533.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037533hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h08_A Putative hydrolase; GDS 93.4 0.17 5.7E-06 42.1 6.7 51 103-175 73-123 (200)
2 3hp4_A GDSL-esterase; psychrot 77.6 1 3.5E-05 36.4 2.2 46 104-171 66-111 (185)
3 4hf7_A Putative acylhydrolase; 72.0 0.98 3.3E-05 38.0 0.6 15 6-20 25-39 (209)
4 3rjt_A Lipolytic protein G-D-S 66.7 1.6 5.5E-05 35.7 0.9 26 141-170 112-137 (216)
5 3mil_A Isoamyl acetate-hydroly 60.9 2 7E-05 35.9 0.4 54 103-174 71-124 (240)
6 1ivn_A Thioesterase I; hydrola 59.7 2.1 7.2E-05 34.8 0.3 15 7-21 1-15 (190)
7 3dc7_A Putative uncharacterize 58.2 4.2 0.00014 34.1 1.9 17 4-20 18-34 (232)
8 1yzf_A Lipase/acylhydrolase; s 57.9 2.2 7.6E-05 34.2 0.1 50 103-174 66-115 (195)
9 3q98_A Transcarbamylase; rossm 57.3 7.2 0.00025 37.2 3.6 29 3-31 187-220 (399)
10 3bzw_A Putative lipase; protei 56.8 4.7 0.00016 35.2 2.1 18 3-20 22-39 (274)
11 2q0q_A ARYL esterase; SGNH hyd 53.1 3 0.0001 34.4 0.1 52 103-172 82-140 (216)
12 3grf_A Ornithine carbamoyltran 53.1 7.9 0.00027 35.9 3.0 27 4-31 158-184 (328)
13 2yfk_A Aspartate/ornithine car 51.4 11 0.00036 36.3 3.7 28 4-31 185-217 (418)
14 3tpf_A Otcase, ornithine carba 51.3 9 0.00031 35.2 3.1 26 4-31 142-168 (307)
15 1fll_X B-cell surface antigen 51.2 8.1 0.00028 22.3 1.7 10 257-266 6-15 (26)
16 2hsj_A Putative platelet activ 50.1 4.9 0.00017 33.0 1.0 52 104-175 85-136 (214)
17 4f2g_A Otcase 1, ornithine car 49.8 9 0.00031 35.2 2.8 26 4-31 151-176 (309)
18 3dci_A Arylesterase; SGNH_hydr 49.5 3.7 0.00013 34.8 0.1 56 102-173 99-157 (232)
19 3r7f_A Aspartate carbamoyltran 49.3 9.9 0.00034 34.9 3.0 28 4-31 144-171 (304)
20 1vjg_A Putative lipase from th 46.8 3.8 0.00013 34.1 -0.2 53 103-174 87-140 (218)
21 4amu_A Ornithine carbamoyltran 46.3 12 0.0004 35.3 3.1 27 4-31 177-203 (365)
22 1fxw_F Alpha2, platelet-activa 44.5 7 0.00024 32.9 1.1 50 104-175 94-143 (229)
23 3sds_A Ornithine carbamoyltran 43.8 13 0.00045 34.8 3.0 25 5-31 186-210 (353)
24 3p94_A GDSL-like lipase; serin 42.8 6.2 0.00021 32.0 0.5 31 141-175 96-126 (204)
25 1es9_A PAF-AH, platelet-activa 42.7 7.5 0.00026 32.7 1.0 49 104-174 93-141 (232)
26 3csu_A Protein (aspartate carb 41.4 15 0.00052 33.7 3.0 28 4-31 151-178 (310)
27 2waa_A Acetyl esterase, xylan 40.5 8.9 0.0003 35.1 1.2 15 6-20 131-145 (347)
28 4ekn_B Aspartate carbamoyltran 40.1 17 0.00056 33.4 3.0 28 4-31 148-175 (306)
29 3gd5_A Otcase, ornithine carba 39.9 16 0.00054 33.8 2.8 26 4-31 154-179 (323)
30 4ep1_A Otcase, ornithine carba 39.6 16 0.00055 34.1 2.8 26 4-31 176-201 (340)
31 2vpt_A Lipolytic enzyme; ester 39.3 6 0.00021 32.9 -0.1 13 8-20 6-18 (215)
32 1pg5_A Aspartate carbamoyltran 39.2 20 0.00069 32.7 3.4 28 4-31 146-173 (299)
33 4a8t_A Putrescine carbamoyltra 38.4 16 0.00055 34.0 2.7 26 4-31 172-197 (339)
34 4a8p_A Putrescine carbamoyltra 36.6 18 0.00061 33.9 2.7 26 4-31 150-175 (355)
35 2w9x_A AXE2A, CJCE2B, putative 36.4 10 0.00034 35.0 0.9 28 141-170 266-293 (366)
36 3skv_A SSFX3; jelly roll, GDSL 34.2 16 0.00053 34.4 1.9 14 7-20 185-198 (385)
37 2wao_A Endoglucanase E; plant 33.7 9.8 0.00033 34.6 0.3 15 6-20 121-135 (341)
38 2o14_A Hypothetical protein YX 32.7 16 0.00055 33.9 1.7 70 141-231 251-320 (375)
39 1vcc_A DNA topoisomerase I; DN 32.0 10 0.00035 27.5 0.1 15 8-22 55-70 (77)
40 1oth_A Protein (ornithine tran 31.5 22 0.00075 32.8 2.3 26 4-31 152-177 (321)
41 1vlv_A Otcase, ornithine carba 29.9 30 0.001 32.0 2.9 27 4-31 164-190 (325)
42 1k7c_A Rhamnogalacturonan acet 29.8 17 0.00059 30.8 1.2 67 142-231 108-174 (233)
43 1ml4_A Aspartate transcarbamoy 29.0 28 0.00097 31.8 2.6 28 4-31 152-179 (308)
44 3d6n_B Aspartate carbamoyltran 28.4 34 0.0012 31.1 3.0 28 4-31 143-170 (291)
45 2ef0_A Ornithine carbamoyltran 25.2 40 0.0014 30.8 2.8 26 4-31 151-176 (301)
46 1pvv_A Otcase, ornithine carba 23.9 43 0.0015 30.7 2.8 26 4-31 152-177 (315)
47 3r6w_A FMN-dependent NADH-azor 23.5 18 0.00062 30.3 0.2 22 97-118 80-101 (212)
48 1dxh_A Ornithine carbamoyltran 23.5 42 0.0014 31.1 2.7 27 4-31 152-178 (335)
49 1duv_G Octase-1, ornithine tra 22.6 49 0.0017 30.6 3.0 27 4-31 152-178 (333)
50 2i6u_A Otcase, ornithine carba 22.0 51 0.0018 30.1 2.9 27 4-31 145-171 (307)
51 4h31_A Otcase, ornithine carba 21.7 51 0.0017 30.7 2.9 27 4-31 178-204 (358)
52 2w37_A Ornithine carbamoyltran 21.7 52 0.0018 30.8 2.9 27 4-31 173-199 (359)
53 2yvc_D Neprilysin; protein-pep 20.2 24 0.00083 20.0 0.2 13 223-235 6-18 (26)
No 1
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=93.37 E-value=0.17 Score=42.15 Aligned_cols=51 Identities=14% Similarity=0.230 Sum_probs=33.5
Q ss_pred CCCcEEEEccccccccccCCCCcccccCCccccccccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCC
Q 037533 103 KGADIIIFNTGHWWTHDKTAEGKDYYQEGSHVYGELNVLEAFRRALTTWARWVDANVNPMKSMVFFRGYSASH 175 (297)
Q Consensus 103 ~~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~H 175 (297)
...|+|||+.|..=. . ...+.|+..|+.+.+.+.+.. .++.+++-+..|-.
T Consensus 73 ~~pd~Vvi~~G~ND~-------------------~-~~~~~~~~~l~~ii~~l~~~~--p~~~ii~~~~~P~~ 123 (200)
T 4h08_A 73 TKFDVIHFNNGLHGF-------------------D-YTEEEYDKSFPKLIKIIRKYA--PKAKLIWANTTPVR 123 (200)
T ss_dssp SCCSEEEECCCSSCT-------------------T-SCHHHHHHHHHHHHHHHHHHC--TTCEEEEECCCCCE
T ss_pred CCCCeEEEEeeeCCC-------------------C-CCHHHHHHHHHHHHHHHhhhC--CCccEEEeccCCCc
Confidence 457999999886410 0 113568888888877765442 24568888887754
No 2
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=77.64 E-value=1 Score=36.38 Aligned_cols=46 Identities=15% Similarity=0.187 Sum_probs=27.8
Q ss_pred CCcEEEEccccccccccCCCCcccccCCccccccccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEee
Q 037533 104 GADIIIFNTGHWWTHDKTAEGKDYYQEGSHVYGELNVLEAFRRALTTWARWVDANVNPMKSMVFFRGY 171 (297)
Q Consensus 104 ~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~ 171 (297)
..|+||+..|.- +.+. + ...+.|+..++.+.+.+.+. ...|++-++
T Consensus 66 ~pd~vvi~~G~N----------D~~~-~-------~~~~~~~~~~~~~i~~~~~~----~~~vvl~~~ 111 (185)
T 3hp4_A 66 EPTHVLIELGAN----------DGLR-G-------FPVKKMQTNLTALVKKSQAA----NAMTALMEI 111 (185)
T ss_dssp CCSEEEEECCHH----------HHHT-T-------CCHHHHHHHHHHHHHHHHHT----TCEEEEECC
T ss_pred CCCEEEEEeecc----------cCCC-C-------cCHHHHHHHHHHHHHHHHHc----CCeEEEEeC
Confidence 569999988853 1111 1 01367888888888777554 244566553
No 3
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=72.01 E-value=0.98 Score=37.97 Aligned_cols=15 Identities=33% Similarity=0.824 Sum_probs=12.9
Q ss_pred cCCcEEEEecccchh
Q 037533 6 RGKRLVFVGDSLNRN 20 (297)
Q Consensus 6 RgK~~~FVGDSl~Rn 20 (297)
.+++|+|+||||++.
T Consensus 25 ~~~~Iv~~GDSit~g 39 (209)
T 4hf7_A 25 KEKRVVFMGNXITEG 39 (209)
T ss_dssp GGCCEEEEESHHHHH
T ss_pred CCCeEEEECcHHHhC
Confidence 467999999999974
No 4
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=66.72 E-value=1.6 Score=35.71 Aligned_cols=26 Identities=12% Similarity=0.263 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEEe
Q 037533 141 LEAFRRALTTWARWVDANVNPMKSMVFFRG 170 (297)
Q Consensus 141 ~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt 170 (297)
.+.|+..|+.+.+.+.+. ...+++-|
T Consensus 112 ~~~~~~~l~~~i~~~~~~----~~~vil~~ 137 (216)
T 3rjt_A 112 IDEYRDTLRHLVATTKPR----VREMFLLS 137 (216)
T ss_dssp HHHHHHHHHHHHHHHGGG----SSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhc----CCeEEEEC
Confidence 567888888888776544 35566665
No 5
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=60.91 E-value=2 Score=35.90 Aligned_cols=54 Identities=9% Similarity=-0.010 Sum_probs=31.4
Q ss_pred CCCcEEEEccccccccccCCCCcccccCCccccccccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCC
Q 037533 103 KGADIIIFNTGHWWTHDKTAEGKDYYQEGSHVYGELNVLEAFRRALTTWARWVDANVNPMKSMVFFRGYSAS 174 (297)
Q Consensus 103 ~~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~ 174 (297)
...|++||..|.== ....+. .. ...+.|+..|+.+.+-+.+. ...|++-+..|.
T Consensus 71 ~~pd~vvi~~G~ND----------~~~~~~---~~-~~~~~~~~~l~~~i~~~~~~----~~~vil~~~~p~ 124 (240)
T 3mil_A 71 SNIVMATIFLGAND----------ACSAGP---QS-VPLPEFIDNIRQMVSLMKSY----HIRPIIIGPGLV 124 (240)
T ss_dssp CCEEEEEEECCTTT----------TSSSST---TC-CCHHHHHHHHHHHHHHHHHT----TCEEEEECCCCC
T ss_pred CCCCEEEEEeecCc----------CCccCC---CC-CCHHHHHHHHHHHHHHHHHc----CCeEEEEcCCCC
Confidence 57899999888521 110000 01 12457788888877766543 246788776553
No 6
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=59.71 E-value=2.1 Score=34.83 Aligned_cols=15 Identities=33% Similarity=0.609 Sum_probs=12.6
Q ss_pred CCcEEEEecccchhH
Q 037533 7 GKRLVFVGDSLNRNM 21 (297)
Q Consensus 7 gK~~~FVGDSl~Rnq 21 (297)
.|+|+|+|||++...
T Consensus 1 ~~~i~~~GDSit~g~ 15 (190)
T 1ivn_A 1 ADTLLILGDSLSAGY 15 (190)
T ss_dssp CEEEEEEECHHHHCS
T ss_pred CCcEEEEecCcccCC
Confidence 379999999998753
No 7
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=58.22 E-value=4.2 Score=34.15 Aligned_cols=17 Identities=35% Similarity=0.503 Sum_probs=14.3
Q ss_pred cccCCcEEEEecccchh
Q 037533 4 LLRGKRLVFVGDSLNRN 20 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rn 20 (297)
.+..++|+|+|||++..
T Consensus 18 ~~~~~~i~~lGDSit~G 34 (232)
T 3dc7_A 18 HVSFKRPAWLGDSITAN 34 (232)
T ss_dssp CBCCSSEEEEESTTTST
T ss_pred CCCcceEEEEccccccc
Confidence 45678999999999875
No 8
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=57.89 E-value=2.2 Score=34.23 Aligned_cols=50 Identities=16% Similarity=0.146 Sum_probs=29.9
Q ss_pred CCCcEEEEccccccccccCCCCcccccCCccccccccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCC
Q 037533 103 KGADIIIFNTGHWWTHDKTAEGKDYYQEGSHVYGELNVLEAFRRALTTWARWVDANVNPMKSMVFFRGYSAS 174 (297)
Q Consensus 103 ~~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~ 174 (297)
...|++|+..|.- ++...+ . ...+.|+..|+.+.+.+. ...+++-+..|.
T Consensus 66 ~~pd~vvi~~G~N----------D~~~~~-----~-~~~~~~~~~l~~~i~~~~------~~~vi~~~~~p~ 115 (195)
T 1yzf_A 66 EKPDEVVIFFGAN----------DASLDR-----N-ITVATFRENLETMIHEIG------SEKVILITPPYA 115 (195)
T ss_dssp GCCSEEEEECCTT----------TTCTTS-----C-CCHHHHHHHHHHHHHHHC------GGGEEEECCCCC
T ss_pred cCCCEEEEEeecc----------ccCccC-----C-CCHHHHHHHHHHHHHHhc------CCEEEEEcCCCC
Confidence 4679999988853 111110 0 124567777877766552 456778777765
No 9
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=57.27 E-value=7.2 Score=37.22 Aligned_cols=29 Identities=17% Similarity=0.401 Sum_probs=23.3
Q ss_pred ccccCCcEEEEec---ccch--hHHHHHHHHHhh
Q 037533 3 ELLRGKRLVFVGD---SLNR--NMWESLVCILKN 31 (297)
Q Consensus 3 ~~~RgK~~~FVGD---Sl~R--nq~eSLlClL~~ 31 (297)
+.++|++|+|||| |.+| |...||+.++..
T Consensus 187 ~~l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~ 220 (399)
T 3q98_A 187 ENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTR 220 (399)
T ss_dssp GGGTTCEEEEECCCCSSCCCCTHHHHHHHHHHGG
T ss_pred cccCCCEEEEEEecccccCcchHHHHHHHHHHHH
Confidence 3478999999998 3455 788999999875
No 10
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9
Probab=56.82 E-value=4.7 Score=35.16 Aligned_cols=18 Identities=28% Similarity=0.625 Sum_probs=15.1
Q ss_pred ccccCCcEEEEecccchh
Q 037533 3 ELLRGKRLVFVGDSLNRN 20 (297)
Q Consensus 3 ~~~RgK~~~FVGDSl~Rn 20 (297)
....+++|+|+||||+..
T Consensus 22 ~~~~~~~iv~lGDSiT~G 39 (274)
T 3bzw_A 22 HPWQGKKVGYIGDSITDP 39 (274)
T ss_dssp CTTTTCEEEEEESTTTCT
T ss_pred ccCCCCEEEEEecCcccC
Confidence 456789999999999865
No 11
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=53.14 E-value=3 Score=34.36 Aligned_cols=52 Identities=13% Similarity=0.058 Sum_probs=29.3
Q ss_pred CCCcEEEEccccccccccCCCCccccc-CCccccccccHHHHHHHHHHHHHHHHHhhcC------CCcceEEEEeec
Q 037533 103 KGADIIIFNTGHWWTHDKTAEGKDYYQ-EGSHVYGELNVLEAFRRALTTWARWVDANVN------PMKSMVFFRGYS 172 (297)
Q Consensus 103 ~~~DvlV~ntGhWw~~~~~~~~~~~~~-~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~------~~~~~vf~Rt~S 172 (297)
...|+|||..|.- +... .+ ...+.|+..++.+.+.+.+.-. | ++.|++-+..
T Consensus 82 ~p~d~vvi~~G~N----------D~~~~~~-------~~~~~~~~~l~~li~~~~~~~~~~~~~~P-~~~iil~~~p 140 (216)
T 2q0q_A 82 LPLDLVIIMLGTN----------DTKAYFR-------RTPLDIALGMSVLVTQVLTSAGGVGTTYP-APKVLVVSPP 140 (216)
T ss_dssp CSCSEEEEECCTG----------GGSGGGC-------CCHHHHHHHHHHHHHHHHTCTTTTTBCCC-CCEEEEEECC
T ss_pred CCCCEEEEEecCc----------ccchhcC-------CCHHHHHHHHHHHHHHHHHhcccccccCC-CCeEEEEeCC
Confidence 3469999988864 1111 01 1145778888888777654320 2 2456666543
No 12
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=53.11 E-value=7.9 Score=35.92 Aligned_cols=27 Identities=26% Similarity=0.353 Sum_probs=23.9
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||-.+ |-..||+-++..
T Consensus 158 ~l~gl~va~vGD~~~-~va~Sl~~~~~~ 184 (328)
T 3grf_A 158 GFKGIKFAYCGDSMN-NVTYDLMRGCAL 184 (328)
T ss_dssp TGGGCCEEEESCCSS-HHHHHHHHHHHH
T ss_pred ccCCcEEEEeCCCCc-chHHHHHHHHHH
Confidence 689999999999766 799999999875
No 13
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=51.38 E-value=11 Score=36.29 Aligned_cols=28 Identities=18% Similarity=0.364 Sum_probs=23.7
Q ss_pred cccCCcEEEEec---ccch--hHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGD---SLNR--NMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGD---Sl~R--nq~eSLlClL~~ 31 (297)
.++|++|++||| |.+| |...||+-++..
T Consensus 185 ~l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~ 217 (418)
T 2yfk_A 185 NLKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTR 217 (418)
T ss_dssp GGTTCEEEEECCCCSSSCCCSHHHHHHHHHHGG
T ss_pred ccCCCEEEEEeccccccCccchHHHHHHHHHHH
Confidence 478999999998 4567 899999999875
No 14
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=51.33 E-value=9 Score=35.20 Aligned_cols=26 Identities=23% Similarity=0.373 Sum_probs=22.4
Q ss_pred ccc-CCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLR-GKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~R-gK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+. |++|+|||| ..|-..||+.+++.
T Consensus 142 ~l~~gl~va~vGD--~~~va~Sl~~~~~~ 168 (307)
T 3tpf_A 142 MQNGIAKVAFIGD--SNNMCNSWLITAAI 168 (307)
T ss_dssp CGGGCCEEEEESC--SSHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEcC--CCccHHHHHHHHHH
Confidence 467 999999999 35799999999875
No 15
>1fll_X B-cell surface antigen CD40; TRAF3 with CD40 peptide, TNF signaling, apoptosis; 3.50A {Homo sapiens}
Probab=51.16 E-value=8.1 Score=22.29 Aligned_cols=10 Identities=30% Similarity=0.328 Sum_probs=9.1
Q ss_pred CCCcccccCC
Q 037533 257 YQDCSHWCLP 266 (297)
Q Consensus 257 ~~DC~HWCLP 266 (297)
.+|-+|||+|
T Consensus 6 vqeTl~~~qP 15 (26)
T 1fll_X 6 VQETLHGSQP 15 (26)
T ss_dssp CCCCCCCSSS
T ss_pred hhHHhhcCcc
Confidence 5899999998
No 16
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=50.07 E-value=4.9 Score=33.01 Aligned_cols=52 Identities=13% Similarity=0.102 Sum_probs=31.9
Q ss_pred CCcEEEEccccccccccCCCCcccccCCccccccccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCC
Q 037533 104 GADIIIFNTGHWWTHDKTAEGKDYYQEGSHVYGELNVLEAFRRALTTWARWVDANVNPMKSMVFFRGYSASH 175 (297)
Q Consensus 104 ~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~H 175 (297)
..|++||..|.- +... + . ..+.|+..++.+.+.+.+.. | ...|++-+..|..
T Consensus 85 ~pd~vvi~~G~N----------D~~~-~------~-~~~~~~~~l~~~i~~l~~~~-p-~~~iil~~~~p~~ 136 (214)
T 2hsj_A 85 AVDKIFLLIGTN----------DIGK-D------V-PVNEALNNLEAIIQSVARDY-P-LTEIKLLSILPVN 136 (214)
T ss_dssp CCCEEEEECCHH----------HHHT-T------C-CHHHHHHHHHHHHHHHHHHC-T-TCEEEEECCCCCC
T ss_pred CCCEEEEEEecC----------cCCc-C------C-CHHHHHHHHHHHHHHHHHhC-C-CCeEEEEecCCCC
Confidence 469999987752 1111 1 1 13567777887777765542 3 3568888887754
No 17
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=49.84 E-value=9 Score=35.25 Aligned_cols=26 Identities=31% Similarity=0.520 Sum_probs=22.5
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||- -|-..||+.++..
T Consensus 151 ~l~glkva~vGD~--~~va~Sl~~~~~~ 176 (309)
T 4f2g_A 151 PIRGKTVAWVGDA--NNMLYTWIQAARI 176 (309)
T ss_dssp CCTTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCC--cchHHHHHHHHHH
Confidence 4789999999993 5699999999975
No 18
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=49.51 E-value=3.7 Score=34.77 Aligned_cols=56 Identities=14% Similarity=0.069 Sum_probs=31.0
Q ss_pred CCCCcEEEEccccccccccCCCCcccccCCccccccccHHHHHHHHHHHHHHHHHhhcCC---CcceEEEEeecC
Q 037533 102 YKGADIIIFNTGHWWTHDKTAEGKDYYQEGSHVYGELNVLEAFRRALTTWARWVDANVNP---MKSMVFFRGYSA 173 (297)
Q Consensus 102 ~~~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~~---~~~~vf~Rt~SP 173 (297)
...+|+|||..|.= +..... . ...+.|+..|+.+++.+.+.... ..+.|++-+..|
T Consensus 99 ~~p~d~VvI~~GtN----------D~~~~~-----~-~~~~~~~~~l~~li~~ir~~~~~~~~p~~~iil~~p~~ 157 (232)
T 3dci_A 99 HMPLDLVIIMLGTN----------DIKPVH-----G-GRAEAAVSGMRRLAQIVETFIYKPREAVPKLLIVAPPP 157 (232)
T ss_dssp HCSCSEEEEECCTT----------TTSGGG-----T-SSHHHHHHHHHHHHHHHHHCCCSSTTCCCEEEEEECCC
T ss_pred CCCCCEEEEEeccC----------CCcccc-----C-CCHHHHHHHHHHHHHHHHHhcccccCCCCeEEEEeCCC
Confidence 34569999988842 111100 0 02467888888888777554210 235566666444
No 19
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=49.26 E-value=9.9 Score=34.91 Aligned_cols=28 Identities=18% Similarity=0.221 Sum_probs=24.5
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||-..-|...||+.++..
T Consensus 144 ~l~glkva~vGD~~~~rva~Sl~~~~~~ 171 (304)
T 3r7f_A 144 TFKGLTVSIHGDIKHSRVARSNAEVLTR 171 (304)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCcchHHHHHHHHHH
Confidence 4789999999997767899999999875
No 20
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=46.83 E-value=3.8 Score=34.05 Aligned_cols=53 Identities=9% Similarity=0.033 Sum_probs=31.0
Q ss_pred CCCcEEEEccccccccccCCCCcccc-cCCccccccccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCC
Q 037533 103 KGADIIIFNTGHWWTHDKTAEGKDYY-QEGSHVYGELNVLEAFRRALTTWARWVDANVNPMKSMVFFRGYSAS 174 (297)
Q Consensus 103 ~~~DvlV~ntGhWw~~~~~~~~~~~~-~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~ 174 (297)
...|+|||..|.= +.. ..+. .....+.|+..++.+.+.+.+. ..|++-+..|.
T Consensus 87 ~~pd~vvi~~G~N----------D~~~~~~~----~~~~~~~~~~~l~~li~~l~~~-----~~iil~~~~p~ 140 (218)
T 1vjg_A 87 EYNSLVVFSFGLN----------DTTLENGK----PRVSIAETIKNTREILTQAKKL-----YPVLMISPAPY 140 (218)
T ss_dssp TSEEEEEEECCHH----------HHCEETTE----ESSCHHHHHHHHHHHHHHHHHH-----SCEEEECCCCC
T ss_pred CCCCEEEEEecCC----------cchhhccc----ccCCHHHHHHHHHHHHHHHHHh-----CcEEEECCCCc
Confidence 3679999998852 111 0000 0112456778888777777555 45777777554
No 21
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=46.29 E-value=12 Score=35.31 Aligned_cols=27 Identities=33% Similarity=0.361 Sum_probs=23.3
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.++|++|+||||-.+ |...||+.++..
T Consensus 177 ~l~glkva~vGD~~n-nva~Sl~~~~~~ 203 (365)
T 4amu_A 177 NLKNKKIVFIGDYKN-NVGVSTMIGAAF 203 (365)
T ss_dssp SCTTCEEEEESSTTS-HHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCc-chHHHHHHHHHH
Confidence 478999999999766 689999999875
No 22
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=44.53 E-value=7 Score=32.92 Aligned_cols=50 Identities=12% Similarity=0.232 Sum_probs=30.4
Q ss_pred CCcEEEEccccccccccCCCCcccccCCccccccccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCC
Q 037533 104 GADIIIFNTGHWWTHDKTAEGKDYYQEGSHVYGELNVLEAFRRALTTWARWVDANVNPMKSMVFFRGYSASH 175 (297)
Q Consensus 104 ~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~H 175 (297)
..|+|||..|.- ++ | ...+.|...|+.+.+.+.+.. | .+.|++-+..|..
T Consensus 94 ~pd~vvi~~G~N----------D~---~-------~~~~~~~~~l~~~i~~l~~~~-p-~~~iil~~~~p~~ 143 (229)
T 1fxw_F 94 KPKVIVVWVGTN----------NH---E-------NTAEEVAGGIEAIVQLINTRQ-P-QAKIIVLGLLPRG 143 (229)
T ss_dssp CCSEEEEECCTT----------CT---T-------SCHHHHHHHHHHHHHHHHHHC-T-TCEEEEECCCCCS
T ss_pred CCCEEEEEEecC----------CC---C-------CCHHHHHHHHHHHHHHHHHHC-C-CCeEEEEeCCCCC
Confidence 469999977653 11 1 013567777777777765542 3 3567777776643
No 23
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=43.76 E-value=13 Score=34.80 Aligned_cols=25 Identities=28% Similarity=0.500 Sum_probs=21.9
Q ss_pred ccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 5 LRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 5 ~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
+.|++|+||||- .|-..||+-+|..
T Consensus 186 l~glkva~vGD~--~nva~Sl~~~l~~ 210 (353)
T 3sds_A 186 LEGLKIAWVGDA--NNVLFDLAIAATK 210 (353)
T ss_dssp CTTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred cCCCEEEEECCC--chHHHHHHHHHHH
Confidence 589999999996 4799999998875
No 24
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=42.83 E-value=6.2 Score=31.97 Aligned_cols=31 Identities=23% Similarity=0.159 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCC
Q 037533 141 LEAFRRALTTWARWVDANVNPMKSMVFFRGYSASH 175 (297)
Q Consensus 141 ~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~H 175 (297)
.+.|+..++.+.+.+.+ + ...+++-+..|..
T Consensus 96 ~~~~~~~~~~~i~~~~~---~-~~~vil~~~~p~~ 126 (204)
T 3p94_A 96 LENVFGNLVSMAELAKA---N-HIKVIFCSVLPAY 126 (204)
T ss_dssp HHHHHHHHHHHHHHHHH---T-TCEEEEECCCCCS
T ss_pred HHHHHHHHHHHHHHHHh---C-CCeEEEEeCCCCC
Confidence 45677777777766643 2 3568888877754
No 25
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=42.66 E-value=7.5 Score=32.66 Aligned_cols=49 Identities=14% Similarity=0.203 Sum_probs=31.0
Q ss_pred CCcEEEEccccccccccCCCCcccccCCccccccccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCC
Q 037533 104 GADIIIFNTGHWWTHDKTAEGKDYYQEGSHVYGELNVLEAFRRALTTWARWVDANVNPMKSMVFFRGYSAS 174 (297)
Q Consensus 104 ~~DvlV~ntGhWw~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~ 174 (297)
..|+|||..|.- +.. ...+.|...++.+.+.+.+.. + .+.|++-+..|.
T Consensus 93 ~pd~vvi~~G~N----------D~~----------~~~~~~~~~l~~~i~~l~~~~-p-~~~ii~~~~~p~ 141 (232)
T 1es9_A 93 RPKIVVVWVGTN----------NHG----------HTAEQVTGGIKAIVQLVNERQ-P-QARVVVLGLLPR 141 (232)
T ss_dssp CCSEEEEECCTT----------CTT----------SCHHHHHHHHHHHHHHHHHHS-T-TCEEEEECCCCC
T ss_pred CCCEEEEEeecC----------CCC----------CCHHHHHHHHHHHHHHHHHHC-C-CCeEEEecCCCC
Confidence 579999987743 111 113567777777777765542 2 456888887764
No 26
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=41.45 E-value=15 Score=33.71 Aligned_cols=28 Identities=25% Similarity=0.203 Sum_probs=24.3
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||-..-|...||+-++..
T Consensus 151 ~l~gl~va~vGD~~~~rva~Sl~~~~~~ 178 (310)
T 3csu_A 151 RLDNLHVAMVGDLKYGRTVHSLTQALAK 178 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHHHT
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHh
Confidence 5789999999996666899999999975
No 27
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus}
Probab=40.55 E-value=8.9 Score=35.08 Aligned_cols=15 Identities=20% Similarity=0.534 Sum_probs=12.9
Q ss_pred cCCcEEEEecccchh
Q 037533 6 RGKRLVFVGDSLNRN 20 (297)
Q Consensus 6 RgK~~~FVGDSl~Rn 20 (297)
..++|+|+||||+-.
T Consensus 131 ~~~~I~~iGDSIT~G 145 (347)
T 2waa_A 131 PQRKILVLGDSVTCG 145 (347)
T ss_dssp CSEEEEEEESTTTTT
T ss_pred CCceEEEeecccccc
Confidence 567999999999964
No 28
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=40.12 E-value=17 Score=33.39 Aligned_cols=28 Identities=32% Similarity=0.387 Sum_probs=24.1
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||-..-|...||+.++..
T Consensus 148 ~l~glkva~vGD~~~~rva~Sl~~~~~~ 175 (306)
T 4ekn_B 148 RIDGIKIAFVGDLKYGRTVHSLVYALSL 175 (306)
T ss_dssp CSTTCEEEEESCTTTCHHHHHHHHHHHT
T ss_pred CcCCCEEEEEcCCCCCcHHHHHHHHHHh
Confidence 4789999999997655799999999975
No 29
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=39.93 E-value=16 Score=33.82 Aligned_cols=26 Identities=35% Similarity=0.464 Sum_probs=22.6
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||- -|...||+-++..
T Consensus 154 ~l~glkva~vGD~--~rva~Sl~~~~~~ 179 (323)
T 3gd5_A 154 RLAGLKLAYVGDG--NNVAHSLLLGCAK 179 (323)
T ss_dssp CCTTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCC--CcHHHHHHHHHHH
Confidence 4789999999997 6889999988864
No 30
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=39.62 E-value=16 Score=34.05 Aligned_cols=26 Identities=31% Similarity=0.565 Sum_probs=22.5
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||- -|-..||+.++..
T Consensus 176 ~l~glkva~vGD~--~nva~Sl~~~~~~ 201 (340)
T 4ep1_A 176 TFKGIKLAYVGDG--NNVCHSLLLASAK 201 (340)
T ss_dssp CCTTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCC--chhHHHHHHHHHH
Confidence 4789999999995 5699999998875
No 31
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=39.32 E-value=6 Score=32.92 Aligned_cols=13 Identities=31% Similarity=0.460 Sum_probs=11.3
Q ss_pred CcEEEEecccchh
Q 037533 8 KRLVFVGDSLNRN 20 (297)
Q Consensus 8 K~~~FVGDSl~Rn 20 (297)
.+|+|+||||+..
T Consensus 6 ~~i~~~GDSit~G 18 (215)
T 2vpt_A 6 IKIMPVGDSCTEG 18 (215)
T ss_dssp EEEEEEESHHHHT
T ss_pred eEEEecccccccC
Confidence 4899999999875
No 32
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=39.21 E-value=20 Score=32.68 Aligned_cols=28 Identities=25% Similarity=0.322 Sum_probs=24.4
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||-..-|...||+-++..
T Consensus 146 ~l~gl~va~vGD~~~~rva~Sl~~~~~~ 173 (299)
T 1pg5_A 146 TIDGLVFALLGDLKYARTVNSLLRILTR 173 (299)
T ss_dssp CSTTCEEEEEECCSSCHHHHHHHHHGGG
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHh
Confidence 5789999999998766899999999875
No 33
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=38.45 E-value=16 Score=34.00 Aligned_cols=26 Identities=35% Similarity=0.418 Sum_probs=22.9
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||- -|-..||+.++..
T Consensus 172 ~l~glkva~vGD~--~rva~Sl~~~~~~ 197 (339)
T 4a8t_A 172 KLEDCKVVFVGDA--TQVCFSLGLITTK 197 (339)
T ss_dssp CGGGCEEEEESSC--CHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCC--chhHHHHHHHHHH
Confidence 5789999999997 6889999999875
No 34
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=36.63 E-value=18 Score=33.94 Aligned_cols=26 Identities=35% Similarity=0.418 Sum_probs=22.9
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||- -|...||+.++..
T Consensus 150 ~l~glkva~vGD~--~rva~Sl~~~~~~ 175 (355)
T 4a8p_A 150 KLEDCKVVFVGDA--TQVCFSLGLITTK 175 (355)
T ss_dssp CGGGCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCC--chhHHHHHHHHHH
Confidence 5789999999997 6789999999875
No 35
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus}
Probab=36.38 E-value=10 Score=34.98 Aligned_cols=28 Identities=4% Similarity=0.164 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEEe
Q 037533 141 LEAFRRALTTWARWVDANVNPMKSMVFFRG 170 (297)
Q Consensus 141 ~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt 170 (297)
.+.|+.+++.+++-+.+.. | ++.|++-+
T Consensus 266 ~~~~~~~l~~li~~ir~~~-p-~a~Iil~~ 293 (366)
T 2w9x_A 266 HADYVANYVKFVKQLHSNN-A-RAQFILMN 293 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHC-T-TCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHC-C-CCeEEEEe
Confidence 4678888888887776542 3 34566655
No 36
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP}
Probab=34.18 E-value=16 Score=34.40 Aligned_cols=14 Identities=21% Similarity=0.373 Sum_probs=12.2
Q ss_pred CCcEEEEecccchh
Q 037533 7 GKRLVFVGDSLNRN 20 (297)
Q Consensus 7 gK~~~FVGDSl~Rn 20 (297)
.|+|+|+||||+..
T Consensus 185 ~~~Iv~~GDSiT~G 198 (385)
T 3skv_A 185 KPHWIHYGDSICHG 198 (385)
T ss_dssp CCEEEEEECSSCTT
T ss_pred CceEEEEeccccCC
Confidence 68999999999764
No 37
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A*
Probab=33.74 E-value=9.8 Score=34.56 Aligned_cols=15 Identities=27% Similarity=0.616 Sum_probs=12.5
Q ss_pred cCCcEEEEecccchh
Q 037533 6 RGKRLVFVGDSLNRN 20 (297)
Q Consensus 6 RgK~~~FVGDSl~Rn 20 (297)
..++|+|+||||+-.
T Consensus 121 ~~~~I~~iGDSiT~G 135 (341)
T 2wao_A 121 LERKIEFIGDSITCA 135 (341)
T ss_dssp CSEEEEEEESHHHHT
T ss_pred CCceEEEEccccccC
Confidence 457999999999864
No 38
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=32.66 E-value=16 Score=33.90 Aligned_cols=70 Identities=11% Similarity=0.128 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCCCCCCCCCCCCCCCcccccCCCCcccCCCChhHHHHHHHHhccCce
Q 037533 141 LEAFRRALTTWARWVDANVNPMKSMVFFRGYSASHFSGGQWNSGGACDHETEPIKNKTYLTAYPPKMKVLESVLKGMKTH 220 (297)
Q Consensus 141 ~~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~Hfe~g~W~~GG~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~ 220 (297)
.+.|+..|+.+.+.+.+. ..++++-|..|.. ..|+..+... ......+++++++.++. .
T Consensus 251 ~~~~~~~l~~ii~~lr~~----~a~vilvtP~~~~---~~~~~~~~~~------------~~~~~~~~~i~~lA~~~--~ 309 (375)
T 2o14_A 251 EAEFKEVMRDMIRQVKAK----GADVILSTPQGRA---TDFTSEGIHS------------SVNRWYRASILALAEEE--K 309 (375)
T ss_dssp HHHHHHHHHHHHHHHHTT----TCEEEEECCCCCT---TCBCTTSCBC------------CTTSTTHHHHHHHHHHT--T
T ss_pred HHHHHHHHHHHHHHHHHC----CCEEEEECCCCcc---cccCcccchh------------HHHHHHHHHHHHHHHHc--C
Confidence 466888888887766533 2456666532211 1132111100 01122245566665543 6
Q ss_pred eEEeecccccc
Q 037533 221 VTYLNITRLTD 231 (297)
Q Consensus 221 v~lLdiT~ls~ 231 (297)
+.++|+..++.
T Consensus 310 v~~iDl~~~~~ 320 (375)
T 2o14_A 310 TYLIDLNVLSS 320 (375)
T ss_dssp CEEECHHHHHH
T ss_pred CeEEehHHHHH
Confidence 89999987653
No 39
>1vcc_A DNA topoisomerase I; DNA binding; HET: DNA; 1.60A {Vaccinia virus} SCOP: d.121.1.1
Probab=32.01 E-value=10 Score=27.50 Aligned_cols=15 Identities=53% Similarity=0.937 Sum_probs=11.9
Q ss_pred CcEEEEe-cccchhHH
Q 037533 8 KRLVFVG-DSLNRNMW 22 (297)
Q Consensus 8 K~~~FVG-DSl~Rnq~ 22 (297)
.+++||| ||-+|-|+
T Consensus 55 ~~lIfvG~DSKgrkQY 70 (77)
T 1vcc_A 55 TRLIFVGSDSKGRRQY 70 (77)
T ss_dssp TSEEEEEECTTSCEEE
T ss_pred CceEEEeecCCCceee
Confidence 4689999 88888774
No 40
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=31.51 E-value=22 Score=32.81 Aligned_cols=26 Identities=27% Similarity=0.510 Sum_probs=21.3
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||- .|...||+=++..
T Consensus 152 ~l~gl~va~vGD~--~~va~Sl~~~~~~ 177 (321)
T 1oth_A 152 SLKGLTLSWIGDG--NNILHSIMMSAAK 177 (321)
T ss_dssp CCTTCEEEEESCS--SHHHHHHHTTTGG
T ss_pred CcCCcEEEEECCc--hhhHHHHHHHHHH
Confidence 5789999999993 4789999877764
No 41
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=29.86 E-value=30 Score=31.97 Aligned_cols=27 Identities=33% Similarity=0.532 Sum_probs=22.5
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+|||| ..-|...||+-++..
T Consensus 164 ~l~gl~va~vGD-~~~rva~Sl~~~~~~ 190 (325)
T 1vlv_A 164 RLKGVKVVFMGD-TRNNVATSLMIACAK 190 (325)
T ss_dssp CSTTCEEEEESC-TTSHHHHHHHHHHHH
T ss_pred CcCCcEEEEECC-CCcCcHHHHHHHHHH
Confidence 478999999999 324899999999875
No 42
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=29.76 E-value=17 Score=30.83 Aligned_cols=67 Identities=18% Similarity=0.227 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcceEEEEeecCCCCCCCCCCCCCCCCcccccCCCCcccCCCChhHHHHHHHHhccCcee
Q 037533 142 EAFRRALTTWARWVDANVNPMKSMVFFRGYSASHFSGGQWNSGGACDHETEPIKNKTYLTAYPPKMKVLESVLKGMKTHV 221 (297)
Q Consensus 142 ~ay~~al~t~~~~i~~~~~~~~~~vf~Rt~SP~Hfe~g~W~~GG~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~v 221 (297)
+.|+..|+.+.+-+.+. ...+++-|..|.- .|.. |... . ......+.+++++++. .+
T Consensus 108 ~~~~~~l~~~i~~~~~~----g~~vil~tp~p~~----~~~~-~~~~-------~-----~~~~y~~~~~~vA~~~--~v 164 (233)
T 1k7c_A 108 LTFPAYLENAAKLFTAK----GAKVILSSQTPNN----PWET-GTFV-------N-----SPTRFVEYAELAAEVA--GV 164 (233)
T ss_dssp EBHHHHHHHHHHHHHHT----TCEEEEECCCCCC----TTTT-SSCC-------C-----CCCHHHHHHHHHHHHH--TC
T ss_pred HHHHHHHHHHHHHHHHC----CCEEEEECCCCcc----ccCC-Cccc-------c-----chHHHHHHHHHHHHHh--CC
Confidence 35777777776655432 2356666655531 2331 1111 0 0112345566666544 69
Q ss_pred EEeecccccc
Q 037533 222 TYLNITRLTD 231 (297)
Q Consensus 222 ~lLdiT~ls~ 231 (297)
.++|+..++.
T Consensus 165 ~~iD~~~~~~ 174 (233)
T 1k7c_A 165 EYVDHWSYVD 174 (233)
T ss_dssp EEECHHHHHH
T ss_pred eEEecHHHHH
Confidence 9999987653
No 43
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=28.96 E-value=28 Score=31.83 Aligned_cols=28 Identities=21% Similarity=0.198 Sum_probs=23.9
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||-..-|...||+=++..
T Consensus 152 ~l~gl~va~vGD~~~~rva~Sl~~~~~~ 179 (308)
T 1ml4_A 152 RIDGLKIGLLGDLKYGRTVHSLAEALTF 179 (308)
T ss_dssp CSSSEEEEEESCTTTCHHHHHHHHHGGG
T ss_pred CCCCeEEEEeCCCCcCchHHHHHHHHHH
Confidence 5789999999997666799999988875
No 44
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=28.44 E-value=34 Score=31.09 Aligned_cols=28 Identities=21% Similarity=0.370 Sum_probs=24.8
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|++|||=..-|-..||+-++..
T Consensus 143 ~l~gl~va~vGDl~~~rva~Sl~~~~~~ 170 (291)
T 3d6n_B 143 EVKDLRVLYVGDIKHSRVFRSGAPLLNM 170 (291)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHH
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHH
Confidence 5789999999997778999999998875
No 45
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=25.22 E-value=40 Score=30.76 Aligned_cols=26 Identities=31% Similarity=0.433 Sum_probs=22.4
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||- -|-..||+-+|+.
T Consensus 151 ~l~gl~ia~vGD~--~rva~Sl~~~~~~ 176 (301)
T 2ef0_A 151 GLAGLEVAWVGDG--NNVLNSLLEVAPL 176 (301)
T ss_dssp CCTTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CcCCcEEEEECCC--chhHHHHHHHHHH
Confidence 5789999999994 5789999988875
No 46
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=23.87 E-value=43 Score=30.69 Aligned_cols=26 Identities=31% Similarity=0.540 Sum_probs=22.5
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||- -|...||+=+++.
T Consensus 152 ~l~gl~va~vGD~--~rva~Sl~~~~~~ 177 (315)
T 1pvv_A 152 TIKGVKVVYVGDG--NNVAHSLMIAGTK 177 (315)
T ss_dssp CCTTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CcCCcEEEEECCC--cchHHHHHHHHHH
Confidence 5789999999994 6899999988875
No 47
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=23.52 E-value=18 Score=30.31 Aligned_cols=22 Identities=9% Similarity=0.170 Sum_probs=18.5
Q ss_pred cchhcCCCCcEEEEcccccccc
Q 037533 97 RSSDQYKGADIIIFNTGHWWTH 118 (297)
Q Consensus 97 ~~~~~~~~~DvlV~ntGhWw~~ 118 (297)
+....+..+|.|||.+=-||..
T Consensus 80 ~~~~~l~~AD~iV~~~P~y~~~ 101 (212)
T 3r6w_A 80 QLVGELFDSDLLVISTPMYNFS 101 (212)
T ss_dssp HHHHHHHHCSEEEEEEECBTTB
T ss_pred HHHHHHHhCCEEEEEcCccccc
Confidence 4467789999999999999864
No 48
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=23.49 E-value=42 Score=31.06 Aligned_cols=27 Identities=30% Similarity=0.391 Sum_probs=22.7
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||- --|...||+-++..
T Consensus 152 ~l~gl~va~vGD~-~~~va~Sl~~~~~~ 178 (335)
T 1dxh_A 152 PLHDISYAYLGDA-RNNMGNSLLLIGAK 178 (335)
T ss_dssp CGGGCEEEEESCC-SSHHHHHHHHHHHH
T ss_pred CcCCeEEEEecCC-ccchHHHHHHHHHH
Confidence 5789999999994 24899999998875
No 49
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=22.65 E-value=49 Score=30.62 Aligned_cols=27 Identities=26% Similarity=0.343 Sum_probs=22.6
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||- .-|...||+-++..
T Consensus 152 ~l~gl~ia~vGD~-~~~va~Sl~~~~~~ 178 (333)
T 1duv_G 152 AFNEMTLVYAGDA-RNNMGNSMLEAAAL 178 (333)
T ss_dssp CGGGCEEEEESCT-TSHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCC-ccchHHHHHHHHHH
Confidence 5789999999994 24899999988875
No 50
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=22.03 E-value=51 Score=30.07 Aligned_cols=27 Identities=41% Similarity=0.469 Sum_probs=22.6
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||- --|...||+-++..
T Consensus 145 ~l~gl~va~vGD~-~~rva~Sl~~~~~~ 171 (307)
T 2i6u_A 145 ALRGLRLSYFGDG-ANNMAHSLLLGGVT 171 (307)
T ss_dssp CCTTCEEEEESCT-TSHHHHHHHHHHHH
T ss_pred CcCCeEEEEECCC-CcCcHHHHHHHHHH
Confidence 5789999999994 24899999998875
No 51
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=21.73 E-value=51 Score=30.73 Aligned_cols=27 Identities=26% Similarity=0.365 Sum_probs=22.1
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||--+ |-..|++.++..
T Consensus 178 ~l~gl~ia~vGD~~~-~va~S~~~~~~~ 204 (358)
T 4h31_A 178 ALADIQFAYLGDARN-NVGNSLMVGAAK 204 (358)
T ss_dssp CGGGCEEEEESCTTS-HHHHHHHHHHHH
T ss_pred CcCceEEEecCCCCc-ccchHHHHHHHh
Confidence 578899999999423 789999988875
No 52
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=21.70 E-value=52 Score=30.82 Aligned_cols=27 Identities=33% Similarity=0.434 Sum_probs=22.6
Q ss_pred cccCCcEEEEecccchhHHHHHHHHHhh
Q 037533 4 LLRGKRLVFVGDSLNRNMWESLVCILKN 31 (297)
Q Consensus 4 ~~RgK~~~FVGDSl~Rnq~eSLlClL~~ 31 (297)
.+.|++|+||||- .-|...||+-++..
T Consensus 173 ~l~gl~va~vGD~-~~rva~Sl~~~~~~ 199 (359)
T 2w37_A 173 KLQGLTLTFMGDG-RNNVANSLLVTGAI 199 (359)
T ss_dssp CCTTCEEEEESCT-TSHHHHHHHHHHHH
T ss_pred CcCCeEEEEECCC-ccchHHHHHHHHHH
Confidence 5789999999994 24899999998875
No 53
>2yvc_D Neprilysin; protein-peptide complex, cell adhesion; 3.20A {Mus musculus}
Probab=20.15 E-value=24 Score=20.02 Aligned_cols=13 Identities=15% Similarity=0.309 Sum_probs=10.3
Q ss_pred Eeecccccccccc
Q 037533 223 YLNITRLTDYRKD 235 (297)
Q Consensus 223 lLdiT~ls~~R~D 235 (297)
-||||.++..||-
T Consensus 6 qmditdinapkpk 18 (26)
T 2yvc_D 6 QMDITDINAPKPK 18 (26)
T ss_pred ccccccccCCCcc
Confidence 4799999887774
Done!