BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>037534
SESSSTGNEHRRRSSLESLFCYDKPIPEERIEKSISVSLSEKVIGDNPRCIECKAKGVVL
CATCSGSGLYVDSILESQGVIVKVPCLGCGGTGNIMCAECGGRGHCSP

High Scoring Gene Products

Symbol, full name Information P value
AT5G17840 protein from Arabidopsis thaliana 4.3e-38
AT2G24860 protein from Arabidopsis thaliana 9.0e-06
AT3G47650 protein from Arabidopsis thaliana 8.1e-05
ENA
ENHANCER OF ATNSI ACTIVITY
protein from Arabidopsis thaliana 0.00035
AT5G06130 protein from Arabidopsis thaliana 0.00035
LQY1
LOW QUANTUM YIELD OF PHOTOSYSTEM II 1
protein from Arabidopsis thaliana 0.00048
AT3G44020 protein from Arabidopsis thaliana 0.00072
EDA3
embryo sac development arrest 3
protein from Arabidopsis thaliana 0.00091

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  037534
        (108 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2175966 - symbol:AT5G17840 species:3702 "Arabi...   408  4.3e-38   1
TAIR|locus:2047426 - symbol:AT2G24860 species:3702 "Arabi...   103  9.0e-06   1
TAIR|locus:2079132 - symbol:AT3G47650 species:3702 "Arabi...    94  8.1e-05   1
TAIR|locus:4010713752 - symbol:ENA "ENHANCER OF ATNSI ACT...    88  0.00035   1
TAIR|locus:2152845 - symbol:AT5G06130 species:3702 "Arabi...    95  0.00035   1
TAIR|locus:2005585 - symbol:LQY1 "LOW QUANTUM YIELD OF PH...    87  0.00048   1
TAIR|locus:2097164 - symbol:AT3G44020 "AT3G44020" species...    86  0.00072   1
TAIR|locus:2044812 - symbol:EDA3 "embryo sac development ...    87  0.00091   1


>TAIR|locus:2175966 [details] [associations]
            symbol:AT5G17840 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0031072 "heat shock
            protein binding" evidence=IEA] [GO:0051082 "unfolded protein
            binding" evidence=IEA] InterPro:IPR001305 EMBL:CP002688
            SUPFAM:SSF57938 EMBL:AY056279 EMBL:AY091430 EMBL:AY085721
            IPI:IPI00518478 RefSeq:NP_197286.1 UniGene:At.26340
            ProteinModelPortal:Q93ZT2 SMR:Q93ZT2 IntAct:Q93ZT2
            EnsemblPlants:AT5G17840.1 GeneID:831652 KEGG:ath:AT5G17840
            TAIR:At5g17840 InParanoid:Q93ZT2 OMA:DKSVPEE PhylomeDB:Q93ZT2
            ProtClustDB:CLSN2916305 ArrayExpress:Q93ZT2 Genevestigator:Q93ZT2
            Uniprot:Q93ZT2
        Length = 154

 Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
 Identities = 73/105 (69%), Positives = 89/105 (84%)

Query:     1 SESSSTGNEHRRRSSLESLFCYDKPIPEERIEKSISVSLSEKVIGDNPRCIECKAKGVVL 60
             +ES    + HR+RSSLES+FCYDKPIPEE IE+ + +S+SE+ IGDN RC  C+AKG +L
Sbjct:    47 AESCLKRDVHRQRSSLESMFCYDKPIPEEIIEEPVGLSMSEREIGDNQRCTCCEAKGALL 106

Query:    61 CATCSGSGLYVDSILESQGVIVKVPCLGCGGTGNIMCAECGGRGH 105
             C+TCSG+GLYVDSI+ESQG+IVKV CLGCGG+GNIMC  CGGRGH
Sbjct:   107 CSTCSGTGLYVDSIMESQGIIVKVRCLGCGGSGNIMCKLCGGRGH 151


>TAIR|locus:2047426 [details] [associations]
            symbol:AT2G24860 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0031072 "heat
            shock protein binding" evidence=IEA] [GO:0051082 "unfolded protein
            binding" evidence=IEA] InterPro:IPR001305 EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC006585 SUPFAM:SSF57938
            EMBL:AF410290 EMBL:AY097372 EMBL:AY088871 EMBL:AK176284
            IPI:IPI00520827 PIR:D84641 RefSeq:NP_565578.1 UniGene:At.13979
            ProteinModelPortal:Q9SK46 SMR:Q9SK46 IntAct:Q9SK46 STRING:Q9SK46
            EnsemblPlants:AT2G24860.1 GeneID:817023 KEGG:ath:AT2G24860
            TAIR:At2g24860 eggNOG:NOG286430 HOGENOM:HOG000153500
            InParanoid:Q9SK46 OMA:GHVECKW PhylomeDB:Q9SK46
            ProtClustDB:CLSN2688396 ArrayExpress:Q9SK46 Genevestigator:Q9SK46
            Uniprot:Q9SK46
        Length = 144

 Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 23/78 (29%), Positives = 41/78 (52%)

Query:    29 ERIEKSISVSLSEKVIGDNPRCIECKAKGVVLCATCSGSGLYV--DSILESQGVIVKVPC 86
             +R++++  +S     +G    C  C +KG V C  C+G+G ++  D++L  Q       C
Sbjct:    59 KRMDQAWIISQQPSPVG----CSSCNSKGHVECKWCAGTGFFILGDNML-CQVPSRNTSC 113

Query:    87 LGCGGTGNIMCAECGGRG 104
             + C G G+  C++C G G
Sbjct:   114 VICSGQGSASCSDCKGTG 131


>TAIR|locus:2079132 [details] [associations]
            symbol:AT3G47650 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0031072 "heat shock
            protein binding" evidence=IEA] [GO:0051082 "unfolded protein
            binding" evidence=IEA] [GO:0006098 "pentose-phosphate shunt"
            evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
            [GO:0009657 "plastid organization" evidence=RCA] [GO:0009773
            "photosynthetic electron transport in photosystem I" evidence=RCA]
            [GO:0010207 "photosystem II assembly" evidence=RCA] [GO:0019288
            "isopentenyl diphosphate biosynthetic process,
            mevalonate-independent pathway" evidence=RCA] InterPro:IPR001305
            GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
            SUPFAM:SSF57938 EMBL:AL132955 EMBL:AF370246 EMBL:AY062972
            IPI:IPI00546027 PIR:T45725 RefSeq:NP_190349.1 UniGene:At.23492
            ProteinModelPortal:Q9SN73 SMR:Q9SN73 STRING:Q9SN73 PaxDb:Q9SN73
            PRIDE:Q9SN73 ProMEX:Q9SN73 EnsemblPlants:AT3G47650.1 GeneID:823919
            KEGG:ath:AT3G47650 TAIR:At3g47650 eggNOG:NOG323241
            HOGENOM:HOG000241823 InParanoid:Q9SN73 OMA:ANSLCFF PhylomeDB:Q9SN73
            ProtClustDB:CLSN2719659 ArrayExpress:Q9SN73 Genevestigator:Q9SN73
            Uniprot:Q9SN73
        Length = 136

 Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 23/84 (27%), Positives = 36/84 (42%)

Query:    29 ERIEKSISVSLSEKVIGDNPR--------CIECKAKGVVLCATCSGSGLYVDSILESQGV 80
             E ++ S S S   K   +NP+        C  C+ +G V C+ C G G+ +      Q  
Sbjct:    43 ELLQTSRSQSFEVKAANNNPQGTKPNSLVCANCEGEGCVACSQCKGGGVNLIDHFNGQFK 102

Query:    81 IVKVPCLGCGGTGNIMCAECGGRG 104
                + C  C G   ++C +C G G
Sbjct:   103 AGAL-CWLCRGKKEVLCGDCNGAG 125


>TAIR|locus:4010713752 [details] [associations]
            symbol:ENA "ENHANCER OF ATNSI ACTIVITY" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
            [GO:0031072 "heat shock protein binding" evidence=IEA] [GO:0051082
            "unfolded protein binding" evidence=IEA] EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AB022219 EMBL:BT015109 EMBL:AK176588
            EMBL:AK176702 EMBL:AK176807 IPI:IPI00525792 RefSeq:NP_001078171.1
            UniGene:At.71315 ProteinModelPortal:Q9LUN0 SMR:Q9LUN0 IntAct:Q9LUN0
            EnsemblPlants:AT3G17668.1 GeneID:5008005 KEGG:ath:AT3G17668
            TAIR:At3g17668 eggNOG:NOG290154 HOGENOM:HOG000005999 OMA:REPMGFH
            ProtClustDB:CLSN2920163 Genevestigator:Q9LUN0 Uniprot:Q9LUN0
        Length = 135

 Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
 Identities = 27/83 (32%), Positives = 34/83 (40%)

Query:    24 KPIPEERIEKSISVSLSEKVIGDNPRCIECKAKGVVLCATCSGSGLY--VDSILESQGVI 81
             KP    R +      +  K  G   RC+ C   G V C  C G G    VD  +  +G  
Sbjct:    37 KPSWIVRTQSGAKTCMKSKAKG---RCVICHGSGRVDCFNCCGKGRTNCVDVEMLPRGEW 93

Query:    82 VKVPCLGCGGTGNIMCAECGGRG 104
              K  C  CGG+G   C+ C G G
Sbjct:    94 PKW-CKSCGGSGLSDCSRCLGTG 115


>TAIR|locus:2152845 [details] [associations]
            symbol:AT5G06130 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] EMBL:CP002688
            EMBL:AY072147 EMBL:AY133750 IPI:IPI00527561 RefSeq:NP_196231.2
            UniGene:At.9801 ProteinModelPortal:Q8VYD8 SMR:Q8VYD8 PaxDb:Q8VYD8
            PRIDE:Q8VYD8 EnsemblPlants:AT5G06130.2 GeneID:830500
            KEGG:ath:AT5G06130 TAIR:At5g06130 eggNOG:NOG279301
            InParanoid:Q8VYD8 OMA:PCARCSA ProtClustDB:CLSN2686933
            ArrayExpress:Q8VYD8 Genevestigator:Q8VYD8 Uniprot:Q8VYD8
        Length = 315

 Score = 95 (38.5 bits), Expect = 0.00035, P = 0.00035
 Identities = 22/63 (34%), Positives = 30/63 (47%)

Query:    46 DNPRCIECKAKGVVLCATCSGSG--LYVDSILESQGV--IVKVP----CLGCGGTGNIMC 97
             +  RC  C   G + CA CS SG  L +D I   +    +++V     CL C G G +MC
Sbjct:   234 EKKRCKYCLGTGYLPCARCSASGVCLSIDPITRPRATNQLMQVATTKRCLNCSGAGKVMC 293

Query:    98 AEC 100
               C
Sbjct:   294 PTC 296


>TAIR|locus:2005585 [details] [associations]
            symbol:LQY1 "LOW QUANTUM YIELD OF PHOTOSYSTEM II 1"
            species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0031072 "heat shock protein binding"
            evidence=IEA] [GO:0051082 "unfolded protein binding" evidence=IEA]
            [GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
            [GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0003756 "protein
            disulfide isomerase activity" evidence=IDA] [GO:0009534
            "chloroplast thylakoid" evidence=IDA] [GO:0010206 "photosystem II
            repair" evidence=IMP] [GO:0006098 "pentose-phosphate shunt"
            evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
            [GO:0009657 "plastid organization" evidence=RCA] [GO:0010207
            "photosystem II assembly" evidence=RCA] [GO:0019684
            "photosynthesis, light reaction" evidence=RCA] [GO:0035304
            "regulation of protein dephosphorylation" evidence=RCA]
            InterPro:IPR001305 PROSITE:PS51188 GO:GO:0016021 EMBL:CP002684
            GO:GO:0009570 GO:GO:0046872 GO:GO:0009535 Gene3D:2.10.230.10
            SUPFAM:SSF57938 GO:GO:0003756 GO:GO:0010206 HSSP:P08622
            EMBL:AC006434 EMBL:BT002378 EMBL:BT006547 EMBL:AK117868
            IPI:IPI00538661 RefSeq:NP_177698.1 UniGene:At.34746
            ProteinModelPortal:Q8GSJ6 SMR:Q8GSJ6 IntAct:Q8GSJ6 STRING:Q8GSJ6
            PRIDE:Q8GSJ6 EnsemblPlants:AT1G75690.1 GeneID:843903
            KEGG:ath:AT1G75690 TAIR:At1g75690 eggNOG:NOG306333
            HOGENOM:HOG000083374 InParanoid:Q8GSJ6 OMA:TQIDNAA PhylomeDB:Q8GSJ6
            ProtClustDB:PLN03165 Genevestigator:Q8GSJ6 Uniprot:Q8GSJ6
        Length = 154

 Score = 87 (35.7 bits), Expect = 0.00048, P = 0.00048
 Identities = 19/56 (33%), Positives = 25/56 (44%)

Query:    50 CIECKAKGVVLCATCSGSGLYVDSILESQGVIVKVP-CLGCGGTGNIMCAECGGRG 104
             C  C   G   C  C GSG   +  +E  G   +V  C+ C G G++ C  C G G
Sbjct:    87 CFPCNGTGAQKCRLCVGSG---NVTVELGGGEKEVSNCINCDGAGSLTCTTCQGSG 139


>TAIR|locus:2097164 [details] [associations]
            symbol:AT3G44020 "AT3G44020" species:3702 "Arabidopsis
            thaliana" [GO:0009543 "chloroplast thylakoid lumen" evidence=ISS]
            EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL163975 EMBL:AK118643
            IPI:IPI00532713 PIR:T48956 RefSeq:NP_189988.1 UniGene:At.36205
            ProteinModelPortal:Q9LXV9 SMR:Q9LXV9 EnsemblPlants:AT3G44020.1
            GeneID:823519 KEGG:ath:AT3G44020 TAIR:At3g44020 eggNOG:NOG276110
            HOGENOM:HOG000238632 InParanoid:Q9LXV9 OMA:MKVESGM PhylomeDB:Q9LXV9
            ProtClustDB:CLSN2914780 Genevestigator:Q9LXV9 Uniprot:Q9LXV9
        Length = 159

 Score = 86 (35.3 bits), Expect = 0.00072, P = 0.00072
 Identities = 24/72 (33%), Positives = 33/72 (45%)

Query:    34 SISVSLSEKVIGDNPRCIECKAKGVVLCATCSGSGLYVDSILESQGVIVKVPCLGCGGTG 93
             +I++SL     GD   C  C   G   C  C    + V+S     G+   V C  C G+G
Sbjct:    92 AIALSLFLGFKGDPVPCERCGGNGGTKCVFCLEGKMKVES-----GM---VDCKVCKGSG 143

Query:    94 NIMCAECGGRGH 105
              I C +CGG G+
Sbjct:   144 LIFCKKCGGSGY 155


>TAIR|locus:2044812 [details] [associations]
            symbol:EDA3 "embryo sac development arrest 3"
            species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0031072 "heat shock protein binding"
            evidence=IEA] [GO:0051082 "unfolded protein binding" evidence=IEA]
            [GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
            [GO:0009561 "megagametogenesis" evidence=IMP] [GO:0006098
            "pentose-phosphate shunt" evidence=RCA] [GO:0009902 "chloroplast
            relocation" evidence=RCA] [GO:0010027 "thylakoid membrane
            organization" evidence=RCA] [GO:0010304 "PSII associated
            light-harvesting complex II catabolic process" evidence=RCA]
            [GO:0015995 "chlorophyll biosynthetic process" evidence=RCA]
            [GO:0016117 "carotenoid biosynthetic process" evidence=RCA]
            [GO:0019288 "isopentenyl diphosphate biosynthetic process,
            mevalonate-independent pathway" evidence=RCA] [GO:0019684
            "photosynthesis, light reaction" evidence=RCA] [GO:0034660 "ncRNA
            metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
            dephosphorylation" evidence=RCA] [GO:0042793 "transcription from
            plastid promoter" evidence=RCA] InterPro:IPR001305 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0009561 GO:GO:0009535
            Gene3D:2.10.230.10 SUPFAM:SSF57938 EMBL:AC004238 EMBL:AY099664
            EMBL:AY128851 IPI:IPI00534099 PIR:T00468 RefSeq:NP_001078004.1
            RefSeq:NP_181032.1 UniGene:At.27661 ProteinModelPortal:O64750
            SMR:O64750 STRING:O64750 PaxDb:O64750 PRIDE:O64750
            EnsemblPlants:AT2G34860.1 EnsemblPlants:AT2G34860.2 GeneID:818051
            KEGG:ath:AT2G34860 TAIR:At2g34860 eggNOG:NOG321647
            HOGENOM:HOG000012828 InParanoid:O64750 OMA:MTACVCA PhylomeDB:O64750
            ProtClustDB:CLSN2683664 ArrayExpress:O64750 Genevestigator:O64750
            Uniprot:O64750
        Length = 186

 Score = 87 (35.7 bits), Expect = 0.00091, P = 0.00091
 Identities = 18/56 (32%), Positives = 26/56 (46%)

Query:    50 CIECKAKGVVLCATCSGSGLYVD-SILESQGVIVKVPCLGCGGTGNIMCAECGGRG 104
             C  C+  G VLC  C G+G +   +   ++ V     C  C G G ++C  C G G
Sbjct:   102 CRNCQGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTG 157


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.135   0.419    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      108       108   0.00091  102 3  11 22  0.48    30
                                                     29  0.40    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  541 (58 KB)
  Total size of DFA:  119 KB (2078 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.87u 0.14s 13.01t   Elapsed:  00:00:01
  Total cpu time:  12.87u 0.14s 13.01t   Elapsed:  00:00:01
  Start:  Tue May 21 00:01:46 2013   End:  Tue May 21 00:01:47 2013

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