Query 037535
Match_columns 216
No_of_seqs 144 out of 1230
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 22:56:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037535.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037535hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fs1_A SKP2 F-BOX, cyclin A/CD 99.3 8.1E-13 2.8E-17 76.3 3.9 40 1-40 9-48 (53)
2 2e31_A FBS1, F-box only protei 99.3 1.4E-12 4.9E-17 100.9 4.3 48 1-48 51-99 (297)
3 3l2o_B F-box only protein 4; s 98.3 1.9E-07 6.7E-12 71.7 2.1 48 2-49 6-53 (312)
4 3v7d_B Cell division control p 98.2 4.7E-07 1.6E-11 74.3 1.9 39 2-40 16-55 (464)
5 2ovr_B FBW7, F-BOX/WD repeat p 98.1 2.2E-06 7.5E-11 70.1 4.1 45 1-45 19-63 (445)
6 2ast_B S-phase kinase-associat 98.1 1.4E-06 4.9E-11 68.7 2.7 39 1-39 9-47 (336)
7 1p22_A F-BOX/WD-repeat protein 97.9 1.3E-06 4.5E-11 71.3 0.0 41 2-42 12-56 (435)
8 2p1m_B Transport inhibitor res 97.7 9.6E-06 3.3E-10 68.8 2.1 34 1-34 6-40 (594)
9 3ii7_A Kelch-like protein 7; p 97.6 0.001 3.5E-08 51.4 12.1 99 104-214 50-153 (306)
10 1zgk_A Kelch-like ECH-associat 97.6 0.0031 1.1E-07 48.9 14.1 98 104-214 65-172 (308)
11 4asc_A Kelch repeat and BTB do 97.5 0.0031 1.1E-07 49.0 14.0 98 104-214 143-247 (315)
12 3ii7_A Kelch-like protein 7; p 97.5 0.0031 1.1E-07 48.7 13.4 99 104-214 96-204 (306)
13 2xn4_A Kelch-like protein 2; s 97.5 0.0039 1.3E-07 48.0 13.8 97 105-214 57-159 (302)
14 2woz_A Kelch repeat and BTB do 97.5 0.0059 2E-07 47.5 14.8 82 121-214 80-162 (318)
15 4asc_A Kelch repeat and BTB do 97.5 0.0011 3.9E-08 51.5 10.6 99 104-214 93-200 (315)
16 2uvk_A YJHT; unknown function, 97.5 0.0027 9.4E-08 50.2 12.8 100 104-214 60-204 (357)
17 3ogk_B Coronatine-insensitive 97.4 5E-05 1.7E-09 64.4 1.8 33 2-34 14-47 (592)
18 2woz_A Kelch repeat and BTB do 97.3 0.0023 7.9E-08 49.8 11.0 99 104-214 104-210 (318)
19 1zgk_A Kelch-like ECH-associat 97.3 0.0053 1.8E-07 47.5 12.6 98 104-214 116-219 (308)
20 2vpj_A Kelch-like protein 12; 97.3 0.0058 2E-07 47.0 12.6 98 104-214 107-210 (301)
21 2vpj_A Kelch-like protein 12; 97.3 0.0051 1.7E-07 47.3 12.3 98 104-214 57-163 (301)
22 2xn4_A Kelch-like protein 2; s 97.2 0.0039 1.3E-07 48.1 11.0 99 104-214 103-208 (302)
23 2uvk_A YJHT; unknown function, 97.2 0.0035 1.2E-07 49.5 10.6 99 104-214 14-122 (357)
24 2zwa_A Leucine carboxyl methyl 96.5 0.0061 2.1E-07 53.0 7.4 97 108-214 396-504 (695)
25 1k3i_A Galactose oxidase precu 96.3 0.024 8.1E-07 48.9 9.9 80 105-193 249-330 (656)
26 2zwa_A Leucine carboxyl methyl 95.8 0.072 2.5E-06 46.3 10.5 99 108-214 499-611 (695)
27 1k3i_A Galactose oxidase precu 94.3 0.033 1.1E-06 47.9 3.9 81 120-214 220-301 (656)
28 2kwv_A RAD30 homolog B, DNA po 75.9 1.4 4.8E-05 23.4 1.5 16 2-17 22-37 (48)
29 1evh_A WH1 domain, protein (ME 66.6 13 0.00044 24.0 5.0 42 119-167 11-52 (112)
30 1ddw_A GLGF-domain protein hom 62.1 19 0.00064 23.6 5.2 40 119-167 11-51 (120)
31 4gga_A P55CDC, cell division c 55.7 70 0.0024 25.0 8.7 29 107-136 114-142 (420)
32 4ggc_A P55CDC, cell division c 55.0 45 0.0015 24.4 7.1 28 107-135 34-61 (318)
33 2dk7_A Transcription elongatio 53.1 11 0.00038 22.3 2.5 24 111-134 22-45 (73)
34 1i2h_A PSD-ZIP45(homer-1C/VESL 49.5 32 0.0011 23.9 4.9 40 119-167 16-56 (168)
35 1ugj_A Riken cDNA 2310057J16 p 47.4 30 0.001 23.3 4.3 74 111-191 57-133 (141)
36 1egx_A VAsp, vasodilator-stimu 44.0 38 0.0013 21.8 4.4 43 119-167 11-53 (115)
37 2jp2_A Spred-2, sprouty-relate 36.6 66 0.0023 21.1 4.7 43 119-167 20-65 (126)
38 1xod_A Spred1; sprouty, EVH1, 35.6 51 0.0018 21.3 4.0 43 119-167 11-56 (118)
39 1e0n_A Hypothetical protein; Y 32.6 41 0.0014 15.4 3.1 18 117-134 8-25 (27)
40 1tns_A MU-transposase; DNA-bin 31.2 25 0.00086 20.9 1.7 18 1-18 50-67 (76)
41 3ft1_A PHL P 3 allergen; beta- 31.1 99 0.0034 19.4 5.1 43 151-193 5-47 (100)
42 3enb_A PRE-mRNA-processing-spl 31.0 31 0.0011 24.8 2.5 27 106-132 24-50 (222)
43 3s3x_D Psalmotoxin-1; acid-sen 25.8 36 0.0012 16.2 1.4 22 106-128 15-36 (37)
44 3e9l_A PRE-mRNA-processing-spl 25.5 44 0.0015 24.5 2.5 28 105-132 32-59 (257)
45 3sbt_A PRE-mRNA-splicing facto 25.0 46 0.0016 24.5 2.5 29 104-132 30-58 (260)
46 3odt_A Protein DOA1; ubiquitin 24.9 1.9E+02 0.0066 20.7 7.1 70 107-193 234-303 (313)
47 4a0p_A LRP6, LRP-6, low-densit 24.6 3.2E+02 0.011 23.1 12.7 67 106-187 45-112 (628)
48 3syx_A Sprouty-related, EVH1 d 24.4 1.3E+02 0.0046 19.8 4.5 17 119-135 18-34 (130)
49 3nol_A Glutamine cyclotransfer 23.8 2.2E+02 0.0075 21.3 6.2 54 107-160 179-238 (262)
50 1rmk_A MU-O-conotoxin mrvib; b 22.8 12 0.0004 17.7 -0.6 12 104-115 16-27 (31)
51 2agh_C Zinc finger protein HRX 22.6 54 0.0018 15.1 1.6 15 3-17 6-20 (31)
52 3rhi_A DNA-binding protein HU; 22.1 35 0.0012 20.9 1.3 15 122-136 62-76 (93)
53 2qyp_A Proactivator polypeptid 21.2 41 0.0014 20.3 1.5 28 6-33 59-86 (91)
54 2lh0_A Histone chaperone RTT10 21.2 35 0.0012 19.9 1.0 29 2-30 10-40 (70)
55 3p5b_L Low density lipoprotein 20.6 3.1E+02 0.011 21.4 9.2 31 149-187 248-278 (400)
56 1qc6_A EVH1 domain from ENA/VA 20.0 1.9E+02 0.0066 18.8 4.9 42 119-166 11-52 (130)
No 1
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.33 E-value=8.1e-13 Score=76.34 Aligned_cols=40 Identities=25% Similarity=0.437 Sum_probs=37.7
Q ss_pred CCCCCHHHHHHHHhcCCccchhhhccccHhhhhhhcChhH
Q 037535 1 MASLPTDIKIDILSRLPVKSLLRFKCMSKSFCSLIASQEF 40 (216)
Q Consensus 1 ~~~LP~Dll~eIl~rLp~~sl~r~r~VcK~W~~~i~s~~F 40 (216)
+..||+|++.+||.+||++++.++++|||+|+.++.++.|
T Consensus 9 ~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~l 48 (53)
T 1fs1_A 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (53)
T ss_dssp CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGG
T ss_pred HHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHH
Confidence 4689999999999999999999999999999999998876
No 2
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.29 E-value=1.4e-12 Score=100.90 Aligned_cols=48 Identities=17% Similarity=0.388 Sum_probs=45.2
Q ss_pred CCCCCHHHHHHHHhcCCccchh-hhccccHhhhhhhcChhHHHHHHhhc
Q 037535 1 MASLPTDIKIDILSRLPVKSLL-RFKCMSKSFCSLIASQEFIKIHLKRS 48 (216)
Q Consensus 1 ~~~LP~Dll~eIl~rLp~~sl~-r~r~VcK~W~~~i~s~~F~~~~~~~~ 48 (216)
|+.||+||+.+||++||+++|+ ||++|||+|+++++++.|-+.+..+.
T Consensus 51 ~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 51 LAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp TTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred hhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 5689999999999999999999 99999999999999999999887775
No 3
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=98.30 E-value=1.9e-07 Score=71.75 Aligned_cols=48 Identities=21% Similarity=0.336 Sum_probs=43.1
Q ss_pred CCCCHHHHHHHHhcCCccchhhhccccHhhhhhhcChhHHHHHHhhcc
Q 037535 2 ASLPTDIKIDILSRLPVKSLLRFKCMSKSFCSLIASQEFIKIHLKRSI 49 (216)
Q Consensus 2 ~~LP~Dll~eIl~rLp~~sl~r~r~VcK~W~~~i~s~~F~~~~~~~~~ 49 (216)
+.||+|++..||+.|++++++++.+|||+||.+..++..=+.+..+..
T Consensus 6 ~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~ 53 (312)
T 3l2o_B 6 TRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDL 53 (312)
T ss_dssp HHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSG
T ss_pred HhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccC
Confidence 479999999999999999999999999999999999987776666653
No 4
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.17 E-value=4.7e-07 Score=74.30 Aligned_cols=39 Identities=21% Similarity=0.416 Sum_probs=36.0
Q ss_pred CCCCHHHHHHHHhcCCccchhhhccccHhhhhhhcC-hhH
Q 037535 2 ASLPTDIKIDILSRLPVKSLLRFKCMSKSFCSLIAS-QEF 40 (216)
Q Consensus 2 ~~LP~Dll~eIl~rLp~~sl~r~r~VcK~W~~~i~s-~~F 40 (216)
+.||+|++.+||+.||+++|+++.+|||+|+.++.+ +..
T Consensus 16 ~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~ 55 (464)
T 3v7d_B 16 TSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSL 55 (464)
T ss_dssp HHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHH
T ss_pred HHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 469999999999999999999999999999999988 554
No 5
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.08 E-value=2.2e-06 Score=70.08 Aligned_cols=45 Identities=20% Similarity=0.261 Sum_probs=40.2
Q ss_pred CCCCCHHHHHHHHhcCCccchhhhccccHhhhhhhcChhHHHHHH
Q 037535 1 MASLPTDIKIDILSRLPVKSLLRFKCMSKSFCSLIASQEFIKIHL 45 (216)
Q Consensus 1 ~~~LP~Dll~eIl~rLp~~sl~r~r~VcK~W~~~i~s~~F~~~~~ 45 (216)
++.||+|++.+||..|++++|.++.+|||+|+.++.++.+-+...
T Consensus 19 ~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~ 63 (445)
T 2ovr_B 19 ISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKC 63 (445)
T ss_dssp TTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHH
T ss_pred hHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhhe
Confidence 467999999999999999999999999999999999887655443
No 6
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.06 E-value=1.4e-06 Score=68.69 Aligned_cols=39 Identities=26% Similarity=0.431 Sum_probs=35.8
Q ss_pred CCCCCHHHHHHHHhcCCccchhhhccccHhhhhhhcChh
Q 037535 1 MASLPTDIKIDILSRLPVKSLLRFKCMSKSFCSLIASQE 39 (216)
Q Consensus 1 ~~~LP~Dll~eIl~rLp~~sl~r~r~VcK~W~~~i~s~~ 39 (216)
+++||+|++.+||.+|+.+++.+++.|||+|+.+..++.
T Consensus 9 ~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~ 47 (336)
T 2ast_B 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDES 47 (336)
T ss_dssp SSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCST
T ss_pred hhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCch
Confidence 468999999999999999999999999999999986654
No 7
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.93 E-value=1.3e-06 Score=71.30 Aligned_cols=41 Identities=29% Similarity=0.362 Sum_probs=36.7
Q ss_pred CCCCHH----HHHHHHhcCCccchhhhccccHhhhhhhcChhHHH
Q 037535 2 ASLPTD----IKIDILSRLPVKSLLRFKCMSKSFCSLIASQEFIK 42 (216)
Q Consensus 2 ~~LP~D----ll~eIl~rLp~~sl~r~r~VcK~W~~~i~s~~F~~ 42 (216)
+.||+| |+.+||..|++++|+++.+|||+|+.++.++.+=+
T Consensus 12 ~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~ 56 (435)
T 1p22_A 12 TALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWK 56 (435)
T ss_dssp HHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHH
T ss_pred HHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHH
Confidence 458999 99999999999999999999999999998766543
No 8
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.72 E-value=9.6e-06 Score=68.82 Aligned_cols=34 Identities=18% Similarity=0.249 Sum_probs=29.4
Q ss_pred CCCCCHHHHHHHHhcCC-ccchhhhccccHhhhhh
Q 037535 1 MASLPTDIKIDILSRLP-VKSLLRFKCMSKSFCSL 34 (216)
Q Consensus 1 ~~~LP~Dll~eIl~rLp-~~sl~r~r~VcK~W~~~ 34 (216)
++.||+|++.+||.+|| .+++.+++.|||+|+.+
T Consensus 6 ~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 6 ALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ----CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred hhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 46899999999999999 99999999999999987
No 9
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.61 E-value=0.001 Score=51.44 Aligned_cols=99 Identities=9% Similarity=-0.041 Sum_probs=63.9
Q ss_pred EEecccceEEeec-----CCCcEEEEcCCCcceeecCCCCCCCCCccceeeeEEcccCCCCCeEEEEEEEEeeCCCCccE
Q 037535 104 IIDSCNGLIALKN-----DENGIAFWNPSTKEHLILPKYWGDLKDKVYMVVDGFGYDAVNDDYKVVRLVHFVRENVEYTE 178 (216)
Q Consensus 104 ~~~s~~Gll~~~~-----~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~ 178 (216)
.+...+|.|++.. ...++.++||.|++|..+|+++..+... .... ++ + +|+.+++..........
T Consensus 50 ~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~---~~~~--~~---~--~iyv~GG~~~~~~~~~~ 119 (306)
T 3ii7_A 50 ACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSL---AACA--AE---G--KIYTSGGSEVGNSALYL 119 (306)
T ss_dssp EEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSC---EEEE--ET---T--EEEEECCBBTTBSCCCC
T ss_pred EEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccce---eEEE--EC---C--EEEEECCCCCCCcEeee
Confidence 3444567665543 2468999999999999998876554332 1222 22 1 67777653223345678
Q ss_pred EEEEECCCCcEEEecCCCCcceecCCCceEECCeee
Q 037535 179 VSVYSLRTNSWRRIRVDFPYYILHGWDGKFVDGHVH 214 (216)
Q Consensus 179 ~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~~G~ly 214 (216)
+++|+..+++|+.+. .+|.... ....+.++|.+|
T Consensus 120 ~~~~d~~~~~W~~~~-~~p~~r~-~~~~~~~~~~iy 153 (306)
T 3ii7_A 120 FECYDTRTESWHTKP-SMLTQRC-SHGMVEANGLIY 153 (306)
T ss_dssp EEEEETTTTEEEEEC-CCSSCCB-SCEEEEETTEEE
T ss_pred EEEEeCCCCceEeCC-CCcCCcc-eeEEEEECCEEE
Confidence 999999999999998 6554322 124566777776
No 10
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.56 E-value=0.0031 Score=48.85 Aligned_cols=98 Identities=10% Similarity=0.042 Sum_probs=61.8
Q ss_pred EEecccceEEeecC----------CCcEEEEcCCCcceeecCCCCCCCCCccceeeeEEcccCCCCCeEEEEEEEEeeCC
Q 037535 104 IIDSCNGLIALKND----------ENGIAFWNPSTKEHLILPKYWGDLKDKVYMVVDGFGYDAVNDDYKVVRLVHFVREN 173 (216)
Q Consensus 104 ~~~s~~Gll~~~~~----------~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~ 173 (216)
.+...+|.|++... ..++.++||.|++|..+++++..+... .... ++ + +|+.+++.. ..
T Consensus 65 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~---~~~~--~~---~--~iyv~GG~~-~~ 133 (308)
T 1zgk_A 65 AGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRI---GVGV--ID---G--HIYAVGGSH-GC 133 (308)
T ss_dssp EEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTC---EEEE--ET---T--EEEEECCEE-TT
T ss_pred eEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCcccc---EEEE--EC---C--EEEEEcCCC-CC
Confidence 33445666655432 257999999999999998877654332 1222 22 1 677775532 22
Q ss_pred CCccEEEEEECCCCcEEEecCCCCcceecCCCceEECCeee
Q 037535 174 VEYTEVSVYSLRTNSWRRIRVDFPYYILHGWDGKFVDGHVH 214 (216)
Q Consensus 174 ~~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~~G~ly 214 (216)
.....+++|+..+++|+.+. .+|..... ...+.++|.+|
T Consensus 134 ~~~~~~~~yd~~~~~W~~~~-~~p~~r~~-~~~~~~~~~iy 172 (308)
T 1zgk_A 134 IHHNSVERYEPERDEWHLVA-PMLTRRIG-VGVAVLNRLLY 172 (308)
T ss_dssp EECCCEEEEETTTTEEEECC-CCSSCCBS-CEEEEETTEEE
T ss_pred cccccEEEECCCCCeEeECC-CCCccccc-eEEEEECCEEE
Confidence 34567999999999999998 55533221 24556677776
No 11
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.55 E-value=0.0031 Score=48.97 Aligned_cols=98 Identities=15% Similarity=0.116 Sum_probs=63.0
Q ss_pred EEecccceEEeec-------CCCcEEEEcCCCcceeecCCCCCCCCCccceeeeEEcccCCCCCeEEEEEEEEeeCCCCc
Q 037535 104 IIDSCNGLIALKN-------DENGIAFWNPSTKEHLILPKYWGDLKDKVYMVVDGFGYDAVNDDYKVVRLVHFVRENVEY 176 (216)
Q Consensus 104 ~~~s~~Gll~~~~-------~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~ 176 (216)
.+...+|.|.+.. ....+.++||.|++|..+++++..+... ... .++ + +++.+++.. .....
T Consensus 143 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~---~~~--~~~---~--~iyv~GG~~-~~~~~ 211 (315)
T 4asc_A 143 TVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLF---GAT--VHD---G--RIIVAAGVT-DTGLT 211 (315)
T ss_dssp EEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSC---EEE--EET---T--EEEEEEEEC-SSSEE
T ss_pred eEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhce---EEE--EEC---C--EEEEEeccC-CCCcc
Confidence 3444677665543 1358999999999999998876544332 111 222 2 777777642 22345
Q ss_pred cEEEEEECCCCcEEEecCCCCcceecCCCceEECCeee
Q 037535 177 TEVSVYSLRTNSWRRIRVDFPYYILHGWDGKFVDGHVH 214 (216)
Q Consensus 177 ~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~~G~ly 214 (216)
..+++|+..+++|+.+. .+|..... ...+.++|.+|
T Consensus 212 ~~~~~yd~~~~~W~~~~-~~p~~r~~-~~~~~~~~~l~ 247 (315)
T 4asc_A 212 SSAEVYSITDNKWAPFE-AFPQERSS-LSLVSLVGTLY 247 (315)
T ss_dssp EEEEEEETTTTEEEEEC-CCSSCCBS-CEEEEETTEEE
T ss_pred ceEEEEECCCCeEEECC-CCCCcccc-eeEEEECCEEE
Confidence 68999999999999998 55533221 14556677766
No 12
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.50 E-value=0.0031 Score=48.67 Aligned_cols=99 Identities=12% Similarity=0.067 Sum_probs=63.0
Q ss_pred EEecccceEEeec-------CCCcEEEEcCCCcceeecCCCCCCCCCccceeeeEEcccCCCCCeEEEEEEEEeeCCC--
Q 037535 104 IIDSCNGLIALKN-------DENGIAFWNPSTKEHLILPKYWGDLKDKVYMVVDGFGYDAVNDDYKVVRLVHFVRENV-- 174 (216)
Q Consensus 104 ~~~s~~Gll~~~~-------~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~-- 174 (216)
.+...+|.|.+.. ....+.++||.|++|..+|+++..+... .... ++ + +++.+++......
T Consensus 96 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~---~~~~--~~---~--~iyv~GG~~~~~~~~ 165 (306)
T 3ii7_A 96 AACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSH---GMVE--AN---G--LIYVCGGSLGNNVSG 165 (306)
T ss_dssp EEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSC---EEEE--ET---T--EEEEECCEESCTTTC
T ss_pred eEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCccee---EEEE--EC---C--EEEEECCCCCCCCcc
Confidence 4445577775542 2357999999999999998877654332 1111 22 2 6777765432222
Q ss_pred -CccEEEEEECCCCcEEEecCCCCcceecCCCceEECCeee
Q 037535 175 -EYTEVSVYSLRTNSWRRIRVDFPYYILHGWDGKFVDGHVH 214 (216)
Q Consensus 175 -~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~~G~ly 214 (216)
....+++|+..+++|+.+. .+|.... ....+.++|.+|
T Consensus 166 ~~~~~~~~yd~~~~~W~~~~-~~p~~r~-~~~~~~~~~~i~ 204 (306)
T 3ii7_A 166 RVLNSCEVYDPATETWTELC-PMIEARK-NHGLVFVKDKIF 204 (306)
T ss_dssp EECCCEEEEETTTTEEEEEC-CCSSCCB-SCEEEEETTEEE
T ss_pred cccceEEEeCCCCCeEEECC-Cccchhh-cceEEEECCEEE
Confidence 1678999999999999998 5554322 124556677766
No 13
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.49 E-value=0.0039 Score=48.05 Aligned_cols=97 Identities=10% Similarity=0.127 Sum_probs=62.1
Q ss_pred EecccceEEeec------CCCcEEEEcCCCcceeecCCCCCCCCCccceeeeEEcccCCCCCeEEEEEEEEeeCCCCccE
Q 037535 105 IDSCNGLIALKN------DENGIAFWNPSTKEHLILPKYWGDLKDKVYMVVDGFGYDAVNDDYKVVRLVHFVRENVEYTE 178 (216)
Q Consensus 105 ~~s~~Gll~~~~------~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~ 178 (216)
+...+|.|++.. ...++.++||.|++|..+|+++..+... .... ++ + +++.+++.. .......
T Consensus 57 ~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~---~~~~--~~---~--~iyv~GG~~-~~~~~~~ 125 (302)
T 2xn4_A 57 MVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTL---GAAV--LN---G--LLYAVGGFD-GSTGLSS 125 (302)
T ss_dssp EEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSC---EEEE--ET---T--EEEEEEEEC-SSCEEEE
T ss_pred EEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccce---EEEE--EC---C--EEEEEcCCC-CCccCce
Confidence 344566665542 2357999999999999999877654332 1222 22 1 677776642 2334567
Q ss_pred EEEEECCCCcEEEecCCCCcceecCCCceEECCeee
Q 037535 179 VSVYSLRTNSWRRIRVDFPYYILHGWDGKFVDGHVH 214 (216)
Q Consensus 179 ~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~~G~ly 214 (216)
+++|+..+++|+.+. .+|..... ...+.++|.+|
T Consensus 126 ~~~~d~~~~~W~~~~-~~p~~r~~-~~~~~~~~~iy 159 (302)
T 2xn4_A 126 VEAYNIKSNEWFHVA-PMNTRRSS-VGVGVVGGLLY 159 (302)
T ss_dssp EEEEETTTTEEEEEC-CCSSCCBS-CEEEEETTEEE
T ss_pred EEEEeCCCCeEeecC-CCCCcccC-ceEEEECCEEE
Confidence 999999999999998 55533221 14456677766
No 14
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.48 E-value=0.0059 Score=47.46 Aligned_cols=82 Identities=13% Similarity=0.129 Sum_probs=55.4
Q ss_pred EEEEcCCCcceeecCCCCCCCCCccceeeeEEcccCCCCCeEEEEEEEEee-CCCCccEEEEEECCCCcEEEecCCCCcc
Q 037535 121 IAFWNPSTKEHLILPKYWGDLKDKVYMVVDGFGYDAVNDDYKVVRLVHFVR-ENVEYTEVSVYSLRTNSWRRIRVDFPYY 199 (216)
Q Consensus 121 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~-~~~~~~~~~vyss~t~~W~~~~~~~p~~ 199 (216)
++++||.|++|..+|+++..+... ....+ + + +|+.+++... .......+++|+..+++|+.+. .+|..
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~---~~~~~--~---~--~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~ 148 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLF---GLGEV--D---D--KIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK-NLPIK 148 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSC---EEEEE--T---T--EEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC-CCSSC
T ss_pred EEEEeCCCCcEEECCCCCcccccc---ceEEE--C---C--EEEEEcCccCCCCcccceEEEEeCCCCCEeECC-CCCCc
Confidence 889999999999998877654332 12221 2 1 6777776432 2344567999999999999998 66644
Q ss_pred eecCCCceEECCeee
Q 037535 200 ILHGWDGKFVDGHVH 214 (216)
Q Consensus 200 ~~~~~~~v~~~G~ly 214 (216)
... ...+.++|.+|
T Consensus 149 r~~-~~~~~~~~~iy 162 (318)
T 2woz_A 149 VYG-HNVISHNGMIY 162 (318)
T ss_dssp EES-CEEEEETTEEE
T ss_pred ccc-cEEEEECCEEE
Confidence 322 24556777776
No 15
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.48 E-value=0.0011 Score=51.53 Aligned_cols=99 Identities=8% Similarity=-0.005 Sum_probs=63.9
Q ss_pred EEecccceEEeecC---------CCcEEEEcCCCcceeecCCCCCCCCCccceeeeEEcccCCCCCeEEEEEEEEeeCCC
Q 037535 104 IIDSCNGLIALKND---------ENGIAFWNPSTKEHLILPKYWGDLKDKVYMVVDGFGYDAVNDDYKVVRLVHFVRENV 174 (216)
Q Consensus 104 ~~~s~~Gll~~~~~---------~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~ 174 (216)
.++..+|.|.+... ...+.++||.|++|..+++++..+... ... .++. |++.+++......
T Consensus 93 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~---~~~--~~~~-----~iyv~GG~~~~~~ 162 (315)
T 4asc_A 93 GLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGH---TVL--SHMD-----LVYVIGGKGSDRK 162 (315)
T ss_dssp EEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSC---EEE--EETT-----EEEEECCBCTTSC
T ss_pred eEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccce---eEE--EECC-----EEEEEeCCCCCCc
Confidence 44455777755421 357999999999999998876654332 111 1221 6777765423345
Q ss_pred CccEEEEEECCCCcEEEecCCCCcceecCCCceEECCeee
Q 037535 175 EYTEVSVYSLRTNSWRRIRVDFPYYILHGWDGKFVDGHVH 214 (216)
Q Consensus 175 ~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~~G~ly 214 (216)
....+++|+..+++|+.+. .+|..... ...+.++|.+|
T Consensus 163 ~~~~~~~yd~~~~~W~~~~-~~p~~r~~-~~~~~~~~~iy 200 (315)
T 4asc_A 163 CLNKMCVYDPKKFEWKELA-PMQTARSL-FGATVHDGRII 200 (315)
T ss_dssp BCCCEEEEETTTTEEEECC-CCSSCCBS-CEEEEETTEEE
T ss_pred ccceEEEEeCCCCeEEECC-CCCCchhc-eEEEEECCEEE
Confidence 5678999999999999998 55533221 24566677776
No 16
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.46 E-value=0.0027 Score=50.16 Aligned_cols=100 Identities=13% Similarity=0.046 Sum_probs=60.3
Q ss_pred EEecccceEEeecC-----------CCcEEEEcCCCcceeecCCCC-CCCCCccceeeeEEcccCCCCCeEEEEEEEEee
Q 037535 104 IIDSCNGLIALKND-----------ENGIAFWNPSTKEHLILPKYW-GDLKDKVYMVVDGFGYDAVNDDYKVVRLVHFVR 171 (216)
Q Consensus 104 ~~~s~~Gll~~~~~-----------~~~~~V~NP~T~~~~~LP~~~-~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~ 171 (216)
.++..+|.|.+... ..++.++||.|++|..+++++ ..+.. .....++. ||+.+++...
T Consensus 60 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~-----~~~~~~~~-----~iyv~GG~~~ 129 (357)
T 2uvk_A 60 TSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAG-----HVTFVHNG-----KAYVTGGVNQ 129 (357)
T ss_dssp EEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSS-----EEEEEETT-----EEEEEECCCH
T ss_pred eEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCccccc-----ceEEEECC-----EEEEEeCcCC
Confidence 34445666655421 257999999999999998866 22221 11111221 6777765321
Q ss_pred CC---------------------------------CCccEEEEEECCCCcEEEecCCCCcceecCCCceEECCeee
Q 037535 172 EN---------------------------------VEYTEVSVYSLRTNSWRRIRVDFPYYILHGWDGKFVDGHVH 214 (216)
Q Consensus 172 ~~---------------------------------~~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~~G~ly 214 (216)
.. .....+++|+..+++|+.+. .+|.........+.++|.+|
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~~~~~~~~~~~~~~iy 204 (357)
T 2uvk_A 130 NIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAG-ESPWYGTAGAAVVNKGDKTW 204 (357)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEE-ECSSCCCBSCEEEEETTEEE
T ss_pred CcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECC-CCCCCCcccccEEEECCEEE
Confidence 10 12368999999999999997 55533222224556677666
No 17
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.38 E-value=5e-05 Score=64.42 Aligned_cols=33 Identities=6% Similarity=0.117 Sum_probs=31.2
Q ss_pred CCCCHHHHHHHHhcC-CccchhhhccccHhhhhh
Q 037535 2 ASLPTDIKIDILSRL-PVKSLLRFKCMSKSFCSL 34 (216)
Q Consensus 2 ~~LP~Dll~eIl~rL-p~~sl~r~r~VcK~W~~~ 34 (216)
++||+|++.+||.+| |.+++.+++.|||+|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 369999999999999 899999999999999987
No 18
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.34 E-value=0.0023 Score=49.81 Aligned_cols=99 Identities=8% Similarity=0.098 Sum_probs=62.9
Q ss_pred EEecccceEEeec-C-------CCcEEEEcCCCcceeecCCCCCCCCCccceeeeEEcccCCCCCeEEEEEEEEeeCCCC
Q 037535 104 IIDSCNGLIALKN-D-------ENGIAFWNPSTKEHLILPKYWGDLKDKVYMVVDGFGYDAVNDDYKVVRLVHFVRENVE 175 (216)
Q Consensus 104 ~~~s~~Gll~~~~-~-------~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~ 175 (216)
.++..+|.|.+.. . ...+.++||.|++|..+++++..+... .. ..++ + +|+.+++.......
T Consensus 104 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~---~~--~~~~---~--~iyv~GG~~~~~~~ 173 (318)
T 2woz_A 104 GLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGH---NV--ISHN---G--MIYCLGGKTDDKKC 173 (318)
T ss_dssp EEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESC---EE--EEET---T--EEEEECCEESSSCB
T ss_pred ceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccccc---EE--EEEC---C--EEEEEcCCCCCCCc
Confidence 4444567665542 1 246899999999999998776543321 11 1122 1 67777664333445
Q ss_pred ccEEEEEECCCCcEEEecCCCCcceecCCCceEECCeee
Q 037535 176 YTEVSVYSLRTNSWRRIRVDFPYYILHGWDGKFVDGHVH 214 (216)
Q Consensus 176 ~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~~G~ly 214 (216)
...+++|+..+++|+.+. .+|..... ...+.++|.+|
T Consensus 174 ~~~~~~yd~~~~~W~~~~-~~p~~r~~-~~~~~~~~~iy 210 (318)
T 2woz_A 174 TNRVFIYNPKKGDWKDLA-PMKTPRSM-FGVAIHKGKIV 210 (318)
T ss_dssp CCCEEEEETTTTEEEEEC-CCSSCCBS-CEEEEETTEEE
T ss_pred cceEEEEcCCCCEEEECC-CCCCCccc-ceEEEECCEEE
Confidence 677999999999999998 55533221 14566777776
No 19
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.31 E-value=0.0053 Score=47.52 Aligned_cols=98 Identities=12% Similarity=0.096 Sum_probs=62.2
Q ss_pred EEecccceEEeec------CCCcEEEEcCCCcceeecCCCCCCCCCccceeeeEEcccCCCCCeEEEEEEEEeeCCCCcc
Q 037535 104 IIDSCNGLIALKN------DENGIAFWNPSTKEHLILPKYWGDLKDKVYMVVDGFGYDAVNDDYKVVRLVHFVRENVEYT 177 (216)
Q Consensus 104 ~~~s~~Gll~~~~------~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~ 177 (216)
.+...+|.|.+.. ....+.++||.|++|..+++++..+... .... ++ + +++.+++.. ......
T Consensus 116 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~---~~~~--~~---~--~iyv~GG~~-~~~~~~ 184 (308)
T 1zgk_A 116 GVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGV---GVAV--LN---R--LLYAVGGFD-GTNRLN 184 (308)
T ss_dssp EEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSC---EEEE--ET---T--EEEEECCBC-SSCBCC
T ss_pred EEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccce---EEEE--EC---C--EEEEEeCCC-CCCcCc
Confidence 3444577776543 2457999999999999998876554332 1111 22 1 677765532 223367
Q ss_pred EEEEEECCCCcEEEecCCCCcceecCCCceEECCeee
Q 037535 178 EVSVYSLRTNSWRRIRVDFPYYILHGWDGKFVDGHVH 214 (216)
Q Consensus 178 ~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~~G~ly 214 (216)
.+++|+..+++|+.+. .+|..... ...+.++|.+|
T Consensus 185 ~~~~yd~~~~~W~~~~-~~p~~r~~-~~~~~~~~~iy 219 (308)
T 1zgk_A 185 SAECYYPERNEWRMIT-AMNTIRSG-AGVCVLHNCIY 219 (308)
T ss_dssp CEEEEETTTTEEEECC-CCSSCCBS-CEEEEETTEEE
T ss_pred eEEEEeCCCCeEeeCC-CCCCcccc-ceEEEECCEEE
Confidence 7999999999999988 55543221 14556677766
No 20
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.29 E-value=0.0058 Score=46.99 Aligned_cols=98 Identities=10% Similarity=0.128 Sum_probs=61.8
Q ss_pred EEecccceEEeec------CCCcEEEEcCCCcceeecCCCCCCCCCccceeeeEEcccCCCCCeEEEEEEEEeeCCCCcc
Q 037535 104 IIDSCNGLIALKN------DENGIAFWNPSTKEHLILPKYWGDLKDKVYMVVDGFGYDAVNDDYKVVRLVHFVRENVEYT 177 (216)
Q Consensus 104 ~~~s~~Gll~~~~------~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~ 177 (216)
.+...+|.+.+.. ....+.++||.|++|..+++.+..+... .. ..++ + +++.+++. .......
T Consensus 107 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~---~~--~~~~---~--~iyv~GG~-~~~~~~~ 175 (301)
T 2vpj_A 107 GATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGA---GL--VVAS---G--VIYCLGGY-DGLNILN 175 (301)
T ss_dssp EEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSC---EE--EEET---T--EEEEECCB-CSSCBCC
T ss_pred eEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccc---eE--EEEC---C--EEEEECCC-CCCcccc
Confidence 4444577776553 1457999999999999998776544321 11 1222 1 67766542 2223457
Q ss_pred EEEEEECCCCcEEEecCCCCcceecCCCceEECCeee
Q 037535 178 EVSVYSLRTNSWRRIRVDFPYYILHGWDGKFVDGHVH 214 (216)
Q Consensus 178 ~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~~G~ly 214 (216)
.+++|+..+++|+.+. .+|.... ....+.++|.+|
T Consensus 176 ~~~~~d~~~~~W~~~~-~~p~~r~-~~~~~~~~~~i~ 210 (301)
T 2vpj_A 176 SVEKYDPHTGHWTNVT-PMATKRS-GAGVALLNDHIY 210 (301)
T ss_dssp CEEEEETTTTEEEEEC-CCSSCCB-SCEEEEETTEEE
T ss_pred eEEEEeCCCCcEEeCC-CCCcccc-cceEEEECCEEE
Confidence 7999999999999997 5554322 124556667665
No 21
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.29 E-value=0.0051 Score=47.32 Aligned_cols=98 Identities=11% Similarity=0.011 Sum_probs=61.9
Q ss_pred EEecccceEEeec------CCCcEEEEcCCCcc---eeecCCCCCCCCCccceeeeEEcccCCCCCeEEEEEEEEeeCCC
Q 037535 104 IIDSCNGLIALKN------DENGIAFWNPSTKE---HLILPKYWGDLKDKVYMVVDGFGYDAVNDDYKVVRLVHFVRENV 174 (216)
Q Consensus 104 ~~~s~~Gll~~~~------~~~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~ 174 (216)
.+...+|.|++.. ...+++++||.|++ |..+++++..+... .... ++ + +++.+++.. ...
T Consensus 57 ~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~---~~~~--~~---~--~lyv~GG~~-~~~ 125 (301)
T 2vpj_A 57 ASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLA---GATT--LG---D--MIYVSGGFD-GSR 125 (301)
T ss_dssp EEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSC---EEEE--ET---T--EEEEECCBC-SSC
T ss_pred cEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccce---eEEE--EC---C--EEEEEcccC-CCc
Confidence 3444566665542 23579999999999 99998877654332 1122 22 1 677775432 223
Q ss_pred CccEEEEEECCCCcEEEecCCCCcceecCCCceEECCeee
Q 037535 175 EYTEVSVYSLRTNSWRRIRVDFPYYILHGWDGKFVDGHVH 214 (216)
Q Consensus 175 ~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~~G~ly 214 (216)
....+++|+..+++|+.+. .+|.... ....+.++|.+|
T Consensus 126 ~~~~~~~~d~~~~~W~~~~-~~p~~r~-~~~~~~~~~~iy 163 (301)
T 2vpj_A 126 RHTSMERYDPNIDQWSMLG-DMQTARE-GAGLVVASGVIY 163 (301)
T ss_dssp BCCEEEEEETTTTEEEEEE-ECSSCCB-SCEEEEETTEEE
T ss_pred ccceEEEEcCCCCeEEECC-CCCCCcc-cceEEEECCEEE
Confidence 3568999999999999987 5553221 124556677776
No 22
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.23 E-value=0.0039 Score=48.06 Aligned_cols=99 Identities=12% Similarity=0.065 Sum_probs=62.0
Q ss_pred EEecccceEEeec------CCCcEEEEcCCCcceeecCCCCCCCCCccceeeeEEcccCCCCCeEEEEEEEEeeCC-CCc
Q 037535 104 IIDSCNGLIALKN------DENGIAFWNPSTKEHLILPKYWGDLKDKVYMVVDGFGYDAVNDDYKVVRLVHFVREN-VEY 176 (216)
Q Consensus 104 ~~~s~~Gll~~~~------~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~-~~~ 176 (216)
.+...+|.+.+.. ....+.++||.|++|..+++++..+... ... .++ + +++.+++..... ...
T Consensus 103 ~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~---~~~--~~~---~--~iyv~GG~~~~~~~~~ 172 (302)
T 2xn4_A 103 GAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSV---GVG--VVG---G--LLYAVGGYDVASRQCL 172 (302)
T ss_dssp EEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSC---EEE--EET---T--EEEEECCEETTTTEEC
T ss_pred EEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCc---eEE--EEC---C--EEEEEeCCCCCCCccc
Confidence 3444577775542 1247899999999999998876554332 111 122 1 677776543221 235
Q ss_pred cEEEEEECCCCcEEEecCCCCcceecCCCceEECCeee
Q 037535 177 TEVSVYSLRTNSWRRIRVDFPYYILHGWDGKFVDGHVH 214 (216)
Q Consensus 177 ~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~~G~ly 214 (216)
..+++|+..+++|+.+. .+|..... ...+.++|.+|
T Consensus 173 ~~~~~yd~~~~~W~~~~-~~p~~r~~-~~~~~~~~~iy 208 (302)
T 2xn4_A 173 STVECYNATTNEWTYIA-EMSTRRSG-AGVGVLNNLLY 208 (302)
T ss_dssp CCEEEEETTTTEEEEEC-CCSSCCBS-CEEEEETTEEE
T ss_pred cEEEEEeCCCCcEEECC-CCcccccc-ccEEEECCEEE
Confidence 67999999999999998 55543221 14556677776
No 23
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.19 E-value=0.0035 Score=49.52 Aligned_cols=99 Identities=13% Similarity=0.107 Sum_probs=61.1
Q ss_pred EEecccceEEeec--CCCcEEEEcCC--CcceeecCCCC-CCCCCccceeeeEEcccCCCCCeEEEEEEEEee----CCC
Q 037535 104 IIDSCNGLIALKN--DENGIAFWNPS--TKEHLILPKYW-GDLKDKVYMVVDGFGYDAVNDDYKVVRLVHFVR----ENV 174 (216)
Q Consensus 104 ~~~s~~Gll~~~~--~~~~~~V~NP~--T~~~~~LP~~~-~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~----~~~ 174 (216)
..+..+|.|.+.. ...+++++||. +++|..+++++ ..+... .... ++ + +|+.+++... ...
T Consensus 14 ~~~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~---~~~~--~~---~--~lyv~GG~~~~~~~~~~ 83 (357)
T 2uvk_A 14 TGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQA---TSAF--ID---G--NLYVFGGIGKNSEGLTQ 83 (357)
T ss_dssp EEEEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSC---EEEE--ET---T--EEEEECCEEECTTSCEE
T ss_pred EEEEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccc---eEEE--EC---C--EEEEEcCCCCCCCccce
Confidence 3344477775543 34689999998 49999998876 333221 1222 22 1 6777765411 113
Q ss_pred CccEEEEEECCCCcEEEecCCCC-cceecCCCceEECCeee
Q 037535 175 EYTEVSVYSLRTNSWRRIRVDFP-YYILHGWDGKFVDGHVH 214 (216)
Q Consensus 175 ~~~~~~vyss~t~~W~~~~~~~p-~~~~~~~~~v~~~G~ly 214 (216)
....+++|+..+++|+.+. .++ ... .....+.++|.+|
T Consensus 84 ~~~~v~~yd~~~~~W~~~~-~~~p~~r-~~~~~~~~~~~iy 122 (357)
T 2uvk_A 84 VFNDVHKYNPKTNSWVKLM-SHAPMGM-AGHVTFVHNGKAY 122 (357)
T ss_dssp ECCCEEEEETTTTEEEECS-CCCSSCC-SSEEEEEETTEEE
T ss_pred eeccEEEEeCCCCcEEECC-CCCCccc-ccceEEEECCEEE
Confidence 3567899999999999998 444 211 1113466888887
No 24
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.52 E-value=0.0061 Score=53.03 Aligned_cols=97 Identities=8% Similarity=0.048 Sum_probs=56.5
Q ss_pred ccceEEeec-----CCCcEEEEcCCCcceeecC-CC-----CCCCCCccceeeeEEcccCCCCCeEEEEEEEEeeCCCCc
Q 037535 108 CNGLIALKN-----DENGIAFWNPSTKEHLILP-KY-----WGDLKDKVYMVVDGFGYDAVNDDYKVVRLVHFVRENVEY 176 (216)
Q Consensus 108 ~~Gll~~~~-----~~~~~~V~NP~T~~~~~LP-~~-----~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~ 176 (216)
.+|.|++.+ ...+++++||.|++|..++ +. +..+.. +....+..+ + +|+.+++........
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~---hs~~~~~~~---~--~lyv~GG~~~~~~~~ 467 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMC---HTFTTISRN---N--QLLLIGGRKAPHQGL 467 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBS---CEEEEETTT---T--EEEEECCBSSTTCBC
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccc---eEEEEEccC---C--EEEEEcCCCCCCCcc
Confidence 455554442 2357999999999999998 52 222211 122222111 1 577776533222245
Q ss_pred cEEEEEECCCCcEEEecCCCCcceecCCCceEE-CCeee
Q 037535 177 TEVSVYSLRTNSWRRIRVDFPYYILHGWDGKFV-DGHVH 214 (216)
Q Consensus 177 ~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~-~G~ly 214 (216)
..+++|+..+++|+.+. .+|..... ...+.+ +|.+|
T Consensus 468 ~dv~~yd~~t~~W~~~~-~~p~~R~~-h~~~~~~~~~iy 504 (695)
T 2zwa_A 468 SDNWIFDMKTREWSMIK-SLSHTRFR-HSACSLPDGNVL 504 (695)
T ss_dssp CCCEEEETTTTEEEECC-CCSBCCBS-CEEEECTTSCEE
T ss_pred ccEEEEeCCCCcEEECC-CCCCCccc-ceEEEEcCCEEE
Confidence 67999999999999998 66542221 123343 66665
No 25
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.33 E-value=0.024 Score=48.86 Aligned_cols=80 Identities=16% Similarity=0.184 Sum_probs=53.1
Q ss_pred EecccceEEeec--CCCcEEEEcCCCcceeecCCCCCCCCCccceeeeEEcccCCCCCeEEEEEEEEeeCCCCccEEEEE
Q 037535 105 IDSCNGLIALKN--DENGIAFWNPSTKEHLILPKYWGDLKDKVYMVVDGFGYDAVNDDYKVVRLVHFVRENVEYTEVSVY 182 (216)
Q Consensus 105 ~~s~~Gll~~~~--~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~vy 182 (216)
+...+|.|++.. ....+.++||.|++|..+++++..+... ....+ -|. ||+.+++..+.......+++|
T Consensus 249 ~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~---s~~~~-~dg-----~iyv~GG~~~~~~~~~~~e~y 319 (656)
T 1k3i_A 249 SMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQ---SSATM-SDG-----RVFTIGGSWSGGVFEKNGEVY 319 (656)
T ss_dssp EECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSC---EEEEC-TTS-----CEEEECCCCCSSSCCCCEEEE
T ss_pred cCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCcccccc---ceEEe-cCC-----eEEEEeCcccCCcccccceEe
Confidence 334677776653 3458999999999999998876654331 11111 021 677776532233345779999
Q ss_pred ECCCCcEEEec
Q 037535 183 SLRTNSWRRIR 193 (216)
Q Consensus 183 ss~t~~W~~~~ 193 (216)
+..+++|+.+.
T Consensus 320 d~~t~~W~~~~ 330 (656)
T 1k3i_A 320 SPSSKTWTSLP 330 (656)
T ss_dssp ETTTTEEEEET
T ss_pred CCCCCcceeCC
Confidence 99999999874
No 26
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.81 E-value=0.072 Score=46.31 Aligned_cols=99 Identities=9% Similarity=0.155 Sum_probs=57.7
Q ss_pred ccceEEeec---CCCcEEEEcCCCcceeecCC---CCCCCCCccceeeeEEcccCCCCCeEEEEEEEEeeCC-CCccEEE
Q 037535 108 CNGLIALKN---DENGIAFWNPSTKEHLILPK---YWGDLKDKVYMVVDGFGYDAVNDDYKVVRLVHFVREN-VEYTEVS 180 (216)
Q Consensus 108 ~~Gll~~~~---~~~~~~V~NP~T~~~~~LP~---~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~-~~~~~~~ 180 (216)
++|.|.+.+ ....+.++||.|++|..+++ .+..+.. ..+..++... -+++.+++....+ .....++
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~-----~~a~v~~~~~--~~iyv~GG~~~~~~~~~~~v~ 571 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLV-----SAGLEFDPVS--KQGIILGGGFMDQTTVSDKAI 571 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCB-----SCEEEEETTT--TEEEEECCBCTTSSCBCCEEE
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccc-----eeEEEEeCCC--CEEEEECCcCCCCCeeeCcEE
Confidence 377776553 11289999999999999986 3322221 2223333321 2677776532222 3457899
Q ss_pred EEECCCCc------EEEecCCCCcceecCCCceEEC-Ceee
Q 037535 181 VYSLRTNS------WRRIRVDFPYYILHGWDGKFVD-GHVH 214 (216)
Q Consensus 181 vyss~t~~------W~~~~~~~p~~~~~~~~~v~~~-G~ly 214 (216)
+|+..++. |+.+. ..|.........+.++ |.+|
T Consensus 572 ~yd~~~~~w~~~~~W~~~~-~~p~~~R~~~~~~~~~~~~iy 611 (695)
T 2zwa_A 572 IFKYDAENATEPITVIKKL-QHPLFQRYGSQIKYITPRKLL 611 (695)
T ss_dssp EEEECTTCSSCCEEEEEEE-ECGGGCCBSCEEEEEETTEEE
T ss_pred EEEccCCccccceEEEEcC-CCCCCCcccceEEEeCCCEEE
Confidence 99999999 88876 3321111122345555 6665
No 27
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=94.27 E-value=0.033 Score=47.93 Aligned_cols=81 Identities=16% Similarity=0.048 Sum_probs=49.2
Q ss_pred cEEEEcCCCcceeecCCCCCCCCCccceeeeEEcccCCCCCeEEEEEEEEeeCCCCccEEEEEECCCCcEEEecCCCCcc
Q 037535 120 GIAFWNPSTKEHLILPKYWGDLKDKVYMVVDGFGYDAVNDDYKVVRLVHFVRENVEYTEVSVYSLRTNSWRRIRVDFPYY 199 (216)
Q Consensus 120 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~p~~ 199 (216)
.+.++||.|++|..++.++..+... .....+..|. +|+.+++. ....+++|+..+++|..+. .++..
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~--~~~~~~~~~g-----~lyv~GG~-----~~~~v~~yd~~t~~W~~~~-~~~~~ 286 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMF--CPGISMDGNG-----QIVVTGGN-----DAKKTSLYDSSSDSWIPGP-DMQVA 286 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCS--SCEEEECTTS-----CEEEECSS-----STTCEEEEEGGGTEEEECC-CCSSC
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCc--cccccCCCCC-----CEEEeCCC-----CCCceEEecCcCCceeECC-CCCcc
Confidence 6899999999999987765433221 1112222222 56666431 1237999999999999987 65532
Q ss_pred eecCCCceEE-CCeee
Q 037535 200 ILHGWDGKFV-DGHVH 214 (216)
Q Consensus 200 ~~~~~~~v~~-~G~ly 214 (216)
... ...+.+ +|.+|
T Consensus 287 R~~-~s~~~~~dg~iy 301 (656)
T 1k3i_A 287 RGY-QSSATMSDGRVF 301 (656)
T ss_dssp CSS-CEEEECTTSCEE
T ss_pred ccc-cceEEecCCeEE
Confidence 211 123444 66665
No 28
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=75.89 E-value=1.4 Score=23.39 Aligned_cols=16 Identities=44% Similarity=0.619 Sum_probs=12.6
Q ss_pred CCCCHHHHHHHHhcCC
Q 037535 2 ASLPTDIKIDILSRLP 17 (216)
Q Consensus 2 ~~LP~Dll~eIl~rLp 17 (216)
.+||.|+.+|||+--.
T Consensus 22 ~~LP~dIQ~Ells~~~ 37 (48)
T 2kwv_A 22 KQLPADIQEEILSGKS 37 (48)
T ss_dssp TTSCHHHHHHHTTCCC
T ss_pred HHCcHHHHHHHHhcch
Confidence 4689999999987654
No 29
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=66.56 E-value=13 Score=24.02 Aligned_cols=42 Identities=12% Similarity=0.101 Sum_probs=28.7
Q ss_pred CcEEEEcCCCcceeecCCCCCCCCCccceeeeEEcccCCCCCeEEEEEE
Q 037535 119 NGIAFWNPSTKEHLILPKYWGDLKDKVYMVVDGFGYDAVNDDYKVVRLV 167 (216)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~ 167 (216)
-.+++.||.|+.|...-.... .....+..|...+.|+|+...
T Consensus 11 A~V~~~d~~~~~W~p~~~~~g-------~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 11 AAVMVYDDANKKWVPAGGSTG-------FSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEEETTTTEEEEGGGCCS-------CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCceEECCCCCC-------ceEEEEEEECCCCEEEEEEEE
Confidence 468899999997754331111 134667788888899999764
No 30
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=62.15 E-value=19 Score=23.58 Aligned_cols=40 Identities=23% Similarity=0.322 Sum_probs=28.2
Q ss_pred CcEEEEcCCCc-ceeecCCCCCCCCCccceeeeEEcccCCCCCeEEEEEE
Q 037535 119 NGIAFWNPSTK-EHLILPKYWGDLKDKVYMVVDGFGYDAVNDDYKVVRLV 167 (216)
Q Consensus 119 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~ 167 (216)
-.+++.||.|+ .|...-... ....+-+|+..+.|+|+.+.
T Consensus 11 A~V~~~D~~tk~~W~p~g~~~---------~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 11 AHVFQIDPNTKKNWVPTSKHA---------VTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEEECTTTSCSEEESCSSC---------EEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCCceEeCCCCc---------eEEEEEEcCCCCEEEEEEcc
Confidence 46889999996 886432221 24456678888889999853
No 31
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=55.67 E-value=70 Score=25.01 Aligned_cols=29 Identities=24% Similarity=0.473 Sum_probs=20.5
Q ss_pred cccceEEeecCCCcEEEEcCCCcceeecCC
Q 037535 107 SCNGLIALKNDENGIAFWNPSTKEHLILPK 136 (216)
Q Consensus 107 s~~Gll~~~~~~~~~~V~NP~T~~~~~LP~ 136 (216)
|.+++|-+. ..+.++|||..|++...+-.
T Consensus 114 S~~n~lAvg-ld~tV~lWd~~tg~~~~~~~ 142 (420)
T 4gga_A 114 SSGNVLAVA-LDNSVYLWSASSGDILQLLQ 142 (420)
T ss_dssp CTTSEEEEE-ETTEEEEEETTTCCEEEEEE
T ss_pred CCCCEEEEE-eCCEEEEEECCCCCEEEEEE
Confidence 445655443 35789999999998876543
No 32
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=54.97 E-value=45 Score=24.45 Aligned_cols=28 Identities=25% Similarity=0.472 Sum_probs=19.9
Q ss_pred cccceEEeecCCCcEEEEcCCCcceeecC
Q 037535 107 SCNGLIALKNDENGIAFWNPSTKEHLILP 135 (216)
Q Consensus 107 s~~Gll~~~~~~~~~~V~NP~T~~~~~LP 135 (216)
|.+|+|-.. ..+.+.|||..|++...+-
T Consensus 34 S~~~~lAvg-~D~tV~iWd~~tg~~~~~~ 61 (318)
T 4ggc_A 34 SSGNVLAVA-LDNSVYLWSASSGDILQLL 61 (318)
T ss_dssp CTTSEEEEE-ETTEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEE-eCCEEEEEECCCCCEEEEE
Confidence 456665443 3568999999999877643
No 33
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.11 E-value=11 Score=22.26 Aligned_cols=24 Identities=17% Similarity=0.332 Sum_probs=18.7
Q ss_pred eEEeecCCCcEEEEcCCCcceeec
Q 037535 111 LIALKNDENGIAFWNPSTKEHLIL 134 (216)
Q Consensus 111 ll~~~~~~~~~~V~NP~T~~~~~L 134 (216)
+.......++.|.+||.|++...-
T Consensus 22 W~~v~T~dGR~fyyN~~Tk~S~We 45 (73)
T 2dk7_A 22 WCVVWTGDERVFFYNPTTRLSMWD 45 (73)
T ss_dssp CEEEEESSSCEEEEETTTTEECSS
T ss_pred cEEEECCCCCEEEecCcccceecc
Confidence 555556778899999999997754
No 34
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=49.53 E-value=32 Score=23.93 Aligned_cols=40 Identities=23% Similarity=0.322 Sum_probs=27.4
Q ss_pred CcEEEEcCCCc-ceeecCCCCCCCCCccceeeeEEcccCCCCCeEEEEEE
Q 037535 119 NGIAFWNPSTK-EHLILPKYWGDLKDKVYMVVDGFGYDAVNDDYKVVRLV 167 (216)
Q Consensus 119 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~ 167 (216)
-.+++.||.|+ .|+..-... ....+-+|...+.|+|+.+.
T Consensus 16 A~Vm~~D~~tk~~WvP~g~~~---------~~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 16 AHVFQIDPNTKKNWVPTSKHA---------VTVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEEECTTSSCCSEESCSSC---------EEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEECCCCCCceeecCCCC---------eEEEEEEcCCCCEEEEEEcc
Confidence 46889999997 786432221 23345578888889999864
No 35
>1ugj_A Riken cDNA 2310057J16 protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.41.1.3
Probab=47.41 E-value=30 Score=23.35 Aligned_cols=74 Identities=15% Similarity=0.226 Sum_probs=42.5
Q ss_pred eEEeecC---CCcEEEEcCCCcceeecCCCCCCCCCccceeeeEEcccCCCCCeEEEEEEEEeeCCCCccEEEEEECCCC
Q 037535 111 LIALKND---ENGIAFWNPSTKEHLILPKYWGDLKDKVYMVVDGFGYDAVNDDYKVVRLVHFVRENVEYTEVSVYSLRTN 187 (216)
Q Consensus 111 ll~~~~~---~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~vyss~t~ 187 (216)
+|++.+. -+.+|.+||.+.+..+|-......-.. ......+-||..+++|+.+--. .-...+.-++....
T Consensus 57 lILfrd~~~qfRalY~~~~~~e~~~Ki~G~GP~~i~~-~mV~~~~KYdSg~K~F~~i~sk------~~s~tvDAvtl~~~ 129 (141)
T 1ugj_A 57 LILFRDSSCQFRALYTLSGETEELSRLAGYGPRTVTP-AMVEGIYKYNSDRKRFTQIPAK------TMSMSVDAFTIQGH 129 (141)
T ss_dssp EEEESSSSCSEEEEEEECTTSSCEEEEESSSCSEECT-TTEEEEEEEETTTTEEEECSSS------SCCTTCSEEEECST
T ss_pred EEEEecCCCceEEEEEEeCCCceEEEEECCCcCcccH-HHHHHHhccCCCCceecccCcc------ccceeEEEEEEhhH
Confidence 4566652 357999999998877763321111111 2256667788888888876421 22333455566666
Q ss_pred cEEE
Q 037535 188 SWRR 191 (216)
Q Consensus 188 ~W~~ 191 (216)
-|-.
T Consensus 130 ~w~~ 133 (141)
T 1ugj_A 130 LWQS 133 (141)
T ss_dssp TTSC
T ss_pred hhcC
Confidence 6643
No 36
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=43.98 E-value=38 Score=21.84 Aligned_cols=43 Identities=14% Similarity=0.188 Sum_probs=29.0
Q ss_pred CcEEEEcCCCcceeecCCCCCCCCCccceeeeEEcccCCCCCeEEEEEE
Q 037535 119 NGIAFWNPSTKEHLILPKYWGDLKDKVYMVVDGFGYDAVNDDYKVVRLV 167 (216)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~ 167 (216)
-.++++||.|+.|. |....... .....+..|...+.|.|+...
T Consensus 11 A~V~~~d~~~~~W~--p~~~g~~g----vs~V~~~~d~~~~~yrI~~~~ 53 (115)
T 1egx_A 11 ATVMLYDDGNKRWL--PAGTGPQA----FSRVQIYHNPTANSFRVVGRK 53 (115)
T ss_dssp EECBEECTTTSSCC--BSSCSCCC----CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCcee--ECCCCCCC----ccEEEEEEeCCCCEEEEEEEE
Confidence 36788999999975 44321000 134667788888999998874
No 37
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=36.62 E-value=66 Score=21.13 Aligned_cols=43 Identities=5% Similarity=-0.190 Sum_probs=26.0
Q ss_pred CcEEEEcCCCcceeecCCCCCCCCCccceeeeEEcc---cCCCCCeEEEEEE
Q 037535 119 NGIAFWNPSTKEHLILPKYWGDLKDKVYMVVDGFGY---DAVNDDYKVVRLV 167 (216)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~---d~~~~~ykvv~~~ 167 (216)
-.++++||.|+.|...-.. ... ...+.+.. |...+.|+|+...
T Consensus 20 A~Vm~~D~~~~~W~p~~~g--~ls----~v~v~~~~~~~d~~~~~yrI~~~~ 65 (126)
T 2jp2_A 20 AVVMTRDDSSGGWFPQEGG--GIS----RVGVCKVMHPEGNGRSGFLIHGER 65 (126)
T ss_dssp EEEEEECTTSSSSEECSCC--SCE----EEEEECCBCTTCSSCBCEEEEEEE
T ss_pred EEEeeEcCCCCCEeeCCCC--Ccc----cEEEEEecCCCCCCCCEEEEEEEE
Confidence 4688899999988644322 110 01222333 5667889998864
No 38
>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A
Probab=35.62 E-value=51 Score=21.35 Aligned_cols=43 Identities=16% Similarity=0.002 Sum_probs=21.7
Q ss_pred CcEEEEcCCCcceeecCCCCCCCCCccceeeeEEcc---cCCCCCeEEEEEE
Q 037535 119 NGIAFWNPSTKEHLILPKYWGDLKDKVYMVVDGFGY---DAVNDDYKVVRLV 167 (216)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~---d~~~~~ykvv~~~ 167 (216)
-.++.+||.|+.|...-.. ... . ..+.+.. |...+.|+|+...
T Consensus 11 A~V~~~d~~~~~W~p~~~g--~ls---~-v~i~~~~~~~d~~~~~yrIv~~~ 56 (118)
T 1xod_A 11 AVVMTRDDSSGGWLQLGGG--GLS---S-VTVSKTLQPGDSGGTEFLVHGER 56 (118)
T ss_dssp EEEEEECSSSSCEEEGGGC--CCE---E-EEEECC---------CCEEEEEE
T ss_pred EEEeeEcCCCCCEeeCCCC--Ccc---c-EEEEEecCcCCCCCCEEEEEEEE
Confidence 3688899999988654322 110 0 1122222 5566889999764
No 39
>1e0n_A Hypothetical protein; YJQ8WW domain, WW domain, saccharomyces cerevisae, YJQ8 protein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1
Probab=32.64 E-value=41 Score=15.39 Aligned_cols=18 Identities=17% Similarity=0.339 Sum_probs=13.0
Q ss_pred CCCcEEEEcCCCcceeec
Q 037535 117 DENGIAFWNPSTKEHLIL 134 (216)
Q Consensus 117 ~~~~~~V~NP~T~~~~~L 134 (216)
..+..+-+|..|++...=
T Consensus 8 ~~g~~YYyN~~T~~s~We 25 (27)
T 1e0n_A 8 ENGRPLYYNAEQKTKLHY 25 (27)
T ss_dssp SSSSEEEEETTTTEEESS
T ss_pred CCCCeEEEECCCCCEecc
Confidence 445667789999987653
No 40
>1tns_A MU-transposase; DNA-binding protein; NMR {Enterobacteria phage MU} SCOP: a.6.1.7 PDB: 1tnt_A
Probab=31.19 E-value=25 Score=20.91 Aligned_cols=18 Identities=33% Similarity=0.392 Sum_probs=14.8
Q ss_pred CCCCCHHHHHHHHhcCCc
Q 037535 1 MASLPTDIKIDILSRLPV 18 (216)
Q Consensus 1 ~~~LP~Dll~eIl~rLp~ 18 (216)
|+.||.++..+|..+-..
T Consensus 50 issLP~~~~~~l~~~~~~ 67 (76)
T 1tns_A 50 ANSLPVEAKAALLLRQGE 67 (76)
T ss_dssp TTTSCHHHHHHHHHHTSS
T ss_pred eccCCHHHHHHHHHHhhh
Confidence 678999999999887654
No 41
>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A
Probab=31.10 E-value=99 Score=19.35 Aligned_cols=43 Identities=19% Similarity=0.316 Sum_probs=25.7
Q ss_pred EEcccCCCCCeEEEEEEEEeeCCCCccEEEEEECCCCcEEEec
Q 037535 151 GFGYDAVNDDYKVVRLVHFVRENVEYTEVSVYSLRTNSWRRIR 193 (216)
Q Consensus 151 ~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~vyss~t~~W~~~~ 193 (216)
.|-.+..++.|.++.+............++|=.++++.|..+.
T Consensus 5 ~F~V~~gs~~~~l~vlv~nv~G~gdI~~V~ik~s~t~~W~~M~ 47 (100)
T 3ft1_A 5 TFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLT 47 (100)
T ss_dssp EEEECTTCBTTEEEEEEEEECTTCCEEEEEEECTTCCCCEECE
T ss_pred EEEEecCCCcceEEEEEEEcCCCccEEEEEEEeCCCCCeEEec
Confidence 3444554445555554444444566777888888776676665
No 42
>3enb_A PRE-mRNA-processing-splicing factor 8; PRP8 domain IV, beta finger, RNAse H, spliceosome, U5-220K, mutation, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: c.55.3.14 PDB: 3lru_A
Probab=31.04 E-value=31 Score=24.78 Aligned_cols=27 Identities=22% Similarity=0.357 Sum_probs=17.2
Q ss_pred ecccceEEeecCCCcEEEEcCCCccee
Q 037535 106 DSCNGLIALKNDENGIAFWNPSTKEHL 132 (216)
Q Consensus 106 ~s~~Gll~~~~~~~~~~V~NP~T~~~~ 132 (216)
..-.|-+-.....+.++++||.||+-.
T Consensus 24 ~T~eGn~~tkpiNG~ifIfnP~TGqLf 50 (222)
T 3enb_A 24 KTFEGNLTTKPINGAIFIFNPRTGQLF 50 (222)
T ss_dssp ECTTSCEEEEEECEEEEEECTTTCEEE
T ss_pred eccCCCceeecccceEEEEeCCCCcEE
Confidence 344444444444567888999999854
No 43
>3s3x_D Psalmotoxin-1; acid-sensing, ION channel, membrane protein, sodium channel, membrane, glycoprotein, ION transport, membrane; HET: NAG; 2.99A {Psalmopoeus cambridgei} PDB: 2kni_A 1lmm_A 4fz0_M* 4fz1_D*
Probab=25.79 E-value=36 Score=16.20 Aligned_cols=22 Identities=32% Similarity=0.570 Sum_probs=14.2
Q ss_pred ecccceEEeecCCCcEEEEcCCC
Q 037535 106 DSCNGLIALKNDENGIAFWNPST 128 (216)
Q Consensus 106 ~s~~Gll~~~~~~~~~~V~NP~T 128 (216)
++|.||-|... .+.+-||-|-|
T Consensus 15 dcceglecwkr-rrsfevcvpkt 36 (37)
T 3s3x_D 15 DCCEGLECWKR-RRSFEVCVPKT 36 (37)
T ss_dssp CBCTTEEEECC-SSSCCEEEECC
T ss_pred chhhhHHHHHh-ccceeeecCCC
Confidence 57899999874 24455565544
No 44
>3e9l_A PRE-mRNA-processing-splicing factor 8; nucleotidyl transfer, disease mutation, MRN splicing, nucleus, phosphoprotein, retinitis pigmentosa; 1.95A {Homo sapiens} SCOP: c.55.3.14
Probab=25.53 E-value=44 Score=24.54 Aligned_cols=28 Identities=21% Similarity=0.318 Sum_probs=17.9
Q ss_pred EecccceEEeecCCCcEEEEcCCCccee
Q 037535 105 IDSCNGLIALKNDENGIAFWNPSTKEHL 132 (216)
Q Consensus 105 ~~s~~Gll~~~~~~~~~~V~NP~T~~~~ 132 (216)
-..-.|-+-.....+.++++||.||+-.
T Consensus 32 h~T~eGn~~tkpiNG~ifIfnP~TGqLf 59 (257)
T 3e9l_A 32 HKTFEGNLTTKPINGAIFIFNPRTGQLF 59 (257)
T ss_dssp EECSSSCEEEEEECEEEEEECTTTCEEE
T ss_pred EeccCCCceeccccceEEEEeCCCCcEE
Confidence 3344455544444567888999999854
No 45
>3sbt_A PRE-mRNA-splicing factor 8; rnaseh like domain, VHS like domain, U5 snRNP assembly; 1.80A {Saccharomyces cerevisiae} SCOP: c.55.3.14 PDB: 3e66_A 3e9o_A* 3e9p_A
Probab=25.00 E-value=46 Score=24.53 Aligned_cols=29 Identities=24% Similarity=0.248 Sum_probs=18.4
Q ss_pred EEecccceEEeecCCCcEEEEcCCCccee
Q 037535 104 IIDSCNGLIALKNDENGIAFWNPSTKEHL 132 (216)
Q Consensus 104 ~~~s~~Gll~~~~~~~~~~V~NP~T~~~~ 132 (216)
+--.-.|-+-.....+.++++||.||+-.
T Consensus 30 ~hkT~eGn~~tkpiNG~ififnP~TGqLf 58 (260)
T 3sbt_A 30 VHKTFEGNVATKAINGCIFTLNPKTGHLF 58 (260)
T ss_dssp EEECTTSCEEEEEECEEEEEECTTTCEEE
T ss_pred EEeccCCCceeccccceEEEEeCCCCcEE
Confidence 33344455544444567888999999854
No 46
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=24.93 E-value=1.9e+02 Score=20.70 Aligned_cols=70 Identities=11% Similarity=0.116 Sum_probs=39.4
Q ss_pred cccceEEeecCCCcEEEEcCCCcceeecCCCCCCCCCccceeeeEEcccCCCCCeEEEEEEEEeeCCCCccEEEEEECCC
Q 037535 107 SCNGLIALKNDENGIAFWNPSTKEHLILPKYWGDLKDKVYMVVDGFGYDAVNDDYKVVRLVHFVRENVEYTEVSVYSLRT 186 (216)
Q Consensus 107 s~~Gll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~vyss~t 186 (216)
+.+|.++.....+.+.+||..+++....-..... ....+.+.+... ++... ....+.+|+..+
T Consensus 234 ~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~-------~i~~~~~~~~~~---~~~~~-------~dg~i~iw~~~~ 296 (313)
T 3odt_A 234 LPNGDIVSCGEDRTVRIWSKENGSLKQVITLPAI-------SIWSVDCMSNGD---IIVGS-------SDNLVRIFSQEK 296 (313)
T ss_dssp CTTSCEEEEETTSEEEEECTTTCCEEEEEECSSS-------CEEEEEECTTSC---EEEEE-------TTSCEEEEESCG
T ss_pred ecCCCEEEEecCCEEEEEECCCCceeEEEeccCc-------eEEEEEEccCCC---EEEEe-------CCCcEEEEeCCC
Confidence 3455555555677899999988875543221111 133444555332 44321 356789999988
Q ss_pred CcEEEec
Q 037535 187 NSWRRIR 193 (216)
Q Consensus 187 ~~W~~~~ 193 (216)
+.+....
T Consensus 297 ~~~~~~~ 303 (313)
T 3odt_A 297 SRWASED 303 (313)
T ss_dssp GGCCC--
T ss_pred Cceeehh
Confidence 8775443
No 47
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=24.58 E-value=3.2e+02 Score=23.13 Aligned_cols=67 Identities=12% Similarity=0.033 Sum_probs=38.6
Q ss_pred ecccceEEeec-CCCcEEEEcCCCcceeecCCCCCCCCCccceeeeEEcccCCCCCeEEEEEEEEeeCCCCccEEEEEEC
Q 037535 106 DSCNGLIALKN-DENGIAFWNPSTKEHLILPKYWGDLKDKVYMVVDGFGYDAVNDDYKVVRLVHFVRENVEYTEVSVYSL 184 (216)
Q Consensus 106 ~s~~Gll~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~vyss 184 (216)
+..+|.|.+.+ ....+..+++-.+....+-..... ...++++|..++ +|+... .....+++++.
T Consensus 45 d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~-------~P~GlAvD~~~~--~LY~tD------~~~~~I~v~~~ 109 (628)
T 4a0p_A 45 DVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLD-------YPEGMAVDWLGK--NLYWAD------TGTNRIEVSKL 109 (628)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS-------CCCEEEEETTTT--EEEEEE------TTTTEEEEEET
T ss_pred ECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCC-------CcceEEEEeCCC--EEEEEE------CCCCEEEEEec
Confidence 44577887775 456788888776544443222211 234677777655 555542 13457788877
Q ss_pred CCC
Q 037535 185 RTN 187 (216)
Q Consensus 185 ~t~ 187 (216)
.++
T Consensus 110 dG~ 112 (628)
T 4a0p_A 110 DGQ 112 (628)
T ss_dssp TST
T ss_pred CCC
Confidence 654
No 48
>3syx_A Sprouty-related, EVH1 domain-containing protein 1; WH1 domain, human sprouty-related, EVH1 domain-containing PR Q7Z699; 2.45A {Homo sapiens}
Probab=24.44 E-value=1.3e+02 Score=19.83 Aligned_cols=17 Identities=18% Similarity=0.028 Sum_probs=13.3
Q ss_pred CcEEEEcCCCcceeecC
Q 037535 119 NGIAFWNPSTKEHLILP 135 (216)
Q Consensus 119 ~~~~V~NP~T~~~~~LP 135 (216)
-.+.+.||.|+.|..+-
T Consensus 18 A~Vm~~Dd~tk~WlP~g 34 (130)
T 3syx_A 18 AVVMTRDDSSGGWLPLG 34 (130)
T ss_dssp EEEEEECSSSSCEEESS
T ss_pred EEeeeEcCCCCceEeCC
Confidence 36888999999977553
No 49
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=23.81 E-value=2.2e+02 Score=21.25 Aligned_cols=54 Identities=19% Similarity=0.168 Sum_probs=32.1
Q ss_pred cccceEEeec-CCCcEEEEcCCCcceee---cCCCCCCC--CCccceeeeEEcccCCCCC
Q 037535 107 SCNGLIALKN-DENGIAFWNPSTKEHLI---LPKYWGDL--KDKVYMVVDGFGYDAVNDD 160 (216)
Q Consensus 107 s~~Gll~~~~-~~~~~~V~NP~T~~~~~---LP~~~~~~--~~~~~~~~~~~~~d~~~~~ 160 (216)
..+|.|.... ....++++||.|++... ++...... ........-++++|+.++.
T Consensus 179 ~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~ 238 (262)
T 3nol_A 179 WVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHR 238 (262)
T ss_dssp EETTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTE
T ss_pred EECCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCE
Confidence 3477765543 56799999999998653 33221110 0011124678999997763
No 50
>1rmk_A MU-O-conotoxin mrvib; beta sheet, cystine knot; NMR {Conus marmoreus} SCOP: g.3.6.1
Probab=22.83 E-value=12 Score=17.66 Aligned_cols=12 Identities=33% Similarity=0.614 Sum_probs=9.3
Q ss_pred EEecccceEEee
Q 037535 104 IIDSCNGLIALK 115 (216)
Q Consensus 104 ~~~s~~Gll~~~ 115 (216)
++.+|.||+|..
T Consensus 16 ~i~CC~GLIC~~ 27 (31)
T 1rmk_A 16 FVYCCPGLICGP 27 (31)
T ss_dssp CCEESTTCCBCS
T ss_pred EEEecCCceEee
Confidence 667899998863
No 51
>2agh_C Zinc finger protein HRX; transcription; NMR {Homo sapiens}
Probab=22.63 E-value=54 Score=15.12 Aligned_cols=15 Identities=40% Similarity=0.536 Sum_probs=12.4
Q ss_pred CCCHHHHHHHHhcCC
Q 037535 3 SLPTDIKIDILSRLP 17 (216)
Q Consensus 3 ~LP~Dll~eIl~rLp 17 (216)
-||.|++.-+|..-|
T Consensus 6 ilpsdimdfvlkntp 20 (31)
T 2agh_C 6 ILPSDIMDFVLKNTP 20 (31)
T ss_dssp SSCHHHHHHHHHHSC
T ss_pred cChHHHHHHHHhCCh
Confidence 389999998887777
No 52
>3rhi_A DNA-binding protein HU; structural genomics, center for structural genom infectious diseases, csgid; 2.48A {Bacillus anthracis} SCOP: a.55.1.1 PDB: 1hue_A 1huu_A
Probab=22.11 E-value=35 Score=20.89 Aligned_cols=15 Identities=27% Similarity=0.322 Sum_probs=12.6
Q ss_pred EEEcCCCcceeecCC
Q 037535 122 AFWNPSTKEHLILPK 136 (216)
Q Consensus 122 ~V~NP~T~~~~~LP~ 136 (216)
..-||.||+...+|+
T Consensus 62 ~grNP~Tge~i~ipa 76 (93)
T 3rhi_A 62 TGRNPQTGEEMQIAA 76 (93)
T ss_dssp EEECTTTSCEEEECC
T ss_pred eeeCCCCCCEEEecC
Confidence 356999999999975
No 53
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=21.19 E-value=41 Score=20.34 Aligned_cols=28 Identities=7% Similarity=0.030 Sum_probs=17.3
Q ss_pred HHHHHHHHhcCCccchhhhccccHhhhh
Q 037535 6 TDIKIDILSRLPVKSLLRFKCMSKSFCS 33 (216)
Q Consensus 6 ~Dll~eIl~rLp~~sl~r~r~VcK~W~~ 33 (216)
+.++..+...+.++.++..-.+|+.+|.
T Consensus 59 ~~ii~~l~~~~~P~~iC~~l~lC~~~~~ 86 (91)
T 2qyp_A 59 SSILSILLEEVSPELVCSMLHLCSGTRH 86 (91)
T ss_dssp HHHHHHHHHTCCHHHHHHTTTCC-----
T ss_pred HHHHHHHHHcCCHHHHHhhcCCCCCccc
Confidence 3466677777888888888888888774
No 54
>2lh0_A Histone chaperone RTT106; chromosomal protein, nucleus, phosphoprotein, transcription, transcription regulation, transposition; NMR {Saccharomyces cerevisiae}
Probab=21.18 E-value=35 Score=19.91 Aligned_cols=29 Identities=24% Similarity=0.227 Sum_probs=18.5
Q ss_pred CCCCHHHHHHHHhcCC--ccchhhhccccHh
Q 037535 2 ASLPTDIKIDILSRLP--VKSLLRFKCMSKS 30 (216)
Q Consensus 2 ~~LP~Dll~eIl~rLp--~~sl~r~r~VcK~ 30 (216)
+.||.||..+|..=+- +.++--|..|+..
T Consensus 10 ~~LP~~Lq~kV~aIV~~~PsSl~VF~~Ly~y 40 (70)
T 2lh0_A 10 DELPESLSRKIGTVVRVLPSSLEIFEELYKY 40 (70)
T ss_dssp GGSCHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHhCccHHHHHHHHHHH
Confidence 5689999987765443 4455555555543
No 55
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=20.55 E-value=3.1e+02 Score=21.45 Aligned_cols=31 Identities=10% Similarity=0.212 Sum_probs=16.9
Q ss_pred eeEEcccCCCCCeEEEEEEEEeeCCCCccEEEEEECCCC
Q 037535 149 VDGFGYDAVNDDYKVVRLVHFVRENVEYTEVSVYSLRTN 187 (216)
Q Consensus 149 ~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~vyss~t~ 187 (216)
-.++.+|+..+ +|..+. .....+++++....
T Consensus 248 P~glavd~~~~--~lY~aD------~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 248 PNGITLDLLSG--RLYWVD------SKLHSISSIDVNGG 278 (400)
T ss_dssp EEEEEEETTTT--EEEEEE------TTTTEEEEEETTSC
T ss_pred eEEEEEEeCCC--EEEEEE------CCCCEEEEEeCCCC
Confidence 34566665544 444442 23456777777553
No 56
>1qc6_A EVH1 domain from ENA/VAsp-like protein; AN incomplete seven stranded anti-parallel beta barrel closed by AN alpha helix, EVH1 domain; 2.60A {Mus musculus} SCOP: b.55.1.4
Probab=20.03 E-value=1.9e+02 Score=18.83 Aligned_cols=42 Identities=7% Similarity=0.110 Sum_probs=23.9
Q ss_pred CcEEEEcCCCcceeecCCCCCCCCCccceeeeEEcccCCCCCeEEEEE
Q 037535 119 NGIAFWNPSTKEHLILPKYWGDLKDKVYMVVDGFGYDAVNDDYKVVRL 166 (216)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykvv~~ 166 (216)
-.+++++|.+++|...-.-.. ......+-.++.+..|+|+.+
T Consensus 11 A~V~~~d~~~~~W~~~g~G~~------~l~~V~i~~~~~~~~~Riv~~ 52 (130)
T 1qc6_A 11 ASVMVYDDTSKKWVPIKPGQQ------GFSRINIYHNTASSTFRVVGV 52 (130)
T ss_dssp EEEEEEETTTTEEEECC-----------CEEEEEEEETTTTEEEEEEE
T ss_pred EEEEEECCCCCceeECCCCce------eeeEEEEEecCCCcEEEEEEE
Confidence 468889999999874421100 001223334556777888876
Done!